# newdoc id = events.txt # newpar # sent_id = 1 # text = Decreased IL-12 production and Th1 cell development by acetyl salicylic acid-mediated inhibition of NF-kappaB. 1 Decreased Decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 12 12 NUM CD NumType=Card _ _ _ _ 5 production production NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 Th1 th1 NUM CD NumType=Card _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 development development NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 acetyl acetyl ADJ JJ Degree=Pos _ _ _ _ 12 salicylic salicylic ADJ JJ Degree=Pos _ _ _ _ 13 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2 # text = IL-12 is a 75-kDa heterodimeric cytokine composed of two covalently linked p35 and p40 chains. 1 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 12 12 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 75 75 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kDa kDa NOUN NN Number=Sing _ _ _ _ 9 heterodimeric heterodimeric ADJ JJ Degree=Pos _ _ _ _ 10 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 11 composed compose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 two two NUM CD NumType=Card _ _ _ _ 14 covalently covalently ADV RB _ _ _ _ _ 15 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 p35 p35 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 p40 p40 NUM CD NumType=Card _ _ _ _ 19 chains chain NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3 # text = This pro-inflammatory cytokine plays a prominent role in the development of Th1 cell-mediated immune responses. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 pro-inflammatory pro-inflammatory ADJ JJ Degree=Pos _ _ _ _ 3 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 4 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 prominent prominent ADJ JJ Degree=Pos _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 development development NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 Th1 Th1 NUM CD NumType=Card _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 immune immune ADJ JJ Degree=Pos _ _ _ _ 17 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4 # text = Th1 cell-mediated immune responses have been implicated in the pathogenesis of chronic inflammatory autoimmune diseases. 1 Th1 Th1 NUM CD NumType=Card _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 immune immune ADJ JJ Degree=Pos _ _ _ _ 6 responses response NOUN NNS Number=Plur _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 9 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 15 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 16 autoimmune autoimmune NOUN NN Number=Sing _ _ _ _ 17 diseases disease NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 5 # text = Thus, IL-12 appears to be a critical factor in the generation and maintenance of chronic inflammatory conditions. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 12 12 NUM CD NumType=Card _ _ _ _ 6 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 critical critical ADJ JJ Degree=Pos _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 generation generation NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 maintenance maintenance NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 19 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 20 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 6 # text = In this study, we investigated the effects of a commonly prescribed anti-inflammatory drug, acetyl salicylic acid (ASA), on IL-12 production and Th1 cell development. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 effects effect NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 commonly commonly ADV RB _ _ _ _ _ 12 prescribed prescri VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 14 drug drug NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 acetyl acetyl ADJ JJ Degree=Pos _ _ _ _ 17 salicylic salicylic ADJ JJ Degree=Pos _ _ _ _ 18 acid acid NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 ASA ASA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 on on ADP IN _ _ _ _ _ 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 12 12 NUM CD NumType=Card _ _ _ _ 27 production production NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 Th1 th1 NUM CD NumType=Card _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 7 # text = ASA was found to inhibit secretion of the IL-12 heterodimer as well as p40 monomer by human monocytic cells. 1 ASA ASa PROPN NNP Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 6 secretion secretion NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 12 12 NUM CD NumType=Card _ _ _ _ 12 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 13 as as ADV RB _ _ _ _ _ 14 well well ADV RB Degree=Pos _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 p40 p40 NUM CD NumType=Card _ _ _ _ 17 monomer monomer NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 8 # text = This was associated with the down-regulation of IL-12p40 mRNA expression. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 down down NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 regulation regulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 12p40 12p40 NUM CD NumType=Card _ _ _ _ 13 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 9 # text = Analysis of the regulation of the p40 gene promoter revealed that ASA inhibited NF-kappaB activation and binding to the p40-kappaB site in the p40 promoter, leading to transcriptional repression of the p40 gene. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 p40 p40 NUM CD NumType=Card _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 ASA ASA PROPN NNP Number=Sing _ _ _ _ 13 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 p40 p40 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 -kappaB -kappab NOUN NN Number=Sing _ _ _ _ 24 site site NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 p40 p40 NOUN NN Number=Sing _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 leading lead VERB VBG VerbForm=Ger _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 33 repression repression NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 p40 p40 NOUN NN Number=Sing _ _ _ _ 37 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 10 # text = Addition of ASA to an in vitro T helper cell differentiation system, at concentrations compatible with plasma levels reached during anti-inflammatory therapy, resulted in reduced development of Th1 cells. 1 Addition Addition PROPN NNP Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 ASA ASA PROPN NNP Number=Sing _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 8 T T PROPN NNP Number=Sing _ _ _ _ 9 helper helper NOUN NN Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 12 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 at at ADP IN _ _ _ _ _ 15 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 16 compatible compatible ADJ JJ Degree=Pos _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 plasma plasma NOUN NN Number=Sing _ _ _ _ 19 levels level NOUN NNS Number=Plur _ _ _ _ 20 reached reach VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 during during ADP IN _ _ _ _ _ 22 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 23 therapy therapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 development development NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 Th1 Th1 NUM CD NumType=Card _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 11 # text = These results suggest that the inhibition of NF-kappaB activation by ASA leads to down-regulation of IL-12 production and inhibition of Th1 cell development. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 ASA ASa PROPN NNP Number=Sing _ _ _ _ 14 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 down down ADV RB _ _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 regulation regulation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 12 12 NUM CD NumType=Card _ _ _ _ 23 production production NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 Th1 Th1 NUM CD NumType=Card _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12 # text = Document 0030020 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030020 0030020 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 13 # text = NF-kappa B controls expression of inhibitor 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 controls controls NOUN NN Number=Sing _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ # sent_id = 14 # text = I kappa 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 15 # text = B alpha: 1 B b NOUN NN Number=Sing _ _ _ _ 2 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 : : PUNCT : _ _ _ _ _ # sent_id = 16 # text = evidence for an inducible autoregulatory pathway. 1 evidence evidence NOUN NN Number=Sing _ _ _ _ 2 for for ADP IN _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 5 autoregulatory autoregulatory ADJ JJ Degree=Pos _ _ _ _ 6 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 17 # text = The eukaryotic transcription factor nuclear factor-kappa B (NF-kappa B) participates in many parts of the genetic program mediating T lymphocyte activation and growth. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 eukaryotic eukaryotic ADJ JJ Degree=Pos _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 participates participate NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 many many ADJ JJ Degree=Pos _ _ _ _ 19 parts part NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 23 program program NOUN NN Number=Sing _ _ _ _ 24 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 18 # text = Nuclear expression of NF-kappa B occurs after its induced dissociation from its cytoplasmic inhibitor 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B b PROPN NNP Number=Sing _ _ _ _ 8 occurs occur VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 after after ADP IN _ _ _ _ _ 10 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 dissociation dissociation NOUN NN Number=Sing _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 16 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ # sent_id = 19 # text = I kappa B alpha. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa X FW Foreign=Yes _ _ _ _ 3 B b ADJ JJ Degree=Pos _ _ _ _ 4 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 . . PUNCT . _ _ _ _ _ # sent_id = 20 # text = Phorbol ester and tumor necrosis factor-alpha induction of nuclear NF-kappa B is associated with both the degradation of performed I kappa B alpha and the activation of I kappa B alpha gene expression. 1 Phorbol Phorbol NOUN NN Number=Sing _ _ _ _ 2 ester ester NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 tumor tumor NOUN NN Number=Sing _ _ _ _ 5 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 -alpha -alpha NOUN NN Number=Sing _ _ _ _ 8 induction induction NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ 14 B b PROPN NNP Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 both both CCONJ CC _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 degradation degradation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 performed perform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ 25 B b PROPN NNP Number=Sing _ _ _ _ 26 alpha alpha PROPN NNP Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 32 kappa kappa PROPN NNP Number=Sing _ _ _ _ 33 B B PROPN NNP Number=Sing _ _ _ _ 34 alpha alpha ADV RB _ _ _ _ _ 35 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 21 # text = Transfection studies indicate that the I kappa B alpha gene is specifically induced by the 65-kilodalton transactivating subunit of NF-kappa B. 1 Transfection Transfection NOUN NN Number=Sing _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 kappa kappa X GW _ _ _ _ _ 8 B b X GW _ _ _ _ _ 9 alpha alpha X GW _ _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 specifically specifically ADV RB _ _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 65 65 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kilodalton kilodalton NOUN NN Number=Sing _ _ _ _ 19 transactivating transactivat VERB VBG VerbForm=Ger _ _ _ _ 20 subunit subunit NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ 25 B. B. PROPN NNP Number=Sing _ _ _ _ # sent_id = 22 # text = Association of the newly synthesized I kappa B alpha with p65 restores intracellular inhibition of NF-kappa B DNA binding activity and prolongs the survival of this labile inhibitor. 1 Association Association NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 newly newly ADV RB _ _ _ _ _ 5 synthesized synthesize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 kappa kappa X FW Foreign=Yes _ _ _ _ 8 B b ADJ JJ Degree=Pos _ _ _ _ 9 alpha alpha NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 p65 p65 NUM CD NumType=Card _ _ _ _ 12 restores restore NOUN NNS Number=Plur _ _ _ _ 13 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 14 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ _ 20 DNA dna NOUN NN Number=Sing _ _ _ _ 21 binding binde VERB VBG VerbForm=Ger _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 prolongs prolong VERB VB VerbForm=Inf _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 survival survival NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 29 labile labile NOUN NN Number=Sing _ _ _ _ 30 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 23 # text = Together, these results show that NF-kappa B controls the expression of I kappa B alpha by means of an inducible autoregulatory pathway. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B b PROPN NNP Number=Sing _ _ _ _ 11 controls control VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 kappa kappa PROPN NNP Number=Sing _ _ _ _ 17 B b PROPN NNP Number=Sing _ _ _ _ 18 alpha alpha ADV RB _ _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 means means NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 24 autoregulatory autoregulatory ADJ JJ Degree=Pos _ _ _ _ 25 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 24 # text = Document 00300212 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300212 00300212 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 25 # text = Activation of the NF-kappaB transcription factor in a T-lymphocytic cell line by hypochlorous acid. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 lymphocytic lymphocytic ADJ JJ Degree=Pos _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 line line NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 hypochlorous hypochlorous ADJ JJ Degree=Pos _ _ _ _ 17 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 26 # text = Reactive oxygen species (ROS) such as hydrogen peroxide serve as second messengers in the induction of the transcription factor NF-kappaB, and hence in the activation and replication of human immunodeficiency virus type 1 (HIV-1) in human cells. 1 Reactive Reactive ADJ JJ Degree=Pos _ _ _ _ 2 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 3 species species NOUN NNS Number=Plur _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 ROS Ro NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 such such ADJ JJ Degree=Pos _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 hydrogen hydrogen NUM CD NumType=Card _ _ _ _ 10 peroxide peroxide NOUN NN Number=Sing _ _ _ _ 11 serve serve VERB VB VerbForm=Inf _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 14 messengers messenger NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 induction induction NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 hence hence ADV RB _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 replication replication NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 human human ADJ JJ Degree=Pos _ _ _ _ 35 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 36 virus virus NOUN NN Number=Sing _ _ _ _ 37 type type NOUN NN Number=Sing _ _ _ _ 38 1 1 NUM CD NumType=Card _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 1 1 X LS _ _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 human human ADJ JJ Degree=Pos _ _ _ _ 46 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 27 # text = During inflammatory reactions, many oxidative species are produced, one of which is hypochlorous acid (HOCl), which is responsible for the microbicidal effects of activated human polymorphonuclear leukocytes. 1 During during ADP IN _ _ _ _ _ 2 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 3 reactions reaction NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 many many ADJ JJ Degree=Pos _ _ _ _ 6 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 7 species species NOUN NNS Number=Plur _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 produced produce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 one one NUM CD NumType=Card _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 which which PRON WDT PronType=Int _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 hypochlorous hypochlorous ADV RB _ _ _ _ _ 16 acid acid VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 HOCl HOCl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 microbicidal microbicidal ADJ JJ Degree=Pos _ _ _ _ 27 effects effect NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 polymorphonuclear polymorphonuclear NOUN NN Number=Sing _ _ _ _ 32 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 28 # text = Treatment of a T-lymphocytic cell line with micromolar concentrations of 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 lymphocytic lymphocytic ADJ JJ Degree=Pos _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 line line NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 micromolar micromolar ADJ JJ Degree=Pos _ _ _ _ 10 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ # sent_id = 29 # text = HOCl promoted the appearance of transcription factor NF-kappaB (the heterodimer p50/p65) in the nucleus of the cells, even in the absence of de novo protein synthesis. 1 HOCl HOCl PROPN NNP Number=Sing _ _ _ _ 2 promoted promote VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 appearance appearance NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 14 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 even even ADV RB _ _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 absence absence NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 de de NOUN NN Number=Sing _ _ _ _ 31 novo novo NOUN NN Number=Sing _ _ _ _ 32 protein protein NOUN NN Number=Sing _ _ _ _ 33 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 30 # text = Western blot analysis of the NF-kappaB inhibitory subunits (IkappaB) demonstrated that both IkappaB-alpha proteolysis and p105 processing were induced by the treatment. 1 Western western ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 10 subunits subunit NOUN NNS Number=Plur _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 both both DET DT _ _ _ _ _ 17 IkappaB Ikappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 alpha alpha NOUN NN Number=Sing _ _ _ _ 20 proteolysis proteolysis NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 p105 p105 NUM CD NumType=Card _ _ _ _ 23 processing processing NOUN NN Number=Sing _ _ _ _ 24 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 31 # text = NF-kappaB activation was very effective when cells were subjected to hyperthermia before being treated with HOCl. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 very very ADV RB _ _ _ _ _ 7 effective effective ADJ JJ Degree=Pos _ _ _ _ 8 when when ADV WRB PronType=Int _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 subjected subject VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 hyperthermia hyperthermia NOUN NN Number=Sing _ _ _ _ 14 before before SCONJ IN _ _ _ _ _ 15 being be AUX VBG VerbForm=Ger _ _ _ _ 16 treated treat VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 HOCl HOCl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 32 # text = Various antioxidants, such as pyrrolidine dithiocarbamate, p-bromophenacyl-bromide and nordihydroguaiaretic acid could strongly reduce NF-kappaB translocation, demonstrating the importance of oxidative species in the transduction mechanism. 1 Various various ADJ JJ Degree=Pos _ _ _ _ 2 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 such such ADJ JJ Degree=Pos _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 pyrrolidine pyrrolidine ADJ JJ Degree=Pos _ _ _ _ 7 dithiocarbamate dithiocarbamate NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 p-bromophenacyl-bromide p-bromophenacyl-bromide ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 nordihydroguaiaretic nordihydroguaiaretic ADJ JJ Degree=Pos _ _ _ _ 12 acid acid NOUN NN Number=Sing _ _ _ _ 13 could could AUX MD VerbForm=Fin _ _ _ _ 14 strongly strongly ADV RB _ _ _ _ _ 15 reduce reduce VERB VB VerbForm=Inf _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 19 translocation translocation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 demonstrating demonstrat VERB VBG VerbForm=Ger _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 importance importance NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 26 species species NOUN NNS Number=Plur _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 transduction transduction NOUN NN Number=Sing _ _ _ _ 30 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 33 # text = Moreover, ACH-2 cells treated with HOCl or H2O2 released tumour necrosis factor-alpha (TNF-alpha) in the supernatants. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 ACH ACH DET DT _ _ _ _ SpaceAfter=No 4 - - SYM SYM _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 HOCl HOCl PROPN NNP Number=Sing _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 H2O2 H2O2 PART TO Abbr=Yes _ _ _ _ 12 released release VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 tumour tumour NOUN NN Number=Sing _ _ _ _ 14 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 alpha alpha NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 supernatants supernatant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 34 # text = The importance of TNF-alpha release in NF-kappaB induction by HOCl or H2O2 was demonstrated by the fact that: (1) the nuclear appearance of NF-kappaB was promoted in untreated cells; and (2) synergism between TNF-alpha and HOCl was detected. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 importance importance NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 release release NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 HOCl HOCl PROPN NNP Number=Sing _ _ _ _ 15 or or CCONJ CC _ _ _ _ _ 16 H2O2 H2O2 NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 fact fact NOUN NN Number=Sing _ _ _ _ 22 that that SCONJ IN _ _ _ _ SpaceAfter=No 23 : : PUNCT : _ _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 1 1 X LS _ _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 29 appearance appearance NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 34 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 35 promoted promote VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 untreated untreated ADJ JJ Degree=Pos _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 ; ; PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 2 2 X LS _ _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ _ 44 synergism synergism NOUN NN Number=Sing _ _ _ _ 45 between between ADP IN _ _ _ _ _ 46 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 alpha alpha PROPN NNP Number=Sing _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 HOCl HOCl PROPN NNP Number=Sing _ _ _ _ 51 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 52 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 35 # text = Collectively, these results suggest that HOCl should be considered as an oxidative species capable of inducing NF-kappaB in a T-lymphocytic cell line through a transduction mechanism involving ROS, and having a long-distance effect through subsequent TNF-alpha release. 1 Collectively collectively ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 HOCl HOCl PROPN NNP Number=Sing _ _ _ _ 8 should should AUX MD VerbForm=Fin _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 considered consider VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 14 species species NOUN NNS Number=Plur _ _ _ _ 15 capable capable ADJ JJ Degree=Pos _ _ _ _ 16 of of SCONJ IN _ _ _ _ _ 17 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 lymphocytic lymphocytic ADJ JJ Degree=Pos _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 line line NOUN NN Number=Sing _ _ _ _ 27 through through ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 transduction transduction NOUN NN Number=Sing _ _ _ _ 30 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 31 involving involve VERB VBG VerbForm=Ger _ _ _ _ 32 ROS Ro NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 having have VERB VBG VerbForm=Ger _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 distance distance NOUN NN Number=Sing _ _ _ _ 40 effect effect NOUN NN Number=Sing _ _ _ _ 41 through through ADP IN _ _ _ _ _ 42 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 43 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 alpha alpha NOUN NN Number=Sing _ _ _ _ 46 release release NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 36 # text = Document 00300215 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300215 00300215 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 37 # text = Human interferon regulatory factor 2 gene. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 interferon interferon ADP IN _ _ _ _ _ 3 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 2 2 NUM CD NumType=Card _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ _ # sent_id = 38 # text = Intron-exon organization and functional analysis of 5'-flanking region. 1 Intron-exon Intron-exon ADP IN _ _ _ _ _ 2 organization organization NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 functional functional ADJ JJ Degree=Pos _ _ _ _ 5 analysis analysis NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 flanking flanking VERB VBG VerbForm=Ger _ _ _ _ 11 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 39 # text = Interferon regulatory factor 2 (IRF-2) is a transcriptional regulatory protein that terminates interferon beta expression initiated by interferon regulatory factor 1 Interferon Interferon PROPN NNP Number=Sing _ _ _ _ 2 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 2 2 NUM CD NumType=Card _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 IRF Irf NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 13 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 terminates terminate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 interferon interferon ADP IN _ _ _ _ _ 18 beta beta NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 initiated initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 interferon interferon ADJ JJ Degree=Pos _ _ _ _ 23 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ # sent_id = 40 # text = 1. 1 1 1 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ # sent_id = 41 # text = In this study, we isolated the genomic DNA for human IRF-2 gene, determined the intron-exon structure of the human IRF-2 gene, mapped the major transcription initiation site, identified a number of potential regulatory elements in the 5'-flanking region, and localized the IRF-2 gene on human chromosome 4. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 isolated isolate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 9 DNA dna NOUN NN Number=Sing _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 determined determine VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 intron intron NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 exon exon NOUN NN Number=Sing _ _ _ _ 22 structure structure NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 IRF Irf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ _ 29 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 mapped map VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 major major ADJ JJ Degree=Pos _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ _ 35 initiation initiation NOUN NN Number=Sing _ _ _ _ 36 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 number number NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 potential potential ADJ JJ Degree=Pos _ _ _ _ 43 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 44 elements element NOUN NNS Number=Plur _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 51 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 and and CCONJ CC _ _ _ _ _ 54 localized localize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 55 the the DET DT Definite=Def|PronType=Art _ _ _ _ 56 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 2 2 NUM CD NumType=Card _ _ _ _ 59 gene gene NOUN NN Number=Sing _ _ _ _ 60 on on ADP IN _ _ _ _ _ 61 human human ADJ JJ Degree=Pos _ _ _ _ 62 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 63 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 64 . . PUNCT . _ _ _ _ _ # sent_id = 42 # text = The IRF-2 promoter region contains a CpG island, with several GC boxes, a putative NF-kappa B-binding site, and a CAAT box, but no TATA box. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 IRF IRF NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ _ 6 region region NOUN NN Number=Sing _ _ _ _ 7 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 CpG CpG PROPN NNP Number=Sing _ _ _ _ 10 island island NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 several several ADJ JJ Degree=Pos _ _ _ _ 14 GC Gc NOUN NN Number=Sing _ _ _ _ 15 boxes box NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 putative putative ADJ JJ Degree=Pos _ _ _ _ 19 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa NOUN NN Number=Sing _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 binding binding VERB VBG VerbForm=Ger _ _ _ _ 25 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 CAAT Caat NOUN NN Number=Sing _ _ _ _ 30 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 but but CCONJ CC _ _ _ _ _ 33 no no DET DT _ _ _ _ _ 34 TATA TATa NOUN NN Number=Sing _ _ _ _ 35 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 43 # text = When the promoter region was linked with a heterologous reporter gene, we found that the promoter region is inducible by both interferons (interferon-alpha and -gamma) and interferon regulatory factor 1 When when ADV WRB PronType=Int _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 promoter promoter NOUN NN Number=Sing _ _ _ _ 4 region region NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 linked link VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 10 reporter reporter NOUN NN Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 region region NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 both both CCONJ CC _ _ _ _ _ 23 interferons interferon NOUN NNS Number=Plur _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 alpha alpha NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 interferon interferon ADP IN _ _ _ _ _ 34 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ _ # sent_id = 44 # text = 1. 1 1 1 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ # sent_id = 45 # text = The region which induced these inductions was identified as being confined to 40 nucleotides 5' to the major transcriptional initiation site by testing a series of clones with truncated promoter of IRF-2. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 region region NOUN NN Number=Sing _ _ _ _ 3 which which PRON WDT PronType=Rel _ _ _ _ 4 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 inductions induction NOUN NNS Number=Plur _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 as as SCONJ IN _ _ _ _ _ 10 being be AUX VBG VerbForm=Ger _ _ _ _ 11 confined confine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 40 40 NUM CD NumType=Card _ _ _ _ 14 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 15 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ' ' NOUN NNS Number=Plur _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 major major ADJ JJ Degree=Pos _ _ _ _ 20 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 21 initiation initiation NOUN NN Number=Sing _ _ _ _ 22 site site NOUN NN Number=Sing _ _ _ _ 23 by by SCONJ IN _ _ _ _ _ 24 testing teste VERB VBG VerbForm=Ger _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 series series NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 clones clone NOUN NNS Number=Plur _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 truncated truncate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 promoter promoter NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 46 # text = This region contains elements which are shared with the transcriptional enhancers of other genes including interferon regulatory factor 1, interferon beta, and interferon-inducible genes. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 region region NOUN NN Number=Sing _ _ _ _ 3 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 elements element NOUN NNS Number=Plur _ _ _ _ 5 which which PRON WDT PronType=Rel _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 shared share VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 enhancers enhancer NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 other other ADJ JJ Degree=Pos _ _ _ _ 14 genes gene NOUN NNS Number=Plur _ _ _ _ 15 including include VERB VBG VerbForm=Ger _ _ _ _ 16 interferon interferon ADP IN _ _ _ _ _ 17 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 interferon interferon ADP IN _ _ _ _ _ 22 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 interferon interferon ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 28 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 47 # text = These data suggest that interferon regulatory factor 1 not only triggers the activation of the interferon signal transduction pathway, but also may play a role in limiting the duration of this response by activating the transcription of IRF-2. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 interferon interferon ADP IN _ _ _ _ _ 6 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 1 1 NUM CD NumType=Card _ _ _ _ 9 not not ADV RB _ _ _ _ _ 10 only only ADV RB _ _ _ _ _ 11 triggers trigger VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 interferon interferon ADJ JJ Degree=Pos _ _ _ _ 17 signal signal NOUN NN Number=Sing _ _ _ _ 18 transduction transduction NOUN NN Number=Sing _ _ _ _ 19 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 but but CCONJ CC _ _ _ _ _ 22 also also ADV RB _ _ _ _ _ 23 may may AUX MD VerbForm=Fin _ _ _ _ 24 play play VERB VB VerbForm=Inf _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 role role NOUN NN Number=Sing _ _ _ _ 27 in in SCONJ IN _ _ _ _ _ 28 limiting limite VERB VBG VerbForm=Ger _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 duration duration NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 33 response response NOUN NN Number=Sing _ _ _ _ 34 by by SCONJ IN _ _ _ _ _ 35 activating activate VERB VBG VerbForm=Ger _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 transcription transcription NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 48 # text = Document 00300221 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300221 00300221 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 49 # text = IL-10 inhibits nuclear factor-kappa B/Rel nuclear activity in CD3-stimulated human peripheral T lymphocytes. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 Rel Rel PROPN NNP Number=Sing _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 CD3 CD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT : _ _ _ _ SpaceAfter=No 17 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 50 # text = IL-10 markedly reduces nuclear factor (NF)-kappa B/Rel nuclear activity induced in PBMC by stimulation with the anti-CD3 mAb OKT3. 1 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - SYM SYM _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 markedly markedly ADV RB _ _ _ _ _ 5 reduces reduce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 - - PUNCT : _ _ _ _ SpaceAfter=No 12 kappa kappa PROPN NNP Number=Sing _ _ _ _ 13 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 Rel Rel PROPN NNP Number=Sing _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 PBMC PBMC PROPN NNP Number=Sing _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 anti-CD3 anti-CD3 NOUN NN Number=Sing _ _ _ _ 26 mAb mAb NOUN NN Number=Sing _ _ _ _ 27 OKT3 OKT3 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 51 # text = The inhibition is exerted specifically on the NF-kappa B/Rel activation induced by mAb OKT3, and not that produced by PMA. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 exerted exert VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 specifically specifically ADV RB _ _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 Rel Rel PROPN NNP Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 mAb mAb PROPN NNP Number=Sing _ _ _ _ 18 OKT3 OKT3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 not not ADV RB _ _ _ _ _ 22 that that SCONJ IN _ _ _ _ _ 23 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 52 # text = As judged by supershifting the DNA-protein complexes with Abs recognizing specific components of the NF-kappa B/Rel protein family, the p50/p65 (Rel A) heterodimeric form of NF-kappa B is primarily affected. 1 As as SCONJ IN _ _ _ _ _ 2 judged judge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 by by SCONJ IN _ _ _ _ _ 4 supershifting supershift VERB VBG VerbForm=Ger _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 complexes complex NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 Abs Abs PROPN NNPS Number=Plur _ _ _ _ 12 recognizing recognize VERB VBG VerbForm=Ger _ _ _ _ 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 components component NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa PROPN NNP Number=Sing _ _ _ _ 20 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 Rel Rel PROPN NNP Number=Sing _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ _ 24 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 / / PUNCT , _ _ _ _ SpaceAfter=No 29 p65 p65 NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 Rel Rel NOUN NN Number=Sing _ _ _ _ 32 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 heterodimeric heterodimeric ADJ JJ Degree=Pos _ _ _ _ 35 form form NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 kappa kappa PROPN NNP Number=Sing _ _ _ _ 40 B b PROPN NNP Number=Sing _ _ _ _ 41 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 42 primarily primarily ADV RB _ _ _ _ _ 43 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 53 # text = The maximal effect is observed at the IL-10 concentration of 20 U/ml. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 3 effect effect NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 at at ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 10 10 NUM CD NumType=Card _ _ _ _ 11 concentration concentration NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 20 20 NUM CD NumType=Card _ _ _ _ 14 U/ml u/ml PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 54 # text = IL-10 inhibitory activity is exerted on T lymphocytes and is mediated by monocytes. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 exerted exert VERB VBN Tense=Past|Typo=Yes|VerbForm=Part|Voice=Pass _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 55 # text = Indeed, monocytes pretreated with IL-10 are able so inhibit NF-kappa B nuclear activity in purified T lymphocytes stimulated with OKT3. 1 Indeed indeed ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 4 pretreated pretreate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 10 10 NUM CD NumType=Card _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 able able ADJ JJ Degree=Pos _ _ _ _ 11 so so ADV RB _ _ _ _ _ 12 inhibit inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B b PROPN NNP Number=Sing _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 purified purified ADJ JJ Degree=Pos _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 23 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 OKT3 OKT3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 56 # text = Soluble factors do not appear to be involved in the mechanism of inhibition. 1 Soluble Soluble ADJ JJ Degree=Pos _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 appear appear VERB VB VerbForm=Inf _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 involved involved ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 inhibition inhibition NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 57 # text = On the other hand, the up-regulation of CD80 1 On on ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 hand hand NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 up up ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 regulation regulation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 CD80 CD80 PROPN NNP Number=Sing _ _ _ _ # sent_id = 58 # text = Ag, found on monocytes obtained from PBMC incubated with OKT3, is not detected after addition of IL-10, and the anti-CD28 mAb CLB-CD28/1 restores the NF-kappa B/Rel nuclear activity in IL-10-inhibited lymphocytes. 1 Ag ag PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 6 obtained obtaine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 PBMC PBMC PROPN NNP Number=Sing _ _ _ _ 9 incubated incubate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 OKT3 OKT3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 after after ADP IN _ _ _ _ _ 17 addition addition NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 anti-CD28 anti-CD28 PROPN NNP Number=Sing _ _ _ _ 26 mAb mAb PROPN NNP Number=Sing _ _ _ _ 27 CLB CLB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 CD28/1 CD28/1 PROPN NNP Number=Sing _ _ _ _ 30 restores restore VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappa kappa PROPN NNP Number=Sing _ _ _ _ 35 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 / / PUNCT , _ _ _ _ SpaceAfter=No 37 Rel Rel PROPN NNP Number=Sing _ _ _ _ 38 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 39 activity activity NOUN NN Number=Sing _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 59 # text = Therefore, the NF-kappa B/Rel inhibition might be ascribed to a lack of cooperation between accessory cells and T lymphocytes, resulting from down-regulation of a costimulatory molecule, such as CD80, produced by IL-10 on activated monocytes. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 Rel Rel NOUN NN Number=Sing _ _ _ _ 10 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 11 might might AUX MD VerbForm=Fin _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 ascribed ascribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 lack lack NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 cooperation cooperation NOUN NN Number=Sing _ _ _ _ 19 between between ADP IN _ _ _ _ _ 20 accessory accessory ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 T t NOUN NN Number=Sing _ _ _ _ 24 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 resulting result VERB VBG VerbForm=Ger _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 down down ADV RB _ _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 regulation regulation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 34 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 such such ADJ JJ Degree=Pos _ _ _ _ 37 as as ADP IN _ _ _ _ _ 38 CD80 CD80 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 by by ADP IN _ _ _ _ _ 42 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT , _ _ _ _ SpaceAfter=No 44 10 10 NUM CD NumType=Card _ _ _ _ 45 on on ADP IN _ _ _ _ _ 46 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 60 # text = Our results demonstrate that IL-10 can inhibit the induction of NF-kappa B/Rel nuclear activity in CD3-stimulated T lymphocytes. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 10 10 NUM CD NumType=Card _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 induction induction NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 Rel Rel PROPN NNP Number=Sing _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 CD3 CD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT : _ _ _ _ SpaceAfter=No 24 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 61 # text = Since inappropriate activation of kappa B-driven genes has a physiopathologic role in a number of diseases, such as HIV infection, our findings support the possibility of using this cytokine to suppress an undesirable activation of these transcription factors. 1 Since since ADP IN _ _ _ _ _ 2 inappropriate inappropriate ADJ JJ Degree=Pos _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 genes gene NOUN NNS Number=Plur _ _ _ _ 10 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 physiopathologic physiopathologic ADJ JJ Degree=Pos _ _ _ _ 13 role role NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 number number NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 diseases disease NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 such such ADJ JJ Degree=Pos _ _ _ _ 21 as as ADP IN _ _ _ _ _ 22 HIV Hiv NOUN NN Number=Sing _ _ _ _ 23 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 26 findings finding NOUN NNS Number=Plur _ _ _ _ 27 support support VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 possibility possibility NOUN NN Number=Sing _ _ _ _ 30 of of SCONJ IN _ _ _ _ _ 31 using use VERB VBG VerbForm=Ger _ _ _ _ 32 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 33 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 34 to to PART TO _ _ _ _ _ 35 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 36 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 undesirable undesirable ADJ JJ Degree=Pos _ _ _ _ 38 activation activation NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 41 transcription transcription NOUN NN Number=Sing _ _ _ _ 42 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 62 # text = Document 00300223 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300223 00300223 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 63 # text = TNFalpha cooperates with the protein kinase A pathway to synergistically increase HIV-1 LTR transcription via downstream TRE-like cAMP response elements. 1 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 2 cooperates cooperate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 kinase kinase NOUN NN Number=Sing _ _ _ _ 7 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 pathway pathway NOUN NN Number=Sing _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 synergistically synergistically ADV RB _ _ _ _ _ 11 increase increase VERB VB VerbForm=Inf _ _ _ _ 12 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 LTR Ltr NOUN NN Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 via via ADP IN _ _ _ _ _ 18 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 19 TRE tre NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 like like ADJ JJ Degree=Pos _ _ _ _ 22 cAMP camp NOUN NN Number=Sing _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ _ 24 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 64 # text = Activating protein-1 (AP-1) binding TPA responsive elements (TRE) are located downstream of the transcription initiation site in the U5 region of the HIV-1 long terminal repeat (LTR). 1 Activating Activat VERB VBG VerbForm=Ger _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 -1 -1 NUM CD NumType=Card _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 TPA Tpa DET DT Definite=Ind|PronType=Art _ _ _ _ 11 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 12 elements element NOUN NNS Number=Plur _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 TRE Tre PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 downstream downstream NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 initiation initiation NOUN NN Number=Sing _ _ _ _ 23 site site NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 U5 U5 PROPN NNP Number=Sing _ _ _ _ 27 region region NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ _ 33 long long ADJ JJ Degree=Pos _ _ _ _ 34 terminal terminal NOUN NN Number=Sing _ _ _ _ 35 repeat repeat NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 LTR LTR NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 65 # text = These downstream sequence elements, termed DSE, can bind both AP-1 and CREB/ATF transcription factors. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 3 sequence sequence NOUN NN Number=Sing _ _ _ _ 4 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 DSE Dse NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 can can AUX MD VerbForm=Fin _ _ _ _ 10 bind bind VERB VB VerbForm=Inf _ _ _ _ 11 both both CCONJ CC _ _ _ _ _ 12 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 CREB Creb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 ATF Atf PROPN NNP Number=Sing _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 66 # text = Recently, we demonstrated that the DSE are also cAMP-responsive elements (CRE), since they mediated activation signals elicited by cholera toxin (Ctx), a potent activator of the cAMP-dependent protein kinase A (PKA) signal transduction pathway. 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 DSE Dse NOUN NN Number=Sing _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 also also ADV RB _ _ _ _ _ 10 cAMP camp ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 13 elements element NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 CRE CRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 since since SCONJ IN _ _ _ _ _ 19 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 20 mediated mediate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 signals signal NOUN NNS Number=Plur _ _ _ _ 23 elicited elicit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 cholera cholera NOUN NN Number=Sing _ _ _ _ 26 toxin toxin NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 Ctx Ctx PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 potent potent ADJ JJ Degree=Pos _ _ _ _ 33 activator activator NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 39 protein protein NOUN NN Number=Sing _ _ _ _ 40 kinase kinase NOUN NN Number=Sing _ _ _ _ 41 A A PROPN NNP Number=Sing _ _ _ _ 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 PKA PKA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ _ 45 signal signal NOUN NN Number=Sing _ _ _ _ 46 transduction transduction NOUN NN Number=Sing _ _ _ _ 47 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 67 # text = In the present study, we demonstrate that the HIV-1 DSE can mediate the transcriptional synergy elicited by the combination of Ctx and TNFalpha. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 DSE Dse NOUN NN Number=Sing _ _ _ _ 14 can can AUX MD VerbForm=Fin _ _ _ _ 15 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 synergy synergy NOUN NN Number=Sing _ _ _ _ 19 elicited elicit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 combination combination NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 Ctx Ctx PROPN NNP Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 68 # text = Ctx combined with TNFalpha or IL-1beta to produce a synergistic increase in p24 antigen production in U1 promonocytic cells. 1 Ctx Ctx NOUN NN Number=Sing _ _ _ _ 2 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 5 or or CCONJ CC _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 beta beta NOUN NN Number=Sing _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 produce produce VERB VB VerbForm=Inf _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 13 increase increase NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 p24 p24 NUM CD NumType=Card _ _ _ _ 16 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 17 production production NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 U1 U1 NUM CD NumType=Card _ _ _ _ 20 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 69 # text = Transfection studies of LTR reporter constructs indicated that mutation of the DSE sites abrogated the LTR-mediated synergy induced by Ctx and TNFalpha, whereas the synergy induced by Ctx and IL-1beta was unaffected, suggesting TNFalpha and IL-1beta cooperate differently with the cAMP/PKA activation pathway to induce HIV-1 expression in U1 cells. 1 Transfection Transfection NOUN NN Number=Sing _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 LTR Ltr ADJ JJ Degree=Pos _ _ _ _ 5 reporter reporter NOUN NN Number=Sing _ _ _ _ 6 constructs construct NOUN NNS Number=Plur _ _ _ _ 7 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 9 mutation mutation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 DSE DSE PROPN NNP Number=Sing _ _ _ _ 13 sites site NOUN NNS Number=Plur _ _ _ _ 14 abrogated abrogate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 LTR- ltr- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 synergy synergy NOUN NN Number=Sing _ _ _ _ 19 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 Ctx Ctx PROPN NNP Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 whereas whereas SCONJ IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 synergy synergy NOUN NN Number=Sing _ _ _ _ 28 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 Ctx Ctx PROPN NNP Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 beta beta NOUN NN Number=Sing _ _ _ _ 36 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 37 unaffected unaffected ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 40 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 beta beta NOUN NN Number=Sing _ _ _ _ 46 cooperate cooperate NOUN NN Number=Sing _ _ _ _ 47 differently differently ADV RB _ _ _ _ _ 48 with with ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 / / PUNCT , _ _ _ _ SpaceAfter=No 52 PKA PKa NOUN NN Number=Sing _ _ _ _ 53 activation activation NOUN NN Number=Sing _ _ _ _ 54 pathway pathway NOUN NN Number=Sing _ _ _ _ 55 to to PART TO _ _ _ _ _ 56 induce induce VERB VB VerbForm=Inf _ _ _ _ 57 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 59 1 1 NUM CD NumType=Card _ _ _ _ 60 expression expression NOUN NN Number=Sing _ _ _ _ 61 in in ADP IN _ _ _ _ _ 62 U1 U1 PROPN NNP Number=Sing _ _ _ _ 63 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 64 . . PUNCT . _ _ _ _ _ # sent_id = 70 # text = Because the DSE are also TRE sites, we assessed the effect of the agonist combinations on AP-1-dependent transcription. 1 Because because SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 DSE Dse NOUN NN Number=Sing _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 TRE Tre ADJ JJ Degree=Pos _ _ _ _ 7 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 10 assessed assess VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 effect effect NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 agonist agonist ADJ JJ Degree=Pos _ _ _ _ 16 combinations combination NOUN NNS Number=Plur _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 71 # text = TNFalpha as well as IL-1beta cooperated with Ctx to produce a synergistic activation of AP-1-mediated transcription. 1 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 2 as as ADV RB _ _ _ _ _ 3 well well ADV RB Degree=Pos _ _ _ _ 4 as as ADP IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 beta beta NOUN NN Number=Sing _ _ _ _ 9 cooperated cooperate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 Ctx Ctx PROPN NNP Number=Sing _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 produce produce VERB VB VerbForm=Inf _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 72 # text = These data indicate that the TRE-like cAMP-responsive DSE sites within the 5'-untranslated leader can mediate the transcriptional cooperativity between TNFalpha and the cAMP/PKA pathway. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 TRE Tre NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 like like ADJ JJ Degree=Pos _ _ _ _ 9 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 12 DSE Dse NOUN NN Number=Sing _ _ _ _ 13 sites site NOUN NNS Number=Plur _ _ _ _ 14 within within ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ' 's NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 - - SYM SYM _ _ _ _ SpaceAfter=No 19 untranslated untranslated ADJ JJ Degree=Pos _ _ _ _ 20 leader leader NOUN NN Number=Sing _ _ _ _ 21 can can AUX MD VerbForm=Fin _ _ _ _ 22 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 25 cooperativity cooperativity NOUN NN Number=Sing _ _ _ _ 26 between between ADP IN _ _ _ _ _ 27 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 / / PUNCT , _ _ _ _ SpaceAfter=No 32 PKA PKa NOUN NN Number=Sing _ _ _ _ 33 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 73 # text = Since the DSE and TRE sites cannot bind CREB/ATF homodimers, we propose a mechanism in which the HIV-1 DSE bind heterodimers composed of both AP-1 and CREB/ATF proteins. 1 Since since SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 DSE Dse NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 TRE Tre NOUN NN Number=Sing _ _ _ _ 6 sites site NOUN NNS Number=Plur _ _ _ _ 7 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 8 not not PART RB _ _ _ _ _ 9 bind bind VERB VB VerbForm=Inf _ _ _ _ 10 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 ATF ATF PROPN NNP Number=Sing _ _ _ _ 13 homodimers homodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 16 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 which which PRON WDT PronType=Rel _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 DSE Dse NOUN NN Number=Sing _ _ _ _ 26 bind bind ADP IN _ _ _ _ _ 27 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 28 composed compose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 both both DET DT _ _ _ _ _ 31 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 / / PUNCT , _ _ _ _ SpaceAfter=No 37 ATF ATF PROPN NNP Number=Sing _ _ _ _ 38 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 74 # text = Copyright 1997 Academic Press. 1 Copyright copyright NOUN NN Number=Sing _ _ _ _ 2 1997 1997 NUM CD NumType=Card _ _ _ _ 3 Academic academic PROPN NNP Number=Sing _ _ _ _ 4 Press. Press. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 75 # text = Document 00300229 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300229 00300229 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 76 # text = Signaling events induced by lipopolysaccharide-activated toll-like receptor 1 Signaling signal VERB VBG VerbForm=Ger _ _ _ _ 2 events event NOUN NNS Number=Plur _ _ _ _ 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 toll toll NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 like like ADJ JJ Degree=Pos _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ # sent_id = 77 # text = 2. 1 2 2 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 78 # text = Human Toll-like receptor 2 (TLR2) is a signaling receptor that responds to LPS and activates NF-kappaB. 1 Human human PROPN NNP Number=Sing _ _ _ _ 2 Toll toll PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 like like ADJ JJ Degree=Pos _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ _ 6 2 2 NUM CD NumType=Card _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 TLR2 TLR2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 signaling signaling NOUN NN Number=Sing _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 responds respond VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 LPS LPS PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 79 # text = Here, we investigate further the events triggered by TLR2 in response to LPS. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 investigate investigate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 further further ADV RBR Degree=Cmp _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 events event NOUN NNS Number=Plur _ _ _ _ 8 triggered trigger VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 TLR2 Tlr2 NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 response response NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 80 # text = We show that TLR2 associates with the high-affinity LPS binding protein membrane CD14 to serve as an LPS receptor complex, and that LPS treatment enhances the oligomerization of TLR2. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 TLR2 TLR2 NUM CD NumType=Card _ _ _ _ 5 associates associate NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 affinity affinity NOUN NN Number=Sing _ _ _ _ 11 LPS Lp NOUN NN Number=Sing _ _ _ _ 12 binding bind VERB VBG VerbForm=Ger _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 membrane membrane NOUN NN Number=Sing _ _ _ _ 15 CD14 CD14 PROPN NNP Number=Sing _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 serve serve VERB VB VerbForm=Inf _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 LPS LPS PROPN NNP Number=Sing _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ _ 22 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 LPS Lps PROPN NNP Number=Sing _ _ _ _ 27 treatment treatment NOUN NN Number=Sing _ _ _ _ 28 enhances enhance VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 oligomerization oligomerization NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 TLR2 TLR2 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 81 # text = Concomitant with receptor oligomerization, the IL-1R-associated kinase (IRAK) is recruited to the TLR2 complex. 1 Concomitant Concomitant ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 receptor receptor NOUN NN Number=Sing _ _ _ _ 4 oligomerization oligomerization NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 IL- Il- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 1R- 1R- PUNCT , _ _ _ _ SpaceAfter=No 9 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 kinase kinase NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 IRAK IRAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 recruited recruit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 TLR2 Tlr2 NOUN NN Number=Sing _ _ _ _ 19 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 82 # text = Intracellular deletion variants of TLR2 lacking C-terminal 13 or 141 aa fail to recruit IRAK, which is consistent with the inability of these mutants to transmit LPS cellular signaling. 1 Intracellular Intracelular ADJ JJ Degree=Pos _ _ _ _ 2 deletion deletion NOUN NN Number=Sing _ _ _ _ 3 variants variant NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 TLR2 TLR2 NUM CD NumType=Card _ _ _ _ 6 lacking lack NOUN NN Number=Sing _ _ _ _ 7 C- C- SYM SYM _ _ _ _ SpaceAfter=No 8 terminal terminal NOUN NN Number=Sing _ _ _ _ 9 13 13 NUM CD NumType=Card _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 141 141 NUM CD NumType=Card _ _ _ _ 12 aa a DET DT Typo=Yes _ _ _ _ 13 fail fail NOUN NN Number=Sing _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 recruit recruit VERB VB VerbForm=Inf _ _ _ _ 16 IRAK IRAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 inability inability NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 26 mutants mutant NOUN NNS Number=Plur _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 transmit transmit VERB VB VerbForm=Inf _ _ _ _ 29 LPS LPS PROPN NNP Number=Sing _ _ _ _ 30 cellular celular ADJ JJ Degree=Pos _ _ _ _ 31 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 83 # text = Moreover, both deletion mutants could still form complexes with wild-type TLR2 and act in a dominant-negative (DN) fashion to block TLR2-mediated signal transduction. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 both both DET DT _ _ _ _ _ 4 deletion deletion NOUN NN Number=Sing _ _ _ _ 5 mutants mutant NOUN NNS Number=Plur _ _ _ _ 6 could could AUX MD VerbForm=Fin _ _ _ _ 7 still still ADV RB _ _ _ _ _ 8 form form VERB VB VerbForm=Inf _ _ _ _ 9 complexes complexe NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 type type NOUN NN Number=Sing _ _ _ _ 14 TLR2 Tlr2 NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 act act NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 dominant dominant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 negative negative ADJ JJ Degree=Pos _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 DN DN NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 fashion fashion NOUN NN Number=Sing _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 block block VERB VB VerbForm=Inf _ _ _ _ 28 TLR2 Tlr2 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 signal signal NOUN NN Number=Sing _ _ _ _ 32 transduction transduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 84 # text = DN constructs of myeloid differentiation protein, IRAK, TNF receptor-associated factor 6, and NF-kappaB-inducing kinase, when coexpressed with TLR2, abrogate TLR2-mediated NF-kappaB activation. 1 DN Dn ADJ JJ Degree=Pos _ _ _ _ 2 constructs construct NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 5 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 IRAK IRAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 TNF TNF PROPN NNP Number=Sing _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 23 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 when when ADV WRB PronType=Int _ _ _ _ 26 coexpressed coexpress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 TLR2 Tlr2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 abrogate abrogate ADJ JJ Degree=Pos _ _ _ _ 31 TLR2 Tlr2 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 37 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 85 # text = These results reveal a conserved signaling pathway for TLR2 and IL-1Rs and suggest a molecular mechanism for the inhibition of TLR2 by DN variants. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 reveal reveal VERB VB VerbForm=Inf _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 signaling signaling NOUN NN Number=Sing _ _ _ _ 7 pathway pathway NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 TLR2 Tlr2 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 -1Rs -1R PROPN NNPS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 17 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 TLR2 TLR2 NUM CD NumType=Card _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 DN Dn ADJ JJ Degree=Pos _ _ _ _ 25 variants variant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 86 # text = Document 00300232 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300232 00300232 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 87 # text = The role of p16 in the E2F-dependent thymidine kinase regulation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p16 p16 NUM CD NumType=Card _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 E2F E2F PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 10 thymidine thymidine NOUN NN Number=Sing _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 88 # text = The role of alterations of the MTS1 tumor suppressor gene on chromosome 9p21, which encodes p16, the inhibitor of cyclin-dependent-kinase-4 and 6, in tumorigenesis is not yet clear. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 alterations alteration NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 MTS1 MTS1 PROPN NNP Number=Sing _ _ _ _ 8 tumor tumor NOUN NN Number=Sing _ _ _ _ 9 suppressor suppressor NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 13 9p21 9p21 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 p16 p16 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 cyclin cyclin NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 4 4 NUM CD NumType=Card _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 tumorigenesis tumorigenesis PRON DT Number=Sing|PronType=Dem _ _ _ _ 34 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 not not PART RB _ _ _ _ _ 36 yet yet ADV RB _ _ _ _ _ 37 clear clear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 89 # text = Phosphorylation of the retinoblastoma protein by cyclin-dependent kinases 4 and 6 prevents its interaction with the transcription factor E2F, which subsequently promotes the expression of S phase regulated genes, such as thymidine kinase. 1 Phosphorylation Phosphorylation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 retinoblastoma retinoblastoma NOUN NN Number=Sing _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 cyclin cyclin NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 10 kinases kinase NOUN NNS Number=Plur _ _ _ _ 11 4 4 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 6 6 NUM CD NumType=Card _ _ _ _ 14 prevents prevent NOUN NNS Number=Plur _ _ _ _ 15 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 interaction interaction NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 E2F E2F PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 subsequently subsequently ADV RB _ _ _ _ _ 25 promotes promote VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 S s PROPN NNP Number=Sing _ _ _ _ 30 phase phase NOUN NN Number=Sing _ _ _ _ 31 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 such such ADJ JJ Degree=Pos _ _ _ _ 35 as as ADP IN _ _ _ _ _ 36 thymidine thymidine PRON PRP _ _ _ _ _ 37 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 90 # text = Although a role of p16 in this regulation has been presumed, there is no proof so far that loss of this tumor suppressor gene really affects E2F-mediated regulations. 1 Although although SCONJ IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 role role NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 p16 p16 NUM CD NumType=Card _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 regulation regulation NOUN NN Number=Sing _ _ _ _ 9 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 11 presumed presume VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 there there PRON EX _ _ _ _ _ 14 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 no no DET DT _ _ _ _ _ 16 proof proof ADJ JJ Degree=Pos _ _ _ _ 17 so so ADV RB _ _ _ _ _ 18 far far ADV RB Degree=Pos _ _ _ _ 19 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 20 loss loss NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 23 tumor tumor NOUN NN Number=Sing _ _ _ _ 24 suppressor suppressor NOUN NN Number=Sing _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 really really ADV RB _ _ _ _ _ 27 affects affect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 E2F E2F PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 regulations regulation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 91 # text = We investigated the regulation of thymidine kinase in phytohemagglutinin-stimulated normal human lymphocytes and in the p16-negative human acute lymphoblastic leukemia cell lines, MOLT-4 and CEM. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 thymidine thymidine PRON PRP _ _ _ _ _ 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 phytohemagglutinin phytohemagglutinin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 normal normal ADJ JJ Degree=Pos _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 p16 p16 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 -negative -negative ADJ JJ Degree=Pos _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 acute acute NOUN NN Number=Sing _ _ _ _ 22 lymphoblastic lymphoblastic ADJ JJ Degree=Pos _ _ _ _ 23 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 MOLT Molt NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 4 4 NUM CD NumType=Card _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 CEM CEM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 92 # text = Compared to normal lymphocytes, MOLT-4 and CEM cells exhibited an altered cell cycle regulation of thymidine kinase, a much higher intracellular activity of this enzyme, and higher thymidine kinase mRNA expression. 1 Compared compare VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 normal normal ADJ JJ Degree=Pos _ _ _ _ 4 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 MOLT Molt NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 4 4 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 CEM CEM PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 exhibited exhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 altered alter VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 cycle cycle NOUN NN Number=Sing _ _ _ _ 17 regulation regulation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 thymidine thymidine NOUN NN Number=Sing _ _ _ _ 20 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 much much ADJ JJ Degree=Pos _ _ _ _ 24 higher higher ADJ JJR Degree=Cmp _ _ _ _ 25 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 26 activity activity NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 29 enzyme enzyme NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 higher higher ADV RBR Degree=Cmp _ _ _ _ 33 thymidine thymidine PRON PRP _ _ _ _ _ 34 kinase kinase VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 mRNA mRNa DET DT Definite=Ind|PronType=Art _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 93 # text = Transient expression of p16 in normal human lymphocytes caused arrest in G1, but was without effect on the cell growth of MOLT-4 and CEM cells, although all of them express functional retinoblastoma protein. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p16 p16 NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 normal normal ADJ JJ Degree=Pos _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 9 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 arrest arrest NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 G1 G1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 without without ADP IN _ _ _ _ _ 17 effect effect NOUN NN Number=Sing _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 growth growth NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 MOLT MOLT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 4 4 NUM CD NumType=Card _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 CEM CEM PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 although although SCONJ IN _ _ _ _ _ 31 all all DET DT _ _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ _ 34 express express ADJ JJ Degree=Pos _ _ _ _ 35 functional functional ADJ JJ Degree=Pos _ _ _ _ 36 retinoblastoma retinoblastoma NOUN NN Number=Sing _ _ _ _ 37 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 94 # text = Nevertheless, in the two leukemia cell lines transient overexpression of p16 reestablished the normal regulation of thymidine kinase, paralleled by an increase of the underphosphorylated form of retinoblastoma protein and decrease of free E2F bound to its motif in the thymidine kinase promoter. 1 Nevertheless nevertheless ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 two two NUM CD NumType=Card _ _ _ _ 6 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 lines line NOUN NNS Number=Plur _ _ _ _ 9 transient transient ADJ JJ Degree=Pos _ _ _ _ 10 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 p p NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 16 16 NUM CD NumType=Card _ _ _ _ 14 reestablished reestablish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 normal normal ADJ JJ Degree=Pos _ _ _ _ 17 regulation regulation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 thymidine thymidine PRON PRP _ _ _ _ _ 20 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 paralleled parallel VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 increase increase NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 underphosphorylated underphosphorylated ADJ JJ Degree=Pos _ _ _ _ 29 form form NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 retinoblastoma retinoblastoma NOUN NN Number=Sing _ _ _ _ 32 protein protein NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 decrease decrease NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 free free ADJ JJ Degree=Pos _ _ _ _ 37 E2 e2 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 F F PROPN NNP Number=Sing _ _ _ _ 39 bound bound ADJ JJ Degree=Pos _ _ _ _ 40 to to ADP IN _ _ _ _ _ 41 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 42 motif motif NOUN NN Number=Sing _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 thymidine thymidine NOUN NN Number=Sing _ _ _ _ 46 kinase kinase NOUN NN Number=Sing _ _ _ _ 47 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 95 # text = We demonstrate that loss of p16 causes upregulation of this DNA precursor pathway enzyme via activation of E2F by a mechanism involving retinoblastoma protein. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 loss loss NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 p16 p16 NUM CD NumType=Card _ _ _ _ 7 causes cause NOUN NNS Number=Plur _ _ _ _ 8 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 DNA dna NOUN NN Number=Sing _ _ _ _ 12 precursor precursor NOUN NN Number=Sing _ _ _ _ 13 pathway pathway NOUN NN Number=Sing _ _ _ _ 14 enzyme enzyme NOUN NN Number=Sing _ _ _ _ 15 via via ADP IN _ _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 E2 E2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 F F PROPN NNP Number=Sing _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 23 involving involve VERB VBG VerbForm=Ger _ _ _ _ 24 retinoblastoma retinoblastoma NOUN NN Number=Sing _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 96 # text = Document 00300233 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300233 00300233 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 97 # text = Modulation of endogenous IL-1 beta and IL-1 receptor antagonist results in opposing effects on HIV expression in chronically infected monocytic cells. 1 Modulation Modulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 beta beta NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 antagonist antagonist NOUN NN Number=Sing _ _ _ _ 14 results result NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 opposing oppose ADJ JJ Degree=Pos _ _ _ _ 17 effects effect NOUN NNS Number=Plur _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 HIV Hiv NOUN NN Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 chronically chronically ADV RB _ _ _ _ _ 23 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 98 # text = A proportion of HIV-infected individuals experience episodes of localized or systemic bacterial infections caused by Gram-negative bacteria. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 proportion proportion NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 HIV- HIV- PUNCT : _ _ _ _ SpaceAfter=No 5 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 individuals individual NOUN NNS Number=Plur _ _ _ _ 7 experience experience NOUN NN Number=Sing _ _ _ _ 8 episodes episode NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 localized localize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 systemic systemic ADJ JJ Degree=Pos _ _ _ _ 13 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 14 infections infection NOUN NNS Number=Plur _ _ _ _ 15 caused cause VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 Gram Gram PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 negative negative ADJ JJ Degree=Pos _ _ _ _ 20 bacteria bacterion NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 99 # text = Many of the clinical side effects of these infections are associated with the production of proinflammatory cytokines, which are induced primarily by LPS, a constituent of the bacterial cell wall of Gram-negative bacteria. 1 Many many ADJ JJ Degree=Pos _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 5 side side NOUN NN Number=Sing _ _ _ _ 6 effects effect NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 9 infections infection NOUN NNS Number=Plur _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 production production NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 17 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 primarily primarily ADV RB _ _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 constituent constituent NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 wall wall NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 Gram- Gram- SYM NFP _ _ _ _ SpaceAfter=No 35 negative negative ADJ JJ Degree=Pos _ _ _ _ 36 bacteria bacteria NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 100 # text = The present study examines the mechanisms involved in LPS-mediated induction of HIV expression in U1 cells, a promonocytic cell line chronically infected with HIV. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 examines examine VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 7 involved involve ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 LPS Lps PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 HIV HIV PROPN NNP Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 U1 U1 PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 line line NOUN NN Number=Sing _ _ _ _ 24 chronically chronically ADV RB _ _ _ _ _ 25 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 101 # text = Stimulation of U1 cells by LPS alone induced minimal levels of HIV expression, which was significantly enhanced by granulocyte-macrophage colony-stimulating factor (GM-CSF). 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 U1 U1 NUM CD NumType=Card _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 LPS LPS PROPN NNP Number=Sing _ _ _ _ 7 alone alone ADV RB _ _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 10 levels level NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 HIV HIV PROPN NNP Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 significantly significantly ADV RB _ _ _ _ _ 18 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 23 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 102 # text = Costimulation of U1 cells with LPS plus GM-CSF resulted in the accumulation of steady-state levels of HIV RNA; however, only a weak induction of HIV long terminal repeat-driven transcription, which was not associated with the activation of the cellular transcription factor nuclear factor-kappa B, was noted. 1 Costimulation Costimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 U1 U1 NUM CD NumType=Card _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 LPS LPS PROPN NNP Number=Sing _ _ _ _ 7 plus plus CCONJ CC _ _ _ _ _ 8 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 CSF CSF PROPN NNP Number=Sing _ _ _ _ 11 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 steady steady ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 state state NOUN NN Number=Sing _ _ _ _ 19 levels level NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 HIV HIV PROPN NNP Number=Sing _ _ _ _ 22 RNA RNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ; ; PUNCT , _ _ _ _ _ 24 however however ADV RB _ _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 only only ADV RB _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 weak weak ADJ JJ Degree=Pos _ _ _ _ 29 induction induction NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 HIV HIV PROPN NNP Number=Sing _ _ _ _ 32 long long ADJ JJ Degree=Pos _ _ _ _ 33 terminal terminal NOUN NN Number=Sing _ _ _ _ 34 repeat repeat VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 which which PRON WDT PronType=Rel _ _ _ _ 40 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 41 not not PART RB _ _ _ _ _ 42 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 43 with with ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 activation activation NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 49 transcription transcription NOUN NN Number=Sing _ _ _ _ 50 factor factor NOUN NN Number=Sing _ _ _ _ 51 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 52 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 54 kappa kappa NOUN NN Number=Sing _ _ _ _ 55 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 , , PUNCT , _ _ _ _ _ 57 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 58 noted note VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 103 # text = Costimulation of cells with LPS plus GM-CSF induced the production of proinflammatory cytokines, IL-8, IL-1 beta and IL-6, but not TNF-alpha. 1 Costimulation Costimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 LPS LPS PROPN NNP Number=Sing _ _ _ _ 6 plus plus CCONJ CC _ _ _ _ _ 7 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 CSF CSF PROPN NNP Number=Sing _ _ _ _ 10 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 production production NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 15 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 beta beta NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 but but CCONJ CC _ _ _ _ _ 31 not not ADV RB _ _ _ _ _ 32 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 104 # text = IL-1 receptor antagonist (ra) inhibited LPS enhancement of HIV expression in GM-CSF-stimulated cells, suggesting that endogenous IL-1 was involved in LPS-mediated viral production. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ _ 5 antagonist antagonist NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 ra ra X AFX _ _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 LPS LPS PROPN NNP Number=Sing _ _ _ _ 11 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 HIV Hiv PROPN NNP Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 26 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 involved involved ADJ JJ Degree=Pos _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 viral viral ADJ JJ Degree=Pos _ _ _ _ 36 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 105 # text = In this regard, anti-inflammatory cytokines inhibited LPS plus GM-CSF-stimulated HIV expression, and this effect closely correlated with inhibition of IL-1 beta release and, in particular, with up-regulation of endogenous IL-1ra production. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 regard regard NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 6 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 7 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 LPS Lp NOUN NNS Number=Plur _ _ _ _ 9 plus plus CCONJ CC _ _ _ _ _ 10 GM- GM- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 CSF CSF NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 HIV Hiv NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 19 effect effect NOUN NN Number=Sing _ _ _ _ 20 closely closely ADV RB _ _ _ _ _ 21 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 beta beta NOUN NN Number=Sing _ _ _ _ 29 release release NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 particular particular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 regulation regulation NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 41 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 ra ra NOUN NN Number=Sing _ _ _ _ 44 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 106 # text = Thus, the balance between an endogenously produced viral inducer (IL-1 beta ) and an inhibitor (IL-1ra) may represent an important pathway leading to modulation of 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 balance balance NOUN NN Number=Sing _ _ _ _ 5 between between ADP IN _ _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 endogenously endogenously ADV RB _ _ _ _ _ 8 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 viral viral ADJ JJ Degree=Pos _ _ _ _ 10 inducer inducer NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 beta beta NOUN NN Number=Sing _ _ _ _ 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1ra 1ra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 may may AUX MD VerbForm=Fin _ _ _ _ 26 represent represent VERB VB VerbForm=Inf _ _ _ _ 27 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 important important ADJ JJ Degree=Pos _ _ _ _ 29 pathway pathway NOUN NN Number=Sing _ _ _ _ 30 leading lead VERB VBG VerbForm=Ger _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 modulation modulation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ # sent_id = 107 # text = HIV expression from monocytic cells. 1 HIV Hiv NOUN NN Number=Sing _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 108 # text = Document 00300235 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300235 00300235 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 109 # text = Characterization of peripheral blood T-lymphocytes transduced with HTLV-I Tax mutants with different trans-activating phenotypes. 1 Characterization Characterization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 4 blood blood NOUN NN Number=Sing _ _ _ _ 5 T- T- PUNCT : _ _ _ _ SpaceAfter=No 6 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 7 transduced transduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 12 Tax Tax PROPN NNP Number=Sing _ _ _ _ 13 mutants mutant NOUN NNS Number=Plur _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 different different ADJ JJ Degree=Pos _ _ _ _ 16 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 activating activat VERB VBG VerbForm=Ger _ _ _ _ 19 phenotypes phenotype NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 110 # text = Tax1, a transcriptional trans-activator of the Human T-cell leukemia virus type I (HTLV-I), induces the expression of many cellular genes through interaction with at least three distinct cellular transcription factors; CREB/ATF, NF-kappaB, and SRF. 1 Tax1 Tax1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 - - PUNCT : _ _ _ _ SpaceAfter=No 7 activator activator NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 Human human ADJ JJ Degree=Pos _ _ _ _ 11 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 14 virus virus NOUN NN Number=Sing _ _ _ _ 15 type type NOUN NN Number=Sing _ _ _ _ 16 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 many many ADJ JJ Degree=Pos _ _ _ _ 28 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 29 genes gene NOUN NNS Number=Plur _ _ _ _ 30 through through ADP IN _ _ _ _ _ 31 interaction interaction NOUN NN Number=Sing _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 at at ADV RB _ _ _ _ _ 34 least least ADV RBS Degree=Sup _ _ _ _ 35 three three NUM CD NumType=Card _ _ _ _ 36 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 37 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 38 transcription transcription NOUN NN Number=Sing _ _ _ _ 39 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 ; ; PUNCT , _ _ _ _ _ 41 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 / / PUNCT , _ _ _ _ SpaceAfter=No 43 ATF ATF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 SRF SRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 111 # text = This Tax1-induced activation of cellular genes is considered to be a critical event in T-cell transformation by HTLV-I. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 Tax1 tax1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 8 genes gene NOUN NNS Number=Plur _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 considered consider VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 critical critical ADJ JJ Degree=Pos _ _ _ _ 15 event event NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 transformation transformation NOUN NN Number=Sing _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 112 # text = To elucidate the role of each Tax1-inducible transcriptional pathway in T-cell transformation, we introduced Tax1 mutants with different trans-activating phenotypes into peripheral blood lymphocytes (PBL) by retroviral vectors. 1 To to PART TO _ _ _ _ _ 2 elucidate elucidate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 each each DET DT _ _ _ _ _ 7 Tax1 tax1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 pathway pathway NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 transformation transformation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 18 introduced introduce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 Tax1 Tax1 NUM CD NumType=Card _ _ _ _ 20 mutants mutant NOUN NNS Number=Plur _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 different different ADJ JJ Degree=Pos _ _ _ _ 23 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 activating activat VERB VBG VerbForm=Ger _ _ _ _ 26 phenotypes phenotype NOUN NNS Number=Plur _ _ _ _ 27 into into ADP IN _ _ _ _ _ 28 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 29 blood blood NOUN NN Number=Sing _ _ _ _ 30 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 PBL PBL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 retroviral retroviral ADJ JJ Degree=Pos _ _ _ _ 36 vectors vector NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 113 # text = Analysis of these PBLs revealed that activation of the NF-kappaB pathway is sufficient to promote the growth response to IL-2. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 PBLs PBL NOUN NNS Number=Plur _ _ _ _ 5 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 pathway pathway NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 promote promote VERB VB VerbForm=Inf _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 growth growth NOUN NN Number=Sing _ _ _ _ 20 response response NOUN NN Number=Sing _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 114 # text = However, for the clonal expansion of CD4+ T-cells, which is a characteristic result of HTLV-I infection, activation of the CREB/ATF and SRF pathways is also required. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 clonal clonal ADJ JJ Degree=Pos _ _ _ _ 6 expansion expansion NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 + + SYM SYM _ _ _ _ _ 10 T- T- SYM SYM _ _ _ _ SpaceAfter=No 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 characteristic characteristic ADJ JJ Degree=Pos _ _ _ _ 17 result result NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 22 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 / / PUNCT , _ _ _ _ SpaceAfter=No 29 ATF ATF PROPN NNP Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 SRF SRF PROPN NNP Number=Sing _ _ _ _ 32 pathways pathways VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 also also ADV RB _ _ _ _ _ 35 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 115 # text = Document 00300238 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300238 00300238 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 116 # text = Activation of the Janus kinase 3-STAT5a pathway after CD40 triggering of human monocytes but not of resting B cells. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 Janus Janus PROPN NNP Number=Sing _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ _ 6 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 STAT5 STAT5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 pathway pathway NOUN NN Number=Sing _ _ _ _ 11 after after SCONJ IN _ _ _ _ _ 12 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 13 triggering triggering VERB VBG VerbForm=Ger _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 not not ADV RB _ _ _ _ _ 19 of of SCONJ IN _ _ _ _ _ 20 resting rest VERB VBG VerbForm=Ger _ _ _ _ 21 B b ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 117 # text = CD40/CD40 ligand interactions play a key role in the immune responses of B lymphocytes, monocytes, and dendritic cells. 1 CD40/CD40 CD40/CD40 NUM CD NumType=Card _ _ _ _ 2 ligand ligand NOUN NN Number=Sing _ _ _ _ 3 interactions interaction NOUN NNS Number=Plur _ _ _ _ 4 play play VERB VB VerbForm=Inf _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 key key ADJ JJ Degree=Pos _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 immune immune ADJ JJ Degree=Pos _ _ _ _ 11 responses response NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 B b ADJ JJ Degree=Pos _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 dendritic dendritic ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 118 # text = The signal transduction events triggered by cross-linking of the CD40 receptor have been widely studied in B cell lines, but little is known about signaling following CD40 stimulation of monocytes and resting tonsillar B cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 signal signal NOUN NN Number=Sing _ _ _ _ 3 transduction transduction NOUN NN Number=Sing _ _ _ _ 4 events event NOUN NNS Number=Plur _ _ _ _ 5 triggered trigger VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 -linking -linking NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 15 widely widely ADV RB _ _ _ _ _ 16 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 B b ADJ JJ Degree=Pos _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 little little ADJ JJ Degree=Pos _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 about about SCONJ IN _ _ _ _ _ 27 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 28 following follow VERB VBG VerbForm=Ger _ _ _ _ 29 CD40 CD40 NUM CD NumType=Card _ _ _ _ 30 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 resting rest VERB VBG VerbForm=Ger _ _ _ _ 35 tonsillar tonsillar NOUN NN Number=Sing _ _ _ _ 36 B b ADJ JJ Degree=Pos _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 119 # text = Therefore, we studied the CD40 pathway in highly purified human monocytes and resting B cells. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 7 pathway pathway NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 highly highly ADV RB _ _ _ _ _ 10 purified purified VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 resting rest VERB VBG VerbForm=Ger _ _ _ _ 15 B b ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 120 # text = After CD40 triggering, a similar activation of the NF-kappaB (but not of the AP-1) transcription factor complex occurred in both cell preparations. 1 After after SCONJ IN _ _ _ _ _ 2 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 3 triggering triggering VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 similar similar ADJ JJ Degree=Pos _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 but but CCONJ CC _ _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ _ 24 complex complex NOUN NN Number=Sing _ _ _ _ 25 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 both both DET DT _ _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 preparations preparation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 121 # text = However, the components of the NF-kappaB complexes were different in monocytes and B cells, because p50 is part of the NF-kappaB complex induced by CD40 triggering in both monocytes and B cells, whereas p65 was only induced in B cells. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 components component NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 complexes complexe NOUN NNS Number=Plur _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 different different ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 B b ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 because because SCONJ IN _ _ _ _ _ 20 p50 p50 NOUN NN Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 part part NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 28 complex complex NOUN NN Number=Sing _ _ _ _ 29 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 32 triggering triggere VERB VBG VerbForm=Ger _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 both both DET DT _ _ _ _ _ 35 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 B b ADJ JJ Degree=Pos _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 whereas whereas SCONJ IN _ _ _ _ _ 41 p65 p65 NOUN NN Number=Sing _ _ _ _ 42 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 43 only only ADV RB _ _ _ _ _ 44 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 B b ADJ JJ Degree=Pos _ _ _ _ 47 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 122 # text = In contrast, although the Janus kinase 3 tyrosine kinase was associated with CD40 molecules in both monocytes and resting B cells, Janus kinase 3 phosphorylation induction was observed only in CD40-activated monocytes, with subsequent induction of STAT5a DNA binding activity in the nucleus. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 although although SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 Janus Janus PROPN NNP Number=Sing _ _ _ _ 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 3 3 NUM CD NumType=Card _ _ _ _ 9 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 10 kinase kinase NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 CD40 CD40 NUM CD NumType=Card _ _ _ _ 15 molecules molecule NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 both both DET DT _ _ _ _ _ 18 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 resting rest VERB VBG VerbForm=Ger _ _ _ _ 21 B b ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 Janus Janus PROPN NNP Number=Sing _ _ _ _ 25 kinase kinase NOUN NN Number=Sing _ _ _ _ 26 3 3 NUM CD NumType=Card _ _ _ _ 27 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 28 induction induction NOUN NN Number=Sing _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 only only ADV RB _ _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT , _ _ _ _ SpaceAfter=No 35 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 with with ADP IN _ _ _ _ _ 39 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 40 induction induction NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 STAT5 STAT5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 44 DNA dna NOUN NN Number=Sing _ _ _ _ 45 binding binde VERB VBG VerbForm=Ger _ _ _ _ 46 activity activity NOUN NN Number=Sing _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 123 # text = These results suggest that the activation signals in human B cells and monocytes differ following CD40 stimulation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 signals signal NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 B b ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 14 differ differ VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 following follow VERB VBG VerbForm=Ger _ _ _ _ 16 CD40 CD40 NUM CD NumType=Card _ _ _ _ 17 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 124 # text = This observation is consistent with the detection of normal CD40-induced monocyte activation in patients with CD40 ligand+ hyper IgM syndrome in whom a defect in CD40-induced 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 observation observation NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 detection detection NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 normal normal ADJ JJ Degree=Pos _ _ _ _ 10 CD40 CD40 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 patients patient NOUN NNS Number=Plur _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 CD40 CD40 NUM CD NumType=Card _ _ _ _ 19 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 + + SYM SYM _ _ _ _ _ 21 hyper hyper NOUN NN Number=Sing _ _ _ _ 22 IgM Igm NOUN NN Number=Sing _ _ _ _ 23 syndrome syndrome NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 whom whom PRON WP PronType=Rel _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 defect defect NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 -induced -induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ # sent_id = 125 # text = B cell activation has been reported. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 6 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 126 # text = Document 00300243 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300243 00300243 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 127 # text = Identification of an I kappa B alpha-associated protein kinase in a human monocytic cell line and determination of its phosphorylation sites on I kappa B alpha. 1 Identification identification NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 5 kappa kappa X GW _ _ _ _ _ 6 B B X GW _ _ _ _ _ 7 alpha alpha X GW _ _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 line line NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 determination determination NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 22 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 23 sites site NOUN NNS Number=Plur _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 26 kappa kappa PROPN NNP Number=Sing _ _ _ _ 27 B B PROPN NNP Number=Sing _ _ _ _ 28 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 128 # text = Nuclear factor kappa B (NF-kappa B) is stored in the cytoplasm as an inactive form through interaction with I kappa B. Stimulation of cells leads to a rapid phosphorylation of I kappa B alpha, which is presumed to be important for the subsequent degradation. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 stored store VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 19 form form NOUN NN Number=Sing _ _ _ _ 20 through through ADP IN _ _ _ _ _ 21 interaction interaction NOUN NN Number=Sing _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ 25 B. B. PROPN NNP Number=Sing _ _ _ _ 26 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 33 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 36 kappa kappa PROPN NNP Number=Sing _ _ _ _ 37 B b PROPN NNP Number=Sing _ _ _ _ 38 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 which which PRON WDT PronType=Rel _ _ _ _ 41 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 42 presumed presume VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 43 to to PART TO _ _ _ _ _ 44 be be AUX VB VerbForm=Inf _ _ _ _ 45 important important ADJ JJ Degree=Pos _ _ _ _ 46 for for ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 49 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 129 # text = We have recently reported the establishment of a lipopolysaccharide (LPS)-dependent cell-free activation system of NF-kappa B in association with the induction of I kappa B alpha phosphorylation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 recently recently ADV RB _ _ _ _ _ 4 reported report VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 establishment establishment NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 free free ADJ JJ Degree=Pos _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 system system NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa NOUN NN Number=Sing _ _ _ _ 24 B b NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 association association NOUN NN Number=Sing _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 induction induction NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 32 kappa kappa PROPN NNP Number=Sing _ _ _ _ 33 B b PROPN NNP Number=Sing _ _ _ _ 34 alpha alpha ADP IN _ _ _ _ _ 35 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 130 # text = In this study, we have identified a kinase in cell extracts from the LPS-stimulated human monocytic cell line, THP-1, that specifically binds and phosphorylates I kappa B alpha. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 kinase kinase NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 extracts extract NOUN NNS Number=Plur _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 that that SCONJ IN _ _ _ _ _ 28 specifically specifically ADV RB _ _ _ _ _ 29 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 phosphorylates phosphorylate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 33 kappa kappa X FW Foreign=Yes _ _ _ _ 34 B b ADJ JJ Degree=Pos _ _ _ _ 35 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 131 # text = LPS stimulation transiently enhanced the I kappa B alpha-bound kinase activity in THP-1 cells. 1 LPS Lps NOUN NN Number=Sing _ _ _ _ 2 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 3 transiently transiently ADV RB _ _ _ _ _ 4 enhanced enhance VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 I I PROPN NNP Number=Sing _ _ _ _ 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B b PROPN NNP Number=Sing _ _ _ _ 9 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 bound bound ADJ JJ Degree=Pos _ _ _ _ 12 kinase kinase NOUN NN Number=Sing _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 THP THP NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 132 # text = Mutational analyses of I kappa B alpha and competition experiments with the synthetic peptides identified major phosphorylation sites by the bound kinase as Ser and Thr residues in the C-terminal acidic domain of I kappa B alpha. 1 Mutational Mutational ADJ JJ Degree=Pos _ _ _ _ 2 analyses analysis NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 5 kappa kappa X FW Foreign=Yes _ _ _ _ 6 B b ADJ JJ Degree=Pos _ _ _ _ 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 competition competition NOUN NN Number=Sing _ _ _ _ 10 experiments experiment NOUN NNS Number=Plur _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 14 peptides peptide NOUN NNS Number=Plur _ _ _ _ 15 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 major major ADJ JJ Degree=Pos _ _ _ _ 17 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 18 sites site NOUN NNS Number=Plur _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 bound bound ADJ JJ Degree=Pos _ _ _ _ 22 kinase kinase NOUN NN Number=Sing _ _ _ _ 23 as as ADP IN _ _ _ _ _ 24 Ser Ser PROPN NNP Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 Thr Thr PROPN NNP Number=Sing _ _ _ _ 27 residues residue NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 C- C- NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 32 acidic acidic ADJ JJ Degree=Pos _ _ _ _ 33 domain domain NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 36 kappa kappa PROPN NNP Number=Sing _ _ _ _ 37 B B PROPN NNP Number=Sing _ _ _ _ 38 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 133 # text = Moreover, we show that the peptide, corresponding to the C-terminal acidic domain of I kappa B alpha, blocked the LPS-induced NF-kappa B activation as well as inducible phosphorylation of endogenous I kappa B alpha in a cell-free system using THP-1 cells. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 peptide peptide NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 corresponding correspond VERB VBG VerbForm=Ger _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 C- c- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 14 acidic acidic ADJ JJ Degree=Pos _ _ _ _ 15 domain domain NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B B PROPN NNP Number=Sing _ _ _ _ 20 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ _ 31 activation activation NOUN NN Number=Sing _ _ _ _ 32 as as ADV RB _ _ _ _ _ 33 well well ADV RB Degree=Pos _ _ _ _ 34 as as ADP IN _ _ _ _ _ 35 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 36 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 39 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 40 kappa kappa PROPN NNP Number=Sing _ _ _ _ 41 B b PROPN NNP Number=Sing _ _ _ _ 42 alpha alpha NOUN NN Number=Sing _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 45 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 free free ADJ JJ Degree=Pos _ _ _ _ 48 system system NOUN NN Number=Sing _ _ _ _ 49 using using VERB VBG VerbForm=Ger _ _ _ _ 50 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 1 1 NUM CD NumType=Card _ _ _ _ 53 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 134 # text = These results suggested that the bound kinase is involved in the signaling pathway of LPS by inducing the phosphorylation of the C-terminal region of 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 bound bound ADJ JJ Degree=Pos _ _ _ _ 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 involved involved ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 signaling signaling NOUN NN Number=Sing _ _ _ _ 13 pathway pathway NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 LPS LPS PROPN NNP Number=Sing _ _ _ _ 16 by by SCONJ IN _ _ _ _ _ 17 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 C- c- NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 terminal terminal NOUN NN Number=Sing _ _ _ _ 24 region region NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ # sent_id = 135 # text = I kappa B alpha and subsequent dissociation of the NF-kappa B.I kappa B alpha complex. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa X FW Foreign=Yes _ _ _ _ 3 B b ADJ JJ Degree=Pos _ _ _ _ 4 alpha alpha NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 7 dissociation dissociation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa PROPN NNP Number=Sing _ _ _ _ 13 B. B. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 15 kappa kappa X FW Foreign=Yes _ _ _ _ 16 B b X LS _ _ _ _ _ 17 alpha alpha X FW Foreign=Yes _ _ _ _ 18 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 136 # text = Document 00300245 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300245 00300245 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 137 # text = MIP1 alpha nuclear protein (MNP), a novel transcription factor expressed in hematopoietic cells that is crucial for transcription of the human MIP-1 alpha gene. 1 MIP1 MIP1 X LS _ _ _ _ _ 2 alpha alpha X FW Foreign=Yes _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 MNP MNP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 novel novel NOUN NN Number=Sing _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 MIP Mip NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 alpha alpha NOUN NN Number=Sing _ _ _ _ 29 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 138 # text = Murine macrophage inflammatory protein 1 alpha (MIP-1 alpha) and its human equivalent (GOS19, LD78, or AT464) are members of the -C-C family of low-molecular-weight chemokines. 1 Murine Murine PRON PRP _ _ _ _ _ 2 macrophage macrophage VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 1 1 NUM CD NumType=Card _ _ _ _ 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 MIP Mip NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 equivalent equivalent NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 GOS19 GOS19 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 LD78 LD78 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 AT464 At464 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 members member NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 C C PROPN NNP Number=Sing _ _ _ _ 33 family family NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 low- low- SYM NFP _ _ _ _ SpaceAfter=No 36 molecular molecular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 weight weight NOUN NN Number=Sing _ _ _ _ 39 chemokines chemokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 139 # text = Secreted from activated T cells and macrophages, bone marrow-derived MIP-1 alpha/GOS19 inhibits primitive hematopoietic stem cells and appears to be involved in the homeostatic control of stem cell proliferation. 1 Secreted Secret VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 from from ADP IN _ _ _ _ _ 3 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 bone bone VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 marrow marrow NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 MIP Mip NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 GOS19 GOS19 NUM CD NumType=Card _ _ _ _ 19 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 20 primitive primitive ADJ JJ Degree=Pos _ _ _ _ 21 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 22 stem stem NOUN NN Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 be be AUX VB VerbForm=Inf _ _ _ _ 28 involved involved ADJ JJ Degree=Pos _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 homeostatic homeostatic ADJ JJ Degree=Pos _ _ _ _ 32 control control NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 stem stem NOUN NN Number=Sing _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ _ 36 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 140 # text = It also induces chemotaxis and inflammatory responses in mature cell types. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 chemotaxis chemotaxis NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 7 responses response NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 mature mature ADJ JJ Degree=Pos _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 141 # text = Therefore, it is important to understand the mechanisms which control the expression of MIP-1 alpha/GOS19. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 important important ADJ JJ Degree=Pos _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 understand understand VERB VB VerbForm=Inf _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 10 which which PRON WDT PronType=Rel _ _ _ _ 11 control control VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 MIP MIP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 alpha/ alpha/ SYM SYM _ _ _ _ SpaceAfter=No 19 GOS19 GOS19 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 142 # text = Previous work has shown that in Jurkat T cells, a set of widely expressed transcription factors (the ICK-1 family) affect the GOS19 promoter. 1 Previous previous ADJ JJ Degree=Pos _ _ _ _ 2 work work NOUN NN Number=Sing _ _ _ _ 3 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 8 T T PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 set set NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 widely widely ADV RB _ _ _ _ _ 15 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factors factor NOUN NNS Number=Plur _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 ICK ICK NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 affect affect VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 GOS19 GOS19 NUM CD NumType=Card _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 143 # text = One member, ICK-1A, behaves as a strong negative regulator. 1 One one NUM CD NumType=Card _ _ _ _ 2 member member NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 ICK ICK NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 behaves behave VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 strong strong ADJ JJ Degree=Pos _ _ _ _ 13 negative negative ADJ JJ Degree=Pos _ _ _ _ 14 regulator regulator NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 144 # text = In this communication, we provide evidence that the pathway of induction in the macrophage cell line U937 is different from that in Jurkat cells. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 communication communication NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 evidence evidence NOUN NN Number=Sing _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 pathway pathway NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 line line NOUN NN Number=Sing _ _ _ _ 18 U937 U937 NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 different different ADJ JJ Degree=Pos _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 145 # text = Furthermore, we show that the ICK-1 binding site does not confer negative regulation in U937 cells. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 ICK Ick NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 binding binding NOUN NN Number=Sing _ _ _ _ 11 site site NOUN NN Number=Sing _ _ _ _ 12 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 confer confer VERB VB VerbForm=Inf _ _ _ _ 15 negative negative ADJ JJ Degree=Pos _ _ _ _ 16 regulation regulation NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 U937 U937 NUM CD NumType=Card _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 146 # text = We provide evidence for an additional binding site, the MIP-1 alpha nuclear protein (MNP) site, which overlaps the ICK-1 site. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 evidence evidence NOUN NN Number=Sing _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 additional additional ADJ JJ Degree=Pos _ _ _ _ 7 binding binding NOUN NN Number=Sing _ _ _ _ 8 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 MIP Mip NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 alpha alpha NOUN NN Number=Sing _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 MNP MNP NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 overlaps overlaps VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 ICK ick NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 147 # text = Interaction of nuclear extracts from various cell lines and tissue with the MNP site leads to the formation of fast-migrating protein-DNA complexes with similar but distinct electrophoretic mobilities. 1 Interaction interaction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 extracts extract NOUN NNS Number=Plur _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 various various ADJ JJ Degree=Pos _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 lines line NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 tissue tissue NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 MNP MNP PROPN NNP Number=Sing _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ _ 15 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 formation formation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 fast fast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 migrating migrating NOUN NN Number=Sing _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 DNA dna NOUN NN Number=Sing _ _ _ _ 26 complexes complex NOUN NNS Number=Plur _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 similar similar ADJ JJ Degree=Pos _ _ _ _ 29 but but CCONJ CC _ _ _ _ _ 30 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 31 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 32 mobilities mobility NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 148 # text = A mutation of the MNP site which does not abrogate ICK-1 binding inactivates the GOS19.1 promoter in U937 cells and reduces its activity by fourfold in Jurkat cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 mutation mutation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 MNP MNP PROPN NNP Number=Sing _ _ _ _ 6 site site NOUN NN Number=Sing _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 abrogate abrogate VERB VB VerbForm=Inf _ _ _ _ 11 ICK Ick NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 binding binding NOUN NN Number=Sing _ _ _ _ 15 inactivates inactivate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 GOS19.1 Gos19.1 PROPN NNP Number=Sing _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 U937 U937 NUM CD NumType=Card _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 reduces reduce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 fourfold fourfold NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 149 # text = We propose that the MNP protein(s) binding at the MNP site constitutes a novel transcription factor(s) expressed in hematopoietic cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 MNP Mnp NOUN NN Number=Sing _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 s s X AFX _ _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 binding bind VERB VBG VerbForm=Ger _ _ _ _ 11 at at ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 MNP MNP PROPN NNP Number=Sing _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ _ 15 constitutes constitute VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 novel novel NOUN NN Number=Sing _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 s s X AFX _ _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 150 # text = Document 00300247 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300247 00300247 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 151 # text = Interferons induce normal and aberrant retinoic-acid receptors type alpha in acute promyelocytic leukemia cells: potentiation of the induction of retinoid-dependent differentiation markers. 1 Interferons Interferon NOUN NNS Number=Plur _ _ _ _ 2 induce induce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 normal normal ADJ JJ Degree=Pos _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 aberrant aberrant ADJ JJ Degree=Pos _ _ _ _ 6 retinoic retinoic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 acid acid ADJ JJ Degree=Pos _ _ _ _ 9 receptors receptor NOUN NN Number=Sing _ _ _ _ 10 type type NOUN NN Number=Sing _ _ _ _ 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 acute acute ADJ JJ Degree=Pos _ _ _ _ 14 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ _ 15 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 : : PUNCT : _ _ _ _ _ 18 potentiation potentiation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 induction induction NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 retinoid retinoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 26 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 27 markers marker NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 152 # text = Treatment of the acute promyelocytic (APL) cell line NB4 with interferon alpha (IFN(alpha)), as well as IFN(beta) and gamma, results in an increased expression of the transcripts coding for retinoic-acid receptor type alpha (RAR(alpha)) and the leukemia-specific retinoic acid receptor PML-RAR. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 acute acute ADJ JJ Degree=Pos _ _ _ _ 5 promyelocytic promyelocytic NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 APL APL NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 line line NOUN NN Number=Sing _ _ _ _ 11 NB4 Nb4 NOUN NN Number=Sing _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 interferon interferon NOUN NN Number=Sing _ _ _ _ 14 alpha alpha NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 IFN Ifn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 alpha alpha X FW Foreign=Yes _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 as as ADV RB _ _ _ _ _ 23 well well ADV RB Degree=Pos _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 results result NOUN NNS Number=Plur _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 40 coding cod VERB VBG VerbForm=Ger _ _ _ _ 41 for for ADP IN _ _ _ _ _ 42 retinoic retinoic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 acid acid ADJ JJ Degree=Pos _ _ _ _ 45 receptor receptor NOUN NN Number=Sing _ _ _ _ 46 type type NOUN NN Number=Sing _ _ _ _ 47 alpha alpha NOUN NN Number=Sing _ _ _ _ 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 RAR Rar NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 51 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 53 ) ) PUNCT -RRB- _ _ _ _ _ 54 and and CCONJ CC _ _ _ _ _ 55 the the DET DT Definite=Def|PronType=Art _ _ _ _ 56 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 specific specific ADJ JJ Degree=Pos _ _ _ _ 59 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 60 acid acid NOUN NN Number=Sing _ _ _ _ 61 receptor receptor NOUN NN Number=Sing _ _ _ _ 62 PML PML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 63 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 64 RAR RAR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 65 . . PUNCT . _ _ _ _ _ # sent_id = 153 # text = Transcriptional induction of the RAR(alpha) and PML-RAR mRNAs is rapid and it is parallelled by an increase in the corresponding proteins. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 RAR RAR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 alpha alpha X FW Foreign=Yes _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 PML PML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 RAR RAR PROPN NNP Number=Sing _ _ _ _ 13 mRNAs mRNAs PROPN NNP Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 parallelled parallell VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 increase increase NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 corresponding corresponding NOUN NN Number=Sing _ _ _ _ 26 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 154 # text = Up-regulation of RAR(alpha) and PML-RAR gene expression by IFN(alpha) is accompanied by a strong potentiation in the induction of 2 retinoid-dependent granulocytic markers, i.e., granulocyte-colony-stimulating factor receptor mRNA and leukocyte alkaline phosphatase. 1 Up- Up- SYM NFP _ _ _ _ SpaceAfter=No 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 RAR RAR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 alpha alpha X FW Foreign=Yes _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 PML PML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 RAR RAR PROPN NNP Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 alpha alpha X FW Foreign=Yes _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 strong strong ADJ JJ Degree=Pos _ _ _ _ 24 potentiation potentiation NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 induction induction NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 2 2 NUM CD NumType=Card _ _ _ _ 30 retinoid retinoid VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 31 -dependent -dependent ADJ JJ Degree=Pos _ _ _ _ 32 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 33 markers marker NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 i.e. i.e. X FW _ _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 stimulating stimulate VERB VBG VerbForm=Ger _ _ _ _ 42 factor factor NOUN NN Number=Sing _ _ _ _ 43 receptor receptor NOUN NN Number=Sing _ _ _ _ 44 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 47 alkaline alkaline NOUN NN Number=Sing _ _ _ _ 48 phosphatase phosphatase NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 155 # text = However, IFN(alpha) does not have any effects on the retinoid-dependent regulation of the myeloid surface markers CD11b and CD33. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 IFN( IFN( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 alpha alpha X FW Foreign=Yes _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 have have VERB VB VerbForm=Inf _ _ _ _ 9 any any DET DT _ _ _ _ _ 10 effects effect NOUN NNS Number=Plur _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 retinoid retinoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 16 regulation regulation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 20 surface surface NOUN NN Number=Sing _ _ _ _ 21 markers marker NOUN NNS Number=Plur _ _ _ _ 22 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 11 11 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 b b NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 CD33 CD33 NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 156 # text = The IFN-dependent increase in RAR(alpha) levels and the enhancing effect of the cytokine on retinoid-dependent granulocytic markers expression may be a characteristic of PML-RAR positive cells, since the phenomena are not observed in HL-60 promyelocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 IFN Ifn ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 5 increase increase NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 RAR RAR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 alpha alpha X FW Foreign=Yes _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 enhancing enhance VERB VBG VerbForm=Ger _ _ _ _ 15 effect effect NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 retinoid retinoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 23 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 24 markers marker NOUN NNS Number=Plur _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 may may AUX MD VerbForm=Fin _ _ _ _ 27 be be AUX VB VerbForm=Inf _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 characteristic characteristic NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 PML PML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 RAR RAR PROPN NNP Number=Sing _ _ _ _ 34 positive positive ADJ JJ Degree=Pos _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 since since SCONJ IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 phenomena phenomena NOUN NN Number=Sing _ _ _ _ 40 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 41 not not PART RB _ _ _ _ _ 42 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT , _ _ _ _ SpaceAfter=No 46 60 60 NUM CD NumType=Card _ _ _ _ 47 promyelocytes promyelocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 157 # text = Interferons as well as retinoids inhibit the growth of NB4 cells, although the 2 classes of compounds do not significantly interact in terms of anti-proliferative activity. 1 Interferons Interferon NOUN NNS Number=Plur _ _ _ _ 2 as as ADV RB _ _ _ _ _ 3 well well ADV RB Degree=Pos _ _ _ _ 4 as as ADP IN _ _ _ _ _ 5 retinoids retinoid NOUN NNS Number=Plur _ _ _ _ 6 inhibit inhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 growth growth NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NB4 NB4 NUM CD NumType=Card _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 although although SCONJ IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 2 2 NUM CD NumType=Card _ _ _ _ 16 classes class NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 compounds compound NOUN NNS Number=Plur _ _ _ _ 19 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 significantly significantly ADV RB _ _ _ _ _ 22 interact interact VERB VB VerbForm=Inf _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 terms term NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 anti-proliferative anti-proliferative ADJ JJ Degree=Pos _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 158 # text = These results suggest the possible use of combinations between IFNs and retinoic acid in the cyto-differentiating treatment of APL patients. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 possible possible ADJ JJ Degree=Pos _ _ _ _ 6 use use NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 combinations combination NOUN NNS Number=Plur _ _ _ _ 9 between between ADP IN _ _ _ _ _ 10 IFNs IFN PROPN NNPS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 13 acid acid NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 cyto-differentiating cyto-differentiating ADJ JJ Degree=Pos _ _ _ _ 17 treatment treatment NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 APL Apl ADJ JJ Degree=Pos _ _ _ _ 20 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 159 # text = Document 00300248 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300248 00300248 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 160 # text = Nuclear factor kappa B activates proenkephalin transcription in T lymphocytes. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 proenkephalin proenkephalin ADJ JJ Degree=Pos _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 161 # text = Upon activation, T lymphocytes accumulate high levels of the neuropeptide enkephalin which correlate with high levels of proenkephalin mRNA in the cells. 1 Upon upon ADP IN _ _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 6 accumulate accumulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 high high ADJ JJ Degree=Pos _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 neuropeptide neuropeptide ADJ JJ Degree=Pos _ _ _ _ 12 enkephalin enkephalin NOUN NN Number=Sing _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 correlate correlate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 high high ADJ JJ Degree=Pos _ _ _ _ 17 levels level NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 proenkephalin proenkephalin ADJ JJ Degree=Pos _ _ _ _ 20 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 162 # text = Here we investigated the transcriptional basis for these changes. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 6 basis basis NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 9 changes change NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 163 # text = The proenkephalin promoter contains a sequence GGGGACGTCCCC, named B2, which is similar to the kappa B sequence GGGGACTTTCC, the binding site of the transcription factor nuclear factor (NF)-kappa B. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 proenkephalin proenkephalin ADJ JJ Degree=Pos _ _ _ _ 3 promoter promoter NOUN NN Number=Sing _ _ _ _ 4 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 sequence sequence NOUN NN Number=Sing _ _ _ _ 7 GGGGACGTCCCC Ggggacgtcccc NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 named nam VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 B2 b2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 similar similar ADJ JJ Degree=Pos _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B b PROPN NNP Number=Sing _ _ _ _ 19 sequence sequence NOUN NN Number=Sing _ _ _ _ 20 GGGGACTTTCC GGGGACTTTCC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 binding bind VERB VBG VerbForm=Ger _ _ _ _ 24 site site NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 factor factor NOUN NN Number=Sing _ _ _ _ 29 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 - - PUNCT : _ _ _ _ SpaceAfter=No 35 kappa kappa PROPN NNP Number=Sing _ _ _ _ 36 B. B. PROPN NNP Number=Sing _ _ _ _ # sent_id = 164 # text = Activation of T lymphocytes induces an NF-kappa B-like binding activity to the B2 site, concomitant with activation of the proenkephalin promoter. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T T PROPN NNP Number=Sing _ _ _ _ 4 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 5 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 like like SCONJ IN _ _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 B2 b2 NOUN NN Number=Sing _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 concomitant concomitant ADJ JJ Degree=Pos _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 proenkephalin proenkephalin ADJ JJ Degree=Pos _ _ _ _ 26 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 165 # text = Mutations at the B2 site abolish this transcriptional activation. 1 Mutations Mutation NOUN NNS Number=Plur _ _ _ _ 2 at at ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 B2 B2 NUM CD NumType=Card _ _ _ _ 5 site site NOUN NN Number=Sing _ _ _ _ 6 abolish abolish VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 166 # text = The purified homodimer (two p50s) of the DNA-binding subunit of NF-kappa B binds the B2 site of proenkephalin relatively better than does the heterotetramer (two p65s plus two p50s) form of the factor. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 purified purify ADJ JJ Degree=Pos _ _ _ _ 3 homodimer homodimer NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 two two NUM CD NumType=Card _ _ _ _ 6 p50s p50 NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 subunit subunit NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B B PROPN NNP Number=Sing _ _ _ _ 19 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 B2 B2 NUM CD NumType=Card _ _ _ _ 22 site site NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 proenkephalin proenkephalin NOUN NN Number=Sing _ _ _ _ 25 relatively relatively ADV RB _ _ _ _ _ 26 better better ADJ JJR Degree=Cmp _ _ _ _ 27 than than ADP IN _ _ _ _ _ 28 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 heterotetramer heterotetramer NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 two two NUM CD NumType=Card _ _ _ _ 33 p65s p65 NOUN NNS Number=Plur _ _ _ _ 34 plus plus CCONJ CC _ _ _ _ _ 35 two two NUM CD NumType=Card _ _ _ _ 36 p50s p50 NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 form form NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 167 # text = Thus, it appears that the T-cell-specific activation of the proenkephalin promoter is mediated by NF-kappa B. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 4 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 T-cell T-cell ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 proenkephalin proenkephalin NOUN NN Number=Sing _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa PROPN NNP Number=Sing _ _ _ _ 21 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 168 # text = However, as NF-kappa B is ubiquitous and the transcriptional activation through the B2 site is T cell specific, yet another T-cell-specific factor which synergizes with NF-kappa B should be considered. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 as as ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 through through ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 B2 b2 NOUN NN Number=Sing _ _ _ _ 17 site site NOUN NN Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 yet yet CCONJ CC _ _ _ _ _ 24 another another DET DT _ _ _ _ _ 25 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 specific specific ADJ JJ Degree=Pos _ _ _ _ 29 factor factor NOUN NN Number=Sing _ _ _ _ 30 which which PRON WDT PronType=Rel _ _ _ _ 31 synergizes synergize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 kappa kappa NOUN NN Number=Sing _ _ _ _ 36 B b NOUN NN Number=Sing _ _ _ _ 37 should should AUX MD VerbForm=Fin _ _ _ _ 38 be be AUX VB VerbForm=Inf _ _ _ _ 39 considered consider VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 169 # text = Document 00300253 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300253 00300253 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 170 # text = A hydrophobic domain of Ca2+-modulating cyclophilin ligand modulates calcium influx signaling in T lymphocytes. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 hydrophobic hydrophobic ADJ JJ Degree=Pos _ _ _ _ 3 domain domain NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Ca2+- Ca2+- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 modulating modulat NOUN NN Number=Sing _ _ _ _ 7 cyclophilin cyclophilin NOUN NN Number=Sing _ _ _ _ 8 ligand ligand NOUN NN Number=Sing _ _ _ _ 9 modulates modulate NOUN NNS Number=Plur _ _ _ _ 10 calcium calcium NOUN NN Number=Sing _ _ _ _ 11 influx influx SYM SYM _ _ _ _ _ 12 signaling signale VERB VBG VerbForm=Ger _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 T T PROPN NNP Number=Sing _ _ _ _ 15 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 171 # text = Ca2+-modulating cyclophilin ligand (CAML) was originally described as a cyclophilin B-binding protein whose overexpression in T cells causes a rise in intracellular calcium, thus activating transcription factors responsible for the early immune response. 1 Ca2 Ca2 X LS _ _ _ _ SpaceAfter=No 2 +-modulating +-modulat ADJ JJ Degree=Pos _ _ _ _ 3 cyclophilin cyclophilin NOUN NN Number=Sing _ _ _ _ 4 ligand ligand NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 CAML CAML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 originally originally ADV RB _ _ _ _ _ 10 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 cyclophilin cyclophilin NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 19 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 causes cause VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 rise rise NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 28 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 thus thus ADV RB _ _ _ _ _ 31 activating activat VERB VBG VerbForm=Ger _ _ _ _ 32 transcription transcription NOUN NN Number=Sing _ _ _ _ 33 factors factor NOUN NNS Number=Plur _ _ _ _ 34 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 early early ADJ JJ Degree=Pos _ _ _ _ 38 immune immune ADJ JJ Degree=Pos _ _ _ _ 39 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 172 # text = As reported here, structure-function analysis of the CAML gene in Jurkat T cells indicates that two of CAML's putative membrane-spanning domains are necessary and sufficient for the modulation of intracellular calcium. 1 As as SCONJ IN _ _ _ _ _ 2 reported report VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 structure structure NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 function function NOUN NN Number=Sing _ _ _ _ 8 analysis analysis NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 CAML CAML PROPN NNP Number=Sing _ _ _ _ 12 gene gene PROPN NNP Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 15 T T PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 indicates indicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 two two NUM CD NumType=Card _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 CAML CAML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 's 's PART POS _ _ _ _ _ 23 putative putative ADJ JJ Degree=Pos _ _ _ _ 24 membrane membrane NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 spanning spanning NOUN NN Number=Sing _ _ _ _ 27 domains domain NOUN NNS Number=Plur _ _ _ _ 28 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 modulation modulation NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 37 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 173 # text = We propose that the hydrophobic C-terminal tail of CAML forms its effector domain, thus implicating the N-terminal hydrophilic domain in a regulatory role. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 hydrophobic hydrophobic ADJ JJ Degree=Pos _ _ _ _ 6 C- C- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 terminal terminal NOUN NN Number=Sing _ _ _ _ 8 tail tail NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 CAML caml ADJ JJ Degree=Pos _ _ _ _ 11 forms form NOUN NNS Number=Plur _ _ _ _ 12 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 effector effector NOUN NN Number=Sing _ _ _ _ 14 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 thus thus ADV RB _ _ _ _ _ 17 implicating implicate VERB VBG VerbForm=Ger _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 N- n- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 21 hydrophilic hydrophilic ADJ JJ Degree=Pos _ _ _ _ 22 domain domain NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 26 role role NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 174 # text = These findings define a novel protein motif that functions in intracellular calcium signaling. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 define define VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 novel novel NOUN NN Number=Sing _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 motif motif SCONJ IN _ _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 functions function NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 12 calcium calcium NOUN NN Number=Sing _ _ _ _ 13 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 175 # text = Document 00300255 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300255 00300255 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 176 # text = Regulation of interleukin-1beta transcription by Epstein-Barr virus involves a number of latent proteins via their interaction with RBP. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 interleukin interleukin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 beta beta NOUN NN Number=Sing _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 Barr Barr PROPN NNP Number=Sing _ _ _ _ 11 virus virus NOUN NN Number=Sing _ _ _ _ 12 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 number number NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 latent latent ADJ JJ Degree=Pos _ _ _ _ 17 proteins protein NOUN NNS Number=Plur _ _ _ _ 18 via via ADP IN _ _ _ _ _ 19 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 interaction interaction NOUN NN Number=Sing _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 RBP RBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 177 # text = Epstein-Barr virus (EBV) infects B cells, resulting in the outgrowth of immortalised lymphoblastoid cell lines (LCLs). 1 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 Barr Barr PROPN NNP Number=Sing _ _ _ _ 4 virus virus NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 infects infect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 B b ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 resulting result VERB VBG VerbForm=Ger _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 outgrowth outgrowth NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 immortalised immortalise VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 lymphoblastoid lymphoblastoid NOUN NN Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 lines line NOUN NNS Number=Plur _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 LCLs LCL NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 178 # text = Here, we demonstrate through the use of intracellular staining that interleukin-1beta (IL-1beta) is expressed in LCLs and investigate the influence of the individual latent proteins on the expression of IL-1beta. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 through through ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 use use NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 10 staining staining NOUN NN Number=Sing _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 interleukin interleukin VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 13 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 beta beta NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 LCLs LCLs NOUN NNS Number=Plur _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 influence influence NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 individual individual ADJ JJ Degree=Pos _ _ _ _ 32 latent latent ADJ JJ Degree=Pos _ _ _ _ 33 proteins protein NOUN NNS Number=Plur _ _ _ _ 34 on on ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 179 # text = Using RT-PCR, IL-1beta was shown to be up-regulated in EBV-transformed LCLs as well as in group III Burkitt's lymphoma (BL) cell lines, compared with group I BL cell lines. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 RT Rt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 PCR PCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 beta beta NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 up up ADP IN _ _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 LCLs LCL NOUN NNS Number=Plur _ _ _ _ 22 as as ADV RB _ _ _ _ _ 23 well well ADV RB Degree=Pos _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 group group NOUN NN Number=Sing _ _ _ _ 27 III iii PROPN NNP Number=Sing _ _ _ _ 28 Burkitt Burkitt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 's 's PART POS _ _ _ _ _ 30 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 BL BL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 with with ADP IN _ _ _ _ _ 39 group group NOUN NN Number=Sing _ _ _ _ 40 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 41 BL Bl AUX MD VerbForm=Fin _ _ _ _ 42 cell cell VERB VB VerbForm=Inf _ _ _ _ 43 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 180 # text = The up-regulation of IL-1beta message could be mediated by the latent membrane protein-1, EBV nuclear proteins 2, 3, 4, and 6 genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 beta beta NOUN NN Number=Sing _ _ _ _ 9 message message NOUN NN Number=Sing _ _ _ _ 10 could could AUX MD VerbForm=Fin _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 latent latent ADJ JJ Degree=Pos _ _ _ _ 16 membrane membrane NOUN NN Number=Sing _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 EBV EBV VERB VBP Abbr=Yes|Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 22 proteins protein NOUN NNS Number=Plur _ _ _ _ 23 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 6 6 NUM CD NumType=Card _ _ _ _ 31 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 181 # text = Electrophoretic mobility shift assays (EMSAs) demonstrated that the -300 region of the IL-1beta promoter, which contains a nuclear factor-kappaB (NF-kappaB) binding site, contained a functional RBP binding site. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assays assay NOUN NNS Number=Plur _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 EMSAs EMSAs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 - - SYM SYM _ _ _ _ SpaceAfter=No 12 300 300 NUM CD NumType=Card _ _ _ _ 13 region region NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 beta beta NOUN NN Number=Sing _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 -kappaB -kappaB PROPN NNP Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 binding bind VERB VBG VerbForm=Ger _ _ _ _ 33 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 functional functional ADJ JJ Degree=Pos _ _ _ _ 38 RBP Rbp PROPN NNP Number=Sing _ _ _ _ 39 binding bind VERB VBG VerbForm=Ger _ _ _ _ 40 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 182 # text = Binding of RBP to this site could be inhibited by addition of EBV nuclear proteins 3 and 6, suggesting that these proteins displace RBP from its recognition sequence, removing transcriptional repression and allowing gene transcription to occur. 1 Binding binding NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 RBP RBP PROPN NNP Number=Sing _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 site site NOUN NN Number=Sing _ _ _ _ 7 could could AUX MD VerbForm=Fin _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 addition addition NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 EBV EBV PROPN NNP Number=Sing _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 proteins protein NOUN NNS Number=Plur _ _ _ _ 16 3 3 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 23 proteins protein NOUN NNS Number=Plur _ _ _ _ 24 displace displace VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 RBP Rbp PROPN NNP Number=Sing _ _ _ _ 26 from from ADP IN _ _ _ _ _ 27 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 28 recognition recognition NOUN NN Number=Sing _ _ _ _ 29 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 removing remove VERB VBG VerbForm=Ger _ _ _ _ 32 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 33 repression repression NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 allowing allow VERB VBG VerbForm=Ger _ _ _ _ 36 gene gene ADJ JJ Degree=Pos _ _ _ _ 37 transcription transcription NOUN NN Number=Sing _ _ _ _ 38 to to PART TO _ _ _ _ _ 39 occur occur VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 183 # text = In group I BL cells, containing low levels of NF-kappaB, only RBP binding was observed in EMSAs, whereas NF-kappaB binding could be demonstrated in EBV-transformed B cell lines containing high levels of activated NF-kappaB. 1 In in ADP IN _ _ _ _ _ 2 group group NOUN NN Number=Sing _ _ _ _ 3 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 4 BL Bl VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 containing contain VERB VBG VerbForm=Ger _ _ _ _ 8 low low ADJ JJ Degree=Pos _ _ _ _ 9 levels level NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 only only ADV RB _ _ _ _ _ 16 RBP RBP PROPN NNP Number=Sing _ _ _ _ 17 binding binding VERB VBG VerbForm=Ger _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 EMSAs EMSAs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 whereas whereas SCONJ IN _ _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 27 binding binding VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 28 could could AUX MD VerbForm=Fin _ _ _ _ 29 be be AUX VB VerbForm=Inf _ _ _ _ 30 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 B b NOUN NN Number=Sing _ _ _ _ 36 cell cell NOUN NN Number=Sing _ _ _ _ 37 lines line NOUN NNS Number=Plur _ _ _ _ 38 containing contain VERB VBG VerbForm=Ger _ _ _ _ 39 high high ADJ JJ Degree=Pos _ _ _ _ 40 levels level NOUN NNS Number=Plur _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 184 # text = In addition, the expression of latent membrane protein-1 led to activation of NF-kappaB that was capable of binding the IL-1beta promoter. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 latent latent ADJ JJ Degree=Pos _ _ _ _ 8 membrane membrane NOUN NN Number=Sing _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 led lead VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 capable capable ADJ JJ Degree=Pos _ _ _ _ 22 of of SCONJ IN _ _ _ _ _ 23 binding bind VERB VBG VerbForm=Ger _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 beta beta NOUN NN Number=Sing _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 185 # text = The study demonstrates that EBV can up-regulate IL-1beta expression, possibly by using RBP, NF-kappaB, or both. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 EBV EBV PROPN NNP Number=Sing _ _ _ _ 6 can can AUX MD VerbForm=Fin _ _ _ _ 7 up up ADV RB _ _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 beta beta NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 possibly possibly ADV RB _ _ _ _ _ 17 by by SCONJ IN _ _ _ _ _ 18 using use VERB VBG VerbForm=Ger _ _ _ _ 19 RBP RBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 both both DET DT _ _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 186 # text = Copyright 1998 Academic Press. 1 Copyright copyright NOUN NN Number=Sing _ _ _ _ 2 1998 1998 NUM CD NumType=Card _ _ _ _ 3 Academic academic PROPN NNP Number=Sing _ _ _ _ 4 Press Press PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 187 # text = Document 00300256 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300256 00300256 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 188 # text = Essential role of alveolar macrophages in intrapulmonary activation of NF-kappaB. 1 Essential essential ADJ JJ Degree=Pos _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 alveolar alveolar ADJ JJ Degree=Pos _ _ _ _ 5 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 intrapulmonary intrapulmonary ADJ JJ Degree=Pos _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 189 # text = Acute inflammatory injury in rat lung induced by deposition of immunoglobulin G immune complexes requires expression of cytokines and chemokines as well as activation of the transcription factor nuclear factor (NF)-kappaB. 1 Acute Acute ADV RB _ _ _ _ _ 2 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 3 injury injury NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 rat rat NOUN NN Number=Sing _ _ _ _ 6 lung lung NOUN NN Number=Sing _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 deposition deposition NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 12 G g NOUN NN Number=Sing _ _ _ _ 13 immune immune PRON PRP _ _ _ _ _ 14 complexes complexe VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 chemokines chemokine NOUN NNS Number=Plur _ _ _ _ 21 as as ADV RB _ _ _ _ _ 22 well well ADV RB Degree=Pos _ _ _ _ 23 as as ADP IN _ _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 factor factor NOUN NN Number=Sing _ _ _ _ 29 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 190 # text = There is little direct evidence regarding the role of alveolar macrophages in these activation events. 1 There there PRON EX _ _ _ _ _ 2 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 little little ADJ JJ Degree=Pos _ _ _ _ 4 direct direct ADJ JJ Degree=Pos _ _ _ _ 5 evidence evidence NOUN NN Number=Sing _ _ _ _ 6 regarding regard VERB VBG VerbForm=Ger _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 alveolar alveolar ADJ JJ Degree=Pos _ _ _ _ 11 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 events event NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 191 # text = In the present studies, rat lungs were depleted of alveolar macrophages by airway instillation of liposome-encapsulated dichloromethylene diphosphonate. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 rat rat NOUN NN Number=Sing _ _ _ _ 7 lungs lung NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 depleted deplet VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 alveolar alveolar ADJ JJ Degree=Pos _ _ _ _ 12 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 airway airway NOUN NN Number=Sing _ _ _ _ 15 instillation instillation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 liposome liposome ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 encapsulated encapsulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 dichloromethylene dichloromethylene NOUN NN Number=Sing _ _ _ _ 21 diphosphonate diphosphonate NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 192 # text = These procedures, which greatly reduced the number of retrievable alveolar macrophages, suppressed activation of lung NF-kappaB in the inflammatory model. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 procedures procedure NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 greatly greatly ADV RB _ _ _ _ _ 6 reduced reduce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 number number NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 retrievable retrievable ADJ JJ Degree=Pos _ _ _ _ 11 alveolar alveolar NOUN NN Number=Sing _ _ _ _ 12 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 lung lung NOUN NN Number=Sing _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 24 model model NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 193 # text = In addition, bronchoalveolar lavage levels of tumor necrosis factor-alpha (TNF-alpha) and the CXC chemokine, macrophage inflammatory protein-2, were substantially reduced. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 bronchoalveolar bronchoalveolar ADJ JJ Degree=Pos _ _ _ _ 5 lavage lavage NOUN NN Number=Sing _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 tumor tumor NOUN NN Number=Sing _ _ _ _ 9 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 alpha alpha NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 CXC CXC PROPN NNP Number=Sing _ _ _ _ 21 chemokine chemokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 24 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 substantially substantially ADV RB _ _ _ _ _ 31 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 194 # text = In parallel, upregulation of the lung vascular adhesion molecule, intercellular adhesion molecule-1, was greatly reduced by intrapulmonary instillation of phosphonate-containing liposomes. 1 In in ADP IN _ _ _ _ _ 2 parallel parallel NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 lung lung ADJ JJ Degree=Pos _ _ _ _ 8 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 9 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 10 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 intercellular intercellular ADJ JJ Degree=Pos _ _ _ _ 13 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 14 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 greatly greatly ADV RB _ _ _ _ _ 20 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 intrapulmonary intrapulmonary ADJ JJ Degree=Pos _ _ _ _ 23 instillation instillation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 phosphonate phosphonate NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 containing contain VERB VBG VerbForm=Ger _ _ _ _ 28 liposomes liposome NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 195 # text = Neutrophil accumulation and development of lung injury were also substantially diminished. 1 Neutrophil Neutrophil ADJ JJ Degree=Pos _ _ _ _ 2 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 development development NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 lung lung NOUN NN Number=Sing _ _ _ _ 7 injury injury NOUN NN Number=Sing _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 also also ADV RB _ _ _ _ _ 10 substantially substantially ADV RB _ _ _ _ _ 11 diminished diminish VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 196 # text = Lung instillation of TNF-alpha in alveolar macrophage-depleted rats restored the NF-kappaB activation response in whole lung. 1 Lung lung ADJ JJ Degree=Pos _ _ _ _ 2 instillation instillation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 alveolar alveolar ADJ JJ Degree=Pos _ _ _ _ 9 macrophage macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 depleted deplet VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 rats rat NOUN NNS Number=Plur _ _ _ _ 13 restored restore VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 whole whole ADJ JJ Degree=Pos _ _ _ _ 22 lung lung NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 197 # text = These data suggest that, in this inflammatory model, initial activation of NF-kappaB occurs in alveolar macrophages and the ensuing production of TNF-alpha may propagate NF-kappaB activation to other cell types in the lung. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 9 model model NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 initial initial ADJ JJ Degree=Pos _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 17 occurs occur NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 alveolar alveolar ADJ JJ Degree=Pos _ _ _ _ 20 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 ensuing ensue VERB VBG VerbForm=Ger _ _ _ _ 24 production production NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 alpha alpha PROPN NNP Number=Sing _ _ _ _ 29 may may AUX MD VerbForm=Fin _ _ _ _ 30 propagate propagate VERB VB VerbForm=Inf _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 34 activation activation NOUN NN Number=Sing _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 other other ADJ JJ Degree=Pos _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 types type NOUN NNS Number=Plur _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 lung lung NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 198 # text = Document 00300258 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300258 00300258 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 199 # text = Suppression of MHC class II expression by human class II trans-activator constructs lacking the N-terminal domain. 1 Suppression Suppression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 MHC MHC PROPN NNP Number=Sing _ _ _ _ 4 class class NOUN NN Number=Sing _ _ _ _ 5 II ii NUM CD NumType=Card _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 class class NOUN NN Number=Sing _ _ _ _ 10 II ii NUM CD NumType=Card _ _ _ _ 11 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 activator activator NOUN NN Number=Sing _ _ _ _ 14 constructs construct NOUN NNS Number=Plur _ _ _ _ 15 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 N- n- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 terminal terminal NOUN NN Number=Sing _ _ _ _ 19 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 200 # text = The class II trans-activator (CIITA) is a bi- or multi-functional domain protein which plays a critical role in the expression of MHC class II genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 class class NOUN NN Number=Sing _ _ _ _ 3 II ii NUM CD NumType=Card _ _ _ _ 4 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 - - PUNCT : _ _ _ _ SpaceAfter=No 6 activator activator NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 bi bi NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 multi-functional multi-functional ADJ JJ Degree=Pos _ _ _ _ 16 domain domain NOUN NN Number=Sing _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 critical critical ADJ JJ Degree=Pos _ _ _ _ 22 role role NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 MHC MHC PROPN NNP Number=Sing _ _ _ _ 28 class class NOUN NN Number=Sing _ _ _ _ 29 II ii NUM CD NumType=Card _ _ _ _ 30 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 201 # text = We report that removal of the N-terminal 151 amino acids, encompassing all of the acidic domain but leaving intact the proline/serine/threonine-rich domain, results in a mutant protein with potent suppressive properties for MHC class II expression. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 removal removal NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 N- n- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 terminal terminal NOUN NN Number=Sing _ _ _ _ 9 151 151 NUM CD NumType=Card _ _ _ _ 10 amino amino NOUN NN Number=Sing _ _ _ _ 11 acids acid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 encompassing encompasse VERB VBG VerbForm=Ger _ _ _ _ 14 all all DET DT _ _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 acidic acidic ADJ JJ Degree=Pos _ _ _ _ 18 domain domain NOUN NN Number=Sing _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 leaving leave VERB VBG VerbForm=Ger _ _ _ _ 21 intact intact ADV RB _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 proline proline NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 / / PUNCT , _ _ _ _ SpaceAfter=No 25 serine/threonine-rich serine/threonine-rich NOUN NN Number=Sing _ _ _ _ 26 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 results result NOUN NNS Number=Plur _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 32 protein protein NOUN NN Number=Sing _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 potent potent NOUN NN Number=Sing _ _ _ _ 35 suppressive suppressive ADJ JJ Degree=Pos _ _ _ _ 36 properties property NOUN NNS Number=Plur _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 MHC MHC PROPN NNP Number=Sing _ _ _ _ 39 class class NOUN NN Number=Sing _ _ _ _ 40 II ii NUM CD NumType=Card _ _ _ _ 41 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 202 # text = HeLa cells stably or transiently transfected with mutant CIITA constructs showed up to 99% suppression of MHC class II antigen induction by IFN-gamma and marked suppression of HLA-DRA mRNA expression. 1 HeLa Hela PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 stably stably ADV RB _ _ _ _ _ 4 or or CCONJ CC _ _ _ _ _ 5 transiently transiently ADV RB _ _ _ _ _ 6 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 9 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 10 constructs construct NOUN NNS Number=Plur _ _ _ _ 11 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 up up ADP RP _ _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 99 99 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 % % SYM NN Number=Sing _ _ _ _ 16 suppression suppression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 MHC MHC PROPN NNP Number=Sing _ _ _ _ 19 class class NOUN NN Number=Sing _ _ _ _ 20 II ii NUM CD NumType=Card _ _ _ _ 21 antigen antigen NUM CD NumType=Card _ _ _ _ 22 induction induction NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 gamma gamma NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 suppression suppression NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 DRA DRA PROPN NNP Number=Sing _ _ _ _ 34 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 203 # text = Transient transfection of a B lymphoma line resulted in up to 89% reduction of constitutive MHC class II expression within 5 days and suppression of HLA-DRA mRNA synthesis. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 transfection transfection NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 B b ADJ JJ Degree=Pos _ _ _ _ 6 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 7 line line NOUN NN Number=Sing _ _ _ _ 8 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 in in ADV RB _ _ _ _ _ 10 up up ADP IN _ _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 89 89 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 % % SYM NN Number=Sing _ _ _ _ 14 reduction reduction NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 17 MHC MHC PROPN NNP Number=Sing _ _ _ _ 18 class class NOUN NN Number=Sing _ _ _ _ 19 II ii NUM CD NumType=Card _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 within within ADP IN _ _ _ _ _ 22 5 5 NUM CD NumType=Card _ _ _ _ 23 days day NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 suppression suppression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 DRA DRA PROPN NNP Number=Sing _ _ _ _ 30 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 31 synthesis synthesis PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 204 # text = Document 00300264 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300264 00300264 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 205 # text = Regulation of jun and fos gene expression in human monocytes by the macrophage colony-stimulating factor. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 jun jun NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 fos fo NOUN NNS Number=Plur _ _ _ _ 6 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 14 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 206 # text = The macrophage colony-stimulating factor (M-CSF) is required for the growth and differentiation of mononuclear phagocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 3 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 stimulating stimulating NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 CSF Csf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 growth growth NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 21 phagocytes phagocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 207 # text = However, the signaling events responsible for these effects remain unclear. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 signaling signaling VERB VBG VerbForm=Ger _ _ _ _ 5 events event NOUN NNS Number=Plur _ _ _ _ 6 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 9 effects effect NOUN NNS Number=Plur _ _ _ _ 10 remain remain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 unclear unclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 208 # text = The present studies have examined the effects of M-CSF on potential signaling pathways involving expression of the jun and fos early response genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 effects effect NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 M- M- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 CSF CSF NOUN NN Number=Sing _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 potential potential ADJ JJ Degree=Pos _ _ _ _ 13 signaling signaling NOUN NN Number=Sing _ _ _ _ 14 pathways pathway NOUN NNS Number=Plur _ _ _ _ 15 involving involve VERB VBG VerbForm=Ger _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 jun jun NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 fos fo NOUN NNS Number=Plur _ _ _ _ 22 early early ADJ JJ Degree=Pos _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ _ 24 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 209 # text = Low levels of c-jun transcripts were detectable in resting human peripheral blood monocytes. 1 Low low VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 c- c- SYM NFP _ _ _ _ SpaceAfter=No 5 jun jun ADJ JJ Degree=Pos _ _ _ _ 6 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 9 in in SCONJ IN _ _ _ _ _ 10 resting rest VERB VBG VerbForm=Ger _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 13 blood blood NOUN NN Number=Sing _ _ _ _ 14 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 210 # text = Treatment of these cells with 10(3) units/ml human recombinant M-CSF was associated with rapid and transient increases in c-jun mRNA levels. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 units unit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 ml ml ADJ JJ Degree=Pos _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 recombinant recombinant NOUN NN Number=Sing _ _ _ _ 15 M- M- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 CSF CSF PROPN NNP Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 transient transient ADJ JJ Degree=Pos _ _ _ _ 23 increases increase NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 c- c- SYM NFP _ _ _ _ SpaceAfter=No 26 jun jun NOUN NN Number=Sing _ _ _ _ 27 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 28 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 211 # text = Nuclear run-on assays and mRNA stability studies demonstrated that M-CSF regulates c-jun expression by both an increase in transcription rate and a prolongation in the half-life of c-jun transcripts. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 run run VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 on on ADP IN _ _ _ _ _ 5 assays assay NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 8 stability stability NOUN NN Number=Sing _ _ _ _ 9 studies study NOUN NNS Number=Plur _ _ _ _ 10 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 12 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 CSF Csf NOUN NN Number=Sing _ _ _ _ 15 regulates regulate NOUN NNS Number=Plur _ _ _ _ 16 c- c- PUNCT , _ _ _ _ SpaceAfter=No 17 jun jun ADJ JJ Degree=Pos _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 both both CCONJ CC _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 increase increase NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 rate rate NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 prolongation prolongation NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 half half NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 life life NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 c- c- SYM NFP _ _ _ _ SpaceAfter=No 36 jun jun ADJ JJ Degree=Pos _ _ _ _ 37 transcripts transcript NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 212 # text = M-CSF treatment was also associated with a rapid induction of the jun-B gene, although expression of this gene was prolonged compared to that of c-jun. 1 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 CSF Csf NOUN NN Number=Sing _ _ _ _ 4 treatment treatment NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 11 induction induction NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 -B -b NOUN NN Number=Sing _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 although although SCONJ IN _ _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 prolonged prolonge VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 compared compare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 c- c- SYM NFP _ _ _ _ SpaceAfter=No 30 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 213 # text = We further demonstrate that M-CSF increases c-fos mRNA levels in human monocytes through control at both the transcriptional and posttranscriptional levels. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 CSF Csf NOUN NN Number=Sing _ _ _ _ 8 increases increase NOUN NNS Number=Plur _ _ _ _ 9 c- c- PUNCT , _ _ _ _ SpaceAfter=No 10 fos fo NOUN NNS Number=Plur _ _ _ _ 11 mRNA mRNa ADP IN _ _ _ _ _ 12 levels level NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 16 through through ADP IN _ _ _ _ _ 17 control control NOUN NN Number=Sing _ _ _ _ 18 at at ADP IN _ _ _ _ _ 19 both both CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 posttranscriptional posttranscriptional ADJ JJ Degree=Pos _ _ _ _ 24 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 214 # text = Maximal induction of the c-fos gene was followed by that for the fos-B gene. 1 Maximal Maximal ADJ JJ Degree=Pos _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 fos fos NOUN NNS Number=Plur _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 followed follow VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 B b ADJ JJ Degree=Pos _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 215 # text = Moreover, M-CSF-induced expression of the fos-related gene, fra-1, was delayed compared to that for both c-fos and fos-B. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 M- M- SYM NFP _ _ _ _ SpaceAfter=No 4 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 related related ADJ JJ Degree=Pos _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 fra fra NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 delayed delay ADJ JJ Degree=Pos _ _ _ _ 20 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 both both DET DT _ _ _ _ _ 25 c- c- SYM SYM _ _ _ _ SpaceAfter=No 26 fos fo NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 216 # text = Taken together, the results indicate that M-CSF treatment is associated with differential activation of multiple members of the jun/fos family and that expression of these genes could contribute to nuclear signaling mechanisms that regulate a specific program of monocyte differentiation. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 CSF Csf NOUN NN Number=Sing _ _ _ _ 11 treatment treatment NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 differential differential NOUN NN Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 19 members member NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 / / PUNCT , _ _ _ _ SpaceAfter=No 24 fos fos NOUN NN Number=Sing _ _ _ _ 25 family family NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 31 genes gene NOUN NNS Number=Plur _ _ _ _ 32 could could AUX MD VerbForm=Fin _ _ _ _ 33 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 34 to to PART TO _ _ _ _ _ 35 nuclear nuclear VERB VB VerbForm=Inf _ _ _ _ 36 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 37 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 38 that that PRON WDT PronType=Rel _ _ _ _ 39 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 40 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 41 specific specific ADJ JJ Degree=Pos _ _ _ _ 42 program program NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 45 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 217 # text = Document 00300280 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300280 00300280 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 218 # text = Uncoupling activation-dependent HS1 phosphorylation from nuclear factor of activated T cells transcriptional activation in Jurkat T cells: differential signaling through CD3 and the costimulatory receptors CD2 and CD28. CD3, CD2, and CD28 are functionally distinct receptors on T lymphocytes. 1 Uncoupling Uncoupl VERB VBG VerbForm=Ger _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 5 HS1 Hs1 NOUN NN Number=Sing _ _ _ _ 6 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 18 T T PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 : : PUNCT : _ _ _ _ _ 21 differential differential ADJ JJ Degree=Pos _ _ _ _ 22 signaling signaling NOUN NN Number=Sing _ _ _ _ 23 through through ADP IN _ _ _ _ _ 24 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 28 receptors receptor NOUN NNS Number=Plur _ _ _ _ 29 CD2 Cd2 NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 CD28. CD28. NOUN NN Number=Sing _ _ _ SpacesAfter=\s\n 32 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 CD2 Cd2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 38 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 39 functionally functionally ADV RB _ _ _ _ _ 40 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 41 receptors receptor NOUN NNS Number=Plur _ _ _ _ 42 on on ADP IN _ _ _ _ _ 43 T t PROPN NNP Number=Sing _ _ _ _ 44 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 219 # text = Engagement of any of these receptors induces the rapid tyrosine phosphorylation of a shared group of intracellular signaling proteins, including Vav, Cbl, p85 phosphoinositide 3-kinase, and the Src family kinases Lck and Fyn. 1 Engagement engagement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 any any DET DT _ _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 receptors receptor NOUN NNS Number=Plur _ _ _ _ 7 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 10 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 11 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 shared share VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 group group NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 18 signaling signaling NOUN NN Number=Sing _ _ _ _ 19 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 including include VERB VBG VerbForm=Ger _ _ _ _ 22 Vav Vav PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 Cbl Cbl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 p85 p85 NUM CD NumType=Card _ _ _ _ 27 phosphoinositide phosphoinositide NOUN NN Number=Sing _ _ _ _ 28 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT : _ _ _ _ SpaceAfter=No 30 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 Src Src ADJ JJ Degree=Pos _ _ _ _ 35 family family NOUN NN Number=Sing _ _ _ _ 36 kinases kinase NOUN NNS Number=Plur _ _ _ _ 37 Lck Lck PROPN NNP Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 Fyn Fyn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 220 # text = Ligation of CD3 also induces the tyrosine phosphorylation of HS1, a 75-kDa hematopoietic cell-specific intracellular signaling protein of unknown function. 1 Ligation Ligation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 8 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 HS1 HS1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 75 75 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kDa kDa NOUN NN Number=Sing _ _ _ _ 16 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 intracellular intracelular ADJ JJ Degree=Pos _ _ _ _ 21 signaling signale NOUN NN Number=Sing _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 unknown unknown ADJ JJ Degree=Pos _ _ _ _ 25 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 221 # text = We have examined changes in HS1 phosphorylation after differential stimulation of CD3, CD2, and CD28 to elucidate its role in T cells and to further delineate the signaling pathways recruited by these receptors. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 changes change NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 HS1 HS1 NUM CD NumType=Card _ _ _ _ 7 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 8 after after ADP IN _ _ _ _ _ 9 differential differential ADJ JJ Degree=Pos _ _ _ _ 10 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 CD2 Cd2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 elucidate elucidate VERB VB VerbForm=Inf _ _ _ _ 20 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 role role NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 further further ADV RB _ _ _ _ _ 28 delineate delineate VERB VB VerbForm=Inf _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 signaling signal NOUN NN Number=Sing _ _ _ _ 31 pathways pathway NOUN NNS Number=Plur _ _ _ _ 32 recruited recruit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 35 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 222 # text = Unlike ligation of CD3, stimulation with anti-CD28 mAb or CHO cells expressing the CD28 ligands CD80 or CD86 did not lead to tyrosine phosphorylation of HS1 in Jurkat T cells. 1 Unlike unlike ADP IN _ _ _ _ _ 2 ligation ligation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 anti-CD28 anti-CD28 NUM CD NumType=Card _ _ _ _ 9 mAb mAb NOUN NN Number=Sing _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 CHO Cho NOUN NN Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 expressing express VERB VBG VerbForm=Ger _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 16 ligands ligand VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 CD80 CD80 PROPN NNP Number=Sing _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 CD86 CD86 PROPN NNP Number=Sing _ _ _ _ 20 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 lead lead VERB VB VerbForm=Inf _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 tyrosine tyrosine VERB VB VerbForm=Inf _ _ _ _ 25 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 HS1 HS1 PROPN NNP Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 30 T T PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 223 # text = Additionally, no tyrosine phosphorylation of HS1 was induced by mitogenic pairs of anti-CD2 mAbs capable of activating the transcription factor NFAT (nuclear factor of activated T cells). 1 Additionally additionally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 no no DET DT _ _ _ _ _ 4 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 5 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 HS1 Hs1 PROPN NNP Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 12 pairs pair NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 anti-CD2 anti-CD2 NUM CD NumType=Card _ _ _ _ 15 mAbs mAb NOUN NNS Number=Plur _ _ _ _ 16 capable capable ADJ JJ Degree=Pos _ _ _ _ 17 of of SCONJ IN _ _ _ _ _ 18 activating activat VERB VBG VerbForm=Ger _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 224 # text = Costimulation through CD28 and/or CD2 did not modulate the CD3-dependent phosphorylation of HS1. 1 Costimulation Costimulation NOUN NN Number=Sing _ _ _ _ 2 through through ADP IN _ _ _ _ _ 3 CD28 CD28 NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 or or CCONJ CC _ _ _ _ _ 7 CD2 CD2 NUM CD NumType=Card _ _ _ _ 8 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 HS1 HS1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 225 # text = In vivo studies indicated that CD3-induced HSI phosphorylation was dependent upon both the Src family tyrosine kinase Lck and the tyrosine phosphatase CD45, did not require MEK1 kinase activity, and was regulated by protein kinase C activation. 1 In in ADP IN _ _ _ _ _ 2 vivo vivo ADJ JJ Degree=Pos _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 -induced -induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 HSI HSI NUM CD NumType=Card _ _ _ _ 9 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 upon upon ADP IN _ _ _ _ _ 13 both both CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 Src Src ADJ JJ Degree=Pos _ _ _ _ 16 family family NOUN NN Number=Sing _ _ _ _ 17 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 18 kinase kinase NOUN NN Number=Sing _ _ _ _ 19 Lck Lck NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 23 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 24 CD45 CD45 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 not not PART RB _ _ _ _ _ 28 require require VERB VB VerbForm=Inf _ _ _ _ 29 MEK1 MEK1 NUM CD NumType=Card _ _ _ _ 30 kinase kinase NOUN NN Number=Sing _ _ _ _ 31 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 35 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 protein protein NOUN NN Number=Sing _ _ _ _ 38 kinase kinase NOUN NN Number=Sing _ _ _ _ 39 C c NOUN NN Number=Sing _ _ _ _ 40 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 226 # text = Thus, although CD3, CD28, and CD2 activate many of the same signaling molecules, they differed in their capacity to induce the tyrosine phosphorylation of HSI. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 although although SCONJ IN _ _ _ _ _ 4 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 CD28 CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 CD2 CD2 NUM CD NumType=Card _ _ _ _ 10 activate activate NOUN NN Number=Sing _ _ _ _ 11 many many ADJ JJ Degree=Pos _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 same same ADJ JJ Degree=Pos _ _ _ _ 15 signaling signaling NOUN NN Number=Sing _ _ _ _ 16 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 19 differed differ VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 22 capacity capacity NOUN NN Number=Sing _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 induce induce VERB VB VerbForm=Inf _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 27 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 HSI HSI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 227 # text = Furthermore, activation-dependent tyrosine phosphorylation of HS1 was not required for NFAT transcriptional activation. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 6 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 7 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 HS1 Hs1 PROPN NNP Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 NFAT Nfat PROPN NNP Number=Sing _ _ _ _ 15 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 228 # text = Document 00300283 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300283 00300283 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 229 # text = Cytokine rescue from glucocorticoid induced apoptosis in T cells is mediated through inhibition of IkappaBalpha. 1 Cytokine Cytokine NOUN NN Number=Sing _ _ _ _ 2 rescue rescue NOUN NN Number=Sing _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 through through ADP IN _ _ _ _ _ 13 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 230 # text = We previously reported that dexamethasone (DEX), a synthetic glucocorticoid, causes apoptosis in mature 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 previously previously ADV RB _ _ _ _ _ 3 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 DEX DEX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 12 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 causes cause NOUN NNS Number=Plur _ _ _ _ 15 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 mature mature ADJ JJ Degree=Pos _ _ _ _ # sent_id = 231 # text = Th cell lines, and that this induction of cell death is prevented by specific cytokines, namely, by IL-2 in Th1 cells and by IL-4 in Th2 cells. 1 Th th ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 induction induction NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 death death NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 prevented prevent VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 specific specific ADJ JJ Degree=Pos _ _ _ _ 16 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 namely namely ADV RB _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 Th1 Th1 NUM CD NumType=Card _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 4 4 NUM CD NumType=Card _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 Th2 Th2 NUM CD NumType=Card _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 232 # text = We now show that this differential rescue by specific cytokines in Th cells correlates with the level of IkappaBalpha that is regulated by DEX and cytokines. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 now now ADV RB _ _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 differential differential NOUN NN Number=Sing _ _ _ _ 7 rescue rescue NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 Th th ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 level level NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 DEX Dex PROPN NNP Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 233 # text = In both cell types the cellular levels of IkappaBalpha mRNA and protein were evaluated by DEX treatment. 1 In in ADP IN _ _ _ _ _ 2 both both DET DT _ _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 types type NOUN NNS Number=Plur _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 7 levels level NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 10 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 evaluated evaluate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 DEX Dex PROPN NNP Number=Sing _ _ _ _ 17 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 234 # text = Interestingly, the DEX-mediated IkappaBalpha induction was completely inhibited by IL-2, but not IL-4, in Th1 cells, while the reverse profile was seen in Th2 cells. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 DEX DEX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 8 induction induction NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 completely completely ADV RB _ _ _ _ _ 11 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 not not ADV RB _ _ _ _ _ 19 IL Il ADV RB _ _ _ _ SpaceAfter=No 20 - - SYM SYM _ _ _ _ SpaceAfter=No 21 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 Th1 Th1 NUM CD NumType=Card _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 while while SCONJ IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 reverse reverse NOUN NN Number=Sing _ _ _ _ 30 profile profile NOUN NN Number=Sing _ _ _ _ 31 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 32 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 Th2 Th2 NUM CD NumType=Card _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 235 # text = In both cell types, the cytokine that inhibits the induction of IkappaBalpha by DEX, also rescues these cells from DEX-induced apoptosis, although the rescue cytokine is different in Th1 and Th2 cells. 1 In in ADP IN _ _ _ _ _ 2 both both DET DT _ _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 induction induction NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 DEX DEX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 also also ADV RB _ _ _ _ _ 18 rescues rescue VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 DEX DEX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 although although SCONJ IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 rescue rescue NOUN NN Number=Sing _ _ _ _ 30 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 31 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 different different ADJ JJ Degree=Pos _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 Th1 Th1 NUM CD NumType=Card _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 Th2 Th2 NUM CD NumType=Card _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 236 # text = Our results imply that T cells need to maintain a certain level of NF-kappaB transcriptional activity in order to survive; up- or down-regulation of nuclear NF kappaB through modulation of IkappaBalpha expression by cytokines or DEX may lead to cell survival or cell death, respectively. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 imply imply ADV RB _ _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 need need VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 maintain maintain VERB VB VerbForm=Inf _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 certain certain ADJ JJ Degree=Pos _ _ _ _ 12 level level NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 order order NOUN NN Number=Sing _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 survive survive VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 23 ; ; PUNCT , _ _ _ _ _ 24 up up ADP IN _ _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 down down NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 regulation regulation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 32 NF NF PROPN NNP Number=Sing _ _ _ _ 33 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 34 through through ADP IN _ _ _ _ _ 35 modulation modulation NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 38 expression expression NOUN NN Number=Sing _ _ _ _ 39 by by ADP IN _ _ _ _ _ 40 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 41 or or CCONJ CC _ _ _ _ _ 42 DEX DEX PROPN NNP Number=Sing _ _ _ _ 43 may may AUX MD VerbForm=Fin _ _ _ _ 44 lead lead VERB VB VerbForm=Inf _ _ _ _ 45 to to PART TO _ _ _ _ _ 46 cell cell VERB VB VerbForm=Inf _ _ _ _ 47 survival survival NOUN NN Number=Sing _ _ _ _ 48 or or CCONJ CC _ _ _ _ _ 49 cell cell NOUN NN Number=Sing _ _ _ _ 50 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 , , PUNCT , _ _ _ _ _ 52 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 237 # text = Document 00300291 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300291 00300291 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 238 # text = Tissue-specific regulation of the rabbit 15-lipoxygenase gene in erythroid cells by a transcriptional silencer. 1 Tissue- Tissue- SYM NFP _ _ _ _ SpaceAfter=No 2 specific specific ADJ JJ Degree=Pos _ _ _ _ 3 regulation regulation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 rabbit rabbit NOUN NN Number=Sing _ _ _ _ 7 15 15 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT : _ _ _ _ SpaceAfter=No 9 lipoxygenase lipoxygenase NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 17 silencer silencer NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 239 # text = The 15-lipoxygenase (lox) gene is expressed in a tissue-specific manner, predominantly in erythroid cells but also in airway epithelial cells and eosinophils. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 15 15 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 lipoxygenase lipoxygenase NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 lox lox NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 tissue- tissue- SYM SYM _ _ _ _ SpaceAfter=No 14 specific specific ADJ JJ Degree=Pos _ _ _ _ 15 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 predominantly predominantly ADV RB _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 but but CCONJ CC _ _ _ _ _ 22 also also ADV RB _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 airway airway ADJ JJ Degree=Pos _ _ _ _ 25 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 240 # text = We demonstrate in this report that the 5' flanking DNA of the 15-lox gene contains sequences which down-regulate its activity in a variety of non-erythroid cell lines but not in two erythroid cell lines. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 report report NOUN NN Number=Sing _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ' ' PUNCT `` _ _ _ _ _ 10 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 11 DNA dna NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 15 15 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 lox lox NOUN NN Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 sequences sequence NOUN NNS Number=Plur _ _ _ _ 20 which which PRON WDT PronType=Rel _ _ _ _ 21 down down ADV RB _ _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 24 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 variety variety NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 non-erythroid non-erythroid ADJ JJ Degree=Pos _ _ _ _ 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 lines line NOUN NNS Number=Plur _ _ _ _ 33 but but CCONJ CC _ _ _ _ _ 34 not not PART RB _ _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 two two NUM CD NumType=Card _ _ _ _ 37 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 241 # text = The element has characteristics of a transcriptional 'silencer' since it functions in both orientations. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 element element NOUN NN Number=Sing _ _ _ _ 3 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 characteristics characteristic NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 8 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 9 silencer silencer NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ' ' PUNCT '' _ _ _ _ _ 11 since since SCONJ IN _ _ _ _ _ 12 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 13 functions function VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 both both DET DT _ _ _ _ _ 16 orientations orientation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 242 # text = The main activity of the silencer has been mapped to the first 900 bp of 5' flanking DNA, which contains nine binding sites for a nuclear factor present in non-erythroid cells but not in erythroid cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 main main ADJ JJ Degree=Pos _ _ _ _ 3 activity activity NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 silencer silencer NOUN NN Number=Sing _ _ _ _ 7 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 9 mapped map VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 13 900 900 NUM CD NumType=Card _ _ _ _ 14 bp bp NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ' ' PUNCT `` _ _ _ _ _ 18 flanking flanking VERB VBG VerbForm=Ger _ _ _ _ 19 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 nine nine NUM CD NumType=Card _ _ _ _ 24 binding binding VERB VBG VerbForm=Ger _ _ _ _ 25 sites site NOUN NNS Number=Plur _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 29 factor factor NOUN NN Number=Sing _ _ _ _ 30 present present ADJ JJ Degree=Pos _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 non-erythroid non-erythroid ADJ JJ Degree=Pos _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ _ 34 but but CCONJ CC _ _ _ _ _ 35 not not PART RB _ _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 243 # text = These binding sites have similar sequences and multiple copies of the binding sites confer tissue-specific down-regulation when attached to a minimal lox promoter fragment. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 binding binding ADJ JJ Degree=Pos _ _ _ _ 3 sites site NOUN NNS Number=Plur _ _ _ _ 4 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 similar similar ADJ JJ Degree=Pos _ _ _ _ 6 sequences sequence NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 9 copies copy NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 sites site NOUN NNS Number=Plur _ _ _ _ 14 confer confer NOUN NN Number=Sing _ _ _ _ 15 tissue- tissue- SYM SYM _ _ _ _ SpaceAfter=No 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 down down NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 regulation regulation NOUN NN Number=Sing _ _ _ _ 20 when when ADV WRB PronType=Int _ _ _ _ 21 attached attach VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 25 lox lox NOUN NN Number=Sing _ _ _ _ 26 promoter promoter NOUN NN Number=Sing _ _ _ _ 27 fragment fragment NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 244 # text = The 5' flanking DNA also contains a cluster of three binding sites for the GATA family of transcription factors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 ' ' PUNCT `` _ _ _ _ _ 4 flanking flanking VERB VBG VerbForm=Ger _ _ _ _ 5 DNA dna NOUN NN Number=Sing _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 cluster cluster NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 three three NUM CD NumType=Card _ _ _ _ 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 sites site NOUN NNS Number=Plur _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 GATA GATA PROPN NNP Number=Sing _ _ _ _ 17 family family NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 245 # text = Document 00300292 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300292 00300292 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 246 # text = Nuclear appearance of a factor that binds the CD28 response element within the interleukin-2 enhancer correlates with interleukin-2 production. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 appearance appearance NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 10 response response NOUN NN Number=Sing _ _ _ _ 11 element element NOUN NN Number=Sing _ _ _ _ 12 within within ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 18 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 247 # text = Activation of T lymphocytes requires the combined signaling of the T cell receptor and costimulatory molecules such as CD28. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 5 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 signaling signaling NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 T T PROPN NNP Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 16 molecules molecule NOUN NNS Number=Plur _ _ _ _ 17 such such ADJ JJ Degree=Pos _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 CD28 CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 248 # text = The ability of T cells to produce interleukin-2 (IL-2) is a critical control point in T lymphocyte activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ability ability NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 produce produce VERB VB VerbForm=Inf _ _ _ _ 8 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 critical critical ADJ JJ Degree=Pos _ _ _ _ 19 control control NOUN NN Number=Sing _ _ _ _ 20 point point NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 249 # text = The IL-2 enhancer contains a functional motif named CD28 response element (CD28RE) that serves a role as a target for mitogenic T cell activation signals. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 6 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 functional functional ADJ JJ Degree=Pos _ _ _ _ 9 motif motif NOUN NN Number=Sing _ _ _ _ 10 named name VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 CD28 CD28 NUM CD NumType=Card _ _ _ _ 12 response response NOUN NN Number=Sing _ _ _ _ 13 element element NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 CD28RE CD28RE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 serves serve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 role role NOUN NN Number=Sing _ _ _ _ 21 as as ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 target target NOUN NN Number=Sing _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 26 T t PROPN NNP Number=Sing _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 250 # text = The CD28RE sequence reveals similarity to the consensus kappaB binding motif. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 CD28RE Cd28re NOUN NN Number=Sing _ _ _ _ 3 sequence sequence NOUN NN Number=Sing _ _ _ _ 4 reveals reveal NOUN NNS Number=Plur _ _ _ _ 5 similarity similarity NOUN NN Number=Sing _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 consensus consensus NOUN NN Number=Sing _ _ _ _ 9 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 10 binding binding VERB VBG VerbForm=Ger _ _ _ _ 11 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 251 # text = Here we demonstrate that CD28RE binds an inducible protein with a molecular mass of approximately 35 kDa called nuclear factor of mitogenic-activated T cells (NF-MATp35) that is clearly different from the known NF- kappaB/Rel family members. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 CD28RE Cd28re PRON EX _ _ _ _ _ 6 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 13 mass mass NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 approximately approximately ADV RB _ _ _ _ _ 16 35 35 NUM CD NumType=Card _ _ _ _ 17 kDa kDa PROPN NNP Number=Sing _ _ _ _ 18 called call VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 T T PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 MATp35 MATp35 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 that that PRON WDT PronType=Rel _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 clearly clearly ADV RB _ _ _ _ _ 35 different different ADJ JJ Degree=Pos _ _ _ _ 36 from from ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ _ 41 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 43 Rel Rel PROPN NNP Number=Sing _ _ _ _ 44 family family NOUN NN Number=Sing _ _ _ _ 45 members member NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 252 # text = Induction of NF-MATp35 was shown to depend on de novo protein synthesis and was restricted to T cells that received a mitogenic combination of T cell stimuli, not necessarily including CD28 signaling. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 MATp35 MATp35 PROPN NNP Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 depend depend VERB VB VerbForm=Inf _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 de de NOUN NN Number=Sing _ _ _ _ 12 novo novo NOUN NN Number=Sing _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=1|Tense=Past|VerbForm=Fin _ _ _ _ 17 restricted restrict VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 T t VERB VB VerbForm=Inf _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 that that PRON WDT PronType=Rel _ _ _ _ 22 received receive VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 25 combination combination NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 T t PROPN NNP Number=Sing _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 not not ADV RB _ _ _ _ _ 32 necessarily necessarily ADV RB _ _ _ _ _ 33 including include VERB VBG VerbForm=Ger _ _ _ _ 34 CD28 CD28 NUM CD NumType=Card _ _ _ _ 35 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 253 # text = Nonmitogenic T cell stimulation did not result in appearance of NF-MATp35. 1 Nonmitogenic Nonmitogenic PROPN NNP Number=Sing _ _ _ _ 2 T T PROPN NNP Number=Sing _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 5 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 result result VERB VB VerbForm=Inf _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 appearance appearance NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 MATp35 MATp35 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 254 # text = These results indicate that mitogenic combinations of T cell activation signals are integrated at the level of NF-MATp35 induction. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 6 combinations combination NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 signals signal NOUN NNS Number=Plur _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 integrated integrate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 at at ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 level level NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 MATp35 MATp35 PROPN NNP Number=Sing _ _ _ _ 21 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 255 # text = Similar to its effect on IL-2 production, cyclosporin 1 Similar similar ADJ JJ Degree=Pos _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 4 effect effect NOUN NN Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ # sent_id = 256 # text = A inhibited the induction of NF-MATp35. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 induction induction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 MATp35 MATp35 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 257 # text = Taken together, these data demonstrate that the nuclear appearance of NF-MATp35 shows excellent correlation with IL-2 production, which is a unique characteristic among nuclear factors implicated in the control of IL-2 gene expression. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 data data NOUN NN Number=Sing _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 appearance appearance NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 MATp35 MATp35 PROPN NNP Number=Sing _ _ _ _ 15 shows show VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 excellent excellent ADJ JJ Degree=Pos _ _ _ _ 17 correlation correlation NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ _ 22 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 unique unique ADJ JJ Degree=Pos _ _ _ _ 28 characteristic characteristic NOUN NN Number=Sing _ _ _ _ 29 among among ADP IN _ _ _ _ _ 30 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 31 factors factor NOUN NNS Number=Plur _ _ _ _ 32 implicated implicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 control control NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 2 2 NUM CD NumType=Card _ _ _ _ 40 gene gene NOUN NN Number=Sing _ _ _ _ 41 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 258 # text = Document 00300298 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300298 00300298 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 259 # text = Regulation of Id3 cell cycle function by Cdk-2-dependent phosphorylation. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Id3 Id3 NUM CD NumType=Card _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 cycle cycle NOUN NN Number=Sing _ _ _ _ 6 function function NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 Cdk Cdk PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 13 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 260 # text = The functions of basic helix-loop-helix (bHLH) transcription factors in activating differentiation-linked gene expression and in inducing G1 cell cycle arrest are negatively regulated by members of the Id family of HLH proteins. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 functions function NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 basic basic ADJ JJ Degree=Pos _ _ _ _ 5 helix-loop helix-loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 helix helix NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 bHLH bHLH NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 in in SCONJ IN _ _ _ _ _ 14 activating activate VERB VBG VerbForm=Ger _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 in in SCONJ IN _ _ _ _ _ 22 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 23 G1 G1 NUM CD NumType=Card _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 cycle cycle NOUN NN Number=Sing _ _ _ _ 26 arrest arrest NOUN NN Number=Sing _ _ _ _ 27 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 negatively negatively ADV RB _ _ _ _ _ 29 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 members member NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 Id id PROPN NNP Number=Sing _ _ _ _ 35 family family NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 HLH Hlh DET DT _ _ _ _ _ 38 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 261 # text = These bHLH antagonists are induced during a mitogenic signalling response, and they function by sequestering their bHLH targets in inactive heterodimers that are unable to bind to specific gene regulatory (E box) sequences. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 bHLH bhlh ADJ JJ Degree=Pos _ _ _ _ 3 antagonists antagonist NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 during during ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 9 signalling signalling NOUN NN Number=Sing _ _ _ _ 10 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 14 function function VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 by by SCONJ IN _ _ _ _ _ 16 sequestering sequester VERB VBG VerbForm=Ger _ _ _ _ 17 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 bHLH bHLh NOUN NN Number=Sing _ _ _ _ 19 targets target NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 22 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 23 that that PRON WDT PronType=Rel _ _ _ _ 24 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 unable unable ADJ JJ Degree=Pos _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 bind bind VERB VB VerbForm=Inf _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 specific specific ADJ JJ Degree=Pos _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ _ 31 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 E e NOUN NN Number=Sing _ _ _ _ 34 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 262 # text = Recently, cyclin E-Cdk2- and cyclin A-Cdk2-dependent phosphorylation of a single conserved serine residue (Ser5) in Id2 has been shown to occur during late G1-to-S phase transition of the cell cycle, and this neutralizes the function of Id2 in abrogating E-box-dependent bHLH homo- or heterodimer complex formation in vitro (E.Hara, M.Hall, and G.Peters, EMBO J.16:332-342, 1997). 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 cyclin cyclin NOUN NN Number=Sing _ _ _ _ 4 E- e- PUNCT : _ _ _ _ SpaceAfter=No 5 Cdk2 cdk2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 cyclin cyclin NOUN NN Number=Sing _ _ _ _ 9 A-Cdk2 A-Cdk2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 single single ADJ JJ Degree=Pos _ _ _ _ 16 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 serine serine NOUN NN Number=Sing _ _ _ _ 18 residue residue NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 Ser5 Ser5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 Id2 id2 NOUN NN Number=Sing _ _ _ _ 24 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 26 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 occur occur VERB VB VerbForm=Inf _ _ _ _ 29 during during ADP IN _ _ _ _ _ 30 late late ADJ JJ Degree=Pos _ _ _ _ 31 G1 g1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 to to ADP IN _ _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 S s NOUN NN Number=Sing _ _ _ _ 36 phase phase NOUN NN Number=Sing _ _ _ _ 37 transition transition NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 45 neutralizes neutralize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 function function NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 Id2 Id2 NUM CD NumType=Card _ _ _ _ 50 in in SCONJ IN _ _ _ _ _ 51 abrogating abrogat VERB VBG VerbForm=Ger _ _ _ _ 52 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 56 bHLH bHLh NOUN NN Number=Sing _ _ _ _ 57 homo homo NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 - - PUNCT , _ _ _ _ _ 59 or or CCONJ CC _ _ _ _ _ 60 heterodimer heterodimer ADJ JJR Degree=Cmp _ _ _ _ 61 complex complex ADJ JJ Degree=Pos _ _ _ _ 62 formation formation NOUN NN Number=Sing _ _ _ _ 63 in in ADP IN _ _ _ _ _ 64 vitro vitro PROPN NNP Number=Sing _ _ _ _ 65 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 66 E.Hara E.Hara PROPN NNP Number=Sing _ _ _ SpaceAfter=No 67 , , PUNCT , _ _ _ _ _ 68 M.Hall M.Hall PROPN NNP Number=Sing _ _ _ SpaceAfter=No 69 , , PUNCT , _ _ _ _ _ 70 and and CCONJ CC _ _ _ _ _ 71 G.Peters G.Peters PROPN NNP Number=Sing _ _ _ SpaceAfter=No 72 , , PUNCT , _ _ _ _ _ 73 EMBO EMBO PROPN NNP Number=Sing _ _ _ _ 74 J.16:332-342 J.16:332-342 NOUN NN Number=Sing _ _ _ SpaceAfter=No 75 , , PUNCT , _ _ _ _ _ 76 1997 1997 NUM CD NumType=Card _ _ _ SpaceAfter=No 77 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 78 . . PUNCT . _ _ _ _ _ # sent_id = 263 # text = We now show that an analogous cell-cycle-regulated phosphorylation of Id3 alters the specificity of Id3 for abrogating both E-box-dependent bHLH homo- or heterodimer complex formation in vitro and E-box-dependent reporter gene function in vivo. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 now now ADV RB _ _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 analogous analogous ADJ JJ Degree=Pos _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 cycle-regulated cycle-regulated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 Id3 Id3 NUM CD NumType=Card _ _ _ _ 13 alters alter NOUN NNS Number=Plur _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 specificity specificity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 Id3 Id3 NOUN NN Number=Sing _ _ _ _ 18 for for SCONJ IN _ _ _ _ _ 19 abrogating abrogat VERB VBG VerbForm=Ger _ _ _ _ 20 both both DET DT _ _ _ _ _ 21 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 25 bHLH bHLh NOUN NN Number=Sing _ _ _ _ 26 homo homo NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 heterodimer heterodimer ADJ JJR Degree=Cmp _ _ _ _ 30 complex complex ADJ JJ Degree=Pos _ _ _ _ 31 formation formation NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 vitro vitro NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 39 reporter reporter NOUN NN Number=Sing _ _ _ _ 40 gene gene NOUN NN Number=Sing _ _ _ _ 41 function function NOUN NN Number=Sing _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 vivo. vivo. NOUN NN Number=Sing _ _ _ _ # sent_id = 264 # text = Furthermore, compared with wild-type Id3, an Id3 Asp5 mutant (mimicking phosphorylation) is unable to promote cell cycle S phase entry in transfected fibroblasts, whereas an Id3 Ala5 mutant (ablating phosphorylation) displays an activity significantly greater than that of wild-type Id3 protein. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 type type NOUN NN Number=Sing _ _ _ _ 8 Id3 Id3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 Id3 Id3 NUM CD NumType=Card _ _ _ _ 12 Asp5 asp5 NOUN NN Number=Sing _ _ _ _ 13 mutant mutant NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 mimicking mimicking NOUN NN Number=Sing _ _ _ _ 16 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 unable unable ADJ JJ Degree=Pos _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 promote promote VERB VB VerbForm=Inf _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 cycle cycle NOUN NN Number=Sing _ _ _ _ 24 S 's PART POS _ _ _ _ _ 25 phase phase NOUN NN Number=Sing _ _ _ _ 26 entry entry NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 whereas whereas SCONJ IN _ _ _ _ _ 32 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 Id3 Id3 NOUN NN Number=Sing _ _ _ _ 34 Ala5 ala5 NOUN NN Number=Sing _ _ _ _ 35 mutant mutant NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 ablating ablat VERB VBG VerbForm=Ger _ _ _ _ 38 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 displays display VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 41 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 activity activity NOUN NN Number=Sing _ _ _ _ 43 significantly significantly ADV RB _ _ _ _ _ 44 greater greater ADJ JJR Degree=Cmp _ _ _ _ 45 than than ADP IN _ _ _ _ _ 46 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 47 of of ADP IN _ _ _ _ _ 48 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 type type NOUN NN Number=Sing _ _ _ _ 51 Id3 Id3 NUM CD NumType=Card _ _ _ _ 52 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 265 # text = Cdk2-dependent phosphorylation therefore provides a switch during late G1-to-S phase that both nullifies an early G1 cell cycle regulatory function of Id3 and modulates its target bHLH specificity. 1 Cdk2 Cdk2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 4 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 5 therefore therefore ADV RB _ _ _ _ _ 6 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 switch switch NOUN NN Number=Sing _ _ _ _ 9 during during ADP IN _ _ _ _ _ 10 late late ADJ JJ Degree=Pos _ _ _ _ 11 G1 G1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 to to ADP IN _ _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 S S NOUN NN Number=Sing _ _ _ _ 16 phase phase NOUN NN Number=Sing _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 both both ADV RB _ _ _ _ _ 19 nullifies nullify VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 early early ADJ JJ Degree=Pos _ _ _ _ 22 G1 g1 NOUN NN Number=Sing _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 cycle cycle NOUN NN Number=Sing _ _ _ _ 25 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 26 function function NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 Id3 Id3 NUM CD NumType=Card _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 modulates modulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 32 target target NOUN NN Number=Sing _ _ _ _ 33 bHLH bHLh NOUN NN Number=Sing _ _ _ _ 34 specificity specificity NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 266 # text = These data also demonstrate that the ability of Id3 to promote cell cycle S phase entry is not simply a function of its ability to modulate bHLH heterodimer-dependent gene expression and establish a biologically important mechanism through which Cdk2 and 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 ability ability NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 Id3 Id3 NOUN NN Number=Sing _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 promote promote VERB VB VerbForm=Inf _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 cycle cycle NOUN NN Number=Sing _ _ _ _ 14 S 's PART POS _ _ _ _ _ 15 phase phase NOUN NN Number=Sing _ _ _ _ 16 entry entry NOUN NN Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 not not PART RB _ _ _ _ _ 19 simply simply ADV RB _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 function function NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 ability ability NOUN NN Number=Sing _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 27 bHLH bHLH DET DT _ _ _ _ _ 28 heterodimer heterodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 establish establish VERB VB VerbForm=Inf _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 biologically biologically ADV RB _ _ _ _ _ 37 important important ADJ JJ Degree=Pos _ _ _ _ 38 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 39 through through ADP IN _ _ _ _ _ 40 which which PRON WDT PronType=Rel _ _ _ _ 41 Cdk2 Cdk2 NOUN NN Number=Sing _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ # sent_id = 267 # text = Id-bHLH functions are integrated in the coordination of cell proliferation and differentiation. 1 Id id ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 bHLH bHLh NOUN NN Number=Sing _ _ _ _ 4 functions function NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 integrated integrate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 coordination coordination NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 268 # text = Document 003002100 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002100 003002100 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 269 # text = Molecular and cellular analysis of human immunodeficiency virus-induced apoptosis in lymphoblastoid T-cell-line-expressing wild-type and mutated CD4 receptors. 1 Molecular Molecular ADJ JJ Degree=Pos _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 8 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 -induced -induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 lymphoblastoid lymphoblastoid ADJ JJ Degree=Pos _ _ _ _ 13 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 19 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 type type NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 mutated mutate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 CD4 CD4 NUM CD NumType=Card _ _ _ _ 25 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 270 # text = We have previously shown that the presence of the CD4 cytoplasmic tail is critical for human immunodeficiency virus (HIV)-induced apoptosis (J.Corbeil, M.Tremblay, and D.D.Richman, J.Exp.Med.183:39-48, 1996). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 presence presence NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 11 cytoplasmic cytoplasmic NOUN NN Number=Sing _ _ _ _ 12 tail tail NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 critical critical ADJ JJ Degree=Pos _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 18 virus virus NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 J.Corbeil J.Corbeil PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 M.Tremblay M.Tremblay PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 D.D.Richman D.D.Richman PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 J.Exp.Med J.Exp.Med PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 .183:39-48 .183:39-48 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 1996 1996 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 271 # text = We have pursued our investigation of the role of the CD4 transduction pathway in HIV-induced apoptosis. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 pursued pursue VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 5 investigation investigation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 12 transduction transduction NOUN NN Number=Sing _ _ _ _ 13 pathway pathway NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 HIV- HIV- SYM NFP _ _ _ _ SpaceAfter=No 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 272 # text = To do this, wild-type and mutant forms of the CD4 cytoplasmic tail were stably expressed in the lymphoblastoid T-cell line A2.01. 1 To to PART TO _ _ _ _ _ 2 do do VERB VB VerbForm=Inf _ _ _ _ 3 this this PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 type type NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 10 forms form NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 14 cytoplasmic cytoplasmic NOUN NN Number=Sing _ _ _ _ 15 tail tail NOUN NN Number=Sing _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 stably stably ADV RB _ _ _ _ _ 18 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 lymphoblastoid lymphoblastoid ADJ JJ Degree=Pos _ _ _ _ 22 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 line line NOUN NN Number=Sing _ _ _ _ 25 A2.01 a2.01 NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 273 # text = Apoptosis was prevented when CD4 truncated at residue 402 was expressed; however, cells expressing mutated receptors that do not associate with p56(lck) (mutated at the dicysteine motif and truncated at residue 418) but which conserved proximal domains of the cytoplasmic tail underwent apoptosis like wild- type CD4. 1 Apoptosis Apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 prevented prevent VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 when when ADV WRB PronType=Int _ _ _ _ 5 CD4 CD4 NUM CD NumType=Card _ _ _ _ 6 truncated truncate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 at at ADP IN _ _ _ _ _ 8 residue residue NOUN NN Number=Sing _ _ _ _ 9 402 402 NUM CD NumType=Card _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 12 ; ; PUNCT , _ _ _ _ _ 13 however however ADV RB _ _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 17 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 receptors receptor NOUN NNS Number=Plur _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 associate associate VERB VB VerbForm=Inf _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 p56 p56 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 lck lck NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 at at ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 dicysteine dicysteine NOUN NN Number=Sing _ _ _ _ 33 motif motif NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 truncated truncate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 at at ADP IN _ _ _ _ _ 37 residue residue NOUN NN Number=Sing _ _ _ _ 38 418 418 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 but but CCONJ CC _ _ _ _ _ 41 which which PRON WDT PronType=Int _ _ _ _ 42 conserved conserve VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 43 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 44 domains domains NOUN NNS Number=Plur _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 48 tail tail NOUN NN Number=Sing _ _ _ _ 49 underwent underwent ADJ JJ Degree=Pos _ _ _ _ 50 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 51 like like ADP IN _ _ _ _ _ 52 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT HYPH _ _ _ _ _ 54 type type NOUN NN Number=Sing _ _ _ _ 55 CD4 Cd4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 274 # text = The differences between wild-type and mutated receptors in the induction of apoptosis were not related to levels of p56(lck) or NF- kappaB activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 differences difference NOUN NNS Number=Plur _ _ _ _ 3 between between ADP IN _ _ _ _ _ 4 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 type type NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 receptors receptor NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 related related ADJ JJ Degree=Pos _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 levels level NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 p56 p56 NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 lck lck NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ _ 28 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 275 # text = Initial signaling through the CD4 receptor played a major role in the sensitization of HIV-infected T cells to undergo apoptosis. 1 Initial initial ADJ JJ Degree=Pos _ _ _ _ 2 signaling signaling NOUN NN Number=Sing _ _ _ _ 3 through through ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 played play VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 major major ADJ JJ Degree=Pos _ _ _ _ 10 role role NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 sensitization sensitization NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 HIV- HIV- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 undergo undergo VERB VB VerbForm=Inf _ _ _ _ 21 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 276 # text = Incubation of HIV-infected cells with monoclonal antibody (MAb) 13B8-2, which binds to CD4 in a region critical for dimerization of the receptor, prevented apoptosis without inhibiting HIV replication. 1 Incubation incubation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HIV- HIV- PUNCT : _ _ _ _ SpaceAfter=No 4 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 8 antibody antibody NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 MAb MAb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 13B8 13B8 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - SYM SYM _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 region region NOUN NN Number=Sing _ _ _ _ 23 critical critical ADJ JJ Degree=Pos _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 dimerization dimerization NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 prevented prevent VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 32 without without SCONJ IN _ _ _ _ _ 33 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 34 HIV HIV PROPN NNP Number=Sing _ _ _ _ 35 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 277 # text = Moreover, the apoptotic process was not related to Fas-Fas ligand interaction; however, an antagonistic anti-Fas MAb (ZB-4) enhanced apoptosis in HIV-infected cells without inducing apoptosis in uninfected cells. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 5 process process NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 related related ADJ JJ Degree=Pos _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 Fas Fas PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 Fas Fas PROPN NNP Number=Sing _ _ _ _ 13 ligand ligand NOUN NN Number=Sing _ _ _ _ 14 interaction interaction NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ; ; PUNCT , _ _ _ _ _ 16 however however ADV RB _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 antagonistic antagonistic ADJ JJ Degree=Pos _ _ _ _ 20 anti-Fas anti-Fas PROPN NNPS Number=Plur _ _ _ _ 21 MAb MAb PROPN NNP Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 ZB ZB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - SYM SYM _ _ _ _ SpaceAfter=No 25 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 HIV- HIV- NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 without without SCONJ IN _ _ _ _ _ 34 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 35 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 uninfected uninfected ADJ JJ Degree=Pos _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 278 # text = These observations demonstrate that CD4 signaling mediates HIV-induced apoptosis by a mechanism independent of Fas-Fas ligand interaction, does not require p56(lck) signaling, and may involve a critical region for CD4 dimerization. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 6 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 7 mediates mediate NOUN NNS Number=Plur _ _ _ _ 8 HIV- HIV- PUNCT , _ _ _ _ SpaceAfter=No 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 14 independent independent ADJ JJ Degree=Pos _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 Fas Fas PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 Fas Fas PROPN NNP Number=Sing _ _ _ _ 19 ligand ligand NOUN NN Number=Sing _ _ _ _ 20 interaction interaction NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 not not PART RB _ _ _ _ _ 24 require require VERB VB VerbForm=Inf _ _ _ _ 25 p56 p56 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 lck lck NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 signaling signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 may may AUX MD VerbForm=Fin _ _ _ _ 33 involve involve VERB VB VerbForm=Inf _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 critical critical ADJ JJ Degree=Pos _ _ _ _ 36 region region NOUN NN Number=Sing _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 CD4 CD4 NUM CD NumType=Card _ _ _ _ 39 dimerization dimerization NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 279 # text = Document 003002101 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002101 003002101 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 280 # text = Characterization of the human elk-1 promoter. 1 Characterization Characterization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 elk elk NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 281 # text = Potential role of a downstream intronic sequence for elk-1 gene expression in monocytes. 1 Potential potential ADJ JJ Degree=Pos _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 6 intronic intronic ADJ JJ Degree=Pos _ _ _ _ 7 sequence sequence NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 elk elk NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 282 # text = To characterize the human elk-1 promoter, we mapped the transcriptional start site and isolated elk-1-specific genomic phage clones that contained extensive upstream and downstream sequences. 1 To to PART TO _ _ _ _ _ 2 characterize characterize VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 elk elk NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 mapped map VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 14 start start NOUN NN Number=Sing _ _ _ _ 15 site site NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 elk elk NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - SYM SYM _ _ _ _ SpaceAfter=No 21 specific specific ADJ JJ Degree=Pos _ _ _ _ 22 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 23 phage phage NOUN NN Number=Sing _ _ _ _ 24 clones clone NOUN NNS Number=Plur _ _ _ _ 25 that that PRON WDT PronType=Rel _ _ _ _ 26 contained contain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 extensive extensive ADJ JJ Degree=Pos _ _ _ _ 28 upstream upstream NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 31 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 283 # text = A TATA-like motif was identified immediately upstream of the transcriptional start site. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 TATA TATA NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 like like ADJ JJ Degree=Pos _ _ _ _ 5 motif motif NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 immediately immediately ADV RB _ _ _ _ _ 9 upstream upstream NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 13 start start NOUN NN Number=Sing _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 284 # text = Functional analyses of DNA fragments containing the TATA element and the identification of a DNase I-hypersensitive chromatin site (HS 1) in close proximity to the TATA box suggest that the identified TATA motif is important for elk-1 transcription in vivo. 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 analyses analysis NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ _ 5 fragments fragment NOUN NNS Number=Plur _ _ _ _ 6 containing contain VERB VBG VerbForm=Ger _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 TATA TATa NOUN NN Number=Sing _ _ _ _ 9 element element NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 identification identification NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 DNase DNase NOUN NN Number=Sing _ _ _ _ 16 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 19 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 20 site site NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 HS h PROPN NNP Number=Sing _ _ _ _ 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 close close ADJ JJ Degree=Pos _ _ _ _ 27 proximity proximity NOUN NN Number=Sing _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 TATA TATa PROPN NNP Number=Sing _ _ _ _ 31 box box NOUN NN Number=Sing _ _ _ _ 32 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 33 that that SCONJ IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 identified identified ADJ JJ Degree=Pos _ _ _ _ 36 TATA TATa NOUN NN Number=Sing _ _ _ _ 37 motif motif NOUN NN Number=Sing _ _ _ _ 38 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 important important ADJ JJ Degree=Pos _ _ _ _ 40 for for ADP IN _ _ _ _ _ 41 elk elk NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 - - PUNCT , _ _ _ _ SpaceAfter=No 43 1 1 NUM CD NumType=Card _ _ _ _ 44 transcription transcription NOUN NN Number=Sing _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 vivo. vivo. NOUN NN Number=Sing _ _ _ _ # sent_id = 285 # text = Sequences upstream and downstream from the TATA box were found to contribute to elk-1 promoter activity. 1 Sequences Sequences NOUN NNS Number=Plur _ _ _ _ 2 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 TATA TATa PROPN NNP Number=Sing _ _ _ _ 8 box box NOUN NN Number=Sing _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 elk elk VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 286 # text = A second hypersensitive site (HS 2) was identified within the first intron in pre-monocytic cells, which express Elk-1 only when differentiating to monocytes. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 4 site site NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 HS HS NOUN NN Number=Sing _ _ _ _ 7 2 2 X LS _ _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 within within ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 14 intron intron NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 pre-monocytic pre-monocytic ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 express express ADJ JJ Degree=Pos _ _ _ _ 21 Elk elk NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 only only ADV RB _ _ _ _ _ 25 when when ADV WRB PronType=Int _ _ _ _ 26 differentiating differentiat VERB VBG VerbForm=Ger _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 287 # text = In a variety of other cell types, which display a constitutive Elk-1 expression, HS 2 did not exist, suggesting that inducibility of elk-1 expression is associated with the presence of HS 2. Egr-1 and the serum response factor were found to interact specifically with the intronic sequence at +265 and +448, respectively. 1 In in ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 variety variety NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 other other ADJ JJ Degree=Pos _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 which which PRON WDT PronType=Rel _ _ _ _ 10 display display VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 13 Elk elk PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 HS HS PROPN NNP Number=Sing _ _ _ _ 19 2 2 NUM CD NumType=Card _ _ _ _ 20 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 exist exist VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 25 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 26 inducibility inducibility NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 elk elk NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 expression expression NOUN NN Number=Sing _ _ _ _ 32 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 presence presence NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 HS HS PROPN NNP Number=Sing _ _ _ _ 39 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ 41 Egr Egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 -1 -1 NUM CD NumType=Card _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 serum serum NOUN NN Number=Sing _ _ _ _ 46 response response NOUN NN Number=Sing _ _ _ _ 47 factor factor NOUN NN Number=Sing _ _ _ _ 48 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 49 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 50 to to PART TO _ _ _ _ _ 51 interact interact VERB VB VerbForm=Inf _ _ _ _ 52 specifically specifically ADV RB _ _ _ _ _ 53 with with ADP IN _ _ _ _ _ 54 the the DET DT Definite=Def|PronType=Art _ _ _ _ 55 intronic intronic ADJ JJ Degree=Pos _ _ _ _ 56 sequence sequence NOUN NN Number=Sing _ _ _ _ 57 at at ADP IN _ _ _ _ _ 58 + + SYM SYM _ _ _ _ SpaceAfter=No 59 265 265 NUM CD NumType=Card _ _ _ _ 60 and and CCONJ CC _ _ _ _ _ 61 + + SYM SYM _ _ _ _ SpaceAfter=No 62 448 448 NUM CD NumType=Card _ _ _ SpaceAfter=No 63 , , PUNCT , _ _ _ _ _ 64 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 65 . . PUNCT . _ _ _ _ _ # sent_id = 288 # text = Because Egr-1 mRNA and protein levels were observed to increase significantly before induction of elk-1 expression, we propose that Egr-1 is important for the regulation of elk-1 transcription in differentiating monocytes. 1 Because because SCONJ IN _ _ _ _ _ 2 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 -1 -1 NUM CD NumType=Card _ _ _ _ 4 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 levels level NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 increase increase VERB VB VerbForm=Inf _ _ _ _ 12 significantly significantly ADV RB _ _ _ _ _ 13 before before ADP IN _ _ _ _ _ 14 induction induction NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 elk elk NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 22 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 -1 -1 NUM CD NumType=Card _ _ _ _ 26 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 important important ADJ JJ Degree=Pos _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 regulation regulation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 elk elk NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ _ 35 transcription transcription NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 differentiating differentiat ADJ JJ Degree=Pos _ _ _ _ 38 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 289 # text = Document 003002102 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002102 003002102 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 290 # text = Induction of cytokine expression in leukocytes by binding of thrombin-stimulated platelets. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 7 by by SCONJ IN _ _ _ _ _ 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 thrombin- thrombin- SYM NFP _ _ _ _ SpaceAfter=No 11 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 platelets platelet NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 291 # text = BACKGROUND: Activated platelets tether and activate myeloid leukocytes. 1 BACKGROUND background ADP IN _ _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 platelets platelet NOUN NNS Number=Plur _ _ _ _ 5 tether tether NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 activate activate ADJ JJ Degree=Pos _ _ _ _ 8 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 9 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 292 # text = To investigate the potential relevance of this mechanism in acute myocardial infarction (AMI), we examined cytokine induction by leukocyte-platelet adhesion and the occurrence of leukocyte-platelet conjugates in patients with AMI. 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 potential potential ADJ JJ Degree=Pos _ _ _ _ 5 relevance relevance NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 acute acute ADJ JJ Degree=Pos _ _ _ _ 11 myocardial myocardial ADJ JJ Degree=Pos _ _ _ _ 12 infarction infarction NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 AMI Ami PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 18 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 20 induction induction NOUN NN Number=Sing _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 leukocyte leukocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 platelet platelet NOUN NN Number=Sing _ _ _ _ 25 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 occurrence occurrence NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 leukocyte leukocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 platelet platelet NOUN NN Number=Sing _ _ _ _ 33 conjugates conjugate NOUN NNS Number=Plur _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 patients patient NOUN NNS Number=Plur _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 AMI AMI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 293 # text = METHODS AND RESULTS: 1 METHODS method NOUN NNS Number=Plur _ _ _ _ 2 AND and CCONJ CC _ _ _ _ _ 3 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ # sent_id = 294 # text = We obtained peripheral venous blood samples in 20 patients with AMI before and daily for 5 days after direct percutaneous transluminal coronary angioplasty (PTCA) and in 20 patients undergoing elective PTCA. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 obtained obtain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 4 venous venous ADJ JJ Degree=Pos _ _ _ _ 5 blood blood NOUN NN Number=Sing _ _ _ _ 6 samples sample NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 20 20 NUM CD NumType=Card _ _ _ _ 9 patients patient NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 AMI AMI PROPN NNP Number=Sing _ _ _ _ 12 before before ADV RB _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 daily daily ADV RB _ _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 5 5 NUM CD NumType=Card _ _ _ _ 17 days day NOUN NNS Number=Plur _ _ _ _ 18 after after ADP IN _ _ _ _ _ 19 direct direct ADJ JJ Degree=Pos _ _ _ _ 20 percutaneous percutaneous ADJ JJ Degree=Pos _ _ _ _ 21 transluminal transluminal ADJ JJ Degree=Pos _ _ _ _ 22 coronary coronary NOUN NN Number=Sing _ _ _ _ 23 angioplasty angioplasty NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 PTCA PTCA NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 20 20 NUM CD NumType=Card _ _ _ _ 30 patients patient NOUN NNS Number=Plur _ _ _ _ 31 undergoing undergo VERB VBG VerbForm=Ger _ _ _ _ 32 elective elective ADJ JJ Degree=Pos _ _ _ _ 33 PTCA PTCa NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 295 # text = Throughout the study period, CD41 immunofluorescence of leukocytes (flow cytometry) revealed increased leukocyte-platelet adhesion in patients with AMI compared with control patients (mean +/- SE of fluorescence [channels] before PTCA: 77 +/- 16 versus 35 +/- 9; P = .003). 1 Throughout throughout ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 period period NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 CD41 CD41 NUM CD NumType=Card _ _ _ _ 7 immunofluorescence immunofluorescence NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 flow flow NOUN NN Number=Sing _ _ _ _ 12 cytometry cytometry NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 leukocyte leukocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 platelet platelet NOUN NN Number=Sing _ _ _ _ 19 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 patients patient NOUN NNS Number=Plur _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 AMI AMI PROPN NNP Number=Sing _ _ _ _ 24 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 control control NOUN NN Number=Sing _ _ _ _ 27 patients patient NOUN NNS Number=Plur _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 mean mean X GW _ _ _ _ _ 30 +/- +/- X GW _ _ _ _ _ 31 SE se NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 fluorescence fluorescence NOUN NN Number=Sing _ _ _ _ 34 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 channels channel NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 ] ] PUNCT -RRB- _ _ _ _ _ 37 before before ADP IN _ _ _ _ _ 38 PTCA PTCa NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 : : PUNCT : _ _ _ _ _ 40 77 77 NUM CD NumType=Card _ _ _ _ 41 +/- +/- SYM SYM _ _ _ _ _ 42 16 16 NUM CD NumType=Card _ _ _ _ 43 versus versus ADP IN _ _ _ _ _ 44 35 35 NUM CD NumType=Card _ _ _ _ 45 +/- +/- SYM SYM _ _ _ _ _ 46 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 47 ; ; PUNCT , _ _ _ _ _ 48 P p NOUN NN Number=Sing _ _ _ _ 49 = = SYM SYM _ _ _ _ _ 50 .003 .003 NUM CD NumType=Card _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 296 # text = In vitro, thrombin-stimulated fixed platelets bound to neutrophils and monocytes. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 thrombin- thrombin- PUNCT : _ _ _ _ SpaceAfter=No 5 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 fixed fix VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 platelets platelet NOUN NNS Number=Plur _ _ _ _ 8 bound bound ADJ JJ Degree=Pos _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 297 # text = Within 2 hours, this resulted in increased mRNA for interleukin (IL),1 beta, IL-8, and monocyte chemoattractant protein (MCP)-1 in unfractionated leukocytes. 1 Within within ADP IN _ _ _ _ _ 2 2 2 NUM CD NumType=Card _ _ _ _ 3 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 6 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 ,1 ,1 NUM CD NumType=Card _ _ _ _ 16 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 monocyte monocyte ADJ JJ Degree=Pos _ _ _ _ 24 chemoattractant chemoattractant NOUN NN Number=Sing _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 MCP MCP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 unfractionated unfractionated ADJ JJ Degree=Pos _ _ _ _ 33 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 298 # text = After 4 hours, IL-1 beta and IL-8 concentration of the cell-free supernatant had increased by 268 +/- 36% and 210 +/- 7%, respectively, and cellular MCP-1 content had increased by 170 +/- 8%. 1 After after ADP IN _ _ _ _ _ 2 4 4 NUM CD NumType=Card _ _ _ _ 3 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 beta beta NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 8 8 NUM CD NumType=Card _ _ _ _ 13 concentration concentration NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 free free ADJ JJ Degree=Pos _ _ _ _ 19 supernatant supernatant NOUN NN Number=Sing _ _ _ _ 20 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 268 268 NUM CD NumType=Card _ _ _ _ 24 +/- +/- SYM SYM _ _ _ _ _ 25 36 36 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 % % SYM NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 210 210 NUM CD NumType=Card _ _ _ _ 29 +/- +/- SYM SYM _ _ _ _ _ 30 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 37 MCP Mcp NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ _ 40 content content NOUN NN Number=Sing _ _ _ _ 41 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 42 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 by by ADP IN _ _ _ _ _ 44 170 170 NUM CD NumType=Card _ _ _ _ 45 +/- +/- SYM SYM _ _ _ _ _ 46 8% 8% SYM NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 299 # text = Addition of activated platelets to adherent monocytes had a similar effect and was associated with nuclear factor-kappa B activation. 1 Addition Addition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 platelets platelet NOUN NNS Number=Plur _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 adherent adherent ADJ JJ Degree=Pos _ _ _ _ 7 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 8 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 similar similar ADJ JJ Degree=Pos _ _ _ _ 11 effect effect NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 300 # text = Inhibition of binding by anti-P selectin antibodies reduced the effect of activated platelets on cytokine production. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of SCONJ IN _ _ _ _ _ 3 binding bind VERB VBG VerbForm=Ger _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 anti anti X AFX _ _ _ _ SpaceAfter=No 6 -P -p ADJ JJ Degree=Pos _ _ _ _ 7 selectin selectin NOUN NN Number=Sing _ _ _ _ 8 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 9 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 effect effect NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 platelets platelet NOUN NNS Number=Plur _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 17 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 301 # text = CONCLUSIONS: 1 CONCLUSIONS conclusion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 302 # text = In patients with AMI, leukocyte-platelet adhesion is increased. 1 In in ADP IN _ _ _ _ _ 2 patients patient NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 AMI AMI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 leukocyte leukocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 platelet platelet NOUN NN Number=Sing _ _ _ _ 9 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 increased increased VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 303 # text = Binding of activated platelets induces IL-1 beta, IL-8, and MCP-1 in leukocytes. 1 Binding binding NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 platelets platelet NOUN NNS Number=Plur _ _ _ _ 5 induces induce NOUN NNS Number=Plur _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 MCP MCP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 304 # text = Our findings suggest that leukocyte-platelet adhesion contributes to the regulation of inflammatory responses in AMI. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 leukocyte leukocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 platelet platelet NOUN NN Number=Sing _ _ _ _ 8 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 9 contributes contribute NOUN NNS Number=Plur _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 regulation regulation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 15 responses response NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 AMI AMI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 305 # text = Document 003002116 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002116 003002116 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 306 # text = Paternal expression of WT1 in human fibroblasts and lymphocytes. 1 Paternal Paternal ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 WT1 wt1 NUM CD NumType=Card _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 307 # text = The Wilms' tumor suppressor gene ( WT1 ) was previously identified as being imprinted, with frequent maternal expression in human placentae and fetal brains. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Wilms Wilm NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 ' 's PART POS _ _ _ _ _ 4 tumor tumor NOUN NN Number=Sing _ _ _ _ 5 suppressor suppressor NOUN NN Number=Sing _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ _ 8 WT1 wt1 PROPN NNP Number=Sing _ _ _ _ 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 previously previously ADV RB _ _ _ _ _ 12 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 as as SCONJ IN _ _ _ _ _ 14 being be AUX VBG VerbForm=Ger _ _ _ _ 15 imprinted imprinted VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 frequent frequent ADJ JJ Degree=Pos _ _ _ _ 19 maternal maternal ADJ JJ Degree=Pos _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 placentae placenta NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 26 brains brain NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 308 # text = We examined the allele-specific expression of WT1 in cultured human fibroblasts from 15 individuals. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 allele allele NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 specific specific ADJ JJ Degree=Pos _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 WT1 WT1 NUM CD NumType=Card _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 cultured culture ADJ JJ Degree=Pos _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 15 15 NUM CD NumType=Card _ _ _ _ 16 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 309 # text = Seven of 15 fibroblast lines were heterozygous for polymorphic alleles, and the expression patterns were variable, i.e., equal, unequal or monoallelic paternal expression in three, two and two cases, respectively. 1 Seven Seven PROPN NNP Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 15 15 NUM CD NumType=Card _ _ _ _ 4 fibroblast fibroblast ADJ JJ Degree=Pos _ _ _ _ 5 lines line NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 heterozygous heterozygous ADJ JJ Degree=Pos _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 polymorphic polymorphic ADJ JJ Degree=Pos _ _ _ _ 10 alleles allele NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 patterns pattern NOUN NNS Number=Plur _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 variable variable ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 i.e. i.e. X FW _ _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 equal equal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 unequal unequal ADJ JJ Degree=Pos _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 monoallelic monoallelic ADJ JJ Degree=Pos _ _ _ _ 26 paternal paternal ADJ JJ Degree=Pos _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 three three NUM CD NumType=Card _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 two two NUM CD NumType=Card _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 two two NUM CD NumType=Card _ _ _ _ 34 cases case NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 310 # text = Exclusive paternal expression of WT1 was also shown in non-cultured peripheral lymphocytes from the latter two individuals. 1 Exclusive Exclusive ADJ JJ Degree=Pos _ _ _ _ 2 paternal paternal ADJ JJ Degree=Pos _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 WT1 WT1 PROPN NNP Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 non-cultured non-cultured ADJ JJ Degree=Pos _ _ _ _ 11 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 latter latter ADJ JJ Degree=Pos _ _ _ _ 16 two two NUM CD NumType=Card _ _ _ _ 17 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 311 # text = The allele-specific expression profiles of other imprinted genes, IGF2 and H19, on human chromosome 11 were constant and consistent with those in other tissues. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 allele allele NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 profiles profile NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 other other ADJ JJ Degree=Pos _ _ _ _ 9 imprinted imprint VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 IGF2 Igf2 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 H19 h19 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 19 11 11 NUM CD NumType=Card _ _ _ _ 20 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 constant constant ADJ JJ Degree=Pos _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 other other ADJ JJ Degree=Pos _ _ _ _ 28 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 312 # text = Our unexpected observations of paternal or biallelic expression of WT1 in fibroblasts and lymphocytes, together with the previous findings of maternal or biallelic expression in placentae and brains, suggest that the allele-specific regulatory system of WT1 is unique and may be controlled by a putative tissue- and individual-specific modifier. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 unexpected unexpected ADJ JJ Degree=Pos _ _ _ _ 3 observations observation NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 paternal paternal ADJ JJ Degree=Pos _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 biallelic biallelic ADJ JJ Degree=Pos _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 WT1 wt1 NUM CD NumType=Card _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 together together ADV RB _ _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 previous previous ADJ JJ Degree=Pos _ _ _ _ 20 findings finding NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 maternal maternal ADJ JJ Degree=Pos _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 biallelic biallelic ADJ JJ Degree=Pos _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 placentae placenta NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 brains brains NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 suggest suggest VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 32 that that SCONJ IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 allele allele NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 specific specific ADJ JJ Degree=Pos _ _ _ _ 37 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 38 system system NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 WT1 wt1 NUM CD NumType=Card _ _ _ _ 41 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 42 unique unique ADJ JJ Degree=Pos _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 may may AUX MD VerbForm=Fin _ _ _ _ 45 be be AUX VB VerbForm=Inf _ _ _ _ 46 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 47 by by ADP IN _ _ _ _ _ 48 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 49 putative putative ADJ JJ Degree=Pos _ _ _ _ 50 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT , _ _ _ _ _ 52 and and CCONJ CC _ _ _ _ _ 53 individual individual ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 specific specific ADJ JJ Degree=Pos _ _ _ _ 56 modifier modifier NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 313 # text = Document 003002117 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002117 003002117 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 314 # text = Activation of primary human T-lymphocytes through CD2 plus CD28 adhesion molecules induces long-term nuclear expression of NF-kappa B. Stimulation of highly purified human T-cells via CD2 and CD28 adhesion molecules induces and maintains proliferation for more than 3 weeks. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 primary primary ADJ JJ Degree=Pos _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 7 through through ADP IN _ _ _ _ _ 8 CD2 CD2 NUM CD NumType=Card _ _ _ _ 9 plus plus CCONJ CC _ _ _ _ _ 10 CD28 CD28 NUM CD NumType=Card _ _ _ _ 11 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 12 molecules molecule NOUN NNS Number=Plur _ _ _ _ 13 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 term term NOUN NN Number=Sing _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappa kappa PROPN NNP Number=Sing _ _ _ _ 23 B. B. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n 24 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 highly highly ADV RB _ _ _ _ _ 27 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 via via ADP IN _ _ _ _ _ 32 CD2 Cd2 NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 CD28 Cd28 NUM CD NumType=Card _ _ _ _ 35 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 36 molecules molecule NOUN NNS Number=Plur _ _ _ _ 37 induces induce NOUN NNS Number=Plur _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 maintains maintain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 40 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 41 for for ADP IN _ _ _ _ _ 42 more more ADJ JJR Degree=Cmp _ _ _ _ 43 than than ADP IN _ _ _ _ _ 44 3 3 NUM CD NumType=Card _ _ _ _ 45 weeks week NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 315 # text = This potent interleukin 2 (IL-2)-dependent activation does not require monocytes or accessory cells. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 potent potent NOUN NN Number=Sing _ _ _ _ 3 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 4 2 2 NUM CD NumType=Card _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 - - PUNCT : _ _ _ _ SpaceAfter=No 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 require require VERB VB VerbForm=Inf _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 accessory accessory ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 316 # text = Long-lasting IL-2 receptivity is associated with high-level expression of the inducible IL-2 receptor alpha chain (IL-2R alpha) gene that is regulated at both transcriptional and posttranscriptional levels. 1 Long long ADV RB Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 lasting last VERB VBG VerbForm=Ger _ _ _ _ 4 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 receptivity receptivity NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 level level NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 18 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ _ 22 alpha alpha NOUN NN Number=Sing _ _ _ _ 23 chain chain NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2R 2r NOUN NN Number=Sing _ _ _ _ 28 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ _ 31 that that PRON WDT PronType=Rel _ _ _ _ 32 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 34 at at ADP IN _ _ _ _ _ 35 both both CCONJ CC _ _ _ _ _ 36 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 posttranscriptional posttranscriptional ADJ JJ Degree=Pos _ _ _ _ 39 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 317 # text = Increase of IL-2R alpha gene transcription involves the enhanced binding of the transcription factor NF-kappa B to its consensus sequence in the 5'-regulatory region of the IL-2R alpha gene. 1 Increase increase NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2R 2R PROPN NNP Number=Sing _ _ _ _ 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 binding binding NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 23 consensus consensus NOUN NN Number=Sing _ _ _ _ 24 sequence sequence NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 ' ' NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 - - SYM SYM _ _ _ _ SpaceAfter=No 30 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 31 region region NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 2R 2R PROPN NNP Number=Sing _ _ _ _ 37 alpha alpha ADP IN _ _ _ _ _ 38 gene gene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 318 # text = To dissect the molecular basis for the unusually persistent transcription of the IL-2R alpha gene, we analyzed nuclear NF-kappa B binding to a radiolabeled IL-2R alpha kappa B-specific oligonucleotide probe during the time course of CD2 + CD28 activation. 1 To to PART TO _ _ _ _ _ 2 dissect dissect VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 5 basis basis NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 unusually unusually ADJ JJ Degree=Pos _ _ _ _ 9 persistent persistent ADJ JJ Degree=Pos _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2R 2r PROPN NNP Number=Sing _ _ _ _ 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 20 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 22 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ _ 26 binding bind VERB VBG VerbForm=Ger _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 radiolabeled radiolabel VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 2R 2r PROPN NNP Number=Sing _ _ _ _ 33 alpha alpha ADP IN _ _ _ _ _ 34 kappa kappa PROPN NNP Number=Sing _ _ _ _ 35 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 specific specific ADJ JJ Degree=Pos _ _ _ _ 38 oligonucleotide oligonucleotide ADJ JJ Degree=Pos _ _ _ _ 39 probe probe NOUN NN Number=Sing _ _ _ _ 40 during during ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 time time NOUN NN Number=Sing _ _ _ _ 43 course course NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 CD2 CD2 NUM CD NumType=Card _ _ _ _ 46 + + SYM SYM _ _ _ _ _ 47 CD28 CD28 NUM CD NumType=Card _ _ _ _ 48 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 319 # text = Resting T-cell nuclear extracts contained KBF1/p50 homodimer. 1 Resting reste NOUN NN Number=Sing _ _ _ _ 2 T- T- PUNCT : _ _ _ _ SpaceAfter=No 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 extracts extract NOUN NNS Number=Plur _ _ _ _ 6 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 KBF1 KBF1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 p50 p50 NUM CD NumType=Card _ _ _ _ 10 homodimer homodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 320 # text = After stimulation, two new kappa B-specific complexes were identified as NF-kappa B p50-p65 heterodimer and putative c-Rel homodimer or c-Rel-p65 heterodimer. 1 After after ADP IN _ _ _ _ _ 2 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 new new ADJ JJ Degree=Pos _ _ _ _ 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B- B- SYM NFP _ _ _ _ SpaceAfter=No 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 complexes complexe NOUN NNS Number=Plur _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - SYM SYM _ _ _ _ SpaceAfter=No 19 p65 p65 NUM CD NumType=Card _ _ _ _ 20 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 putative putative ADJ JJ Degree=Pos _ _ _ _ 23 c- c- PUNCT , _ _ _ _ SpaceAfter=No 24 Rel Rel ADJ JJ Degree=Pos _ _ _ _ 25 homodimer homodimer NOUN NN Number=Sing _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 p65 p65 NUM CD NumType=Card _ _ _ _ 32 heterodimer heterodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 321 # text = Both inducible complexes persisted for at least 3 weeks. 1 Both both DET DT _ _ _ _ _ 2 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 3 complexes complexe NOUN NNS Number=Plur _ _ _ _ 4 persisted persist VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 at at ADV RB _ _ _ _ _ 7 least least ADV RBS Degree=Sup _ _ _ _ 8 3 3 NUM CD NumType=Card _ _ _ _ 9 weeks week NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 322 # text = Their relative levels were very similar for the duration of proliferation. 1 Their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 2 relative relative ADJ JJ Degree=Pos _ _ _ _ 3 levels level NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 very very ADV RB _ _ _ _ _ 6 similar similar ADJ JJ Degree=Pos _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 duration duration NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 323 # text = In parallel, CD2 + CD28 activation triggered a significant intracellular thiol decrease, suggesting that oxygen radicals are involved in the signaling pathway of adhesion molecules. 1 In in ADP IN _ _ _ _ _ 2 parallel parallel NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 CD2 CD2 NUM CD NumType=Card _ _ _ _ 5 + + SYM SYM _ _ _ _ _ 6 CD28 CD28 NUM CD NumType=Card _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 triggered trigger VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 significant significant ADJ JJ Degree=Pos _ _ _ _ 11 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 12 thiol thiol NOUN NN Number=Sing _ _ _ _ 13 decrease decrease NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 oxygen oxygen ADJ JJ Degree=Pos _ _ _ _ 18 radicals radical NOUN NNS Number=Plur _ _ _ _ 19 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 involved involved ADJ JJ Degree=Pos _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 signaling signal NOUN NN Number=Sing _ _ _ _ 24 pathway pathway NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 27 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 324 # text = Finally, micromolar amounts of pyrrolidine dithiocarbamate, an oxygen radical scavenger that efficiently blocked the nuclear appearance of NF-kappa B in T-lymphocytes, also inhibited IL-2 secretion, IL-2R alpha cell surface expression, and T-cell proliferation. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 micromolar micromolar ADJ JJ Degree=Pos _ _ _ _ 4 amounts amount NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 pyrrolidine pyrrolidine NOUN NN Number=Sing _ _ _ _ 7 dithiocarbamate dithiocarbamate NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 oxygen oxygen ADJ JJ Degree=Pos _ _ _ _ 11 radical radical ADJ JJ Degree=Pos _ _ _ _ 12 scavenger scavenger NOUN NN Number=Sing _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 efficiently efficiently ADV RB _ _ _ _ _ 15 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 appearance appearance NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappa kappa NOUN NN Number=Sing _ _ _ _ 23 B b NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 also also ADV RB _ _ _ _ _ 29 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 2 2 NUM CD NumType=Card _ _ _ _ 33 secretion secretion NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 2R 2R PROPN NNP Number=Sing _ _ _ _ 38 alpha alpha NOUN NN Number=Sing _ _ _ _ 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 surface surface NOUN NN Number=Sing _ _ _ _ 41 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 T- T- SYM NFP _ _ _ _ SpaceAfter=No 45 cell cell NOUN NN Number=Sing _ _ _ _ 46 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 325 # text = Together, these results suggest that NF-kappa B plays an important role in long-term activation of human primary T-lymphocytes via CD2 + CD28. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 important important ADJ JJ Degree=Pos _ _ _ _ 14 role role NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 term term NOUN NN Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 primary primary ADJ JJ Degree=Pos _ _ _ _ 23 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 25 via via ADP IN _ _ _ _ _ 26 CD2 CD2 NUM CD NumType=Card _ _ _ _ 27 + + SYM SYM _ _ _ _ _ 28 CD28 CD28 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 326 # text = Document 003002118 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002118 003002118 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 327 # text = Overproduction of NFKB2 (lyt-10) and c-Rel: a mechanism for HTLV-I Tax-mediated trans-activation via the NF-kappa B signalling pathway. 1 Overproduction Overproduction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NFKB2 NFKB2 NUM CD NumType=Card _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 lyt lyt NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 c class NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 : : PUNCT : _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 20 Tax tax PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 -activation -activation NOUN NN Number=Sing _ _ _ _ 25 via via ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ _ 31 signalling signall VERB VBG VerbForm=Ger _ _ _ _ 32 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 328 # text = Molecular, biochemical and epidemiological evidence implicate HTLV-I as an etiologic agent of adult T cell leukemia (ATL). 1 Molecular Molecular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 epidemiological epidemiological ADJ JJ Degree=Pos _ _ _ _ 6 evidence evidence NOUN NN Number=Sing _ _ _ _ 7 implicate implicate ADJ JJ Degree=Pos _ _ _ _ 8 HTLV Htlv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 etiologic etiologic ADJ JJ Degree=Pos _ _ _ _ 14 agent agent NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 adult adult NOUN NN Number=Sing _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cell cell PROPN NNP Number=Sing _ _ _ _ 19 leukemia leukemia PROPN NNP Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 ATL ATL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 329 # text = The Tax protein of HTLV-I, a positive transcriptional activator of HTLV-I gene expression, is a viral oncogene that also increases transcription of cellular genes including GM-CSF, IL-2R alpha and IL-2. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Tax tax NOUN NN Number=Sing _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 positive positive ADJ JJ Degree=Pos _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 activator activator NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 17 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 viral viral ADJ JJ Degree=Pos _ _ _ _ 23 oncogene oncogene NOUN NN Number=Sing _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 also also ADV RB _ _ _ _ _ 26 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 30 genes gene NOUN NNS Number=Plur _ _ _ _ 31 including include VERB VBG VerbForm=Ger _ _ _ _ 32 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 2R 2R PROPN NNP Number=Sing _ _ _ _ 39 alpha alpha PROPN NNP Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 IL il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 330 # text = One of the cellular targets of the trans-activating effects of Tax is the NF-kappa B/Rel family of transcription factors, pleiotropic regulators of immunoregulatory, cytokine and viral gene expression. 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 5 targets target NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 activating activate VERB VBG VerbForm=Ger _ _ _ _ 11 effects effect NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Tax tax NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 Rel Rel PROPN NNP Number=Sing _ _ _ _ 22 family family NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 pleiotropic pleiotropic ADJ JJ Degree=Pos _ _ _ _ 28 regulators regulator NOUN NNS Number=Plur _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 immunoregulatory immunoregulatory ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 cytokine cytokine ADJ JJ Degree=Pos _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 viral viral ADJ JJ Degree=Pos _ _ _ _ 35 gene gene NOUN NN Number=Sing _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 331 # text = In this report, we demonstrate that NFKB2 (lyt-10) and c-Rel are overexpressed in HTLV-I infected and Tax-expressing cells and, together, account for the majority of the constitutive NF-kappa B binding activity in these cells before and after PMA stimulation. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 NFKB2 Nfkb2 NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 lyt lyt NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 Rel Rel NOUN NN Number=Sing _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 overexpressed overexpress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 24 infected infect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 expressing express VERB VBG VerbForm=Ger _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 together together ADV RB _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 account account VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 majority majority NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 41 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 kappa kappa NOUN NN Number=Sing _ _ _ _ 44 B b NOUN NN Number=Sing _ _ _ _ 45 binding binde VERB VBG VerbForm=Ger _ _ _ _ 46 activity activity NOUN NN Number=Sing _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 49 cells cell NOUN NNS Number=Plur _ _ _ _ 50 before before ADP IN _ _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 after after ADP IN _ _ _ _ _ 53 PMA Pma DET DT Definite=Ind|PronType=Art _ _ _ _ 54 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 332 # text = Most importantly, we show a Tax-dependent correlation between expression of NFKB2(p100) and processing to the DNA binding NFKB2(p52) form, induction of c-Rel, and trans-activation of NF-kappa B-mediated gene expression. 1 Most most ADV RBS _ _ _ _ _ 2 importantly importantly ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 10 correlation correlation NOUN NN Number=Sing _ _ _ _ 11 between between ADP IN _ _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NFKB2 NFKB2 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 p100 p100 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 processing process VERB VBG VerbForm=Ger _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 DNA dna NOUN NN Number=Sing _ _ _ _ 23 binding binding VERB VBG VerbForm=Ger _ _ _ _ 24 NFKB2 NFKB2 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 p52 p52 NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 form form NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 induction induction NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 trans- trans- SYM NFP _ _ _ _ SpaceAfter=No 38 activation activation NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 kappa kappa PROPN NNP Number=Sing _ _ _ _ 43 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 gene gene NOUN NN Number=Sing _ _ _ _ 47 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 333 # text = Furthermore, the NFKB2 precursor is physically associated with c-Rel and with Tax in HTLV-I infected cells. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 NFKB2 Nfkb2 NOUN NN Number=Sing _ _ _ _ 5 precursor precursor NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 physically physically ADV RB _ _ _ _ _ 8 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 c- c- SYM NFP _ _ _ _ SpaceAfter=No 11 Rel Rel PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 Tax tax NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 19 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 334 # text = We propose that NFKB2 synthesis and processing allows continuous nuclear expression of an otherwise cytoplasmic protein and, in conjunction with overexpression of c-Rel, NFKB2 alters the NF-kappa B signalling pathway and contributes to leukemic transformation of T cells by HTLV-I. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 NFKB2 Nfkb2 NUM CD NumType=Card _ _ _ _ 5 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 processing processing VERB VBG VerbForm=Ger _ _ _ _ 8 allows allow NOUN NNS Number=Plur _ _ _ _ 9 continuous continuous ADJ JJ Degree=Pos _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 otherwise otherwise ADV RB _ _ _ _ _ 15 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 conjunction conjunction NOUN NN Number=Sing _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 NFKB2 NFKB2 NUM CD NumType=Card _ _ _ _ 29 alters alter NOUN NNS Number=Plur _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappa kappa NOUN NN Number=Sing _ _ _ _ 34 B b NOUN NN Number=Sing _ _ _ _ 35 signalling signall VERB VBG VerbForm=Ger _ _ _ _ 36 pathway pathway NOUN NN Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 contributes contribute NOUN NNS Number=Plur _ _ _ _ 39 to to ADP IN _ _ _ _ _ 40 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 41 transformation transformation NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 T t PROPN NNP Number=Sing _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ _ 45 by by ADP IN _ _ _ _ _ 46 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT , _ _ _ _ SpaceAfter=No 48 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 335 # text = Document 003002124 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002124 003002124 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 336 # text = Abnormal regulation of the IL-2 promoter in lpr CD4-CD8- T lymphocytes results in constitutive expression of a novel nuclear factor of activated T cells-binding factor. 1 Abnormal abnormal ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 lpr lpr ADJ JJ Degree=Pos _ _ _ _ 11 CD4-CD8 CD4-CD8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ _ 13 T T PROPN NNP Number=Sing _ _ _ _ 14 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 results result NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 novel novel NOUN NN Number=Sing _ _ _ _ 22 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 T t PROPN NNP Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 binding bind VERB VBG VerbForm=Ger _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 337 # text = The inert quality of MRL-Ipr/Ipr (Ipr) peripheral CD4-CD8- (CD4-8-) T cells manifests primarily as an inability to proliferate or produce IL-2 in response to TCR or mitogenic stimulation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inert inert ADJ JJ Degree=Pos _ _ _ _ 3 quality quality NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 MRL MRL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 Ipr Ipr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Ipr Ipr PROPN NNP Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 Ipr Ipr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 14 CD4-CD8 Cd4-cd8 NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 8-) 8-) SYM NFP _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 manifests manifest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 primarily primarily ADV RB _ _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 inability inability NOUN NN Number=Sing _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 proliferate proliferate VERB VB VerbForm=Inf _ _ _ _ 29 or or CCONJ CC _ _ _ _ _ 30 produce produce VERB VB VerbForm=Inf _ _ _ _ 31 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 2 2 NUM CD NumType=Card _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 response response NOUN NN Number=Sing _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 TCR TCR PROPN NNP Number=Sing _ _ _ _ 38 or or CCONJ CC _ _ _ _ _ 39 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 40 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 338 # text = Yet these same cells do initiate early TCR-mediated signaling events, such as generation of inositol phosphates and increased intracellular calcium. 1 Yet yet CCONJ CC _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 same same ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 initiate initiate VERB VB VerbForm=Inf _ _ _ _ 7 early early ADV RB Degree=Pos _ _ _ _ 8 TCR TCR ADV RBR Degree=Cmp _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 signaling signaling NOUN NN Number=Sing _ _ _ _ 12 events event NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 such such ADJ JJ Degree=Pos _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 generation generation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 inositol inositol ADJ JJ Degree=Pos _ _ _ _ 19 phosphates phosphate NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 23 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 339 # text = They also display constitutively high levels of p59fyn and CD3 zeta tyrosine phosphorylation. 1 They they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 display display VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 constitutively constitutively ADV RB _ _ _ _ _ 5 high high ADJ JJ Degree=Pos _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 p5 p5 NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 9fyn 9fyn NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 CD3 CD3 NUM CD NumType=Card _ _ _ _ 12 zeta zeta NOUN NN Number=Sing _ _ _ _ 13 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 14 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 340 # text = The generation of second messengers in T cells normally leads to downstream signaling that results in transcriptional activation of the IL-2 gene. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 generation generation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 5 messengers messenger NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 normally normally ADV RB _ _ _ _ _ 10 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 downstream downstream VERB VB VerbForm=Inf _ _ _ _ 13 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 results result NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 341 # text = We, therefore, compared the activation state of the IL-2 gene promoter region in freshly isolated and stimulated Ipr CD4-8- T cells with that of normal T lymphocytes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 therefore therefore ADV RB _ _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 compared compare VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 state state NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 region region NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 freshly freshly ADV RB _ _ _ _ _ 19 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 Ipr Ipr PROPN NNP Number=Sing _ _ _ _ 23 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 -8 -8 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ _ 26 T t NOUN NN Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 normal normal ADJ JJ Degree=Pos _ _ _ _ 32 T T PROPN NNP Number=Sing _ _ _ _ 33 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 342 # text = Levels of the octamer, NF-kappa B (p50-p65 heterodimer), and AP-1 transcriptional factors are constitutively elevated in freshly isolated Ipr CD4-8- T cells, consistent with the activated phenotype of these cells. 1 Levels level NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B B NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 p65 p65 NUM CD NumType=Card _ _ _ _ 14 heterodimer heterodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ _ 23 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 constitutively constitutively ADV RB _ _ _ _ _ 25 elevated elevate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 freshly freshly ADV RB _ _ _ _ _ 28 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 Ipr Ipr PROPN NNP Number=Sing _ _ _ _ 30 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 -8 -8 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ _ 33 T t NOUN NN Number=Sing _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 343 # text = Upon stimulation with mitogens, formation of the transactivating complex, nuclear factor of activated T cells (NF-AT), occurs with normal kinetics in Ipr CD4-8- T cells. 1 Upon upon ADP IN _ _ _ _ _ 2 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 mitogens mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 formation formation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transactivating transactivating VERB VBG VerbForm=Ger _ _ _ _ 10 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 T T PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 occurs occur NOUN NNS Number=Plur _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 normal normal ADJ JJ Degree=Pos _ _ _ _ 27 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 Ipr Ipr PROPN NNP Number=Sing _ _ _ _ 30 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 -8 -8 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ _ 33 T t NOUN NN Number=Sing _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 344 # text = Yet, the levels of the activating NF-AT complex never reach those observed in similarly stimulated normal T cells. 1 Yet yet CCONJ CC _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 levels level NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 activating activate VERB VBG VerbForm=Ger _ _ _ _ 8 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 AT AT NOUN NN Number=Sing _ _ _ _ 11 complex complex NOUN NN Number=Sing _ _ _ _ 12 never never ADV RB _ _ _ _ _ 13 reach reach VERB VB VerbForm=Inf _ _ _ _ 14 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 15 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 in in ADV RB _ _ _ _ _ 17 similarly similarly ADV RB _ _ _ _ _ 18 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 normal normal ADJ JJ Degree=Pos _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 345 # text = Furthermore, nuclear extracts from Ipr CD4-8- T cells display high levels of a novel specific binding activity at the NF-AT site, which is present at much lower levels in freshly isolated normal T lymphocytes. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 extracts extract NOUN NNS Number=Plur _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 Ipr Ipr PROPN NNP Number=Sing _ _ _ _ 7 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 -8 -8 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - SYM SYM _ _ _ _ _ 10 T t NUM CD NumType=Card _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 display display VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 high high ADJ JJ Degree=Pos _ _ _ _ 14 levels level NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 novel novel NOUN NN Number=Sing _ _ _ _ 18 specific specific ADJ JJ Degree=Pos _ _ _ _ 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 at at ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 AT AT PROPN NNP Number=Sing _ _ _ _ 26 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 which which PRON WDT PronType=Rel _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 present present ADJ JJ Degree=Pos _ _ _ _ 31 at at ADP IN _ _ _ _ _ 32 much much ADV RB _ _ _ _ _ 33 lower lower ADJ JJR Degree=Cmp _ _ _ _ 34 levels level NOUN NNS Number=Plur _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 freshly freshly ADV RB _ _ _ _ _ 37 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 normal normal ADJ JJ Degree=Pos _ _ _ _ 39 T t NOUN NN Number=Sing _ _ _ _ 40 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 346 # text = Upon mitogenic stimulation, the binding activity of the novel NF-AT-binding factor is rapidly down-regulated in normal T cells, but persists at high levels in Ipr CD4-8- T cells. 1 Upon upon ADP IN _ _ _ _ _ 2 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 3 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 novel novel PROPN NNP Number=Sing _ _ _ _ 11 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 AT At NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 binding binding VERB VBG VerbForm=Ger _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 rapidly rapidly ADV RB _ _ _ _ _ 19 down down ADV RB _ _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 normal normal ADJ JJ Degree=Pos _ _ _ _ 24 T T PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 but but CCONJ CC _ _ _ _ _ 28 persists persist NOUN NNS Number=Plur _ _ _ _ 29 at at ADP IN _ _ _ _ _ 30 high high ADJ JJ Degree=Pos _ _ _ _ 31 levels level NOUN NNS Number=Plur _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 Ipr Ipr PROPN NNP Number=Sing _ _ _ _ 34 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 -8 -8 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ _ 37 T t NOUN NN Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 347 # text = These two abnormalities at the NF-AT site provide a potential mechanism to account for the defect in IL-2 production from Ipr CD4-8- T cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 abnormalities abnormality NOUN NNS Number=Plur _ _ _ _ 4 at at ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 AT AT PROPN NNP Number=Sing _ _ _ _ 9 site site NOUN NN Number=Sing _ _ _ _ 10 provide provide VERB VB VerbForm=Inf _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 potential potential ADJ JJ Degree=Pos _ _ _ _ 13 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 account account VERB VB VerbForm=Inf _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 defect defect NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 production production NOUN NN Number=Sing _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 Ipr Ipr PROPN NNP Number=Sing _ _ _ _ 26 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 -8 -8 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ _ 29 T t NOUN NN Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 348 # text = Document 003002127 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002127 003002127 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 349 # text = IL-2-induced growth of CD8+ T cell prolymphocytic leukemia cells mediated by NF-kappaB induction and IL-2 receptor alpha expression. 1 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 growth growth NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 CD8 CD8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 + + SYM SYM _ _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cell cell PROPN NNP Number=Sing _ _ _ _ 12 prolymphocytic prolymphocytic ADJ JJ Degree=Pos _ _ _ _ 13 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 20 induction induction NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 receptor receptor NOUN NN Number=Sing _ _ _ _ 26 alpha alpha NOUN NN Number=Sing _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 350 # text = The binding of interleukin-2 (IL-2) to its receptor on normal T cells induces nuclear expression of nuclear factor kappaB (NF-kappaB), activation of the IL-2 receptor (IL-2R) alpha chain gene, and cell proliferation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 binding binding NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 X LS _ _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 normal normal ADJ JJ Degree=Pos _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 2 2 NUM CD NumType=Card _ _ _ _ 38 receptor receptor NOUN NN Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 2R 2r NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ _ 44 alpha alpha NOUN NN Number=Sing _ _ _ _ 45 chain chain NOUN NN Number=Sing _ _ _ _ 46 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 cell cell NOUN NN Number=Sing _ _ _ _ 50 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 351 # text = In the present study, the role of IL-2R signaling in the growth of CD8+ T cell prolymphocytic leukemia (T-PLL) cells has been investigated. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 X LS _ _ _ _ SpaceAfter=No 12 R be X GW _ _ _ _ _ 13 signaling signal NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 growth growth NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 CD8 CD8 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 + + SYM SYM _ _ _ _ _ 20 T t NUM CD NumType=Card _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 prolymphocytic prolymphocytic ADJ JJ Degree=Pos _ _ _ _ 23 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 T t NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 PLL pLl NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 32 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 352 # text = Flow cytometry revealed that primary leukemia cells from a patient with CD8+ T-PLL expressed IL-2Ralpha and beta chains, and the cells showed a proliferative response and an increase in IL-2Ralpha expression on culture with exogeneous IL-2. 1 Flow flow ADJ JJ Degree=Pos _ _ _ _ 2 cytometry cytometry NOUN NN Number=Sing _ _ _ _ 3 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 primary primary ADJ JJ Degree=Pos _ _ _ _ 6 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 patient patient NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 CD8 CD8 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 + + SYM SYM _ _ _ _ _ 14 T t NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT : _ _ _ _ SpaceAfter=No 16 PLL pLl NOUN NN Number=Sing _ _ _ _ 17 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 Ralpha Ralpha NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 beta beta NOUN NN Number=Sing _ _ _ _ 24 chains chains NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 32 response response NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 increase increase NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 Ralpha Ralpha PROPN NNP Number=Sing _ _ _ _ 41 expression expression NOUN NN Number=Sing _ _ _ _ 42 on on ADP IN _ _ _ _ _ 43 culture culture NOUN NN Number=Sing _ _ _ _ 44 with with ADP IN _ _ _ _ _ 45 exogeneous exogeneous ADJ JJ Degree=Pos _ _ _ _ 46 IL il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 353 # text = Northern blot analysis failed to detect IL-2 mRNA, suggesting that IL-2 may act in a paracrine manner in vivo. 1 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 detect detect VERB VB VerbForm=Inf _ _ _ _ 7 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 may may AUX MD VerbForm=Fin _ _ _ _ 18 act act VERB VB VerbForm=Inf _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 paracrine paracrine NOUN NN Number=Sing _ _ _ _ 22 manner manner NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 vivo. vivo. NOUN NN Number=Sing _ _ _ _ # sent_id = 354 # text = Electrophoretic mobility-shift assays revealed that recombinant IL-2 increased NF-kappaB binding activity in nuclear extracts of the leukemia cells, and Northern blot analysis showed that IL-2 increased the abundance of mRNAs encoding the NF-kappaB components c-Rel and KBF1 in these cells. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assays assay NOUN NNS Number=Plur _ _ _ _ 6 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 extracts extract NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 28 blot blot NOUN NN Number=Sing _ _ _ _ 29 analysis analysis NOUN NN Number=Sing _ _ _ _ 30 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 that that SCONJ IN _ _ _ _ _ 32 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 2 2 NUM CD NumType=Card _ _ _ _ 35 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 abundance abundance NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 mRNAs mRNA SCONJ IN _ _ _ _ _ 40 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 45 components component NOUN NNS Number=Plur _ _ _ _ 46 c- c- SYM NFP _ _ _ _ SpaceAfter=No 47 Rel Rel PROPN NNP Number=Sing _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 KBF1 KBF1 PROPN NNP Number=Sing _ _ _ _ 50 in in ADP IN _ _ _ _ _ 51 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 52 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 355 # text = IL-2 binding analysis demonstrated that IL-2 markedly increased the number of low affinity IL-2Rs on the leukemia cells, without an effect on the number of high-affinity IL-2Rs. 1 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 analysis analysis NOUN NN Number=Sing _ _ _ _ 6 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - SYM SYM _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 markedly markedly ADV RB _ _ _ _ _ 12 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 number number NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 low low ADJ JJ Degree=Pos _ _ _ _ 17 affinity affinity NOUN NN Number=Sing _ _ _ _ 18 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 Rs R NOUN NNS Number=Plur _ _ _ _ 22 on on ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 without without ADP IN _ _ _ _ _ 28 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 effect effect NOUN NN Number=Sing _ _ _ _ 30 on on ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 number number NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 affinity affinity NOUN NN Number=Sing _ _ _ _ 37 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 2Rs 2R PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 356 # text = These results show that IL-2 is capable of inducing the nuclear expression of NF-kappaB in primary CD8+ T-PLL cells, and that this effect is mediated, at least in part, at a pretranslational level. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 capable capable ADJ JJ Degree=Pos _ _ _ _ 10 of of SCONJ IN _ _ _ _ _ 11 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 primary primary ADJ JJ Degree=Pos _ _ _ _ 21 CD8 CD8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 + + SYM SYM _ _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 PLL pLl PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 that that SCONJ IN _ _ _ _ _ 30 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 31 effect effect NOUN NN Number=Sing _ _ _ _ 32 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 at at ADV RB _ _ _ _ _ 36 least least ADV RBS Degree=Sup _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 part part NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 at at ADP IN _ _ _ _ _ 41 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 pretranslational pretranslational ADJ JJ Degree=Pos _ _ _ _ 43 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 357 # text = Document 003002129 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002129 003002129 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 358 # text = Impaired fetal thymocyte development after efficient adenovirus-mediated inhibition of NF-kappa B activation. 1 Impaired Impaire ADJ JJ Degree=Pos _ _ _ _ 2 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 3 thymocyte thymocyte NOUN NN Number=Sing _ _ _ _ 4 development development NOUN NN Number=Sing _ _ _ _ 5 after after ADP IN _ _ _ _ _ 6 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 7 adenovirus adenovirus NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 -mediated -mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 359 # text = We introduce a new experimental system combining adenovirus-mediated gene transfer and fetal thymic organ culture (FTOC). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 introduce introduce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 new new ADJ JJ Degree=Pos _ _ _ _ 5 experimental experimental ADJ JJ Degree=Pos _ _ _ _ 6 system system NOUN NN Number=Sing _ _ _ _ 7 combining combi VERB VBG VerbForm=Ger _ _ _ _ 8 adenovirus adenovirus ADP IN _ _ _ _ SpaceAfter=No 9 -mediated -mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 transfer transfer NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 14 thymic thymic ADJ JJ Degree=Pos _ _ _ _ 15 organ organ ADJ JJ Degree=Pos _ _ _ _ 16 culture culture NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 FTOC FTOC NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 360 # text = This system allowed us to efficiently express in developing thymocytes a mutant form of the NF-kappa B inhibitor 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 system system NOUN NN Number=Sing _ _ _ _ 3 allowed allow VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 us we PRON PRP Case=Acc|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 efficiently efficiently ADV RB _ _ _ _ _ 7 express express VERB VB VerbForm=Inf _ _ _ _ 8 in in SCONJ IN _ _ _ _ _ 9 developing develop VERB VBG VerbForm=Ger _ _ _ _ 10 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 13 form form NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ _ 20 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ # sent_id = 361 # text = I kappa B alpha (mut-I kappa B) and to study the maturation defects occurring when NF-kappa B activation is inhibited during fetal development. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa X FW Foreign=Yes _ _ _ _ 3 B b ADJ JJ Degree=Pos _ _ _ _ 4 alpha alpha NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 mut mut NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT : _ _ _ _ SpaceAfter=No 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 study study VERB VB VerbForm=Inf _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 maturation maturation NOUN NN Number=Sing _ _ _ _ 17 defects defect NOUN NNS Number=Plur _ _ _ _ 18 occurring occurre VERB VBG VerbForm=Ger _ _ _ _ 19 when when ADV WRB PronType=Int _ _ _ _ 20 NF NF ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappa kappa NOUN NN Number=Sing _ _ _ _ 23 B b NOUN NN Number=Sing _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 during during ADP IN _ _ _ _ _ 28 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 29 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 362 # text = Fetal thymocytes infected with adenovirus containing mut-I kappa B were found to develop normally until the CD44-CD25+, CD4-CD8- double-negative stage, while production of more mature double-positive and single-positive populations was strongly decreased. 1 Fetal Fetal ADJ JJ Degree=Pos _ _ _ _ 2 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 3 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 adenovirus adenovirus NOUN NN Number=Sing _ _ _ _ 6 containing containing VERB VBG VerbForm=Ger _ _ _ _ 7 mut mut NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B b PROPN NNP Number=Sing _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 develop develop VERB VB VerbForm=Inf _ _ _ _ 16 normally normally ADV RB _ _ _ _ _ 17 until until ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 CD44-CD25+ Cd44-cd25+ NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 CD4-CD8 Cd4-cd8 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ _ 23 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 negative negative ADJ JJ Degree=Pos _ _ _ _ 26 stage stage NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 while while SCONJ IN _ _ _ _ _ 29 production production NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 more more ADJ JJR Degree=Cmp _ _ _ _ 32 mature mature ADJ JJ Degree=Pos _ _ _ _ 33 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 positive positive ADJ JJ Degree=Pos _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 single single ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 positive positive ADJ JJ Degree=Pos _ _ _ _ 40 populations population NOUN NNS Number=Plur _ _ _ _ 41 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 42 strongly strongly ADV RB _ _ _ _ _ 43 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 363 # text = Proliferation, as measured by the percentage of cells in cycle appeared normal, as did rearrangement and expression of the TCR beta-chain. 1 Proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 as as SCONJ IN _ _ _ _ _ 4 measured measure VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 percentage percentage NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 cycle cycle NOUN NN Number=Sing _ _ _ _ 12 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 normal normal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 as as SCONJ IN _ _ _ _ _ 16 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 rearrangement rearrangement NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 TCR TCR PROPN NNP Number=Sing _ _ _ _ 23 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 chain chain NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 364 # text = However, apoptosis was much higher in FTOC infected with adenovirus containing mut-I kappa B than in FTOC infected with a control virus. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 much much ADV RB _ _ _ _ _ 6 higher higher ADJ JJR Degree=Cmp _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 FTOC FTOC PROPN NNP Number=Sing _ _ _ _ 9 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 adenovirus adenovirus NOUN NN Number=Sing _ _ _ _ 12 containing containing VERB VBG VerbForm=Ger _ _ _ _ 13 mut mut NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 kappa kappa PROPN NNP Number=Sing _ _ _ _ 17 B b PROPN NNP Number=Sing _ _ _ _ 18 than than ADP IN _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 FTOC FTOC PROPN NNP Number=Sing _ _ _ _ 21 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 control control NOUN NN Number=Sing _ _ _ _ 25 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 365 # text = Taken together, these results suggest that NF-kappa B plays a crucial role in ensuring the differentiation and survival of thymocytes in the early stages of their development. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 15 role role NOUN NN Number=Sing _ _ _ _ 16 in in SCONJ IN _ _ _ _ _ 17 ensuring ensure VERB VBG VerbForm=Ger _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 survival survival NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 early early ADJ JJ Degree=Pos _ _ _ _ 27 stages stage NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 30 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 366 # text = Document 003002140 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002140 003002140 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 367 # text = Positive and negative regulation of granulocyte-macrophage colony-stimulating factor promoter activity by AML1-related transcription factor, PEBP2. 1 Positive positive ADJ JJ Degree=Pos _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 negative negative ADJ JJ Degree=Pos _ _ _ _ 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 9 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 AML1 AML1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 related related ADJ JJ Degree=Pos _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 PEBP2 Pebp2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 368 # text = The granulocyte-macrophage colony-stimulating factor (GM-CSF) gene promoter contains a consensus sequence for the polyomavirus enhancer binding-protein 2 (PEBP2) transcription factor, which consists of alpha and beta subunits. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 5 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 stimulating stimulating NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 gene gene ADJ JJ Degree=Pos _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 consensus consensus NOUN NN Number=Sing _ _ _ _ 19 sequence sequence NOUN NN Number=Sing _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 polyomavirus polyomavirus NOUN NN Number=Sing _ _ _ _ 23 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 24 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 25 - - PUNCT : _ _ _ _ SpaceAfter=No 26 protein protein NOUN NN Number=Sing _ _ _ _ 27 2 2 NUM CD NumType=Card _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 PEBP2 PEBP2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ _ 32 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 which which PRON WDT PronType=Rel _ _ _ _ 35 consists consist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 alpha alpha NOUN NN Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 beta beta NOUN NN Number=Sing _ _ _ _ 40 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 369 # text = There are at least two genes, alpha 1 There there PRON EX _ _ _ _ _ 2 are be VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 at at ADV RB _ _ _ _ _ 4 least least ADV RBS Degree=Sup _ _ _ _ 5 two two NUM CD NumType=Card _ _ _ _ 6 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 alpha alpha NOUN NN Number=Sing _ _ _ _ # sent_id = 370 # text = A and alpha B, encoding the alpha subunit. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 alpha alpha NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 alpha alpha NOUN NN Number=Sing _ _ _ _ 9 subunit subunit NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 371 # text = alpha 1 alpha alpha NOUN NN Number=Sing _ _ _ _ # sent_id = 372 # text = B is the mouse homologue of human AML1 gene detected at the breakpoints of t(8;21) and t(3;21) myeloid leukemias. 1 B b NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mouse mouse NOUN NN Number=Sing _ _ _ _ 5 homologue homologue NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 AML1 AML1 NOUN NN Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 detected detect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 at at ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 breakpoints breakpoint NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 t t NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 8;21 8;21 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 t t NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 3;21 3;21 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 myeloid myeloid VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 leukemias leukemia NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 373 # text = We examined alpha A1 (an alpha 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 alpha alpha ADP IN _ _ _ _ _ 4 A1 A1 PROPN NNP Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 alpha alpha NOUN NN Number=Sing _ _ _ _ # sent_id = 374 # text = A-gene product) and alpha B1 and alpha B2 (two alpha B-encoded isomers) for their effects on the GM-CSF promoter. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 gene gene NOUN NN Number=Sing _ _ _ _ 4 product product NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 alpha alpha PROPN NNP Number=Sing _ _ _ _ 8 B1 B1 PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 alpha alpha ADP IN _ _ _ _ _ 11 B2 b2 NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 two two NUM CD NumType=Card _ _ _ _ 14 alpha alpha NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 isomers isomer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 22 effects effect NOUN NNS Number=Plur _ _ _ _ 23 on on ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 CSF CSF PROPN NNP Number=Sing _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 375 # text = PEBP2 alpha A1, alpha B1, and alpha B2 proteins bound the PEBP2 site within the mouse GM-CSF promoter. 1 PEBP2 PEBP2 NOUN NN Number=Sing _ _ _ _ 2 alpha alpha ADP IN _ _ _ _ _ 3 A1 A1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 alpha alpha ADP IN _ _ _ _ _ 6 B1 B1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 alpha alpha ADP IN _ _ _ _ _ 10 B2 B2 NOUN NN Number=Sing _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 bound bound VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 PEBP2 Pebp2 NUM CD NumType=Card _ _ _ _ 15 site site NOUN NN Number=Sing _ _ _ _ 16 within within ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 mouse mouse NOUN NN Number=Sing _ _ _ _ 19 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 CSF CSF PROPN NNP Number=Sing _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 376 # text = PEBP2 alpha A1 and alpha B1 enhanced the expression of the GM-CSF promoter-driven reporter plasmid in unstimulated and 12-O-tetradecanoylphorbol 13-acetate/phytohemagglutinin-stimulated human Jurkat T cells. 1 PEBP2 PEBP2 NOUN NN Number=Sing _ _ _ _ 2 alpha alpha ADP IN _ _ _ _ _ 3 A1 A1 PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 alpha alpha PROPN NNP Number=Sing _ _ _ _ 6 B1 B1 PROPN NNP Number=Sing _ _ _ _ 7 enhanced enhance VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 CSF CSF PROPN NNP Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 reporter reporter NOUN NN Number=Sing _ _ _ _ 19 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 O of ADP IN Abbr=Yes _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 tetradecanoylphorbol tetradecanoylphorbol NOUN NN Number=Sing _ _ _ _ 28 13-acetate/phytohemagglutinin-stimulated 13-acetate/phytohemagglutinin-stimulated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 31 T T PROPN NNP Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 377 # text = In contrast, the promoter activity was suppressed by alpha B2. Coexpression of alpha B1 and alpha B2 showed that the promoter activity could be determined by the alpha B1/alpha B2 ratio. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 promoter promoter ADJ JJ Degree=Pos _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 B2 B2 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ 13 Coexpression Coexpression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 alpha alpha NOUN NN Number=Sing _ _ _ _ 16 B1 b1 NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 alpha alpha NOUN NN Number=Sing _ _ _ _ 19 B2 B2 NOUN NN Number=Sing _ _ _ _ 20 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ _ 25 could could AUX MD VerbForm=Fin _ _ _ _ 26 be be AUX VB VerbForm=Inf _ _ _ _ 27 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 alpha alpha NOUN NN Number=Sing _ _ _ _ 31 B1 B1 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 / / PUNCT , _ _ _ _ SpaceAfter=No 33 alpha alpha NOUN NN Number=Sing _ _ _ _ 34 B2 B2 NUM CD NumType=Card _ _ _ _ 35 ratio ratio NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 378 # text = Jurkat cell extract contained PEBP2 site-binding protein(s) that cross-reacted with antimouse alpha A1 antibodies. 1 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 extract extract NOUN NN Number=Sing _ _ _ _ 4 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 PEBP2 PEBP2 NUM CD NumType=Card _ _ _ _ 6 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 s s X AFX _ _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 cross-reacted cross-reacted VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 antimouse antimouse NOUN NN Number=Sing _ _ _ _ 17 alpha alpha NOUN NN Number=Sing _ _ _ _ 18 A1 A1 NUM CD NumType=Card _ _ _ _ 19 antibodies antibody NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 379 # text = Northern blot analysis indicated the expression of human PEBP2 alpha 1 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 PEBP2 Pebp2 NOUN NN Number=Sing _ _ _ _ 10 alpha alpha NOUN NN Number=Sing _ _ _ _ # sent_id = 380 # text = A, alpha B (AML1), and beta genes in Jurkat cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 alpha alpha NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 AML1 Aml1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 beta beta NOUN NN Number=Sing _ _ _ _ 11 genes gene NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 381 # text = Although further studies are required to determine the precise role of PEBP2 in the GM-CSF promoter activity, the present findings suggested the importance of the relative ratio of different PEBP2 isoforms in regulating the levels of the promoter activity. 1 Although although SCONJ IN _ _ _ _ _ 2 further further ADJ JJ Degree=Pos _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 determine determine VERB VB VerbForm=Inf _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 precise precise ADJ JJ Degree=Pos _ _ _ _ 10 role role NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 PEBP2 Pebp2 NUM CD NumType=Card _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 CSF CSF PROPN NNP Number=Sing _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 present present ADJ JJ Degree=Pos _ _ _ _ 23 findings finding NOUN NNS Number=Plur _ _ _ _ 24 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 importance importance NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 relative relative ADJ JJ Degree=Pos _ _ _ _ 30 ratio ratio NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 different different ADJ JJ Degree=Pos _ _ _ _ 33 PEBP2 PEBP2 NUM CD NumType=Card _ _ _ _ 34 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 35 in in SCONJ IN _ _ _ _ _ 36 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 levels level NOUN NNS Number=Plur _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 promoter promoter ADJ JJ Degree=Pos _ _ _ _ 42 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 382 # text = Document 003002141 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002141 003002141 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 383 # text = Transcriptional regulation of lysosomal acid lipase in differentiating monocytes is mediated by transcription factors Sp1 and AP-2. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 lysosomal lysosomal ADJ JJ Degree=Pos _ _ _ _ 5 acid acid ADJ JJ Degree=Pos _ _ _ _ 6 lipase lipase NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 differentiating differentiating NOUN NN Number=Sing _ _ _ _ 9 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factors factor NOUN NNS Number=Plur _ _ _ _ 15 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 384 # text = Human lysosomal acid lipase (LAL) is a hydrolase required for the cleavage of cholesteryl esters and triglycerides derived from plasma lipoproteins. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 lysosomal lysosomal ADJ JJ Degree=Pos _ _ _ _ 3 acid acid NOUN NN Number=Sing _ _ _ _ 4 lipase lipase NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 LAL LAL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 hydrolase hydrolase NOUN NN Number=Sing _ _ _ _ 11 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 cleavage cleavage NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 cholesteryl cholesteryl ADJ JJ Degree=Pos _ _ _ _ 17 esters ester NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 triglycerides triglyceride NOUN NNS Number=Plur _ _ _ _ 20 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 plasma plasma NOUN NN Number=Sing _ _ _ _ 23 lipoproteins lipoprotein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 385 # text = It is shown here that during monocyte to macrophage differentiation, the expression of LAL-mRNA is induced. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 here here ADV RB PronType=Dem _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 during during ADP IN _ _ _ _ _ 7 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 10 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 LAL LAL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 386 # text = This induction is dependent on protein kinase C activity and protein synthesis. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 C C NOUN NN Number=Sing _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 387 # text = The cell type-specific increase in LAL expression is further investigated in the THP-1 cell line with respect to transcriptional regulation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 increase increase NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 LAL Lal ADJ JJ Degree=Pos _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 further further ADV RB _ _ _ _ _ 12 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 line line NOUN NN Number=Sing _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 respect respect NOUN NN Number=Sing _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 24 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 388 # text = The human monocytic leukemia cell line THP-1 differentiates into macrophage-like cells when treated with phorbol esters. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 4 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 line line NOUN NN Number=Sing _ _ _ _ 7 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 differentiates differentiate NOUN NNS Number=Plur _ _ _ _ 11 into into ADP IN _ _ _ _ _ 12 macrophage macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 like like ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 when when ADV WRB PronType=Int _ _ _ _ 17 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 20 esters ester NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 389 # text = In order to determine the cis-acting elements necessary for both basal and phorbol 12-myristate-13 acetate (PMA)-enhanced promoter activity, we performed deletion analysis and reporter gene assays. 1 In in ADP IN _ _ _ _ _ 2 order order NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 determine determine VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 -acting -act VERB VBG VerbForm=Ger _ _ _ _ 8 elements element NOUN NNS Number=Plur _ _ _ _ 9 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 both both CCONJ CC _ _ _ _ _ 12 basal basal ADJ JJ Degree=Pos _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 15 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 myristate myristate NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 -13 -13 NUM CD NumType=Card _ _ _ _ 19 acetate acetate NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ _ 26 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 29 performed perform VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 deletion deletion NOUN NN Number=Sing _ _ _ _ 31 analysis analysis NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 reporter reporter NOUN NN Number=Sing _ _ _ _ 34 gene gene NOUN NN Number=Sing _ _ _ _ 35 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 390 # text = A PMA responsive element has been identified between -182 bp and -107 bp upstream of the major transcription start site. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 PMA PMA PROPN NNP Number=Sing _ _ _ _ 3 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 4 element element NOUN NN Number=Sing _ _ _ _ 5 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 7 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 between between ADP IN _ _ _ _ _ 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 182 182 NUM CD NumType=Card _ _ _ _ 11 bp bp NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 107 107 NUM CD NumType=Card _ _ _ _ 15 bp bp NOUN NN Number=Sing _ _ _ _ 16 upstream upstream NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 major major ADJ JJ Degree=Pos _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 start start NOUN NN Number=Sing _ _ _ _ 22 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 391 # text = Gel mobility shift assays demonstrated that binding of Sp1 and AP-2 to the LAL promoter is increased by PMA in THP-1 cells. 1 Gel gel NOUN NN Number=Sing _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assays assays NOUN NNS Number=Plur _ _ _ _ 5 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 LAL Lal ADJ JJ Degree=Pos _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 PMA PMA PROPN NNP Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 THP THP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 392 # text = Co-transfections with expression plasmids for Sp1 and AP-2 further emphasized the important role of these transcription factors in both basal and PMA-enhanced LAL expression. 1 Co co ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 -transfections -transfection NOUN NNS Number=Plur _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 further further ADV RB _ _ _ _ _ 13 emphasized emphasize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 important important ADJ JJ Degree=Pos _ _ _ _ 16 role role NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 factors factor NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 both both CCONJ CC _ _ _ _ _ 23 basal basal ADJ JJ Degree=Pos _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 PMA Pma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 LAL Lal ADJ JJ Degree=Pos _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 393 # text = Our data suggest that differentiation dependent increase of lysosomal acid lipase (LAL) expression in THP-1 cells is mediated by a concerted action of Sp1 and AP-2. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 6 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 7 increase increase NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 lysosomal lysosomal ADJ JJ Degree=Pos _ _ _ _ 10 acid acid ADJ JJ Degree=Pos _ _ _ _ 11 lipase lipase NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 LAL LAL INTJ UH _ _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 THP THP NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 concerted concert ADJ JJ Degree=Pos _ _ _ _ 26 action action NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 Sp1 sp1 NUM CD NumType=Card _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 394 # text = Document 003002142 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002142 003002142 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 395 # text = NF-kappaB regulates Fas/APO-1/CD95- and TCR- mediated apoptosis of T lymphocytes. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 Fas/APO-1/CD95- Fas/APO-1/CD95- NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 TCR Tcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ _ 9 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 396 # text = The maintenance of lymphocyte homeostasis by apoptosis is a critical regulatory mechanism in the normal immune system. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 maintenance maintenance NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 5 homeostasis homeostasis NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 critical critical ADJ JJ Degree=Pos _ _ _ _ 11 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 12 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 normal normal ADJ JJ Degree=Pos _ _ _ _ 16 immune immune ADJ JJ Degree=Pos _ _ _ _ 17 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 397 # text = The transcription factor NF-kappaB has been shown to play a role in protecting cells against death mediated by TNF 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 9 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 play play VERB VB VerbForm=Inf _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 role role NOUN NN Number=Sing _ _ _ _ 14 in in SCONJ IN _ _ _ _ _ 15 protecting protect VERB VBG VerbForm=Ger _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 against against ADP IN _ _ _ _ _ 18 death death NOUN NN Number=Sing _ _ _ _ 19 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 TNF TNF PROPN NNP Number=Sing _ _ _ _ # sent_id = 398 # text = We show here that NF-kappaB also has a role in regulating Fas/APO-1/CD95-mediated death, a major pathway of peripheral T cell death. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 also also ADV RB _ _ _ _ _ 9 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 in in SCONJ IN _ _ _ _ _ 13 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 14 Fas/APO-1/CD95-mediated Fas/APO-1/CD95-mediated ADJ JJ Degree=Pos _ _ _ _ 15 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 major major ADJ JJ Degree=Pos _ _ _ _ 19 pathway pathway NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 22 T T PROPN NNP Number=Sing _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 399 # text = Transfection of Jurkat cells with the NF-kappaB subunits p50 and p65 confers resistance against Fas-mediated apoptosis. 1 Transfection Transfection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 subunits subunit NOUN NNS Number=Plur _ _ _ _ 11 p50 p50 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 p65 p65 NUM CD NumType=Card _ _ _ _ 14 confers confer NOUN NNS Number=Plur _ _ _ _ 15 resistance resistance NOUN NN Number=Sing _ _ _ _ 16 against against ADP IN _ _ _ _ _ 17 Fas- Fas- PUNCT : _ _ _ _ SpaceAfter=No 18 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 400 # text = Reciprocally, inhibition of NF-kappaB activation by a soluble peptide inhibitor or a dominant form of the NF-kappaB inhibitor, IkappaB, makes the cells more susceptible to Fas-mediated apoptosis. 1 Reciprocally Reciprocally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 12 peptide peptide NOUN NN Number=Sing _ _ _ _ 13 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 17 form form NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 23 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 IkappaB Ikappab PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 makes make VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 more more ADV RBR _ _ _ _ _ 31 susceptible susceptible ADJ JJ Degree=Pos _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 Fas- Fas- SYM SYM _ _ _ _ SpaceAfter=No 34 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 401 # text = Furthermore, inhibition of NF-kappaB activation by a soluble peptide inhibitor rendered a T cell hybridoma more susceptible to TCR-mediated apoptosis. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 12 peptide peptide NOUN NN Number=Sing _ _ _ _ 13 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 14 rendered render VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 hybridoma hybridoma NOUN NN Number=Sing _ _ _ _ 19 more more ADV RBR _ _ _ _ _ 20 susceptible susceptible ADJ JJ Degree=Pos _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 402 # text = Correspondingly, transfection of p50 and p65 provided considerable protection from TCR-mediated apoptosis. 1 Correspondingly Correspondingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 transfection transfection NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 p50 p50 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 p65 p65 NUM CD NumType=Card _ _ _ _ 8 provided provide VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 considerable considerable ADJ JJ Degree=Pos _ _ _ _ 10 protection protection NOUN NN Number=Sing _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 403 # text = These observations were corroborated by studies on Fas-mediated death in primary T cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 corroborated corroborate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 studies study NOUN NNS Number=Plur _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 Fas- Fas- SYM SYM _ _ _ _ SpaceAfter=No 9 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 death death NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 primary primary ADJ JJ Degree=Pos _ _ _ _ 13 T T PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 404 # text = Concanavalin 1 Concanavalin Concanavalin PROPN NNP Number=Sing _ _ _ _ # sent_id = 405 # text = A-activated cycling T cell blasts from mice that are transgenic for the dominant IkappaB molecule have increased sensitivity to Fas-mediated apoptosis, associated with a down-regulation of NF-kappaB complexes in the nucleus. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 cycling cycling NOUN NN Number=Sing _ _ _ _ 5 T t NUM CD NumType=Card _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 blasts blast NOUN NNS Number=Plur _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 mice mouse NOUN NNS Number=Plur _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 16 IkappaB IkappaB NOUN NN Number=Sing _ _ _ _ 17 molecule molecule NOUN NN Number=Sing _ _ _ _ 18 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 Fas- Fas- SYM NFP _ _ _ _ SpaceAfter=No 23 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 down down NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 regulation regulation NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 36 complexes complex NOUN NNS Number=Plur _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 406 # text = In addition, blocking TNF, itself a positive regulator of NF-kappaB, with neutralizing antibodies renders the cells more susceptible to anti-Fas-mediated apoptosis. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 blocking block VERB VBG VerbForm=Ger _ _ _ _ 5 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 itself itself PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs|Reflex=Yes _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 positive positive ADJ JJ Degree=Pos _ _ _ _ 10 regulator regulator NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 with with SCONJ IN _ _ _ _ _ 17 neutralizing neutralize VERB VBG VerbForm=Ger _ _ _ _ 18 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 19 renders render NOUN NNS Number=Plur _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 more more ADV RBR _ _ _ _ _ 23 susceptible susceptible ADJ JJ Degree=Pos _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 anti anti X AFX _ _ _ _ SpaceAfter=No 26 -Fas- -Fas- SYM SYM _ _ _ _ SpaceAfter=No 27 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 407 # text = In summary, our results provide compelling evidence that NF-kappaB protects against Fas-mediated death and is likely to be an important regulator of T cell homeostasis and tolerance. 1 In in ADP IN _ _ _ _ _ 2 summary summary NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 compelling compelling ADJ JJ Degree=Pos _ _ _ _ 8 evidence evidence NOUN NN Number=Sing _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 protects protect NOUN NNS Number=Plur _ _ _ _ 14 against against ADP IN _ _ _ _ _ 15 Fas- Fas- SYM SYM _ _ _ _ SpaceAfter=No 16 mediated mediated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 death death NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 likely likely ADJ JJ Degree=Pos _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 important important ADJ JJ Degree=Pos _ _ _ _ 25 regulator regulator NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 T t PROPN NNP Number=Sing _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 homeostasis homeostasis NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 tolerance tolerance NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 408 # text = Document 003002145 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002145 003002145 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 409 # text = An IL-2 response element in the human IL-2 receptor alpha chain promoter is a composite element that binds Stat5, Elf-1, HMG-I(Y) and a GATA family protein. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 response response NOUN NN Number=Sing _ _ _ _ 6 element element NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ _ 14 alpha alpha NOUN NN Number=Sing _ _ _ _ 15 chain chain NOUN NN Number=Sing _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 composite composite ADJ JJ Degree=Pos _ _ _ _ 20 element element NOUN NN Number=Sing _ _ _ _ 21 that that PRON WDT PronType=Rel _ _ _ _ 22 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 Stat5 Stat5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 HMG Hmg INTJ UH _ _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 Y y X FW Foreign=Yes _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 GATA GATa PROPN NNP Number=Sing _ _ _ _ 37 family family NOUN NN Number=Sing _ _ _ _ 38 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 410 # text = Expression of the human interleukin-2 (IL-2) receptor alpha chain gene is potently upregulated by its own ligand, IL-2. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ _ 14 alpha alpha NOUN NN Number=Sing _ _ _ _ 15 chain chain NOUN NN Number=Sing _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 potently potently ADV RB _ _ _ _ _ 19 upregulated upregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 22 own own ADJ JJ Degree=Pos _ _ _ _ 23 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 411 # text = In this study, we characterize an essential upstream IL-2 response element that contains both consensus and non-consensus GAS motifs, two putative Ets binding sites (EBS), one of which overlaps the consensus GAS motif, and a GATA motif, which overlaps the non-consensus GAS motif. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 characterize characterize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 essential essential ADJ JJ Degree=Pos _ _ _ _ 9 upstream upstream NOUN NN Number=Sing _ _ _ _ 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 response response NOUN NN Number=Sing _ _ _ _ 14 element element NOUN NN Number=Sing _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 both both CCONJ CC _ _ _ _ _ 18 consensus consensus NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 non-consensus non-consensus ADJ JJ Degree=Pos _ _ _ _ 21 GAS gas NOUN NNS Number=Plur _ _ _ _ 22 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 two two NUM CD NumType=Card _ _ _ _ 25 putative putative ADJ JJ Degree=Pos _ _ _ _ 26 Ets Et NOUN NNS Number=Plur _ _ _ _ 27 binding bind VERB VBG VerbForm=Ger _ _ _ _ 28 sites site NOUN NNS Number=Plur _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 EBS EBS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 one one NUM CD NumType=Card _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 which which PRON WDT PronType=Rel _ _ _ _ 36 overlaps overlaps VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 consensus consensus NOUN NN Number=Sing _ _ _ _ 39 GAS gas NOUN NN Number=Sing _ _ _ _ 40 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 44 GATA GATa PROPN NNP Number=Sing _ _ _ _ 45 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 which which PRON WDT PronType=Rel _ _ _ _ 48 overlaps overlaps VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 non-consensus non-consensus ADJ JJ Degree=Pos _ _ _ _ 51 GAS gas NOUN NN Number=Sing _ _ _ _ 52 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 412 # text = We demonstrate that although the individual components of this element do not respond to IL-2, together they form a composite element capable of conferring IL-2 responsiveness to a heterologous promoter. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 although although SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 individual individual ADJ JJ Degree=Pos _ _ _ _ 7 components component NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 10 element element NOUN NN Number=Sing _ _ _ _ 11 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 respond respond VERB VB VerbForm=Inf _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 together together SCONJ IN _ _ _ _ _ 20 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 21 form form VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 composite composite NOUN NN Number=Sing _ _ _ _ 24 element element NOUN NN Number=Sing _ _ _ _ 25 capable capable ADJ JJ Degree=Pos _ _ _ _ 26 of of SCONJ IN _ _ _ _ _ 27 conferring conferr VERB VBG VerbForm=Ger _ _ _ _ 28 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 2 2 NUM CD NumType=Card _ _ _ _ 31 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 35 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 413 # text = Multiple factors including Stat5, Elf-1, HMG-I(Y) and GATA family proteins bind to the IL-2 response element and mutation of any one of these binding sites diminishes the activity of this element. 1 Multiple multiple ADJ JJ Degree=Pos _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 including include VERB VBG VerbForm=Ger _ _ _ _ 4 Stat5 Stat5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 HMG Hmg INTJ UH _ _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 Y y PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 GATA GATA PROPN NNP Number=Sing _ _ _ _ 17 family family NOUN NN Number=Sing _ _ _ _ 18 proteins protein NOUN NNS Number=Plur _ _ _ _ 19 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 response response NOUN NN Number=Sing _ _ _ _ 26 element element NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 mutation mutation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 any any DET DT _ _ _ _ _ 31 one one NUM CD NumType=Card _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 34 binding binding VERB VBG VerbForm=Ger _ _ _ _ 35 sites site NOUN NNS Number=Plur _ _ _ _ 36 diminishes diminish VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 activity activity NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 41 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 414 # text = An unidentified Ets family protein binds to the EBS overlapping the consensus GAS motif and appears to negatively regulate the human IL-2R alpha promoter. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 unidentified unidentified ADJ JJ Degree=Pos _ _ _ _ 3 Ets Ets NOUN NNS Number=Plur _ _ _ _ 4 family family NOUN NN Number=Sing _ _ _ _ 5 protein protein VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 binds bind NOUN NNS Number=Plur _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 EBS Eb PROPN NNP Number=Sing _ _ _ _ 10 overlapping overlapp VERB VBG VerbForm=Ger _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 consensus consensus NOUN NN Number=Sing _ _ _ _ 13 GAS gas NOUN NN Number=Sing _ _ _ _ 14 motif motif NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 negatively negatively ADV RB _ _ _ _ _ 19 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 R r NOUN NN Number=Sing _ _ _ _ 26 alpha alpha ADP IN _ _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 415 # text = Thus, IL-2-induced IL-2R alpha promoter activity requires a complex upstream element, which appears to contain binding sites for both positive and negative regulatory factors. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2R 2r PROPN NNP Number=Sing _ _ _ _ 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 complex complex ADJ JJ Degree=Pos _ _ _ _ 17 upstream upstream NOUN NN Number=Sing _ _ _ _ 18 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 which which PRON WDT PronType=Rel _ _ _ _ 21 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 contain contain VERB VB VerbForm=Inf _ _ _ _ 24 binding bind VERB VBG VerbForm=Ger _ _ _ _ 25 sites site NOUN NNS Number=Plur _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 both both CCONJ CC _ _ _ _ _ 28 positive positive ADJ JJ Degree=Pos _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 negative negative ADJ JJ Degree=Pos _ _ _ _ 31 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 32 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 416 # text = Document 003002146 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002146 003002146 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 417 # text = Genomic organization, sequence, and transcriptional regulation of the human eotaxin gene. 1 Genomic Genomic ADJ JJ Degree=Pos _ _ _ _ 2 organization organization NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 8 regulation regulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 eotaxin eotaxin NOUN NN Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 418 # text = Eotaxin is an eosinophil specific beta-chemokine assumed to be involved in eosinophilic inflammatory diseases such as atopic dermatitis, allergic rhinitis, asthma and parasitic infections. 1 Eotaxin Eotaxin PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 eosinophil eosinophil ADJ JJ Degree=Pos _ _ _ _ 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 chemokine chemokine NOUN NN Number=Sing _ _ _ _ 9 assumed assume VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 involved involved ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 eosinophilic eosinophilic ADJ JJ Degree=Pos _ _ _ _ 15 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 16 diseases diseasis NOUN NNS Number=Plur _ _ _ _ 17 such such ADJ JJ Degree=Pos _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 atopic atopic ADJ JJ Degree=Pos _ _ _ _ 20 dermatitis dermatitis NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 allergic allergic ADJ JJ Degree=Pos _ _ _ _ 23 rhinitis rhinitis NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 asthma asthma NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 parasitic parasitic ADJ JJ Degree=Pos _ _ _ _ 28 infections infection NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 419 # text = Its expression is stimulus- and cell-specific. 1 Its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 stimulus stimulus ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 420 # text = We here describe the genomic organisation (3 exons of 132, 112 and 542 bp and 2 introns of 1211 and 378 bp) and sequence including 3 kb of DNA from the immediate 5' upstream region of the human eotaxin gene. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 here here ADV RB PronType=Dem _ _ _ _ 3 describe describe VERB VB VerbForm=Inf _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 6 organisation organisation NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 3 3 NUM CD NumType=Card _ _ _ _ 9 exons exon NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 132 132 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 112 112 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 542 542 NUM CD NumType=Card _ _ _ _ 16 bp bp NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 2 2 NUM CD NumType=Card _ _ _ _ 19 introns intron NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 1211 1211 NUM CD NumType=Card _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 378 378 NUM CD NumType=Card _ _ _ _ 24 bp bp NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 sequence sequence NOUN NN Number=Sing _ _ _ _ 28 including include VERB VBG VerbForm=Ger _ _ _ _ 29 3 3 NUM CD NumType=Card _ _ _ _ 30 kb kb NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 DNA dna NOUN NN Number=Sing _ _ _ _ 33 from from ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 36 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 ' ' PUNCT `` _ _ _ _ _ 38 upstream upstream NOUN NN Number=Sing _ _ _ _ 39 region region NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 human human ADJ JJ Degree=Pos _ _ _ _ 43 eotaxin eotaxin NOUN NN Number=Sing _ _ _ _ 44 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 421 # text = Among the regulatory promoter elements potentially regulating eotaxin gene expression and/or mediating the effects of anti-inflammatory drugs we identified consensus sequences known to interact with nuclear factors like NF-IL6, AP-1, a NF-kappa-B like consensus sequence and gamma-interferon- as well as glucocorticoid response elements. 1 Among among ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 4 promoter promoter NOUN NN Number=Sing _ _ _ _ 5 elements element NOUN NNS Number=Plur _ _ _ _ 6 potentially potentially ADV RB _ _ _ _ _ 7 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 8 eotaxin eotaxin ADP IN _ _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 or or CCONJ CC _ _ _ _ _ 14 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 effects effect NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 19 drugs drug NOUN NNS Number=Plur _ _ _ _ 20 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 21 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 consensus consensus NOUN NN Number=Sing _ _ _ _ 23 sequences sequence NOUN NNS Number=Plur _ _ _ _ 24 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 interact interact VERB VB VerbForm=Inf _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 29 factors factor NOUN NNS Number=Plur _ _ _ _ 30 like like ADP IN _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 IL6 Il6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 kappa kappa NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 -B -b NOUN NN Number=Sing _ _ _ _ 44 like like ADP IN _ _ _ _ _ 45 consensus consensus NOUN NN Number=Sing _ _ _ _ 46 sequence sequence NOUN NN Number=Sing _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ _ 52 as as ADV RB _ _ _ _ _ 53 well well ADV RB Degree=Pos _ _ _ _ 54 as as ADP IN _ _ _ _ _ 55 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 56 response response NOUN NN Number=Sing _ _ _ _ 57 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 422 # text = Document 003002148 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002148 003002148 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 423 # text = Calcium-dependent immediate-early gene induction in lymphocytes is negatively regulated by p21Ha-ras. 1 Calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 4 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 -early -early ADJ JJ Degree=Pos _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 induction induction NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 negatively negatively ADV RB _ _ _ _ _ 12 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 p21Ha p21Ha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 ras ra NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 424 # text = The induction of immediate-early (IE) response genes, such as egr-1, c-fos, and c-jun, occurs rapidly after the activation of T lymphocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 early early ADJ JJ Degree=Pos _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 IE ie NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 response response NOUN NN Number=Sing _ _ _ _ 11 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 such such ADJ JJ Degree=Pos _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 egr egr ADJ JJR Degree=Cmp _ _ _ SpaceAfter=No 16 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 c- c- PUNCT : _ _ _ _ SpaceAfter=No 19 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 c- c- SYM NFP _ _ _ _ SpaceAfter=No 23 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 occurs occurs NOUN NNS Number=Plur _ _ _ _ 26 rapidly rapidly ADV RB _ _ _ _ _ 27 after after ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 425 # text = The process of activation involves calcium mobilization, activation of protein kinase C (PKC), and phosphorylation of tyrosine kinases. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 process process NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 involves involf NOUN NNS Number=Plur _ _ _ _ 6 calcium calcium NOUN NN Number=Sing _ _ _ _ 7 mobilization mobilization NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 kinase kinase NOUN NN Number=Sing _ _ _ _ 13 C C PROPN NNP Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 22 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 426 # text = p21(ras), a guanine nucleotide binding factor, mediates T-cell signal transduction through PKC-dependent and PKC-independent pathways. 1 p21 p21 NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 ras ra NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 guanine guanine NOUN NN Number=Sing _ _ _ _ 8 nucleotide nucleotide NOUN NN Number=Sing _ _ _ _ 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 mediates mediate NOUN NNS Number=Plur _ _ _ _ 13 T- T- PUNCT : _ _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 signal signal NOUN NN Number=Sing _ _ _ _ 16 transduction transduction NOUN NN Number=Sing _ _ _ _ 17 through through ADP IN _ _ _ _ _ 18 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 PKC Pkc ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 independent independent ADJ JJ Degree=Pos _ _ _ _ 25 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 427 # text = The involvement of p21(ras) in the regulation of calcium-dependent signals has been suggested through analysis of its role in the activation of NF-AT. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 involvement involvement NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p21 p21 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 ras ra NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 regulation regulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 signals signal NOUN NNS Number=Plur _ _ _ _ 16 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 18 suggested suggest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 through through ADP IN _ _ _ _ _ 20 analysis analysis NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 23 role role NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 AT at PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 428 # text = We have investigated the inductions of the IE genes in response to calcium signals in Jurkat cells (in the presence of activated p21(ras)) and their correlated consequences. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 inductions induction NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 IE ie ADJ JJ Degree=Pos _ _ _ _ 9 genes gene NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 response response NOUN NN Number=Sing _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 calcium calcium VERB VB VerbForm=Inf _ _ _ _ 14 signals signal NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 presence presence NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 p21 p21 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 ras ra NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 31 correlated correlate ADJ JJ Degree=Pos _ _ _ _ 32 consequences consequences NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 429 # text = The expression of activated p21(ras) negatively regulated the induction of IE genes by calcium ionophore. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 p21 p21 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 ras ra NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 negatively negatively ADV RB _ _ _ _ _ 10 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 IE ie ADJ JJ Degree=Pos _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 calcium calcium NOUN NN Number=Sing _ _ _ _ 18 ionophore ionophore NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 430 # text = This inhibition of calcium-activated IE gene induction was reversed by treatment with cyclosporin A, suggesting the involvement of calcineurin in this regulation. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 calcium- calcium- PUNCT : _ _ _ _ SpaceAfter=No 5 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 IE ie ADJ JJ Degree=Pos _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 induction induction NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 reversed reverse VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 treatment treatment NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 15 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 involvement involvement NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 24 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 431 # text = A later result of inhibition of this activation pathway by p21(ras) was down-regulation of the activity of the transcription factor AP-1 and subsequent coordinate reductions in IL-2 gene expression and protein production. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 later later ADJ JJ Degree=Pos _ _ _ _ 3 result result NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 pathway pathway NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 p21 p21 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 ras ras NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 down down ADV RB _ _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 regulation regulation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 31 coordinate coordinate ADJ JJ Degree=Pos _ _ _ _ 32 reductions reduction NOUN NNS Number=Plur _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 2 2 NUM CD NumType=Card _ _ _ _ 37 gene gene NOUN NN Number=Sing _ _ _ _ 38 expression expression NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 protein protein NOUN NN Number=Sing _ _ _ _ 41 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 432 # text = These results suggest that p2l(ras) is an essential mediator in generating not only positive but also negative modulatory mechanisms controlling the competence of T cells in response to inductive stimulations. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 p2l( p2l( SYM NFP _ _ _ _ SpaceAfter=No 6 ras ra NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 essential essential ADJ JJ Degree=Pos _ _ _ _ 11 mediator mediator NOUN NN Number=Sing _ _ _ _ 12 in in SCONJ IN _ _ _ _ _ 13 generating generate VERB VBG VerbForm=Ger _ _ _ _ 14 not not ADV RB _ _ _ _ _ 15 only only ADV RB _ _ _ _ _ 16 positive positive ADJ JJ Degree=Pos _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 also also ADV RB _ _ _ _ _ 19 negative negative ADJ JJ Degree=Pos _ _ _ _ 20 modulatory modulatory ADJ JJ Degree=Pos _ _ _ _ 21 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 22 controlling controlle VERB VBG VerbForm=Ger _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 competence competence NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 T t PROPN NNP Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 response response NOUN NN Number=Sing _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 inductive inductive ADJ JJ Degree=Pos _ _ _ _ 32 stimulations stimulation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 433 # text = Document 003002155 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002155 003002155 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 434 # text = NF-X2 that binds to the DRA X2-box is activator protein 1. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 X2 x2 NOUN NN Number=Sing _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 DRA DRa PROPN NNP Number=Sing _ _ _ _ 9 X2 X2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 box box NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 activator activator NOUN NN Number=Sing _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 435 # text = Expression cloning of c-Jun. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 cloning cloning NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 436 # text = Human class II MHC 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 class class NOUN NN Number=Sing _ _ _ _ 3 II ii NUM CD NumType=Card _ _ _ _ 4 MHC MHC PROPN NNP Number=Sing _ _ _ _ # sent_id = 437 # text = Ag are a family of cell surface glycoproteins. 1 Ag ag NOUN NN Number=Sing _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 family family NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 surface surface NOUN NN Number=Sing _ _ _ _ 8 glycoproteins glycoprotein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 438 # text = Their constitutive expression is limited to B lymphocytes and thymic epithelial cells. 1 Their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 2 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 limited limited ADJ JJ Degree=Pos _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 B b ADJ JJ Degree=Pos _ _ _ _ 8 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 thymic thymic ADJ JJ Degree=Pos _ _ _ _ 11 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 439 # text = In many other cells their expression can be induced by IFN-gamma. 1 In in ADP IN _ _ _ _ _ 2 many many ADJ JJ Degree=Pos _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 can can AUX MD VerbForm=Fin _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 gamma gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 440 # text = Conserved upstream promoter sequences regulate this tissue-specific expression of class II genes. 1 Conserved Conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 3 promoter promoter NOUN NN Number=Sing _ _ _ _ 4 sequences sequence NOUN NNS Number=Plur _ _ _ _ 5 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 class class NOUN NN Number=Sing _ _ _ _ 13 II ii NUM CD NumType=Card _ _ _ _ 14 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 441 # text = In the DRA promoter, one of these cis-acting regulatory motifs is the X2-box to which nuclear factor X2 (NF-X2) binds. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 DRA DRa NOUN NN Number=Sing _ _ _ _ 4 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 one one NUM CD NumType=Card _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 9 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 -acting -act VERB VBG VerbForm=Ger _ _ _ _ 11 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 12 motifs motif NOUN NNS Number=Plur _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 X2 x2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 box box NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 X2 x2 NUM CD NumType=Card _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 X2 x2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 binds bind NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 442 # text = Here, we present the isolation and characterization of the full-length cDNA clone encoding NF-X2. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 present present VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 isolation isolation NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 characterization characterization NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 full full ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 length length NOUN NN Number=Sing _ _ _ _ 14 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 15 clone clone NOUN NN Number=Sing _ _ _ _ 16 encoding encoding VERB VBG VerbForm=Ger _ _ _ _ 17 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 X2 x2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 443 # text = This cDNA clone was isolated by expression cDNA cloning, and encodes the human c-Jun protein, which together with c-Fos forms the heterodimeric activator protein-1 transcription complex. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 3 clone clone NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 isolated isolate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 9 cloning cloning NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 Jun Jun PROPN NNP Number=Sing _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 which which PRON WDT PronType=Rel _ _ _ _ 21 together together ADV RB _ _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 c- c- SYM NFP _ _ _ _ SpaceAfter=No 24 Fos Fos PROPN NNP Number=Sing _ _ _ _ 25 forms form VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 heterodimeric heterodimeric ADJ JJ Degree=Pos _ _ _ _ 28 activator activator NOUN NN Number=Sing _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 transcription transcription NOUN NN Number=Sing _ _ _ _ 33 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 444 # text = Whereas c-Fos/c-Jun heterodimers do not exist in B cells, they form and bind to the X2-box in class II nonexpressing cells. 1 Whereas whereas SCONJ IN _ _ _ _ _ 2 c-Fos/c c-Fos/c PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 -Jun -Jun PROPN NNP Number=Sing _ _ _ _ 4 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 5 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 exist exist VERB VB VerbForm=Inf _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 B b ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 13 form form VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 X2 X2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 box box NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 class class NOUN NN Number=Sing _ _ _ _ 23 II ii NUM CD NumType=Card _ _ _ _ 24 nonexpressing nonexpresse ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 445 # text = Thus, c-Fos/c-Jun heterodimers might contribute to the repression of DRA gene expression. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 c-Fos/c c-Fos/c PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 Jun Jun PROPN NNP Number=Sing _ _ _ _ 6 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 7 might might AUX MD VerbForm=Fin _ _ _ _ 8 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 repression repression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 DRA DRA NOUN NN Number=Sing _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 446 # text = Document 003002158 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002158 003002158 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 447 # text = The lymphotoxin promoter is stimulated by HTLV-I tax activation of NF-kappa B in human T-cell lines. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 lymphotoxin lymphotoxin NOUN NN Number=Sing _ _ _ _ 3 promoter promoter NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 tax tax NOUN NN Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 448 # text = The HTLV-I transcriptional activator tax was used to gain insight into the mechanism of lymphotoxin (LT; TNF-beta) gene induction. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 5 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 6 activator activator NOUN NN Number=Sing _ _ _ _ 7 tax tax NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 gain gain VERB VB VerbForm=Inf _ _ _ _ 12 insight insight NOUN NN Number=Sing _ _ _ _ 13 into into ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 lymphotoxin lymphotoxin NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 LT Lt NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ; ; PUNCT , _ _ _ _ _ 21 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 449 # text = Tax-expressing cell lines produce LT biologic activity. 1 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 expressing express VERB VBG VerbForm=Ger _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 lines line NOUN NNS Number=Plur _ _ _ _ 6 produce produce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 LT Lt ADJ JJ Degree=Pos _ _ _ _ 8 biologic biologic ADJ JJ Degree=Pos _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 450 # text = An LT promoter (LT-293) 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 LT Lt ADJ JJS Degree=Sup _ _ _ _ 3 promoter promoter NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 LT LT NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 293 293 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ # sent_id = 451 # text = CAT construct that contained an NF-kappa B site was active in the LT-producing C81-66-45 cell line, which contains defective HTLV-I but expresses tax. 1 CAT cat ADJ JJ Degree=Pos _ _ _ _ 2 construct construct NOUN NN Number=Sing _ _ _ _ 3 that that PRON WDT PronType=Rel _ _ _ _ 4 contained contain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 site site NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 active active ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 LT- Lt- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 producing produce VERB VBG VerbForm=Ger _ _ _ _ 17 C81-66 C81-66 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - SYM SYM _ _ _ _ SpaceAfter=No 19 45 45 NUM CD NumType=Card _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 defective defective ADJ JJ Degree=Pos _ _ _ _ 26 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 29 but but CCONJ CC _ _ _ _ _ 30 expresses expresse VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 452 # text = The observation that a mutated LT-kappa B construct (M1-CAT) was inactive in C81-66-45, confirmed the importance of NF-kappa B in LT gene expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 observation observation NOUN NN Number=Sing _ _ _ _ 3 that that PRON WDT PronType=Rel _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 LT Lt NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 construct construct NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 M1 m1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 CAT cat NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 C81-66 C81-66 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 -45 -45 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 confirmed confirm VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 importance importance NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa PROPN NNP Number=Sing _ _ _ _ 29 B b PROPN NNP Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 LT LT PROPN NNP Number=Sing _ _ _ _ 32 gene gene PROPN NNP Number=Sing _ _ _ _ 33 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 453 # text = Tax was transfected into HTLV-I-negative human T-cell lines. 1 Tax tax NOUN NN Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 transfected transfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 into into ADP IN _ _ _ _ _ 5 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 negative negative ADJ JJ Degree=Pos _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 454 # text = Jurkat 1 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ # sent_id = 455 # text = T cells stably expressing tax contained elevated levels of NF-kappa B that directly bound to the LT-kappa B site. 1 T t NUM CD NumType=Card _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 stably stably ADV RB _ _ _ _ _ 4 expressing express VERB VBG VerbForm=Ger _ _ _ _ 5 tax tax NOUN NN Number=Sing _ _ _ _ 6 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 directly directly ADV RB _ _ _ _ _ 16 bound bound ADJ JJ Degree=Pos _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 LT Lt NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa NOUN NN Number=Sing _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ _ 23 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 456 # text = Tax co-transfected with reporter constructs into Jurkat cells maximally activated HTLV-I-LTR-CAT and kappa B-fos-CAT and also activated LT-293 to a lesser extent. 1 Tax tax NOUN NN Number=Sing _ _ _ _ 2 co-transfected co-transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 reporter reporter NOUN NN Number=Sing _ _ _ _ 5 constructs constructs NOUN NNS Number=Plur _ _ _ _ 6 into into ADP IN _ _ _ _ _ 7 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 maximally maximally ADV RB _ _ _ _ _ 10 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 LTR- LTR- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 CAT cat NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 fos fos NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 CAT Cat NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 also also ADV RB _ _ _ _ _ 26 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 LT LT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 293 293 NUM CD NumType=Card _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 lesser lesser ADJ JJR Degree=Cmp _ _ _ _ 33 extent extent NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 457 # text = In JM T cells, tax induced LT-293 activity by two- to four-fold, though there was no induction of M1-CAT. 1 In in ADP IN _ _ _ _ _ 2 JM JM PROPN NNP Number=Sing _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 tax tax NOUN NN Number=Sing _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 LT LT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 293 293 NUM CD NumType=Card _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - SYM SYM _ _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 four four NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 though though SCONJ IN _ _ _ _ _ 21 there there PRON EX _ _ _ _ _ 22 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 no no DET DT _ _ _ _ _ 24 induction induction NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 M1 M1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 CAT cat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 458 # text = The increase in LT-293 CAT activity mirrored the increase in LT biologic activity seen under these conditions. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 increase increase NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 LT LT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 293 293 NUM CD NumType=Card _ _ _ _ 7 CAT cat NOUN NN Number=Sing _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 mirrored mirror VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 increase increase NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 LT LT PROPN NNP Number=Sing _ _ _ _ 14 biologic biologic ADJ JJ Degree=Pos _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 seen see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 under under ADP IN _ _ _ _ _ 18 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 19 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 459 # text = These studies, the first to demonstrate induction of LT promoter activity over basal levels, indicate that HTLV-I tax causes low-level activation of both endogenous LT and the LT promoter, at least in part through activation of NF-kappa B. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 demonstrate demonstrate VERB VB VerbForm=Inf _ _ _ _ 8 induction induction NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 LT Lt ADJ JJ Degree=Pos _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 over over ADP IN _ _ _ _ _ 14 basal basal ADJ JJ Degree=Pos _ _ _ _ 15 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 22 tax tax NOUN NN Number=Sing _ _ _ _ 23 causes cause VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 low low ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 level level NOUN NN Number=Sing _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 both both DET DT _ _ _ _ _ 30 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 31 LT Lt NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 LT Lt ADJ JJ Degree=Pos _ _ _ _ 35 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 at at ADV RB _ _ _ _ _ 38 least least ADV RBS Degree=Sup _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 part part NOUN NN Number=Sing _ _ _ _ 41 through through ADP IN _ _ _ _ _ 42 activation activation NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 kappa kappa PROPN NNP Number=Sing _ _ _ _ 47 B. B. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 460 # text = Document 003002162 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002162 003002162 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 461 # text = Triggering of HLA-DR antigens differentially modulates tumor necrosis factor alpha release by B cells at distinct stage of maturation. 1 Triggering Triggering ADP IN _ _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 DR dr PROPN NNP Number=Sing _ _ _ _ 6 antigens antigen NOUN NNS Number=Plur _ _ _ _ 7 differentially differentially ADV RB _ _ _ _ _ 8 modulates modulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 tumor tumor NOUN NN Number=Sing _ _ _ _ 10 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 alpha alpha NOUN NN Number=Sing _ _ _ _ 13 release release NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 B b ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 at at ADP IN _ _ _ _ _ 18 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 19 stage stage NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 maturation maturation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 462 # text = Triggering of HLA class II antigens by the anti-HLA-DR monoclonal antibody (mAb) L243 significantly (P < 0.05) and differentially enhanced the release of tumor necrosis factor alpha (TNF-alpha) by the non-Hodgkin's lymphoma cells Ri-I, Ci-I, and Sc-I, which are at a distinct stage of B-cell differentiation, and by the more mature Burkitt lymphoma cell Raji; in contrast, it did not induce TNF-alpha release by the pre-B leukemia cells Nalm-6 and BV173. 1 Triggering Triggering ADP IN _ _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HLA HLA PROPN NNP Number=Sing _ _ _ _ 4 class class NOUN NN Number=Sing _ _ _ _ 5 II ii NUM CD NumType=Card _ _ _ _ 6 antigens antigen NOUN NNS Number=Plur _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 anti-HLA anti-hla ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 DR Dr ADJ JJ Degree=Pos _ _ _ _ 12 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 13 antibody antibody NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 mAb mAb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 L243 L243 NOUN NN Number=Sing _ _ _ _ 18 significantly significantly ADV RB _ _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 P p NOUN NN Number=Sing _ _ _ _ 21 < < PUNCT -LRB- _ _ _ _ _ 22 0.05 0.05 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 differentially differentially ADV RB _ _ _ _ _ 26 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 release release NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 tumor tumor NOUN NN Number=Sing _ _ _ _ 31 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 32 factor factor NOUN NN Number=Sing _ _ _ _ 33 alpha alpha NOUN NN Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 by by ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 non-Hodgkin non-hodgkin NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 's 's PART POS _ _ _ _ _ 43 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ _ 45 Ri ri PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT , _ _ _ _ SpaceAfter=No 47 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 Ci Ci PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT , _ _ _ _ SpaceAfter=No 51 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 and and CCONJ CC _ _ _ _ _ 54 Sc Sc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 55 - - PUNCT , _ _ _ _ SpaceAfter=No 56 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 57 , , PUNCT , _ _ _ _ _ 58 which which PRON WDT PronType=Rel _ _ _ _ 59 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 60 at at ADP IN _ _ _ _ _ 61 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 62 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 63 stage stage NOUN NN Number=Sing _ _ _ _ 64 of of ADP IN _ _ _ _ _ 65 B b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 66 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 67 cell cell NOUN NN Number=Sing _ _ _ _ 68 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 69 , , PUNCT , _ _ _ _ _ 70 and and CCONJ CC _ _ _ _ _ 71 by by ADP IN _ _ _ _ _ 72 the the DET DT Definite=Def|PronType=Art _ _ _ _ 73 more more ADV RBR _ _ _ _ _ 74 mature mature ADJ JJ Degree=Pos _ _ _ _ 75 Burkitt Burkitt PROPN NNP Number=Sing _ _ _ _ 76 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 77 cell cell NOUN NN Number=Sing _ _ _ _ 78 Raji Raji PROPN NNP Number=Sing _ _ _ SpaceAfter=No 79 ; ; PUNCT , _ _ _ _ _ 80 in in ADP IN _ _ _ _ _ 81 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 82 , , PUNCT , _ _ _ _ _ 83 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 84 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 85 not not PART RB _ _ _ _ _ 86 induce induce VERB VB VerbForm=Inf _ _ _ _ 87 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 88 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 89 alpha alpha NOUN NN Number=Sing _ _ _ _ 90 release release NOUN NN Number=Sing _ _ _ _ 91 by by ADP IN _ _ _ _ _ 92 the the DET DT Definite=Def|PronType=Art _ _ _ _ 93 pre pre X AFX _ _ _ _ SpaceAfter=No 94 -B -b ADJ JJ Degree=Pos _ _ _ _ 95 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 96 cells cell NOUN NNS Number=Plur _ _ _ _ 97 Nalm Nalm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 98 - - SYM SYM _ _ _ _ SpaceAfter=No 99 6 6 NUM CD NumType=Card _ _ _ _ 100 and and CCONJ CC _ _ _ _ _ 101 BV BV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 102 173 173 NUM CD NumType=Card _ _ _ SpaceAfter=No 103 . . PUNCT . _ _ _ _ _ # sent_id = 463 # text = TNF-alpha release peaked at 24 h and decreased thereafter, and it was dose dependent and preceded by an increase of TNF-alpha mRNA detectable after 3 h of stimulation with mAb L243. 1 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 alpha alpha NOUN NN Number=Sing _ _ _ _ 4 release release NOUN NN Number=Sing _ _ _ _ 5 peaked peake VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 at at ADP IN _ _ _ _ _ 7 24 24 NUM CD NumType=Card _ _ _ _ 8 h h NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 thereafter thereafter ADV RB _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 dose dose VERB VB VerbForm=Inf _ _ _ _ 17 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 preceded preced VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 increase increase NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 alpha alpha PROPN NNP Number=Sing _ _ _ _ 27 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 28 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 29 after after ADP IN _ _ _ _ _ 30 3 3 NUM CD NumType=Card _ _ _ _ 31 h h NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 mAb mAb PROPN NNP Number=Sing _ _ _ _ 36 L243 L243 NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 464 # text = Secreted TNF-alpha mediated the enhancement of nuclear factor kappa B (NF-kappa B) and activator protein-1 (AP-1) binding activity; in fact, the triggering of HLA-DR antigens in the presence of antihuman TNF-alpha-neutralizing antibodies did not upregulate NF-kappa B and AP-1. 1 Secreted Secret VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 alpha alpha NOUN NN Number=Sing _ _ _ _ 5 mediated mediate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 activator activator NOUN NN Number=Sing _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 binding bind VERB VBG VerbForm=Ger _ _ _ _ 30 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ; ; PUNCT , _ _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 fact fact NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 triggering triggering NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 DR dr PROPN NNP Number=Sing _ _ _ _ 41 antigens antigen NOUN NNS Number=Plur _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 presence presence NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 antihuman antihuman ADJ JJ Degree=Pos _ _ _ _ 47 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 neutralizing neutralizing VERB VBG VerbForm=Ger _ _ _ _ 52 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 53 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 54 not not PART RB _ _ _ _ _ 55 upregulate upregulate VERB VB VerbForm=Inf _ _ _ _ 56 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 kappa kappa NOUN NN Number=Sing _ _ _ _ 59 B b NOUN NN Number=Sing _ _ _ _ 60 and and CCONJ CC _ _ _ _ _ 61 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 62 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 63 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 64 . . PUNCT . _ _ _ _ _ # sent_id = 465 # text = In contrast, released TNF-alpha was not responsible for the homotypic aggregation of Ri-I, Ci-I, Sc-I, and Raji cells induced by mAb L243, and it did not affect the proliferation of B cells investigated. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 released release VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 homotypic homotypic ADJ JJ Degree=Pos _ _ _ _ 14 aggregation aggregation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 Ri ri PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 Ci Ci PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 Sc Sc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 Raji Raji PROPN NNP Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 mAb mAb PROPN NNP Number=Sing _ _ _ _ 34 L243 L243 NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 38 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 39 not not PART RB _ _ _ _ _ 40 affect affect VERB VB VerbForm=Inf _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 B b ADJ JJ Degree=Pos _ _ _ _ 45 cells cell NOUN NNS Number=Plur _ _ _ _ 46 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 466 # text = Altogether, our data demonstrate that: (a) the ability of B cells to release TNF-alpha after triggering of HLA-DR antigens depends on their stage of differentiation; (b) levels of released TNF-alpha seem to correlate with the stage of B-cell maturation but do not correlate with the amounts of cell surface HLA-DR antigens; (c) secreted TNF-alpha regulates the levels of expression of NF-kappa B and AP-1 by an autocrine loop; and (d) intracellular signals mediating TNF-alpha release by B cells are distinct from those regulating homotypic aggregation and proliferation. 1 Altogether altogether ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 data data NOUN NN Number=Sing _ _ _ _ 5 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 7 : : PUNCT : _ _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 a a X LS _ _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 ability ability NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 B b ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 release release VERB VB VerbForm=Inf _ _ _ _ 18 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 alpha alpha NOUN NN Number=Sing _ _ _ _ 21 after after SCONJ IN _ _ _ _ _ 22 triggering triggere VERB VBG VerbForm=Ger _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 DR dr PROPN NNP Number=Sing _ _ _ _ 27 antigens antigen NOUN NNS Number=Plur _ _ _ _ 28 depends depend VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 on on ADP IN _ _ _ _ _ 30 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 31 stage stage NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 ; ; PUNCT , _ _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 b b NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 levels level NOUN NNS Number=Plur _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 released release VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 alpha alpha NOUN NN Number=Sing _ _ _ _ 44 seem seem VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 45 to to PART TO _ _ _ _ _ 46 correlate correlate VERB VB VerbForm=Inf _ _ _ _ 47 with with ADP IN _ _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 stage stage NOUN NN Number=Sing _ _ _ _ 50 of of ADP IN _ _ _ _ _ 51 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 cell cell NOUN NN Number=Sing _ _ _ _ 54 maturation maturation NOUN NN Number=Sing _ _ _ _ 55 but but CCONJ CC _ _ _ _ _ 56 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 57 not not PART RB _ _ _ _ _ 58 correlate correlate VERB VB VerbForm=Inf _ _ _ _ 59 with with ADP IN _ _ _ _ _ 60 the the DET DT Definite=Def|PronType=Art _ _ _ _ 61 amounts amount NOUN NNS Number=Plur _ _ _ _ 62 of of ADP IN _ _ _ _ _ 63 cell cell NOUN NN Number=Sing _ _ _ _ 64 surface surface NOUN NN Number=Sing _ _ _ _ 65 HLA HLa NOUN NN Number=Sing _ _ _ SpaceAfter=No 66 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 67 DR dr NOUN NN Number=Sing _ _ _ _ 68 antigens antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 69 ; ; PUNCT , _ _ _ _ _ 70 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 71 c c X LS _ _ _ _ SpaceAfter=No 72 ) ) PUNCT -RRB- _ _ _ _ _ 73 secreted secret VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 74 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 75 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 76 alpha alpha NOUN NN Number=Sing _ _ _ _ 77 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 78 the the DET DT Definite=Def|PronType=Art _ _ _ _ 79 levels level NOUN NNS Number=Plur _ _ _ _ 80 of of ADP IN _ _ _ _ _ 81 expression expression NOUN NN Number=Sing _ _ _ _ 82 of of ADP IN _ _ _ _ _ 83 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 84 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 85 kappa kappa NOUN NN Number=Sing _ _ _ _ 86 B b NOUN NN Number=Sing _ _ _ _ 87 and and CCONJ CC _ _ _ _ _ 88 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 89 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 90 1 1 NUM CD NumType=Card _ _ _ _ 91 by by ADP IN _ _ _ _ _ 92 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 93 autocrine autocrine ADJ JJ Degree=Pos _ _ _ _ 94 loop loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 95 ; ; PUNCT , _ _ _ _ _ 96 and and CCONJ CC _ _ _ _ _ 97 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 98 d would PROPN NNP Number=Sing _ _ _ SpaceAfter=No 99 ) ) PUNCT -RRB- _ _ _ _ _ 100 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 101 signals signal NOUN NNS Number=Plur _ _ _ _ 102 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 103 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 104 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 105 alpha alpha NOUN NN Number=Sing _ _ _ _ 106 release release NOUN NN Number=Sing _ _ _ _ 107 by by ADP IN _ _ _ _ _ 108 B b ADJ JJ Degree=Pos _ _ _ _ 109 cells cell NOUN NNS Number=Plur _ _ _ _ 110 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 111 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 112 from from ADP IN _ _ _ _ _ 113 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 114 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 115 homotypic homotypic ADJ JJ Degree=Pos _ _ _ _ 116 aggregation aggregation NOUN NN Number=Sing _ _ _ _ 117 and and CCONJ CC _ _ _ _ _ 118 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 119 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 467 # text = Document 003002164 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002164 003002164 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 468 # text = The Epstein-Barr virus oncoprotein latent membrane protein 1 engages the tumor necrosis factor receptor-associated proteins TRADD and receptor-interacting protein (RIP) but does not induce apoptosis or require RIP for NF-kappaB activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 Barr Barr PROPN NNP Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 oncoprotein oncoprotein ADV WRB PronType=Rel _ _ _ _ 7 latent latent ADJ JJ Degree=Pos _ _ _ _ 8 membrane membrane NOUN NN Number=Sing _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 1 1 NUM CD NumType=Card _ _ _ _ 11 engages engage VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 tumor tumor NOUN NN Number=Sing _ _ _ _ 14 necrosis necrosis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 receptor- receptor- PUNCT , _ _ _ _ SpaceAfter=No 17 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 proteins protein NOUN NNS Number=Plur _ _ _ _ 19 TRADD Tradd NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 receptor- receptor- PUNCT , _ _ _ _ SpaceAfter=No 22 interacting interact VERB VBG VerbForm=Ger _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 RIP rip INTJ UH _ _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 but but CCONJ CC _ _ _ _ _ 28 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 not not PART RB _ _ _ _ _ 30 induce induce VERB VB VerbForm=Inf _ _ _ _ 31 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 32 or or CCONJ CC _ _ _ _ _ 33 require require VERB VB VerbForm=Inf _ _ _ _ 34 RIP RIP PROPN NNP Number=Sing _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 39 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 469 # text = A site in the Epstein-Barr virus (EBV) transforming protein LMP1 that constitutively associates with the tumor necrosis factor receptor 1 (TNFR1)-associated death domain protein TRADD to mediate NF-kappaB and c-Jun N-terminal kinase activation is critical for long-term lymphoblastoid cell proliferation. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 site site NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 Barr Barr PROPN NNP Number=Sing _ _ _ _ 8 virus virus NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 transforming transform VERB VBG VerbForm=Ger _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 LMP1 Lmp1 NOUN NN Number=Sing _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 constitutively constitutively ADV RB _ _ _ _ _ 17 associates associate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 tumor tumor NOUN NN Number=Sing _ _ _ _ 21 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 receptor receptor NOUN NN Number=Sing _ _ _ _ 24 1 1 NUM CD NumType=Card _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 TNFR1 TNFR1 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 death death NOUN NN Number=Sing _ _ _ _ 31 domain domain NOUN NN Number=Sing _ _ _ _ 32 protein protein NOUN NN Number=Sing _ _ _ _ 33 TRADD TRADD NOUN NN Number=Sing _ _ _ _ 34 to to PART TO _ _ _ _ _ 35 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 36 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 c c NOUN NN Abbr=Yes|Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 Jun Jun PROPN NNP Number=Sing _ _ _ _ 43 N- N- PUNCT : _ _ _ _ SpaceAfter=No 44 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 45 kinase kinase NOUN NN Number=Sing _ _ _ _ 46 activation activation NOUN NN Number=Sing _ _ _ _ 47 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 48 critical critical ADJ JJ Degree=Pos _ _ _ _ 49 for for ADP IN _ _ _ _ _ 50 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 term term NOUN NN Number=Sing _ _ _ _ 53 lymphoblastoid lymphoblastoid NOUN NN Number=Sing _ _ _ _ 54 cell cell NOUN NN Number=Sing _ _ _ _ 55 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 470 # text = We now find that LMP1 signaling through TRADD differs from TNFR1 signaling through TRADD. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 now now ADV RB _ _ _ _ _ 3 find find VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ _ 6 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 7 through through ADP IN _ _ _ _ _ 8 TRADD tRADd NOUN NN Number=Sing _ _ _ _ 9 differs differ NOUN NNS Number=Plur _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 TNFR1 TNFR1 PROPN NNP Number=Sing _ _ _ _ 12 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 13 through through ADP IN _ _ _ _ _ 14 TRADD TRADD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 471 # text = LMP1 needs only 11 amino acids to activate NF-kappaB or synergize with TRADD in NF-kappaB activation, while TNFR1 requires approximately 70 residues. 1 LMP1 LMP1 NOUN NN Number=Sing _ _ _ _ 2 needs need VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 only only ADV RB _ _ _ _ _ 4 11 11 NUM CD NumType=Card _ _ _ _ 5 amino amino NOUN NN Number=Sing _ _ _ _ 6 acids acid NOUN NNS Number=Plur _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 activate activate VERB VB VerbForm=Inf _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 synergize synergize VERB VB VerbForm=Inf _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 TRADD tRADd NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 while while SCONJ IN _ _ _ _ _ 23 TNFR1 TNFR1 PROPN NNP Number=Sing _ _ _ _ 24 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 approximately approximately ADV RB _ _ _ _ _ 26 70 70 NUM CD NumType=Card _ _ _ _ 27 residues residue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 472 # text = Further, LMP1 does not require TRADD residues 294 to 312 for NF-kappaB activation, while TNFR1 requires TRADD residues 296 to 302. 1 Further further ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ _ 4 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 require require VERB VB VerbForm=Inf _ _ _ _ 7 TRADD tRADd NOUN NN Number=Sing _ _ _ _ 8 residues residue NOUN NNS Number=Plur _ _ _ _ 9 294 294 NUM CD NumType=Card _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 312 312 NUM CD NumType=Card _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 while while SCONJ IN _ _ _ _ _ 19 TNFR1 TNFR1 PROPN NNP Number=Sing _ _ _ _ 20 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 TRADD Tradd PROPN NNP Number=Sing _ _ _ _ 22 residues residue VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 296 296 NUM CD NumType=Card _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 302 302 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 473 # text = LMP1 is partially blocked for NF-kappaB activation by a TRADD mutant consisting of residues 122 to 293. 1 LMP1 Lmp1 NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 partially partially ADV RB _ _ _ _ _ 4 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 TRADD tRADd NOUN NN Number=Sing _ _ _ _ 13 mutant mutant NOUN NN Number=Sing _ _ _ _ 14 consisting consisting NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 residues residue NOUN NNS Number=Plur _ _ _ _ 17 122 122 NUM CD NumType=Card _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 293 293 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 474 # text = Unlike TNFR1, LMP1 can interact directly with receptor-interacting protein (RIP) and stably associates with RIP in EBV-transformed lymphoblastoid cell lines. 1 Unlike unlike ADP IN _ _ _ _ _ 2 TNFR1 TNFR1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ _ 5 can can AUX MD VerbForm=Fin _ _ _ _ 6 interact interact VERB VB VerbForm=Inf _ _ _ _ 7 directly directly ADV RB _ _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 interacting interacting VERB VBG VerbForm=Ger _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 RIP rip INTJ UH _ _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 stably stably ADV RB _ _ _ _ _ 18 associates associate NOUN NNS Number=Plur _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 RIP Rip PROPN NNP Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 EBV- EBV- PUNCT : _ _ _ _ SpaceAfter=No 23 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 lymphoblastoid lymphoblastoid ADJ JJ Degree=Pos _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 475 # text = Surprisingly, LMP1 does not require RIP for NF-kappaB activation. 1 Surprisingly surprisingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ _ 4 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 require require VERB VB VerbForm=Inf _ _ _ _ 7 RIP Rip PROPN NNP Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 476 # text = Despite constitutive association with TRADD or RIP, LMP1 does not induce apoptosis in EBV-negative Burkitt lymphoma or human embryonic kidney 293 cells. 1 Despite despite ADP IN _ _ _ _ _ 2 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 3 association association NOUN NN Number=Sing _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 TRADD tRADd PROPN NNP Number=Sing _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 RIP rip PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ _ 10 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 induce induce VERB VB VerbForm=Inf _ _ _ _ 13 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 negative negative ADJ JJ Degree=Pos _ _ _ _ 18 Burkitt Burkitt NOUN NN Number=Sing _ _ _ _ 19 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 embryonic embryonic ADJ JJ Degree=Pos _ _ _ _ 23 kidney kidney NOUN NN Number=Sing _ _ _ _ 24 293 293 NUM CD NumType=Card _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 477 # text = These results add a different perspective to the molecular interactions through which LMP1, TRADD, and RIP participate in B-lymphocyte activation and growth. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 add add VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 different different ADJ JJ Degree=Pos _ _ _ _ 6 perspective perspective NOUN NN Number=Sing _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 10 interactions interaction NOUN NNS Number=Plur _ _ _ _ 11 through through ADP IN _ _ _ _ _ 12 which which DET WDT PronType=Int _ _ _ _ 13 LMP1 LMP1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 TRADD TRADD NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 RIP rip INTJ UH _ _ _ _ _ 19 participate participate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 B b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 478 # text = Document 003002175 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002175 003002175 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 479 # text = Inhibition of NF-kappa B activity in human T lymphocytes induces caspase-dependent apoptosis without detectable activation of caspase-1 and -3. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 T T PROPN NNP Number=Sing _ _ _ _ 11 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 caspase caspase NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 16 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 17 without without ADP IN _ _ _ _ _ 18 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 caspase caspase NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 - - SYM SYM _ _ _ _ SpaceAfter=No 26 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 480 # text = NF-kappa B is involved in the transcriptional control of various genes that act as extrinsic and intrinsic survival factors for T cells. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 involved involved ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 10 control control NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 various various ADJ JJ Degree=Pos _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 act act VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 extrinsic extrinsic ADJ JJ Degree=Pos _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 intrinsic intrinsic ADJ JJ Degree=Pos _ _ _ _ 20 survival survival NOUN NN Number=Sing _ _ _ _ 21 factors factor NOUN NNS Number=Plur _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 481 # text = Our findings show that suppression of NF-kappa B activity with cell-permeable SN50 peptide, which masks the nuclear localization sequence of NF-kappa B1 dimers and prevents their nuclear localization, induces apoptosis in resting normal human PBL. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 suppression suppression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 permeable permeable ADJ JJ Degree=Pos _ _ _ _ 16 SN50 SN50 NOUN NN Number=Sing _ _ _ _ 17 peptide peptide NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 masks mask VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 23 localization localization NOUN NN Number=Sing _ _ _ _ 24 sequence sequence NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa PROPN NNP Number=Sing _ _ _ _ 29 B1 b1 PROPN NNP Number=Sing _ _ _ _ 30 dimers dimer NOUN NNS Number=Plur _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 prevents prevent NOUN NNS Number=Plur _ _ _ _ 33 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 34 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 35 localization localization NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 induces induce NOUN NNS Number=Plur _ _ _ _ 38 apoptosis apoptosis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 in in SCONJ IN _ _ _ _ _ 40 resting rest VERB VBG VerbForm=Ger _ _ _ _ 41 normal normal ADJ JJ Degree=Pos _ _ _ _ 42 human human ADJ JJ Degree=Pos _ _ _ _ 43 PBL pBl NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 482 # text = Inhibition of NF-kappa B resulted in the externalization of phosphatidylserine, induction of DNA breaks, and morphological changes consistent with apoptosis. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B B PROPN NNP Number=Sing _ _ _ _ 7 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 externalization externalization NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 phosphatidylserine phosphatidylserine NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 induction induction NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ _ 17 breaks break NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 morphological morphological ADJ JJ Degree=Pos _ _ _ _ 21 changes change NOUN NNS Number=Plur _ _ _ _ 22 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 483 # text = DNA fragmentation was efficiently blocked by the caspase inhibitor Z-VAD-fmk and partially blocked by Ac-DEVD-fmk, suggesting that SN50-mediated apoptosis is caspase-dependent. 1 DNA dna NOUN NN Number=Sing _ _ _ _ 2 fragmentation fragmentation NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 efficiently efficiently ADV RB _ _ _ _ _ 5 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 caspase caspase NOUN NN Number=Sing _ _ _ _ 9 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 10 Z z NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 VAD Vad NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 fmk fmk NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 partially partially ADV RB _ _ _ _ _ 17 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 Ac- Ac- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 DEVD Devd NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 fmk fmk NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 SN50 SN50 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 caspase caspase NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 484 # text = Interestingly, apoptosis induced by NF-kappa B suppression, in contrast to that induced by TPEN (N,N,N',N'-tetrakis [2-pyridylmethyl]ethylenediamine) or soluble Fas ligand (CD95), was observed in the absence of active death effector proteases caspase-1-like (IL-1 converting enzyme), caspase-3-like (CPP32/Yama/apopain), and caspase-6-like and without cleavage of caspase-3 substrates poly(ADP-ribose) polymerase and DNA fragmentation factor-45. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 apoptosis apoptosis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B b PROPN NNP Number=Sing _ _ _ _ 10 suppression suppression NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 contrast contrast NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 TPEN TPEN PROPN NNP Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 N,N,N' N,N,N' PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ SpaceAfter=No 22 N N PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ' 's PART POS _ _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 tetrakis tetrakis NOUN NN Number=Sing _ _ _ _ 26 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 pyridylmethyl pyridylmethyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 ethylenediamine ethylenediamine NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 or or CCONJ CC _ _ _ _ _ 34 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 35 Fas Fas PROPN NNP Number=Sing _ _ _ _ 36 ligand ligand NOUN NN Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 CD95 CD95 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 42 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 absence absence NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 active active ADJ JJ Degree=Pos _ _ _ _ 48 death death NOUN NN Number=Sing _ _ _ _ 49 effector effector NOUN NN Number=Sing _ _ _ _ 50 proteases protease VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 51 caspase caspase NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 like like INTJ UH _ _ _ _ _ 56 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 57 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 58 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 59 1 1 NUM CD NumType=Card _ _ _ _ 60 converting converting NOUN NN Number=Sing _ _ _ _ 61 enzyme enzyme NOUN NN Number=Sing _ _ _ SpaceAfter=No 62 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 63 , , PUNCT , _ _ _ _ _ 64 caspase caspase NOUN NN Number=Sing _ _ _ SpaceAfter=No 65 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 66 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 67 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 68 like like INTJ UH _ _ _ _ _ 69 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 70 CPP32/ CPP32/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 71 Yama/ Yama/ PUNCT HYPH _ _ _ _ SpaceAfter=No 72 apopain apopain NOUN NN Number=Sing _ _ _ SpaceAfter=No 73 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 74 , , PUNCT , _ _ _ _ _ 75 and and CCONJ CC _ _ _ _ _ 76 caspase caspase NOUN NN Number=Sing _ _ _ SpaceAfter=No 77 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 78 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 79 -like -like ADJ JJ Degree=Pos _ _ _ _ 80 and and CCONJ CC _ _ _ _ _ 81 without without ADP IN _ _ _ _ _ 82 cleavage cleavage NOUN NN Number=Sing _ _ _ _ 83 of of ADP IN _ _ _ _ _ 84 caspase caspase NOUN NN Number=Sing _ _ _ SpaceAfter=No 85 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 86 3 3 NUM CD NumType=Card _ _ _ _ 87 substrates substrate NOUN NNS Number=Plur _ _ _ _ 88 poly poly ADV RB _ _ _ _ SpaceAfter=No 89 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 90 ADP Adp NOUN NN Number=Sing _ _ _ SpaceAfter=No 91 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 92 ribose ribose NOUN NN Number=Sing _ _ _ SpaceAfter=No 93 ) ) PUNCT -RRB- _ _ _ _ _ 94 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 95 and and CCONJ CC _ _ _ _ _ 96 DNA dna NOUN NN Number=Sing _ _ _ _ 97 fragmentation fragmentation NOUN NN Number=Sing _ _ _ _ 98 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 99 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 100 45 45 NUM CD NumType=Card _ _ _ SpaceAfter=No 101 . . PUNCT . _ _ _ _ _ # sent_id = 485 # text = These findings suggest either low level of activation is required or that different caspases are involved. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 either either CCONJ CC _ _ _ _ _ 5 low low ADJ JJ Degree=Pos _ _ _ _ 6 level level NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 that that PRON WDT PronType=Dem _ _ _ _ 13 different different ADJ JJ Degree=Pos _ _ _ _ 14 caspases caspase NOUN NNS Number=Plur _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 involved involved ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 486 # text = Preactivation of T cells resulting in NF-kappa B nuclear translocation protected cells from SN50-induced apoptosis. 1 Preactivation Preactivation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 resulting result VERB VBG VerbForm=Ger _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B B PROPN NNP Number=Sing _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 translocation translocation NOUN NN Number=Sing _ _ _ _ 13 protected protect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 SN50 SN50 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 487 # text = Our findings demonstrate an essential role of NF-kappa B in survival of naive PBL. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 essential essential ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 survival survival NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 naive naive ADJ JJ Degree=Pos _ _ _ _ 16 PBL pBl NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 488 # text = Document 003002177 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002177 003002177 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 489 # text = Dysregulation of monocytic nuclear factor-kappa B by oxidized low-density lipoprotein. 1 Dysregulation Dysregulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 oxidized oxidize ADJ JJ Degree=Pos _ _ _ _ 11 low low ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 density density NOUN NN Number=Sing _ _ _ _ 14 lipoprotein lipoprotein NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 490 # text = Nuclear factor-kappa B (NF-kappa B)/Rel transcription factors may be involved in atherosclerosis, as is suggested by the presence of activated NF-kappa B in human atherosclerotic lesions. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 Rel Rel PROPN NNP Number=Sing _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ _ 16 may may AUX MD VerbForm=Fin _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 involved involved ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 atherosclerosis atherosclerosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 as as SCONJ IN _ _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 suggested suggest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 presence presence NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappa kappa NOUN NN Number=Sing _ _ _ _ 33 B b NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 human human ADJ JJ Degree=Pos _ _ _ _ 36 atherosclerotic atherosclerotic ADJ JJ Degree=Pos _ _ _ _ 37 lesions lesion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 491 # text = The aim of the present study was to investigate the effects of oxidized LDL (oxLDL) on the NF-kappa B system in human THP-1 monocytic cells as well as adherent monocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 aim aim NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 present present ADJ JJ Degree=Pos _ _ _ _ 6 study study NOUN NN Number=Sing _ _ _ _ 7 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 effects effect NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 oxidized oxidize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 LDL LDL NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 oxLDL oxLDL INTJ UH _ _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappa kappa NOUN NN Number=Sing _ _ _ _ 23 B b NOUN NN Number=Sing _ _ _ _ 24 system system NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 as as ADV RB _ _ _ _ _ 33 well well ADV RB Degree=Pos _ _ _ _ 34 as as ADP IN _ _ _ _ _ 35 adherent adherent ADJ JJ Degree=Pos _ _ _ _ 36 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 492 # text = Our results demonstrate that short-term incubation of these cells with oxLDL activated p50/p65 containing NF-kappa B dimers and induced the expression of the target gene IL-8. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 short short ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 term term NOUN NN Number=Sing _ _ _ _ 8 incubation incubation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 oxLDL oxLDL PROPN NNP Number=Sing _ _ _ _ 14 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 / / PUNCT , _ _ _ _ SpaceAfter=No 17 p65 p65 NOUN NN Number=Sing _ _ _ _ 18 containing contain VERB VBG VerbForm=Ger _ _ _ _ 19 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa NOUN NN Number=Sing _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ _ 23 dimers dimer NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 target target NOUN NN Number=Sing _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ _ 32 IL il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 493 # text = This activation of NF-kappa B was inhibited by the antioxidant and H2O2 scavenger pyrrolidine dithiocarbamate and the proteasome inhibitor PSI. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B b PROPN NNP Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 antioxidant antioxidant NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 H2O2 H2O2 NUM CD NumType=Card _ _ _ _ 15 scavenger scavenger NOUN NN Number=Sing _ _ _ _ 16 pyrrolidine pyrrolidine NOUN NN Number=Sing _ _ _ _ 17 dithiocarbamate dithiocarbamate NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 proteasome proteasome ADJ JJ Degree=Pos _ _ _ _ 21 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 22 PSI pSi NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 494 # text = The oxLDL-induced NF-kappa B activation was accompanied by an initial depletion of I kappa B-alpha followed by a slight transient increase in the level of this inhibitor protein. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 oxLDL oxldl NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 initial initial ADJ JJ Degree=Pos _ _ _ _ 15 depletion depletion NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B- B- PUNCT , _ _ _ _ SpaceAfter=No 20 alpha alpha ADV RB _ _ _ _ _ 21 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 slight slight ADJ JJ Degree=Pos _ _ _ _ 25 transient transient NOUN NN Number=Sing _ _ _ _ 26 increase increase NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 level level NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 32 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 33 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 495 # text = In contrast, long-term treatment with oxLDL prevented the lipopolysaccharide-induced depletion of I kappa B-alpha, accompanied by an inhibition of both NF-kappa B activation and the expression of tumor necrosis factor-alpha and interleukin-1 beta genes. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 term term NOUN NN Number=Sing _ _ _ _ 7 treatment treatment NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 oxLDL oxLDL PROPN NNP Number=Sing _ _ _ _ 10 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 depletion depletion NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B- B- PUNCT , _ _ _ _ SpaceAfter=No 20 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 accompanied accompany VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 both both CCONJ CC _ _ _ _ _ 28 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappa kappa NOUN NN Number=Sing _ _ _ _ 31 B b NOUN NN Number=Sing _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 tumor tumor NOUN NN Number=Sing _ _ _ _ 38 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 39 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 alpha alpha NOUN NN Number=Sing _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 1 1 NUM CD NumType=Card _ _ _ _ 46 beta beta NOUN NN Number=Sing _ _ _ _ 47 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 496 # text = These observations provide additional evidence that oxLDL is a potent modulator of gene expression and suggest that (dys)regulation of NF-kappa B/Rel is likely to play an important role in atherogenesis. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 additional additional ADJ JJ Degree=Pos _ _ _ _ 5 evidence evidence NOUN NN Number=Sing _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 oxLDL oxLDL PROPN NNP Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 potent potent NOUN NN Number=Sing _ _ _ _ 11 modulator modulator NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 dys dy NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 regulation regulation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa PROPN NNP Number=Sing _ _ _ _ 26 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 / / PUNCT , _ _ _ _ SpaceAfter=No 28 Rel Rel PROPN NNP Number=Sing _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 likely likely ADJ JJ Degree=Pos _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 play play VERB VB VerbForm=Inf _ _ _ _ 33 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 important important ADJ JJ Degree=Pos _ _ _ _ 35 role role NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 atherogenesis atherogenesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 497 # text = Document 003002181 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002181 003002181 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 498 # text = The interleukin-8 AP-1 and kappa 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 8 8 NUM CD NumType=Card _ _ _ _ 5 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 499 # text = B-like sites are genetic end targets of FK506-sensitive pathway accompanied by calcium mobilization. 1 B b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 like like ADJ JJ Degree=Pos _ _ _ _ 4 sites site NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 7 end end NOUN NN Number=Sing _ _ _ _ 8 targets target NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 FK506 FK506 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT : _ _ _ _ SpaceAfter=No 12 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 13 pathway pathway NOUN NN Number=Sing _ _ _ _ 14 accompanied accompany VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 calcium calcium NOUN NN Number=Sing _ _ _ _ 17 mobilization mobilization NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 500 # text = FK506, an immunosuppressant, inhibits the production of several cytokines in T lymphocytes. 1 FK506 FK506 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 immunosuppressant immunosuppressant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 production production NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 several several ADJ JJ Degree=Pos _ _ _ _ 11 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 501 # text = We observed that FK506 suppressed the transcription of a chemotactic cytokine, interleukin-8 (IL-8) in a human T cell line, Jurkat cells, activated by phorbol 12-myristate 13-acetate (PMA) and calcium (Ca2+) ionophore (ionomycin). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 FK506 FK506 PROPN NNP Number=Sing _ _ _ _ 5 suppressed suppress VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 chemotactic chemotactic ADJ JJ Degree=Pos _ _ _ _ 11 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 8 8 NUM CD NumType=Card _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 8 8 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 T T PROPN NNP Number=Sing _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 34 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 myristate myristate NOUN NN Number=Sing _ _ _ _ 37 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 acetate acetate NOUN NN Number=Sing _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 calcium calcium NOUN NN Number=Sing _ _ _ _ 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 47 + + SYM SYM _ _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ _ 49 ionophore ionophore ADJ JJ Degree=Pos _ _ _ _ 50 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 51 ionomycin ionomycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 502 # text = By deleted and mutated analysis of the IL-8 promoters, the AP-1 and kappa B-like sites were identified as the responsive elements for PMA and ionomycin. 1 By by ADP IN _ _ _ _ _ 2 deleted delet VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 analysis analysis NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - SYM SYM _ _ _ _ SpaceAfter=No 10 8 8 NUM CD NumType=Card _ _ _ _ 11 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 like like SCONJ IN _ _ _ _ _ 22 sites site NOUN NNS Number=Plur _ _ _ _ 23 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 as as ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 28 elements element NOUN NNS Number=Plur _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 PMA PMA PROPN NNP Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 ionomycin ionomycin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 503 # text = FK506 suppressed the transcriptions through the AP-1 or kappa B-like sites induced by PMA plus Ca(2+)-mobilizing agents, but not those induced by Ca(2+)-independent stimuli. 1 FK506 FK506 PROPN NNP Number=Sing _ _ _ _ 2 suppressed suppress VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 transcriptions transcription NOUN NNS Number=Plur _ _ _ _ 5 through through ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 like like SCONJ IN _ _ _ _ _ 15 sites site NOUN NNS Number=Plur _ _ _ _ 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 PMA PMA PROPN NNP Number=Sing _ _ _ _ 19 plus plus CCONJ CC _ _ _ _ _ 20 Ca ca PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 +) +) SYM NFP _ _ _ _ SpaceAfter=No 24 - - SYM SYM _ _ _ _ SpaceAfter=No 25 mobilizing mobilizing ADJ JJ Degree=Pos _ _ _ _ 26 agents agent NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 but but CCONJ CC _ _ _ _ _ 29 not not ADV RB _ _ _ _ _ 30 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 31 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 Ca Ca PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 +) +) SYM NFP _ _ _ _ SpaceAfter=No 37 - - SYM SYM _ _ _ _ SpaceAfter=No 38 independent independent ADJ JJ Degree=Pos _ _ _ _ 39 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 504 # text = In gel retardation analysis, FK506 had little effect on the binding to the AP-1 site of PMA/ionomycin-induced nuclear factors, which were recognized with anti-JunD or c-Fos antibody. 1 In in ADP IN _ _ _ _ _ 2 gel gel NOUN NN Number=Sing _ _ _ _ 3 retardation retardation NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 FK506 FK506 NUM CD NumType=Card _ _ _ _ 7 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 little little ADJ JJ Degree=Pos _ _ _ _ 9 effect effect NOUN NN Number=Sing _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 PMA/ionomycin-induced PMA/ionomycin-induced ADJ JJ Degree=Pos _ _ _ _ 21 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 recognized recognize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 anti-JunD anti-jund NOUN NN Number=Sing _ _ _ _ 29 or or CCONJ CC _ _ _ _ _ 30 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 Fos Fos ADJ JJ Degree=Pos _ _ _ _ 33 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 505 # text = In contrast, FK506 or EGTA (Ca2+ chelator) similarly affected the formation of kappa B-like site binding complexes, which were not recognized by any antibodies against the human Rel family proteins (c-Rel, p65, p50, and p49). 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 FK506 FK506 NUM CD NumType=Card _ _ _ _ 5 or or CCONJ CC _ _ _ _ _ 6 EGTA EGTA PROPN NNP Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 + + SYM SYM _ _ _ _ _ 10 chelator chelator NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 similarly similarly ADV RB _ _ _ _ _ 13 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 formation formation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 like like ADJ JJ Degree=Pos _ _ _ _ 21 site site NOUN NN Number=Sing _ _ _ _ 22 binding binding VERB VBG VerbForm=Ger _ _ _ _ 23 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 which which PRON WDT PronType=Rel _ _ _ _ 26 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 not not PART RB _ _ _ _ _ 28 recognized recognize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 any any DET DT _ _ _ _ _ 31 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 32 against against ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 human human ADJ JJ Degree=Pos _ _ _ _ 35 Rel Rel NOUN NN Number=Sing _ _ _ _ 36 family family NOUN NN Number=Sing _ _ _ _ 37 proteins protein NOUN NNS Number=Plur _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 p49 p49 NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 506 # text = Furthermore, we confirmed the previous report that FK506 suppressed the PMA/ionomycin-induced activation through authentic kappa B site of immunoglobulin 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 confirmed confirm VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 previous previous ADJ JJ Degree=Pos _ _ _ _ 7 report report NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 FK506 FK506 PROPN NNP Number=Sing _ _ _ _ 10 suppressed suppress VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 PMA/ionomycin-induced PMA/ionomycin-induced ADJ JJ Degree=Pos _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 through through ADP IN _ _ _ _ _ 15 authentic authentic ADJ JJ Degree=Pos _ _ _ _ 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 immunoglobulin immunoglobulin NOUN NN Number=Sing _ _ _ _ # sent_id = 507 # text = (Ig) gene, to which NF-kappa B binding was also decreased by FK506, indicating that both IL-8 kappa B-like site and Ig kappa B site are FK506-sensitive in spite of the difference of binding factors. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 Ig ig PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 FK506 FK506 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 both both DET DT _ _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 8 8 NUM CD NumType=Card _ _ _ _ 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 like like ADJ JJ Degree=Pos _ _ _ _ 29 site site NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 Ig ig PROPN NNP Number=Sing _ _ _ _ 32 kappa kappa PROPN NNP Number=Sing _ _ _ _ 33 B B PROPN NNP Number=Sing _ _ _ _ 34 site site NOUN NN Number=Sing _ _ _ _ 35 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 36 FK506 FK506 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 spite spite NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 difference difference NOUN NN Number=Sing _ _ _ _ 44 of of SCONJ IN _ _ _ _ _ 45 binding bind VERB VBG VerbForm=Ger _ _ _ _ 46 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 508 # text = Our results indicate that not only the reported IL-2 NF-AT and NFIL-2A sites and Ig kappa B site, but also the IL-8 AP-1 and kappa B-like sites are terminals of FK506-sensitive pathway involving Ca2+ mobilization. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 not not ADV RB _ _ _ _ _ 6 only only ADV RB _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 reported report VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 AT at NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 NFIL Nfil NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 A a NOUN NN Number=Sing _ _ _ _ 20 sites site NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 Ig ig PROPN NNP Number=Sing _ _ _ _ 23 kappa kappa PROPN NNP Number=Sing _ _ _ _ 24 B B PROPN NNP Number=Sing _ _ _ _ 25 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 but but CCONJ CC _ _ _ _ _ 28 also also ADV RB _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 8 8 NUM CD NumType=Card _ _ _ _ 33 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - SYM SYM _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 kappa kappa NOUN NN Number=Sing _ _ _ _ 38 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT , _ _ _ _ SpaceAfter=No 40 like like SCONJ IN _ _ _ _ _ 41 sites site NOUN NNS Number=Plur _ _ _ _ 42 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 43 terminals terminal NOUN NNS Number=Plur _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 FK506 FK506 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 48 pathway pathway NOUN NN Number=Sing _ _ _ _ 49 involving involve VERB VBG VerbForm=Ger _ _ _ _ 50 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 51 + + SYM SYM _ _ _ _ _ 52 mobilization mobilization NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 509 # text = Document 003002182 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002182 003002182 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 510 # text = Interactions of a transcriptional activator in the env gene of the mouse mammary tumor virus with activation-dependent, T cell-specific transacting factors. 1 Interactions Interaction NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 activator activator NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 env env NOUN NN Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 mouse mouse NOUN NN Number=Sing _ _ _ _ 13 mammary mammary ADJ JJ Degree=Pos _ _ _ _ 14 tumor tumor NOUN NN Number=Sing _ _ _ _ 15 virus virus NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 transacting transacting NOUN NN Number=Sing _ _ _ _ 26 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 511 # text = The mouse mammary tumor virus env gene contains a transcriptional activator (META) that can control transcription of the adjacent long terminal repeat region. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mouse mouse NOUN NN Number=Sing _ _ _ _ 3 mammary mammary NOUN NN Number=Sing _ _ _ _ 4 tumor tumor NOUN NN Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 env env NOUN NN Number=Sing _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 activator activator NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 META META PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 can can AUX MD VerbForm=Fin _ _ _ _ 17 control control VERB VB VerbForm=Inf _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 22 long long ADJ JJ Degree=Pos _ _ _ _ 23 terminal terminal NOUN NN Number=Sing _ _ _ _ 24 repeat repeat NOUN NN Number=Sing _ _ _ _ 25 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 512 # text = Transcriptional control by META parallels that of several lymphokine genes, being specific to T cells, dependent on their activation, and inhibited by the immunosuppressive drug cyclosporine (CsA). 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 control control NOUN NN Number=Sing _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 META META PROPN NNP Number=Sing _ _ _ _ 5 parallels parallel NOUN NNS Number=Plur _ _ _ _ 6 that that ADV WRB PronType=Rel _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 several several ADJ JJ Degree=Pos _ _ _ _ 9 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 being be AUX VBG VerbForm=Ger _ _ _ _ 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 28 drug drug NOUN NN Number=Sing _ _ _ _ 29 cyclosporine cyclosporine NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 513 # text = DNase I footprinting indicated that nuclear factors from activated T lymphocytes bound a promoter-proximal site, META(P), and a promoter-distal site, META(D+), within the 400-base pair META region. 1 DNase DNase INTJ UH _ _ _ _ _ 2 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 3 footprinting footprint VERB VBG VerbForm=Ger _ _ _ _ 4 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 factors factor NOUN NNS Number=Plur _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 bound bound ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 17 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 META META PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 P P PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 distal distal ADJ JJ Degree=Pos _ _ _ _ 29 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 META META PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 D d PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 + + SYM SYM _ _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 within within ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 400 400 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 base base NOUN NN Number=Sing _ _ _ _ 42 pair pair NOUN NN Number=Sing _ _ _ _ 43 META Meof ADP IN Abbr=Yes _ _ _ _ 44 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 514 # text = Nuclear factors from unstimulated, but not from activated cells, bound a site, META(D-), adjacent to META(D+). 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 but but CCONJ CC _ _ _ _ _ 7 not not ADV RB _ _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 bound bound ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 META META PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 D d PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 META META PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 D D PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 +) +) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 515 # text = META(D+) directed transcription of a linked luciferase gene, and gel shift analysis revealed binding of inducible, CsA-sensitive T cell factors, in parallel with transfection results. 1 META META PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 D would PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 + + SYM SYM _ _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 gel gel NOUN NN Number=Sing _ _ _ _ 16 shift shift NOUN NN Number=Sing _ _ _ _ 17 analysis analysis NOUN NN Number=Sing _ _ _ _ 18 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 binding binding VERB VBG VerbForm=Ger _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 inducible inducible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 26 T t NOUN NN Number=Sing _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 parallel parallel NOUN NN Number=Sing _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 transfection transfection NOUN NN Number=Sing _ _ _ _ 34 results result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 516 # text = Authentic NFAT and NF-kappaB targets did not compete for the META(D+) binding factor(s). 1 Authentic authentic PROPN NNP Number=Sing _ _ _ _ 2 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 targets target NOUN NNS Number=Plur _ _ _ _ 8 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 compete compete VERB VB VerbForm=Inf _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 META METa NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 D d NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 + + SYM SYM _ _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 s s X AFX _ _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 517 # text = The SV40 core sequence competed for META(D+) binding factors, but META(D+) failed to compete for the complexes obtained with the SV40 probe. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 SV40 SV40 NUM CD NumType=Card _ _ _ _ 3 core core NOUN NN Number=Sing _ _ _ _ 4 sequence sequence NOUN NN Number=Sing _ _ _ _ 5 competed compet VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 META META PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 D D PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 + + SYM SYM _ _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 META META PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 D D PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 + + SYM SYM _ _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 compete compete VERB VB VerbForm=Inf _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 complexes complexe NOUN NNS Number=Plur _ _ _ _ 27 obtained obtaine VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 SV40 SV40 PROPN NNP Number=Sing _ _ _ _ 31 probe probe NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 518 # text = Our results, taken together, indicate that META(D+) is a novel transcriptional enhancer element that is similar in its cell-type specificity, activation dependence, and CsA sensitivity to the NFAT element. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 taken take VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 together together ADV RB _ _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 META META PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 D d PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 + + SYM SYM _ _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 novel novel NOUN NN Number=Sing _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 19 element element NOUN NN Number=Sing _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 similar similar ADJ JJ Degree=Pos _ _ _ _ 23 in in SCONJ IN _ _ _ _ _ 24 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 25 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 type type NOUN NN Number=Sing _ _ _ _ 29 specificity specificity NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 activation activation NOUN NN Number=Sing _ _ _ _ 32 dependence dependence NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 CsA csa DET DT Definite=Ind|PronType=Art _ _ _ _ 36 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 40 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 519 # text = It may be relevant to the role of MMTV in expression of Mls antigens or the induction of T cell lymphomas. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 may may AUX MD VerbForm=Fin _ _ _ _ 3 be be AUX VB VerbForm=Inf _ _ _ _ 4 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 MMTV MMTV PROPN NNP Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Mls Mls NOUN NNS Number=Plur _ _ _ _ 14 antigens antigen NOUN NNS Number=Plur _ _ _ _ 15 or or CCONJ CC _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 induction induction NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 lymphomas lymphoma NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 520 # text = Document 003002185 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002185 003002185 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 521 # text = Cytomegalovirus immediate early genes upregulate interleukin-6 gene expression. 1 Cytomegalovirus Cytomegalovirus PROPN NNP Number=Sing _ _ _ _ 2 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 3 early early ADJ JJ Degree=Pos _ _ _ _ 4 genes gene NOUN NNS Number=Plur _ _ _ _ 5 upregulate upregulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 6 6 NUM CD NumType=Card _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 522 # text = BACKGROUND: The immediate early genes (IE) of human cytomegalovirus (CMV) can be expressed in monocytic cells and are known to regulate viral and cellular genes. 1 BACKGROUND background ADP IN _ _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 The the DET DT Definite=Def|PronType=Art _ _ _ _ 4 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 5 early early ADJ JJ Degree=Pos _ _ _ _ 6 genes gene NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 IE ie PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 cytomegalovirus cytomegalovirus NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 CMV CMV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 can can AUX MD VerbForm=Fin _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 27 viral viral ADJ JJ Degree=Pos _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 30 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 523 # text = Interleukin-6 (IL-6) plays a central role in numerous inflammatory and immune processes. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 6 6 NUM CD NumType=Card _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 central central ADJ JJ Degree=Pos _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 numerous numerous ADJ JJ Degree=Pos _ _ _ _ 15 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 immune immune ADJ JJ Degree=Pos _ _ _ _ 18 processes process NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 524 # text = Interleukin-6 levels are increased in lung transplant patients clinically diagnosed with CMV pneumonitis. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 6 6 NUM CD NumType=Card _ _ _ _ 4 levels level NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 lung lung NOUN NN Number=Sing _ _ _ _ 9 transplant transplant NOUN NN Number=Sing _ _ _ _ 10 patients patient NOUN NNS Number=Plur _ _ _ _ 11 clinically clinically ADV RB _ _ _ _ _ 12 diagnosed diagnose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 CMV Cmv PROPN NNP Number=Sing _ _ _ _ 15 pneumonitis pneumonitis PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 525 # text = The regulation of IL-6 is dependent on various stimuli that include lipopolysaccharide (LPS), viruses, and other cytokines. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 6 6 NUM CD NumType=Card _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 various various ADJ JJ Degree=Pos _ _ _ _ 11 stimuli stimuli NOUN NNS Number=Plur _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 include include VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 LPS Lp NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 viruses viruse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 other other ADJ JJ Degree=Pos _ _ _ _ 23 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 526 # text = These studies examined the ability of CMV IE gene products to modulate IL-6 production. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 ability ability NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 CMV CMV PROPN NNP Number=Sing _ _ _ _ 8 IE ie PROPN NNP Number=Sing _ _ _ _ 9 gene gene ADJ JJ Degree=Pos _ _ _ _ 10 products product NOUN NNS Number=Plur _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 13 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 6 6 NUM CD NumType=Card _ _ _ _ 16 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 527 # text = METHODS: THP-1 cells, a monocytic cell line, were transfected with the CMV IE genes. 1 METHODS method NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 transfected transfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 CMV CMV PROPN NNP Number=Sing _ _ _ _ 18 IE ie PROPN NNP Number=Sing _ _ _ _ 19 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 528 # text = Interleukin-6 protein and IL-6 mRNA were measured in control and CMV immediate early transfected cells. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 6 6 NUM CD NumType=Card _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 6 6 NUM CD NumType=Card _ _ _ _ 9 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 measured measure VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 control control NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 CMV Cmv X GW _ _ _ _ _ 16 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 17 early early ADV RB Degree=Pos _ _ _ _ 18 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 529 # text = Cotransfection of CMV IE genes and IL-6 chloramphenicol acetyl transferase (CAT) or IL-6 luciferase constructs were used to study IL-6 promoter activity. 1 Cotransfection Cotransfection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 CMV CMV PROPN NNP Number=Sing _ _ _ _ 4 IE ie PROPN NNP Number=Sing _ _ _ _ 5 genes gene NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 6 6 NUM CD NumType=Card _ _ _ _ 10 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 11 acetyl acetyl NOUN NN Number=Sing _ _ _ _ 12 transferase transferase NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 CAT Cat NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 6 6 NUM CD NumType=Card _ _ _ _ 20 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 21 constructs construct NOUN NNS Number=Plur _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 study study VERB VB VerbForm=Inf _ _ _ _ 26 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 6 6 NUM CD NumType=Card _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ _ 30 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 530 # text = RESULTS: Interleukin-6 protein and mRNA production were significantly increased in cells transfected with the CMV IE genes and stimulated with LPS compared to LPS-stimulated control cells. 1 RESULTS result NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 6 6 NUM CD NumType=Card _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 9 production production NOUN NN Number=Sing _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 significantly significantly ADV RB _ _ _ _ _ 12 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 CMV CMV PROPN NNP Number=Sing _ _ _ _ 19 IE ie PROPN NNP Number=Sing _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 LPS Lp PROPN NNP Number=Sing _ _ _ _ 25 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 control control NOUN NN Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 531 # text = Cytomegalovirus 1 Cytomegalovirus Cytomegalovirus PROPN NNP Number=Sing _ _ _ _ # sent_id = 532 # text = IE gene products significantly enhanced LPS stimulation of IL-6 promoter activity in both IL-6 CAT and IL-6 luciferase assays. 1 IE ie ADJ JJ Degree=Pos _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 products product NOUN NNS Number=Plur _ _ _ _ 4 significantly significantly ADV RB _ _ _ _ _ 5 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 7 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 6 6 NUM CD NumType=Card _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 both both DET DT _ _ _ _ _ 16 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 6 6 NUM CD NumType=Card _ _ _ _ 19 CAT cat NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 6 6 NUM CD NumType=Card _ _ _ _ 24 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 25 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 533 # text = A deletion construct that contains a NF-kappa B site but is missing the multiple response region demonstrated a continued increase in IL-6 luciferase activity in LPS-stimulated CMV transfected cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 deletion deletion NOUN NN Number=Sing _ _ _ _ 3 construct construct NOUN NN Number=Sing _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 site site NOUN NN Number=Sing _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 missing miss VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 17 response response NOUN NN Number=Sing _ _ _ _ 18 region region NOUN NN Number=Sing _ _ _ _ 19 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 continued continu VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 increase increase NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 6 6 NUM CD NumType=Card _ _ _ _ 27 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 CMV haCmve NOUN NN Number=Sing _ _ _ _ 34 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 534 # text = CONCLUSION: Cytomegalovirus immediate early gene products significantly enhanced expression of IL-6 in LPS-stimulated cells. 1 CONCLUSION conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Cytomegalovirus Cytomegalovirus PROPN NNP Number=Sing _ _ _ _ 4 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 5 early early ADJ JJ Degree=Pos _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 products product NOUN NNS Number=Plur _ _ _ _ 8 significantly significantly ADV RB _ _ _ _ _ 9 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 6 6 NUM CD NumType=Card _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 535 # text = The increase in IL-6 luciferase activity occurs in the absence of the multiple response region, the area of the IL-6 promoter responsive to IL-1, TNF alpha, cyclic amp, and phorbol 12-myristate 13-acetate. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 increase increase NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 6 6 NUM CD NumType=Card _ _ _ _ 7 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 occurs occur NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 absence absence NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 16 response response NOUN NN Number=Sing _ _ _ _ 17 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 area area NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 6 6 NUM CD NumType=Card _ _ _ _ 26 promoter promoter NOUN NN Number=Sing _ _ _ _ 27 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 TNF TNF PROPN NNP Number=Sing _ _ _ _ 34 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 cyclic cyclic ADJ JJ Degree=Pos _ _ _ _ 37 amp amp NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 41 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 - - PUNCT : _ _ _ _ SpaceAfter=No 43 myristate myristate NOUN NN Number=Sing _ _ _ _ 44 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 - - PUNCT : _ _ _ _ SpaceAfter=No 46 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 536 # text = The ability of CMV IE gene products to enhance IL-6 production may play an important role in immune inflammatory states associated with CMV infection. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ability ability NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 CMV CMV PROPN NNP Number=Sing _ _ _ _ 5 IE ie PROPN NNP Number=Sing _ _ _ _ 6 gene gene ADJ JJ Degree=Pos _ _ _ _ 7 products product NOUN NNS Number=Plur _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 10 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 6 6 NUM CD NumType=Card _ _ _ _ 13 production production NOUN NN Number=Sing _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 play play VERB VB VerbForm=Inf _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 important important ADJ JJ Degree=Pos _ _ _ _ 18 role role NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 immune immune ADJ JJ Degree=Pos _ _ _ _ 21 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 22 states state NOUN NNS Number=Plur _ _ _ _ 23 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 CMV Cmv NOUN NN Number=Sing _ _ _ _ 26 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 537 # text = Document 003002187 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002187 003002187 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 538 # text = Costimulation requirement for AP-1 and NF-kappa B transcription factor activation in T cells. 1 Costimulation Costimulation NOUN NN Number=Sing _ _ _ _ 2 requirement requirement NOUN NN Number=Sing _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 539 # text = The transcriptional activity of the IL-2 promoter requires T-cell costimulation delivered by the TCR and the auxiliary receptor CD28. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 3 activity activity NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 requires require NOUN NNS Number=Plur _ _ _ _ 11 T- T- PUNCT : _ _ _ _ SpaceAfter=No 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 14 delivered deliver VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 TCR Tcr NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 auxiliary auxiliary ADJ JJ Degree=Pos _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ _ 22 CD28 Cd28 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 540 # text = Several transcription factors participate in IL-2 promoter activation, among which are AP-1-like factors and NF-kappa B. Protein phosphorylation has an important role in the regulation of these two factors: (1) it induces the transactivating capacity of the AP-1 protein c-Jun; and (2) it is involved in the release of the cytoplasmic inhibitor, I kappa B, from NF-kappa B, allowing translocation of the latter into the nucleus. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 participate participate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 among among ADP IN _ _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 like like ADP IN _ _ _ _ _ 20 factors factor NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ 27 Protein protein NOUN NN Number=Sing _ _ _ _ 28 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 29 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 important important ADJ JJ Degree=Pos _ _ _ _ 32 role role NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 regulation regulation NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 38 two two NUM CD NumType=Card _ _ _ _ 39 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 : : PUNCT : _ _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 1 1 X LS _ _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ _ 44 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 45 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 transactivating transactivat VERB VBG VerbForm=Ger _ _ _ _ 48 capacity capacity NOUN NN Number=Sing _ _ _ _ 49 of of ADP IN _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 1 1 NUM CD NumType=Card _ _ _ _ 54 protein protein NOUN NN Number=Sing _ _ _ _ 55 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 57 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 58 ; ; PUNCT , _ _ _ _ _ 59 and and CCONJ CC _ _ _ _ _ 60 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 61 2 2 X LS _ _ _ _ SpaceAfter=No 62 ) ) PUNCT -RRB- _ _ _ _ _ 63 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 64 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 65 involved involved ADJ JJ Degree=Pos _ _ _ _ 66 in in ADP IN _ _ _ _ _ 67 the the DET DT Definite=Def|PronType=Art _ _ _ _ 68 release release NOUN NN Number=Sing _ _ _ _ 69 of of ADP IN _ _ _ _ _ 70 the the DET DT Definite=Def|PronType=Art _ _ _ _ 71 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 72 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 73 , , PUNCT , _ _ _ _ _ 74 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 75 kappa kappa PROPN NNP Number=Sing _ _ _ _ 76 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 77 , , PUNCT , _ _ _ _ _ 78 from from ADP IN _ _ _ _ _ 79 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 80 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 81 kappa kappa NOUN NN Number=Sing _ _ _ _ 82 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 83 , , PUNCT , _ _ _ _ _ 84 allowing allow VERB VBG VerbForm=Ger _ _ _ _ 85 translocation translocation NOUN NN Number=Sing _ _ _ _ 86 of of ADP IN _ _ _ _ _ 87 the the DET DT Definite=Def|PronType=Art _ _ _ _ 88 latter latter ADJ JJ Degree=Pos _ _ _ _ 89 into into ADP IN _ _ _ _ _ 90 the the DET DT Definite=Def|PronType=Art _ _ _ _ 91 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 92 . . PUNCT . _ _ _ _ _ # sent_id = 541 # text = We have recently shown that both phosphorylation processes require T-cell costimulation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 recently recently ADV RB _ _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 both both DET DT _ _ _ _ _ 7 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 8 processes process NOUN NNS Number=Plur _ _ _ _ 9 require require VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 costimulation costimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 542 # text = Furthermore, in activated T cells, the kinetics of the two phosphorylation events are essentially similar. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 two two NUM CD NumType=Card _ _ _ _ 13 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 14 events event NOUN NNS Number=Plur _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 essentially essentially ADV RB _ _ _ _ _ 17 similar similar ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 543 # text = According to our results, however, the kinases responsible for the two processes are distinct entities. 1 According accord VERB VBG VerbForm=Ger _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 however however ADV RB _ _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 kinases kinase NOUN NNS Number=Plur _ _ _ _ 10 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 two two NUM CD NumType=Card _ _ _ _ 14 processes process NOUN NNS Number=Plur _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 17 entities entity NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 544 # text = Whereas TPCK inhibits phosphorylation of I kappa B and, consequently, activation of NF-kappa B, it markedly enhances the activity of JNK, the MAP kinase-related kinase that phosphorylates the transactivation domain of c-Jun. 1 Whereas whereas SCONJ IN _ _ _ _ _ 2 TPCK TPCK PROPN NNP Number=Sing _ _ _ _ 3 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B B PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 consequently consequently ADV RB _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 21 markedly markedly ADV RB _ _ _ _ _ 22 enhances enhance VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 JNK JNK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 MAP map PROPN NNP Number=Sing _ _ _ _ 30 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 related related ADJ JJ Degree=Pos _ _ _ _ 33 kinase kinase NOUN NN Number=Sing _ _ _ _ 34 that that PRON WDT PronType=Rel _ _ _ _ 35 phosphorylates phosphorylate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 38 domain domain NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 545 # text = We, therefore, propose the activation scheme presented in FIGURE 3 for T-cell costimulation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 therefore therefore ADV RB _ _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 propose propose VERB VB VerbForm=Inf _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 scheme scheme NOUN NN Number=Sing _ _ _ _ 9 presented present VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 FIGURE figure PROPN NNP Number=Sing _ _ _ _ 12 3 3 NUM CD NumType=Card _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 costimulation costimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 546 # text = Costimulation results in the activation of a signaling pathway that leads to the simultaneous induction of the two transcription factors, AP-1 and NF-kappa B. 1 Costimulation Costimulation NOUN NN Number=Sing _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 signaling signal NOUN NN Number=Sing _ _ _ _ 9 pathway pathway NOUN NN Number=Sing _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 simultaneous simultaneous ADJ JJ Degree=Pos _ _ _ _ 15 induction induction NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 two two NUM CD NumType=Card _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 547 # text = Integration of the signals generated by TCR and CD28 engagement occurs along this pathway, which then bifurcates to induce I kappa B phosphorylation and NF-kappa B activation on the one hand, and JNK activation and c-Jun phosphorylation on the other. 1 Integration Integration NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 signals signal NOUN NNS Number=Plur _ _ _ _ 5 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 TCR TCR PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 10 engagement engagement NOUN NN Number=Sing _ _ _ _ 11 occurs occur NOUN NNS Number=Plur _ _ _ _ 12 along along ADP IN _ _ _ _ _ 13 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 14 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 then then ADV RB PronType=Dem _ _ _ _ 18 bifurcates bifurcate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 induce induce VERB VB VerbForm=Inf _ _ _ _ 21 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 22 kappa kappa X FW Foreign=Yes _ _ _ _ 23 B b ADJ JJ Degree=Pos _ _ _ _ 24 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ _ 31 on on ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 one one NUM CD NumType=Card _ _ _ _ 34 hand hand NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 JNK JNK PROPN NNP Number=Sing _ _ _ _ 38 activation activation NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 Jun Jun PROPN NNP Number=Sing _ _ _ _ 43 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 44 on on ADP IN _ _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 other other ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 548 # text = We are currently engaged in defining where the two signals integrate along the AP-1/NF-kappa B pathway. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 currently currently ADV RB _ _ _ _ _ 4 engaged engage VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in SCONJ IN _ _ _ _ _ 6 defining define VERB VBG VerbForm=Ger _ _ _ _ 7 where where ADV WRB PronType=Int _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 two two NUM CD NumType=Card _ _ _ _ 10 signals signal NOUN NNS Number=Plur _ _ _ _ 11 integrate integrate ADJ JJ Degree=Pos _ _ _ _ 12 along along ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1/ 1ith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 17 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 549 # text = Document 003002190 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002190 003002190 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 550 # text = The Epstein-Barr virus oncogene product latent membrane protein 1 engages the tumor necrosis factor receptor-associated death domain protein to mediate B lymphocyte growth transformation and activate NF-kappaB. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 Barr Barr PROPN NNP Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 oncogene oncogene NOUN NN Number=Sing _ _ _ _ 7 product product NOUN NN Number=Sing _ _ _ _ 8 latent latent ADJ JJ Degree=Pos _ _ _ _ 9 membrane membrane NOUN NN Number=Sing _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 1 1 NUM CD NumType=Card _ _ _ _ 12 engages engage VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 tumor tumor NOUN NN Number=Sing _ _ _ _ 15 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 death death NOUN NN Number=Sing _ _ _ _ 21 domain domain NOUN NN Number=Sing _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ _ 26 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 27 growth growth NOUN NN Number=Sing _ _ _ _ 28 transformation transformation NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 activate activate VERB VB VerbForm=Inf _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 551 # text = The Epstein-Barr virus latent membrane protein 1 (LMP1) is essential for the transformation of B lymphocytes into lymphoblastoid cell lines. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 Barr Barr PROPN NNP Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 latent latent ADJ JJ Degree=Pos _ _ _ _ 7 membrane membrane NOUN NN Number=Sing _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 1 1 NUM CD NumType=Card _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 LMP1 Lmp1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 essential essential ADJ JJ Degree=Pos _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 transformation transformation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 B b ADJ JJ Degree=Pos _ _ _ _ 20 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 21 into into ADP IN _ _ _ _ _ 22 lymphoblastoid lymphoblastoid ADJ JJ Degree=Pos _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 552 # text = Previous data are consistent with a model that LMP1 is a constitutively activated receptor that transduces signals for transformation through its carboxyl-terminal cytoplasmic tail. 1 Previous previous ADJ JJ Degree=Pos _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 model model NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 constitutively constitutively ADV RB _ _ _ _ _ 13 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 transduces transduce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 signals signal NOUN NNS Number=Plur _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 transformation transformation NOUN NN Number=Sing _ _ _ _ 20 through through ADP IN _ _ _ _ _ 21 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 22 carboxyl carboxyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 25 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 26 tail tail NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 553 # text = One transformation effector site (TES1), located within the membrane proximal 45 residues of the cytoplasmic tail, constitutively engages tumor necrosis factor receptor-associated factors. 1 One one NUM CD NumType=Card _ _ _ _ 2 transformation transformation NOUN NN Number=Sing _ _ _ _ 3 effector effector NOUN NN Number=Sing _ _ _ _ 4 site site NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 TES1 TES1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 within within ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 membrane membrane NOUN NN Number=Sing _ _ _ _ 13 proximal proximal NOUN NN Number=Sing _ _ _ _ 14 45 45 NUM CD NumType=Card _ _ _ _ 15 residues residue NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 19 tail tail NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 constitutively constitutively ADV RB _ _ _ _ _ 22 engages engage NOUN NNS Number=Plur _ _ _ _ 23 tumor tumor ADP IN _ _ _ _ _ 24 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 554 # text = Signals from TES1 are sufficient to drive initial proliferation of infected resting B lymphocytes, but most lymphoblastoid cells infected with a virus that does not express the 155 residues beyond TES1 fail to grow as long-term cell lines. 1 Signals signal NOUN NNS Number=Plur _ _ _ _ 2 from from ADP IN _ _ _ _ _ 3 TES1 tES1 NOUN NN Number=Sing _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 drive drive VERB VB VerbForm=Inf _ _ _ _ 8 initial initial ADJ JJ Degree=Pos _ _ _ _ 9 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 resting reste VERB VBG VerbForm=Ger _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 most most ADV RBS _ _ _ _ _ 18 lymphoblastoid lymphoblastoid ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 virus virus NOUN NN Number=Sing _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 not not PART RB _ _ _ _ _ 27 express express VERB VB VerbForm=Inf _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 155 155 NUM CD NumType=Card _ _ _ _ 30 residues residue NOUN NNS Number=Plur _ _ _ _ 31 beyond beyond ADP IN _ _ _ _ _ 32 TES1 TES1 NUM CD NumType=Card _ _ _ _ 33 fail fail NOUN NN Number=Sing _ _ _ _ 34 to to PART TO _ _ _ _ _ 35 grow grow VERB VB VerbForm=Inf _ _ _ _ 36 as as ADP IN _ _ _ _ _ 37 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 term term NOUN NN Number=Sing _ _ _ _ 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 555 # text = We now find that mutating two tyrosines to an isoleucine at the carboxyl end of the cytoplasmic tail cripples the ability of EBV to cause lymphoblastoid cell outgrowth, thereby marking a second transformation effector site, TES2. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 now now ADV RB _ _ _ _ _ 3 find find VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 mutating mutat VERB VBG VerbForm=Ger _ _ _ _ 6 two two NUM CD NumType=Card _ _ _ _ 7 tyrosines tyrosine NOUN NNS Number=Plur _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 isoleucine isoleucine NOUN NN Number=Sing _ _ _ _ 11 at at ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 carboxyl carboxyl NOUN NN Number=Sing _ _ _ _ 14 end end NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 18 tail tail NOUN NN Number=Sing _ _ _ _ 19 cripples cripple NOUN NNS Number=Plur _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 ability ability NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 EBV EBV PROPN NNP Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 cause cause VERB VB VerbForm=Inf _ _ _ _ 26 lymphoblastoid lymphoblastoid NOUN NN Number=Sing _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 outgrowth outgrowth ADV RB _ _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 thereby thereby ADV RB _ _ _ _ _ 31 marking mark VERB VBG VerbForm=Ger _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 34 transformation transformation NOUN NN Number=Sing _ _ _ _ 35 effector effector NOUN NN Number=Sing _ _ _ _ 36 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 TES2 TES2 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 556 # text = A yeast two-hybrid screen identified TES2 interacting proteins, including the tumor necrosis factor receptor-associated death domain protein (TRADD). 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 yeast yeast ADJ JJS Degree=Sup _ _ _ _ 3 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 hybrid hybrid NOUN NN Number=Sing _ _ _ _ 6 screen screen NOUN NN Number=Sing _ _ _ _ 7 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 TES2 TES2 NUM CD NumType=Card _ _ _ _ 9 interacting interact VERB VBG VerbForm=Ger _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 including include VERB VBG VerbForm=Ger _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 tumor tumor NOUN NN Number=Sing _ _ _ _ 15 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 death death NOUN NN Number=Sing _ _ _ _ 21 domain domain NOUN NN Number=Sing _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 TRADD TRADD NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 557 # text = TRADD was the only protein that interacted with wild-type TES2 and not with isoleucine-mutated TES2. 1 TRADD tRADd NOUN NN Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 only only ADJ JJ Degree=Pos _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 interacted interact VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 type type NOUN NN Number=Sing _ _ _ _ 12 TES2 Tes2 NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 not not ADV RB _ _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 isoleucine isoleucine NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 TES2 Tes2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 558 # text = TRADD associated with wild-type LMP1 but not with isoleucine-mutated LMP1 in mammalian cells, and TRADD constitutively associated with LMP1 in EBV-transformed cells. 1 TRADD Tradd NOUN NN Number=Sing _ _ _ _ 2 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 type type NOUN NN Number=Sing _ _ _ _ 7 LMP1 Lmp1 NOUN NN Number=Sing _ _ _ _ 8 but but CCONJ CC _ _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 isoleucine-mutated isoleucine-mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 LMP1 Lmp1 NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 TRADD TRADD PROPN NNP Number=Sing _ _ _ _ 19 constitutively constitutively ADV RB _ _ _ _ _ 20 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 559 # text = In transfection assays, TRADD and TES2 synergistically mediated high-level NF-kappaB activation. 1 In in ADP IN _ _ _ _ _ 2 transfection transfection NOUN NN Number=Sing _ _ _ _ 3 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 TRADD Tradd PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 TES2 TES2 NUM CD NumType=Card _ _ _ _ 8 synergistically synergistically ADV RB _ _ _ _ _ 9 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 level level NOUN NN Number=Sing _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 560 # text = These results indicate that LMP1 appropriates TRADD to enable efficient long-term lymphoblastoid cell outgrowth. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ _ 6 appropriates appropriate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 TRADD TRADD PROPN NNP Number=Sing _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 enable enable VERB VB VerbForm=Inf _ _ _ _ 10 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 11 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 term term NOUN NN Number=Sing _ _ _ _ 14 lymphoblastoid lymphoblastoid NOUN NN Number=Sing _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 outgrowth outgrowth NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 561 # text = High-level NF-kappaB activation also appears to be a critical component of long-term outgrowth. 1 High high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 level level NOUN NN Number=Sing _ _ _ _ 4 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappab PROPN NNP Number=Sing _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 also also ADV RB _ _ _ _ _ 9 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 critical critical ADJ JJ Degree=Pos _ _ _ _ 14 component component NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 term term NOUN NN Number=Sing _ _ _ _ 19 outgrowth outgrowth NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 562 # text = Document 003002194 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002194 003002194 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 563 # text = Antisense oligonucleotides to the p65 subunit of NF-kappa B block CD11b expression and alter adhesion properties of differentiated HL-60 granulocytes. 1 Antisense Antisense ADJ JJ Degree=Pos _ _ _ _ 2 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 p65 p65 NOUN NN Number=Sing _ _ _ _ 6 subunit subunit NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 block block NOUN NN Number=Sing _ _ _ _ 13 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 11 11 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 b b NOUN NN Number=Sing _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 alter alter NOUN NN Number=Sing _ _ _ _ 19 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 20 properties property NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 HL HL NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 60 60 NUM CD NumType=Card _ _ _ _ 26 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 564 # text = NF-kappa B is a pleiotropic regulator of a variety of genes implicated in the cellular response to injury. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 pleiotropic pleiotropic ADJ JJ Degree=Pos _ _ _ _ 8 regulator regulator NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 variety variety NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 implicated implicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 18 response response NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 injury injury NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 565 # text = This function has been attributed to the coordinated binding of subunits of NF-kappa B to distinct regions of the promoter elements of numerous genes, including cytokines, growth factor receptors, and adhesion molecules. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 function function NOUN NN Number=Sing _ _ _ _ 3 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 attributed attribute VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 coordinated coordinate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 binding binding NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 subunits subunit NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 19 regions region NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ _ 23 elements element NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 numerous numerous ADJ JJ Degree=Pos _ _ _ _ 26 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 including include VERB VBG VerbForm=Ger _ _ _ _ 29 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 growth growth NOUN NN Number=Sing _ _ _ _ 32 factor factor NOUN NN Number=Sing _ _ _ _ 33 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 37 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 566 # text = Antisense phosphorothioate oligonucleotides to the p50 and p65 subunits of the NF-kappa B complex were used to define the physiologic role of this transcription factor in resting and stimulated granulocytes. 1 Antisense Antisense ADJ JJ Degree=Pos _ _ _ _ 2 phosphorothioate phosphorothioate NOUN NN Number=Sing _ _ _ _ 3 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 p50 p50 NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 p65 p65 NUM CD NumType=Card _ _ _ _ 9 subunits subunit NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa PROPN NNP Number=Sing _ _ _ _ 15 B b PROPN NNP Number=Sing _ _ _ _ 16 complex complex NOUN NN Number=Sing _ _ _ _ 17 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 define define VERB VB VerbForm=Inf _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 physiologic physiologic NOUN NN Number=Sing _ _ _ _ 23 role role NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ _ 28 in in SCONJ IN _ _ _ _ _ 29 resting reste VERB VBG VerbForm=Ger _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 567 # text = A reduction in the expression of p65 was produced by treatment with the phosphorothioate antisense oligodeoxynucleotide. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 reduction reduction NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 p65 p65 NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 produced produce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 treatment treatment NOUN NN Number=Sing _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 phosphorothioate phosphorothioate NOUN NN Number=Sing _ _ _ _ 15 antisense antisense NOUN NN Number=Sing _ _ _ _ 16 oligodeoxynucleotide oligodeoxynucleotide ADV RB _ _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 568 # text = This reduction was accompanied by rapid changes in the cellular adhesion of dimethyl sulfoxide-differentiated HL-60 leukemia cells stimulated by 12-O-tetradecanoylphorbol 13-acetate (TPA). 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 reduction reduction NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 7 changes change NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 11 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 dimethyl dimethyl NOUN NN Number=Sing _ _ _ _ 14 sulfoxide sulfoxide NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 HL Hl NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 60 60 NUM CD NumType=Card _ _ _ _ 20 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 O of ADP IN Abbr=Yes _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 tetradecanoylphorbol tetradecanoylphorbol NOUN NN Number=Sing _ _ _ _ 29 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 acetate acetate NOUN NN Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 569 # text = These effects were characterized by a marked reduction in CD11b integrin expression on the surface of treated cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 characterized characterize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 reduction reduction NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 11 11 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 b benefit NOUN NN Number=Sing _ _ _ _ 13 integrin integrin ADP IN _ _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 surface surface NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 570 # text = Furthermore, the p65 antisense oligomer effectively abolished an upregulation of CD11b that was produced by formyl-met-leu-phe and TPA. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 p65 p65 NOUN NN Number=Sing _ _ _ _ 5 antisense antisense NOUN NN Number=Sing _ _ _ _ 6 oligomer oligomer NOUN NN Number=Sing _ _ _ _ 7 effectively effectively ADV RB _ _ _ _ _ 8 abolished abolish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 11 11 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 b b NOUN NN Number=Sing _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 produced produce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 formyl formyl ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 met meet VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 leu leu NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 phe phe NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 TPA TPa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 571 # text = However, the p65 antisense phosphorothioate oligodeoxynucleotide had no significant effect on the production of reactive oxygen intermediates or on phagocytosis by these cells. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 p65 p65 NOUN NN Number=Sing _ _ _ _ 5 antisense antisense NOUN NN Number=Sing _ _ _ _ 6 phosphorothioate phosphorothioate NOUN NN Number=Sing _ _ _ _ 7 oligodeoxynucleotide oligodeoxynucleotide ADV RB _ _ _ _ _ 8 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 no no DET DT _ _ _ _ _ 10 significant significant ADJ JJ Degree=Pos _ _ _ _ 11 effect effect NOUN NN Number=Sing _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 production production NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 17 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 18 intermediates intermediate NOUN NNS Number=Plur _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 on on ADP IN _ _ _ _ _ 21 phagocytosis phagocytosis NOUN NN Number=Sing _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 572 # text = These findings indicate that antisense oligomers to p65 can be used to define the role of NF-kappa B in the activation pathways of neutrophils. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 antisense antisense ADJ JJ Degree=Pos _ _ _ _ 6 oligomers oligomer NOUN NNS Number=Plur _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 p65 p65 NOUN NN Number=Sing _ _ _ _ 9 can can AUX MD VerbForm=Fin _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 define define VERB VB VerbForm=Inf _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 role role NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 pathways pathway NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 573 # text = Document 003002196 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002196 003002196 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 574 # text = ETS transcription factors regulate an enhancer activity in the third intron of TNF-alpha. 1 ETS ets NOUN NN Number=Sing _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 third third ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 11 intron intron NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 575 # text = We describe an enhancer site in the third intron of tumor necrosis factor alpha (TNF-alpha). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 describe describe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 5 site site NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 third third ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 9 intron intron NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 tumor tumor NOUN NN Number=Sing _ _ _ _ 12 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 alpha alpha NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 576 # text = A reporter construct containing the 5'-flanking region of the mouse TNF-alpha gene displayed weak activity when transfected into RAW264.7 macrophage-like cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 reporter reporter NOUN NN Number=Sing _ _ _ _ 3 construct construct NOUN NN Number=Sing _ _ _ _ 4 containing contain VERB VBG VerbForm=Ger _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 10 region region NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 mouse mouse NOUN NN Number=Sing _ _ _ _ 14 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 displayed display VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 weak weak ADJ JJ Degree=Pos _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 when when ADV WRB PronType=Int _ _ _ _ 22 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 into into ADP IN _ _ _ _ _ 24 RAW RAW PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 264.7 264.7 NUM CD NumType=Card _ _ _ _ 26 macrophage macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 like like ADJ JJ Degree=Pos _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 577 # text = The addition of the third intron of TNF-alpha to this construct resulted in an enhancement of CAT protein. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 third third ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 6 intron intron NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 13 construct construct NOUN NN Number=Sing _ _ _ _ 14 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 CAT Cat NOUN NN Number=Sing _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 578 # text = This enhancement was eliminated if a conserved 20-bp sequence was removed from the intron or if a dominant-negative ets-binding factor was co-transfected with the reporter gene. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 eliminated eliminate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 if if SCONJ IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 bp bp NOUN NN Number=Sing _ _ _ _ 11 sequence sequence NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 removed remove VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 intron intron NOUN NN Number=Sing _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 if if SCONJ IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 dominant dominant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 negative negative ADJ JJ Degree=Pos _ _ _ _ 23 ets et NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 binding bind VERB VBG VerbForm=Ger _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ _ 27 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 28 co-transfected co-transfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 reporter reporter NOUN NN Number=Sing _ _ _ _ 32 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 579 # text = Mutations of this site that destroyed potential ets transcription factor binding sites had reduced transcriptional activity. 1 Mutations Mutation NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 site site NOUN NN Number=Sing _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 destroyed destroy VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 potential potential ADJ JJ Degree=Pos _ _ _ _ 8 ets et NOUN NNS Number=Plur _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 sites site NOUN NNS Number=Plur _ _ _ _ 13 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 580 # text = The major transcription factor that bound to the oligonucleotide was confirmed to be GABP by supershift and competition analysis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 major major ADJ JJ Degree=Pos _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 bound bound VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 oligonucleotide oligonucleotide NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 confirmed confirm VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 GABP GABP PROPN NNP Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 supershift supershift NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 competition competition NOUN NN Number=Sing _ _ _ _ 19 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 581 # text = In RAW264.7 cells, the binding was constitutive, however, in bone marrow-derived macrophages binding activity was shown to be interferon-gamma inducible. 1 In in ADP IN _ _ _ _ _ 2 RAW RAW PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 264.7 264.7 NUM CD NumType=Card _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 binding binding NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 constitutive constitutive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 however however ADV RB _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 bone bone ADJ JJ Degree=Pos _ _ _ _ 15 marrow marrow NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 be be AUX VB VerbForm=Inf _ _ _ _ 25 interferon interferon ADP IN _ _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 gamma gamma NOUN NN Number=Sing _ _ _ _ 28 inducible inducible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 582 # text = This may imply a role for ets transcription factors in the production of TNF-alpha. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 may may AUX MD VerbForm=Fin _ _ _ _ 3 imply imply VERB VB VerbForm=Inf _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 ets et NOUN NNS Number=Plur _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factors factor NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 production production NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 583 # text = Document 003002199 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002199 003002199 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 584 # text = Xenogeneic human serum promotes leukocyte adhesion to porcine endothelium under flow conditions, possibly through the activation of the transcription factor NF-kappa B. 1 Xenogeneic Xenogeneic ADJ JJ Degree=Pos _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 serum serum NOUN NN Number=Sing _ _ _ _ 4 promotes promote VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 leukocyte leukocyte ADJ JJ Degree=Pos _ _ _ _ 6 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 porcine porcine VERB VB VerbForm=Inf _ _ _ _ 9 endothelium endothelium NOUN NN Number=Sing _ _ _ _ 10 under under ADP IN _ _ _ _ _ 11 flow flow NOUN NN Number=Sing _ _ _ _ 12 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 possibly possibly ADV RB _ _ _ _ _ 15 through through ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 585 # text = Endothelial cell activation and leukocyte infiltration are a consistent feature of discordant xenograft rejection. 1 Endothelial Endothelial ADJ JJ Degree=Pos _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 6 infiltration infiltration NOUN NN Number=Sing _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 10 feature feature NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 discordant discordant ADJ JJ Degree=Pos _ _ _ _ 13 xenograft xenograft NOUN NN Number=Sing _ _ _ _ 14 rejection rejection NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 586 # text = Here we evaluated whether xenogeneic serum, as a source of xenoreactive natural antibodies and complement, induced endothelial cell activation with consequent leukocyte adhesion under flow conditions. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 evaluated evaluate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 whether whether SCONJ IN _ _ _ _ _ 5 xenogeneic xenogeneic ADJ JJ Degree=Pos _ _ _ _ 6 serum serum NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 source source NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 xenoreactive xenoreactive ADJ JJ Degree=Pos _ _ _ _ 13 natural natural ADJ JJ Degree=Pos _ _ _ _ 14 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 complement complement NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 consequent consequent ADJ JJ Degree=Pos _ _ _ _ 24 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 25 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 26 under under ADP IN _ _ _ _ _ 27 flow flow ADJ JJ Degree=Pos _ _ _ _ 28 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 587 # text = Porcine aortic endothelial cells (PAEC) were incubated for 1 hr 30 min or 5 hr with 10% homologous porcine serum (control) or 10% xenogeneic human serum and then perfused with total human leukocytes in a parallel plate flow chamber under laminar flow (1.5 dynes/cm2). 1 Porcine Porcine PROPN NNP Number=Sing _ _ _ _ 2 aortic aortic ADJ JJ Degree=Pos _ _ _ _ 3 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 PAEC PAEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 incubated incubate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 1 1 NUM CD NumType=Card _ _ _ _ 12 hr hr NOUN NN Number=Sing _ _ _ _ 13 30 30 NUM CD NumType=Card _ _ _ _ 14 min min NOUN NNS Number=Plur _ _ _ _ 15 or or CCONJ CC _ _ _ _ _ 16 5 5 NUM CD NumType=Card _ _ _ _ 17 hr hr NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 % % SYM NN Number=Sing _ _ _ _ 21 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 22 porcine porcine NOUN NN Number=Sing _ _ _ _ 23 serum serum NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 control control NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 % % SYM NN Number=Sing _ _ _ _ 30 xenogeneic xenogeneic ADJ JJ Degree=Pos _ _ _ _ 31 human human ADJ JJ Degree=Pos _ _ _ _ 32 serum serum NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 then then ADV RB PronType=Dem _ _ _ _ 35 perfused perfuse VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 total total ADJ JJ Degree=Pos _ _ _ _ 38 human human ADJ JJ Degree=Pos _ _ _ _ 39 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 parallel parallel ADJ JJ Degree=Pos _ _ _ _ 43 plate plate NOUN NN Number=Sing _ _ _ _ 44 flow flow NOUN NN Number=Sing _ _ _ _ 45 chamber chamber NOUN NN Number=Sing _ _ _ _ 46 under under ADP IN _ _ _ _ _ 47 laminar laminar ADJ JJ Degree=Pos _ _ _ _ 48 flow flow NOUN NN Number=Sing _ _ _ _ 49 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 50 1.5 1.5 NUM CD NumType=Card _ _ _ _ 51 dynes dyne NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 / / SYM SYM _ _ _ _ SpaceAfter=No 53 cm2 cm2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 588 # text = Adherent cells were counted by digital image analysis. 1 Adherent adherent ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 counted count VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 digital digital ADJ JJ Degree=Pos _ _ _ _ 7 image image NOUN NN Number=Sing _ _ _ _ 8 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 589 # text = Xenogeneic human serum significantly (P < 0.01) increased the number of adherent leukocytes as compared with porcine serum. 1 Xenogeneic Xenogeneic ADJ JJ Degree=Pos _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 serum serum NOUN NN Number=Sing _ _ _ _ 4 significantly significantly ADV RB _ _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 P p NOUN NN Number=Sing _ _ _ _ 7 < < PUNCT -LRB- _ _ _ _ _ 8 0.01 0.01 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 number number NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 adherent adherent ADJ JJ Degree=Pos _ _ _ _ 15 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 16 as as SCONJ IN _ _ _ _ _ 17 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 porcine porcine NOUN NN Number=Sing _ _ _ _ 20 serum serum NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 590 # text = A similar adhesive response was elicited by TNF alpha (100 U/ml), one of the most potent inducers of endothelial cell adhesive properties, here used as positive control. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 similar similar ADJ JJ Degree=Pos _ _ _ _ 3 adhesive adhesive ADJ JJ Degree=Pos _ _ _ _ 4 response response NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 elicited elicit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 TNF TNF PROPN NNP Number=Sing _ _ _ _ 9 alpha alpha PROPN NNP Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 100 100 NUM CD NumType=Card _ _ _ _ 12 U/ U/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ml ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 one one NUM CD NumType=Card _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 most most ADV RBS _ _ _ _ _ 20 potent potent ADJ JJ Degree=Pos _ _ _ _ 21 inducers inducer NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 adhesive adhesive ADJ JJ Degree=Pos _ _ _ _ 26 properties property NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 here here ADV RB PronType=Dem _ _ _ _ 29 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 as as ADP IN _ _ _ _ _ 31 positive positive ADJ JJ Degree=Pos _ _ _ _ 32 control control NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 591 # text = In order to elucidate possible mechanisms underlying endothelial cell activation by xenogeneic serum, we focussed on transcription factor NF-kappa B, a central regulator for the induction of different genes, including adhesive molecules and chemoattractants. 1 In in ADP IN _ _ _ _ _ 2 order order NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 elucidate elucidate VERB VB VerbForm=Inf _ _ _ _ 5 possible possible ADJ JJ Degree=Pos _ _ _ _ 6 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 7 underlying underly VERB VBG VerbForm=Ger _ _ _ _ 8 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 xenogeneic xenogeneic ADJ JJ Degree=Pos _ _ _ _ 13 serum serum NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 16 focussed focuss VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappa kappa PROPN NNP Number=Sing _ _ _ _ 23 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 central central ADJ JJ Degree=Pos _ _ _ _ 27 regulator regulator NOUN NN Number=Sing _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 induction induction NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 different different ADJ JJ Degree=Pos _ _ _ _ 33 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 including include VERB VBG VerbForm=Ger _ _ _ _ 36 adhesive adhesive ADJ JJ Degree=Pos _ _ _ _ 37 molecules molecule NOUN NNS Number=Plur _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 chemoattractants chemoattractant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 592 # text = By confocal fluorescence microscopy, we observed a positive staining for NF-kappa B (p65 subunit) in the nuclei of PAEC exposed for 1 hr 30 min to human serum, which indicated NF-kappa B activation in this setting. 1 By by ADP IN _ _ _ _ _ 2 confocal confocal ADJ JJ Degree=Pos _ _ _ _ 3 fluorescence fluorescence NOUN NN Number=Sing _ _ _ _ 4 microscopy microscopy NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 positive positive ADJ JJ Degree=Pos _ _ _ _ 10 staining staining NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 p65 p65 NUM CD NumType=Card _ _ _ _ 18 subunit subunit NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 PAEC PAEC PROPN NNP Number=Sing _ _ _ _ 25 exposed expose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 1 1 NUM CD NumType=Card _ _ _ _ 28 hr hr NOUN NN Number=Sing _ _ _ _ 29 30 30 NUM CD NumType=Card _ _ _ _ 30 min min NOUN NNS Number=Plur _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 human human ADJ JJ Degree=Pos _ _ _ _ 33 serum serum NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 which which PRON WDT PronType=Rel _ _ _ _ 36 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 37 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 kappa kappa NOUN NN Number=Sing _ _ _ _ 40 B b NOUN NN Number=Sing _ _ _ _ 41 activation activation NOUN NN Number=Sing _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 44 setting setting NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 593 # text = At variance, in PAEC incubated with the homologous serum, NF-kappa B was strictly localized in the cell cytoplasm. 1 At at ADP IN _ _ _ _ _ 2 variance variance NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 PAEC PAEC PROPN NNP Number=Sing _ _ _ _ 6 incubated incubate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 10 serum serum NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa PROPN NNP Number=Sing _ _ _ _ 15 B b PROPN NNP Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 strictly strictly ADV RB _ _ _ _ _ 18 localized localize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 594 # text = Treatment of PAEC exposed to xenogeneic serum with the NF-kappa B inhibitors pyrrolidinedithiocarbamate (PDTC, 25 microM) and tosyl-phechloromethylketone (TPCK, 25 microM) significantly (P < 0.01) reduced leukocyte adhesion in respect to PAEC treated with human serum alone. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 PAEC PAEC PROPN NNP Number=Sing _ _ _ _ 4 exposed expose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 xenogeneic xenogeneic ADJ JJ Degree=Pos _ _ _ _ 7 serum serum NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 15 pyrrolidinedithiocarbamate pyrrolidinedithiocarbamate NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 PDTC PDTC NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 25 25 NUM CD NumType=Card _ _ _ _ 20 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 tosyl tosyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 phechloromethylketone phechloromethylketone NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 TPCK TPCK NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 25 25 NUM CD NumType=Card _ _ _ _ 30 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 significantly significantly ADV RB _ _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 P p NOUN NN Number=Sing _ _ _ _ 35 < < PUNCT -LRB- _ _ _ _ _ 36 0.01 0.01 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 40 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 respect respect NOUN NN Number=Sing _ _ _ _ 43 to to ADP IN _ _ _ _ _ 44 PAEC PAEC PROPN NNP Number=Sing _ _ _ _ 45 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 with with ADP IN _ _ _ _ _ 47 human human ADJ JJ Degree=Pos _ _ _ _ 48 serum serum NOUN NN Number=Sing _ _ _ _ 49 alone alone ADV RB _ _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 595 # text = Findings that xenogeneic serum promotes leukocyte-endothelium interaction possibly through NF-kappa B activation might be relevant for designing future therapeutic strategies aimed at prolonging xenograft survival. 1 Findings finding NOUN NNS Number=Plur _ _ _ _ 2 that that SCONJ IN _ _ _ _ _ 3 xenogeneic xenogeneic ADJ JJ Degree=Pos _ _ _ _ 4 serum serum NOUN NN Number=Sing _ _ _ _ 5 promotes promote VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 leukocyte leukocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 endothelium endothelium NOUN NN Number=Sing _ _ _ _ 9 interaction interaction NOUN NN Number=Sing _ _ _ _ 10 possibly possibly ADV RB _ _ _ _ _ 11 through through ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 might might AUX MD VerbForm=Fin _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 20 for for SCONJ IN _ _ _ _ _ 21 designing design VERB VBG VerbForm=Ger _ _ _ _ 22 future future ADJ JJ Degree=Pos _ _ _ _ 23 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 24 strategies strategy NOUN NNS Number=Plur _ _ _ _ 25 aimed aim VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 at at SCONJ IN _ _ _ _ _ 27 prolonging prolonge VERB VBG VerbForm=Ger _ _ _ _ 28 xenograft xenograft NOUN NN Number=Sing _ _ _ _ 29 survival survival NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 596 # text = Document 003002202 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002202 003002202 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 597 # text = Epstein-Barr virus replicative gene transcription during de novo infection of human thymocytes: simultaneous early expression of BZLF-1 and its repressor RAZ. 1 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 Barr Barr PROPN NNP Number=Sing _ _ _ _ 4 virus virus NOUN NN Number=Sing _ _ _ _ 5 replicative replicative ADJ JJ Degree=Pos _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 during during ADP IN _ _ _ _ _ 9 de de PROPN NNP Number=Sing _ _ _ _ 10 novo novo PROPN NNP Number=Sing _ _ _ _ 11 infection infection NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 : : PUNCT : _ _ _ _ _ 16 simultaneous simultaneous ADJ JJ Degree=Pos _ _ _ _ 17 early early ADJ JJ Degree=Pos _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 BZLF BZLF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 25 repressor repressor NOUN NN Number=Sing _ _ _ _ 26 RAZ Raz PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 598 # text = Epstein-Barr virus (EBV) is known to infect B cells and epithelial cells. 1 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 Barr Barr PROPN NNP Number=Sing _ _ _ _ 4 virus virus NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 infect infect VERB VB VerbForm=Inf _ _ _ _ 12 B b ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 599 # text = We and others have shown that EBV can also infect a subset of thymocytes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 others other NOUN NNS Number=Plur _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 EBV EBV PROPN NNP Number=Sing _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 also also ADV RB _ _ _ _ _ 10 infect infect VERB VB VerbForm=Inf _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 subset subset NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 600 # text = Infection of thymocytes was accompanied by the appearance of linear EBV genome within 8 hr of infection. 1 Infection Infection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 appearance appearance NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 linear linear NOUN NN Number=Sing _ _ _ _ 11 EBV EBV NOUN NN Number=Sing _ _ _ _ 12 genome genome NOUN NN Number=Sing _ _ _ _ 13 within within ADP IN _ _ _ _ _ 14 8 8 NUM CD NumType=Card _ _ _ _ 15 hr hr NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 601 # text = Circularization of the EBV genome was not detected. 1 Circularization Circularization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 EBV EBV PROPN NNP Number=Sing _ _ _ _ 5 genome genome NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 602 # text = This is in contrast to the infection in B cells where the genome can circularize within 24 hr of infection. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 contrast contrast NOUN NN Number=Sing _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 infection infection NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 B b ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 where where ADV WRB PronType=Rel _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 genome genome NOUN NN Number=Sing _ _ _ _ 14 can can AUX MD VerbForm=Fin _ _ _ _ 15 circularize circularize VERB VB VerbForm=Inf _ _ _ _ 16 within within ADP IN _ _ _ _ _ 17 24 24 NUM CD NumType=Card _ _ _ _ 18 hr hr NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 603 # text = The appearance of the BamHI ZLF-1 gene product, ZEBRA, by RT-PCR, was observed within 8 hr of infection. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 appearance appearance NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 BamHI BamHI PROPN NNP Number=Sing _ _ _ _ 6 ZLF ZLF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 product product NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 ZEBRA zebra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 RT Rt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 PCR PCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 within within ADP IN _ _ _ _ _ 22 8 8 NUM CD NumType=Card _ _ _ _ 23 hr hr NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 604 # text = The appearance of a novel fusion transcript (RAZ), which comprised regions of the BZLF-1 locus and the adjacent BRLF-1 locus, was detected by RT-PCR. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 appearance appearance NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 novel novel NOUN NN Number=Sing _ _ _ _ 6 fusion fusion NOUN NN Number=Sing _ _ _ _ 7 transcript transcript NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 RAZ RAZ PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 comprised comprise VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 regions region NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 BZLF BZLF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 locus locus NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 24 BRLF BRLF NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 locus locus NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 RT Rt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 PCR PCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 605 # text = ZEBRA protein was also identified in infected thymocytes by immunoprecipitation. 1 ZEBRA zebra NOUN NN Number=Sing _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 immunoprecipitation immunoprecipitation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 606 # text = In addition, we demonstrated that the EBNA-1 gene in infected thymocytes was transcribed from the Fp promoter, rather than from the Cp/Wp promoter which is used in latently infected B cells. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 infected infected ADJ JJ Degree=Pos _ _ _ _ 14 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 Fp Fp PROPN NNP Number=Sing _ _ _ _ 20 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 rather rather ADV RB _ _ _ _ _ 23 than than ADP IN _ _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 Cp/ cp/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 Wp Wp NOUN NN Number=Sing _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ _ 29 which which PRON WDT PronType=Rel _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 latently latently ADV RB _ _ _ _ _ 34 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 B b ADJ JJ Degree=Pos _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 607 # text = Transcripts encoding gp350/220, the major coat protein of EBV, were identified, but we did not find any evidence of transcription from the LMP-2A or EBER-1 loci in infected thymocytes. 1 Transcripts transcript NOUN NNS Number=Plur _ _ _ _ 2 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 3 gp350 gp350 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 / / SYM SYM _ _ _ _ SpaceAfter=No 5 220 220 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 major major ADJ JJ Degree=Pos _ _ _ _ 9 coat coat NOUN NN Number=Sing _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 19 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 find find VERB VB VerbForm=Inf _ _ _ _ 22 any any DET DT _ _ _ _ _ 23 evidence evidence NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 from from ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 LMP LMP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 2A 2A PROPN NNP Number=Sing _ _ _ _ 31 or or CCONJ CC _ _ _ _ _ 32 EBER EBER PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ _ 35 loci loci NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 infected infect ADJ JJ Degree=Pos _ _ _ _ 38 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 608 # text = These observations suggest that de novo EBV infection of thymocytes differs from infection of B cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 de de PROPN NNP Number=Sing _ _ _ _ 6 novo novo PROPN NNP Number=Sing _ _ _ _ 7 EBV EBV PROPN NNP Number=Sing _ _ _ _ 8 infection infection NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 11 differs differ NOUN NNS Number=Plur _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 infection infection NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 B b ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 609 # text = The main difference is that with thymocytes, no evidence could be found that the virus ever circularizes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 main main ADJ JJ Degree=Pos _ _ _ _ 3 difference difference NOUN NN Number=Sing _ _ _ _ 4 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 no no DET DT _ _ _ _ _ 10 evidence evidence NOUN NN Number=Sing _ _ _ _ 11 could could AUX MD VerbForm=Fin _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ _ 17 ever ever ADV RB _ _ _ _ _ 18 circularizes circularize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 610 # text = Rather, EBV remains in a linear configuration from which replicative genes are transcribed. 1 Rather Rather PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 EBV EBV PROPN NNP Number=Sing _ _ _ _ 4 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 linear linear NOUN NN Number=Sing _ _ _ _ 8 configuration configuration NOUN NN Number=Sing _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 which which PRON WDT PronType=Rel _ _ _ _ 11 replicative replicative ADJ JJ Degree=Pos _ _ _ _ 12 genes gene NOUN NNS Number=Plur _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 611 # text = Document 003002203 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002203 003002203 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 612 # text = Second messenger up-regulation of androgen receptor gene transcription is absent in androgen insensitive human prostatic carcinoma cell lines, PC-3 and DU-145. 1 Second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 2 messenger messenger NOUN NN Number=Sing _ _ _ _ 3 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 regulation regulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 androgen androgen ADJ JJ Degree=Pos _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 absent absend VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 androgen androgen NUM CD NumType=Card _ _ _ _ 15 insensitive insensitive ADJ JJ Degree=Pos _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 prostatic prostatic ADJ JJ Degree=Pos _ _ _ _ 18 carcinoma carcinoma NOUN NN Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 PC PC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 3 3 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 DU du NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 145 145 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 613 # text = A theoretical pathway of transcriptional regulation of the androgen receptor (AR) gene is via a cAMP response element (CRE) present in its promoter region (-508 to -501). 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 theoretical theoretical ADJ JJ Degree=Pos _ _ _ _ 3 pathway pathway NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 6 regulation regulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 androgen androgen ADJ JJ Degree=Pos _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 AR be NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 via via ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 cAMP camp NOUN NN Number=Sing _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ _ 20 element element NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 CRE CRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 present present ADJ JJ Degree=Pos _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ _ 28 region region NOUN NN Number=Sing _ _ _ _ 29 (- (- PUNCT . _ _ _ _ SpaceAfter=No 30 508 508 NUM CD NumType=Card _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 - - SYM SYM _ _ _ _ SpaceAfter=No 33 501 501 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 614 # text = After 20 h of stimulation with 8-bromo-cAMP, AR mRNA was upregulated in LNCaP but not in either PC-3 or DU-145 cell lines. 1 After after ADP IN _ _ _ _ _ 2 20 20 NUM CD NumType=Card _ _ _ _ 3 h h NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 8 8 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT : _ _ _ _ SpaceAfter=No 9 bromo-cAMP bromo-camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 AR ar PROPN NNP Number=Sing _ _ _ _ 12 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 upregulated upregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 LNCaP LNCaP NOUN NN Number=Sing _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 not not PART RB _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 either either DET DT _ _ _ _ _ 21 PC PC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 3 3 NUM CD NumType=Card _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 DU do NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 145 145 NUM CD NumType=Card _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 615 # text = We have demonstrated that the level of CRE binding protein (CREB) was the same in all cell lines and that the putative AR-CRE forms specific and compatible protein interactions with CREB. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 level level NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 CRE Cre PROPN NNP Number=Sing _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 same same ADJ JJ Degree=Pos _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 all all DET DT _ _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 lines line NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 that that SCONJ IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 putative putative ADJ JJ Degree=Pos _ _ _ _ 25 AR ar NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 CRE Cre NOUN NN Number=Sing _ _ _ _ 28 forms form NOUN NNS Number=Plur _ _ _ _ 29 specific specific ADJ JJ Degree=Pos _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 compatible compatible ADJ JJ Degree=Pos _ _ _ _ 32 protein protein NOUN NN Number=Sing _ _ _ _ 33 interactions interaction NOUN NNS Number=Plur _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 616 # text = The ability to regulate AR gene transcription via the second messenger pathway is lost in the PC-3 and DU-145 cell lines. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ability ability NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 5 AR be ADP IN _ _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 via via ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 11 messenger messenger NOUN NN Number=Sing _ _ _ _ 12 pathway pathway NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 lost lose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 PC PC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 3 3 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 DU do NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 145 145 NUM CD NumType=Card _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 617 # text = This may be an important primary mechanism of androgen insensitivity in prostate cancer. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 may may AUX MD VerbForm=Fin _ _ _ _ 3 be be AUX VB VerbForm=Inf _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 important important ADJ JJ Degree=Pos _ _ _ _ 6 primary primary ADJ JJ Degree=Pos _ _ _ _ 7 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 androgen androgen ADJ JJ Degree=Pos _ _ _ _ 10 insensitivity insensitivity NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 prostate prostate ADJ JJ Degree=Pos _ _ _ _ 13 cancer cancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 618 # text = Document 003002213 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002213 003002213 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 619 # text = Evidence for distinct intracellular signaling pathways in CD34+ progenitor to dendritic cell differentiation from a human cell line model. 1 Evidence evidence NOUN NN Number=Sing _ _ _ _ 2 for for ADP IN _ _ _ _ _ 3 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 4 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 5 signaling signaling NOUN NN Number=Sing _ _ _ _ 6 pathways pathway NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 CD34 CD34 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 + + SYM SYM _ _ _ _ _ 10 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 dendritic dendritic ADJ JJ Degree=Pos _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 line line NOUN NN Number=Sing _ _ _ _ 20 model model NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 620 # text = Intracellular signals that mediate differentiation of pluripotent hemopoietic progenitors to dendritic cells (DC) are largely undefined. 1 Intracellular Intracellular ADJ JJ Degree=Pos _ _ _ _ 2 signals signal NOUN NNS Number=Plur _ _ _ _ 3 that that PRON WDT PronType=Rel _ _ _ _ 4 mediate mediate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 pluripotent pluripotent ADJ JJ Degree=Pos _ _ _ _ 8 hemopoietic hemopoietic ADJ JJ Degree=Pos _ _ _ _ 9 progenitors progenitor NOUN NNS Number=Plur _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 dendritic dendritic ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 DC DC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 largely largely ADV RB _ _ _ _ _ 18 undefined undefin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 621 # text = We have previously shown that protein kinase C (PKC) activation (with phorbol ester (PMA) alone) specifically induces differentiation of primary human CD34+ hemopoietic progenitor cells (HPC) to mature DC. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 C C PROPN NNP Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 with with ADP IN _ _ _ _ _ 15 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 16 ester ester NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 alone alone ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 specifically specifically ADV RB _ _ _ _ _ 23 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 primary primary ADJ JJ Degree=Pos _ _ _ _ 27 human human ADJ JJ Degree=Pos _ _ _ _ 28 CD34 Cd34 NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 + + SYM SYM _ _ _ _ _ 30 hemopoietic hemopoietic ADJ JJ Degree=Pos _ _ _ _ 31 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 HPC HPC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 to to PART TO _ _ _ _ _ 37 mature mature VERB VB VerbForm=Inf _ _ _ _ 38 DC DC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 622 # text = We now find that cytokine-driven (granulocyte-macrophage CSF and TNF-alpha) CD34+ HPC--> 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 now now ADV RB _ _ _ _ _ 3 find find VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 driven driven NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 12 CSF Csf NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 CD34 CD34 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 + + SYM SYM _ _ _ _ _ 20 HPC HPC PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 21 --> --> SYM NFP _ _ _ _ SpaceAfter=No # sent_id = 623 # text = DC differentiation is preferentially blocked by inhibitors of PKC activation. 1 DC DC PROPN NNP Number=Sing _ _ _ _ 2 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 preferentially preferentially ADV RB _ _ _ _ _ 5 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 PKC Pkc NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 624 # text = To further identify intracellular signals and downstream events important in CD34+ HPC--> 1 To to PART TO _ _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 identify identify VERB VB VerbForm=Inf _ _ _ _ 4 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 5 signals signal NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 8 events event NOUN NNS Number=Plur _ _ _ _ 9 important important ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 CD34 CD34 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 + + SYM SYM _ _ _ _ _ 13 HPC HPC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 --> --> SYM NFP _ _ _ _ SpaceAfter=No # sent_id = 625 # text = DC differentiation we have characterized a human leukemic cell line model of this process. 1 DC DC PROPN NNP Number=Sing _ _ _ _ 2 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 line line NOUN NN Number=Sing _ _ _ _ 11 model model NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 14 process process NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 626 # text = The CD34+ myelomonocytic cell line KG1 differentiates into dendritic-like cells in response to granulocyte-macrophage CSF plus TNF-alpha, or PMA (with or without the calcium ionophore ionomycin, or TNF-alpha), with different stimuli mediating different aspects of the process. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 CD34 CD34 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 + + SYM SYM _ _ _ _ _ 4 myelomonocytic myelomonocytic ADJ JJ Degree=Pos _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 line line NOUN NN Number=Sing _ _ _ _ 7 KG1 KG1 PROPN NNP Number=Sing _ _ _ _ 8 differentiates differentiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 into into ADP IN _ _ _ _ _ 10 dendritic dendritic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 like like ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 response response NOUN NN Number=Sing _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 granulocyte granulocyte VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 20 CSF Csf NOUN NN Number=Sing _ _ _ _ 21 plus plus CCONJ CC _ _ _ _ _ 22 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 PMA Pma PROPN NNP Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 with with ADP IN _ _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 without without ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 calcium calcium NOUN NN Number=Sing _ _ _ _ 34 ionophore ionophore NOUN NN Number=Sing _ _ _ _ 35 ionomycin ionomycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 or or CCONJ CC _ _ _ _ _ 38 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 with with ADP IN _ _ _ _ _ 44 different different ADJ JJ Degree=Pos _ _ _ _ 45 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 46 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 47 different different ADJ JJ Degree=Pos _ _ _ _ 48 aspects aspect NOUN NNS Number=Plur _ _ _ _ 49 of of ADP IN _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 process process NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 627 # text = Phenotypic DC characteristics of KG1 dendritic-like cells include morphology (loosely adherent cells with long neurite processes), MHC I+/MHC 1 Phenotypic Phenotypic PROPN NNP Number=Sing _ _ _ _ 2 DC DC PROPN NNP Number=Sing _ _ _ _ 3 characteristics characteristic NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 KG1 KG1 NUM CD NumType=Card _ _ _ _ 6 dendritic dendritic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 like like ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 include include VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 morphology morphology NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 loosely loosely ADV RB _ _ _ _ _ 14 adherent adherent ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 long long ADJ JJ Degree=Pos _ _ _ _ 18 neurite neurite NOUN NN Number=Sing _ _ _ _ 19 processes process NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 MHC MHC PROPN NNP Number=Sing _ _ _ _ 23 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 24 +/MHC +/MHC PROPN NNP Number=Sing _ _ _ _ # sent_id = 628 # text = IIbright/CD83+/CD86+/CD14- surface 1 IIbright/CD83+/CD86+/CD14 IIbright/CD83+/CD86+/CD14 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ _ 3 surface surface NOUN NN Number=Sing _ _ _ _ # sent_id = 629 # text = Ag expression, and RelB and DC-CK1 gene expression. 1 Ag ag ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 RelB RelB PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 DC DC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 CK1 CK1 PROPN NNP Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 630 # text = Functional DC characteristics include fluid phase macromolecule uptake (FITC-dextran) and activation of resting T cells. 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 DC DC PROPN NNP Number=Sing _ _ _ _ 3 characteristics characteristic NOUN NNS Number=Plur _ _ _ _ 4 include include VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 fluid fluid ADJ JJ Degree=Pos _ _ _ _ 6 phase phase NOUN NN Number=Sing _ _ _ _ 7 macromolecule macromolecule NOUN NN Number=Sing _ _ _ _ 8 uptake uptake NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 FITC Fitc NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 dextran dextran NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 of of SCONJ IN _ _ _ _ _ 17 resting rest VERB VBG VerbForm=Ger _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 631 # text = Comparison of KG1 to the PMA-unresponsive subline KG1a reveals differences in expression of TNF receptors 1 and 2; PKC isoforms alpha, beta I, beta II, and mu; and RelB, suggesting that these components/pathways are important for DC differentiation. 1 Comparison Comparison NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 KG1 KG1 NUM CD NumType=Card _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 unresponsive unresponsive ADJ JJ Degree=Pos _ _ _ _ 9 subline subline NOUN NN Number=Sing _ _ _ _ 10 KG1 KG1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 reveals reveal VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 differences difference NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 TNF TNF PROPN NNP Number=Sing _ _ _ _ 18 receptors receptor NOUN NNS Number=Plur _ _ _ _ 19 1 1 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ; ; PUNCT , _ _ _ _ _ 23 PKC Pkc NOUN NN Number=Sing _ _ _ _ 24 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 25 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 beta beto INTJ UH _ _ _ _ _ 28 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 beta beta NOUN NN Number=Sing _ _ _ _ 31 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 mu mu NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ; ; PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 RelB Relb NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 40 that that SCONJ IN _ _ _ _ _ 41 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 42 components component NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 / / PUNCT , _ _ _ _ SpaceAfter=No 44 pathways pathway NOUN NNS Number=Plur _ _ _ _ 45 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 46 important important ADJ JJ Degree=Pos _ _ _ _ 47 for for ADP IN _ _ _ _ _ 48 DC DC PROPN NNP Number=Sing _ _ _ _ 49 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 632 # text = Together, these findings demonstrate that cytokine or phorbol ester stimulation of KG1 is a model of human CD34+ HPC to DC differentiation and suggest that specific intracellular signaling pathways mediate specific events in DC lineage commitment. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 findings finding NOUN NNS Number=Plur _ _ _ _ 5 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 10 ester ester NOUN NN Number=Sing _ _ _ _ 11 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 KG1 KG1 PROPN NNP Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 model model NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 CD34 CD34 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 + + SYM SYM _ _ _ _ _ 21 HPC HPC PROPN NNP Number=Sing _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 DC DC PROPN NNP Number=Sing _ _ _ _ 24 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 that that SCONJ IN _ _ _ _ _ 28 specific specific ADJ JJ Degree=Pos _ _ _ _ 29 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 30 signaling signaling NOUN NN Number=Sing _ _ _ _ 31 pathways pathway NOUN NNS Number=Plur _ _ _ _ 32 mediate mediate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 specific specific ADJ JJ Degree=Pos _ _ _ _ 34 events event NOUN NNS Number=Plur _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 DC DC PROPN NNP Number=Sing _ _ _ _ 37 lineage lineage NOUN NN Number=Sing _ _ _ _ 38 commitment commitment NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 633 # text = Document 003002219 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002219 003002219 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 634 # text = Induction of tyrosine phosphorylation and T-cell activation by vanadate peroxide, an inhibitor of protein tyrosine phosphatases. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 4 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 vanadate vanadate ADJ JJ Degree=Pos _ _ _ _ 11 peroxide peroxide NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 18 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 635 # text = Rapid tyrosine phosphorylation of key cellular proteins is a crucial event in the transduction of activation signals to T-lymphocytes. 1 Rapid rapid ADJ JJ Degree=Pos _ _ _ _ 2 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 3 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 key key ADJ JJ Degree=Pos _ _ _ _ 6 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 7 proteins protein NOUN NNS Number=Plur _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 11 event event NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 transduction transduction NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 signals signal NOUN NNS Number=Plur _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 636 # text = The regulatory role of protein tyrosine phosphatases (PTPases) in this process was explored by studying the effects of a powerful PTPase inhibitor, vanadate peroxide (pervanadate), on the activation cascade of Jurkat human leukaemic T-cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 3 role role NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 7 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 PTPases PTPase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 13 process process NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 explored explore VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by SCONJ IN _ _ _ _ _ 17 studying study VERB VBG VerbForm=Ger _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 effects effect NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 powerful powerful ADJ JJ Degree=Pos _ _ _ _ 23 PTPase PTPase NOUN NN Number=Sing _ _ _ _ 24 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 vanadate vanadate NOUN NN Number=Sing _ _ _ _ 27 peroxide peroxide NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 pervanadate pervanadate NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 on on ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 activation activation NOUN NN Number=Sing _ _ _ _ 35 cascade cascade NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 38 human human ADJ JJ Degree=Pos _ _ _ _ 39 leukaemic leukaemic ADJ JJ Degree=Pos _ _ _ _ 40 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 637 # text = Pervanadate induced activation of the tyrosine kinases lck and fyn (4- and 3-fold respectively) and a dramatic increase in tyrosine phosphorylation of cellular proteins, notably phospholipase C gamma 1. 1 Pervanadate Pervanadate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 7 kinases kinase NOUN NNS Number=Plur _ _ _ _ 8 lck lck NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 fyn fyn NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 fold fold NOUN NN Number=Sing _ _ _ _ 18 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 dramatic dramatic ADJ JJ Degree=Pos _ _ _ _ 23 increase increase NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 26 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 29 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 notably notably ADV RB _ _ _ _ _ 32 phospholipase phospholipase NOUN NN Number=Sing _ _ _ _ 33 C C PROPN NNP Number=Sing _ _ _ _ 34 gamma gamma NOUN NN Number=Sing _ _ _ _ 35 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 638 # text = After this event, we observed a rise in intracellular Ca2+ concentration, corresponding to an influx. 1 After after ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 event event NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 rise rise NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 11 Ca2 Ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 + + SYM SYM _ _ _ _ _ 13 concentration concentration NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 corresponding correspond VERB VBG VerbForm=Ger _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 influx influx NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 639 # text = This effect required surface expression of the CD45 PTPase and was not observed in CD45-deficient variants of Jurkat cells. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 surface surface NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 CD45 CD45 PROPN NNP Number=Sing _ _ _ _ 9 PTPase PTPase PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 CD45 CD45 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 18 variants variant NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 640 # text = In the CD45-negative variant, the effect of pervanadate on tyrosine phosphorylation was globally decreased and some phosphorylated substrates were specifically missing. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 CD45 Cd45 NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 negative negative ADJ JJ Degree=Pos _ _ _ _ 6 variant variant NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 effect effect NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 pervanadate pervanadate NOUN NN Number=Sing _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 14 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 globally globally ADV RB _ _ _ _ _ 17 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 some some DET DT _ _ _ _ _ 20 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 substrates substrate NOUN NNS Number=Plur _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 specifically specifically ADV RB _ _ _ _ _ 24 missing missing VERB VBG Tense=Pres|VerbForm=Part _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 641 # text = Pervanadate also stimulated transcription of the c-fos gene and accumulation of its mRNA as well as several other hallmarks of T-lymphocyte activation such as surface expression of the CD69 antigen and the interleukin 2 receptor alpha-chain (CD25). 1 Pervanadate Pervanadate PROPN NNP Number=Sing _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 stimulated stimulate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 fos fo NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 16 as as ADV RB _ _ _ _ _ 17 well well ADV RB Degree=Pos _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 several several ADJ JJ Degree=Pos _ _ _ _ 20 other other ADJ JJ Degree=Pos _ _ _ _ 21 hallmarks hallmark NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 such such ADJ JJ Degree=Pos _ _ _ _ 27 as as ADP IN _ _ _ _ _ 28 surface surface NOUN NN Number=Sing _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 CD69 CD69 PROPN NNP Number=Sing _ _ _ _ 33 antigen antigen NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 37 2 2 NUM CD NumType=Card _ _ _ _ 38 receptor receptor NOUN NN Number=Sing _ _ _ _ 39 alpha-chain alpha-chain NOUN NN Number=Sing _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 CD25 CD25 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 642 # text = Pervanadate synergized with signals delivered by T-cell antigen receptor engagement or by a phorbol ester to induce interleukin 2 production. 1 Pervanadate Pervanadate NOUN NN Number=Sing _ _ _ _ 2 synergized synergize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 signals signal NOUN NNS Number=Plur _ _ _ _ 5 delivered deliver VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 engagement engagement NOUN NN Number=Sing _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 16 ester ester NOUN NN Number=Sing _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 induce induce VERB VB VerbForm=Inf _ _ _ _ 19 interleukin interleukin ADV RB _ _ _ _ _ 20 2 2 NUM CD NumType=Card _ _ _ _ 21 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 643 # text = Pervanadate activated NF-kappa B, as shown by an increase in DNA-binding activity of this transcription factor. 1 Pervanadate Pervanadate PROPN NNP Number=Sing _ _ _ _ 2 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 as as SCONJ IN _ _ _ _ _ 9 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 increase increase NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 644 # text = We thus conclude that PTPases play a crucial role in the negative regulation of signal transduction culminating in T-lymphocyte activation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 thus thus ADV RB _ _ _ _ _ 3 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 PTPases PTPase PROPN NNPS Number=Plur _ _ _ _ 6 play play VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 9 role role NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 negative negative ADJ JJ Degree=Pos _ _ _ _ 13 regulation regulation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 signal signal NOUN NN Number=Sing _ _ _ _ 16 transduction transduction NOUN NN Number=Sing _ _ _ _ 17 culminating culminat VERB VBG VerbForm=Ger _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 645 # text = Moreover, induction of tyrosine phosphorylation appears sufficient per se to initiate a complete activation programme. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 induction induction NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 6 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 7 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 9 per per ADP IN _ _ _ _ _ 10 se se NOUN NN Number=Sing _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 initiate initiate VERB VB VerbForm=Inf _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 complete complete ADJ JJ Degree=Pos _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 programme programme NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 646 # text = Document 003002221 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002221 003002221 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 647 # text = Relationship between IkappaBalpha constitutive expression, TNFalpha synthesis, and apoptosis in EBV-infected lymphoblastoid cells. 1 Relationship relationship NOUN NN Number=Sing _ _ _ _ 2 between between ADP IN _ _ _ _ _ 3 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 4 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 8 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 lymphoblastoid lymphoblastoid ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 648 # text = In order to understand the role of NF-kappaB in EBV transformation we have established stably transfected IkappaBalpha into lymphoblastoid cells. 1 In in ADP IN _ _ _ _ _ 2 order order NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 understand understand VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 EBV EBV PROPN NNP Number=Sing _ _ _ _ 13 transformation transformation NOUN NN Number=Sing _ _ _ _ 14 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 15 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 established establish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 stably stably ADV RB _ _ _ _ _ 18 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 20 into into ADP IN _ _ _ _ _ 21 lymphoblastoid lymphoblastoid ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 649 # text = Two clones were obtained in which the loss of NF-kappaB binding activity correlated with the constitutive expression of the transgenic IkappaBalpha. 1 Two two NUM CD NumType=Card _ _ _ _ 2 clones clone NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 obtained obtain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 loss loss NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 23 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 650 # text = Protein latency expression was determined by immunocytochemistry. 1 Protein protein NOUN NN Number=Sing _ _ _ _ 2 latency latency NOUN NN Number=Sing _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 immunocytochemistry immunocytochemistry NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 651 # text = Expression of surface markers, intracytoplasmic content of cytokines cell cycle analysis after BrdU incorporation and DNA staining with propidium iodide were studied by flow cytometry. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 surface surface NOUN NN Number=Sing _ _ _ _ 4 markers marker NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 intracytoplasmic intracytoplasmic ADJ JJ Degree=Pos _ _ _ _ 7 content content NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 cycle cycle NOUN NN Number=Sing _ _ _ _ 12 analysis analysis NOUN NN Number=Sing _ _ _ _ 13 after after ADP IN _ _ _ _ _ 14 BrdU Brdu PROPN NNP Number=Sing _ _ _ _ 15 incorporation incorporation NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 DNA dna NOUN NN Number=Sing _ _ _ _ 18 staining stain VERB VBG VerbForm=Ger _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 propidium propidium NOUN NN Number=Sing _ _ _ _ 21 iodide iodide NOUN NN Number=Sing _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 flow flow NOUN NN Number=Sing _ _ _ _ 26 cytometry cytometry NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 652 # text = Percentage of apoptotic cells was determined by in-situ labelling of DNA strand breaks. 1 Percentage percentage NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 in in ADP IN _ _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 situ situ NOUN NN Number=Sing _ _ _ _ 11 labelling labelling NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 DNA dna NOUN NN Number=Sing _ _ _ _ 14 strand strand NOUN NN Number=Sing _ _ _ _ 15 breaks break NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 653 # text = No significative changes in EBV latency nor in cell surface marker expression was found. 1 No no DET DT _ _ _ _ _ 2 significative significative ADJ JJ Degree=Pos _ _ _ _ 3 changes change NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 EBV EBV PROPN NNP Number=Sing _ _ _ _ 6 latency latency PROPN NNP Number=Sing _ _ _ _ 7 nor nor CCONJ CC _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 surface surface NOUN NN Number=Sing _ _ _ _ 11 marker marker NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 654 # text = In contrast, intracytoplasmic TNFalpha levels were strongly reduced in transfected clones. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 intracytoplasmic intracytoplasmic ADJ JJ Degree=Pos _ _ _ _ 5 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 strongly strongly ADV RB _ _ _ _ _ 9 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 655 # text = Furthermore, 30% of IkappaBalpha transfected cells were apoptotic after 8 h of TNFalpha treatment. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 30 30 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 % % SYM NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 7 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 11 after after ADP IN _ _ _ _ _ 12 8 8 NUM CD NumType=Card _ _ _ _ 13 h h NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 16 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 656 # text = This correlated with a strong reduction of BrdU incorporation after 24 h of TNFalpha treatment. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 correlated correlate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 strong strong ADJ JJ Degree=Pos _ _ _ _ 6 reduction reduction NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 BrdU BrdU PROPN NNP Number=Sing _ _ _ _ 9 incorporation incorporation NOUN NN Number=Sing _ _ _ _ 10 after after ADP IN _ _ _ _ _ 11 24 24 NUM CD NumType=Card _ _ _ _ 12 h h NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 15 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 657 # text = No effect was seen with non transfected cells or with cells transfected with a control plasmid. 1 No no DET DT _ _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 non non X AFX _ _ _ _ _ 7 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 control control NOUN NN Number=Sing _ _ _ _ 16 plasmid plasmid NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 658 # text = Our results suggest that the TNFalpha gene could be one of the targets of NF-kappaB in EBV infected cells and that NF-kappaB protects EBV-infected cells from apoptosis induced by TNFalpha, which may favour the proliferative effect of this cytokine. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 TNFalpha TNFalpha NOUN NN Number=Sing _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 could could AUX MD VerbForm=Fin _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 one one NUM CD NumType=Card _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 targets target NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 EBV EBV PROPN NNP Number=Sing _ _ _ _ 20 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 27 protects protects NOUN NNS Number=Plur _ _ _ _ 28 EBV haEbve PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 from from ADP IN _ _ _ _ _ 33 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 34 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 which which PRON WDT PronType=Rel _ _ _ _ 39 may may AUX MD VerbForm=Fin _ _ _ _ 40 favour favour VERB VB VerbForm=Inf _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 43 effect effect NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 46 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 659 # text = Document 003002228 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002228 003002228 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 660 # text = Involvement of the N-terminal region of the human mineralocorticoid receptor hormone-binding domain in agonist and antagonist binding as revealed by a new monoclonal antibody. 1 Involvement involvement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 terminal terminal NOUN NN Number=Sing _ _ _ _ 6 region region NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 mineralocorticoid mineralocorticoid NOUN NN Number=Sing _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 hormone hormone NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 domain domain NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 agonist agonist NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 antagonist antagonist NOUN NN Number=Sing _ _ _ _ 20 binding bind VERB VBG VerbForm=Ger _ _ _ _ 21 as as SCONJ IN _ _ _ _ _ 22 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 new new ADJ JJ Degree=Pos _ _ _ _ 26 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 27 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 661 # text = To gain a better understanding of the mechanism of binding to the human mineralocorticoid receptor (hMR), we developed a new monoclonal antibody (mAb) raised against the hormone-binding domain (HBD). 1 To to PART TO _ _ _ _ _ 2 gain gain VERB VB VerbForm=Inf _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 better better ADJ JJR Degree=Cmp _ _ _ _ 5 understanding understanding NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 9 of of SCONJ IN _ _ _ _ _ 10 binding bind VERB VBG VerbForm=Ger _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 mineralocorticoid mineralocorticoid NOUN NN Number=Sing _ _ _ _ 15 receptor receptor NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 hMR hMR NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 21 developed develop VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 new new ADJ JJ Degree=Pos _ _ _ _ 24 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 25 antibody antibody NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 mAb mAb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 raised raise VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 against against ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 hormone hormone NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 binding binding VERB VBG VerbForm=Ger _ _ _ _ 35 domain domain NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 HBD HBD NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 662 # text = For this purpose, mice were immunized with a fusion protein including the sequence Thr729-Lys984 of hMR. 1 For for ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 purpose purpose NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 mice mouse NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 immunized immunize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 fusion fusion NOUN NN Number=Sing _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 including include VERB VBG VerbForm=Ger _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 sequence sequence NOUN NN Number=Sing _ _ _ _ 15 Thr729 Thr729 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT : _ _ _ _ SpaceAfter=No 17 Lys984 lys984 NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 hMR hMR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 663 # text = After ELISA screening, mAb 18C7 was selected for its specificity towards the HBD. 1 After after SCONJ IN _ _ _ _ _ 2 ELISA ELISA PROPN NNP Number=Sing _ _ _ _ 3 screening scree VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 mAb mAb PROPN NNP Number=Sing _ _ _ _ 6 18C7 18C7 NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 selected select VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 11 specificity specificity NOUN NN Number=Sing _ _ _ _ 12 towards towards ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 HBD hbd NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 664 # text = This antibody recognized both the denatured and native MR forms, as well as the hetero-oligomeric MR form and the transformed MR state. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 antibody antibody NOUN NN Number=Sing _ _ _ _ 3 recognized recognize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 both both CCONJ CC _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 denatured denatured ADJ JJ Degree=Pos _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 native native ADJ JJ Degree=Pos _ _ _ _ 9 MR mr NOUN NN Number=Sing _ _ _ _ 10 forms form NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 as as ADV RB _ _ _ _ _ 13 well well ADV RB Degree=Pos _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 hetero hetero NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 oligomeric oligomeric ADJ JJ Degree=Pos _ _ _ _ 19 MR mr NOUN NN Number=Sing _ _ _ _ 20 form form NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 MR mr NOUN NN Number=Sing _ _ _ _ 25 state state NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 665 # text = By using several HBD subfragments, the mAb 18C7 epitope was located in the N-terminal region of the HBD from Thr729 to Leu765. 1 By by SCONJ IN _ _ _ _ _ 2 using use VERB VBG VerbForm=Ger _ _ _ _ 3 several several ADJ JJ Degree=Pos _ _ _ _ 4 HBD hbd NOUN NN Number=Sing _ _ _ _ 5 subfragments subfragment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 mAb mAb PROPN NNP Number=Sing _ _ _ _ 9 18C7 18C7 NUM CD NumType=Card _ _ _ _ 10 epitope epitope NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 terminal terminal NOUN NN Number=Sing _ _ _ _ 17 region region NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 HBD hbd PROPN NNP Number=Sing _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 Thr729 Thr729 NUM CD NumType=Card _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 Leu765 Leu765 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 666 # text = We then studied the effect of the antibody on aldosterone and progesterone binding to the hMR. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 then then ADV RB PronType=Dem _ _ _ _ 3 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 antibody antibody NOUN NN Number=Sing _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 aldosterone aldosterone NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 progesterone progesterone NOUN NN Number=Sing _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 hMR hmr NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 667 # text = When 18C7 was incubated with liganded MR, it was able to partly displace (20%) the hormone from its binding site. 1 When when ADV WRB PronType=Int _ _ _ _ 2 18C7 18C7 NUM CD NumType=Card _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 incubated incubate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 liganded ligand VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 MR mr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 able able ADJ JJ Degree=Pos _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 partly partly VERB VB VerbForm=Inf _ _ _ _ 14 displace displace NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 hormone hormone NOUN NN Number=Sing _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 23 binding bind VERB VBG VerbForm=Ger _ _ _ _ 24 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 668 # text = When 18C7 was incubated with MR before aldosterone or progesterone, the antibody inhibited 75-80% of the binding. 1 When when ADV WRB PronType=Int _ _ _ _ 2 18C7 18C7 NUM CD NumType=Card _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 incubated incubate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 MR mr PROPN NNP Number=Sing _ _ _ _ 7 before before ADP IN _ _ _ _ _ 8 aldosterone aldosterone NOUN NN Number=Sing _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 progesterone progesterone NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 antibody antibody NOUN NN Number=Sing _ _ _ _ 14 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 75 75 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - SYM SYM _ _ _ _ SpaceAfter=No 17 80 80 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 % % SYM NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 binding binding NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 669 # text = The effect of 18C7 on the binding was similar with both hormones. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 18C7 18C7 NUM CD NumType=Card _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 binding binding NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 similar similar ADJ JJ Degree=Pos _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 both both DET DT _ _ _ _ _ 12 hormones hormone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 670 # text = A sucrose gradient analysis indicated the simultaneous presence of two kinds of receptor complexes: the steroid-MR complex and the antibody-MR complex. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 sucrose sucrose NOUN NN Number=Sing _ _ _ _ 3 gradient gradient NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 simultaneous simultaneous ADJ JJ Degree=Pos _ _ _ _ 8 presence presence NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 two two NUM CD NumType=Card _ _ _ _ 11 kinds kind NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ _ 14 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 : : PUNCT : _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 steroid steroid NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 MR mr NOUN NN Number=Sing _ _ _ _ 20 complex complex NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 antibody antibody ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 MR mr NOUN NN Number=Sing _ _ _ _ 26 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 671 # text = After its associated proteins, especially the heat-shock protein hsp90, had been cross-linked with the hMR by dimethylpimelimidate, 18C7 was still able to react with the receptor. 1 After after SCONJ IN _ _ _ _ _ 2 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 3 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 especially especially ADV RB _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 heat heat NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 shock shock NOUN NN Number=Sing _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 hsp90 hsp90 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 17 cross cross ADV RB _ _ _ _ SpaceAfter=No 18 -linked -linked ADJ JJ Degree=Pos _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 hMR hmr NOUN NN Number=Sing _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 dimethylpimelimidate dimethylpimelimidate NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 18C7 18C7 NOUN NN Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 still still ADV RB _ _ _ _ _ 28 able able ADJ JJ Degree=Pos _ _ _ _ 29 to to PART TO _ _ _ _ _ 30 react react VERB VB VerbForm=Inf _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 672 # text = Our results indicated that the epitope recognized by 18C7 was directly implicated in hormone binding. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 epitope epitope NOUN NN Number=Sing _ _ _ _ 7 recognized recognize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 18C7 18C7 NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 directly directly ADV RB _ _ _ _ _ 12 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 hormone hormone NOUN NN Number=Sing _ _ _ _ 15 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 673 # text = The lack of steroid binding of HBD mutants with the Thr729-Leu765 sequence deleted [Jalaguier, Mesnier, Leger and Auzou (1996) J.Steroid Biochem.Mol.Biol.57, 43-50] supports this hypothesis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 lack lack NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 steroid steroid NOUN NN Number=Sing _ _ _ _ 5 binding binding VERB VBG VerbForm=Ger _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 HBD Hbd PROPN NNP Number=Sing _ _ _ _ 8 mutants mutant NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 Thr729 Thr729 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 Leu765 Leu765 PROPN NNP Number=Sing _ _ _ _ 14 sequence sequence NOUN NN Number=Sing _ _ _ _ 15 deleted delete VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 Jalaguier Jalaguier PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 Mesnier Mesnier PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 Leger Leger PROPN NNP Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 Auzou Auzou PROPN NNP Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 1996 1996 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 J.Steroid J.Steroid PROPN NNP Number=Sing _ _ _ _ 28 Biochem.Mol.Biol Biochem.Mol.Biol PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 .57 .57 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 43 43 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 - - SYM SYM _ _ _ _ SpaceAfter=No 33 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 ] ] PUNCT -RRB- _ _ _ _ _ 35 supports support VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 37 hypothesis hypothesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 674 # text = Because of the similar behaviours of aldosterone and progesterone, we conclude that the N-terminal Thr729-Leu765 region of the HBD is similarly involved in the binding of both hormones. 1 Because because ADP IN _ _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 similar similar ADJ JJ Degree=Pos _ _ _ _ 5 behaviours behaviour NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 aldosterone aldosterone NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 progesterone progesterone NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 12 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 N- n- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 terminal terminal NOUN NN Number=Sing _ _ _ _ 17 Thr729 Thr729 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - SYM SYM _ _ _ _ SpaceAfter=No 19 Leu765 Leu765 NUM CD NumType=Card _ _ _ _ 20 region region NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 HBD hbd NOUN NN Number=Sing _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 similarly similarly ADV RB _ _ _ _ _ 26 involved involved ADJ JJ Degree=Pos _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 binding binding NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 both both DET DT _ _ _ _ _ 32 hormones hormone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 675 # text = Document 003002230 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002230 003002230 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 676 # text = High molecular weight dextran sulfate increases the activity of NF-kappaB-regulated promoter in monocyte-derived macrophages. 1 High high ADJ JJ Degree=Pos _ _ _ _ 2 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 3 weight weight NOUN NN Number=Sing _ _ _ _ 4 dextran dextrun NOUN NN Number=Sing _ _ _ _ 5 sulfate sulfate NOUN NN Number=Sing _ _ _ _ 6 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 677 # text = It is known that sulfated polysaccharides can mimic the action of common T-cell mitogens. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 sulfated sulfate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 polysaccharides polysaccharide NOUN NNS Number=Plur _ _ _ _ 7 can can AUX MD VerbForm=Fin _ _ _ _ 8 mimic mimic ADJ JJ Degree=Pos _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 action action NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 common common ADJ JJ Degree=Pos _ _ _ _ 13 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 mitogens mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 678 # text = To investigate the molecular basis of the mitogenic effect of high molecular weight dextran sulfate (HMDS), monocyte-derived macrophages were transfected with recombinant plasmid containing chloramphenicol acetyl transferase (CAT) reporter gene under the control of the HIV-1 long terminal repeat (LTR) promoter, which is regulated by transcription factor NF-kappaB. 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 5 basis basis NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 9 effect effect NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 high high ADJ JJ Degree=Pos _ _ _ _ 12 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 13 weight weight NOUN NN Number=Sing _ _ _ _ 14 dextran dextran NOUN NN Number=Sing _ _ _ _ 15 sulfate sulfate NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 HMDS hmds NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 monocyte monocyte VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 24 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 transfected transfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 recombinant recombinant NOUN NN Number=Sing _ _ _ _ 28 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 29 containing contain VERB VBG VerbForm=Ger _ _ _ _ 30 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 31 acetyl acetyl NOUN NN Number=Sing _ _ _ _ 32 transferase transferase NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 CAT cat NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 reporter reporter NOUN NN Number=Sing _ _ _ _ 37 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 under under ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 control control NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 1 1 NUM CD NumType=Card _ _ _ _ 46 long long ADJ JJ Degree=Pos _ _ _ _ 47 terminal terminal NOUN NN Number=Sing _ _ _ _ 48 repeat repeat NOUN NN Number=Sing _ _ _ _ 49 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 50 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ _ 52 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 , , PUNCT , _ _ _ _ _ 54 which which PRON WDT PronType=Rel _ _ _ _ 55 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 56 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 57 by by ADP IN _ _ _ _ _ 58 transcription transcription NOUN NN Number=Sing _ _ _ _ 59 factor factor NOUN NN Number=Sing _ _ _ _ 60 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 61 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 62 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 63 . . PUNCT . _ _ _ _ _ # sent_id = 679 # text = We observed that HMDS, similar to bacterial lipopolysaccharide (LPS), increases the expression of CAT reporter gene suggesting increased activity of NF-kappaB. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 HMDS HMDS PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 similar similar ADJ JJ Degree=Pos _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 9 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 LPS Lp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 CAT Cat ADJ JJ Degree=Pos _ _ _ _ 19 reporter reporter NOUN NN Number=Sing _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 suggesting suggeste VERB VBG VerbForm=Ger _ _ _ _ 22 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 680 # text = The activation of NF-kappaB correlated with the increased expression of B7.1 molecules. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 correlated correlate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 B7.1 B7.1 NUM CD NumType=Card _ _ _ _ 14 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 681 # text = It was postulated that this NF-kappaB-regulated promoter might play a role in the activation of the accessory cells as well as the rate of replication of HIV-1 in monocyte-derived macrophages. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 postulated postulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 kappaB- kappaB- PUNCT : _ _ _ _ SpaceAfter=No 9 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 might might AUX MD VerbForm=Fin _ _ _ _ 12 play play VERB VB VerbForm=Inf _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 role role NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 accessory accessory ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 as as ADV RB _ _ _ _ _ 23 well well ADV RB Degree=Pos _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 rate rate NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 replication replication NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 682 # text = Document 003002237 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002237 003002237 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 683 # text = ETS1 transactivates the human GM-CSF promoter in Jurkat T cells stimulated with PMA and ionomycin. 1 ETS1 ETS1 PROPN NNP Number=Sing _ _ _ _ 2 transactivates transactivate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 CSF CSF PROPN NNP Number=Sing _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 PMA Pma PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 ionomycin ionomycin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 684 # text = Activation of T helper cells results in coordinate expression of a number of cytokines involved in differentiation, proliferation and activation of the haematopoietic system. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 helper helper ADJ JJR Degree=Cmp _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 results result NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 coordinate coordinate ADJ JJ Degree=Pos _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 number number NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 15 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 haematopoietic haematopoietic ADJ JJ Degree=Pos _ _ _ _ 25 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 685 # text = Granulocyte-macrophage colony-stimulating factor (GM-CSF) is one such cytokine whose increased expression results partly from increases in transcription. 1 Granulocyte Granulocyte ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 4 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 stimulating stimulating NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 one one NUM CD NumType=Card _ _ _ _ 15 such such ADJ JJ Degree=Pos _ _ _ _ 16 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 17 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 18 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 results result NOUN NNS Number=Plur _ _ _ _ 21 partly partly ADV RB _ _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 increases increase NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 686 # text = Cis-acting elements with NF kappa B, AP-1 and ETS-like motifs have been identified in the promoter region of the GM-CSF gene, which are important for transcriptional activity following PMA and ionomycin stimulation. 1 Cis Cis PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 acting act VERB VBG VerbForm=Ger _ _ _ _ 4 elements element NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ _ 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 ETS Ets NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 like like SCONJ IN _ _ _ _ _ 17 motifs motif NOUN NNS Number=Plur _ _ _ _ 18 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 20 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ _ 24 region region NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 CSF CSF PROPN NNP Number=Sing _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 which which PRON WDT PronType=Rel _ _ _ _ 33 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 important important ADJ JJ Degree=Pos _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 37 activity activity NOUN NN Number=Sing _ _ _ _ 38 following follow VERB VBG VerbForm=Ger _ _ _ _ 39 PMA PMA PROPN NNP Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 ionomycin ionomycin ADP IN _ _ _ _ _ 42 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 687 # text = A number of the ETS family of transcription factors are expressed in T cells, including ETS1 and ELF1. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 number number NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 ETS Ets NOUN NN Number=Sing _ _ _ _ 6 family family NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factors factor NOUN NNS Number=Plur _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 including include VERB VBG VerbForm=Ger _ _ _ _ 17 ETS1 ETS1 PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 ELF1 ELF1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 688 # text = Here we describe the ability of these factors to interact with a site (GM5), located within the CLE0 element, -47 to -40 upstream of the GM-CSF transcription initiation site. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 describe describe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 ability ability NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 interact interact VERB VB VerbForm=Inf _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 site site NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 GM5 GM5 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 within within ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 CLE0 CLE0 PROPN NNP Number=Sing _ _ _ _ 22 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 47 47 NUM CD NumType=Card _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 - - SYM SYM _ _ _ _ SpaceAfter=No 28 40 40 NUM CD NumType=Card _ _ _ _ 29 upstream upstream NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 CSF CSF PROPN NNP Number=Sing _ _ _ _ 35 transcription transcription NOUN NN Number=Sing _ _ _ _ 36 initiation initiation NOUN NN Number=Sing _ _ _ _ 37 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 689 # text = Exogenous ETS1, but not ELF1, can transactivate GM-CSF, through the GM5 site, in a PMA/ionomycin dependent manner. 1 Exogenous Exogenous PROPN NNP Number=Sing _ _ _ _ 2 ETS1 Ets1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 but but CCONJ CC _ _ _ _ _ 5 not not ADV RB _ _ _ _ _ 6 ELF1 ELF1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 transactivate transactivate VERB VB VerbForm=Inf _ _ _ _ 10 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 through through ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 GM5 GM5 PROPN NNP Number=Sing _ _ _ _ 17 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 / / PUNCT , _ _ _ _ SpaceAfter=No 23 ionomycin ionomycin ADP IN _ _ _ _ _ 24 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 25 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 690 # text = Other unidentified ETS-like factors present in Jurkat cells are also capable of binding GM5. 1 Other other ADJ JJ Degree=Pos _ _ _ _ 2 unidentified unidentified ADJ JJ Degree=Pos _ _ _ _ 3 ETS Et NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 like like SCONJ IN _ _ _ _ _ 6 factors factor NOUN NNS Number=Plur _ _ _ _ 7 present present VERB VB VerbForm=Inf _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 also also ADV RB _ _ _ _ _ 13 capable capable ADJ JJ Degree=Pos _ _ _ _ 14 of of SCONJ IN _ _ _ _ _ 15 binding bind VERB VBG VerbForm=Ger _ _ _ _ 16 GM5 GM5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 691 # text = Mutation of the core ETS binding site from -GGAA- to -GGAT- prevents the binding of ETS-like factors with the exception of ETS1. 1 Mutation Mutation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 core core NOUN NN Number=Sing _ _ _ _ 5 ETS Et NOUN NN Number=Sing _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 site site NOUN NN Number=Sing _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 GGAA GGAA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 GGAT Ggat NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ _ 16 prevents prevent NOUN NNS Number=Plur _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 binding binding NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 ETS Ets NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 like like SCONJ IN _ _ _ _ _ 23 factors factor NOUN NNS Number=Plur _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 exception exception NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 ETS1 ETS1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 692 # text = The GM-CSF promoter, modified in this way to be ETS1 specific, is fully responsive to PMA/ionomycin induction, in addition to ETS1 transactivation in the presence of PMA and ionomycin. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 CSF CSF PROPN NNP Number=Sing _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 modified modify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 10 way way NOUN NN Number=Sing _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 ETS1 ETS1 PROPN NNP Number=Sing _ _ _ _ 14 specific specific PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 fully fully ADV RB _ _ _ _ _ 18 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 ionomycin ionomycin ADJ JJ Degree=Pos _ _ _ _ 23 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 addition addition NOUN NN Number=Sing _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 ETS1 ETS1 NUM CD NumType=Card _ _ _ _ 29 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 presence presence NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 PMA PMA PROPN NNP Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 ionomycin ionomycin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 693 # text = Together these data suggest that ETS1 may be involved in mediating the increased GM-CSF production associated with T cell activation. 1 Together together SCONJ IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 data data NOUN NN Number=Sing _ _ _ _ 4 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 ETS1 Ets1 PROPN NNP Number=Sing _ _ _ _ 7 may may AUX MD VerbForm=Fin _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 involved involved ADJ JJ Degree=Pos _ _ _ _ 10 in in SCONJ IN _ _ _ _ _ 11 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 CSF CSF PROPN NNP Number=Sing _ _ _ _ 17 production production NOUN NN Number=Sing _ _ _ _ 18 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 694 # text = Document 003002240 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002240 003002240 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 695 # text = Monoclonal anti-endothelial cell antibodies from a patient with Takayasu arteritis activate endothelial cells from large vessels. 1 Monoclonal Monoclonal ADJ JJ Degree=Pos _ _ _ _ 2 anti-endothelial anti-endothelial ADJ JJ Degree=Pos _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 patient patient NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 Takayasu Takayasu PROPN NNP Number=Sing _ _ _ _ 10 arteritis arteritis PROPN NNPS Number=Plur _ _ _ _ 11 activate activate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 large large ADJ JJ Degree=Pos _ _ _ _ 16 vessels vessel NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 696 # text = OBJECTIVE: 1 OBJECTIVE objective NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 697 # text = To create monoclonal anti-endothelial cell antibodies (mAECA) from a patient with Takayasu arteritis to evaluate their ability to activate human umbilical vein endothelial cells (HUVEC), and to characterize the mechanism of EC activation. 1 To to PART TO _ _ _ _ _ 2 create create VERB VB VerbForm=Inf _ _ _ _ 3 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 4 anti-endothelial anti-endothelial ADJ JJ Degree=Pos _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 mAECA mAECa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 patient patient NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 Takayasu Takayasu PROPN NNP Number=Sing _ _ _ _ 15 arteritis arteritis NOUN NN Number=Sing _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 evaluate evaluate VERB VB VerbForm=Inf _ _ _ _ 18 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 ability ability NOUN NN Number=Sing _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 activate activate VERB VB VerbForm=Inf _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 24 vein vein NOUN NN Number=Sing _ _ _ _ 25 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 HUVEC HUVEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 to to PART TO _ _ _ _ _ 33 characterize characterize VERB VB VerbForm=Inf _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 EC EC PROPN NNP Number=Sing _ _ _ _ 38 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 698 # text = METHODS: A panel of mAECA was generated from peripheral blood lymphocytes of a patient with Takayasu arteritis, using Epstein-Barr virus transformation. 1 METHODS methods NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 panel panel NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 mAECA mAECA PROPN NNP Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 generated generate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 11 blood blood NOUN NN Number=Sing _ _ _ _ 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 patient patient NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 Takayasu Takayasu PROPN NNP Number=Sing _ _ _ _ 18 arteritis arteritis NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 using use VERB VBG VerbForm=Ger _ _ _ _ 21 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 Barr Barr PROPN NNP Number=Sing _ _ _ _ 24 virus virus NOUN NN Number=Sing _ _ _ _ 25 transformation transformation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 699 # text = Activity against macrovascular EC (HUVEC) and microvascular EC (human bone marrow EC immortalized by SV40) antigens was detected by enzyme-linked immunosorbent assay. 1 Activity activity NOUN NN Number=Sing _ _ _ _ 2 against against ADP IN _ _ _ _ _ 3 macrovascular macrovascular ADJ JJ Degree=Pos _ _ _ _ 4 EC EC PROPN NNP Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 HUVEC HUVEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 microvascular microvascular ADJ JJ Degree=Pos _ _ _ _ 10 EC EC PROPN NNP Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 bone bone NOUN NN Number=Sing _ _ _ _ 14 marrow marrow NOUN NN Number=Sing _ _ _ _ 15 EC EC PROPN NNP Number=Sing _ _ _ _ 16 immortalized immortalize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 SV40 SV40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 antigens antigen NOUN NNS Number=Plur _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 enzyme enzyme NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 -linked -link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 immunosorbent immunosorbent ADJ JJ Degree=Pos _ _ _ _ 27 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 700 # text = Inhibition studies were used to select the monoclonal antibodies (mAECA) which share the same EC epitope binding specificity as the total IgG-AECA from the Takayasu arteritis patient. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 select select VERB VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 9 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 mAECA mAECA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 share share VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 same same ADJ JJ Degree=Pos _ _ _ _ 17 EC Ec NOUN NN Number=Sing _ _ _ _ 18 epitope epitope NOUN NN Number=Sing _ _ _ _ 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 specificity specificity NOUN NN Number=Sing _ _ _ _ 21 as as ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 total total ADJ JJ Degree=Pos _ _ _ _ 24 IgG IgG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 AECA AECA PROPN NNP Number=Sing _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 Takayasu Takayasu PROPN NNP Number=Sing _ _ _ _ 30 arteritis arteritis NOUN NN Number=Sing _ _ _ _ 31 patient patient NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 701 # text = The binding of the mAECA to human aortic EC was studied by immunohistochemistry. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 binding binding NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 mAECA mAECa PROPN NNP Number=Sing _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 human human VERB VB VerbForm=Inf _ _ _ _ 8 aortic aortic ADJ JJ Degree=Pos _ _ _ _ 9 EC Ec PROPN NNP Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 immunohistochemistry immunohistochemistry NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 702 # text = The secretion levels of interleukin-6 (IL-6) and von Willebrand factor (vWF) were determined, to serve as markers for EC activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 secretion secretion NOUN NN Number=Sing _ _ _ _ 3 levels level NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 6 6 NUM CD NumType=Card _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 von von PROPN NNP Number=Sing _ _ _ _ 15 Willebrand Willebrand PROPN NNP Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 vWF vWF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 determined determined ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 serve serve VERB VB VerbForm=Inf _ _ _ _ 25 as as ADP IN _ _ _ _ _ 26 markers marker NOUN NNS Number=Plur _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 EC EC PROPN NNP Number=Sing _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 703 # text = The activated EC were examined for the adherence of a monocytic cell line (U937), as well as for expression of vascular cell adhesion molecule 1, intercellular adhesion molecule 1, and E-selectin. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activated activated VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 EC Ec PROPN NNP Number=Sing _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 adherence adherence NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 line line NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 U937 U937 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 as as ADV RB _ _ _ _ _ 19 well well ADV RB Degree=Pos _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 27 molecule molecule NOUN NN Number=Sing _ _ _ _ 28 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 intercellular intercellular ADJ JJ Degree=Pos _ _ _ _ 31 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 32 molecule molecule NOUN NN Number=Sing _ _ _ _ 33 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 E- E- NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 selectin selectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 704 # text = In addition, nuclear extracts of the mAECA-treated EC were analyzed for the induction of translocation of nuclear factor kappaB (NF-kappaB), using a specific NF-kappaB oligoprobe in an electrophoretic mobility shift assay. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 extracts extract NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 mAECA mAECA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 EC Ec PROPN NNP Number=Sing _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 translocation translocation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 using use VERB VBG VerbForm=Ger _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 specific specific ADJ JJ Degree=Pos _ _ _ _ 32 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 35 oligoprobe oligoprobe AUX VB Mood=Imp|VerbForm=Fin _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 39 mobility mobility NOUN NN Number=Sing _ _ _ _ 40 shift shift NOUN NN Number=Sing _ _ _ _ 41 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 705 # text = RESULTS: Six mAECA were selected, the mixture of which produced 100% inhibition of binding of the original IgG (from the patient with Takayasu arteritis) to HUVEC. 1 RESULTS results NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Six six NUM CD NumType=Card _ _ _ _ 4 mAECA maecan NOUN NN Number=Sing _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 selected select VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 mixture mixture NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 produced produce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 100 100 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 % % SYM NN Number=Sing _ _ _ _ 15 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 16 of of SCONJ IN _ _ _ _ _ 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 original original ADJ JJ Degree=Pos _ _ _ _ 21 IgG IgG PROPN NNP Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 from from ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 patient patient NOUN NN Number=Sing _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 Takayasu Takayasu PROPN NNP Number=Sing _ _ _ _ 28 arteritis arteritis NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 HUVEC HUVEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 706 # text = All mAECA possessed high activity against macrovascular EC, but none had significant antimicrovascular EC activity. 1 All all DET DT _ _ _ _ _ 2 mAECA mAECa NOUN NN Number=Sing _ _ _ _ 3 possessed possess VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 high high ADJ JJ Degree=Pos _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 against against ADP IN _ _ _ _ _ 7 macrovascular macrovascular ADJ JJ Degree=Pos _ _ _ _ 8 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 but but CCONJ CC _ _ _ _ _ 11 none none NOUN NN Number=Sing _ _ _ _ 12 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 significant significant ADJ JJ Degree=Pos _ _ _ _ 14 antimicrovascular antimicrovascular ADJ JJ Degree=Pos _ _ _ _ 15 EC EC PROPN NNP Number=Sing _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 707 # text = The mAECA, but not normal human IgG, had anti-human aortic EC activity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mAECA mAECa NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 but but CCONJ CC _ _ _ _ _ 5 not not ADV RB _ _ _ _ _ 6 normal normal ADJ JJ Degree=Pos _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 IgG Igg NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 anti-human anti-human ADJ JJ Degree=Pos _ _ _ _ 12 aortic aortic ADJ JJ Degree=Pos _ _ _ _ 13 EC EC PROPN NNP Number=Sing _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 708 # text = Four of the 6 mAECA activated EC, manifested by increased IL-6 and vWF secretion. 1 Four four NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 6 6 NUM CD NumType=Card _ _ _ _ 5 mAECA mAECA PROPN NNP Number=Sing _ _ _ _ 6 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 manifested manifest VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 6 6 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 vWF vwf NOUN NN Number=Sing _ _ _ _ 17 secretion secretion NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 709 # text = The 4 mAECA induced EC expression of adhesion molecules and increased adhesion of U937 monocytic cells to EC. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 4 4 NUM CD NumType=Card _ _ _ _ 3 mAECA mAECa NOUN NN Number=Sing _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 EC EC PROPN NNP Number=Sing _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 9 molecules molecule NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 U937 U937 NUM CD NumType=Card _ _ _ _ 15 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 710 # text = In addition, these mAECA stimulated the nuclear translocation of the NF-kappaB transcription factor. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 mAECA mAECA PROPN NNP Number=Sing _ _ _ _ 6 stimulated stimulate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 translocation translocation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 711 # text = CONCLUSION: 1 CONCLUSION conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 712 # text = Our findings suggest that AECA may directly stimulate EC in Takayasu arteritis through elevation of adhesion molecule expression associated with NF-kappaB activation and adhesion of monocytes, and may therefore play a pathogenic role in the development of the vasculopathy in Takayasu arteritis. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 AECA AECA PROPN NNP Number=Sing _ _ _ _ 6 may may AUX MD VerbForm=Fin _ _ _ _ 7 directly directly ADV RB _ _ _ _ _ 8 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 9 EC EC PROPN NNP Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 Takayasu Takayasu PROPN NNP Number=Sing _ _ _ _ 12 arteritis arteritis ADV RB _ _ _ _ _ 13 through through ADP IN _ _ _ _ _ 14 elevation elevation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 17 molecule molecule NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 may may AUX MD VerbForm=Fin _ _ _ _ 32 therefore therefore ADV RB _ _ _ _ _ 33 play play VERB VB VerbForm=Inf _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 pathogenic pathogenic ADJ JJ Degree=Pos _ _ _ _ 36 role role NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 development development NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 vasculopathy vasculopathy NOUN NN Number=Sing _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 Takayasu Takayasu PROPN NNP Number=Sing _ _ _ _ 45 arteritis arteritis NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 713 # text = Document 003002246 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002246 003002246 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 714 # text = Coexpression of NF-kappa B/Rel and Sp1 transcription factors in human immunodeficiency virus 1-induced, dendritic cell-T-cell syncytia. 1 Coexpression Coexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 Rel Rel PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ _ 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT : _ _ _ _ SpaceAfter=No 19 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 dendritic dendritic ADJ JJ Degree=Pos _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 -T -t NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 syncytia syncytia NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 715 # text = Productive infection of T cells with human immunodeficiency virus 1 (HIV-1) typically requires that the T cells be stimulated with antigens or mitogens. 1 Productive Productive ADJ JJ Degree=Pos _ _ _ _ 2 infection infection NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 9 virus virus NOUN NN Number=Sing _ _ _ _ 10 1 1 NUM CD NumType=Card _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 X LS _ _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 typically typically ADV RB _ _ _ _ _ 17 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 antigens antigen NOUN NNS Number=Plur _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 mitogens mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 716 # text = This requirement has been attributed to the activation of the transcription factor NF-kappa B, which synergizes with the constitutive transcription factor Sp1 to drive the HIV-1 promoter. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 requirement requirement NOUN NN Number=Sing _ _ _ _ 3 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 attributed attribute VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 synergizes synergize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 drive drive VERB VB VerbForm=Inf _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 717 # text = Recently, we have found that vigorous replication of HIV-1 takes place in nonactivated memory T cells after syncytium formation with dendritic cells (DCs). 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 vigorous vigorous ADJ JJ Degree=Pos _ _ _ _ 8 replication replication NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 takes take NOUN NNS Number=Plur _ _ _ _ 14 place place NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 nonactivated nonactivated ADJ JJ Degree=Pos _ _ _ _ 17 memory memory NOUN NN Number=Sing _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 after after ADP IN _ _ _ _ _ 21 syncytium syncytium NOUN NN Number=Sing _ _ _ _ 22 formation formation NOUN NN Number=Sing _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 dendritic dendritic ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 DCs DC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 718 # text = These syncytia lack activated cells as determined by an absence of staining for Ki-67 cell cycle antigen. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 syncytia syncytia NOUN NN Number=Sing _ _ _ _ 3 lack lack NOUN NN Number=Sing _ _ _ _ 4 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 as as SCONJ IN _ _ _ _ _ 7 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 absence absence NOUN NN Number=Sing _ _ _ _ 11 of of SCONJ IN _ _ _ _ _ 12 staining stain VERB VBG VerbForm=Ger _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 Ki Ki PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 -67 -67 NUM CD NumType=Card _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 cycle cycle NOUN NN Number=Sing _ _ _ _ 18 antigen antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 719 # text = The expression and activity of NF-kappa B and Sp1 were, therefore, analyzed in isolated T cells and DCs from humans and mice. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 activity activity NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B B PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 therefore therefore ADV RB _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 DCs DC NOUN NNS Number=Plur _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 humans human NOUN NNS Number=Plur _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 720 # text = We have used immunolabeling, Western blot analysis, and electrophoretic mobility shift and supershift assays. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 immunolabeling immunolabeling NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 Western western ADJ JJ Degree=Pos _ _ _ _ 7 blot blot NOUN NN Number=Sing _ _ _ _ 8 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 12 mobility mobility NOUN NN Number=Sing _ _ _ _ 13 shift shift NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 supershift supershift NOUN NN Number=Sing _ _ _ _ 16 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 721 # text = T cells lack active NF-kappa B but express Sp1 as expected. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 lack lack VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 active active ADJ JJ Degree=Pos _ _ _ _ 5 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 express express ADJ JJ Degree=Pos _ _ _ _ 11 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 12 as as SCONJ IN _ _ _ _ _ 13 expected expect VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 722 # text = DCs express high levels of all known NF-kappa B and Rel proteins, with activity residing primarily within RelB, p50, and p65. 1 DCs DC NOUN NNS Number=Plur _ _ _ _ 2 express express ADJ JJ Degree=Pos _ _ _ _ 3 high high ADJ JJ Degree=Pos _ _ _ _ 4 levels level NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 all all DET DT _ _ _ _ _ 7 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B b PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 Rel Rel PROPN NNP Number=Sing _ _ _ _ 14 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 with with SCONJ IN _ _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 residing reside VERB VBG VerbForm=Ger _ _ _ _ 19 primarily primarily ADV RB _ _ _ _ _ 20 within within ADP IN _ _ _ _ _ 21 RelB RelB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 723 # text = However, DCs lack Sp1, which may explain the failure of HIV-1 to replicate in purified DCs. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 DCs Dcs PROPN NNP Number=Sing _ _ _ _ 4 lack lack NOUN NN Number=Sing _ _ _ _ 5 Sp1 Sp1 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 may may AUX MD VerbForm=Fin _ _ _ _ 9 explain explain VERB VB VerbForm=Inf _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 failure failure NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 replicate replicate VERB VB VerbForm=Inf _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 DCs DC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 724 # text = Coexpression of NF-kappa B and Sp1 occurs in the heterologous DC-T-cell syncytia that are induced by HIV-1. 1 Coexpression Coexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B b PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 Sp1 sp1 NUM CD NumType=Card _ _ _ _ 9 occurs occur NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 13 DC DC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 T T PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 syncytia syncytia NOUN NN Number=Sing _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 725 # text = Therefore, HIV-1-induced cell fusion brings together factors that upregulate virus transcription. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 -induced -induced ADJ JJ Degree=Pos _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 fusion fusion NOUN NN Number=Sing _ _ _ _ 9 brings bring VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 together together ADJ JJ Degree=Pos _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 upregulate upregulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 virus virus NOUN NN Number=Sing _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 726 # text = Since DCs and memory T cells frequently traffic together in situ, these unusual heterologous syncytia could develop in infected individuals and lead to chronic HIV-1 replication without ostensible immune stimulation. 1 Since since SCONJ IN _ _ _ _ _ 2 DCs DC NOUN NNS Number=Plur _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 memory memory NOUN NN Number=Sing _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 frequently frequently ADV RB _ _ _ _ _ 8 traffic traffic NOUN NN Number=Sing _ _ _ _ 9 together together ADV RB _ _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 situ situ NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 14 unusual unusual ADJ JJ Degree=Pos _ _ _ _ 15 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 16 syncytia syncytia NOUN NN Number=Sing _ _ _ _ 17 could could AUX MD VerbForm=Fin _ _ _ _ 18 develop develop VERB VB VerbForm=Inf _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 infected infected ADJ JJ Degree=Pos _ _ _ _ 21 individuals individual NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 lead lead VERB VB VerbForm=Inf _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 chronic chronic PROPN NNP Number=Sing _ _ _ _ 26 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 replication replication NOUN NN Number=Sing _ _ _ _ 30 without without ADP IN _ _ _ _ _ 31 ostensible ostensible ADJ JJ Degree=Pos _ _ _ _ 32 immune immune ADJ JJ Degree=Pos _ _ _ _ 33 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 727 # text = Document 003002252 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002252 003002252 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 728 # text = Possible differences in the mechanism(s) of action of different glucocorticoid hormone compounds. 1 Possible possible ADJ JJ Degree=Pos _ _ _ _ 2 differences difference NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 s s X AFX _ _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 action action NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 different different ADJ JJ Degree=Pos _ _ _ _ 13 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 14 hormone hormone NOUN NN Number=Sing _ _ _ _ 15 compounds compound NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 729 # text = Different glucocorticoid hormones (GCH) show differences in the intensity and in the kinetics of their immunomodulating activity. 1 Different different ADJ JJ Degree=Pos _ _ _ _ 2 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ _ 3 hormones hormone NOUN NNS Number=Plur _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 GCH GCH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 show show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 differences difference NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 intensity intensity NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 immunomodulating immunomodulating ADJ JJ Degree=Pos _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 730 # text = The mechanism(s) of action of GCH is under investigation, but is has been noted that they exert immune activity via the genomic pathway. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 s s X AFX _ _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 action action NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 GCH GCH PROPN NNP Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 under under ADP IN _ _ _ _ _ 12 investigation investigation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 18 noted note VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 21 exert exert VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 immune immune ADJ JJ Degree=Pos _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 via via ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 27 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 731 # text = We have studied the effects of prednisone (PDN), deflazacort (DFC), and dexamethasone (DXM) on the production of cytokines (IL-2, IL-6, TNF-alpha, IL-10) by peripheral T lymphocytes, and the effects on the inhibition of NF-kB DNA binding activity by activated Jurkat cell line. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 studied studie VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 prednisone prednisone NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 PDN PDN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 deflazacort deflazacort NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 DFC DFC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 DXM DXM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 on on ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 production production NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - SYM SYM _ _ _ _ SpaceAfter=No 42 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ _ 44 by by ADP IN _ _ _ _ _ 45 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 46 T t PROPN NNP Number=Sing _ _ _ _ 47 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 effects effect NOUN NNS Number=Plur _ _ _ _ 52 on on ADP IN _ _ _ _ _ 53 the the DET DT Definite=Def|PronType=Art _ _ _ _ 54 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 55 of of ADP IN _ _ _ _ _ 56 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 kB kb PROPN NNP Number=Sing _ _ _ _ 59 DNA dna NOUN NN Number=Sing _ _ _ _ 60 binding bind VERB VBG VerbForm=Ger _ _ _ _ 61 activity activity NOUN NN Number=Sing _ _ _ _ 62 by by ADP IN _ _ _ _ _ 63 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 64 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 65 cell cell NOUN NN Number=Sing _ _ _ _ 66 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 67 . . PUNCT . _ _ _ _ _ # sent_id = 732 # text = The data obtained show that the three GCH molecules exert an immunosuppression on cytokine production by T lymphocytes and a strong decrease in the nuclear translocation of NF-kB in Jurkat cells; moreover, (a) not all the cytokines investigated were affected, and not with the same intensity, by the three GCH and (b) DXM inhibited the binding activity of NF-kB less than that of DFC and PDN. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 obtained obtain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 show show VERB VB VerbForm=Inf _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 three three NUM CD NumType=Card _ _ _ _ 8 GCH GCh NOUN NN Number=Sing _ _ _ _ 9 molecules molecule NOUN NNS Number=Plur _ _ _ _ 10 exert exert ADP IN Typo=Yes _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 immunosuppression immunosuppression NOUN NN Number=Sing _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 15 production production NOUN NN Number=Sing _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 T T PROPN NNP Number=Sing _ _ _ _ 18 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 strong strong ADJ JJ Degree=Pos _ _ _ _ 22 decrease decrease NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 26 translocation translocation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kB kb PROPN NNP Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 ; ; PUNCT , _ _ _ _ _ 35 moreover moreover ADV RB _ _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 a a X LS _ _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 not not ADV RB _ _ _ _ _ 41 all all DET PDT _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 44 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 46 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 not not ADV RB _ _ _ _ _ 50 with with ADP IN _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 same same ADJ JJ Degree=Pos _ _ _ _ 53 intensity intensity NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 , , PUNCT , _ _ _ _ _ 55 by by ADP IN _ _ _ _ _ 56 the the DET DT Definite=Def|PronType=Art _ _ _ _ 57 three three NUM CD NumType=Card _ _ _ _ 58 GCH GCh NOUN NN Number=Sing _ _ _ _ 59 and and CCONJ CC _ _ _ _ _ 60 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 61 b b X LS _ _ _ _ SpaceAfter=No 62 ) ) PUNCT -RRB- _ _ _ _ _ 63 DXM DXm PRON PRP Case=Acc|Gender=Masc|Number=Sing|Person=3|PronType=Prs _ _ _ _ 64 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 65 the the DET DT Definite=Def|PronType=Art _ _ _ _ 66 binding bind VERB VBG VerbForm=Ger _ _ _ _ 67 activity activity NOUN NN Number=Sing _ _ _ _ 68 of of ADP IN _ _ _ _ _ 69 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 70 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 71 kB kb PROPN NNP Number=Sing _ _ _ _ 72 less less ADJ JJR Degree=Cmp _ _ _ _ 73 than than ADP IN _ _ _ _ _ 74 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 75 of of ADP IN _ _ _ _ _ 76 DFC DFC PROPN NNP Number=Sing _ _ _ _ 77 and and CCONJ CC _ _ _ _ _ 78 PDN PDN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 79 . . PUNCT . _ _ _ _ _ # sent_id = 733 # text = These data are in agreement with the concept that different GCH compounds might differ in their binding and affinity properties, tissue-specific metabolism, and interaction with transcription factor. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 agreement agreement NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 concept concept NOUN NN Number=Sing _ _ _ _ 9 that that ADV WRB PronType=Rel _ _ _ _ 10 different different ADJ JJ Degree=Pos _ _ _ _ 11 GCH GCh NOUN NN Number=Sing _ _ _ _ 12 compounds compound NOUN NNS Number=Plur _ _ _ _ 13 might might AUX MD VerbForm=Fin _ _ _ _ 14 differ differ VERB VB VerbForm=Inf _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 17 binding binding NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 affinity affinity NOUN NN Number=Sing _ _ _ _ 20 properties property NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 tissue- tissue- SYM NFP _ _ _ _ SpaceAfter=No 23 specific specific ADJ JJ Degree=Pos _ _ _ _ 24 metabolism metabolism NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 interaction interaction NOUN NN Number=Sing _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 734 # text = Document 003002253 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002253 003002253 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 735 # text = Abnormal NF-kappa B activity in T lymphocytes from patients with systemic lupus erythematosus is associated with decreased p65-RelA protein expression. 1 Abnormal abnormal PROPN NNP Number=Sing _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 kappa kappa X FW Foreign=Yes _ _ _ _ 5 B b ADJ JJ Degree=Pos _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 patients patient NOUN NNS Number=Plur _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 systemic systemic ADJ JJ Degree=Pos _ _ _ _ 14 lupus lupus NOUN NN Number=Sing _ _ _ _ 15 erythematosus erythematosus NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 RelA Rela NOUN NN Number=Sing _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 736 # text = Numerous cellular and biochemical abnormalities in immune regulation have been described in patients with systemic lupus erythematosus (SLE), including surface 1 Numerous numerous ADJ JJ Degree=Pos _ _ _ _ 2 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 5 abnormalities abnormality NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 immune immune ADJ JJ Degree=Pos _ _ _ _ 8 regulation regulation NOUN NN Number=Sing _ _ _ _ 9 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 11 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 patients patient NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 systemic systemic ADJ JJ Degree=Pos _ _ _ _ 16 lupus lupus NOUN NN Number=Sing _ _ _ _ 17 erythematosus erythematosus NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 SLE Sle NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 including include VERB VBG VerbForm=Ger _ _ _ _ 23 surface surface NOUN NN Number=Sing _ _ _ _ # sent_id = 737 # text = Ag receptor-initiated signaling events and lymphokine production. 1 Ag ag VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 initiated initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 signaling signaling VERB VBG VerbForm=Ger _ _ _ _ 6 events event NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 9 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 738 # text = Because NF-kappa B contributes to the transcription of numerous inflammatory genes and has been shown to be a molecular target of antiinflammatory drugs, we sought to characterize the functional role of the NF-kappa B protein complex in lupus T cells. 1 Because because SCONJ IN _ _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa PROPN NNP Number=Sing _ _ _ _ 5 B b PROPN NNP Number=Sing _ _ _ _ 6 contributes contribute VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 numerous numerous ADJ JJ Degree=Pos _ _ _ _ 12 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 17 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 22 target target NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 antiinflammatory antiinflammatory ADJ JJ Degree=Pos _ _ _ _ 25 drugs drug NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 28 sought seek VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 to to PART TO _ _ _ _ _ 30 characterize characterize VERB VB VerbForm=Inf _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 functional functional ADJ JJ Degree=Pos _ _ _ _ 33 role role NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 kappa kappa NOUN NN Number=Sing _ _ _ _ 39 B b NOUN NN Number=Sing _ _ _ _ 40 protein protein NOUN NN Number=Sing _ _ _ _ 41 complex complex NOUN NN Number=Sing _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 lupus lupus ADJ JJ Degree=Pos _ _ _ _ 44 T t PROPN NNP Number=Sing _ _ _ _ 45 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 739 # text = Freshly isolated T cells from lupus patients, rheumatoid arthritis (RA) patients, and normal individuals were activated physiologically via the TCR with anti-CD3 and anti-CD28 1 Freshly freshly ADV RB _ _ _ _ _ 2 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 lupus lupus NOUN NN Number=Sing _ _ _ _ 7 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 rheumatoid rheumatoid ADJ JJ Degree=Pos _ _ _ _ 10 arthritis arthritis NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 normal normal ADJ JJ Degree=Pos _ _ _ _ 18 individuals individual NOUN NNS Number=Plur _ _ _ _ 19 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 physiologically physiologically ADV RB _ _ _ _ _ 22 via via ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 TCR Tcr NOUN NN Number=Sing _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 anti-CD28 anti-CD28 NUM CD NumType=Card _ _ _ _ # sent_id = 740 # text = Abs to assess proximal membrane signaling, and with PMA and a calcium ionophore (A23187) to bypass membrane-mediated signaling events. 1 Abs Ab NOUN NNS Number=Plur _ _ _ _ 2 to to PART TO _ _ _ _ _ 3 assess assess VERB VB VerbForm=Inf _ _ _ _ 4 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 5 membrane membrane NOUN NN Number=Sing _ _ _ _ 6 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 PMA Pma PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 calcium calcium NOUN NN Number=Sing _ _ _ _ 14 ionophore ionophore NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 A23187 A23187 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 bypass bypass VERB VB VerbForm=Inf _ _ _ _ 20 membrane membrane NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 signaling signaling NOUN NN Number=Sing _ _ _ _ 24 events event NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 741 # text = We measured the NF-kappa B binding activity in nuclear extracts by gel shift analysis. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 measured measure VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 binding binde VERB VBG VerbForm=Ger _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 extracts extract NOUN NNS Number=Plur _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 gel gel NOUN NN Number=Sing _ _ _ _ 15 shift shift NOUN NN Number=Sing _ _ _ _ 16 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 742 # text = When compared with normal cells, the activation of NF-kappa B activity in SLE patients was significantly decreased in SLE, but not in RA, patients. 1 When when ADV WRB PronType=Int _ _ _ _ 2 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 normal normal ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa PROPN NNP Number=Sing _ _ _ _ 13 B b PROPN NNP Number=Sing _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 SLE Sle ADJ JJ Degree=Pos _ _ _ _ 17 patients patient NOUN NNS Number=Plur _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 significantly significantly ADV RB _ _ _ _ _ 20 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 SLE SLE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 but but CCONJ CC _ _ _ _ _ 25 not not ADV RB _ _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 743 # text = NF-kappa B binding activity was absent in several SLE patients who were not receiving any medication, including corticosteroids. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 binding binde VERB VBG VerbForm=Ger _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 absent absend VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 several several ADJ JJ Degree=Pos _ _ _ _ 11 SLE Sle PROPN NNP Number=Sing _ _ _ _ 12 patients patient NOUN NNS Number=Plur _ _ _ _ 13 who who PRON WP PronType=Rel _ _ _ _ 14 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 receiving receive VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 17 any any DET DT _ _ _ _ _ 18 medication medication NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 including include VERB VBG VerbForm=Ger _ _ _ _ 21 corticosteroids corticosteroid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 744 # text = Also, NF-kappa B activity remained absent in follow-up studies. 1 Also also ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B b PROPN NNP Number=Sing _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 absent absent NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 follow follow NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 up up NOUN NN Number=Sing _ _ _ _ 14 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 745 # text = In supershift experiments using specific Abs, we showed that, in the group of SLE patients who displayed undetectable NF-kappa B activity, p65 complexes were not formed. 1 In in ADP IN _ _ _ _ _ 2 supershift supershift ADJ JJ Degree=Pos _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ _ 4 using use VERB VBG VerbForm=Ger _ _ _ _ 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 Abs Ab NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 9 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 group group NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 SLE Sle ADJ JJ Degree=Pos _ _ _ _ 17 patients patient NOUN NNS Number=Plur _ _ _ _ 18 who who PRON WP PronType=Rel _ _ _ _ 19 displayed display VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 undetectable undetectable ADJ JJ Degree=Pos _ _ _ _ 21 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa NOUN NN Number=Sing _ _ _ _ 24 B b NOUN NN Number=Sing _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 p65 p65 NUM CD NumType=Card _ _ _ _ 28 complexes complexe NOUN NNS Number=Plur _ _ _ _ 29 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 not not PART RB _ _ _ _ _ 31 formed form VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 746 # text = Finally, immunoblot analysis of nuclear extracts showed decreased or absent p65 protein levels. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 immunoblot immunoblot ADJ JJ Degree=Pos _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 extracts extract NOUN NNS Number=Plur _ _ _ _ 8 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 absent absent VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 p65 p65 NUM CD NumType=Card _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 747 # text = As p65 complexes are transcriptionally active in comparison to the p50 homodimer, this novel finding may provide insight on the origin of abnormal cytokine or other gene transcription in SLE patients. 1 As as ADP IN _ _ _ _ _ 2 p65 p65 NUM CD NumType=Card _ _ _ _ 3 complexes complexe NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 transcriptionally transcriptionally ADV RB _ _ _ _ _ 6 active active ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 comparison comparison NOUN NN Number=Sing _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 p50 p50 NOUN NN Number=Sing _ _ _ _ 12 homodimer homodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 15 novel novel NOUN NN Number=Sing _ _ _ _ 16 finding finding NOUN NN Number=Sing _ _ _ _ 17 may may AUX MD VerbForm=Fin _ _ _ _ 18 provide provide VERB VB VerbForm=Inf _ _ _ _ 19 insight insight NOUN NN Number=Sing _ _ _ _ 20 on on ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 origin origin NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 abnormal abnormal ADJ JJ Degree=Pos _ _ _ _ 25 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 other other ADJ JJ Degree=Pos _ _ _ _ 28 gene gene ADJ JJ Degree=Pos _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 SLE Sle ADJ JJ Degree=Pos _ _ _ _ 32 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 748 # text = Document 003002268 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002268 003002268 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 749 # text = Apoptosis-resistant T cells have a deficiency in NF-kappaB-mediated induction of Fas ligand transcription. 1 Apoptosis Apoptosis PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 deficiency deficiency NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 kappaB- kappaB- SYM SYM _ _ _ _ SpaceAfter=No 13 mediated mediated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 induction induction NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 Fas Fas PROPN NNP Number=Sing _ _ _ _ 17 ligand ligand NOUN NN Number=Sing _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 750 # text = Apoptosis induced through the TCR in CD4+ T cells is mostly mediated by the inducible expression of Fas ligand (FasL) as a primary event leading to the commitment to death. 1 Apoptosis Apoptosis PROPN NNP Number=Sing _ _ _ _ 2 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 through through ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 TCR Tcr NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 + + SYM SYM _ _ _ _ _ 9 T t NUM CD NumType=Card _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 mostly mostly ADV RB _ _ _ _ _ 13 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 Fas Fas PROPN NNPS Number=Plur _ _ _ _ 20 ligand ligand NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 FasL Fasl INTJ UH _ _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 primary primary ADJ JJ Degree=Pos _ _ _ _ 27 event event NOUN NN Number=Sing _ _ _ _ 28 leading lead VERB VBG VerbForm=Ger _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 commitment commitment NOUN NN Number=Sing _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 751 # text = To gain a better understanding of the transcriptional events that regulate this expression, we took advantage of our previously described mutant Jurkat cells. 1 To to PART TO _ _ _ _ _ 2 gain gain VERB VB VerbForm=Inf _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 better better ADJ JJR Degree=Cmp _ _ _ _ 5 understanding understanding NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 events event NOUN NNS Number=Plur _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 16 took take VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 advantage advantage NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 20 previously previously ADV RB _ _ _ _ _ 21 described describe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 23 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 752 # text = These cells are deficient in FasL expression and apoptosis induced upon TCR triggering, although their cytokine (IL-2 and IFN-gamma) production is normal. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 FasL Fasl ADJ JJ Degree=Pos _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 upon upon ADP IN _ _ _ _ _ 12 TCR Tcr NOUN NN Number=Sing _ _ _ _ 13 triggering triggering NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 although although SCONJ IN _ _ _ _ _ 16 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 17 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 production production NOUN NN Number=Sing _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 normal normal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 753 # text = Here we show that both a FasL- and a consensus NF-kappaB- reporter construct are inefficiently induced in these cells compared to wild-type cells. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 both both DET DT _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 FasL Fasl NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 consensus consensus NOUN NN Number=Sing _ _ _ _ 12 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ _ 16 reporter reporter NOUN NN Number=Sing _ _ _ _ 17 construct construct NOUN NN Number=Sing _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 inefficiently inefficiently ADV RB _ _ _ _ _ 20 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 type type NOUN NN Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 754 # text = In addition, we demonstrate that the inducible transcriptional activity of the FasL reporter is abolished by specific inhibitors of NF-kappaB activation. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 9 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 FasL Fasl ADJ JJ Degree=Pos _ _ _ _ 14 reporter reporter NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 abolished abolish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 specific specific ADJ JJ Degree=Pos _ _ _ _ 19 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 755 # text = Thus, we could trace the deficit of the mutant cells to an inefficient NF-kappaB activation, evidencing a relevant role for NF-kappaB in the regulation of FasL expression in activated T cells. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 could could AUX MD VerbForm=Fin _ _ _ _ 5 trace trace VERB VB VerbForm=Inf _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 deficit deficit NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 inefficient inefficient ADJ JJ Degree=Pos _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 evidencing evidence VERB VBG VerbForm=Ger _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 23 role role NOUN NN Number=Sing _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 regulation regulation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 FasL Fasl ADJ JJ Degree=Pos _ _ _ _ 33 expression expression NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 T t PROPN NNP Number=Sing _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 756 # text = Furthermore, our results suggest that the induction of FasL versus cytokine gene expression is differentially sensitive to NF-kappaB deprivation. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 induction induction NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 FasL Fasl NOUN NN Number=Sing _ _ _ _ 11 versus versus ADP IN _ _ _ _ _ 12 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 differentially differentially ADV RB _ _ _ _ _ 17 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 22 deprivation deprivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 757 # text = Document 003002274 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002274 003002274 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 758 # text = cAMP-dependent regulation of proenkephalin by JunD and JunB: positive and negative effects of AP-1 proteins. 1 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 proenkephalin proenkephalin NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 JunD JunD PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 JunB JunB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 : : PUNCT : _ _ _ _ _ 12 positive positive ADJ JJ Degree=Pos _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 negative negative ADJ JJ Degree=Pos _ _ _ _ 15 effects effect NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 759 # text = We demonstrate that JunD, a component of the AP-1 transcription factor complex, activates transcription of the human proenkephalin gene in a fashion that is completely dependent upon the cAMP-dependent protein kinase, protein kinase A. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 JunD JunD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 component component NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 proenkephalin proenkephalin NOUN NN Number=Sing _ _ _ _ 23 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 fashion fashion NOUN NN Number=Sing _ _ _ _ 27 that that PRON WDT PronType=Rel _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 completely completely ADV RB _ _ _ _ _ 30 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 31 upon upon ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 36 protein protein NOUN NN Number=Sing _ _ _ _ 37 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 protein protein NOUN NN Number=Sing _ _ _ _ 40 kinase kinase NOUN NN Number=Sing _ _ _ _ 41 A A NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 760 # text = Activation of proenkephalin transcription by JunD is dependent upon a previously characterized cAMP-, phorbol ester-, and Ca(2+)-inducible enhancer, and JunD is shown to bind the enhancer as a homodimer. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 proenkephalin proenkephalin NOUN NN Number=Sing _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 JunD JunD PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 9 upon upon ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 previously previously ADV RB _ _ _ _ _ 12 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 17 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 Ca Ca PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 +) +) SYM NFP _ _ _ _ SpaceAfter=No 25 - - SYM SYM _ _ _ _ SpaceAfter=No 26 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 27 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 JunD JunD PROPN NNP Number=Sing _ _ _ _ 31 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 to to PART TO _ _ _ _ _ 34 bind bind VERB VB VerbForm=Inf _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 37 as as ADP IN _ _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 homodimer homodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 761 # text = Another component of the AP-1 transcription complex, JunB, is shown to inhibit activation mediated by JunD. 1 Another another DET DT _ _ _ _ _ 2 component component NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 JunB JunB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 JunD JunD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 762 # text = As a homodimer JunB is unable to bind the enhancer; however in the presence of c-Fos, high-affinity binding is observed. 1 As as ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 homodimer homodimer NOUN NN Number=Sing _ _ _ _ 4 JunB JunB PROPN NNP Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 unable unable ADJ JJ Degree=Pos _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 bind bind VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ; ; PUNCT , _ _ _ _ _ 12 however however ADV RB _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 presence presence NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 Fos Fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 affinity affinity NOUN NN Number=Sing _ _ _ _ 24 binding binding NOUN NN Number=Sing _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 763 # text = Furthermore, JunD is shown to activate transcription of genes linked to both cAMP and phorbol ester response elements in a protein kinase A-dependent fashion, further blurring the distinction between these response elements. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 JunD JunD PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 activate activate VERB VB VerbForm=Inf _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ _ 11 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 both both DET DT _ _ _ _ _ 14 cAMP camp NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 17 ester ester NOUN NN Number=Sing _ _ _ _ 18 response response NOUN NN Number=Sing _ _ _ _ 19 elements element NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 kinase kinase NOUN NN Number=Sing _ _ _ _ 24 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 27 fashion fashion NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 further further SCONJ IN _ _ _ _ _ 30 blurring blurre VERB VBG VerbForm=Ger _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 distinction distinction NOUN NN Number=Sing _ _ _ _ 33 between between ADP IN _ _ _ _ _ 34 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 35 response response NOUN NN Number=Sing _ _ _ _ 36 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 764 # text = These results demonstrate that the transcriptional activity of an AP-1-related protein is regulated by the cAMP-dependent second-messenger pathway and suggest that JunD and other AP-1-related proteins may play an important role in the regulation of gene expression by cAMP-dependent intracellular signaling pathways. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 related related ADJ JJ Degree=Pos _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 23 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 messenger messenger NOUN NN Number=Sing _ _ _ _ 26 pathway pathway NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 that that SCONJ IN _ _ _ _ _ 30 JunD JunD PROPN NNP Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 other other ADJ JJ Degree=Pos _ _ _ _ 33 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 related relate ADJ JJ Degree=Pos _ _ _ _ 38 proteins protein NOUN NNS Number=Plur _ _ _ _ 39 may may AUX MD VerbForm=Fin _ _ _ _ 40 play play VERB VB VerbForm=Inf _ _ _ _ 41 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 important important ADJ JJ Degree=Pos _ _ _ _ 43 role role NOUN NN Number=Sing _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 regulation regulation NOUN NN Number=Sing _ _ _ _ 47 of of ADP IN _ _ _ _ _ 48 gene gene NOUN NN Number=Sing _ _ _ _ 49 expression expression NOUN NN Number=Sing _ _ _ _ 50 by by ADP IN _ _ _ _ _ 51 cAMP camp NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 - - PUNCT , _ _ _ _ SpaceAfter=No 53 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 54 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 55 signaling signaling NOUN NN Number=Sing _ _ _ _ 56 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 765 # text = Document 003002277 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002277 003002277 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 766 # text = Triggering of the human interleukin-6 gene by interferon-gamma and tumor necrosis factor-alpha in monocytic cells involves cooperation between interferon regulatory factor-1, NF kappa B, and Sp1 transcription factors. 1 Triggering Triggering ADP IN _ _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 6 6 NUM CD NumType=Card _ _ _ _ 8 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 gamma gamma NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 tumor tumor NOUN NN Number=Sing _ _ _ _ 15 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 alpha alpha NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 cooperation cooperation NOUN NN Number=Sing _ _ _ _ 24 between between ADP IN _ _ _ _ _ 25 interferon interferon ADJ JJ Degree=Pos _ _ _ _ 26 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 NF NF PROPN NNP Number=Sing _ _ _ _ 31 kappa kappa PROPN NNP Number=Sing _ _ _ _ 32 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 36 transcription transcription NOUN NN Number=Sing _ _ _ _ 37 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 767 # text = We investigated the molecular basis of the synergistic induction by interferon-gamma (IFN-gamma)/tumor necrosis factor-alpha (TNF-alpha) of human interleukin-6 (IL-6) gene in THP-1 monocytic cells, and compared it with the basis of this induction by lipopolysaccharide (LPS). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 5 basis basis NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 interferon interferon ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 gamma gamma NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 / / PUNCT , _ _ _ _ SpaceAfter=No 20 tumor tumor NOUN NN Number=Sing _ _ _ _ 21 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 alpha alpha NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 human human ADJ JJ Degree=Pos _ _ _ _ 32 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 6 6 NUM CD NumType=Card _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 gene gene NOUN NN Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 THP THP NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT , _ _ _ _ SpaceAfter=No 44 1 1 NUM CD NumType=Card _ _ _ _ 45 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 46 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 it it PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 51 with with ADP IN _ _ _ _ _ 52 the the DET DT Definite=Def|PronType=Art _ _ _ _ 53 basis basis NOUN NN Number=Sing _ _ _ _ 54 of of ADP IN _ _ _ _ _ 55 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 56 induction induction NOUN NN Number=Sing _ _ _ _ 57 by by ADP IN _ _ _ _ _ 58 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 59 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 60 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 61 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 62 . . PUNCT . _ _ _ _ _ # sent_id = 768 # text = Functional studies with IL-6 promoter demonstrated that three regions are the targets of the IFN-gamma and/or TNF-alpha action, whereas only one of these regions seemed to be implicated in LPS activation. 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 6 6 NUM CD NumType=Card _ _ _ _ 7 promoter promoter NOUN NN Number=Sing _ _ _ _ 8 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 three three NUM CD NumType=Card _ _ _ _ 11 regions region NOUN NNS Number=Plur _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 targets target NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 gamma gamma NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 or or CCONJ CC _ _ _ _ _ 23 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 alpha alpha NOUN NN Number=Sing _ _ _ _ 26 action action NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 whereas whereas SCONJ IN _ _ _ _ _ 29 only only ADV RB _ _ _ _ _ 30 one one NUM CD NumType=Card _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 33 regions region NOUN NNS Number=Plur _ _ _ _ 34 seemed seem VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 be be AUX VB VerbForm=Inf _ _ _ _ 37 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 40 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 769 # text = The three regions concerned are: 1) a region between -73 and -36, which is the minimal element inducible by LPS or TNF-alpha; 2) an element located between -181 and -73, which appeared to regulate the response to IFN-gamma and TNF-alpha negatively; and 3) a distal element upstream of -224, which was inducible by IFN-gamma alone. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 three three NUM CD NumType=Card _ _ _ _ 3 regions region NOUN NNS Number=Plur _ _ _ _ 4 concerned concern ADJ JJ Degree=Pos _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 6 : : PUNCT : _ _ _ _ _ 7 1 1 X LS _ _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 region region NOUN NN Number=Sing _ _ _ _ 11 between between ADP IN _ _ _ _ _ 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 73 73 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 - - SYM SYM _ _ _ _ SpaceAfter=No 16 36 36 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 22 element element NOUN NN Number=Sing _ _ _ _ 23 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 LPS Lp PROPN NNP Number=Sing _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 TNF Tnf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ; ; PUNCT , _ _ _ _ _ 31 2 2 X LS _ _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 element element NOUN NN Number=Sing _ _ _ _ 35 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 between between ADP IN _ _ _ _ _ 37 - - SYM SYM _ _ _ _ SpaceAfter=No 38 181 181 NUM CD NumType=Card _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 - - SYM SYM _ _ _ _ SpaceAfter=No 41 73 73 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 which which PRON WDT PronType=Rel _ _ _ _ 44 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 45 to to PART TO _ _ _ _ _ 46 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 response response NOUN NN Number=Sing _ _ _ _ 49 to to ADP IN _ _ _ _ _ 50 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 gamma gamma NOUN NN Number=Sing _ _ _ _ 53 and and CCONJ CC _ _ _ _ _ 54 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 56 alpha alpha NOUN NN Number=Sing _ _ _ _ 57 negatively negatively ADV RB _ _ _ _ SpaceAfter=No 58 ; ; PUNCT , _ _ _ _ _ 59 and and CCONJ CC _ _ _ _ _ 60 3 3 X LS _ _ _ _ SpaceAfter=No 61 ) ) PUNCT -RRB- _ _ _ _ _ 62 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 63 distal distal ADJ JJ Degree=Pos _ _ _ _ 64 element element NOUN NN Number=Sing _ _ _ _ 65 upstream upstream NOUN NN Number=Sing _ _ _ _ 66 of of ADP IN _ _ _ _ _ 67 - - SYM SYM _ _ _ _ SpaceAfter=No 68 224 224 NUM CD NumType=Card _ _ _ SpaceAfter=No 69 , , PUNCT , _ _ _ _ _ 70 which which PRON WDT PronType=Rel _ _ _ _ 71 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 72 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 73 by by ADP IN _ _ _ _ _ 74 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 75 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 76 gamma gamma NOUN NN Number=Sing _ _ _ _ 77 alone alone ADV RB _ _ _ _ SpaceAfter=No 78 . . PUNCT . _ _ _ _ _ # sent_id = 770 # text = LPS signaling was found to involve NF kappa B activation by the p50/p65 heterodimers. 1 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 2 signaling signaling NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 involve involve VERB VB VerbForm=Inf _ _ _ _ 7 NF NF ADP RP _ _ _ _ _ 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 p65 p65 NOUN NN Number=Sing _ _ _ _ 16 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 771 # text = Synergistic induction of the IL-6 gene by IFN-gamma and TNF-alpha, in monocytic cells, involved cooperation between the IRF-1 and NF kappa B p65 homodimers with concomitant removal of the negative effect of the retinoblastoma control element present in the IL-6 promoter. 1 Synergistic Synergistic ADJ JJ Degree=Pos _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 6 6 NUM CD NumType=Card _ _ _ _ 8 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 IFN IFN NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 gamma gamma NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 involved involve ADJ JJ Degree=Pos _ _ _ _ 23 cooperation cooperation NOUN NN Number=Sing _ _ _ _ 24 between between ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 IRF Irf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 NF Nf PROPN NNP Number=Sing _ _ _ _ 31 kappa kappa PROPN NNP Number=Sing _ _ _ _ 32 B b PROPN NNP Number=Sing _ _ _ _ 33 p65 p65 NUM CD NumType=Card _ _ _ _ 34 homodimers homodimer NOUN NNS Number=Plur _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 concomitant concomitant ADJ JJ Degree=Pos _ _ _ _ 37 removal removal NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 negative negative ADJ JJ Degree=Pos _ _ _ _ 41 effect effect NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 retinoblastoma retinoblastoma NOUN NN Number=Sing _ _ _ _ 45 control control NOUN NN Number=Sing _ _ _ _ 46 element element NOUN NN Number=Sing _ _ _ _ 47 present present ADJ JJ Degree=Pos _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 6 6 NUM CD NumType=Card _ _ _ _ 53 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 772 # text = This removal occurred by activation of the constitutive Sp1 factor, whose increased binding activity and phosphorylation were mediated by IFN-gamma. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 removal removal NOUN NN Number=Sing _ _ _ _ 3 occurred occur VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 9 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 13 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 18 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 gamma gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 773 # text = Document 003002279 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002279 003002279 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 774 # text = Preassociation of STAT1 with STAT2 and STAT3 in separate signalling complexes prior to cytokine stimulation. 1 Preassociation Preassociation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 STAT1 stat1 NUM CD NumType=Card _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 STAT2 Stat2 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 STAT3 STAT3 NUM CD NumType=Card _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 separate separate ADJ JJ Degree=Pos _ _ _ _ 10 signalling signalling NOUN NN Number=Sing _ _ _ _ 11 complexes complex NOUN NNS Number=Plur _ _ _ _ 12 prior prior ADJ JJ Degree=Pos _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 cytokine cytokine VERB VB VerbForm=Inf _ _ _ _ 15 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 775 # text = A variety of cytokines and growth factors act through an induction of gene expression mediated by a family of latent transcription factors called STAT (signal transducers and activators of transcription) proteins. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 variety variety NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 growth growth NOUN NN Number=Sing _ _ _ _ 7 factors factor NOUN NNS Number=Plur _ _ _ _ 8 act act VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 through through ADP IN _ _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 induction induction NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 family family NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 latent latent ADJ JJ Degree=Pos _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ _ 23 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 STAT Stat NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 signal signal NOUN NN Number=Sing _ _ _ _ 27 transducers transducer NOUN NNS Number=Plur _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 activators activator NOUN NNS Number=Plur _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 776 # text = Ligand-induced tyrosine phosphorylation of the STATs promotes their homodimer and heterodimer formation and subsequent nuclear translocation. 1 Ligand Ligand PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 5 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 STATs STATs PROPN NNPS Number=Plur _ _ _ _ 9 promotes promote VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 11 homodimer homodimer NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 14 formation formation NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 translocation translocation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 777 # text = We demonstrate here that 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ # sent_id = 778 # text = STAT protein heterocomplexes exist prior to cytokine treatment. 1 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 heterocomplexes heterocomplex NOUN NNS Number=Plur _ _ _ _ 4 exist exist VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 prior prior ADJ JJ Degree=Pos _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 cytokine cytokine VERB VB VerbForm=Inf _ _ _ _ 8 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 779 # text = When unstimulated HeLa cells are ruptured in hypotonic buffer without salt or detergent, immunoadsorption of either STAT1 or STAT2 from the resulting cytosol yields coimmunoadsorption of the other STAT protein. 1 When when ADV WRB PronType=Int _ _ _ _ 2 unstimulated unstimulate ADJ JJ Degree=Pos _ _ _ _ 3 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 ruptured rupture VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 hypotonic hypotonic ADJ JJ Degree=Pos _ _ _ _ 9 buffer buffer NOUN NN Number=Sing _ _ _ _ 10 without without ADP IN _ _ _ _ _ 11 salt salt NOUN NN Number=Sing _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 detergent detergent NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 immunoadsorption immunoadsorption NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 either either CCONJ CC _ _ _ _ _ 18 STAT1 STAT1 NUM CD NumType=Card _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 STAT2 STAT2 NUM CD NumType=Card _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 resulting result VERB VBG VerbForm=Ger _ _ _ _ 24 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 25 yields yield NOUN NNS Number=Plur _ _ _ _ 26 coimmunoadsorption coimmunoadsorption NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 other other ADJ JJ Degree=Pos _ _ _ _ 30 STAT STAT NOUN NN Number=Sing _ _ _ _ 31 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 780 # text = Similarly, STAT1-STAT3 heterocomplexes are coimmunoadsorbed from hypotonic cytosol. 1 Similarly similarly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 STAT1 STAT1 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 STAT3 STAT3 NOUN NN Number=Sing _ _ _ _ 6 heterocomplexes heterocomplex NOUN NNS Number=Plur _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 coimmunoadsorbed coimmunoadsor VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 hypotonic hypotonic ADJ JJ Degree=Pos _ _ _ _ 11 cytosol cytosol NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 781 # text = STAT1 and STAT2 or STAT1 and STAT3 translated in reticulocyte lysate spontaneously form heterocomplexes when the translation lysates are mixed at 0 degrees C. Our data suggest that interferon-alpha /beta-induced tyrosine phosphorylation increases the stability of a preexisting, latent, STAT1-STAT2 signaling complex. 1 STAT1 STAT1 NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 STAT2 STAT2 NOUN NN Number=Sing _ _ _ _ 4 or or CCONJ CC _ _ _ _ _ 5 STAT1 STAT1 NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 STAT3 STAT3 NOUN NN Number=Sing _ _ _ _ 8 translated translate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 reticulocyte reticulocyte NOUN NN Number=Sing _ _ _ _ 11 lysate lysate NOUN NN Number=Sing _ _ _ _ 12 spontaneously spontaneously ADV RB _ _ _ _ _ 13 form form ADJ JJ Degree=Pos _ _ _ _ 14 heterocomplexes heterocomplex NOUN NNS Number=Plur _ _ _ _ 15 when when ADV WRB PronType=Int _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 translation translation NOUN NN Number=Sing _ _ _ _ 18 lysates lysate NOUN NNS Number=Plur _ _ _ _ 19 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 mixed mix VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 at at ADP IN _ _ _ _ _ 22 0 0 NUM CD NumType=Card _ _ _ _ 23 degrees degree NOUN NNS Number=Plur _ _ _ _ 24 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ 26 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 27 data data NOUN NN Number=Sing _ _ _ _ 28 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 30 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 alpha alpha NOUN NN Number=Sing _ _ _ _ 33 /beta /beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 -induced -induced VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 tyrosine tyrosine PRON PRP _ _ _ _ _ 36 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 37 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 stability stability NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 preexisting preexisting NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 latent latent NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 STAT1 stat1 NUM CD NumType=Card _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 STAT2 Stat2 NOUN NN Number=Sing _ _ _ _ 49 signaling signaling NOUN NN Number=Sing _ _ _ _ 50 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 782 # text = Newly translated STAT1 binds in equilibrium fashion to STAT2 and STAT3, but we show that STAT2 and STAT3 exist in separate heterocomplexes with STAT1, consistent with a model in which STAT1 contains a common binding site for other STAT proteins. 1 Newly newly ADV RB _ _ _ _ _ 2 translated translate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 STAT1 stat1 NUM CD NumType=Card _ _ _ _ 4 binds bind NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 equilibrium equilibrium ADJ JJ Degree=Pos _ _ _ _ 7 fashion fashion NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 STAT2 Stat2 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 STAT3 STAT3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 15 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 17 STAT2 STAT2 NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 STAT3 STAT3 NOUN NN Number=Sing _ _ _ _ 20 exist exist VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 separate separate ADJ JJ Degree=Pos _ _ _ _ 23 heterocomplexes heterocomplex NOUN NNS Number=Plur _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 STAT1 stat1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 model model NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 which which PRON WDT PronType=Rel _ _ _ _ 33 STAT1 STAT1 PROPN NNP Number=Sing _ _ _ _ 34 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 common common ADJ JJ Degree=Pos _ _ _ _ 37 binding binding VERB VBG VerbForm=Ger _ _ _ _ 38 site site NOUN NN Number=Sing _ _ _ _ 39 for for ADP IN _ _ _ _ _ 40 other other ADJ JJ Degree=Pos _ _ _ _ 41 STAT Stat NOUN NN Number=Sing _ _ _ _ 42 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 783 # text = Document 003002284 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002284 003002284 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 784 # text = The involvement of multiple tumor necrosis factor receptor (TNFR)-associated factors in the signaling mechanisms of receptor activator of NF-kappaB, a member of the TNFR superfamily. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 involvement involvement NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 5 tumor tumor NOUN NN Number=Sing _ _ _ _ 6 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 TNFR TNFR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 factors factor NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 signaling signaling NOUN NN Number=Sing _ _ _ _ 18 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ _ 21 activator activator NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 member member NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 TNFR TNFR PROPN NNP Number=Sing _ _ _ _ 32 superfamily superfamily ADV RB _ _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 785 # text = Receptor activator of NF-kappaB (RANK) is a recently identified member of the tumor necrosis factor receptor superfamily and is expressed on activated T cells and dendritic cells. 1 Receptor Receptor NOUN NN Number=Sing _ _ _ _ 2 activator activator NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 RANK rank PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 recently recently ADV RB _ _ _ _ _ 13 identified identify ADJ JJ Degree=Pos _ _ _ _ 14 member member NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 tumor tumor NOUN NN Number=Sing _ _ _ _ 18 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ _ 21 superfamily superfamily ADV RB _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 T t PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 dendritic dendritic ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 786 # text = Its cognate ligand (RANKL) plays significant roles in the activation of dendritic cell function and osteoclast differentiation. 1 Its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 2 cognate cognate ADJ JJ Degree=Pos _ _ _ _ 3 ligand ligand NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 RANKL RANKL NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 significant significant ADJ JJ Degree=Pos _ _ _ _ 9 roles role NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 dendritic dendritic ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 function function NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 osteoclast osteoclast ADJ JJ Degree=Pos _ _ _ _ 19 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 787 # text = We demonstrate here the interaction of RANK with tumor necrosis factor receptor-associated factors (TRAFs) 1, 2, 3, 5, and 6 both in vitro and in cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 interaction interaction NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 RANK rank PROPN NNP Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 tumor tumor NOUN NN Number=Sing _ _ _ _ 10 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 TRAFs Trafs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 6 6 NUM CD NumType=Card _ _ _ _ 29 both both CCONJ CC _ _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 vitro vitro NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 788 # text = Mapping of the structural requirements for TRAF/RANK interaction revealed multiple TRAF binding sites clustered in two distinct domains in the RANK cytoplasmic tail. 1 Mapping mapping NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 structural structural ADJ JJ Degree=Pos _ _ _ _ 5 requirements requirement NOUN NNS Number=Plur _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 TRAF TRAF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 RANK rank PROPN NNP Number=Sing _ _ _ _ 10 interaction interaction NOUN NN Number=Sing _ _ _ _ 11 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 13 TRAF Traf SCONJ IN _ _ _ _ _ 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 sites site NOUN NNS Number=Plur _ _ _ _ 16 clustered cluster VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 two two NUM CD NumType=Card _ _ _ _ 19 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 20 domains domains NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 RANK rank PROPN NNP Number=Sing _ _ _ _ 24 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 25 tail tail NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 789 # text = These TRAF binding domains were shown to be functionally important for the RANK-dependent induction of NF-kappaB and c-Jun NH2-terminal kinase activities. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 TRAF Traf NOUN NN Number=Sing _ _ _ _ 3 binding binding VERB VBG VerbForm=Ger _ _ _ _ 4 domains domain NOUN NNS Number=Plur _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 functionally functionally ADV RB _ _ _ _ _ 10 important important ADJ JJ Degree=Pos _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 RANK Rank PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 c care NOUN NN Abbr=Yes|Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 Jun Jun PROPN NNP Number=Sing _ _ _ _ 25 NH2 NH2 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 -terminal -terminal ADJ JJ Degree=Pos _ _ _ _ 27 kinase kinase NOUN NN Number=Sing _ _ _ _ 28 activities activity NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 790 # text = Site-directed mutagenesis demonstrated that these TRAF binding sites exhibited selective binding for different TRAF proteins. 1 Site site PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 directed direct VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 mutagenesis mutagenesis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 5 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 TRAF Traf NOUN NN Number=Sing _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 sites site NOUN NNS Number=Plur _ _ _ _ 11 exhibited exhibite VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 selective selective ADJ JJ Degree=Pos _ _ _ _ 13 binding binding VERB VBG VerbForm=Ger _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 different different ADJ JJ Degree=Pos _ _ _ _ 16 TRAF TRAF PROPN NNP Number=Sing _ _ _ _ 17 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 791 # text = In particular, TRAF6 interacted with membrane-proximal determinants distinct from those binding TRAFs 1, 2, 3, and 5. 1 In in ADP IN _ _ _ _ _ 2 particular particular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 TRAF6 Traf6 PROPN NNP Number=Sing _ _ _ _ 5 interacted interact VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 membrane membrane NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 10 determinants determinant NOUN NNS Number=Plur _ _ _ _ 11 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 TRAFs TRAFs ADV RB _ _ _ _ _ 16 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 792 # text = When this membrane-proximal TRAF6 interaction domain was deleted, RANK-mediated NF-kappaB signaling was completely inhibited while c-Jun NH2-terminal kinase activation was partially inhibited. 1 When when ADV WRB PronType=Int _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 membrane membrane NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 6 TRAF6 TRAF6 NUM CD NumType=Card _ _ _ _ 7 interaction interaction NOUN NN Number=Sing _ _ _ _ 8 domain domain NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 deleted delete VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 RANK Rank PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 18 signaling signaling NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 completely completely ADV RB _ _ _ _ _ 21 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 while while SCONJ IN _ _ _ _ _ 23 c- c- SYM NFP _ _ _ _ SpaceAfter=No 24 Jun Jun PROPN NNP Number=Sing _ _ _ _ 25 NH2 NH2 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 28 kinase kinase NOUN NN Number=Sing _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ _ 30 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 31 partially partially ADV RB _ _ _ _ _ 32 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 793 # text = An NH2-terminal truncation mutant of TRAF6 inhibited RANKL-mediated NF-kappaB activation, but failed to affect constitutive signaling induced by receptor overexpression, revealing a selective role for TRAF6 in ligand-induced activation events. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 NH2 Nh2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 5 truncation truncation NOUN NN Number=Sing _ _ _ _ 6 mutant mutant NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 TRAF6 TRAF6 NUM CD NumType=Card _ _ _ _ 9 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 RANKL Rankl NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 but but CCONJ CC _ _ _ _ _ 19 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 affect affect VERB VB VerbForm=Inf _ _ _ _ 22 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 23 signaling signaling NOUN NN Number=Sing _ _ _ _ 24 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 receptor receptor NOUN NN Number=Sing _ _ _ _ 27 overexpression overexpression NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 revealing reveal VERB VBG VerbForm=Ger _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 selective selective ADJ JJ Degree=Pos _ _ _ _ 32 role role NOUN NN Number=Sing _ _ _ _ 33 for for ADP IN _ _ _ _ _ 34 TRAF6 TRAF6 NUM CD NumType=Card _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 ligand ligand NUM CD NumType=Card _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 activation activation NOUN NN Number=Sing _ _ _ _ 40 events event NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 794 # text = Document 003002287 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002287 003002287 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 795 # text = The AP-1 site at -150 bp, but not the NF-kappa B site, is likely to represent the major target of protein kinase C in the interleukin 2 promoter. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 site site NOUN NN Number=Sing _ _ _ _ 6 at at ADP IN _ _ _ _ _ 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 150 150 NUM CD NumType=Card _ _ _ _ 9 bp bp NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 not not ADV RB _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 likely likely ADJ JJ Degree=Pos _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 represent represent VERB VB VerbForm=Inf _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 major major ADJ JJ Degree=Pos _ _ _ _ 26 target target NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 protein protein NOUN NN Number=Sing _ _ _ _ 29 kinase kinase NOUN NN Number=Sing _ _ _ _ 30 C c NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 34 2 2 NUM CD NumType=Card _ _ _ _ 35 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 796 # text = Stimulation of T cells with antigen results in activation of several kinases, including protein kinase C (PKC), that may mediate the later induction of activation-related genes. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 7 results result NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 several several ADJ JJ Degree=Pos _ _ _ _ 12 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 including include VERB VBG VerbForm=Ger _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 kinase kinase NOUN NN Number=Sing _ _ _ _ 17 C C PROPN NNP Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 23 may may AUX MD VerbForm=Fin _ _ _ _ 24 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 later later ADJ JJR Degree=Cmp _ _ _ _ 27 induction induction NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 related related ADJ JJ Degree=Pos _ _ _ _ 32 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 797 # text = We have examined the potential role of PKC in induction of the interleukin 2 (IL-2) gene in T cells stimulated through the T cell receptor/CD3 complex. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 potential potential ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 PKC PKC PROPN NNP Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 14 2 2 NUM CD NumType=Card _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 through through ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 T T PROPN NNP Number=Sing _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 receptor/CD3 receptor/CD3 NUM CD NumType=Card _ _ _ _ 30 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 798 # text = We have previously shown that prolonged treatment of the untransformed T cell clone Ar-5 with phorbol esters results in downmodulation of the alpha and beta isozymes of PKC, and abrogates induction of IL-2 mRNA and protein. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 prolonged prolonge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 treatment treatment NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 untransformed untransformed ADJ JJ Degree=Pos _ _ _ _ 11 T T PROPN NNP Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 clone clone NOUN NN Number=Sing _ _ _ _ 14 Ar be PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 5 5 NUM CD NumType=Card _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 19 esters ester NOUN NNS Number=Plur _ _ _ _ 20 results result NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 downmodulation downmodulation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 alpha alpha NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 beta beta NOUN NN Number=Sing _ _ _ _ 28 isozymes isozyme NOUN NNS Number=Plur _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 abrogates abrogate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 induction induction NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 2 2 NUM CD NumType=Card _ _ _ _ 39 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 799 # text = Here we show that phorbol ester treatment also abolishes induction of chloramphenicol acetyltransferase activity in Ar-5 cells transfected with a plasmid containing the IL-2 promoter linked to this reporter gene. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 6 ester ester NOUN NN Number=Sing _ _ _ _ 7 treatment treatment NOUN NN Number=Sing _ _ _ _ 8 also also ADV RB _ _ _ _ _ 9 abolishes abolish VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 13 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 Ar ar PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 5 5 NUM CD NumType=Card _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 24 containing contain VERB VBG VerbForm=Ger _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ _ 30 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 33 reporter reporter NOUN NN Number=Sing _ _ _ _ 34 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 800 # text = The IL-2 promoter contains binding sites for nuclear factors including NFAT-1, Oct, NF-kappa B, and AP-1, which are all potentially sensitive to activation of PKC. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ _ 6 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 sites site NOUN NNS Number=Plur _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ _ 12 including include VERB VBG VerbForm=Ger _ _ _ _ 13 NFAT Nfat ADV RB _ _ _ _ SpaceAfter=No 14 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa PROPN NNP Number=Sing _ _ _ _ 21 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 which which PRON WDT PronType=Rel _ _ _ _ 29 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 all all ADV RB _ _ _ _ _ 31 potentially potentially ADV RB _ _ _ _ _ 32 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 activation activation NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 801 # text = We show that induction of a trimer of the NFAT and Oct sites is not sensitive to phorbol ester treatment, and that mutations in the NF-kappa B site have no effect on inducibility of the IL-2 promoter. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 induction induction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 trimer trimer NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 Oct Oct PROPN NNP Number=Sing _ _ _ _ 13 sites site NOUN NNS Number=Plur _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 phorbol phorbol VERB VB VerbForm=Inf _ _ _ _ 19 ester ester NOUN NN Number=Sing _ _ _ _ 20 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 mutations mutation NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ _ 31 site site NOUN NN Number=Sing _ _ _ _ 32 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 no no DET DT _ _ _ _ _ 34 effect effect NOUN NN Number=Sing _ _ _ _ 35 on on ADP IN _ _ _ _ _ 36 inducibility inducibility NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 2 2 NUM CD NumType=Card _ _ _ _ 42 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 802 # text = In contrast, mutations in the AP-1 site located at -150 bp almost completely abrogate induction of the IL-2 promoter, and appearance of an inducible nuclear factor binding to this site is sensitive to PKC depletion. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 mutations mutation NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 site site NOUN NN Number=Sing _ _ _ _ 11 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 at at ADP IN _ _ _ _ _ 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 150 150 NUM CD NumType=Card _ _ _ _ 15 bp bp NOUN NN Number=Sing _ _ _ _ 16 almost almost ADV RB _ _ _ _ _ 17 completely completely ADV RB _ _ _ _ _ 18 abrogate abrogate ADJ JJ Degree=Pos _ _ _ _ 19 induction induction NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 appearance appearance NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 32 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 33 factor factor NOUN NN Number=Sing _ _ _ _ 34 binding bind VERB VBG VerbForm=Ger _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 37 site site NOUN NN Number=Sing _ _ _ _ 38 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 40 to to ADP IN _ _ _ _ _ 41 PKC PKC PROPN NNP Number=Sing _ _ _ _ 42 depletion depletion NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 803 # text = Moreover, cotransfections with c-fos and c-jun expression plasmids markedly enhance induction of the IL-2 promoter in minimally stimulated T cells. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 cotransfections cotransfection NOUN NNS Number=Plur _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 c- c- SYM NFP _ _ _ _ SpaceAfter=No 6 fos fo NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 c- c- SYM NFP _ _ _ _ SpaceAfter=No 9 jun jun ADJ JJ Degree=Pos _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 12 markedly markedly ADV RB _ _ _ _ _ 13 enhance enhance VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 induction induction NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ _ 20 promoter promoter NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 minimally minimally ADV RB _ _ _ _ _ 23 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 804 # text = Our results indicate that the AP-1 site at -150 bp represents a major, if not the only, site of PKC responsiveness in the IL-2 promoter. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 site site NOUN NN Number=Sing _ _ _ _ 10 at at ADP IN _ _ _ _ _ 11 - - SYM SYM _ _ _ _ SpaceAfter=No 12 150 150 NUM CD NumType=Card _ _ _ _ 13 bp bp NOUN NN Number=Sing _ _ _ _ 14 represents represent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 major major ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 if if SCONJ IN _ _ _ _ _ 19 not not ADV RB _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 only only ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 site site NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 PKC Pkc NOUN NN Number=Sing _ _ _ _ 26 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ _ 32 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 805 # text = Document 003002289 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002289 003002289 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 806 # text = Lipopolysaccharide induction of the tumor necrosis factor-alpha promoter in human monocytic cells. 1 Lipopolysaccharide Lipopolysaccharide VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 tumor tumor NOUN NN Number=Sing _ _ _ _ 6 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 -alpha -alpha NOUN NN Number=Sing _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 807 # text = Regulation by Egr-1, c-Jun, and NF-kappaB transcription factors. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 by by ADP IN _ _ _ _ _ 3 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 c class NOUN NN Abbr=Yes|Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 808 # text = Biosynthesis of tumor necrosis factor-alpha (TNF-alpha) is predominantly by cells of the monocytic lineage. 1 Biosynthesis Biosynthesis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 tumor tumor NOUN NN Number=Sing _ _ _ _ 4 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 predominantly predominantly ADV RB _ _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 20 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 809 # text = This study examined the role of various cis-acting regulatory elements in the lipopolysaccharide (LPS) induction of the human TNF-alpha promoter in cells of monocytic lineage. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 various various ADJ JJ Degree=Pos _ _ _ _ 8 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 -acting -act VERB VBG VerbForm=Ger _ _ _ _ 10 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 11 elements element NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 LPS LPS INTJ UH _ _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 induction induction NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 alpha alpha NOUN NN Number=Sing _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 30 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 810 # text = Functional analysis of monocytic THP-1 cells transfected with plasmids containing various lengths of TNF-alpha promoter localized enhancer elements in a region (-182 to -37 base pairs (bp)) that were required for optimal transcription of the TNF-alpha gene in response to LPS. 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 5 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 12 containing contain VERB VBG VerbForm=Ger _ _ _ _ 13 various various ADJ JJ Degree=Pos _ _ _ _ 14 lengths length NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 alpha alpha ADV RB _ _ _ _ _ 19 promoter promoter ADV RBR Degree=Cmp _ _ _ _ 20 localized localize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 22 elements element NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 region region NOUN NN Number=Sing _ _ _ _ 26 (-182 (-182 NOUN NN Number=Sing _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 37 37 NUM CD NumType=Card _ _ _ _ 30 base base NOUN NN Number=Sing _ _ _ _ 31 pairs pair NOUN NNS Number=Plur _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 bp bp NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 that that PRON WDT PronType=Rel _ _ _ _ 37 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 38 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 for for ADP IN _ _ _ _ _ 40 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 41 transcription transcription NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 TNF Tnf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT , _ _ _ _ SpaceAfter=No 46 alpha alpha ADV RB _ _ _ _ _ 47 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 response response NOUN NN Number=Sing _ _ _ _ 50 to to ADP IN _ _ _ _ _ 51 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 811 # text = Two regions were identified: region I (-182 to -162 bp) contained an overlapping Sp1/Egr-1 site, and region II (-119 to -88) contained CRE and NF-kappaB (designated kappaB3) sites. 1 Two two NUM CD NumType=Card _ _ _ _ 2 regions region NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 5 : : PUNCT : _ _ _ _ _ 6 region region NOUN NN Number=Sing _ _ _ _ 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 -182 -182 NUM CD NumType=Card _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 - - SYM SYM _ _ _ _ SpaceAfter=No 12 162 162 NUM CD NumType=Card _ _ _ _ 13 bp bp NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 overlapping overlapp ADJ JJ Degree=Pos _ _ _ _ 18 Sp1/Egr Sp1/Egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 region region NOUN NN Number=Sing _ _ _ _ 25 II ii NUM CD NumType=Card _ _ _ _ 26 (- (- PUNCT . _ _ _ _ SpaceAfter=No 27 119 119 NUM CD NumType=Card _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 - - SYM SYM _ _ _ _ SpaceAfter=No 30 88 88 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 CRE CRE PROPN NNP Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 kappaB3 kappaB3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 812 # text = In unstimulated THP-1, CRE-binding protein and, to a lesser extent, c-Jun complexes were found to bind to the CRE site. 1 In in ADP IN _ _ _ _ _ 2 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 3 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 CRE Cre NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 lesser lesser ADJ JJR Degree=Cmp _ _ _ _ 16 extent extent NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 Jun Jun PROPN NNP Number=Sing _ _ _ _ 21 complexes complex NOUN NNS Number=Plur _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 bind bind VERB VB VerbForm=Inf _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 CRE Cre PROPN NNP Number=Sing _ _ _ _ 29 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 813 # text = LPS stimulation increased the binding of c-Jun-containing complexes. 1 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 2 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 3 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 binding binding NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 containing containing VERB VBG VerbForm=Ger _ _ _ _ 12 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 814 # text = In addition, LPS stimulation induced the binding of cognate nuclear factors to the Egr-1 and kappaB3 sites, which were identified as Egr-1 and p50/p65, respectively. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 LPS LPS PROPN NNP Number=Sing _ _ _ _ 5 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 6 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 binding binding NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 cognate cognate ADJ JJ Degree=Pos _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 -1 -1 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 kappaB3 kappaB3 NUM CD NumType=Card _ _ _ _ 19 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 -1 -1 NUM CD NumType=Card _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 p50/ p50/ SYM SYM _ _ _ _ SpaceAfter=No 29 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 815 # text = The CRE and kappaB3 sites in region II together conferred strong LPS responsiveness to a heterologous promoter, whereas individually they failed to provide transcriptional activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 CRE Cre NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 kappaB3 kappaB3 NOUN NN Number=Sing _ _ _ _ 5 sites site NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 region region NOUN NN Number=Sing _ _ _ _ 8 II ii NUM CD NumType=Card _ _ _ _ 9 together together ADV RB _ _ _ _ _ 10 conferred confer VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 strong strong ADJ JJ Degree=Pos _ _ _ _ 12 LPS Lps NOUN NN Number=Sing _ _ _ _ 13 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 whereas whereas SCONJ IN _ _ _ _ _ 20 individually individually ADV RB _ _ _ _ _ 21 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 22 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 provide provide VERB VB VerbForm=Inf _ _ _ _ 25 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 816 # text = Furthermore, increasing the spacing between the CRE and the kappaB3 sites completely abolished LPS induction, suggesting a cooperative interaction between c-Jun complexes and p50/p65. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 spacing spacing NOUN NN Number=Sing _ _ _ _ 6 between between ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 CRE Cre NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 kappaB3 kappaB3 NOUN NN Number=Sing _ _ _ _ 12 sites site NOUN NNS Number=Plur _ _ _ _ 13 completely completely ADV RB _ _ _ _ _ 14 abolished abolish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 LPS Lps NOUN NN Number=Sing _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 cooperative cooperative ADJ JJ Degree=Pos _ _ _ _ 21 interaction interaction NOUN NN Number=Sing _ _ _ _ 22 between between ADP IN _ _ _ _ _ 23 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 Jun Jun PROPN NNP Number=Sing _ _ _ _ 26 complexes complex NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 p50/ p50ith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 29 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 817 # text = These studies indicate that maximal LPS induction of the TNF-alpha promoter is mediated by concerted participation of at least two separate cis-acting regulatory elements. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 6 LPS Lps NOUN NN Number=Sing _ _ _ _ 7 induction induction NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 alpha alpha NOUN NN Number=Sing _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 concerted concert VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 participation participation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 at at ADV RB _ _ _ _ _ 21 least least ADV RBS Degree=Sup _ _ _ _ 22 two two NUM CD NumType=Card _ _ _ _ 23 separate separate ADJ JJ Degree=Pos _ _ _ _ 24 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 acting acting VERB VBG VerbForm=Ger _ _ _ _ 27 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 28 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 818 # text = Document 003002291 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002291 003002291 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 819 # text = Synergism between the CD3 antigen- and CD2 antigen-derived signals. 1 Synergism Synergism NOUN NN Number=Sing _ _ _ _ 2 between between ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 5 antigen antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 CD2 CD2 NOUN NN Number=Sing _ _ _ _ 9 antigen antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 820 # text = Exploration at the level of induction of DNA-binding proteins and characterization of the inhibitory activity of cyclosporine. 1 Exploration exploration NOUN NN Number=Sing _ _ _ _ 2 at at ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 level level NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 induction induction NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 binding bind VERB VBG VerbForm=Ger _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 characterization characterization NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 cyclosporine cyclosporine NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 821 # text = We have demonstrated earlier that the crosslinkage of the CD3/TCR complex with the CD2 antigen results in the proliferation of normal human T cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 earlier earlier ADV RBR Degree=Cmp _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 crosslinkage crosslinkage NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 CD3/TCR Cd3/tcr PROPN NNP Number=Sing _ _ _ _ 11 complex complex NOUN NN Number=Sing _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 CD2 Cd2 NOUN NN Number=Sing _ _ _ _ 15 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 16 results result NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 normal normal ADJ JJ Degree=Pos _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 822 # text = The effect of this synergism was perceptible at the level of induction of the IL-2 gene, a process critical for T cell growth. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 synergism synergism NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 perceptible perceptible ADJ JJ Degree=Pos _ _ _ _ 8 at at ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 level level NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 process process NOUN NN Number=Sing _ _ _ _ 22 critical critical ADJ JJ Degree=Pos _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 823 # text = To further understand the molecular and nuclear basis for this synergism, we have explored the induction of DNA-binding proteins in highly purified normal human T cells signaled via the CD3 and/or CD2 proteins. 1 To to PART TO _ _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 understand understand VERB VB VerbForm=Inf _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 basis basis NOUN NN Number=Sing _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 synergism synergism NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 explored explore VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 induction induction NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 binding binding VERB VBG VerbForm=Ger _ _ _ _ 22 proteins protein NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 highly highly ADV RB _ _ _ _ _ 25 purified purified ADJ JJ Degree=Pos _ _ _ _ 26 normal normal ADJ JJ Degree=Pos _ _ _ _ 27 human human ADJ JJ Degree=Pos _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 signaled signale VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 via via ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ SpaceAfter=No 35 / / PUNCT , _ _ _ _ SpaceAfter=No 36 or or CCONJ CC _ _ _ _ _ 37 CD2 CD2 NOUN NN Number=Sing _ _ _ _ 38 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 824 # text = The effect of transmembrane signaling of T cells with ionomycin, and/or sn-1,2 dioctanoyl glycerol, was also determined. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 transmembrane transmembrane NOUN NN Number=Sing _ _ _ _ 5 signaling signaling NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 ionomycin ionomycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ SpaceAfter=No 13 / / PUNCT , _ _ _ _ SpaceAfter=No 14 or or CCONJ CC _ _ _ _ _ 15 sn sn NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ,2 ,2 NUM CD NumType=Card _ _ _ _ 19 dioctanoyl dioctanoyl NOUN NN Number=Sing _ _ _ _ 20 glycerol glycerol NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 also also ADV RB _ _ _ _ _ 24 determined determined ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 825 # text = The emergence of nuclear binding proteins was investigated using interleukin-2 sequence specific oligonucleotide probes in the electrophoretic mobility shift assay. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 emergence emergence NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 binding binding VERB VBG VerbForm=Ger _ _ _ _ 6 proteins protein NOUN NNS Number=Plur _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 using use VERB VBG VerbForm=Ger _ _ _ _ 10 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 sequence sequence NOUN NN Number=Sing _ _ _ _ 14 specific specific ADJ JJ Degree=Pos _ _ _ _ 15 oligonucleotide oligonucleotide ADJ JJ Degree=Pos _ _ _ _ 16 probes probe NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 20 mobility mobility NOUN NN Number=Sing _ _ _ _ 21 shift shift NOUN NN Number=Sing _ _ _ _ 22 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 826 # text = Our studies demonstrate for the first time that CD3 antigen-derived signals and CD2 antigen-derived signals are synergistic in inducing the emergence of transcription factors that bind to the NF-AT1, AP-1, and NF-kB sites located in the promoter/enhancer region of the IL-2 gene. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 7 time time NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 CD3 CD3 VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 antigen antigen ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 signals signal NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 CD2 CD2 NOUN NN Number=Sing _ _ _ _ 16 antigen antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 signals signal NOUN NNS Number=Plur _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 22 in in SCONJ IN _ _ _ _ _ 23 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 emergence emergence NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 factors factor NOUN NNS Number=Plur _ _ _ _ 29 that that PRON WDT PronType=Rel _ _ _ _ 30 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 AT1 AT1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 kB kb PROPN NNP Number=Sing _ _ _ _ 45 sites site NOUN NNS Number=Plur _ _ _ _ 46 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 / / PUNCT , _ _ _ _ SpaceAfter=No 51 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 52 region region NOUN NN Number=Sing _ _ _ _ 53 of of ADP IN _ _ _ _ _ 54 the the DET DT Definite=Def|PronType=Art _ _ _ _ 55 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 56 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 57 2 2 NUM CD NumType=Card _ _ _ _ 58 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 827 # text = Moreover, cyclosporine, at concentrations readily accomplished in clinical practice, was found to inhibit the emergence of these DNA-binding proteins in normal human T cells signaled via cell surface proteins implicated in antigen-dependent 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 cyclosporine cyclosporine NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 at at ADP IN _ _ _ _ _ 6 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 7 readily readily ADV RB _ _ _ _ _ 8 accomplished accomplish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 11 practice practice NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 emergence emergence NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 21 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 binding binding VERB VBG VerbForm=Ger _ _ _ _ 24 proteins protein NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 normal normal ADJ JJ Degree=Pos _ _ _ _ 27 human human ADJ JJ Degree=Pos _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 signaled signale VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 via via ADP IN _ _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 surface surface NOUN NN Number=Sing _ _ _ _ 34 proteins protein NOUN NNS Number=Plur _ _ _ _ 35 implicated implicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 antigen antigen ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 dependent dependent ADJ JJ Degree=Pos _ _ _ _ # sent_id = 828 # text = T cell activation and in T cells stimulated by mobilization of cellular calcium and activation of protein kinase C. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 mobilization mobilization NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 13 calcium calcium NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 kinase kinase NOUN NN Number=Sing _ _ _ _ 19 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 829 # text = Document 003002298 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002298 003002298 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 830 # text = Monocytic cell type-specific transcriptional induction of collagenase. 1 Monocytic Monocytic ADJ JJ Degree=Pos _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT : _ _ _ _ SpaceAfter=No 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 induction induction NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 collagenase collagenase NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 831 # text = Interstitial collagenase (MMP-1), a metalloproteinase produced by resident and inflammatory cells during connective tissue turnover, cleaves type I collagen fibrils. 1 Interstitial Interstitial ADJ JJ Degree=Pos _ _ _ _ 2 collagenase collagenase NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 MMP Mmp NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 metalloproteinase metalloproteinase NOUN NN Number=Sing _ _ _ _ 11 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 resident resident NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 during during ADP IN _ _ _ _ _ 18 connective connective ADJ JJ Degree=Pos _ _ _ _ 19 tissue tissue NOUN NN Number=Sing _ _ _ _ 20 turnover turnover NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 cleaves cleave NOUN NNS Number=Plur _ _ _ _ 23 type type VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 25 collagen collagen ADJ JJ Degree=Pos _ _ _ _ 26 fibrils fibril NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 832 # text = This catalytic event is rate limiting in remodeling of tissues rich in fibrillar collagen such as the skin and lungs. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 catalytic catalytic ADJ JJ Degree=Pos _ _ _ _ 3 event event NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 rate rate NOUN NN Number=Sing _ _ _ _ 6 limiting limit VERB VBG VerbForm=Ger _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 remodeling remodeling NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 tissues tissue NOUN NNS Number=Plur _ _ _ _ 11 rich rich ADJ JJ Degree=Pos _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 fibrillar fibrillar ADJ JJ Degree=Pos _ _ _ _ 14 collagen collagen NOUN NNS Number=Plur _ _ _ _ 15 such such ADJ JJ Degree=Pos _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 skin skin NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 lungs lung NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 833 # text = The regulation of collagenase expression is cell-type specific; bacterial LPS and zymosan, a yeast cell wall derivative, are potent inducers of collagenase expression in macrophages, but do not alter fibroblast collagenase expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 collagenase collagenase NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 type type NOUN NN Number=Sing _ _ _ _ 10 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 ; ; PUNCT , _ _ _ _ _ 12 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 13 LPS Lps NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 zymosan zymosan NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 yeast yeast ADJ JJ Degree=Pos _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 wall wall NOUN NN Number=Sing _ _ _ _ 21 derivative derivative NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 potent potent ADJ JJ Degree=Pos _ _ _ _ 25 inducers inducer NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 collagenase collagenase NOUN NN Number=Sing _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 but but CCONJ CC _ _ _ _ _ 33 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 not not PART RB _ _ _ _ _ 35 alter alter VERB VB VerbForm=Inf _ _ _ _ 36 fibroblast fibroblast ADJ JJ Degree=Pos _ _ _ _ 37 collagenase collagenase NOUN NN Number=Sing _ _ _ _ 38 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 834 # text = Since promoter elements controlling collagenase transcription in monocytic cells have not been previously defined, we sought to delineate responsive cis-acting elements of the collagenase promoter in transiently transfected human (U937) and murine (J774) monocytic cell lines. 1 Since since SCONJ IN _ _ _ _ _ 2 promoter promoter NOUN NN Number=Sing _ _ _ _ 3 elements element NOUN NNS Number=Plur _ _ _ _ 4 controlling controlle VERB VBG VerbForm=Ger _ _ _ _ 5 collagenase collagenase NOUN NN Number=Sing _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 13 previously previously ADV RB _ _ _ _ _ 14 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 17 sought seek VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 delineate delineate VERB VB VerbForm=Inf _ _ _ _ 20 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 21 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 acting acte VERB VBG VerbForm=Ger _ _ _ _ 24 elements element NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 collagenase collagenase NOUN NN Number=Sing _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 transiently transiently ADV RB _ _ _ _ _ 31 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 human human NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 U937 U937 NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 murine murine NOUN NN Number=Sing _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 J774 J774 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 42 cell cell NOUN NN Number=Sing _ _ _ _ 43 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 835 # text = Deletion constructs containing as little as 72 bp of 5' -flanking sequence of the collagenase promoter were sufficient for LPS- or zymosan-mediated transcriptional induction, whereas phorbol inducibility exhibited an absolute requirement for upstream elements including the polyoma enhancer A-binding protein-3 site (-83 to -91) and TTCA sequence (-102 to -105) in both monocytic cells and fibroblasts. 1 Deletion Deletion NOUN NN Number=Sing _ _ _ _ 2 constructs construct NOUN NNS Number=Plur _ _ _ _ 3 containing contain VERB VBG VerbForm=Ger _ _ _ _ 4 as as ADV RB _ _ _ _ _ 5 little little ADJ JJ Degree=Pos _ _ _ _ 6 as as ADP IN _ _ _ _ _ 7 72 72 NUM CD NumType=Card _ _ _ _ 8 bp bp NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ' ' PUNCT '' _ _ _ _ _ 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 14 sequence sequence NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 collagenase collagenase NOUN NN Number=Sing _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ _ 19 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 zymosan zymosan NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 29 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 whereas whereas SCONJ IN _ _ _ _ _ 32 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 33 inducibility inducibility NOUN NN Number=Sing _ _ _ _ 34 exhibited exhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 absolute absolute ADJ JJ Degree=Pos _ _ _ _ 37 requirement requirement NOUN NN Number=Sing _ _ _ _ 38 for for ADP IN _ _ _ _ _ 39 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 40 elements element NOUN NNS Number=Plur _ _ _ _ 41 including include VERB VBG VerbForm=Ger _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 polyoma polyoma NOUN NN Number=Sing _ _ _ _ 44 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 45 A- A- PUNCT : _ _ _ _ SpaceAfter=No 46 binding bind VERB VBG VerbForm=Ger _ _ _ _ 47 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 -3 -3 NUM CD NumType=Card _ _ _ _ 49 site site NOUN NN Number=Sing _ _ _ _ 50 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 51 - - SYM SYM _ _ _ _ SpaceAfter=No 52 83 83 NUM CD NumType=Card _ _ _ _ 53 to to ADP IN _ _ _ _ _ 54 - - SYM SYM _ _ _ _ SpaceAfter=No 55 91 91 NUM CD NumType=Card _ _ _ SpaceAfter=No 56 ) ) PUNCT -RRB- _ _ _ _ _ 57 and and CCONJ CC _ _ _ _ _ 58 TTCA Ttca PROPN NNP Number=Sing _ _ _ _ 59 sequence sequence NOUN NN Number=Sing _ _ _ _ 60 (- (- PUNCT . _ _ _ _ SpaceAfter=No 61 102 102 NUM CD NumType=Card _ _ _ _ 62 to to ADP IN _ _ _ _ _ 63 - - SYM SYM _ _ _ _ SpaceAfter=No 64 105 105 NUM CD NumType=Card _ _ _ SpaceAfter=No 65 ) ) PUNCT -RRB- _ _ _ _ _ 66 in in ADP IN _ _ _ _ _ 67 both both DET DT _ _ _ _ _ 68 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 69 cells cell NOUN NNS Number=Plur _ _ _ _ 70 and and CCONJ CC _ _ _ _ _ 71 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 72 . . PUNCT . _ _ _ _ _ # sent_id = 836 # text = Mutagenesis of the activator protein-1 [AP-1] site at -72 abolished basal promoter activity and LPS/zymosan inducibility, while mutagenesis of an NF-kappaB-like site at -20 to -10 had no effect. 1 Mutagenesis Mutagenesis PROPN NNP Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 activator activator NOUN NN Number=Sing _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ] ] PUNCT -RRB- _ _ _ _ _ 13 site site NOUN NN Number=Sing _ _ _ _ 14 at at ADP IN _ _ _ _ _ 15 - - SYM SYM _ _ _ _ SpaceAfter=No 16 72 72 NUM CD NumType=Card _ _ _ _ 17 abolished abolish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 basal basal ADJ JJ Degree=Pos _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 LPS Lp NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 / / PUNCT , _ _ _ _ SpaceAfter=No 24 zymosan zymosan ADJ JJ Degree=Pos _ _ _ _ 25 inducibility inducibility NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 while while SCONJ IN _ _ _ _ _ 28 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 like like ADJ JJ Degree=Pos _ _ _ _ 36 site site NOUN NN Number=Sing _ _ _ _ 37 at at ADP IN _ _ _ _ _ 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 20 20 NUM CD NumType=Card _ _ _ _ 40 to to ADP IN _ _ _ _ _ 41 - - SYM SYM _ _ _ _ SpaceAfter=No 42 10 10 NUM CD NumType=Card _ _ _ _ 43 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 44 no no DET DT _ _ _ _ _ 45 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 837 # text = Nuclear extracts from LPS- and zymosan-treated cells showed strong AP-1 activity by gel-shift analysis, and supershift analysis showed the AP-1 complexes contained specific members of both the jun and fos gene families. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 extracts extract NOUN NNS Number=Plur _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 zymosan zymosan ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 strong strong ADJ JJ Degree=Pos _ _ _ _ 13 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 gel gel NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 shift shift NOUN NN Number=Sing _ _ _ _ 21 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 supershift supershift ADJ JJ Degree=Pos _ _ _ _ 25 analysis analysis NOUN NN Number=Sing _ _ _ _ 26 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 complexes complexe NOUN NNS Number=Plur _ _ _ _ 32 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 specific specific ADJ JJ Degree=Pos _ _ _ _ 34 members member NOUN NNS Number=Plur _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 both both CCONJ CC _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 jun jun NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 fos fo NOUN NNS Number=Plur _ _ _ _ 41 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 families family NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 838 # text = These data indicate that, in contrast to most LPS effects, AP-1, but not nuclear factor-kappaB, mediates LPS induction of collagenase transcription in macrophagelike cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 contrast contrast NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 most most ADJ JJS Degree=Sup _ _ _ _ 10 LPS Lps NOUN NN Number=Sing _ _ _ _ 11 effects effect NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 not not ADV RB _ _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappaB kappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 LPS Lp ADJ JJ Degree=Pos _ _ _ _ 26 induction induction NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 collagenase collagenase NOUN NN Number=Sing _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 macrophagelike macrophagelike ADJ JJ Degree=Pos _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 839 # text = Furthermore, as compared to regulation by phorbol ester, collagenase induction in monocytic cells by cell wall derivatives of bacteria or yeast is largely independent of upstream promoter sequences. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 as as SCONJ IN _ _ _ _ _ 4 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 regulation regulation NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 9 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 collagenase collagenase NOUN NN Number=Sing _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 wall wall NOUN NN Number=Sing _ _ _ _ 19 derivatives derivative NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 bacteria bacteria NOUN NN Number=Sing _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 yeast yeast NOUN NN Number=Sing _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 largely largely ADV RB _ _ _ _ _ 26 independent independent ADJ JJ Degree=Pos _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ _ 30 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 840 # text = Document 003002307 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002307 003002307 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 841 # text = Salicylates inhibit lipopolysaccharide-induced transcriptional activation of the tissue factor gene in human monocytic cells. 1 Salicylates Salicylate PROPN NNP Number=Sing _ _ _ _ 2 inhibit inhibit NOUN NN Number=Sing _ _ _ _ 3 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT : _ _ _ _ SpaceAfter=No 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 tissue tissue NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 842 # text = Binding of plasma Factor VII/VIIa to the tissue factor (TF) receptor initiates the coagulation protease cascades. 1 Binding binding NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 plasma plasma NOUN NN Number=Sing _ _ _ _ 4 Factor factor NOUN NN Number=Sing _ _ _ _ 5 VII VII PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 / / PUNCT , _ _ _ _ SpaceAfter=No 7 VIIa VIIa PROPN NNP Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 tissue tissue NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 TF TF NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 receptor receptor NOUN NN Number=Sing _ _ _ _ 16 initiates initiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 coagulation coagulation NOUN NN Number=Sing _ _ _ _ 19 protease protease NOUN NN Number=Sing _ _ _ _ 20 cascades cascade NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 843 # text = TF expression by circulating monocytes is associated with thrombotic and inflammatory complications in a variety of diseases. 1 TF Tf NOUN NN Number=Sing _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 by by SCONJ IN _ _ _ _ _ 4 circulating circulate VERB VBG VerbForm=Ger _ _ _ _ 5 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 thrombotic thrombotic ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 12 complications complication NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 variety variety NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 diseases disease NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 844 # text = Transcriptional activation of the human TF gene in monocytic cells exposed to bacterial lipopolysaccharide (LPS) is mediated by binding of c-Rel/p65 heterodimers to a kappa B site in the TF promoter. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 TF Tf NOUN NN Number=Sing _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 exposed expose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 14 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by SCONJ IN _ _ _ _ _ 21 binding bind VERB VBG VerbForm=Ger _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 / / PUNCT , _ _ _ _ SpaceAfter=No 27 p65 p65 NUM CD NumType=Card _ _ _ _ 28 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 kappa kappa NOUN NN Number=Sing _ _ _ _ 32 B b NOUN NN Number=Sing _ _ _ _ 33 site site NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 TF TF PROPN NNP Number=Sing _ _ _ _ 37 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 845 # text = Here, we report that a family of anti-inflammatory agents, known as the salicylates, inhibited LPS induction of TF activity and TF gene transcription in human monocytes and monocytic THP-1 cells at clinically relevant doses. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 family family NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 10 agents agent NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 salicylates salicylate NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 LPS LPS ADJ JJ Degree=Pos _ _ _ _ 19 induction induction NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 TF TF ADJ JJ Degree=Pos _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 TF Tf NOUN NN Number=Sing _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 32 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ _ 36 at at ADP IN _ _ _ _ _ 37 clinically clinically ADV RB _ _ _ _ _ 38 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 39 doses dos NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 846 # text = Furthermore, sodium salicylate blocked the LPS-induced proteolytic degradation of I kappa B alpha, which prevented the nuclear translocation of c-Rel/p65 heterodimers. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 sodium sodium ADJ JJ Degree=Pos _ _ _ _ 4 salicylate salicylate NOUN NN Number=Sing _ _ _ _ 5 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 proteolytic proteolytic ADJ JJ Degree=Pos _ _ _ _ 11 degradation degradation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 14 kappa kappa PROPN NNP Number=Sing _ _ _ _ 15 B B PROPN NNP Number=Sing _ _ _ _ 16 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 22 translocation translocation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 / / PUNCT , _ _ _ _ SpaceAfter=No 28 p65 p65 NUM CD NumType=Card _ _ _ _ 29 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 847 # text = In contrast, two other nonsteroidal anti-inflammatory drugs, ibuprofen and indomethacin, did not inhibit LPS induction of the TF gene. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 other other ADJ JJ Degree=Pos _ _ _ _ 6 nonsteroidal nonsteroidal ADJ JJ Degree=Pos _ _ _ _ 7 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 8 drugs drug NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 ibuprofen ibuprofen ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 indomethacin indomethacin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 17 LPS LPS ADJ JJ Degree=Pos _ _ _ _ 18 induction induction NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 TF TF PROPN NNP Number=Sing _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 848 # text = These results indicated that salicylates inhibited LPS induction of TF gene transcription in monocytic cells by preventing nuclear translocation of c-Rel/p65 heterodimers. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 salicylates salicylate PROPN NNPS Number=Plur _ _ _ _ 6 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 LPS LPS ADJ JJ Degree=Pos _ _ _ _ 8 induction induction NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 TF TF NOUN NN Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 by by SCONJ IN _ _ _ _ _ 17 preventing prevent VERB VBG VerbForm=Ger _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 translocation translocation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 / / PUNCT , _ _ _ _ SpaceAfter=No 25 p65 p65 NUM CD NumType=Card _ _ _ _ 26 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 849 # text = The clinical benefits of salicylates in the treatment of several diseases, including atherosclerosis and rheumatoid arthritis, may be related to their ability to reduce monocyte gene expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 3 benefits benefit NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 salicylates salicylate NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 treatment treatment NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 several several ADJ JJ Degree=Pos _ _ _ _ 11 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 including include VERB VBG VerbForm=Ger _ _ _ _ 14 atherosclerosis atherosclerosis NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 rheumatoid rheumatoid NOUN NN Number=Sing _ _ _ _ 17 arthritis arthritis NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 may may AUX MD VerbForm=Fin _ _ _ _ 20 be be AUX VB VerbForm=Inf _ _ _ _ 21 related related ADJ JJ Degree=Pos _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 ability ability NOUN NN Number=Sing _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 reduce reduce VERB VB VerbForm=Inf _ _ _ _ 27 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 850 # text = Document 003002314 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002314 003002314 NUM CD NumType=Card _ _ _ _ 3 ends. ends. NOUN NN Number=Sing _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 851 # text = CD30-dependent degradation of TRAF2: implications for negative regulation of TRAF signaling and the control of cell survival. 1 CD30 CD30 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 -dependent -dependent ADJ JJ Degree=Pos _ _ _ _ 3 degradation degradation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 TRAF2 TRAF2 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 : : PUNCT : _ _ _ _ _ 7 implications implication NOUN NNS Number=Plur _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 negative negative ADJ JJ Degree=Pos _ _ _ _ 10 regulation regulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 TRAF Traf NOUN NN Number=Sing _ _ _ _ 13 signaling signaling NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 control control NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 survival survival NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 852 # text = CD30 is a cell-surface receptor that can augment lymphocyte activation and survival through its ability to induce the transcription factor NF-kappaB. 1 CD30 CD30 PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 surface surface NOUN NN Number=Sing _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 can can AUX MD VerbForm=Fin _ _ _ _ 10 augment augment VERB VB VerbForm=Inf _ _ _ _ 11 lymphocyte lymphocyte ADJ JJ Degree=Pos _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 survival survival NOUN NN Number=Sing _ _ _ _ 15 through through ADP IN _ _ _ _ _ 16 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 17 ability ability NOUN NN Number=Sing _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 induce induce VERB VB VerbForm=Inf _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappaB. kappaB. PROPN NNP Number=Sing _ _ _ _ # sent_id = 853 # text = CD30, however, has also been implicated in the induction of apoptotic cell death of lymphocytes. 1 CD30 CD30 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 however however ADV RB _ _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 induction induction NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 death death NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 854 # text = Here we show that one of the effects of CD30 signal transduction is to render cells sensitive to apoptosis induced by the type 1 tumor necrosis factor receptor (TNFR1). 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 one one NUM CD NumType=Card _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 effects effect NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 CD30 CD30 NUM CD NumType=Card _ _ _ _ 11 signal signal NOUN NN Number=Sing _ _ _ _ 12 transduction transduction NOUN NN Number=Sing _ _ _ _ 13 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 render render VERB VB VerbForm=Inf _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 type type NOUN NN Number=Sing _ _ _ _ 24 1 1 NUM CD NumType=Card _ _ _ _ 25 tumor tumor NOUN NN Number=Sing _ _ _ _ 26 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ _ 28 receptor receptor NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 TNFR1 TNFR1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 855 # text = This sensitization is dependent on the TRAF-binding sites within the CD30 cytoplasmic domain. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 sensitization sensitization NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 TRAF Traf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 sites site NOUN NNS Number=Plur _ _ _ _ 11 within within ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 CD30 CD30 PROPN NNP Number=Sing _ _ _ _ 14 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 15 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 856 # text = One of the proteins that binds to these sites is TRAF2, a signal transduction molecule that is also utilized by TNFR1 to mediate the activation of several downstream kinases and transcription factors. 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 proteins protein NOUN NNS Number=Plur _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 9 sites site NOUN NNS Number=Plur _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 TRAF2 TRAF2 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 signal signal NOUN NN Number=Sing _ _ _ _ 15 transduction transduction NOUN NN Number=Sing _ _ _ _ 16 molecule molecule NOUN NN Number=Sing _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 also also ADV RB _ _ _ _ _ 20 utilized utilize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 TNFR1 tNFR1 PROPN NNP Number=Sing _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 several several ADJ JJ Degree=Pos _ _ _ _ 29 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 30 kinases kinase NOUN NNS Number=Plur _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 transcription transcription NOUN NN Number=Sing _ _ _ _ 33 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 857 # text = During CD30 signal transduction, we found that binding of TRAF2 to the cytoplasmic domain of CD30 results in the rapid depletion of TRAF2 and the associated protein TRAF1 by proteolysis. 1 During during ADP IN _ _ _ _ _ 2 CD30 CD30 NUM CD NumType=Card _ _ _ _ 3 signal signal NOUN NN Number=Sing _ _ _ _ 4 transduction transduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 TRAF2 Traf2 NUM CD NumType=Card _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 15 domain domain NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 CD30 CD30 NUM CD NumType=Card _ _ _ _ 18 results result NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 22 depletion depletion NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 TRAF2 TRAF2 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 protein protein NOUN NN Number=Sing _ _ _ _ 29 TRAF1 tRAF1 NUM CD NumType=Card _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 proteolysis proteolysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 858 # text = These data suggest a model in which CD30 limits its own ability to transduce cell survival signals through signal-coupled depletion of TRAF2. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 model model NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 CD30 CD30 PROPN NNP Number=Sing _ _ _ _ 9 limits limit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 11 own own ADJ JJ Degree=Pos _ _ _ _ 12 ability ability NOUN NN Number=Sing _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 transduce transduce VERB VB VerbForm=Inf _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 survival survival NOUN NN Number=Sing _ _ _ _ 17 signals signal NOUN NNS Number=Plur _ _ _ _ 18 through through ADP IN _ _ _ _ _ 19 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 coupled coupl VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 depletion depletion NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 TRAF2 TRAF2 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 859 # text = Depletion of intracellular TRAF2 and its coassociated proteins also increased the sensitivity of the cell to undergoing apoptosis during activation of death-inducing receptors such as TNFR1. 1 Depletion Depletion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 4 TRAF2 Traf2 NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 7 coassociated coassociate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 proteins protein NOUN NNS Number=Plur _ _ _ _ 9 also also ADV RB _ _ _ _ _ 10 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 undergoing undergoing ADJ JJ Degree=Pos _ _ _ _ 18 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 19 during during ADP IN _ _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 25 receptors receptor NOUN NNS Number=Plur _ _ _ _ 26 such such ADJ JJ Degree=Pos _ _ _ _ 27 as as ADP IN _ _ _ _ _ 28 TNFR1 TNFR1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 860 # text = Consistent with this hypothesis, expression of a dominant-negative form of TRAF2 was found to potentiate TNFR1-mediated death. 1 Consistent consistent ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 hypothesis hypothesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 dominant dominant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 negative negative ADJ JJ Degree=Pos _ _ _ _ 12 form form NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 TRAF2 TRAF2 NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 potentiate potentiate VERB VB VerbForm=Inf _ _ _ _ 19 TNFR1 tNFR1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 861 # text = These studies provide a potential mechanism through which CD30, as well as other TRAF-binding members of the TNFR superfamily, can negatively regulate cell survival. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 potential potential NOUN NN Number=Sing _ _ _ _ 6 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 7 through through ADP IN _ _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 CD30 CD30 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 as as ADV RB _ _ _ _ _ 12 well well ADV RB Degree=Pos _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 other other ADJ JJ Degree=Pos _ _ _ _ 15 TRAF Traf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 binding binding VERB VBG VerbForm=Ger _ _ _ _ 18 members member NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 TNFR TNFR PROPN NNP Number=Sing _ _ _ _ 22 superfamily superfamily ADV RB _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 can can AUX MD VerbForm=Fin _ _ _ _ 25 negatively negatively ADV RB _ _ _ _ _ 26 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 survival survival NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 862 # text = Document 003002320 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002320 003002320 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 863 # text = Calcineurin acts in synergy with PMA to inactivate I kappa B/MAD3, an inhibitor of NF-kappa B. 1 Calcineurin Calcineurin VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 acts act NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 synergy synergy NOUN NN Number=Sing _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 PMA PMA PROPN NNP Number=Sing _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 inactivate inactivate VERB VB VerbForm=Inf _ _ _ _ 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B/ B/ PUNCT HYPH _ _ _ _ SpaceAfter=No 12 MAD3 MAD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 864 # text = The interleukin-2 (IL-2) promoter consists of several independent T cell receptor (TcR) responsive elements. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 consists consist NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 several several ADJ JJ Degree=Pos _ _ _ _ 14 independent independent ADJ JJ Degree=Pos _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 TcR TcR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 22 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 865 # text = The induction of promoters dependent on these elements is inhibitable by the immunosuppressants cyclosporin A (CsA) and tacrolimus (FK-506). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 promoters promoter NOUN NNS Number=Plur _ _ _ _ 5 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 elements element NOUN NNS Number=Plur _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 inhibitable inhibitable ADJ JJ Degree=Pos _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 immunosuppressants immunosuppressant NOUN NNS Number=Plur _ _ _ _ 14 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 15 A A PROPN NNP Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 tacrolimus tacrolimus NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 FK FK NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - SYM SYM _ _ _ _ SpaceAfter=No 24 506 506 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 866 # text = Calcineurin, a Ca2+/calmodulin-dependent protein phosphatase, is the FK-506- and CsA-sensitive enzyme required for TcR mediated activation of the IL-2 promoter. 1 Calcineurin Calcineurin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 Ca2+/calmodulin Ca2+/calmodulin NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 phosphatase phosphatase NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 FK FK NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 506 506 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 20 enzyme enzyme NOUN NN Number=Sing _ _ _ _ 21 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 TcR TcR PROPN NNP Number=Sing _ _ _ _ 24 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 2 2 NUM CD NumType=Card _ _ _ _ 31 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 867 # text = We report that a constitutively active form of calcineurin partially substitutes for the Ca2+ co-stimulus required to activate the IL-2 promoter elements IL-2A (which binds the factors OAP and Oct-1) and IL-2E (which binds NF-AT), and completely substitutes for the Ca2+ co-stimulus required to stimulate an NF-kappa B-dependent element. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 constitutively constitutively ADV RB _ _ _ _ _ 6 active active ADJ JJ Degree=Pos _ _ _ _ 7 form form NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 10 partially partially ADV RB _ _ _ _ _ 11 substitutes substitute VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 Ca2 ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 + + SYM SYM _ _ _ _ _ 16 co-stimulus co-stimulus NOUN NN Number=Sing _ _ _ _ 17 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 activate activate VERB VB VerbForm=Inf _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ _ 24 promoter promoter NOUN NN Number=Sing _ _ _ _ 25 elements element NOUN NNS Number=Plur _ _ _ _ 26 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 A a NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 which which PRON WDT PronType=Rel _ _ _ _ 32 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 factors factor NOUN NNS Number=Plur _ _ _ _ 35 OAP OAP PROPN NNP Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT , _ _ _ _ SpaceAfter=No 39 1 1 X LS _ _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 2E 2E PROPN NNP Number=Sing _ _ _ _ 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 which which PRON WDT PronType=Int _ _ _ _ 47 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 48 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 AT at PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 and and CCONJ CC _ _ _ _ _ 54 completely completely ADV RB _ _ _ _ _ 55 substitutes substitute VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 56 for for ADP IN _ _ _ _ _ 57 the the DET DT Definite=Def|PronType=Art _ _ _ _ 58 Ca2 ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 + + SYM SYM _ _ _ _ _ 60 co-stimulus co-stimulus NOUN NN Number=Sing _ _ _ _ 61 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 62 to to PART TO _ _ _ _ _ 63 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 64 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 65 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 66 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 67 kappa kappa NOUN NN Number=Sing _ _ _ _ 68 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 69 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 70 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 71 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 72 . . PUNCT . _ _ _ _ _ # sent_id = 868 # text = Calcineurin stimulates the NF-kappa B element by enhancing inactivation of I kappa B/MAD3, an inhibitor of NF-kappa B, thereby increasing the amount of nuclear NF-kappa B DNA binding activity. 1 Calcineurin Calcineurin PROPN NNP Number=Sing _ _ _ _ 2 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 element element NOUN NN Number=Sing _ _ _ _ 9 by by SCONJ IN _ _ _ _ _ 10 enhancing enhance VERB VBG VerbForm=Ger _ _ _ _ 11 inactivation inactivation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B/ B/ PUNCT HYPH _ _ _ _ SpaceAfter=No 16 MAD3 MAD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa PROPN NNP Number=Sing _ _ _ _ 24 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 thereby thereby ADV RB _ _ _ _ _ 27 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 amount amount NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 32 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappa kappa NOUN NN Number=Sing _ _ _ _ 35 B b NOUN NN Number=Sing _ _ _ _ 36 DNA dna NOUN NN Number=Sing _ _ _ _ 37 binding binde VERB VBG VerbForm=Ger _ _ _ _ 38 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 869 # text = These data provide the first demonstration in vivo that activation of a protein phosphatase can inactivate I kappa B, and suggest one possible explanation for mechanism-based toxicities associated with FK-506 and CsA by demonstrating that these drugs can inhibit the calcineurin-dependent activation of a virtually ubiquitous transcription factor. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 provide provide VERB VB VerbForm=Inf _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 6 demonstration demonstration NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 vivo vivo NOUN NN Number=Sing _ _ _ _ 9 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 15 can can AUX MD VerbForm=Fin _ _ _ _ 16 inactivate inactivate VERB VB VerbForm=Inf _ _ _ _ 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 23 one one NUM CD NumType=Card _ _ _ _ 24 possible possible ADJ JJ Degree=Pos _ _ _ _ 25 explanation explanation NOUN NN Number=Sing _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 toxicities toxicity NOUN NNS Number=Plur _ _ _ _ 31 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 FK FK NUM CD NumType=Card _ _ _ SpaceAfter=No 34 - - SYM SYM _ _ _ _ SpaceAfter=No 35 506 506 NUM CD NumType=Card _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 CsA csa PROPN NNP Number=Sing _ _ _ _ 38 by by SCONJ IN _ _ _ _ _ 39 demonstrating demonstrat VERB VBG VerbForm=Ger _ _ _ _ 40 that that SCONJ IN _ _ _ _ _ 41 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 42 drugs drug NOUN NNS Number=Plur _ _ _ _ 43 can can AUX MD VerbForm=Fin _ _ _ _ 44 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 49 activation activation NOUN NN Number=Sing _ _ _ _ 50 of of ADP IN _ _ _ _ _ 51 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 52 virtually virtually ADV RB _ _ _ _ _ 53 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 54 transcription transcription NOUN NN Number=Sing _ _ _ _ 55 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 870 # text = Document 003002321 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002321 003002321 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 871 # text = Active suppression of the class II transactivator-encoding AIR-1 locus is responsible for the lack of major histocompatibility complex class II gene expression observed during differentiation from B cells to plasma cells. 1 Active active ADJ JJ Degree=Pos _ _ _ _ 2 suppression suppression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 class class NOUN NN Number=Sing _ _ _ _ 6 II ii NUM CD NumType=Card _ _ _ _ 7 transactivator transactivator NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 10 AIR AIR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 locus locus NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 lack lack NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 major major ADJ JJ Degree=Pos _ _ _ _ 21 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 22 complex complex NOUN NN Number=Sing _ _ _ _ 23 class class NOUN NN Number=Sing _ _ _ _ 24 II ii NUM CD NumType=Card _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 during during ADP IN _ _ _ _ _ 29 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 30 from from ADP IN _ _ _ _ _ 31 B b ADJ JJ Degree=Pos _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 plasma plasma NOUN NN Number=Sing _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 872 # text = In this study the genetic control of major histocompatibility complex (MHC) class II gene expression during the transition from B cell to plasma cell has been analyzed. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 6 control control NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 major major ADJ JJ Degree=Pos _ _ _ _ 9 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 10 complex complex NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 MHC MHC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 class class NOUN NN Number=Sing _ _ _ _ 15 II ii NUM CD NumType=Card _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 during during ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 transition transition NOUN NN Number=Sing _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 plasma plasma NOUN NN Number=Sing _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 29 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 873 # text = Class II molecules are not expressed in plasma cells because of an active suppression resulting in the abrogation of class II gene transcription. 1 Class class VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 II ii NUM CD NumType=Card _ _ _ _ 3 molecules molecule NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 plasma plasma NOUN NN Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 because because ADP IN _ _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 active active ADJ JJ Degree=Pos _ _ _ _ 14 suppression suppression NOUN NN Number=Sing _ _ _ _ 15 resulting result VERB VBG VerbForm=Ger _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 abrogation abrogation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 class class NOUN NN Number=Sing _ _ _ _ 21 II ii NUM CD NumType=Card _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 874 # text = We show here that the plasma cell-specific repressor function, designated SIR (suppressor of immune response genes), does not act directly on the transcription of class II genes, but instead on the transcription of the AIR-1 gene, whose product, the class II transactivator (CIITA), is fundamental for the regulation of the constitutive and inducible expression of MHC class II genes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 plasma plasma NOUN NN Number=Sing _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 repressor repressor NOUN NN Number=Sing _ _ _ _ 11 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 SIR Sir NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 suppressor suppressor NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 immune immune ADJ JJ Degree=Pos _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 not not PART RB _ _ _ _ _ 25 act act VERB VB VerbForm=Inf _ _ _ _ 26 directly directly ADV RB _ _ _ _ _ 27 on on ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 class class NOUN NN Number=Sing _ _ _ _ 32 II ii NUM CD NumType=Card _ _ _ _ 33 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 but but CCONJ CC _ _ _ _ _ 36 instead instead ADV RB _ _ _ _ _ 37 on on ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 transcription transcription NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 AIR Air PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 1 1 NUM CD NumType=Card _ _ _ _ 45 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 48 product product NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 class class NOUN NN Number=Sing _ _ _ _ 52 II ii NUM CD NumType=Card _ _ _ _ 53 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 54 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 55 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 56 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 57 , , PUNCT , _ _ _ _ _ 58 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 59 fundamental fundamental ADJ JJ Degree=Pos _ _ _ _ 60 for for ADP IN _ _ _ _ _ 61 the the DET DT Definite=Def|PronType=Art _ _ _ _ 62 regulation regulation NOUN NN Number=Sing _ _ _ _ 63 of of ADP IN _ _ _ _ _ 64 the the DET DT Definite=Def|PronType=Art _ _ _ _ 65 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 66 and and CCONJ CC _ _ _ _ _ 67 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 68 expression expression NOUN NN Number=Sing _ _ _ _ 69 of of ADP IN _ _ _ _ _ 70 MHC MHC PROPN NNP Number=Sing _ _ _ _ 71 class class NOUN NN Number=Sing _ _ _ _ 72 II ii NUM CD NumType=Card _ _ _ _ 73 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 74 . . PUNCT . _ _ _ _ _ # sent_id = 875 # text = This was unambiguously demonstrated by the fact that plasmacytoma x B cell hybrids carrying an AIR-1 locus derived from CIITA-expressing cells do not express CIITA-specific transcripts. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 unambiguously unambiguously ADV RB _ _ _ _ _ 4 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 fact fact NOUN NN Number=Sing _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 plasmacytoma plasmacytoma NOUN NN Number=Sing _ _ _ _ 10 x x SYM SYM _ _ _ _ _ 11 B b ADJ JJ Degree=Pos _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 hybrids hybrid NOUN NNS Number=Plur _ _ _ _ 14 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 AIR AIR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 locus locus NOUN NN Number=Sing _ _ _ _ 20 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 expressing expresse ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 not not PART RB _ _ _ _ _ 28 express express VERB VB VerbForm=Inf _ _ _ _ 29 CIITA CIITa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 specific specific ADJ JJ Degree=Pos _ _ _ _ 32 transcripts transcript NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 876 # text = Transfection of a cDNA containing the human CIITA coding sequence under the control of an heterologous promoter restores expression of human MHC class II genes in the hybrids and is responsible for de novo expression of mouse MHC class II genes in both the mouse plasmacytoma cell line and the hybrids. 1 Transfection Transfection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 5 containing contain VERB VBG VerbForm=Ger _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 CIITA CIITa NOUN NN Number=Sing _ _ _ _ 9 coding code NOUN NN Number=Sing _ _ _ _ 10 sequence sequence NOUN NN Number=Sing _ _ _ _ 11 under under ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 control control NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 restores restore NOUN NNS Number=Plur _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 MHC MHC PROPN NNP Number=Sing _ _ _ _ 23 class class NOUN NN Number=Sing _ _ _ _ 24 II ii NUM CD NumType=Card _ _ _ _ 25 genes gene NOUN NNS Number=Plur _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 hybrids hybrid NOUN NNS Number=Plur _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 de de PROPN NNP Number=Sing _ _ _ _ 34 novo novo PROPN NNP Number=Sing _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 mouse mouse NOUN NN Number=Sing _ _ _ _ 38 MHC MHC PROPN NNP Number=Sing _ _ _ _ 39 class class NOUN NN Number=Sing _ _ _ _ 40 II ii NUM CD NumType=Card _ _ _ _ 41 genes gene NOUN NNS Number=Plur _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 both both CCONJ CC _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 mouse mouse NOUN NN Number=Sing _ _ _ _ 46 plasmacytoma plasmacytoma NOUN NN Number=Sing _ _ _ _ 47 cell cell NOUN NN Number=Sing _ _ _ _ 48 line line NOUN NN Number=Sing _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 hybrids hybrid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 877 # text = These results confirm and extend the notion of the functional conservation of the AIR-1 gene product across species barriers. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 confirm confirm VERB VB VerbForm=Inf _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 extend extend VERB VB VerbForm=Inf _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 notion notion NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 functional functional ADJ JJ Degree=Pos _ _ _ _ 11 conservation conservation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 AIR Air PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 product product NOUN NN Number=Sing _ _ _ _ 19 across across ADP IN _ _ _ _ _ 20 species species NOUN NNS Number=Plur _ _ _ _ 21 barriers barrier NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 878 # text = Interestingly, in CIITA-transfected cell hybrids, cell surface expression of the human HLA-DQ heterodimer was not observed. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 hybrids hybrid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 surface surface NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 DQ Dq PROPN NNP Number=Sing _ _ _ _ 19 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 879 # text = This result was not attributable to lack of HLA-DQ alpha or -DQ beta transcription, because both transcripts were present in the CIITA-transfected hybrids, although at reduced levels. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 result result NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 attributable attributable ADJ JJ Degree=Pos _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 lack lack NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 DQ Dq PROPN NNP Number=Sing _ _ _ _ 12 alpha alpha NOUN NN Number=Sing _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 DQ Dq ADJ JJ Degree=Pos _ _ _ _ 16 beta beta NOUN NN Number=Sing _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 because because SCONJ IN _ _ _ _ _ 20 both both DET DT _ _ _ _ _ 21 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 present present ADJ JJ Degree=Pos _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 hybrids hybrid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 although although SCONJ IN _ _ _ _ _ 32 at at ADP IN _ _ _ _ _ 33 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 880 # text = These findings further support our previous observations on the distinct regulation of expression of the human HLA-DQ class II subset, which may be thus controlled at the posttranscriptional level by a CIITA-independent mechanism. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 further further ADV RB _ _ _ _ _ 4 support support VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 5 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 6 previous previous ADJ JJ Degree=Pos _ _ _ _ 7 observations observation NOUN NNS Number=Plur _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 11 regulation regulation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 HLA HLa NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 DQ Dq NOUN NN Number=Sing _ _ _ _ 20 class class NOUN NN Number=Sing _ _ _ _ 21 II ii NUM CD NumType=Card _ _ _ _ 22 subset subset NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 may may AUX MD VerbForm=Fin _ _ _ _ 26 be be AUX VB VerbForm=Inf _ _ _ _ 27 thus thus ADV RB _ _ _ _ _ 28 controlled control VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 at at ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 posttranscriptional posttranscriptional ADJ JJ Degree=Pos _ _ _ _ 32 level level NOUN NN Number=Sing _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 independent independent ADJ JJ Degree=Pos _ _ _ _ 38 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 881 # text = Document 003002324 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002324 003002324 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 882 # text = Suppression of NF-kappaB activation in normal T cells by supernatant fluid from human renal cell carcinomas. 1 Suppression Suppression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 normal normal ADJ JJ Degree=Pos _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 supernatant supernatant ADJ JJ Degree=Pos _ _ _ _ 13 fluid fluid NOUN NN Number=Sing _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 renal renal ADJ JJ Degree=Pos _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 carcinomas carcinoma NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 883 # text = T lymphocytes from patients with renal cell carcinoma (RCC) show reduced immune function and impaired activation of the transcription factor, NF-kappaB. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 patients patient NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 renal renal ADJ JJ Degree=Pos _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 carcinoma carcinoma NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 RCC RCC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 immune immune ADJ JJ Degree=Pos _ _ _ _ 15 function function NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 impaired impaire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 884 # text = We determined the mechanism of NF-kappaB suppression in T cells of RCC patient and determined whether supernatant fluid from RCC explants (RCC-S) induced the same phenotype of NF-kappaB suppression in normal T cells that is observed in patient T cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 determined determine VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 suppression suppression NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 RCC Rcc NOUN NN Number=Sing _ _ _ _ 15 patient patient NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 determined determine VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 whether whether SCONJ IN _ _ _ _ _ 19 supernatant supernatant ADJ JJ Degree=Pos _ _ _ _ 20 fluid fluid NOUN NN Number=Sing _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 RCC RCC PROPN NNP Number=Sing _ _ _ _ 23 explants explant NOUN NNS Number=Plur _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 RCC RCC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 S s PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 same same ADJ JJ Degree=Pos _ _ _ _ 32 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 37 suppression suppression NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 normal normal ADJ JJ Degree=Pos _ _ _ _ 40 T t PROPN NNP Number=Sing _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ _ 42 that that PRON WDT PronType=Rel _ _ _ _ 43 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 44 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 patient patient ADJ JJ Degree=Pos _ _ _ _ 47 T t PROPN NNP Number=Sing _ _ _ _ 48 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 885 # text = The pattern of kappaB-binding activity in T cells of RCC patient was altered as compared to that seen in T cells obtained from normal volunteers. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 pattern pattern NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 RCC RCC PROPN NNP Number=Sing _ _ _ _ 13 patient patient NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 altered alter VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 20 seen see NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 obtained obtaine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 from from ADP IN _ _ _ _ _ 26 normal normal ADJ JJ Degree=Pos _ _ _ _ 27 volunteers volunteer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 886 # text = In some patients, no activation of RelA/NFkappaB1-binding activity was detectable, while in others kappaB-binding activity was modestly induced but the duration was reduced. 1 In in ADP IN _ _ _ _ _ 2 some some DET DT _ _ _ _ _ 3 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 no no DET DT _ _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 RelA/NFkappaB1 RelA/NFkappaB1 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 binding binding VERB VBG VerbForm=Ger _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 detectable detectable ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 while while SCONJ IN _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 others other NOUN NNS Number=Plur _ _ _ _ 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 binding binding VERB VBG VerbForm=Ger _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 modestly modestly ADV RB _ _ _ _ _ 24 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 but but CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 duration duration NOUN NN Number=Sing _ _ _ _ 28 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 29 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 887 # text = IkappaBalpha was degraded normally following stimulation in both normal controls and T cells from RCC patients. 1 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 degraded degrad VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 normally normally ADV RB _ _ _ _ _ 5 following follow VERB VBG VerbForm=Ger _ _ _ _ 6 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 both both DET DT _ _ _ _ _ 9 normal normal ADJ JJ Degree=Pos _ _ _ _ 10 controls control NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 RCC RCC PROPN NNP Number=Sing _ _ _ _ 16 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 888 # text = RCC-S did not alter the cytoplasmic levels of RelA and NF-kappaB1 but did suppress their nuclear localization and inhibited the activation of RelA/NF-kappaB1 binding complexes. 1 RCC RCC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 S S PROPN NNP Number=Sing _ _ _ _ 4 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 alter alter VERB VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 9 levels level NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 RelA RelA PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB1 kappaB1 PROPN NNP Number=Sing _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 19 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 localization localization NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 RelA RelA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 / / PUNCT , _ _ _ _ SpaceAfter=No 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappaB1 kappaB1 PROPN NNP Number=Sing _ _ _ _ 32 binding binding VERB VBG VerbForm=Ger _ _ _ _ 33 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 889 # text = These results show that RCC-S can induce in normal T cells the same phenotype of impaired NF-kappaB activation that is detected in T cells of RCC patient. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 RCC RCC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 S s PROPN NNP Number=Sing _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 induce induce VERB VB VerbForm=Inf _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 normal normal ADJ JJ Degree=Pos _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 same same ADJ JJ Degree=Pos _ _ _ _ 16 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 impaired impaire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ _ 23 that that PRON WDT PronType=Rel _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 T t PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 RCC RCC NOUN NN Number=Sing _ _ _ _ 31 patient patient NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 890 # text = It also appears that NF-kappaB suppression by RCC-S may contribute to the immunosuppression of host immunity. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 suppression suppression NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 RCC RCC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 S s PROPN NNP Number=Sing _ _ _ _ 13 may may AUX MD VerbForm=Fin _ _ _ _ 14 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 immunosuppression immunosuppression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 host host NOUN NN Number=Sing _ _ _ _ 20 immunity immunity NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 891 # text = Document 003002325 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002325 003002325 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 892 # text = An isotype-specific activator of major histocompatibility complex (MHC) class II genes that is independent of class II transactivator. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 isotype-specific isotype-specific ADJ JJ Degree=Pos _ _ _ _ 3 activator activator NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 major major ADJ JJ Degree=Pos _ _ _ _ 6 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 7 complex complex NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 MHC MHC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 class class NOUN NN Number=Sing _ _ _ _ 12 II ii NUM CD NumType=Card _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 independent independent ADJ JJ Degree=Pos _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 class class NOUN NN Number=Sing _ _ _ _ 19 II ii NUM CD NumType=Card _ _ _ _ 20 transactivator transactivator NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 893 # text = Patients with one type of major histocompatibility complex class II combined immunodeficiency have mutations in a gene termed class II transactivator (CIITA), which coordinately controls the transcription of the three major human class II genes, HLA-DR, -DQ, and -DP. 1 Patients patient NOUN NNS Number=Plur _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 one one NUM CD NumType=Card _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 major major ADJ JJ Degree=Pos _ _ _ _ 7 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 8 complex complex NOUN NN Number=Sing _ _ _ _ 9 class class NOUN NN Number=Sing _ _ _ _ 10 II ii NUM CD NumType=Card _ _ _ _ 11 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 13 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 mutations mutation NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 class class NOUN NN Number=Sing _ _ _ _ 20 II ii NUM CD NumType=Card _ _ _ _ 21 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 which which PRON WDT PronType=Rel _ _ _ _ 27 coordinately coordinately ADV RB _ _ _ _ _ 28 controls control VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 three three NUM CD NumType=Card _ _ _ _ 34 major major ADJ JJ Degree=Pos _ _ _ _ 35 human human ADJ JJ Degree=Pos _ _ _ _ 36 class class NOUN NN Number=Sing _ _ _ _ 37 II ii NUM CD NumType=Card _ _ _ _ 38 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 DR dr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 DQ Dq NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 DP DP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 894 # text = However, the experimentally derived B-lymphoblastoid cell line, clone 13, expresses high levels of HLADQ in the absence of HLA-DR and HLA-DP, despite its mapping by complementation analysis to this group. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 experimentally experimentally ADV RB _ _ _ _ _ 5 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 lymphoblastoid lymphoblastoid NOUN NN Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 clone clone NOUN NN Number=Sing _ _ _ _ 13 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 expresses expresse VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 high high ADJ JJ Degree=Pos _ _ _ _ 17 levels level NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 HLADQ HLADq NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 absence absence NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 DR dr PROPN NNP Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 DP DP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 despite despite ADP IN _ _ _ _ _ 33 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 34 mapping mapping NOUN NN Number=Sing _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 complementation complementation NOUN NN Number=Sing _ _ _ _ 37 analysis analysis NOUN NN Number=Sing _ _ _ _ 38 to to ADP IN _ _ _ _ _ 39 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 40 group group NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 895 # text = It was possible that one of the clone 13 CIITA alleles bore a mutation that allowed HLA-DQ, but not HLA-DR or -DP transcription. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 possible possible ADJ JJ Degree=Pos _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 one one NUM CD NumType=Card _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 clone clone NOUN NN Number=Sing _ _ _ _ 9 13 13 NUM CD NumType=Card _ _ _ _ 10 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 11 alleles allele NOUN NNS Number=Plur _ _ _ _ 12 bore bear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 mutation mutation NOUN NN Number=Sing _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 allowed allow VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 DQ Dq PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 but but CCONJ CC _ _ _ _ _ 22 not not ADV RB _ _ _ _ _ 23 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 DR dr PROPN NNP Number=Sing _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 DP Dp ADJ JJ Degree=Pos _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 896 # text = Alternatively, another factor, distinct from CIITA, might control HLA-DQ expression. 1 Alternatively Alternatively ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 another another DET DT _ _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 might might AUX MD VerbForm=Fin _ _ _ _ 11 control control VERB VB VerbForm=Inf _ _ _ _ 12 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 DQ Dq PROPN NNP Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 897 # text = We report here that ectopic expression of CIITA cDNAs derived by reverse transcriptase polymerase chain reaction from clone 13 do not restore expression of HLA-DQ in another CIITA-deficient cell line, RJ2.2.5. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 ectopic ectopic ADJ JJ Degree=Pos _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 9 cDNAs cDNAs NOUN NNS Number=Plur _ _ _ _ 10 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 reverse reverse NOUN NN Number=Sing _ _ _ _ 13 transcriptase transcriptase NOUN NN Number=Sing _ _ _ _ 14 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 15 chain chain NOUN NN Number=Sing _ _ _ _ 16 reaction reaction NOUN NN Number=Sing _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 clone clone NOUN NN Number=Sing _ _ _ _ 19 13 13 NUM CD NumType=Card _ _ _ _ 20 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 restore restore VERB VB VerbForm=Inf _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 DQ Dq PROPN NNP Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 another another DET DT _ _ _ _ _ 30 CIITA CIITa NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 33 cell cell NOUN NN Number=Sing _ _ _ _ 34 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 RJ RJ PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 2.2.5 2.2.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 898 # text = In addition, no CIITA protein is detectable in clone 13 nuclear extracts. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 no no DET DT _ _ _ _ _ 5 CIITA CIITa NOUN NN Number=Sing _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 clone clone NOUN NN Number=Sing _ _ _ _ 11 13 13 NUM CD NumType=Card _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 899 # text = In contrast, somatic cell fusion between clone 13 and RJ2.2.5 restored expression of the HLA-DQ haplotype encoded by the RJ2.2.5 DQB gene. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 somatic somatic ADJ JJ Degree=Pos _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 fusion fusion NOUN NN Number=Sing _ _ _ _ 7 between between ADP IN _ _ _ _ _ 8 clone clone NOUN NN Number=Sing _ _ _ _ 9 13 13 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 RJ2.2.5 RJ2.2.5 NUM CD NumType=Card _ _ _ _ 12 restored restore VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 DQ Dq PROPN NNP Number=Sing _ _ _ _ 19 haplotype haplotype NOUN NN Number=Sing _ _ _ _ 20 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 RJ2.2.5 RJ2.2.5 PROPN NNP Number=Sing _ _ _ _ 24 DQB DQB PROPN NNP Number=Sing _ _ _ _ 25 gene gene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 900 # text = Taken together, these data demonstrate the existence of an HLA-DQ isotype-specific trans-acting factor, which functions independently of CIITA. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 data data NOUN NN Number=Sing _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 existence existence NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 HLA HLa NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 DQ Dq NOUN NN Number=Sing _ _ _ _ 14 isotype-specific isotype-specific ADJ JJ Degree=Pos _ _ _ _ 15 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 acting act VERB VBG VerbForm=Ger _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 which which PRON WDT PronType=Rel _ _ _ _ 21 functions function VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 independently independently ADV RB _ _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 901 # text = Document 003002328 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002328 003002328 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 902 # text = CIITA activates the expression of MHC class II genes in mouse T cells. 1 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 2 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 MHC MHC PROPN NNP Number=Sing _ _ _ _ 7 class class NOUN NN Number=Sing _ _ _ _ 8 II ii NUM CD NumType=Card _ _ _ _ 9 genes gene NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 mouse mouse NOUN NN Number=Sing _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 903 # text = It has long been a puzzle that MHC class II molecules are expressed in human T cells after activation but not in mouse T cells; this expression is believed to play a role in the cell mediated immune response. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 long long ADV RB Degree=Pos _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 puzzle puzzle NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 MHC MHC PROPN NNP Number=Sing _ _ _ _ 9 class class NOUN NN Number=Sing _ _ _ _ 10 II ii NUM CD NumType=Card _ _ _ _ 11 molecules molecule NOUN NNS Number=Plur _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 after after ADP IN _ _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 mouse mouse NOUN NN Number=Sing _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 ; ; PUNCT , _ _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 believed believe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 play play VERB VB VerbForm=Inf _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 role role NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 immune immune ADJ JJ Degree=Pos _ _ _ _ 40 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 904 # text = Recently the MHC class II transactivator (CIITA) has been reported to be a major regulatory factor for both the constitutive and IFN inducible expression of MHC class II genes. 1 Recently recently ADV RB _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 MHC MHC PROPN NNP Number=Sing _ _ _ _ 4 class class NOUN NN Number=Sing _ _ _ _ 5 II ii NUM CD NumType=Card _ _ _ _ 6 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 12 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 major major ADJ JJ Degree=Pos _ _ _ _ 17 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 both both CCONJ CC _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 IFN Ifn ADJ JJ Degree=Pos _ _ _ _ 25 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 MHC MHC PROPN NNP Number=Sing _ _ _ _ 29 class class NOUN NN Number=Sing _ _ _ _ 30 II ii NUM CD NumType=Card _ _ _ _ 31 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 905 # text = Here we show that human T cells expressing MHC class II have CIITA transcripts while MHC class II-negative human T cells and mouse T cells do not. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 9 MHC MHC PROPN NNP Number=Sing _ _ _ _ 10 class class NOUN NN Number=Sing _ _ _ _ 11 II II PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 12 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 CIITA CIITa NOUN NN Number=Sing _ _ _ _ 14 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 15 while while SCONJ IN _ _ _ _ _ 16 MHC MHC PROPN NNP Number=Sing _ _ _ _ 17 class class NOUN NN Number=Sing _ _ _ _ 18 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 negative negative ADJ JJ Degree=Pos _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 mouse mouse NOUN NN Number=Sing _ _ _ _ 26 T t PROPN NNP Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 do do VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 not not PART RB _ _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 906 # text = The expression of MHC class II genes in mouse T cells can be reconstituted upon transfection with the human CIITA cDNA. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 MHC MHC PROPN NNP Number=Sing _ _ _ _ 5 class class NOUN NN Number=Sing _ _ _ _ 6 II ii NUM CD NumType=Card _ _ _ _ 7 genes gene NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 mouse mouse NOUN NN Number=Sing _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 can can AUX MD VerbForm=Fin _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 reconstituted reconstitute VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 upon upon ADP IN _ _ _ _ _ 16 transfection transfection NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 21 cDNA cDNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 907 # text = These data indicate that the expression of CIITA explains the expression or lack of expression of MHC class II in human and mouse T cells respectively. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 9 explains explain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 lack lack NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 MHC MHC PROPN NNP Number=Sing _ _ _ _ 18 class class NOUN NN Number=Sing _ _ _ _ 19 II ii NUM CD NumType=Card _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 human human NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 mouse mouse NOUN NN Number=Sing _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 908 # text = Document 003002330 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002330 003002330 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 909 # text = Silencing of human fetal globin expression is impaired in the absence of the adult beta-globin gene activator protein EKLF. 1 Silencing Silencing NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 5 globin globin NOUN NN Number=Sing _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 impaired impaire VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 absence absence NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 adult adult NOUN NN Number=Sing _ _ _ _ 15 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 globin globin NOUN NN Number=Sing _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 activator activator NOUN NN Number=Sing _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 EKLF Eklf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 910 # text = Globin genes are subject to tissue-specific and developmental stage-specific regulation. 1 Globin Globin ADJ JJ Degree=Pos _ _ _ _ 2 genes gene NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 subject subject ADJ JJ Degree=Pos _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 11 stage stage NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 911 # text = A switch from human fetal (gamma)-to adult (beta)-globin expression occurs within erythroid precursor cells of the adult lineage. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 switch switch NOUN NN Number=Sing _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 fetal fetal NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 to to ADP IN _ _ _ _ _ 11 adult adult NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 - - PUNCT : _ _ _ _ SpaceAfter=No 16 globin globin ADJ JJ Degree=Pos _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 occurs occur NOUN NNS Number=Plur _ _ _ _ 19 within within ADP IN _ _ _ _ _ 20 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 21 precursor precursor ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 adult adult ADJ JJ Degree=Pos _ _ _ _ 26 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 912 # text = Previously we and others showed by targeted gene disruption that the zinc finger gene, erythroid Kruppel-like factor (EKLF), is required for expression of the beta-globin gene in mice, presumably through interaction with a high-affinity binding site in the proximal promoter. 1 Previously previously ADV RB _ _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 others other NOUN NNS Number=Plur _ _ _ _ 5 showed show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 targeted target VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 disruption disruption NOUN NN Number=Sing _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 zinc zinc NOUN NN Number=Sing _ _ _ _ 13 finger finger NOUN NN Number=Sing _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 erythroid erythroid PROPN NNP Number=Sing _ _ _ _ 17 Kruppel Kruppel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 like like ADJ JJ Degree=Pos _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 EKLF EKLF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 globin globin NOUN NN Number=Sing _ _ _ _ 34 gene gene NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 presumably presumably ADV RB _ _ _ _ _ 39 through through ADP IN _ _ _ _ _ 40 interaction interaction NOUN NN Number=Sing _ _ _ _ 41 with with ADP IN _ _ _ _ _ 42 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 affinity affinity NOUN NN Number=Sing _ _ _ _ 46 binding binding VERB VBG VerbForm=Ger _ _ _ _ 47 site site NOUN NN Number=Sing _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 51 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 913 # text = To examine the role of EKLF in the developmental regulation of the human gamma-globin gene we interbred EKLF heterozygotes (+/-) with mice harboring a human beta-globin yeast artificial chromosome transgene. 1 To to PART TO _ _ _ _ _ 2 examine examine VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 EKLF EKLF PROPN NNP Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 10 regulation regulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 globin globin NOUN NN Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 19 interbred interbr VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 EKLF EKLF PROPN NNP Number=Sing _ _ _ _ 21 heterozygotes heterozygote NOUN NNS Number=Plur _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 +/-) +/-) SYM NFP _ _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 mice mouse NOUN NNS Number=Plur _ _ _ _ 26 harboring harbor VERB VBG VerbForm=Ger _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 globin globin NOUN NN Number=Sing _ _ _ _ 32 yeast yeast NOUN NN Number=Sing _ _ _ _ 33 artificial artificial ADJ JJ Degree=Pos _ _ _ _ 34 chromosome chromosome ADJ JJ Degree=Pos _ _ _ _ 35 transgene transgene NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 914 # text = We find that in the absence of EKLF, while human beta-globin expression is dramatically reduced, gamma-globin transcripts are elevated approximately 5-fold. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 find find VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 absence absence NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 EKLF EKLF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 while while SCONJ IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 globin globin NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 dramatically dramatically ADV RB _ _ _ _ _ 18 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 globin globin NOUN NN Number=Sing _ _ _ _ 23 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 24 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 elevated elevate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 approximately approximately ADV RB _ _ _ _ _ 27 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 915 # text = Impaired silencing of gamma-globin expression identifies EKLF as the first transcription factor participating quantitatively in the gamma-globin to beta-globin switch. 1 Impaired Impaired VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 silencing silencing NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 globin globin NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 identifies identify VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 EKLF EKLF PROPN NNP Number=Sing _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 participating participate VERB VBG VerbForm=Ger _ _ _ _ 16 quantitatively quantitatively ADV RB _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 globin globin NOUN NN Number=Sing _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 globin globin ADJ JJ Degree=Pos _ _ _ _ 26 switch switch NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 916 # text = Our findings are compatible with a competitive model of switching in which EKLF mediates an adult stage-specific interaction between the beta-globin gene promoter and the locus control region that excludes the gamma-globin gene. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 compatible compatible ADJ JJ Degree=Pos _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 competitive competitive ADJ JJ Degree=Pos _ _ _ _ 8 model model NOUN NN Number=Sing _ _ _ _ 9 of of SCONJ IN _ _ _ _ _ 10 switching switch VERB VBG VerbForm=Ger _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 EKLF EKLF PROPN NNP Number=Sing _ _ _ _ 14 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 adult adult ADJ JJ Degree=Pos _ _ _ _ 17 stage stage NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 interaction interaction NOUN NN Number=Sing _ _ _ _ 21 between between ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 globin globin NOUN NN Number=Sing _ _ _ _ 26 gene gene NOUN NN Number=Sing _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 locus locus ADJ JJ Degree=Pos _ _ _ _ 31 control control NOUN NN Number=Sing _ _ _ _ 32 region region NOUN NN Number=Sing _ _ _ _ 33 that that PRON WDT PronType=Rel _ _ _ _ 34 excludes exclude VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 globin globin NOUN NN Number=Sing _ _ _ _ 39 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 917 # text = Document 003002336 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002336 003002336 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 918 # text = Membrane-associated lymphotoxin on natural killer cells activates endothelial cells via an NF-kappaB-dependent pathway. 1 Membrane membrane PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 lymphotoxin lymphotoxin NOUN NN Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 natural natural ADJ JJ Degree=Pos _ _ _ _ 7 killer killer NOUN NN Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 via via ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 -kappaB -kappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 18 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 919 # text = BACKGROUND: 1 BACKGROUND background NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 920 # text = Inhibition of complement in small animal models of xenotransplantation has demonstrated graft infiltration with natural killer (NK) cells and monocytes associated with endothelial cell (EC) activation. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 complement complement NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 small small ADJ JJ Degree=Pos _ _ _ _ 6 animal animal NOUN NN Number=Sing _ _ _ _ 7 models model NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 xenotransplantation xenotransplantation NOUN NN Number=Sing _ _ _ _ 10 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 graft graft NOUN NN Number=Sing _ _ _ _ 13 infiltration infiltration NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 natural natural ADJ JJ Degree=Pos _ _ _ _ 16 killer killer NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 NK NK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 23 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 921 # text = We have previously demonstrated that human NK cells activate porcine EC in vitro, which results in adhesion molecule expression and cytokine secretion. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 NK Nk PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 activate activate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 porcine porcine PRON PRP _ _ _ _ _ 11 EC EC PROPN NNP Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 vitro vitro PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which DET WDT PronType=Int _ _ _ _ 16 results result NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 19 molecule molecule NOUN NN Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 23 secretion secretion NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 922 # text = In this study, we used the NK cell line NK92 to define the molecular and cellular basis of NK cell-mediated EC activation. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 NK NK PROPN NNP Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 line line NOUN NN Number=Sing _ _ _ _ 11 NK92 Nk92 NOUN NN Number=Sing _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 define define VERB VB VerbForm=Inf _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 18 basis basis NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 NK NK PROPN NNP Number=Sing _ _ _ _ 21 cell cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 EC Ec PROPN NNP Number=Sing _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 923 # text = METHODS: EC were transfected with either reporter constructs containing the luciferase gene driven either by E-selectin or interleukin (IL)-8 promoters or a synthetic NF-kappaB-dependent promoter. 1 METHODS method NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 EC Ec PROPN NNP Number=Sing _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 transfected transfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 either either DET DT _ _ _ _ _ 8 reporter reporter NOUN NN Number=Sing _ _ _ _ 9 constructs construct NOUN NNS Number=Plur _ _ _ _ 10 containing contain VERB VBG VerbForm=Ger _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 either either CCONJ CC _ _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 selectin selectin NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 - - SYM SYM _ _ _ _ SpaceAfter=No 25 8 8 NUM CD NumType=Card _ _ _ _ 26 promoters promoter NOUN NNS Number=Plur _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 30 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 35 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 924 # text = In addition, a dominant-negative mutant tumor necrosis factor receptor 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 dominant dominant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 negative negative ADJ JJ Degree=Pos _ _ _ _ 8 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 9 tumor tumor NOUN NN Number=Sing _ _ _ _ 10 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ # sent_id = 925 # text = I (TNFRI) expression vector was co-transfected in inhibition studies. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 TNFRI TNFRI X AFX _ _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 vector vector NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 co-transfected co-transfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 11 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 926 # text = Forty-eight hours after transfection, EC were stimulated with NK cells or NK cell membrane extracts for 7 hr and activation was measured by a luciferase assay. 1 Forty Forty INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 eight eight NUM CD NumType=Card _ _ _ _ 4 hours hour NOUN NNS Number=Plur _ _ _ _ 5 after after ADP IN _ _ _ _ _ 6 transfection transfection NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 EC EC PROPN NNP Number=Sing _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 NK NK PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 NK NK PROPN NNP Number=Sing _ _ _ _ 16 cell cell VERB VB VerbForm=Inf _ _ _ _ 17 membrane membrane NOUN NN Number=Sing _ _ _ _ 18 extracts extract NOUN NNS Number=Plur _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 7 7 NUM CD NumType=Card _ _ _ _ 21 hr hr NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 measured measure VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 29 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 927 # text = RESULTS: Co-culture of NK cells with transfected EC enhanced E-selectin, IL-8, and NF-kappaB-dependent promoter activity. 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Co-culture Co-culture NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NK NK PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 EC Ec PROPN NNP Number=Sing _ _ _ _ 10 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 E-selectin E-selectin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 928 # text = NK cell membrane extracts retained the capacity to activate EC and induced nuclear translocation of NF-kappaB (p50 and p65). 1 NK NK PROPN NNP Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 membrane membrane NOUN NN Number=Sing _ _ _ _ 4 extracts extract NOUN NNS Number=Plur _ _ _ _ 5 retained retain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 capacity capacity NOUN NN Number=Sing _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 activate activate VERB VB VerbForm=Inf _ _ _ _ 10 EC EC PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 translocation translocation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 p50 p50 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 929 # text = Western blotting of NK cell and membrane extracts detected the presence of Lymphotoxin-alpha (LTalpha) but not tumor necrosis factor-alpha. 1 Western western ADJ JJ Degree=Pos _ _ _ _ 2 blotting blotting NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NK NK PROPN NNP Number=Sing _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 membrane membrane NOUN NN Number=Sing _ _ _ _ 8 extracts extract NOUN NNS Number=Plur _ _ _ _ 9 detected detect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 presence presence NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Lymphotoxin Lymphotoxin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 alpha alpha PROPN NNP Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 LTalpha LTalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 not not ADV RB _ _ _ _ _ 21 tumor tumor ADP IN _ _ _ _ _ 22 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 -alpha -alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 930 # text = Furthermore, LTalpha was secreted in NK:EC co-cultures. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 LTalpha LTalpha PROPN NNP Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 secreted secret VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 NK:EC Nk:ec PROPN NNP Number=Sing _ _ _ _ 8 co-cultures co-culture NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 931 # text = Co-transfection with dominant-negative mutant TNFRI inhibited EC activation by NK cell membrane extracts and by NK cells by 80% and 47%, respectively. 1 Co-transfection Co-transfection NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 dominant dominant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 negative negative ADJ JJ Degree=Pos _ _ _ _ 6 mutant mutant NOUN NN Number=Sing _ _ _ _ 7 TNFRI Tnfri PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 8 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 EC Ec PROPN NNP Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 NK NK PROPN NNP Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 membrane membrane NOUN NN Number=Sing _ _ _ _ 15 extracts extract NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 NK NK PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 80 80 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 % % SYM NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 47 47 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 932 # text = The same pattern of inhibition was observed using anti-human LT sera. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 same same ADJ JJ Degree=Pos _ _ _ _ 3 pattern pattern NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 using use VERB VBG VerbForm=Ger _ _ _ _ 9 anti-human anti-human ADJ JJ Degree=Pos _ _ _ _ 10 LT Lt NOUN NN Number=Sing _ _ _ _ 11 sera sera NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 933 # text = CONCLUSIONS: Human NK cell membrane-bound LT signals across species via TNFRI, leading to NF-kappaB nuclear translocation and transcription of E-selectin and IL-8, which results in EC activation. 1 CONCLUSIONS conclusion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Human human ADJ JJ Degree=Pos _ _ _ _ 4 NK NK PROPN NNP Number=Sing _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 membrane membrane NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 bound bound ADJ JJ Degree=Pos _ _ _ _ 9 LT Lt NOUN NN Number=Sing _ _ _ _ 10 signals signal NOUN NNS Number=Plur _ _ _ _ 11 across across ADP IN _ _ _ _ _ 12 species species NOUN NNS Number=Plur _ _ _ _ 13 via via ADP IN _ _ _ _ _ 14 TNFRI TNFRI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 leading lead VERB VBG VerbForm=Ger _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 22 translocation translocation NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 selectin selectin NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 which which DET WDT PronType=Int _ _ _ _ 34 results result NOUN NNS Number=Plur _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 EC EC PROPN NNP Number=Sing _ _ _ _ 37 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 934 # text = The discrepancy in the degree of inhibition by membrane extracts and NK cells with mutant TNFRI suggests that additional pathways are utilized by NK cells to activate EC. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 discrepancy discrepancy NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 degree degree NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 membrane membrane ADJ JJ Degree=Pos _ _ _ _ 10 extracts extract NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 NK NK PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 16 TNFRI TNFRI PROPN NNP Number=Sing _ _ _ _ 17 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 additional additional ADJ JJ Degree=Pos _ _ _ _ 20 pathways pathway NOUN NNS Number=Plur _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 utilized utilize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 NK NK PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 activate activate VERB VB VerbForm=Inf _ _ _ _ 28 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 935 # text = Document 003002346 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002346 003002346 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 936 # text = NF-kappaB only partially mediates Epstein-Barr virus latent membrane protein 1 activation of B cells. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 only only ADV RB _ _ _ _ _ 5 partially partially ADV RB _ _ _ _ _ 6 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Barr Barr PROPN NNP Number=Sing _ _ _ _ 10 virus virus NOUN NN Number=Sing _ _ _ _ 11 latent latent ADJ JJ Degree=Pos _ _ _ _ 12 membrane membrane NOUN NN Number=Sing _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 1 1 NUM CD NumType=Card _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 B b ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 937 # text = The latent membrane protein 1 (LMP1) of Epstein-Barr virus (EBV) is required for EBV-induced immortalization of human B cells and causes tumorigenic transformation of cell lines. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 latent latent ADJ JJ Degree=Pos _ _ _ _ 3 membrane membrane NOUN NN Number=Sing _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 1 1 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 LMP1 LMP1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 Barr Barr PROPN NNP Number=Sing _ _ _ _ 13 virus virus NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 immortalization immortalization NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 B b ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 causes cause NOUN NNS Number=Plur _ _ _ _ 30 tumorigenic tumorigenic ADJ JJ Degree=Pos _ _ _ _ 31 transformation transformation NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 cell cell NOUN NN Number=Sing _ _ _ _ 34 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 938 # text = LMP1 expression induces phenotypic changes resembling B cell activation, such as cell size increase and up-regulation of cell surface activation markers. 1 LMP1 LMP1 NUM CD NumType=Card _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 induces induce NOUN NNS Number=Plur _ _ _ _ 4 phenotypic phenotypic ADJ JJ Degree=Pos _ _ _ _ 5 changes change NOUN NNS Number=Plur _ _ _ _ 6 resembling resembl VERB VBG VerbForm=Ger _ _ _ _ 7 B b ADJ JJ Degree=Pos _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 such such ADJ JJ Degree=Pos _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 size size NOUN NN Number=Sing _ _ _ _ 15 increase increase NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 regulation regulation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 surface surface NOUN NN Number=Sing _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 markers marker NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 939 # text = LMP1 contains two domains that activate the transcription factor NF-kappaB, one through interactions with TRAF proteins and the other with the TRADD protein. 1 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ _ 2 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 two two NUM CD NumType=Card _ _ _ _ 4 domains domain NOUN NNS Number=Plur _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 activate activate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 one one NUM CD NumType=Card _ _ _ _ 15 through through ADP IN _ _ _ _ _ 16 interactions interaction NOUN NNS Number=Plur _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 TRAF TRAF NOUN NN Number=Sing _ _ _ _ 19 proteins protein NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 other other ADJ JJ Degree=Pos _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 TRADD tRADd NOUN NN Number=Sing _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 940 # text = The purpose of the present study was to investigate the importance of NF-kappaB induction in the up-regulation of the B cell activation markers ICAM-1 and CD71 by LMP1. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 purpose purpose NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 present present ADJ JJ Degree=Pos _ _ _ _ 6 study study NOUN NN Number=Sing _ _ _ _ 7 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 importance importance NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 regulation regulation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 B b ADJ JJ Degree=Pos _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 markers marker NOUN NNS Number=Plur _ _ _ _ 28 ICAM ICAm NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - SYM SYM _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 CD71 CD71 PROPN NNP Number=Sing _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 941 # text = This study shows that expression of LMP1 activates transcription from p50/p65- and c-Rel- responsive promoters, and that this activity can be completely inhibited by expression of a dominant inhibitory IkappaB mutant. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 shows show VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 LMP1 LMP1 NUM CD NumType=Card _ _ _ _ 8 activates activate NOUN NNS Number=Plur _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 p50/p65- p50/p65- PUNCT : _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ _ 17 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 18 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 can can AUX MD VerbForm=Fin _ _ _ _ 25 be be AUX VB VerbForm=Inf _ _ _ _ 26 completely completely ADV RB _ _ _ _ _ 27 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 33 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 34 IkappaB Ikappab NOUN NN Number=Sing _ _ _ _ 35 mutant mutant NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 942 # text = ICAM-1 and CD71 are nevertheless up-regulated by LMP1 in primary B cells and cell lines expressing the dominant IkappaB. 1 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 CD71 Cd71 PROPN NNP Number=Sing _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 nevertheless nevertheless ADV RB _ _ _ _ _ 8 up up ADV RB _ _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 LMP1 Lmp1 PROPN NNP Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 primary primary ADJ JJ Degree=Pos _ _ _ _ 15 B b ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 lines line NOUN NNS Number=Plur _ _ _ _ 20 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 23 IkappaB Ikappab PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 943 # text = Furthermore, LMP1-induced cell size increase of primary B cells was unaffected by IkappaB expression. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 LMP1 LMP1 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 size size NOUN NN Number=Sing _ _ _ _ 8 increase increase NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 primary primary ADJ JJ Degree=Pos _ _ _ _ 11 B b ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 unaffected unaffected ADJ JJ Degree=Pos _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 IkappaB Ikappab PROPN NNP Number=Sing _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 944 # text = It was concluded that even when LMP1 is unable to activate NF-kappaB, it is still capable of inducing certain characteristics of activated B cells, strongly suggesting that LMP1 can also activate cells independently of NF-kappaB. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 concluded conclude VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 even even ADV RB _ _ _ _ _ 6 when when ADV WRB PronType=Int _ _ _ _ 7 LMP1 LMP1 NUM CD NumType=Card _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 unable unable ADJ JJ Degree=Pos _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 activate activate VERB VB VerbForm=Inf _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 still still ADV RB _ _ _ _ _ 19 capable capable ADJ JJ Degree=Pos _ _ _ _ 20 of of SCONJ IN _ _ _ _ _ 21 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 22 certain certain ADJ JJ Degree=Pos _ _ _ _ 23 characteristics characteristic NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 strongly strongly ADV RB _ _ _ _ _ 30 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 31 that that SCONJ IN _ _ _ _ _ 32 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ _ 33 can can AUX MD VerbForm=Fin _ _ _ _ 34 also also ADV RB _ _ _ _ _ 35 activate activate VERB VB VerbForm=Inf _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ _ 37 independently independently ADV RB _ _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 kappaB. kappaB. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 945 # text = Document 003002347 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002347 003002347 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 946 # text = Potent gene regulatory and antiproliferative activities of 20-methyl analogues of 1,25 dihydroxyvitamin D3. 1 Potent potent ADJ JJ Degree=Pos _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 antiproliferative antiproliferative ADJ JJ Degree=Pos _ _ _ _ 6 activities activity NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 methyl methyl NOUN NN Number=Sing _ _ _ _ 11 analogues analogue NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 1,25 1,25 NUM CD NumType=Card _ _ _ _ 14 dihydroxyvitamin dihydroxyvitamin NOUN NN Number=Sing _ _ _ _ 15 D3 D3 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 947 # text = The biological active form of vitamin D3, 1,25-dihydroxyvitamin D3 (VD), regulates cellular growth and differentiation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 biological biological ADJ JJ Degree=Pos _ _ _ _ 3 active active ADJ JJ Degree=Pos _ _ _ _ 4 form form NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 vitamin vitamin ADJ JJ Degree=Pos _ _ _ _ 7 D3 D3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 dihydroxyvitamin dihydroxyvitamin NOUN NN Number=Sing _ _ _ _ 12 D3 D3 NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 VD VD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 19 growth growth NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 948 # text = This provides the hormone with an interesting therapeutic potential. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 hormone hormone NOUN NN Number=Sing _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 interesting interesting ADJ JJ Degree=Pos _ _ _ _ 8 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 9 potential potential NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 949 # text = However, hypercalcemia is a side effect, which is caused by VD's classical action, the regulation of calcium homeostasis. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 hypercalcemia hypercalcemia NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 side side NOUN NN Number=Sing _ _ _ _ 7 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 which which PRON WDT PronType=Rel _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 caused cause VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 VD VD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 's 's PART POS _ _ _ _ _ 15 classical classical ADJ JJ Degree=Pos _ _ _ _ 16 action action NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 regulation regulation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 calcium calcium NOUN NN Number=Sing _ _ _ _ 22 homeostasis homeostasis NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 950 # text = This made the need for VD analogues with selectively increased cell regulatory properties. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 made make VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 need need NOUN NN Number=Sing _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 VD Vd ADJ JJ Degree=Pos _ _ _ _ 7 analogues analogue NOUN NNS Number=Plur _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 selectively selectively ADV RB _ _ _ _ _ 10 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 13 properties property NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 951 # text = Studies with 20-epi analogues pointed out the importance of the carbon-20 position and led to the development of 20-methyl derivatives of VD. 1 Studies study NOUN NNS Number=Plur _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 epi epi NOUN NN Number=Sing _ _ _ _ 6 analogues analogue NOUN NNS Number=Plur _ _ _ _ 7 pointed point VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 out out ADP RP _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 importance importance NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 carbon carbon NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 20 20 NUM CD NumType=Card _ _ _ _ 16 position position NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 development development NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 methyl methyl NOUN NN Number=Sing _ _ _ _ 26 derivatives derivative NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 VD VD NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 952 # text = In this report the biological properties of the compounds ZK161422 and ZK157202, which are 20-methyl- and 20-methyl-23-eneanalogues, respectively, have been analyzed in comparison with VD. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 biological biological ADJ JJ Degree=Pos _ _ _ _ 6 properties property NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 compounds compound NOUN NNS Number=Plur _ _ _ _ 10 ZK161422 Zk161422 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 ZK157202 Zk157202 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 methyl methyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 20-methyl 20-methyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 23 23 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 -eneanalogues -eneanalogue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 30 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 comparison comparison NOUN NN Number=Sing _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 VD VD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 953 # text = Both compounds show about 2-fold lower affinity to the VD receptor (VDR) than VD. 1 Both both DET DT _ _ _ _ _ 2 compounds compound NOUN NNS Number=Plur _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 about about ADP IN _ _ _ _ _ 5 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 fold fold VERB VB VerbForm=Inf _ _ _ _ 8 lower lower ADJ JJR Degree=Cmp _ _ _ _ 9 affinity affinity NOUN NN Number=Sing _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 VD V PROPN NNP Number=Sing _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 VDR VDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 than than ADP IN _ _ _ _ _ 18 VD VD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 954 # text = However, compared to VD, their antiproliferative effect is up to 30-fold higher on human peripheral blood mononuclear cells and even up to 300-fold higher on human breast cancer MCF-7 cells. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 VD VD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 8 antiproliferative antiproliferative ADJ JJ Degree=Pos _ _ _ _ 9 effect effect NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 up up ADV RB _ _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 30 30 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 fold fold NOUN NN Number=Sing _ _ _ _ 16 higher higher ADV RBR Degree=Cmp _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 20 blood blood NOUN NN Number=Sing _ _ _ _ 21 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 even even ADV RB _ _ _ _ _ 25 up up ADP IN _ _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 300 300 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 fold fold NOUN NN Number=Sing _ _ _ _ 30 higher higher ADV RBR Degree=Cmp _ _ _ _ 31 on on ADP IN _ _ _ _ _ 32 human human ADJ JJ Degree=Pos _ _ _ _ 33 breast breast NOUN NN Number=Sing _ _ _ _ 34 cancer cancer NOUN NN Number=Sing _ _ _ _ 35 MCF Mcf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT , _ _ _ _ SpaceAfter=No 37 7 7 NUM CD NumType=Card _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 955 # text = Whereas the hypercalcemic effect for ZK157202 is also increased 10-fold, ZK161422 has the same calcium-mobilizing potency as VD. 1 Whereas whereas SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 hypercalcemic hypercalcemic ADJ JJ Degree=Pos _ _ _ _ 4 effect effect NOUN NN Number=Sing _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 ZK157202 ZK157202 NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 also also ADV RB _ _ _ _ _ 9 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 ZK ZK NUM CD NumType=Card _ _ _ SpaceAfter=No 15 161422 161422 NUM CD NumType=Card _ _ _ _ 16 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 same same ADJ JJ Degree=Pos _ _ _ _ 19 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 mobilizing mobilizing NOUN NN Number=Sing _ _ _ _ 22 potency potency NOUN NN Number=Sing _ _ _ _ 23 as as ADP IN _ _ _ _ _ 24 VD VD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 956 # text = Moreover, ZK161422, but not ZK157202, showed preference for gene activation from a promoter carrying a VD response element with a palindromic arrangement of two hexameric receptor binding sites spaced by 9 nucleotides (IP9) rather than for activation from a response element formed by a direct repeat spaced by 3 nucleotides (DR3). 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 ZK ZK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 161422 161422 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 but but CCONJ CC _ _ _ _ _ 7 not not ADV RB _ _ _ _ _ 8 ZK157202 ZK157202 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 preference preference NOUN NN Number=Sing _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 VD Vd PROPN NNP Number=Sing _ _ _ _ 21 response response NOUN NN Number=Sing _ _ _ _ 22 element element NOUN NN Number=Sing _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 palindromic palindromic ADJ JJ Degree=Pos _ _ _ _ 26 arrangement arrangement NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 two two NUM CD NumType=Card _ _ _ _ 29 hexameric hexameric ADJ JJ Degree=Pos _ _ _ _ 30 receptor receptor NOUN NN Number=Sing _ _ _ _ 31 binding bind VERB VBG VerbForm=Ger _ _ _ _ 32 sites site NOUN NNS Number=Plur _ _ _ _ 33 spaced space VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 9 9 NUM CD NumType=Card _ _ _ _ 36 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 IP9 IP9 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 rather rather ADV RB _ _ _ _ _ 41 than than ADP IN _ _ _ _ _ 42 for for ADP IN _ _ _ _ _ 43 activation activation NOUN NN Number=Sing _ _ _ _ 44 from from ADP IN _ _ _ _ _ 45 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 46 response response NOUN NN Number=Sing _ _ _ _ 47 element element NOUN NN Number=Sing _ _ _ _ 48 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 49 by by ADP IN _ _ _ _ _ 50 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 51 direct direct ADJ JJ Degree=Pos _ _ _ _ 52 repeat repeat NOUN NN Number=Sing _ _ _ _ 53 spaced space VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 54 by by ADP IN _ _ _ _ _ 55 3 3 NUM CD NumType=Card _ _ _ _ 56 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 57 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 58 DR3 DR3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 957 # text = This observation supports a model, in which promoter selectivity reflects the selectively increased antiproliferative effect of VD analogues. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 observation observation NOUN NN Number=Sing _ _ _ _ 3 supports support VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 model model NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 promoter promoter ADJ JJR Degree=Cmp _ _ _ _ 10 selectivity selectivity NOUN NN Number=Sing _ _ _ _ 11 reflects reflect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 selectively selectively ADV RB _ _ _ _ _ 14 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 antiproliferative antiproliferative ADJ JJ Degree=Pos _ _ _ _ 16 effect effect NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 VD Vd ADJ JJ Degree=Pos _ _ _ _ 19 analogues analogue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 958 # text = Document 003002355 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002355 003002355 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 959 # text = Cell-specific bifunctional role of Jun oncogene family members on glucocorticoid receptor-dependent transcription. 1 Cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 specific specific ADJ JJ Degree=Pos _ _ _ _ 4 bifunctional bifunctional ADJ JJ Degree=Pos _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Jun Jun PROPN NNP Number=Sing _ _ _ _ 8 oncogene oncogene ADJ JJ Degree=Pos _ _ _ _ 9 family family NOUN NN Number=Sing _ _ _ _ 10 members member NOUN NNS Number=Plur _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 960 # text = Interaction between protein kinase C (PKC)- and glucocorticoid receptor (GR)-mediated signaling is suggested by the ability of the PKC activating phorbol ester 12-O-tetradecanoylphorbol-13-acetate (TPA) to inhibit GR-dependent transcription of the mouse mammary tumor virus (MMTV) long terminal repeat (LTR). 1 Interaction interaction NOUN NN Number=Sing _ _ _ _ 2 between between ADP IN _ _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 kinase kinase NOUN NN Number=Sing _ _ _ _ 5 C C PROPN NNP Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 - - PUNCT : _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 GR GR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 - - PUNCT : _ _ _ _ SpaceAfter=No 17 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 signaling signaling NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 suggested suggest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 ability ability NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 PKC Pkc NOUN NN Number=Sing _ _ _ _ 27 activating activat VERB VBG VerbForm=Ger _ _ _ _ 28 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 29 ester ester NOUN NN Number=Sing _ _ _ _ 30 12-O-tetradecanoylphorbol 12-O-tetradecanoylphorbol NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 -acetate -acetate NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 to to PART TO _ _ _ _ _ 37 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 38 GR Gr ADV RB _ _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 41 transcription transcription NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 mouse mouse NOUN NN Number=Sing _ _ _ _ 45 mammary mammary NOUN NN Number=Sing _ _ _ _ 46 tumor tumor NOUN NN Number=Sing _ _ _ _ 47 virus virus NOUN NN Number=Sing _ _ _ _ 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 MMTV MMTV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ _ 51 long long ADJ JJ Degree=Pos _ _ _ _ 52 terminal terminal NOUN NN Number=Sing _ _ _ _ 53 repeat repeat NOUN NN Number=Sing _ _ _ _ 54 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 55 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 56 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 961 # text = Here we report that this interference is cell specific, as TPA augmented dexamethasone-induced transcriptional activation of the MMTV LTR in several T cell lines but was inhibitory in NIH-3T3 fibroblasts. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 interference interference NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 as as SCONJ IN _ _ _ _ _ 12 TPA TPA PROPN NNP Number=Sing _ _ _ _ 13 augmented augment VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 MMTV MMTV PROPN NNP Number=Sing _ _ _ _ 22 LTR LTR PROPN NNP Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 several several ADJ JJ Degree=Pos _ _ _ _ 25 T T PROPN NNP Number=Sing _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 lines line NOUN NNS Number=Plur _ _ _ _ 28 but but CCONJ CC _ _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 NIH NIH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 3T3 3T3 NUM CD NumType=Card _ _ _ _ 35 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 962 # text = TPA-GR synergism was determined to have occurred at the GR-responsive element (GRE) level by functional analysis of deletion mutants or synthetic GRE oligonucleotides driving chloramphenicol acetyl-transferase expression. 1 TPA TPa NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 GR Gr NOUN NN Number=Sing _ _ _ _ 4 synergism synergism NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 determined determined ADJ JJ Degree=Pos _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 have have AUX VB VerbForm=Inf _ _ _ _ 9 occurred occur VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 at at ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 GR GR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 15 element element NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 GRE GRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 level level NOUN NN Number=Sing _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 functional functional ADJ JJ Degree=Pos _ _ _ _ 22 analysis analysis NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 deletion deletion NOUN NN Number=Sing _ _ _ _ 25 mutants mutant NOUN NNS Number=Plur _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 28 GRE Gre NOUN NN Number=Sing _ _ _ _ 29 oligonucleotides oligonucleotide SCONJ IN _ _ _ _ _ 30 driving drive VERB VBG VerbForm=Ger _ _ _ _ 31 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 32 acetyl acetyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 transferase transferase NOUN NN Number=Sing _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 963 # text = Synergism required an intact GR DNA-binding domain, whereas amino- or carboxyl-terminal domains were dispensable. 1 Synergism Synergism PROPN NNP Number=Sing _ _ _ _ 2 required require VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 intact intact ADJ JJ Degree=Pos _ _ _ _ 5 GR Gr NOUN NN Number=Sing _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 whereas whereas SCONJ IN _ _ _ _ _ 12 amino amino NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 carboxyl carboxyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 18 domains domain NOUN NNS Number=Plur _ _ _ _ 19 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 dispensable dispensable ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 964 # text = The effect was abrogated by the PKC inhibitor staurosporine, suggesting a role for PKC. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 abrogated abrogate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 PKC PKC NOUN NN Number=Sing _ _ _ _ 8 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 9 staurosporine staurosporine NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 role role NOUN NN Number=Sing _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 965 # text = Increased c-jun, jun-B, and jun-D expression above basal levels and increased transcriptional activity of AP-1/TPA responsive elements fused to chloramphenicol acetyl-transferase vectors were observed in T cells treated with TPA alone or in combination with dexamethasone. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 c- c- SYM NFP _ _ _ _ SpaceAfter=No 3 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 -B -b NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 jun jun ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 -D -d ADJ JJ Degree=Pos _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 above above ADP IN _ _ _ _ _ 13 basal basal ADJ JJ Degree=Pos _ _ _ _ 14 levels level NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 24 TPA TPa NOUN NN Number=Sing _ _ _ _ 25 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 26 elements element NOUN NNS Number=Plur _ _ _ _ 27 fused fuse VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 to to PART TO _ _ _ _ _ 29 chloramphenicol chloramphenicol VERB VB VerbForm=Inf _ _ _ _ 30 acetyl acetyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 transferase transferase NOUN NN Number=Sing _ _ _ _ 33 vectors vector NOUN NNS Number=Plur _ _ _ _ 34 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 T t PROPN NNP Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ _ 39 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 with with ADP IN _ _ _ _ _ 41 TPA TPA PROPN NNP Number=Sing _ _ _ _ 42 alone alone ADV RB _ _ _ _ _ 43 or or CCONJ CC _ _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 combination combination NOUN NN Number=Sing _ _ _ _ 46 with with ADP IN _ _ _ _ _ 47 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 966 # text = The ability of Jun proteins to cooperate with GR in T cells has been investigated after transfection of c-jun, jun-B, or jun-D expression vectors, which augmented GR-dependent transcription from either MMTV LTR or GRE. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ability ability NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Jun Jun PROPN NNP Number=Sing _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 cooperate cooperate VERB VB VerbForm=Inf _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 GR GR PROPN NNP Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 T T PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 15 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 after after ADP IN _ _ _ _ _ 17 transfection transfection NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 c- c- SYM NFP _ _ _ _ SpaceAfter=No 20 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 -B -b NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 D d NOUN NN Number=Sing _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 vectors vector NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 which which PRON WDT PronType=Rel _ _ _ _ 33 augmented augment VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 GR GR ADV RB _ _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 37 transcription transcription NOUN NN Number=Sing _ _ _ _ 38 from from ADP IN _ _ _ _ _ 39 either either CCONJ CC _ _ _ _ _ 40 MMTV MMTV PROPN NNP Number=Sing _ _ _ _ 41 LTR LTR PROPN NNP Number=Sing _ _ _ _ 42 or or CCONJ CC _ _ _ _ _ 43 GRE GRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 967 # text = Conversely, c-jun and jun-B transfection blunted GR-dependent transcription in HeLa cells. 1 Conversely Conversely ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 c- c- SYM NFP _ _ _ _ SpaceAfter=No 4 jun jun ADJ JJ Degree=Pos _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 jun jun ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 -B -b ADJ JJ Degree=Pos _ _ _ _ 8 transfection transfection NOUN NN Number=Sing _ _ _ _ 9 blunted blunt VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 GR GR ADV RB _ _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 968 # text = The presence of c-fos had a negative influence on GR function and correlated with the cell-specific synergistic or antagonistic activity of Jun with respect to GR; high basal expression of c-fos as well as AP-1 DNA binding and transcriptional activity were observed in HeLa cells, but not in T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 presence presence NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 fos fo NOUN NNS Number=Plur _ _ _ _ 7 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 negative negative ADJ JJ Degree=Pos _ _ _ _ 10 influence influence NOUN NN Number=Sing _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 GR Gr NOUN NN Number=Sing _ _ _ _ 13 function function NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 specific specific ADJ JJ Degree=Pos _ _ _ _ 21 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 antagonistic antagonistic ADJ JJ Degree=Pos _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 Jun Jun PROPN NNP Number=Sing _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 respect respect NOUN NN Number=Sing _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 GR GR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ; ; PUNCT , _ _ _ _ _ 32 high high ADJ JJ Degree=Pos _ _ _ _ 33 basal basal NOUN NN Number=Sing _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 fos fo NOUN NNS Number=Plur _ _ _ _ 39 as as ADV RB _ _ _ _ _ 40 well well ADV RB Degree=Pos _ _ _ _ 41 as as ADP IN _ _ _ _ _ 42 AP Ap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 1 1 NUM CD NumType=Card _ _ _ _ 45 DNA dna NOUN NN Number=Sing _ _ _ _ 46 binding binding VERB VBG VerbForm=Ger _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 49 activity activity NOUN NN Number=Sing _ _ _ _ 50 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 51 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 52 in in ADP IN _ _ _ _ _ 53 HeLa Hela PROPN NNP Number=Sing _ _ _ _ 54 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 55 , , PUNCT , _ _ _ _ _ 56 but but CCONJ CC _ _ _ _ _ 57 not not ADV RB _ _ _ _ _ 58 in in ADP IN _ _ _ _ _ 59 T t PROPN NNP Number=Sing _ _ _ _ 60 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ _ # sent_id = 969 # text = Furthermore overexpression of exogenous c-fos has an inhibitory effect on GR-dependent transcription from GRE in T cells. 1 Furthermore furthermore ADJ JJ Degree=Pos _ _ _ _ 2 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 5 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 fos fos NOUN NN Number=Sing _ _ _ _ 8 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 11 effect effect NOUN NN Number=Sing _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 GR Gr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 GRE GRE PROPN NNP Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 970 # text = We propose that Jun plays a bifunctional role on GR-dependent transcriptional activation of GRE, selecting either synergistic or antagonistic activity depending on the cell-specific microenvironment. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 Jun Jun PROPN NNP Number=Sing _ _ _ _ 5 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 bifunctional bifunctional ADJ JJ Degree=Pos _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 GR GR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 13 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 GRE GRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 selecting selecte VERB VBG VerbForm=Ger _ _ _ _ 19 either either CCONJ CC _ _ _ _ _ 20 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 21 or or CCONJ CC _ _ _ _ _ 22 antagonistic antagonistic ADJ JJ Degree=Pos _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 depending depend VERB VBG VerbForm=Ger _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 29 microenvironment microenvironment NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 971 # text = In this regard, intracellular levels of c-fos appear to be influential. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 regard regard NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 intracellular intracelular ADJ JJ Degree=Pos _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT : _ _ _ _ SpaceAfter=No 10 fos fo NOUN NNS Number=Plur _ _ _ _ 11 appear appear VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 influential influential ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 972 # text = Document 003002357 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002357 003002357 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 973 # text = Cupric ion blocks NF kappa B activation through inhibiting the signal-induced phosphorylation of I kappa B alpha. 1 Cupric Cupric ADJ JJ Degree=Pos _ _ _ _ 2 ion ion NOUN NN Number=Sing _ _ _ _ 3 blocks block NOUN NNS Number=Plur _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ _ 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B B PROPN NNP Number=Sing _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 through through SCONJ IN _ _ _ _ _ 9 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B B PROPN NNP Number=Sing _ _ _ _ 19 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 974 # text = A transcription factor NF kappa B, which regulates expression of various cellular genes involved in immune responses and viral genes including HIV, is sequestered in the cytoplasm as a complex with an inhibitory protein I kappa B. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ _ 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 various various ADJ JJ Degree=Pos _ _ _ _ 13 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 14 genes gene NOUN NNS Number=Plur _ _ _ _ 15 involved involved ADJ JJ Degree=Pos _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 immune immune ADJ JJ Degree=Pos _ _ _ _ 18 responses respons NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 viral viral ADJ JJ Degree=Pos _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ _ 22 including include VERB VBG VerbForm=Ger _ _ _ _ 23 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 sequestered sequester VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 30 as as ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 complex complex NOUN NN Number=Sing _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 36 protein protein NOUN NN Number=Sing _ _ _ _ 37 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 38 kappa kappa PROPN NNP Number=Sing _ _ _ _ 39 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 975 # text = Various extracellular signals induce phosphorylation and rapid degradation of I kappa B alpha to release NF kappa B. Cu2+ was found to inhibit the activation of NF kappa B induced by TNF-alpha, TPA, or H2O2. 1 Various various ADJ JJ Degree=Pos _ _ _ _ 2 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 3 signals signal NOUN NNS Number=Plur _ _ _ _ 4 induce induce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 8 degradation degradation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 kappa kappa X FW Foreign=Yes _ _ _ _ 12 B b ADJ JJ Degree=Pos _ _ _ _ 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 release release VERB VB VerbForm=Inf _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ _ 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B. B. PROPN NNP Number=Sing _ _ _ _ 19 Cu2 cu2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 + + SYM SYM _ _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ _ 29 kappa kappa PROPN NNP Number=Sing _ _ _ _ 30 B b PROPN NNP Number=Sing _ _ _ _ 31 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 TPA Tpa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 or or CCONJ CC _ _ _ _ _ 40 H2 H2 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 O2 O2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 976 # text = Deoxycholate treatment of the cytoplasmic extract prepared from cells stimulated by TNF-alpha in the presence of Cu2+ resulted in the release of NF kappa B from I kappa B alpha, indicating that Cu2+ interferes with the dissociation of the NF kappa B-I kappa B complex. 1 Deoxycholate Deoxycholate ADJ JJ Degree=Pos _ _ _ _ 2 treatment treatment NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 6 extract extract NOUN NN Number=Sing _ _ _ _ 7 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 alpha alpha NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 presence presence NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 Cu2 Cu2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 + + SYM SYM _ _ _ _ _ 21 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 release release NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ _ 27 kappa kappa PROPN NNP Number=Sing _ _ _ _ 28 B B PROPN NNP Number=Sing _ _ _ _ 29 from from ADP IN _ _ _ _ _ 30 I I PROPN NNP Number=Sing _ _ _ _ 31 kappa kappa PROPN NNP Number=Sing _ _ _ _ 32 B B PROPN NNP Number=Sing _ _ _ _ 33 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 36 that that SCONJ IN _ _ _ _ _ 37 Cu2 cu2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 + + SYM SYM _ _ _ _ _ 39 interferes interfere VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 40 with with ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 dissociation dissociation NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 NF NF PROPN NNP Number=Sing _ _ _ _ 46 kappa kappa PROPN NNP Number=Sing _ _ _ _ 47 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT , _ _ _ _ SpaceAfter=No 49 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 50 kappa kappa X FW Foreign=Yes _ _ _ _ 51 B b ADJ JJ Degree=Pos _ _ _ _ 52 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 977 # text = Neither phosphorylation nor degradation of I kappa B alpha was observed upon TNF-alpha stimulation in the presence of Cu2+. 1 Neither neither DET DT _ _ _ _ _ 2 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 3 nor nor CCONJ CC _ _ _ _ _ 4 degradation degradation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B B PROPN NNP Number=Sing _ _ _ _ 9 alpha alpha PROPN NNP Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 upon upon ADP IN _ _ _ _ _ 13 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 alpha alpha NOUN NN Number=Sing _ _ _ _ 16 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 presence presence NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 Cu2 Cu2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 +. +. NOUN NN Number=Sing _ _ _ _ # sent_id = 978 # text = These results indicate that Cu2+ inhibits the release of NF kappa B by blockade of a signal leading to the phosphorylation of I kappa B alpha. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Cu2 Cu2 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 + + SYM SYM _ _ _ _ _ 7 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 release release NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ _ 12 kappa kappa PROPN NNP Number=Sing _ _ _ _ 13 B b PROPN NNP Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 blockade blockade NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 signal signal NOUN NN Number=Sing _ _ _ _ 19 leading lead VERB VBG VerbForm=Ger _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 25 kappa kappa PROPN NNP Number=Sing _ _ _ _ 26 B B PROPN NNP Number=Sing _ _ _ _ 27 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 979 # text = Document 003002358 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002358 003002358 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 980 # text = Vitamin D3- and retinoic acid-induced monocytic differentiation: interactions between the endogenous vitamin D3 receptor, retinoic acid receptors, and retinoid X receptors in U-937 cells. 1 Vitamin Vitamin PROPN NNP Number=Sing _ _ _ _ 2 D3 D3 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 6 acid acid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 10 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 : : PUNCT : _ _ _ _ _ 12 interactions interaction NOUN NNS Number=Plur _ _ _ _ 13 between between ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 16 vitamin vitamin NOUN NN Number=Sing _ _ _ _ 17 D3 D3 NOUN NN Number=Sing _ _ _ _ 18 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 21 acid acid ADJ JJ Degree=Pos _ _ _ _ 22 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 retinoid retinoid VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 X x ADP IN _ _ _ _ _ 27 receptors receptor NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 937 937 NUM CD NumType=Card _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 981 # text = Retinoic acid (RA) and 1,25 alpha-dihydroxycholecalciferol (VitD3) are potent regulators of hematopoletic differentiation. 1 Retinoic Retinoic ADJ JJ Degree=Pos _ _ _ _ 2 acid acid NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 1,25 1,25 NUM CD NumType=Card _ _ _ _ 8 alpha- alpha- PUNCT : _ _ _ _ SpaceAfter=No 9 dihydroxycholecalciferol dihydroxycholecalciferol NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 VitD3 VitD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 potent potent ADJ JJ Degree=Pos _ _ _ _ 15 regulators regulator NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 hematopoletic hematopoletic ADJ JJ Degree=Pos _ _ _ _ 18 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 982 # text = Yet, little is known as to how the RA and VitD3 receptor network operates in hematopoietic cells, and whether receptor interactions can explain the interplay between the RA- and VitD3-signaling pathways during differentiation. 1 Yet yet CCONJ CC _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 little little ADJ JJ Degree=Pos _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 as as ADP IN _ _ _ _ _ 7 to to SCONJ IN _ _ _ _ _ 8 how how ADV WRB PronType=Int _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 RA RA PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 VitD3 VitD3 NUM CD NumType=Card _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ _ 14 network network NOUN NN Number=Sing _ _ _ _ 15 operates operate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 whether whether SCONJ IN _ _ _ _ _ 22 receptor receptor NOUN NN Number=Sing _ _ _ _ 23 interactions interaction NOUN NNS Number=Plur _ _ _ _ 24 can can AUX MD VerbForm=Fin _ _ _ _ 25 explain explain VERB VB VerbForm=Inf _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 interplay interplay NOUN NN Number=Sing _ _ _ _ 28 between between ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 RA Ra NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 VitD3 VitD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 -signaling -signal ADJ JJ Degree=Pos _ _ _ _ 35 pathways pathway NOUN NNS Number=Plur _ _ _ _ 36 during during ADP IN _ _ _ _ _ 37 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 983 # text = Therefore, we analyzed the expression, DNA binding, and transcriptional activity of the endogenous RA and VitD3 receptors [retinoic acid receptors (RARs), retinoid X receptors (RXRs), and VitD3 receptor (VDR)] in the U-937 cell line, in which RA and VitD3 induce distinct monocytic differentiation pathways. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 DNA dna NOUN NN Number=Sing _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 17 RA Ra NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 VitD3 VitD3 NOUN NN Number=Sing _ _ _ _ 20 receptors receptor NOUN NNS Number=Plur _ _ _ _ 21 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 23 acid acid NOUN NN Number=Sing _ _ _ _ 24 receptors receptor NOUN NNS Number=Plur _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 RARs RAR NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 retinoid retinoid VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 30 X x SYM SYM _ _ _ _ _ 31 receptors receptor NOUN NNS Number=Plur _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 RXRs RXR NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 VitD3 VitD3 NUM CD NumType=Card _ _ _ _ 38 receptor receptor NOUN NN Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 VDR VDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 42 ] ] PUNCT -RRB- _ _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 U u PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 937 937 NUM CD NumType=Card _ _ _ _ 48 cell cell NOUN NN Number=Sing _ _ _ _ 49 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 , , PUNCT , _ _ _ _ _ 51 in in ADP IN _ _ _ _ _ 52 which which PRON WDT PronType=Rel _ _ _ _ 53 RA RA PROPN NNP Number=Sing _ _ _ _ 54 and and CCONJ CC _ _ _ _ _ 55 VitD3 VitD3 NUM CD NumType=Card _ _ _ _ 56 induce induce NOUN NN Number=Sing _ _ _ _ 57 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 58 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 59 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 60 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ _ # sent_id = 984 # text = VitD3 induction resulted in the formation of VDR/RXR DNA-binding complexes on both VitD3 response elements and RA response elements (RAREs). 1 VitD3 VitD3 NUM CD NumType=Card _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 formation formation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 VDR/RXR VDR/RXR PROPN NNP Number=Sing _ _ _ _ 9 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 complexes complex NOUN NNS Number=Plur _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 both both CCONJ CC _ _ _ _ _ 15 VitD3 VitD3 NUM CD NumType=Card _ _ _ _ 16 response response NOUN NN Number=Sing _ _ _ _ 17 elements element NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 RA RA PROPN NNP Number=Sing _ _ _ _ 20 response response NOUN NN Number=Sing _ _ _ _ 21 elements element NOUN NNS Number=Plur _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 RAREs RARE NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 985 # text = However, transcriptional activation was only observed from a VitD3 response element-driven reporter construct. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 only only ADV RB _ _ _ _ _ 7 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 VitD3 VitD3 NUM CD NumType=Card _ _ _ _ 11 response response NOUN NN Number=Sing _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 reporter reporter NOUN NN Number=Sing _ _ _ _ 16 construct construct NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 986 # text = Several DNA-binding complexes were detected on RAREs in undifferentiated cells. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 complexes complex NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 RAREs RARE NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 undifferentiated undifferentiated ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 987 # text = Stimulation by RA resulted in increased RAR beta/RXR DNA binding, activated RARE-dependent transcription, and increased expression of RAR-beta. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 by by ADP IN _ _ _ _ _ 3 RA RA PROPN NNP Number=Sing _ _ _ _ 4 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 RAR RAR PROPN NNP Number=Sing _ _ _ _ 8 beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 / / PUNCT , _ _ _ _ SpaceAfter=No 10 RXR RXR PROPN NNP Number=Sing _ _ _ _ 11 DNA Dna NOUN NN Number=Sing _ _ _ _ 12 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 activated activated VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 RARE rare PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 RAR RAR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 988 # text = Concomitant stimulation by VitD3 inhibited the RA-stimulated formation of RAR beta/RXR heterodimers, favoring VDR/RXR binding to the RARE. 1 Concomitant Concomitant ADJ JJ Degree=Pos _ _ _ _ 2 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 VitD3 VitD3 NUM CD NumType=Card _ _ _ _ 5 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 formation formation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 RAR RAR PROPN NNP Number=Sing _ _ _ _ 13 beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 RXR RXR PROPN NNP Number=Sing _ _ _ _ 16 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 favoring favor VERB VBG VerbForm=Ger _ _ _ _ 19 VDR VDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 RXR RXR PROPN NNP Number=Sing _ _ _ _ 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 RARE rare NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 989 # text = Also, VitD3 inhibited the expression of CD23 and CD49f, characteristic markers of retinoid-induced U-937 cell differentiation. 1 Also also ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 VitD3 VitD3 NUM CD NumType=Card _ _ _ _ 4 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 CD23 CD23 NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 CD49f CD49f NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 characteristic characteristic ADJ JJ Degree=Pos _ _ _ _ 13 markers marker NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 retinoid retinoid VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 937 937 NUM CD NumType=Card _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 990 # text = In contrast, neither the RA-stimulated, RARE-mediated transcription nor the induced RAR-beta expression was suppressed by VitD3, suggesting that VitD3 selectively inhibited the retinoid-induced differentiation program but not the RARE-mediated signal. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 neither neither CCONJ CC _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 RA Ra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 RARE rare PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 nor nor CCONJ CC _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 RAR Rar NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 beta beta NOUN NN Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 VitD3 VitD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 27 that that SCONJ IN _ _ _ _ _ 28 VitD3 VitD3 NUM CD NumType=Card _ _ _ _ 29 selectively selectively ADV RB _ _ _ _ _ 30 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 retinoid retinoid VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 36 program program NOUN NN Number=Sing _ _ _ _ 37 but but CCONJ CC _ _ _ _ _ 38 not not PART RB _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 RARE rare NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 991 # text = These results demonstrate a complex role for VitD3 in modifying the retinoid differentiation pathway and may have implications for differentiation-inducing therapy of hematopoietic tumors. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 complex complex ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 VitD3 VitD3 NUM CD NumType=Card _ _ _ _ 9 in in SCONJ IN _ _ _ _ _ 10 modifying modify VERB VBG VerbForm=Ger _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 retinoid retinoid ADJ JJ Degree=Pos _ _ _ _ 13 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 14 pathway pathway NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 may may AUX MD VerbForm=Fin _ _ _ _ 17 have have VERB VB VerbForm=Inf _ _ _ _ 18 implications implication NOUN NNS Number=Plur _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 23 therapy therapy NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 26 tumors tumor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 992 # text = Document 003002360 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002360 003002360 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 993 # text = Effects of overexpression of IL-1 receptor-associated kinase on NFkappaB activation, IL-2 production and stress-activated protein kinases in the murine T cell line EL4. 1 Effects Effects NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 production production NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 stress stress NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 protein protein NOUN NN Number=Sing _ _ _ _ 25 kinases kinase NOUN NNS Number=Plur _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 murine murine PROPN NNP Number=Sing _ _ _ _ 29 T t PROPN NNP Number=Sing _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 line line NOUN NN Number=Sing _ _ _ _ 32 EL4 El4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 994 # text = The association and activation of the IL-1 receptor-associated protein kinase (IRAK) to the IL-1 receptor complex is one of the earliest events detectable in IL-1 signal transduction. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 association association NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 kinase kinase NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 IRAK IRAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 receptor receptor NOUN NN Number=Sing _ _ _ _ 24 complex complex NOUN NN Number=Sing _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 one one NUM CD NumType=Card _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 earliest earliest ADJ JJS Degree=Sup _ _ _ _ 30 events event NOUN NNS Number=Plur _ _ _ _ 31 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT , _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ _ 36 signal signal NOUN NN Number=Sing _ _ _ _ 37 transduction transduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 995 # text = We generated permanent clones of the murine T cell line EL4 6.1 overexpressing human (h)IRAK to evaluate the role of this kinase in IL-1 signaling. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 generated generate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 permanent permanent ADJ JJ Degree=Pos _ _ _ _ 4 clones clone NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 murine murine PROPN NNP Number=Sing _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 line line NOUN NN Number=Sing _ _ _ _ 11 EL4 EL4 NUM CD NumType=Card _ _ _ _ 12 6.1 6.1 NUM CD NumType=Card _ _ _ _ 13 overexpressing overexpresse VERB VBG VerbForm=Ger _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 h h INTJ UH _ _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 IRAK IRAK PROPN NNP Number=Sing _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 evaluate evaluate VERB VB VerbForm=Inf _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 role role NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 25 kinase kinase NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 996 # text = Overexpression of hIRAK enhanced IL-1-stimulated activation of the transcription factor NFkappaB, whereas a truncated form (N-IRAK) specifically inhibited IL-1-dependent NFkappaB activity. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 hIRAK hIRAK PROPN NNP Number=Sing _ _ _ _ 4 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 whereas whereas SCONJ IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 truncated truncate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 form form NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 N N PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 IRAK IRAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 specifically specifically ADV RB _ _ _ _ _ 27 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 33 NFkappaB Nfkappab ADJ JJ Degree=Pos _ _ _ _ 34 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 997 # text = In clones stably overexpressing hIRAK a weak constitutive activation of NFkappaB correlated with a low basal IL-2 production which was enhanced in an IL-1-dependent manner. 1 In in ADP IN _ _ _ _ _ 2 clones clone NOUN NNS Number=Plur _ _ _ _ 3 stably stably ADV RB _ _ _ _ _ 4 overexpressing overexpresse VERB VBG VerbForm=Ger _ _ _ _ 5 hIRAK hIRAK PROPN NNP Number=Sing _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 weak weak ADJ JJ Degree=Pos _ _ _ _ 8 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 12 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 low low ADJ JJ Degree=Pos _ _ _ _ 16 basal basal NOUN NN Number=Sing _ _ _ _ 17 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ _ 20 production production NOUN NN Number=Sing _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 31 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 998 # text = Compared to the parental cell line the dose-response curve of IL-1-induced IL-2 production was shifted in both potency and efficacy. 1 Compared compare VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 parental parental ADJ JJ Degree=Pos _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 line line NOUN NN Number=Sing _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 response response NOUN NN Number=Sing _ _ _ _ 11 curve curve NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 production production NOUN NN Number=Sing _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 shifted shift VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 both both DET DT _ _ _ _ _ 26 potency potency NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 efficacy efficacy NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 999 # text = These results demonstrate that IRAK directly triggers NFkappaB-mediated gene expression in EL4 cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 IRAK IRAK PROPN NNP Number=Sing _ _ _ _ 6 directly directly ADV RB _ _ _ _ _ 7 triggers trigger VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 EL4 EL4 PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 1000 # text = Qualitatively different effects were observed for the IL-1-induced activation of stress-activated protein (SAP) kinases: permanent overexpression of IRAK did not affect the dose dependence but prolonged the kinetics of IL-1-induced activation of SAP kinases, suggesting that this signaling branch may be regulated by distinct mechanisms. 1 Qualitatively Qualitatively ADV RB _ _ _ _ _ 2 different different ADJ JJ Degree=Pos _ _ _ _ 3 effects effect NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 stress stress NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 SAP sap NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 : : PUNCT : _ _ _ _ _ 24 permanent permanent ADJ JJ Degree=Pos _ _ _ _ 25 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 IRAK IRAK PROPN NNP Number=Sing _ _ _ _ 28 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 not not PART RB _ _ _ _ _ 30 affect affect VERB VB VerbForm=Inf _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 dose dose NOUN NN Number=Sing _ _ _ _ 33 dependence dependence NOUN NN Number=Sing _ _ _ _ 34 but but CCONJ CC _ _ _ _ _ 35 prolonged prolong VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 activation activation NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 SAP sap NOUN NN Number=Sing _ _ _ _ 47 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 50 that that SCONJ IN _ _ _ _ _ 51 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 52 signaling signaling NOUN NN Number=Sing _ _ _ _ 53 branch branch NOUN NN Number=Sing _ _ _ _ 54 may may AUX MD VerbForm=Fin _ _ _ _ 55 be be AUX VB VerbForm=Inf _ _ _ _ 56 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 57 by by ADP IN _ _ _ _ _ 58 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 59 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1001 # text = Document 003002362 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002362 003002362 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1002 # text = Inhibition of p105 processing by NF-kappaB proteins in transiently transfected cells. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 p105 p105 NUM CD NumType=Card _ _ _ _ 4 processing processing VERB VBG VerbForm=Ger _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 transiently transiently ADV RB _ _ _ _ _ 12 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1003 # text = Regulation of the transcription factor NF-kappaB involves proteasome-mediated processing of the NF-kappaB1 p105 precursor protein, which generates the p50 subunit of NF-kappaB. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 proteasome proteasome ADV RB _ _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 processing processing NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB1 kappaB1 PROPN NNP Number=Sing _ _ _ _ 19 p105 p105 NOUN NN Number=Sing _ _ _ _ 20 precursor precursor NOUN NN Number=Sing _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 generates generate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 p50 p50 NOUN NN Number=Sing _ _ _ _ 27 subunit subunit NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1004 # text = The processing of p105 occurs constitutively in vivo but can be markedly enhanced by various cellular activation agents, although the underlying regulatory mechanism is not yet clear. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 processing processing NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p105 p105 NUM CD NumType=Card _ _ _ _ 5 occurs occur NOUN NNS Number=Plur _ _ _ _ 6 constitutively constitutively ADV RB _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 vivo vivo NOUN NN Number=Sing _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 can can AUX MD VerbForm=Fin _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 markedly markedly ADV RB _ _ _ _ _ 13 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 various various ADJ JJ Degree=Pos _ _ _ _ 16 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 agents agent NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 although although SCONJ IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 underlying underlying ADJ JJ Degree=Pos _ _ _ _ 23 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 24 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 not not PART RB _ _ _ _ _ 27 yet yet ADV RB _ _ _ _ _ 28 clear clear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1005 # text = In the present study, we demonstrate that signal-mediated induction of p105 processing in human T cells is associated with de novo synthesis of this precursor protein. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 9 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 p105 p105 NUM CD NumType=Card _ _ _ _ 15 processing processing NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 T T PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 de de NOUN NN Number=Sing _ _ _ _ 24 novo novo NOUN NN Number=Sing _ _ _ _ 25 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 precursor precursor NOUN NN Number=Sing _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1006 # text = Transient transfection studies performed in COS7 cells revealed that the newly synthesized p105 protein appears to be more rapidly processed compared to its accumulated form that is already associated with the processed product p50. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 transfection transfection NOUN NN Number=Sing _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 performed perform VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 COS7 COS7 NUM CD NumType=Card _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 newly newly ADV RB _ _ _ _ _ 12 synthesized synthesize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 p105 p105 NUM CD NumType=Card _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 more more ADV RBR _ _ _ _ _ 19 rapidly rapidly ADV RB _ _ _ _ _ 20 processed process VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 accumulated accumulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 form form NOUN NN Number=Sing _ _ _ _ 26 that that PRON WDT PronType=Rel _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 already already ADV RB _ _ _ _ _ 29 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 processed process VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 product product NOUN NN Number=Sing _ _ _ _ 34 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1007 # text = Interestingly, the processing rate of p105 is markedly inhibited in cells co-transfected with p50 or other NF-kappaB subunits, including RelA and c-Rel, that physically interact with p105. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 processing processing VERB VBG VerbForm=Ger _ _ _ _ 5 rate rate NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 p105 p105 NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 markedly markedly ADV RB _ _ _ _ _ 10 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 co-transfected co-transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 p50 p50 NOUN NN Number=Sing _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 other other ADJ JJ Degree=Pos _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 including include VERB VBG VerbForm=Ger _ _ _ _ 24 RelA Rela NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 that that SCONJ IN _ _ _ _ _ 31 physically physically ADV RB _ _ _ _ _ 32 interact interact VERB VB VerbForm=Inf _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 p105 p105 NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1008 # text = These findings suggest that the processing of p105 is subject to negative regulation by the various NF-kappaB subunits. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 processing processing NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 p105 p105 NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 subject subject ADJ JJ Degree=Pos _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 negative negative ADJ JJ Degree=Pos _ _ _ _ 13 regulation regulation NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 various various ADJ JJ Degree=Pos _ _ _ _ 17 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 20 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1009 # text = We further demonstrate that p105 undergoes degradation in lipopolysaccharide-stimulated human monocytic cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 p105 p105 NUM CD NumType=Card _ _ _ _ 6 undergoes undergo NOUN NNS Number=Plur _ _ _ _ 7 degradation degradation NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 lipopolysaccharide-stimulated lipopolysaccharide-stimulated ADJ JJ Degree=Pos _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 1010 # text = However, the inducible degradation of p105 is not coupled with the generation of p50. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 5 degradation degradation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 p105 p105 NUM CD NumType=Card _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 coupled couple VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 generation generation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 1011 # text = Together, these studies demonstrate that the processing and inducible degradation of p105 are differentially regulated. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ _ 5 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 processing processing NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 11 degradation degradation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 p105 p105 NOUN NN Number=Sing _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 differentially differentially ADV RB _ _ _ _ _ 16 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1012 # text = Document 003002363 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002363 003002363 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1013 # text = The role of jun and fos gene family members in 12-O-tetradecanoylphorbol-13-acetate induced hemopoietic differentiation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 jun jun NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 fos fo VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 gene gene ADJ JJ Degree=Pos _ _ _ _ 8 family family NOUN NN Number=Sing _ _ _ _ 9 members member NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 O of ADP IN Abbr=Yes _ _ _ SpaceAfter=No 14 -tetradecanoylphorbol -tetradecanoylphorbol ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 -13-acetate -13-acetate NOUN NN Number=Sing _ _ _ _ 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 hemopoietic hemopoietic ADJ JJ Degree=Pos _ _ _ _ 18 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1014 # text = Terminal differentiation of the leukemic cell lines U-937 and HL-60 by 12-O-tetradecanoylphorbol-13-acetate is accompanied by marked changes in gene expression. 1 Terminal Terminal NOUN NN Number=Sing _ _ _ _ 2 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 lines line NOUN NNS Number=Plur _ _ _ _ 8 U- U- PUNCT : _ _ _ _ SpaceAfter=No 9 937 937 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 HL Hl NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 60 60 NUM CD NumType=Card _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 12-O-tetradecanoylphorbol 12-O-tetradecanoylphorbol ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 -13-acetate -13-acetate NOUN NN Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 changes change NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 gene gene ADJ JJ Degree=Pos _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1015 # text = In this study, we demonstrate that the expression of jun and fos gene family members is induced with variable kinetics during 12-O-tetradecanoylphorbol-13-acetate induced differentiation, with c-jun expression best paralleling differentiation. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 jun jun NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 fos fo VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 gene gene ADJ JJ Degree=Pos _ _ _ _ 15 family family NOUN NN Number=Sing _ _ _ _ 16 members member NOUN NNS Number=Plur _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 variable variable ADJ JJ Degree=Pos _ _ _ _ 21 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 22 during during ADP IN _ _ _ _ _ 23 12-O-tetradecanoylphorbol 12-O-tetradecanoylphorbol PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 -acetate -acetate ADJ JJ Degree=Pos _ _ _ _ 26 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 c- c- SYM NFP _ _ _ _ SpaceAfter=No 31 jun jun NOUN NN Number=Sing _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ _ 33 best best ADJ JJS Degree=Sup _ _ _ _ 34 paralleling paralleling NOUN NN Number=Sing _ _ _ _ 35 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 1016 # text = The generation of AP-1 complexes, as measured by DNA binding activity, closely parallels morphological differentiation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 generation generation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 complexes complexe NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 as as SCONJ IN _ _ _ _ _ 10 measured measure VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 binding binding VERB VBG VerbForm=Ger _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 closely closely ADV RB _ _ _ _ _ 17 parallels parallel NOUN NNS Number=Plur _ _ _ _ 18 morphological morphological ADJ JJ Degree=Pos _ _ _ _ 19 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1017 # text = Furthermore, the ability of these complexes to regulate gene expression is demonstrated by increased transcription from an AP-1 driven reporter construct and marked increases in the expression of endogenous AP-1 regulated genes. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 ability ability NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 complexes complexe NOUN NNS Number=Plur _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 driven driven VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 reporter reporter NOUN NN Number=Sing _ _ _ _ 24 construct construct NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 increases increase NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 33 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT , _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ _ 36 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 1018 # text = Differentiation assays using water soluble phorbol esters reveal that differentiation becomes irreversible soon after AP-1 appears. 1 Differentiation Differentiation NOUN NN Number=Sing _ _ _ _ 2 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 using use VERB VBG VerbForm=Ger _ _ _ _ 4 water water NOUN NN Number=Sing _ _ _ _ 5 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 6 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 7 esters ester NOUN NNS Number=Plur _ _ _ _ 8 reveal reveal ADJ JJ Degree=Pos _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 11 becomes become VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 irreversible irreversible ADJ JJ Degree=Pos _ _ _ _ 13 soon soon ADV RB Degree=Pos _ _ _ _ 14 after after SCONJ IN _ _ _ _ _ 15 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1019 # text = This tight correlation between c-jun expression, the generation of AP-1 activity, and differentiation suggests a critical role for this gene and transcriptional complex during this process. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 tight tight ADJ JJ Degree=Pos _ _ _ _ 3 correlation correlation NOUN NN Number=Sing _ _ _ _ 4 between between ADP IN _ _ _ _ _ 5 c- c- SYM NFP _ _ _ _ SpaceAfter=No 6 jun jun NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 generation generation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 19 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 critical critical ADJ JJ Degree=Pos _ _ _ _ 22 role role NOUN NN Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 28 complex complex NOUN NN Number=Sing _ _ _ _ 29 during during ADP IN _ _ _ _ _ 30 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 31 process process NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1020 # text = Document 003002364 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002364 003002364 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1021 # text = p21ras initiates Rac-1 but not phosphatidyl inositol 3 kinase/PKB, mediated signaling pathways in T lymphocytes. 1 p21ras p21ras NOUN NNS Number=Plur _ _ _ _ 2 initiates initiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 Rac rac PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 but but CCONJ CC _ _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 phosphatidyl phosphatidyl VERB VB VerbForm=Inf _ _ _ _ 9 inositol inositol INTJ UH _ _ _ _ _ 10 3 3 NUM CD NumType=Card _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 PKB Pkb NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 signaling signaling VERB VBG VerbForm=Ger _ _ _ _ 17 pathways pathway NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1022 # text = p21ras is activated by the T cell antigen receptor (TCR) and then co-ordinates important signaling pathways for T lymphocyte activation. 1 p21ras p21ras NOUN NNS Number=Plur _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 antigen antigen NUM CD NumType=Card _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 TCR TCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 then then ADV RB PronType=Dem _ _ _ _ 15 co-ordinates co-ordinate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 important important ADJ JJ Degree=Pos _ _ _ _ 17 signaling signaling NOUN NN Number=Sing _ _ _ _ 18 pathways pathway NOUN NNS Number=Plur _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1023 # text = Effector pathways for this guanine nucleotide binding protein in T cells are mediated by the serine/threonine kinase Raf-1 and the Ras-related GTPase Rac-1. 1 Effector Effector NOUN NN Number=Sing _ _ _ _ 2 pathways pathway NOUN NNS Number=Plur _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 guanine guanine NOUN NN Number=Sing _ _ _ _ 6 nucleotide nucleotide NOUN NN Number=Sing _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 threonine threonine NUM CD NumType=Card _ _ _ _ 19 kinase kinase NOUN NN Number=Sing _ _ _ _ 20 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 Ras- ras- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 related relate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 GTPase GTPase PROPN NNP Number=Sing _ _ _ _ 28 Rac rac PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1024 # text = In fibroblasts, an important effector for the Ras oncogene is Phosphatidylinositol 3-kinase (PtdIns 3-kinase). 1 In in ADP IN _ _ _ _ _ 2 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 important important ADJ JJ Degree=Pos _ _ _ _ 6 effector effector NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 Ras Ras PROPN NNP Number=Sing _ _ _ _ 10 oncogene oncogene PROPN NNP Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 Phosphatidylinositol Phosphatidylinositol PROPN NNP Number=Sing _ _ _ _ 13 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT : _ _ _ _ SpaceAfter=No 15 kinase kinase NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 PtdIns PtdIn NOUN NNS Number=Plur _ _ _ _ 18 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - PUNCT : _ _ _ _ SpaceAfter=No 20 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1025 # text = Activation of this lipid kinase is able to induce critical Rac-1 signaling pathways and can couple p21ras to cell survival mechanisms via the serine/threonine kinase Akt/PKB. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 lipid lipid NOUN NN Number=Sing _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 able able ADJ JJ Degree=Pos _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 induce induce VERB VB VerbForm=Inf _ _ _ _ 10 critical critical ADJ JJ Degree=Pos _ _ _ _ 11 Rac rac PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 signaling signaling NOUN NN Number=Sing _ _ _ _ 15 pathways pathway NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 can can AUX MD VerbForm=Fin _ _ _ _ 18 couple couple VERB VB VerbForm=Inf _ _ _ _ 19 p21ras p21ra NOUN NNS Number=Plur _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 cell cell VERB VB VerbForm=Inf _ _ _ _ 22 survival survival NOUN NN Number=Sing _ _ _ _ 23 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 24 via via ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 / / PUNCT , _ _ _ _ SpaceAfter=No 28 threonine threonine NUM CD NumType=Card _ _ _ _ 29 kinase kinase NOUN NN Number=Sing _ _ _ _ 30 Akt Akt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 / / PUNCT , _ _ _ _ SpaceAfter=No 32 PKB PKB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1026 # text = The role of PtdIns 3-kinase in Ras signaling in T cells has not been explored. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 PtdIns PtdIns PROPN NNPS Number=Plur _ _ _ _ 5 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT : _ _ _ _ SpaceAfter=No 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 Ras Ras PROPN NNP Number=Sing _ _ _ _ 10 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 T T PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 17 explored explore VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1027 # text = In the present study, we examined the ability of PtdIns 3-kinase to initiate the Rac-1 signaling pathways important for T cell activation. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 ability ability NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 PtdIns PtdIns PROPN NNPS Number=Plur _ _ _ _ 12 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kinase kinase NOUN NN Number=Sing _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 initiate initiate VERB VB VerbForm=Inf _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 Rac rac PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 signaling signaling NOUN NN Number=Sing _ _ _ _ 22 pathways pathway NOUN NNS Number=Plur _ _ _ _ 23 important important ADJ JJ Degree=Pos _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1028 # text = We also examined the possibility that Akt/PKB is regulated by Ras signaling pathways in T lymphocytes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 possibility possibility NOUN NN Number=Sing _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 Akt Akt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 PKB PKB PROPN NNP Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 Ras Ras SCONJ IN _ _ _ _ _ 14 signaling signaling VERB VBG VerbForm=Ger _ _ _ _ 15 pathways pathways NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1029 # text = The results show that Ras can initiate a Rac-1 mediated pathway that regulates the transcriptional function of AP-1 complexes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Ras Ras PROPN NNP Number=Sing _ _ _ _ 6 can can AUX MD VerbForm=Fin _ _ _ _ 7 initiate initiate VERB VB VerbForm=Inf _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 Rac rac PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 X LS _ _ _ _ _ 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 pathway pathway NOUN NN Number=Sing _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 function function NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1030 # text = PtdIns 3-kinase signals cannot mimic p21ras and induce the Rac mediated responses of AP-1 transcriptional activation. 1 PtdIns PtdIn NOUN NNS Number=Plur _ _ _ _ 2 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kinase kinase NOUN NN Number=Sing _ _ _ _ 5 signals signal NOUN NNS Number=Plur _ _ _ _ 6 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 7 not not PART RB _ _ _ _ _ 8 mimic mimic ADJ JJ Degree=Pos _ _ _ _ 9 p21ras p21ra NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 induce induce VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 Rac Rac PROPN NNP Number=Sing _ _ _ _ 14 mediated mediate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 responses response NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1031 # text = Moreover, neither TCR or Ras activation of AP-1 is dependent on PtdIns 3-kinase. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 neither neither CCONJ CC _ _ _ _ _ 4 TCR TCR PROPN NNP Number=Sing _ _ _ _ 5 or or CCONJ CC _ _ _ _ _ 6 Ras Ras PROPN NNP Number=Sing _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 PtdIns PtdIns PROPN NNPS Number=Plur _ _ _ _ 16 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 -kinase -kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1032 # text = PKB is activated in response to triggering of the T cell antigen receptor; PtdIns 3-kinase activity is both required and sufficient for this TCR response. 1 PKB PKB PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 response response NOUN NN Number=Sing _ _ _ _ 6 to to SCONJ IN _ _ _ _ _ 7 triggering triggere VERB VBG VerbForm=Ger _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 T T PROPN NNP Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 antigen antigen NUM CD NumType=Card _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ; ; PUNCT , _ _ _ _ _ 15 PtdIns PtdIns NOUN NNS Number=Plur _ _ _ _ 16 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kinase kinase NOUN NN Number=Sing _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 both both ADV RB _ _ _ _ _ 22 required required VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 27 TCR Tcr NOUN NN Number=Sing _ _ _ _ 28 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1033 # text = In contrast, p21ras signals are unable to induce Akt/PKB activity in T cell nor is Ras function required for Akt/PKB activation in response to the TCR. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 p21ras p21ras NOUN NN Number=Sing _ _ _ _ 5 signals signal NOUN NNS Number=Plur _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 unable unable ADJ JJ Degree=Pos _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 induce induce VERB VB VerbForm=Inf _ _ _ _ 10 Akt Akt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 PKB PKB PROPN NNP Number=Sing _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cell cell PROPN NNP Number=Sing _ _ _ _ 17 nor nor CCONJ CC _ _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 Ras Ras PROPN NNP Number=Sing _ _ _ _ 20 function function NOUN NN Number=Sing _ _ _ _ 21 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 Akt Akt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 / / PUNCT , _ _ _ _ SpaceAfter=No 25 PKB PKB PROPN NNP Number=Sing _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 response response NOUN NN Number=Sing _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 TCR Tcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1034 # text = The present data thus highlight that PtdIns 3-kinase and Akt/PKB are not universal Ras effector molecules. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 data data NOUN NN Number=Sing _ _ _ _ 4 thus thus ADV RB _ _ _ _ _ 5 highlight highlight VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 PtdIns PtdIns PROPN NNPS Number=Plur _ _ _ _ 8 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kinase kinase NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 Akt Akt NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 / / PUNCT , _ _ _ _ SpaceAfter=No 14 PKB Pkb NOUN NN Number=Sing _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 universal universal ADJ JJ Degree=Pos _ _ _ _ 18 Ras Ras PROPN NNP Number=Sing _ _ _ _ 19 effector effector NOUN NN Number=Sing _ _ _ _ 20 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1035 # text = Ras can initiate Rac-1 regulated signaling pathways in the context of T cell antigen receptor function independently of PtdIns 3-kinase activity. 1 Ras Ra NOUN NNS Number=Plur _ _ _ _ 2 can can AUX MD VerbForm=Fin _ _ _ _ 3 initiate initiate VERB VB VerbForm=Inf _ _ _ _ 4 Rac rac PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 signaling signaling VERB VBG VerbForm=Ger _ _ _ _ 9 pathways pathway NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 context context NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cell cell PROPN NNP Number=Sing _ _ _ _ 16 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 function function NOUN NN Number=Sing _ _ _ _ 19 independently independently ADV RB _ _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 PtdIns PtdIns PROPN NNPS Number=Plur _ _ _ _ 22 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kinase kinase NOUN NN Number=Sing _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1036 # text = Document 003002368 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002368 003002368 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1037 # text = Calcineurin activates transcription from the GM-CSF promoter in synergy with either protein kinase C or NF-kappa B/AP-1 in T cells. 1 Calcineurin Calcineurin PROPN NNP Number=Sing _ _ _ _ 2 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 CSF CSF PROPN NNP Number=Sing _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 synergy synergy NOUN NN Number=Sing _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 either either CCONJ CC _ _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 kinase kinase NOUN NN Number=Sing _ _ _ _ 16 C c PROPN NNP Number=Sing _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa PROPN NNP Number=Sing _ _ _ _ 21 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 /AP /ap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 T t PROPN NNP Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1038 # text = Two cis-acting elements GM-kappa B/GC-box and CLE0, of the granulocyte-macrophage colony-stimulating factor (GM-CSF) gene are required for maximal induction in Jurkat T cells by costimulation with phorbol-12-myristate acetate (PMA) and Ca2+ ionophore (A23187). 1 Two two NUM CD NumType=Card _ _ _ _ 2 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 acting acte VERB VBG VerbForm=Ger _ _ _ _ 5 elements element NOUN NNS Number=Plur _ _ _ _ 6 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B/GC B/gc NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 box box NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 CLE0 CLE0 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 20 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 gene gene PRON NN Number=Sing _ _ _ _ 30 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 34 induction induction NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 37 T t PROPN NNP Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ _ 39 by by ADP IN _ _ _ _ _ 40 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 41 with with ADP IN _ _ _ _ _ 42 phorbol phorbol NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 myristate myristate NOUN NN Number=Sing _ _ _ _ 47 acetate acetate NOUN NN Number=Sing _ _ _ _ 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 53 + + SYM SYM _ _ _ _ _ 54 ionophore ionophore NOUN NN Number=Sing _ _ _ _ 55 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 56 A23187 A23187 NUM CD NumType=Card _ _ _ SpaceAfter=No 57 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 1039 # text = The GM-kappa B sequence is recognized by NF-kappa B, which is mainly induced by PMA. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 GM gm NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 sequence sequence NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 recognized recognize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa PROPN NNP Number=Sing _ _ _ _ 13 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 mainly mainly ADV RB _ _ _ _ _ 18 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1040 # text = The CLE0 sequence interacts with factors, related to a PMA-induced AP-1 and a PMA/A23187-induced NF-AT. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 CLE0 CLE0 NUM CD NumType=Card _ _ _ _ 3 sequence sequence NOUN NN Number=Sing _ _ _ _ 4 interacts interact NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 related related ADJ JJ Degree=Pos _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 PMA/A23187 PMA/A23187 NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1041 # text = We examined whether signal transducing components in T cells can activate transcription of the GM-CSF gene. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 signal signal NOUN NN Number=Sing _ _ _ _ 5 transducing transduce VERB VBG VerbForm=Ger _ _ _ _ 6 components component NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 can can AUX MD VerbForm=Fin _ _ _ _ 11 activate activate VERB VB VerbForm=Inf _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 CSF CSF PROPN NNP Number=Sing _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1042 # text = Cotransfection of NF-kappa B (p50/p65)- or AP-1 (c-Jun/c-Fos)- expression vectors into Jurkat cells with a luciferase reporter containing the GM-CSF promoter did not stimulate transcription from the GM-CSF promoter. 1 Cotransfection Cotransfection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B b PROPN NNP Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 p50/ p50ith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 9 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 )- )- PUNCT . _ _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 c- c- SYM NFP _ _ _ _ SpaceAfter=No 17 Jun/c Jun/c PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 Fos Fos PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 - - PUNCT : _ _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 vectors vector NOUN NNS Number=Plur _ _ _ _ 24 into into ADP IN _ _ _ _ _ 25 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 30 reporter reporter NOUN NN Number=Sing _ _ _ _ 31 containing contain VERB VBG VerbForm=Ger _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 CSF CSF PROPN NNP Number=Sing _ _ _ _ 36 promoter promoter NOUN NN Number=Sing _ _ _ _ 37 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 38 not not PART RB _ _ _ _ _ 39 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 40 transcription transcription NOUN NN Number=Sing _ _ _ _ 41 from from ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 CSF CSF PROPN NNP Number=Sing _ _ _ _ 46 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 1043 # text = In contrast, cotransfection with a combination of NF-kappa B and AP-1 significantly augmented transcription from the GM-CSF promoter containing the GM-kappa B/GC-box and the CLE0 (AP-1/NF-AT). 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 cotransfection cotransfection NOUN NN Number=Sing _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 combination combination NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 significantly significantly ADV RB _ _ _ _ _ 18 augmented augment VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 CSF CSF PROPN NNP Number=Sing _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ _ 26 containing contain VERB VBG VerbForm=Ger _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappa kappa PROPN NNP Number=Sing _ _ _ _ 31 B/GC B/gc NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 box box NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 CLE0 CLE0 NOUN NN Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 1/NF 1/nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 AT At NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 1044 # text = Expression of a constitutively active calcineurin (CN), a Ca2+/calmodulin-dependent protein phosphatase, potentiated by two fold the transcriptional activation by NF-kappa B/AP-1. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 constitutively constitutively ADV RB _ _ _ _ _ 5 active active ADJ JJ Degree=Pos _ _ _ _ 6 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 CN CN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 Ca2+/calmodulin Ca2+/calmodulin NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 phosphatase phosphatase NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 potentiated potentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 two two NUM CD NumType=Card _ _ _ _ 21 fold fold NOUN NN Number=Sing _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa PROPN NNP Number=Sing _ _ _ _ 29 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 / / PUNCT , _ _ _ _ SpaceAfter=No 31 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1045 # text = Both constitutively active forms of CN and protein kinase C (PKC) synergistically activated transcription from the GM-CSF promoter. 1 Both both DET DT _ _ _ _ _ 2 constitutively constitutively ADV RB _ _ _ _ _ 3 active active ADJ JJ Degree=Pos _ _ _ _ 4 forms form NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 CN Cn NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 kinase kinase NOUN NN Number=Sing _ _ _ _ 10 C C PROPN NNP Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 synergistically synergistically ADV RB _ _ _ _ _ 15 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 CSF CSF PROPN NNP Number=Sing _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1046 # text = These results suggest that cooperation among NF-kappa B-, AP-1- and NF-AT-binding sequences is required for induction of the GM-CSF gene through PKC- and Ca2+- signaling pathways downstream of T cell activation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 cooperation cooperation NOUN NN Number=Sing _ _ _ _ 6 among among ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 AT at NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 binding binding VERB VBG VerbForm=Ger _ _ _ _ 23 sequences sequence NOUN NNS Number=Plur _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 induction induction NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 CSF CSF PROPN NNP Number=Sing _ _ _ _ 33 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 through through ADP IN _ _ _ _ _ 35 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT , _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 Ca2 Ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 +- +- PUNCT , _ _ _ _ _ 40 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 41 pathways pathways NOUN NNS Number=Plur _ _ _ _ 42 downstream downstream NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 T t PROPN NNP Number=Sing _ _ _ _ 45 cell cell NOUN NN Number=Sing _ _ _ _ 46 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1047 # text = Document 003002369 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002369 003002369 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1048 # text = Nasal NK- and T-cell lymphomas share the same type of Epstein-Barr virus latency as nasopharyngeal carcinoma and Hodgkin's disease. 1 Nasal Nasal PROPN NNP Number=Sing _ _ _ _ 2 NK NK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 lymphomas lymphoma NOUN NNS Number=Plur _ _ _ _ 8 share share VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 same same ADJ JJ Degree=Pos _ _ _ _ 11 type type NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 Barr Barr PROPN NNP Number=Sing _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ _ 17 latency latency NOUN NN Number=Sing _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 nasopharyngeal nasopharyngeal ADJ JJ Degree=Pos _ _ _ _ 20 carcinoma carcinoma NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 Hodgkin Hodgkin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 's 's PART POS _ _ _ _ _ 24 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1049 # text = Nasal T/NK-cell lymphomas can be further separated into those of natural killer (NK) cell lineage or of T-cell lineage, with differences in cellular phenotype, T-cell receptor (TcR) gene rearrangement and TcR transcript expression. 1 Nasal Nasal PROPN NNP Number=Sing _ _ _ _ 2 T/NK T/NK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 lymphomas lymphoma NOUN NNS Number=Plur _ _ _ _ 6 can can AUX MD VerbForm=Fin _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 further further ADV RB _ _ _ _ _ 9 separated separate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 into into ADP IN _ _ _ _ _ 11 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 natural natural ADJ JJ Degree=Pos _ _ _ _ 14 killer killer NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 NK NK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 lineage lineage NOUN NN Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 differences difference NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 30 phenotype phenotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 T- T- SYM NFP _ _ _ _ SpaceAfter=No 33 cell cell NOUN NN Number=Sing _ _ _ _ 34 receptor receptor NOUN NN Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 TcR TcR NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 gene gene NOUN NN Number=Sing _ _ _ _ 39 rearrangement rearrangement NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 TcR Tcr ADV RBR Degree=Cmp _ _ _ _ 42 transcript transcript ADJ JJ Degree=Pos _ _ _ _ 43 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 1050 # text = Both NK- and T-cell subtypes are closely associated with Epstein-Barr virus (EBV). 1 Both both CCONJ CC _ _ _ _ _ 2 NK Nk PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 subtypes subtype NOUN NNS Number=Plur _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 closely closely ADV RB _ _ _ _ _ 10 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 Barr Barr PROPN NNP Number=Sing _ _ _ _ 15 virus virus NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1051 # text = In this study, EBV gene expression was determined in 23 cases of nasal lymphoma (NL) by in situ hybridisation (ISH), reverse transcriptase-polymerase chain reaction (RT-PCR) and immunohistochemistry (IH). 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 EBV EBV PROPN NNP Number=Sing _ _ _ _ 6 gene gene ADJ JJ Degree=Pos _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 23 23 NUM CD NumType=Card _ _ _ _ 12 cases case NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 nasal nasal ADJ JJ Degree=Pos _ _ _ _ 15 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 NL NL INTJ UH _ _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 situ situ NOUN NN Number=Sing _ _ _ _ 22 hybridisation hybridisation NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 ISH ISH INTJ UH _ _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 reverse reverse VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 transcriptase transcriptase NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 31 chain chain NOUN NN Number=Sing _ _ _ _ 32 reaction reaction NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 RT Rt NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 PCR Pcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 immunohistochemistry immunohistochemistry NOUN NN Number=Sing _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 IH IH INTJ UH _ _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 1052 # text = Of the 23 cases, 19 were classified as NK-cell and 4 as T-cell tumours. 1 Of of ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 23 23 NUM CD NumType=Card _ _ _ _ 4 cases case NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 19 19 NUM CD NumType=Card _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 classified classify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 NK NK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 4 4 NUM CD NumType=Card _ _ _ _ 15 as as ADV RB _ _ _ _ _ 16 T- T- SYM NFP _ _ _ _ SpaceAfter=No 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 tumours tumour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1053 # text = ISH for EBV-encoded small non-polyadenylated RNAs showed that all cases, whether NK or T, harboured EBV in virtually all tumour cells. 1 ISH ISh PROPN NNP Number=Sing _ _ _ _ 2 for for ADP IN _ _ _ _ _ 3 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 encoded encode VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 small small ADJ JJ Degree=Pos _ _ _ _ 7 non-polyadenylated non-polyadenylated ADJ JJ Degree=Pos _ _ _ _ 8 RNAs RNA NOUN NNS Number=Plur _ _ _ _ 9 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 all all DET DT _ _ _ _ _ 12 cases case NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 whether whether SCONJ IN _ _ _ _ _ 15 NK NK PROPN NNP Number=Sing _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 harboured harboure VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 EBV EBV PROPN NNP Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 virtually virtually ADV RB _ _ _ _ _ 23 all all DET PDT _ _ _ _ _ 24 tumour tumour NUM CD NumType=Card _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1054 # text = RT-PCR demonstrated that NL of both subtypes expressed EBNAI of the QUK splice pattern, the latent membrane proteins, LMP1 and 2 and the BamHI A rightward transcripts in the absence of EBNA2 mRNAs, compatible with the latency type II pattern. 1 RT Rt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -PCR -PCR PROPN NNP Number=Sing _ _ _ _ 3 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 NL Nl NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 both both DET DT _ _ _ _ _ 8 subtypes subtype NOUN NNS Number=Plur _ _ _ _ 9 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 EBNAI EBNAI NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 QUK QUK PROPN NNP Number=Sing _ _ _ _ 14 splice splice NOUN NN Number=Sing _ _ _ _ 15 pattern pattern NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 latent latent ADJ JJ Degree=Pos _ _ _ _ 19 membrane membrane NOUN NN Number=Sing _ _ _ _ 20 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 2 2 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 BamHI BamHI PROPN NNP Number=Sing _ _ _ _ 28 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 rightward rightward ADJ JJ Degree=Pos _ _ _ _ 30 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 absence absence NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 EBNA2 EBNA2 NUM CD NumType=Card _ _ _ _ 36 mRNAs mRNA NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 compatible compatible ADJ JJ Degree=Pos _ _ _ _ 39 with with ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 latency latency NOUN NN Number=Sing _ _ _ _ 42 type type NOUN NN Number=Sing _ _ _ _ 43 II ii NUM CD NumType=Card _ _ _ _ 44 pattern pattern NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 1055 # text = In addition, analysis of EBV protein expression by IH revealed a heterogeneous pattern of EBV gene expression at the single-cell level consisting of both LMP1+ and LMP1- tumour cells, suggesting a mixture of latency I and II. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 EBV EBV PROPN NNP Number=Sing _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 IH IH PROPN NNP Number=Sing _ _ _ _ 11 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 heterogeneous heterogeneous ADJ JJ Degree=Pos _ _ _ _ 14 pattern pattern NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 EBV EBV PROPN NNP Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 at at ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 single single ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 level level NOUN NN Number=Sing _ _ _ _ 25 consisting consisting VERB VBG VerbForm=Ger _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 both both CCONJ CC _ _ _ _ _ 28 LMP1 LMP1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 + + SYM SYM _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 LMP1 LMP1 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ _ 33 tumour tumour NOUN NN Number=Sing _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 37 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 mixture mixture NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 latency latency NOUN NN Number=Sing _ _ _ _ 41 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 II ii PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 1056 # text = Although 2 early lytic transcripts, BZLF1 and BHRF1, were also detected in 13 and 10 cases, respectively, the lack of ZEBRA staining in any case indicates that these lytic transcripts are most likely expressed by rare cells in the biopsies entering lytic cycle. 1 Although although SCONJ IN _ _ _ _ _ 2 2 2 NUM CD NumType=Card _ _ _ _ 3 early early ADJ JJ Degree=Pos _ _ _ _ 4 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 5 transcripts transcript NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 BZLF1 BZLF1 PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 BHRF1 BHRF1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 also also ADV RB _ _ _ _ _ 13 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 13 13 NUM CD NumType=Card _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 10 10 NUM CD NumType=Card _ _ _ _ 18 cases case NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 lack lack NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 ZEBRA zebra PROPN NNP Number=Sing _ _ _ _ 26 staining stai VERB VBG VerbForm=Ger _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 any any DET DT _ _ _ _ _ 29 case case NOUN NN Number=Sing _ _ _ _ 30 indicates indicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 that that SCONJ IN _ _ _ _ _ 32 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 33 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 34 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 35 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 36 most most ADV RBS _ _ _ _ _ 37 likely likely ADV RB _ _ _ _ _ 38 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 by by ADP IN _ _ _ _ _ 40 rare rare ADJ JJ Degree=Pos _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 biopsies biopsy NOUN NNS Number=Plur _ _ _ _ 45 entering enter VERB VBG VerbForm=Ger _ _ _ _ 46 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 47 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 1057 # text = The viral transcriptional pattern similar to that of nasopharyngeal carcinoma and Hodgkin's disease suggests that EBV can exploit common regulatory mechanisms for gene transcription in diverse host cell types. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 viral viral ADJ JJ Degree=Pos _ _ _ _ 3 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 4 pattern pattern NOUN NN Number=Sing _ _ _ _ 5 similar similar ADJ JJ Degree=Pos _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 nasopharyngeal nasopharyngeal ADJ JJ Degree=Pos _ _ _ _ 10 carcinoma carcinoma NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 Hodgkin Hodgkin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 's 's PART POS _ _ _ _ _ 14 disease disease NOUN NN Number=Sing _ _ _ _ 15 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 EBV EBV PROPN NNP Number=Sing _ _ _ _ 18 can can AUX MD VerbForm=Fin _ _ _ _ 19 exploit exploit VERB VB VerbForm=Inf _ _ _ _ 20 common common ADJ JJ Degree=Pos _ _ _ _ 21 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 22 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 diverse diverse ADJ JJ Degree=Pos _ _ _ _ 28 host host NOUN NN Number=Sing _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1058 # text = Down-regulation of immunogenic proteins (EBNA2-EBNA6) in nasal lymphoma may enable tumour cells to evade host cytotoxic T-cell surveillance. 1 Down down ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 regulation regulation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 immunogenic immunogenic ADJ JJ Degree=Pos _ _ _ _ 6 proteins protein NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 EBNA2 EBNA2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - SYM SYM _ _ _ _ SpaceAfter=No 10 EBNA6 EBNA6 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 nasal nasal ADJ JJ Degree=Pos _ _ _ _ 14 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 15 may may AUX MD VerbForm=Fin _ _ _ _ 16 enable enable VERB VB VerbForm=Inf _ _ _ _ 17 tumour tumour PRON PRP$ Person=2|Poss=Yes|PronType=Prs _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 evade evade VERB VB VerbForm=Inf _ _ _ _ 21 host host NOUN NN Number=Sing _ _ _ _ 22 cytotoxic cytotoxic NOUN NN Number=Sing _ _ _ _ 23 T- t- PUNCT : _ _ _ _ SpaceAfter=No 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 surveillance surveillance NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1059 # text = Document 003002373 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002373 003002373 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1060 # text = Stimulation of CD40 on immunogenic human malignant melanomas augments their cytotoxic T lymphocyte-mediated lysis and induces apoptosis. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 immunogenic immunogenic ADJ JJ Degree=Pos _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 malignant malignant ADJ JJ Degree=Pos _ _ _ _ 8 melanomas melanoma NOUN NNS Number=Plur _ _ _ _ 9 augments augment NOUN NNS Number=Plur _ _ _ _ 10 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 11 cytotoxic cytotoxic ADJ JJ Degree=Pos _ _ _ _ 12 T T PROPN NNP Number=Sing _ _ _ _ 13 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 lysis lysis NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 induces induce NOUN NNS Number=Plur _ _ _ _ 19 apoptosis apoptosis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1061 # text = Here, we report the functional expression of CD40 on human malignant melanomas (MMs). 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 functional functional ADJ JJ Degree=Pos _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 CD40 CD40 NUM CD NumType=Card _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 malignant malignant ADJ JJ Degree=Pos _ _ _ _ 13 melanomas melanoma NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 MMs Mms PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1062 # text = Comparison of tumor specimen from MM precursor lesions, primary tumors, and metastases revealed that CD40 surface expression is down-regulated during tumor progression. 1 Comparison Comparison NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 tumor tumor NOUN NN Number=Sing _ _ _ _ 4 specimen speciman NOUN NN Number=Sing _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 MM mm NUM CD NumType=Card _ _ _ _ 7 precursor precursor NOUN NN Number=Sing _ _ _ _ 8 lesions lesion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 primary primary ADJ JJ Degree=Pos _ _ _ _ 11 tumors tumor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 metastases metastase NOUN NNS Number=Plur _ _ _ _ 15 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 18 surface surface NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 down down ADV RB _ _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 during during ADP IN _ _ _ _ _ 25 tumor tumor NOUN NN Number=Sing _ _ _ _ 26 progression progression NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1063 # text = CD40 expression was confirmed in 7 human MM cell lines established from immunogenic primary tumors or metastases, whereas 11 cell lines established from advanced stages were CD40 negative. 1 CD40 CD40 NUM CD NumType=Card _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 confirmed confirm VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 7 7 NUM CD NumType=Card _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 MM mm NUM CD NumType=Card _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 lines line NOUN NNS Number=Plur _ _ _ _ 11 established establish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 immunogenic immunogenic ADJ JJ Degree=Pos _ _ _ _ 14 primary primary ADJ JJ Degree=Pos _ _ _ _ 15 tumors tumor NOUN NNS Number=Plur _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 metastases metastase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 whereas whereas SCONJ IN _ _ _ _ _ 20 11 11 NUM CD NumType=Card _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 lines line NOUN NNS Number=Plur _ _ _ _ 23 established establish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 advanced advanced ADJ JJ Degree=Pos _ _ _ _ 26 stages stage NOUN NNS Number=Plur _ _ _ _ 27 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 29 negative negative NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1064 # text = CD40 expression could be enhanced in CD40-positive MM by stimulation with IFN-gamma and tumor necrosis factor-alpha but not by interleukin (IL)-1beta or CD40 triggering. 1 CD40 CD40 NOUN NN Number=Sing _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 could could AUX MD VerbForm=Fin _ _ _ _ 4 be be AUX VB VerbForm=Inf _ _ _ _ 5 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 positive positive ADJ JJ Degree=Pos _ _ _ _ 10 MM mm PROPN NNP Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 IFN- Ifn- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 gamma gamma NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 tumor tumor NOUN NN Number=Sing _ _ _ _ 18 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 alpha alpha NOUN NN Number=Sing _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 not not ADV RB _ _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 beta beta NOUN NN Number=Sing _ _ _ _ 32 or or CCONJ CC _ _ _ _ _ 33 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 34 triggering triggering VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1065 # text = CD40 ligation on MM by CD40L-transfected murine L-cells or by a soluble CD40L fusion protein up-regulated their expression of intercellular adhesion molecule-1 and MHC class I and class II molecules and their secretion of IL-6, IL-8, tumor necrosis factor-a, and granulocyte macrophage colony-stimulating factor and also induced a rapid activation of the transcription factor nuclear factor kappaB. 1 CD40 CD40 NUM CD NumType=Card _ _ _ _ 2 ligation ligation NOUN NN Number=Sing _ _ _ _ 3 on on ADP IN _ _ _ _ _ 4 MM mm PROPN NNP Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 CD40L CD40L PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 murine murine PRON PRP _ _ _ _ _ 10 L- L- SYM NFP _ _ _ _ SpaceAfter=No 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 16 CD40L Cd40l NOUN NN Number=Sing _ _ _ _ 17 fusion fusion NOUN NN Number=Sing _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 up up ADV RB _ _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 intercellular intercellular ADJ JJ Degree=Pos _ _ _ _ 26 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 27 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 MHC MHC PROPN NNP Number=Sing _ _ _ _ 32 class class NOUN NN Number=Sing _ _ _ _ 33 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 class class NOUN NN Number=Sing _ _ _ _ 36 II ii NUM CD NumType=Card _ _ _ _ 37 molecules molecule NOUN NNS Number=Plur _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 40 secretion secretion NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 tumor tumor NOUN NN Number=Sing _ _ _ _ 51 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 52 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 54 a a NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 , , PUNCT , _ _ _ _ _ 56 and and CCONJ CC _ _ _ _ _ 57 granulocyte granulocyte ADJ JJ Degree=Pos _ _ _ _ 58 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 59 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 61 stimulating stimulating NOUN NN Number=Sing _ _ _ _ 62 factor factor NOUN NN Number=Sing _ _ _ _ 63 and and CCONJ CC _ _ _ _ _ 64 also also ADV RB _ _ _ _ _ 65 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 66 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 67 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 68 activation activation NOUN NN Number=Sing _ _ _ _ 69 of of ADP IN _ _ _ _ _ 70 the the DET DT Definite=Def|PronType=Art _ _ _ _ 71 transcription transcription NOUN NN Number=Sing _ _ _ _ 72 factor factor NOUN NN Number=Sing _ _ _ _ 73 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 74 factor factor NOUN NN Number=Sing _ _ _ _ 75 kappaB kappaB NOUN NN Number=Sing _ _ _ SpaceAfter=No 76 . . PUNCT . _ _ _ _ _ # sent_id = 1066 # text = Furthermore, CD40 ligation of a HLA-A2+, MelanA/MART1+ 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 CD40 CD40 NUM CD NumType=Card _ _ _ _ 4 ligation ligation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 HLA HLa NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 A2+ a2+ NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 MelanA MelanA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 MART1 MART1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 + + SYM NFP _ _ _ _ _ # sent_id = 1067 # text = MM 1 MM mm X ADD _ _ _ _ _ # sent_id = 1068 # text = cell line enhanced its susceptibility to specific lysis by a HLA-A2-restricted, MelanA/MART-1-specific 1 cell cell NOUN NN Number=Sing _ _ _ _ 2 line line NOUN NN Number=Sing _ _ _ _ 3 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 5 susceptibility susceptibility NOUN NN Number=Sing _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 lysis lysis NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 HLA HLa NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 A2 a2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 MelanA/ MelanA/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 18 MART Mart PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 -specific -specific ADJ JJ Degree=Pos _ _ _ _ # sent_id = 1069 # text = CTL clone. 1 CTL Ctl ADJ JJ Degree=Pos _ _ _ _ 2 clone clone NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 . . PUNCT . _ _ _ _ _ # sent_id = 1070 # text = Finally, CD40 ligation induced growth inhibition and apoptosis in MM. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 CD40 CD40 NUM CD NumType=Card _ _ _ _ 4 ligation ligation NOUN NN Number=Sing _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 growth growth NOUN NN Number=Sing _ _ _ _ 7 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 MM mm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 1071 # text = These results indicate that CD40-CD40L interactions may play an important role in augmenting antitumor immunity and inducing apoptosis in some CD40-positive immunogenic human MMs. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 CD40- Cd40- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 CD40L Cd40l NOUN NN Number=Sing _ _ _ _ 7 interactions interaction NOUN NNS Number=Plur _ _ _ _ 8 may may AUX MD VerbForm=Fin _ _ _ _ 9 play play VERB VB VerbForm=Inf _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 important important ADJ JJ Degree=Pos _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 in in SCONJ IN _ _ _ _ _ 14 augmenting augment VERB VBG VerbForm=Ger _ _ _ _ 15 antitumor antitumor NOUN NN Number=Sing _ _ _ _ 16 immunity immunity NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 19 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 some some DET DT _ _ _ _ _ 22 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 positive positive ADJ JJ Degree=Pos _ _ _ _ 25 immunogenic immunogenic ADJ JJ Degree=Pos _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 MMs MM NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1072 # text = Document 003002382 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002382 003002382 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1073 # text = Involvement of adenylate cyclase and p70(S6)-kinase activation in IL-10 up-regulation in human monocytes by gp41 envelope protein of human immunodeficiency virus type 1. 1 Involvement involvement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 adenylate adenylate ADJ JJ Degree=Pos _ _ _ _ 4 cyclase cyclase NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 p70 p70 NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 S6 S6 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 - - PUNCT : _ _ _ _ SpaceAfter=No 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 10 10 NUM CD NumType=Card _ _ _ _ 17 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 regulation regulation NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 gp41 gp41 NUM CD NumType=Card _ _ _ _ 25 envelope envelope NOUN NN Number=Sing _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 30 virus virus NOUN NN Number=Sing _ _ _ _ 31 type type NOUN NN Number=Sing _ _ _ _ 32 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1074 # text = Our previous results show that recombinant gp41 (aa565-647), the extracellular domain of HIV-1 transmembrane glycoprotein, stimulates interleukin-10 (IL-10) production in human monocytes. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 previous previous ADJ JJ Degree=Pos _ _ _ _ 3 results result NOUN NNS Number=Plur _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 7 gp41 gp41 NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 aa565- aa565- SYM SYM _ _ _ _ SpaceAfter=No 10 647 647 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 15 domain domain NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 transmembrane transmembrane NOUN NN Number=Sing _ _ _ _ 21 glycoprotein glycoprotein NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 stimulates stimulate NOUN NNS Number=Plur _ _ _ _ 24 interleukin interleukin VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 25 -10 -10 NUM CD NumType=Card _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 production production NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 human human ADJ JJ Degree=Pos _ _ _ _ 34 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1075 # text = The signal cascade transducing this effect is not yet clear. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 signal signal NOUN NN Number=Sing _ _ _ _ 3 cascade cascade NOUN NN Number=Sing _ _ _ _ 4 transducing transduce VERB VBG VerbForm=Ger _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 effect effect NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 yet yet ADV RB _ _ _ _ _ 10 clear clear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 1076 # text = In this study, we examined whether gp41-induced IL-10 up-regulation is mediated by the previously described synergistic activation of cAMP and NF-kappaB pathways. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 whether whether SCONJ IN _ _ _ _ _ 8 gp41 gp41 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 -induced -induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 10 10 NUM CD NumType=Card _ _ _ _ 13 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 regulation regulation NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 previously previously ADV RB _ _ _ _ _ 21 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 cAMP camp PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 30 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1077 # text = gp41 induced cAMP accumulation in monocytes in a time- and concentration-dependent manner and the adenylate cyclase inhibitor SQ 22536 suppressed gp41-induced IL-10 production in monocytes. 1 gp41 gp41 X LS _ _ _ _ _ 2 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 cAMP camp NOUN NN Number=Sing _ _ _ _ 4 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 concentration concentration NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 manner manner NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 adenylate adenylate ADJ JJ Degree=Pos _ _ _ _ 19 cyclase cyclase NOUN NN Number=Sing _ _ _ _ 20 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 21 SQ sq NOUN NN Number=Sing _ _ _ _ 22 22536 22536 NUM CD NumType=Card _ _ _ _ 23 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 gp41 gp41 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 -induced -induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 10 10 NUM CD NumType=Card _ _ _ _ 29 production production NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1078 # text = In contrast, gp41 failed to stimulate NF-kappaB binding activity in as much as no NF-kappaB bound to the main NF-kappaB-binding site 2 of the IL-10 promoter after addition of gp41. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 gp41 gp41 NUM CD NumType=Card _ _ _ _ 5 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 as as ADV RB _ _ _ _ _ 15 much much ADJ JJ Degree=Pos _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 no no DET DT _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 bound bound ADJ JJ Degree=Pos _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 main main ADJ JJ Degree=Pos _ _ _ _ 25 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappaB- kappab- NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 binding binding VERB VBG VerbForm=Ger _ _ _ _ 29 site site NOUN NN Number=Sing _ _ _ _ 30 2 2 NUM CD NumType=Card _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 10 10 NUM CD NumType=Card _ _ _ _ 36 promoter promoter NOUN NN Number=Sing _ _ _ _ 37 after after ADP IN _ _ _ _ _ 38 addition addition NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 gp41 gp41 NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 1079 # text = We also examined the involvement of other signal transduction pathways. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 involvement involvement NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 other other ADJ JJ Degree=Pos _ _ _ _ 8 signal signal NOUN NN Number=Sing _ _ _ _ 9 transduction transduction NOUN NN Number=Sing _ _ _ _ 10 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 1080 # text = Specific inhibitors of p70(S6)-kinase (rapamycin), and Gi protein (pertussis toxin), prevented induction of IL-10 production by gp41 in monocytes, while inhibitors of the phosphatidylinositol 3-kinase (PI 3-kinase) (wortmannin) and mitogen-activated protein kinase (MAPK) pathway (PD 98059) did not. 1 Specific specific ADJ JJ Degree=Pos _ _ _ _ 2 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p70 p70 NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 S6 s6 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 - - PUNCT : _ _ _ _ SpaceAfter=No 9 kinase kinase NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 rapamycin rapamycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 Gi gi PROPN NNP Number=Sing _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 pertussis pertussis NOUN NN Number=Sing _ _ _ _ 19 toxin toxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 induction induction NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 10 10 NUM CD NumType=Card _ _ _ _ 28 production production NOUN NN Number=Sing _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 gp41 gp41 NUM CD NumType=Card _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 while while SCONJ IN _ _ _ _ _ 35 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 phosphatidylinositol phosphatidylinositol NOUN NN Number=Sing _ _ _ _ 39 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 - - PUNCT : _ _ _ _ SpaceAfter=No 41 kinase kinase NOUN NN Number=Sing _ _ _ _ 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 PI Pi NUM CD NumType=Card _ _ _ _ 44 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 - - PUNCT : _ _ _ _ SpaceAfter=No 46 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 ) ) PUNCT -RRB- _ _ _ _ _ 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 wortmannin wortmannin NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 mitogen mitogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 54 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 55 protein protein NOUN NN Number=Sing _ _ _ _ 56 kinase kinase NOUN NN Number=Sing _ _ _ _ 57 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 58 MAPK MAPK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 59 ) ) PUNCT -RRB- _ _ _ _ _ 60 pathway pathway NOUN NN Number=Sing _ _ _ _ 61 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 62 PD P NOUN NN Number=Sing _ _ _ _ 63 98059 98059 NUM CD NumType=Card _ _ _ SpaceAfter=No 64 ) ) PUNCT -RRB- _ _ _ _ _ 65 did do VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 66 not not PART RB _ _ _ _ SpaceAfter=No 67 . . PUNCT . _ _ _ _ _ # sent_id = 1081 # text = Thus HIV-1 gp41-induced IL-10 up-regulation in monocytes may not involve NF-kappaB, MAPK, or PI 3-kinase activation, but rather may operate through activation of adenylate cyclase and pertussis-toxin-sensitive Gi/Go protein to effect p70(S6)-kinase activation. 1 Thus thus PROPN NNP Number=Sing _ _ _ _ 2 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 gp41 gp41 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 -induced -induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 10 10 NUM CD NumType=Card _ _ _ _ 10 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 regulation regulation NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 15 may may AUX MD VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 involve involve VERB VB VerbForm=Inf _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 MAPK MAPK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 PI PI PROPN NNP Number=Sing _ _ _ _ 26 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kinase kinase NOUN NN Number=Sing _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 but but CCONJ CC _ _ _ _ _ 32 rather rather ADV RB _ _ _ _ _ 33 may may AUX MD VerbForm=Fin _ _ _ _ 34 operate operate VERB VB VerbForm=Inf _ _ _ _ 35 through through ADP IN _ _ _ _ _ 36 activation activation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 adenylate adenylate ADJ JJ Degree=Pos _ _ _ _ 39 cyclase cyclase NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 pertussis- pertussis- SYM NFP _ _ _ _ SpaceAfter=No 42 toxin toxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 45 Gi gi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 / / PUNCT , _ _ _ _ SpaceAfter=No 47 Go go PROPN NNP Number=Sing _ _ _ _ 48 protein protein NOUN NN Number=Sing _ _ _ _ 49 to to ADP IN _ _ _ _ _ 50 effect effect NOUN NN Number=Sing _ _ _ _ 51 p70 p70 NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 53 S6 S6 NUM CD NumType=Card _ _ _ SpaceAfter=No 54 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 55 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 56 kinase kinase NOUN NN Number=Sing _ _ _ _ 57 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1082 # text = Document 003002383 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002383 003002383 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1083 # text = Role of IKK1 and IKK2 in lipopolysaccharide signaling in human monocytic cells. 1 Role role NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 IKK1 IKK1 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 IKK2 IKK2 NUM CD NumType=Card _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 8 signaling signaling NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1084 # text = Mononuclear phagocytes play a major role in immune and inflammatory responses. 1 Mononuclear Mononuclear ADJ JJ Degree=Pos _ _ _ _ 2 phagocytes phagocyte NOUN NNS Number=Plur _ _ _ _ 3 play play VERB VB VerbForm=Inf _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 major major ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 immune immune ADJ JJ Degree=Pos _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 11 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 1085 # text = Bacterial lipopolysaccharide (LPS) induces monocytes to express a variety of genes by activating the NF-kappaB/Rel transcription factor family. 1 Bacterial Bacterial ADJ JJ Degree=Pos _ _ _ _ 2 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 express express VERB VB VerbForm=Inf _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 variety variety NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 by by SCONJ IN _ _ _ _ _ 15 activating activat VERB VBG VerbForm=Ger _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 21 Rel Rel PROPN NNP Number=Sing _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ _ 24 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1086 # text = Recently, we have reported that the tumor necrosis factor and interleukin 1 signaling pathways activate two kinases, IKK1 and IKK2. 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 reported report VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 tumor tumor NOUN NN Number=Sing _ _ _ _ 9 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 interleukin interleukin ADJ JJ Degree=Pos _ _ _ _ 13 1 1 NUM CD NumType=Card _ _ _ _ 14 signaling signaling NOUN NN Number=Sing _ _ _ _ 15 pathways pathway NOUN NNS Number=Plur _ _ _ _ 16 activate activate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 two two NUM CD NumType=Card _ _ _ _ 18 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 IKK1 IKK1 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 IKK2 IKK2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1087 # text = Phosphorylation of the IkappaB cytoplasmic inhibitors, IkappaBalpha, IkappaBbeta, and IkappaBepsilon, by these kinases triggers proteolytic degradation and the release of NF-kappaB/Rel proteins into the nucleus. 1 Phosphorylation Phosphorylation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ _ 5 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 6 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 IkappaBbeta IkappaBbeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 IkappaBepsilon IkappaBepsilon PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 17 kinases kinase NOUN NNS Number=Plur _ _ _ _ 18 triggers trigger NOUN NNS Number=Plur _ _ _ _ 19 proteolytic proteolytic ADJ JJ Degree=Pos _ _ _ _ 20 degradation degradation NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 release release NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 / / PUNCT , _ _ _ _ SpaceAfter=No 29 Rel Rel PROPN NNP Number=Sing _ _ _ _ 30 proteins protein VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 into into ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1088 # text = At present, the role of the IKKs in LPS signaling has not been investigated. 1 At at ADP IN _ _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 IKKs IKKs PROPN NNPS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 LPS LPS PROPN NNP Number=Sing _ _ _ _ 11 signaling signaling NOUN NN Number=Sing _ _ _ _ 12 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 15 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 1089 # text = Here, we report that LPS induces IKK activity in human monocytes and THP-1 monocytic cells. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 LPS LPS PROPN NNP Number=Sing _ _ _ _ 7 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 IKK Ikk NUM CD NumType=Card _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1090 # text = The kinetics of activation of kinase activity in monocytic cells are relatively slow with maximal activity observed at 60 min, which coincides with the degradation of IkappaBs and the nuclear translocation of NF-kappaB. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 kinase kinase NOUN NN Number=Sing _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 relatively relatively ADV RB _ _ _ _ _ 13 slow slow ADJ JJ Degree=Pos _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 at at ADP IN _ _ _ _ _ 19 60 60 NUM CD NumType=Card _ _ _ _ 20 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 coincides coincide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 degradation degradation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 IkappaBs IkappaB NOUN NNS Number=Plur _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 32 translocation translocation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 1091 # text = In transfection experiments, overexpression of wild type IKK1, a dominant negative mutant IKK1 (K44M), or wild type IKK2 did not affect LPS-induced kappaB-dependent transcription in monocytic cells. 1 In in ADP IN _ _ _ _ _ 2 transfection transfection NOUN NN Number=Sing _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 wild wild NOUN NN Number=Sing _ _ _ _ 8 type type NOUN NN Number=Sing _ _ _ _ 9 IKK1 Ikk1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 13 negative negative ADJ JJ Degree=Pos _ _ _ _ 14 mutant mutant NOUN NN Number=Sing _ _ _ _ 15 IKK1 Ikk1 PROPN NNP Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 K44 K44 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 or or CCONJ CC _ _ _ _ _ 22 wild wild AUX MD VerbForm=Fin _ _ _ _ 23 type type VERB VB VerbForm=Inf _ _ _ _ 24 IKK2 IKK2 NUM CD NumType=Card _ _ _ _ 25 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 not not PART RB _ _ _ _ _ 27 affect affect VERB VB VerbForm=Inf _ _ _ _ 28 LPS Lps ADV RB _ _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 kappaB kappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 1092 # text = In contrast, a dominant negative mutant of IKK2 inhibited LPS induction of kappaB-dependent transcription in a dose-dependent manner. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 6 negative negative ADJ JJ Degree=Pos _ _ _ _ 7 mutant mutant NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 IKK2 IKK2 NUM CD NumType=Card _ _ _ _ 10 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 23 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1093 # text = These results indicate that LPS induction of kappaB-dependent gene expression in human monocytic cells requires activation of IKK2. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 LPS LPS PROPN NNP Number=Sing _ _ _ _ 6 induction induction NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 IKK2 IKK2 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1094 # text = Document 003002388 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002388 003002388 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1095 # text = GABP factors bind to a distal interleukin 2 (IL-2) enhancer and contribute to c-Raf-mediated increase in IL-2 induction. 1 GABP GABp SYM NFP _ _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 distal distal ADJ JJ Degree=Pos _ _ _ _ 7 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 8 2 2 NUM CD NumType=Card _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 contribute contribute NOUN NN Number=Sing _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 Raf Raf NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 increase increase NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ _ 28 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1096 # text = Triggering of the T-cell receptor-CD3 complex activates two major signal cascades in T lymphocytes, (i) Ca2+-dependent signal cascades and (ii) protein kinase cascades. 1 Triggering Triggering ADP IN _ _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 9 complex complex NOUN NN Number=Sing _ _ _ _ 10 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 two two NUM CD NumType=Card _ _ _ _ 12 major major ADJ JJ Degree=Pos _ _ _ _ 13 signal signal NOUN NN Number=Sing _ _ _ _ 14 cascades cascade NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 i i X LS _ _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 Ca2+- Ca2+- SYM SYM _ _ _ _ SpaceAfter=No 23 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 24 signal signal NOUN NN Number=Sing _ _ _ _ 25 cascades cascade NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 ii ii X LS _ _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 protein protein NOUN NN Number=Sing _ _ _ _ 31 kinase kinase NOUN NN Number=Sing _ _ _ _ 32 cascades cascade NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1097 # text = Both signal cascades contribute to the induction of the interleukin 2 (IL-2) gene during T-cell activation. 1 Both both DET DT _ _ _ _ _ 2 signal signal NOUN NN Number=Sing _ _ _ _ 3 cascades cascade NOUN NNS Number=Plur _ _ _ _ 4 contribute contribute VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 induction induction NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 11 2 2 NUM CD NumType=Card _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 during during ADP IN _ _ _ _ _ 19 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1098 # text = Prominent protein kinase cascades are those that activate mitogen-activated protein (MAP) kinases. 1 Prominent prominent ADJ JJ Degree=Pos _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 kinase kinase NOUN NN Number=Sing _ _ _ _ 4 cascades cascade NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 activate activate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 mitogen mitogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 MAP map NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1099 # text = We show here that c-Raf, which is at the helm of the classic MAP-Erk cascade, contributes to IL-2 induction through a distal enhancer element spanning the nucleotides from positions -502 to -413 in front of the transcriptional start site of the IL-2 gene. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 c c NOUN NN Abbr=Yes|Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 which which PRON WDT PronType=Rel _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 at at ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 helm helm NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 classic classic ADJ JJ Degree=Pos _ _ _ _ 17 MAP map PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 Erk Erk PROPN NNP Number=Sing _ _ _ _ 20 cascade cascade NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 contributes contribute NOUN NNS Number=Plur _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ _ 27 induction induction NOUN NN Number=Sing _ _ _ _ 28 through through ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 distal distal ADJ JJ Degree=Pos _ _ _ _ 31 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 32 element element NOUN NN Number=Sing _ _ _ _ 33 spanning spann VERB VBG VerbForm=Ger _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 36 from from ADP IN _ _ _ _ _ 37 positions position NOUN NNS Number=Plur _ _ _ _ 38 - - PUNCT , _ _ _ _ SpaceAfter=No 39 502 502 NUM CD NumType=Card _ _ _ _ 40 to to ADP IN _ _ _ _ _ 41 - - SYM SYM _ _ _ _ SpaceAfter=No 42 413 413 NUM CD NumType=Card _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 front front NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 48 start start NOUN NN Number=Sing _ _ _ _ 49 site site NOUN NN Number=Sing _ _ _ _ 50 of of ADP IN _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 54 2 2 NUM CD NumType=Card _ _ _ _ 55 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 1100 # text = Induction of this distal IL-2 enhancer differs from induction of the proximal IL-2 promoter-enhancer, since it is induced by phorbol esters alone and independent from Ca2+ signals. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 distal distal ADJ JJ Degree=Pos _ _ _ _ 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 9 differs differ NOUN NNS Number=Plur _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 induction induction NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 15 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 since since SCONJ IN _ _ _ _ _ 23 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 28 esters ester NOUN NNS Number=Plur _ _ _ _ 29 alone alone ADJ JJ Degree=Pos _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 independent independent ADJ JJ Degree=Pos _ _ _ _ 32 from from ADP IN _ _ _ _ _ 33 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 + + SYM SYM _ _ _ _ _ 35 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 1101 # text = In DNA-protein binding studies, we detected the binding of transcription factors GABP alpha and -beta to a dyad symmetry element (DSE) of the distal enhancer, which is formed by palindromic binding sites of Ets-like factors. 1 In in ADP IN _ _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 binding binding VERB VBG VerbForm=Ger _ _ _ _ 6 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 9 detected detect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 binding binding NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factors factor NOUN NNS Number=Plur _ _ _ _ 15 GABP GABP PROPN NNP Number=Sing _ _ _ _ 16 alpha alpha PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 beta beta NOUN NN Number=Sing _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 dyad dyad NOUN NN Number=Sing _ _ _ _ 23 symmetry symmetry NOUN NN Number=Sing _ _ _ _ 24 element element NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 DSE DSE INTJ UH _ _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 distal distal ADJ JJ Degree=Pos _ _ _ _ 31 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 which which PRON WDT PronType=Rel _ _ _ _ 34 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 formed form VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 palindromic palindromic ADJ JJ Degree=Pos _ _ _ _ 38 binding binding VERB VBG VerbForm=Ger _ _ _ _ 39 sites site NOUN NNS Number=Plur _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 Ets Ets PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 like like ADJ JJ Degree=Pos _ _ _ _ 44 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 1102 # text = Introduction of point mutations suppressing GABP binding to the DSE interfered with the induction of the distal enhancer and the entire IL-2 promoter-enhancer, while overexpression of both GABP factors enhanced the IL-2 promoter-enhancer induction. 1 Introduction introduction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 point point NOUN NN Number=Sing _ _ _ _ 4 mutations mutation NOUN NNS Number=Plur _ _ _ _ 5 suppressing suppresse VERB VBG VerbForm=Ger _ _ _ _ 6 GABP GABP PROPN NNP Number=Sing _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 DSE DSE PROPN NNP Number=Sing _ _ _ _ 11 interfered interfer VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 induction induction NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 distal distal ADJ JJ Degree=Pos _ _ _ _ 18 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 entire entire ADJ JJ Degree=Pos _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 while while SCONJ IN _ _ _ _ _ 30 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 both both DET DT _ _ _ _ _ 33 GABP GABP NOUN NN Number=Sing _ _ _ _ 34 factors factor NOUN NNS Number=Plur _ _ _ _ 35 enhanced enhance VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 2 2 NUM CD NumType=Card _ _ _ _ 40 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 43 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 1103 # text = Overexpression of BXB, a constitutive active version of c-Raf, and of further members of the Ras-Raf-Erk signal cascade exerted an increase of GABP-mediated promoter-enhancer induction. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 BXB BXB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 7 active active ADJ JJ Degree=Pos _ _ _ _ 8 version version NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 Raf Raf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 further further ADJ JJ Degree=Pos _ _ _ _ 17 members member NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 Ras Ras PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 Erk Erk PROPN NNP Number=Sing _ _ _ _ 25 signal signal NOUN NN Number=Sing _ _ _ _ 26 cascade cascade NOUN NN Number=Sing _ _ _ _ 27 exerted exert VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 increase increase NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 GABP GABP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 37 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 1104 # text = In conjunction with previously published data on c-Raf-induced phosphorylation of GABP factors (E.Flory, A. 1 In in ADP IN _ _ _ _ _ 2 conjunction conjunction NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 previously previously ADV RB _ _ _ _ _ 5 published publish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 data data NOUN NN Number=Sing _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 Raf Raf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 GABP GABP PROPN NNP Number=Sing _ _ _ _ 16 factors factor NOUN NNS Number=Plur _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 E.Flory E.Flory PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 A A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1105 # text = Hoffmeyer, U.Smola, U.R.Rapp, and J.T.Bruder, J.Virol.70:2260- 2268, 1996), these results indicate a contribution of GABP factors to the Raf-mediated enhancement of IL-2 induction during T-cell activation. 1 Hoffmeyer Hoffmeyer PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 U.Smola U.Smola PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 U.R.Rapp U.R.Rapp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 J.T.Bruder J.T.Bruder PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 J.Virol J.Virol PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 .70:2260 .70:2260 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - SYM SYM _ _ _ _ _ 13 2268 2268 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 1996 1996 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 19 results result NOUN NNS Number=Plur _ _ _ _ 20 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 contribution contribution NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 GABP Gabp NOUN NN Number=Sing _ _ _ _ 25 factors factor NOUN NNS Number=Plur _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 2 2 NUM CD NumType=Card _ _ _ _ 36 induction induction NOUN NN Number=Sing _ _ _ _ 37 during during ADP IN _ _ _ _ _ 38 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1106 # text = Document 003002389 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002389 003002389 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1107 # text = Characterization of a cofactor that regulates dimerization of a mammalian homeodomain protein. 1 Characterization Characterization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 cofactor cofactor NOUN NN Number=Sing _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 dimerization dimerization NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 11 homeodomain homeodomain NOUN NN Number=Sing _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1108 # text = Dimerization among transcription factors has become a recurrent theme in the regulation of eukaryotic gene expression. 1 Dimerization Dimerization NOUN NN Number=Sing _ _ _ _ 2 among among ADP IN _ _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factors factor NOUN NNS Number=Plur _ _ _ _ 5 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 become become VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 recurrent recurrent ADJ JJ Degree=Pos _ _ _ _ 9 theme theme NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 regulation regulation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 eukaryotic eukaryotic ADJ JJ Degree=Pos _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1109 # text = Hepatocyte nuclear factor-1 alpha (HNF-1 alpha) is a homeodomain-containing protein that functions as a dimer. 1 Hepatocyte Hepatocyte ADJ JJ Degree=Pos _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 HNF HNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 homeodomain homeodomain NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 containing contain VERB VBG VerbForm=Ger _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 functions function VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 as as ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 dimer dimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1110 # text = A dimerization cofactor of HNF-1 alpha (DCoH) was identified that displayed a restricted tissue distribution and did not bind to DNA, but, rather, selectively stabilized HNF-1 alpha dimers. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 dimerization dimerization NOUN NN Number=Sing _ _ _ _ 3 cofactor cofactor NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 HNF HNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 alpha alpha NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 DCoH DCoH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 displayed display VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 tissue tissue NOUN NN Number=Sing _ _ _ _ 19 distribution distribution NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 bind bind VERB VB VerbForm=Inf _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 DNA Dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 but but CCONJ CC _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 rather rather ADV RB _ _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 selectively selectively ADV RB _ _ _ _ _ 32 stabilized stabilize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 HNF HNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ _ 36 alpha alpha NOUN NN Number=Sing _ _ _ _ 37 dimers dimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 1111 # text = The formation of a stable tetrameric DCoH-HNF-1 alpha complex, which required the dimerization domain of HNF-1 alpha, did not change the DNA binding characteristics of HNF-1 alpha, but enhanced its transcriptional activity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 formation formation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 stable stable ADJ JJ Degree=Pos _ _ _ _ 6 tetrameric tetrameric NOUN NN Number=Sing _ _ _ _ 7 DCoH DCoH NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 HNF HNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 alpha alpha NOUN NN Number=Sing _ _ _ _ 13 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 required require VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 dimerization dimerization NOUN NN Number=Sing _ _ _ _ 19 domain domain NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 HNF HNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 not not PART RB _ _ _ _ _ 28 change change VERB VB VerbForm=Inf _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 DNA dna NOUN NN Number=Sing _ _ _ _ 31 binding bind VERB VBG VerbForm=Ger _ _ _ _ 32 characteristics characteristic NOUN NNS Number=Plur _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 HNF HNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ _ 37 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 but but CCONJ CC _ _ _ _ _ 40 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 42 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 43 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 1112 # text = However, DCoH did not confer transcriptional activation to the GAL4 DNA binding domain. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 DCoH DCoH PROPN NNP Number=Sing _ _ _ _ 4 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 confer confer VERB VB VerbForm=Inf _ _ _ _ 7 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 GAL4 Gal4 NOUN NN Number=Sing _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 1113 # text = These results indicate that DCoH regulates formation of transcriptionally active tetrameric complexes and may contribute to the developmental specificity of the complex. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 DCoH DCoH PROPN NNP Number=Sing _ _ _ _ 6 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 formation formation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 transcriptionally transcriptionally ADV RB _ _ _ _ _ 10 active active ADJ JJ Degree=Pos _ _ _ _ 11 tetrameric tetrameric ADJ JJ Degree=Pos _ _ _ _ 12 complexes complex NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 19 specificity specificity NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1114 # text = Document 003002390 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002390 003002390 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1115 # text = Inhibitory effect of E3330, a novel quinone derivative able to suppress tumor necrosis factor-alpha generation, on activation of nuclear factor-kappa B. (2E)-3-[5-(2,3-Dimethoxy-6-methyl-1,4-benzoquinoyl)]-2-nonyl-2- propenoic acid (E3330), is a novel agent with hepatoprotective activity. 1 Inhibitory Inhibitory ADJ JJ Degree=Pos _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 E3330 E3330 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 novel novel NOUN NN Number=Sing _ _ _ _ 8 quinone quinone NOUN NN Number=Sing _ _ _ _ 9 derivative derivative NOUN NN Number=Sing _ _ _ _ 10 able able ADJ JJ Degree=Pos _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 13 tumor tumor NOUN NN Number=Sing _ _ _ _ 14 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 alpha alpha NOUN NN Number=Sing _ _ _ _ 18 generation generation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 on on ADP IN _ _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 24 factor-kappa factor-kappa NOUN NN Number=Sing _ _ _ _ 25 B. B. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 2E 2E PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 - - PUNCT : _ _ _ _ SpaceAfter=No 30 3-[ 3-[ PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 5-( 5-( SYM NFP _ _ _ _ SpaceAfter=No 32 2,3-Dimethoxy-6-methyl-1,4-benzoquinoyl)]-2-nonyl-2 2,3-Dimethoxy-6-methyl-1,4-benzoquinoyl)]-2-nonyl-2 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 - - SYM SYM _ _ _ _ _ 34 propenoic propenoic ADJ JJ Degree=Pos _ _ _ _ 35 acid acid NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 E3330 E3330 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 41 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 novel novel NOUN NN Number=Sing _ _ _ _ 43 agent agent NOUN NN Number=Sing _ _ _ _ 44 with with ADP IN _ _ _ _ _ 45 hepatoprotective hepatoprotective ADJ JJ Degree=Pos _ _ _ _ 46 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 1116 # text = We report the effect of E3330 on transcriptional activation of tumor necrosis factor (TNF)-alpha gene and on nuclear factor (NF)-kappa B activation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effect effect NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 E3330 E3330 NUM CD NumType=Card _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 tumor tumor NOUN NN Number=Sing _ _ _ _ 12 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 alpha alpha NOUN NN Number=Sing _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 on on ADP IN _ _ _ _ _ 22 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1117 # text = Nuclear run-on experiments showed that E3330 decreases transcriptional activation of TNF-alpha gene induced by lipopolysaccharide (LPS) stimulation in human peripheral monocytes. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 run run VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 on on ADP IN _ _ _ _ _ 5 experiments experiment NOUN NNS Number=Plur _ _ _ _ 6 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 E3330 E3330 PROPN NNP Number=Sing _ _ _ _ 9 decreases decrease VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 alpha alpha NOUN NN Number=Sing _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 27 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1118 # text = To investigate the inhibitory mechanisms, we constructed a secreted-type placental alkaline phosphatase (PLAP) reporter gene whose transcription is controlled by a 1.4-kb human TNF-alpha promoter. 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 5 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 8 constructed construct VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 secreted secret VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 type type NOUN NN Number=Sing _ _ _ _ 13 placental placental NOUN NN Number=Sing _ _ _ _ 14 alkaline alkaline NOUN NN Number=Sing _ _ _ _ 15 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 PLAP PLAP NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 reporter reporter NOUN NN Number=Sing _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 controlled controll VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 1.4 1.4 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kb kb NOUN NN Number=Sing _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 alpha alpha NOUN NN Number=Sing _ _ _ _ 34 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1119 # text = A stable transformant of the PLAP reporter gene derived from human monocytic cell line showed very little activity on the promoter before stimulation, whereas LPS stimulation led to a dramatic increase in PLAP activity. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 stable stable ADJ JJ Degree=Pos _ _ _ _ 3 transformant transformant NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 PLAP PLAP PROPN NNP Number=Sing _ _ _ _ 7 reporter reporter NOUN NN Number=Sing _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 line line NOUN NN Number=Sing _ _ _ _ 15 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 very very ADV RB _ _ _ _ _ 17 little little ADJ JJ Degree=Pos _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 before before ADP IN _ _ _ _ _ 23 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 whereas whereas SCONJ IN _ _ _ _ _ 26 LPS LPS PROPN NNP Number=Sing _ _ _ _ 27 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 28 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 dramatic dramatic ADJ JJ Degree=Pos _ _ _ _ 32 increase increase NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 PLAP Plap NOUN NN Number=Sing _ _ _ _ 35 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 1120 # text = E3330 inhibited this induced promoter activity in a dose-dependent manner. 1 E3330 E3330 PROPN NNP Number=Sing _ _ _ _ 2 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 1121 # text = There are four putative NF-kappa B binding sites (kappa B-1, kappa B-2, kappa B-3, kappa B-4) in human TNF-alpha promoter. 1 There there PRON EX _ _ _ _ _ 2 are be VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 four four NUM CD NumType=Card _ _ _ _ 4 putative putative ADJ JJ Degree=Pos _ _ _ _ 5 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 sites site NOUN NNS Number=Plur _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 kappa kappa NOUN NN Number=Sing _ _ _ _ 23 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 human human ADJ JJ Degree=Pos _ _ _ _ 34 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 alpha alpha NOUN NN Number=Sing _ _ _ _ 37 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 1122 # text = By using mutated promoter-PLAP plasmids, we established that these NF-kappa B sites were necessary for induction of TNF-alpha transcription on stimulation with LPS. 1 By by SCONJ IN _ _ _ _ _ 2 using use VERB VBG VerbForm=Ger _ _ _ _ 3 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 PLAP pLAp NOUN NN Number=Sing _ _ _ _ 7 plasmids plasmid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 10 established establish VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 13 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 sites site NOUN NNS Number=Plur _ _ _ _ 18 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 induction induction NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 alpha alpha NOUN NN Number=Sing _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 on on ADP IN _ _ _ _ _ 28 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1123 # text = A gel retardation experiment with synthetic double-stranded oligonucleotides showed that activated NF-kappa B consisting of p50/p65 heterodimer bound to all four putative NF-kappa B DNA probes, suggesting that all four putative NF-kappa B recognition sites play an important role in inducible TNF-alpha expression. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 gel gel NOUN NN Number=Sing _ _ _ _ 3 retardation retardation NOUN NN Number=Sing _ _ _ _ 4 experiment experiment NOUN NN Number=Sing _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 7 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 stranded strand VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 11 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 consisting consisting VERB VBG VerbForm=Ger _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 p65 p65 NUM CD NumType=Card _ _ _ _ 23 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 24 bound bound ADJ JJ Degree=Pos _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 all all DET DT _ _ _ _ _ 27 four four NUM CD NumType=Card _ _ _ _ 28 putative putative ADJ JJ Degree=Pos _ _ _ _ 29 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappa kappa NOUN NN Number=Sing _ _ _ _ 32 B b NOUN NN Number=Sing _ _ _ _ 33 DNA dna NOUN NN Number=Sing _ _ _ _ 34 probes probe NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 37 that that SCONJ IN _ _ _ _ _ 38 all all DET DT _ _ _ _ _ 39 four four NUM CD NumType=Card _ _ _ _ 40 putative putative ADJ JJ Degree=Pos _ _ _ _ 41 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 kappa kappa NOUN NN Number=Sing _ _ _ _ 44 B b NOUN NN Number=Sing _ _ _ _ 45 recognition recognition NOUN NN Number=Sing _ _ _ _ 46 sites site NOUN NNS Number=Plur _ _ _ _ 47 play play VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 48 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 49 important important ADJ JJ Degree=Pos _ _ _ _ 50 role role NOUN NN Number=Sing _ _ _ _ 51 in in ADP IN _ _ _ _ _ 52 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 53 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 alpha alpha NOUN NN Number=Sing _ _ _ _ 56 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 1124 # text = E3330 decreased activated NF-kappa B in nuclei, suggesting that E3330 inhibits NF-kappa B activation and/or translocation of the nuclei. 1 E3330 E3330 PROPN NNP Number=Sing _ _ _ _ 2 decreased decrease VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 nuclei nuclei NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 E3330 E3330 PROPN NNP Number=Sing _ _ _ _ 14 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 or or CCONJ CC _ _ _ _ _ 23 translocation translocation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 nuclei nuclei NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1125 # text = Western blotting analysis with anti-I kappa B-alpha antibody indicated that E3330 inhibited degradation of I kappa B-alpha, which is an inhibitory protein of NF-kappa B, in LPS-stimulated monocytes. 1 Western western ADJ JJ Degree=Pos _ _ _ _ 2 blotting blott NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 anti anti X AFX _ _ _ _ SpaceAfter=No 6 -I -i X AFX _ _ _ _ _ 7 kappa kappa X FW Foreign=Yes _ _ _ _ 8 B- B- X GW _ _ _ _ SpaceAfter=No 9 alpha alpha X FW Foreign=Yes _ _ _ _ 10 antibody antibody PRON NN Number=Sing _ _ _ _ 11 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 E3330 E3330 PROPN NNP Number=Sing _ _ _ _ 14 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 degradation degradation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B- B- PUNCT , _ _ _ _ SpaceAfter=No 20 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappa kappa PROPN NNP Number=Sing _ _ _ _ 31 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 1126 # text = E3330 may suppress the production of active oxygen species serving as common messengers to activate NF-kappa B. 1 E3330 E3330 PROPN NNP Number=Sing _ _ _ _ 2 may may AUX MD VerbForm=Fin _ _ _ _ 3 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 production production NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 active active ADJ JJ Degree=Pos _ _ _ _ 8 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 9 species species NOUN NNS Number=Plur _ _ _ _ 10 serving serve VERB VBG VerbForm=Ger _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 common common ADJ JJ Degree=Pos _ _ _ _ 13 messengers messenger NOUN NNS Number=Plur _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 activate activate VERB VB VerbForm=Inf _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B. B. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1127 # text = Document 003002392 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002392 003002392 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1128 # text = Activation of the interleukin 6 gene by Mycobacterium tuberculosis or lipopolysaccharide is mediated by nuclear factors NF-IL6 and NF-kappa B [published erratum appears in Proc Natl Acad Sci U S A 1995 Apr 11;92(8):3632] 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 interleukin interleukin ADJ JJ Degree=Pos _ _ _ _ 5 6 6 NUM CD NumType=Card _ _ _ _ 6 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 Mycobacterium Mycobacterium PROPN NNP Number=Sing _ _ _ _ 9 tuberculosis tuberculosis NOUN NN Number=Sing _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 factors factor NOUN NNS Number=Plur _ _ _ _ 17 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 IL6 IL6 PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa PROPN NNP Number=Sing _ _ _ _ 24 B b PROPN NNP Number=Sing _ _ _ _ 25 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 published publish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 erratum erratum NOUN NN Number=Sing _ _ _ _ 28 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 Proc Proc PROPN NNP Number=Sing _ _ _ _ 31 Natl Natl PROPN NNP Number=Sing _ _ _ _ 32 Acad Acad PROPN NNP Number=Sing _ _ _ _ 33 Sci sci PROPN NNP Number=Sing _ _ _ _ 34 U U PROPN NNP Number=Sing _ _ _ _ 35 S be PART POS _ _ _ _ _ 36 A a PROPN NNP Number=Sing _ _ _ _ 37 1995 1995 NUM CD NumType=Card _ _ _ _ 38 Apr Apr PROPN NNP Number=Sing _ _ _ _ 39 11;92 11;92 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 8):3632 8):3632 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 1129 # text = The host response to Mycobacterium tuberculosis includes granuloma formation at sites of infection and systemic symptoms. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 host host NOUN NN Number=Sing _ _ _ _ 3 response response NOUN NN Number=Sing _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 Mycobacterium Mycobacterium PROPN NNP Number=Sing _ _ _ _ 6 tuberculosis tuberculosis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 7 includes include VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 granuloma granuloma NOUN NN Number=Sing _ _ _ _ 9 formation formation NOUN NN Number=Sing _ _ _ _ 10 at at ADP IN _ _ _ _ _ 11 sites site NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 infection infection NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 systemic systemic ADJ JJ Degree=Pos _ _ _ _ 16 symptoms symptom NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1130 # text = Cytokines have been identified by immunohistochemistry in granulomas in animal models of bacillus Calmette-Guerin (BCG) infection and are released by mononuclear phagocytes upon stimulation by mycobacterial proteins. 1 Cytokines Cytokine NOUN NNS Number=Plur _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 4 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 immunohistochemistry immunohistochemistry NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 granulomas granuloma NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 animal animal NOUN NN Number=Sing _ _ _ _ 11 models model NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 bacillus bacillus ADJ JJ Degree=Pos _ _ _ _ 14 Calmette Calmette PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 Guerin Guerin PROPN NNP Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 BCG BCG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 infection infection NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 released release VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 26 phagocytes phagocyte NOUN NNS Number=Plur _ _ _ _ 27 upon upon ADP IN _ _ _ _ _ 28 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 mycobacterial mycobacterial ADJ JJ Degree=Pos _ _ _ _ 31 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1131 # text = In this regard, the cytokine interleukin 6 (IL-6) may play a role in the clinical manifestations and pathological events of tuberculosis infection. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 regard regard NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 7 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 8 6 6 NUM CD NumType=Card _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 play play VERB VB VerbForm=Inf _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 role role NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 21 manifestations manifestation NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 pathological pathological ADJ JJ Degree=Pos _ _ _ _ 24 events event NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 tuberculosis tuberculosis DET DT Number=Sing|PronType=Dem _ _ _ _ 27 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1132 # text = We have demonstrated that lipoarabinomannan (LAM) from the mycobacterial cell wall, which was virtually devoid of lipopolysaccharide (LPS), stimulated mononuclear phagocytes to release IL-6 in a dose-response manner. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 lipoarabinomannan lipoarabinomannan NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 LAM LAm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 mycobacterial mycobacterial ADJ JJ Degree=Pos _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 wall wall NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 virtually virtually ADV RB _ _ _ _ _ 18 devoid devoid ADJ JJ Degree=Pos _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 27 phagocytes phagocyte NOUN NNS Number=Plur _ _ _ _ 28 to to PART TO _ _ _ _ _ 29 release release VERB VB VerbForm=Inf _ _ _ _ 30 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 6 6 NUM CD NumType=Card _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 response response NOUN NN Number=Sing _ _ _ _ 38 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 1133 # text = LAM and LPS were potent inducers of IL-6 gene expression in peripheral blood monocytes. 1 LAM LAM PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 LPS LPS PROPN NNP Number=Sing _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 potent potent ADJ JJ Degree=Pos _ _ _ _ 6 inducers inducer NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 6 6 NUM CD NumType=Card _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 15 blood blood NOUN NN Number=Sing _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1134 # text = Both LAM- and LPS-inducible IL-6 promoter activity was localized to a DNA fragment, positions -158 to -49, by deletion analysis and chloramphenicol acetyltransferase assay. 1 Both both DET DT _ _ _ _ _ 2 LAM LAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 LPS Lps PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 8 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 6 6 NUM CD NumType=Card _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 localized localize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 DNA dna NOUN NN Number=Sing _ _ _ _ 18 fragment fragment NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 positions position NOUN NNS Number=Plur _ _ _ _ 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 158 158 NUM CD NumType=Card _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 - - SYM SYM _ _ _ _ SpaceAfter=No 25 49 49 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 deletion deletion NOUN NN Number=Sing _ _ _ _ 29 analysis analysis NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 32 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 33 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1135 # text = Two nuclear factor NF-IL6 (positions -153 to -145 and -83 to -75) and one nuclear factor NF-kappa B (positions -72 to -63) motifs are present within this fragment. 1 Two two NUM CD NumType=Card _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 positions position NOUN NNS Number=Plur _ _ _ _ 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 153 153 NUM CD NumType=Card _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 145 145 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 - - SYM SYM _ _ _ _ SpaceAfter=No 16 83 83 NUM CD NumType=Card _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 - - SYM SYM _ _ _ _ SpaceAfter=No 19 75 75 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 one one NUM CD NumType=Card _ _ _ _ 23 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 positions position NOUN NNS Number=Plur _ _ _ _ 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 72 72 NUM CD NumType=Card _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 - - SYM SYM _ _ _ _ SpaceAfter=No 35 63 63 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 motifs motif NOUN NNS Number=Plur _ _ _ _ 38 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 39 present present ADJ JJ Degree=Pos _ _ _ _ 40 within within ADP IN _ _ _ _ _ 41 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 42 fragment fragment NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 1136 # text = Site-directed mutagenesis of one or more of these motifs within the IL-6 promoter demonstrated that each has positive regulatory activity and that they could act in a function- and orientation-independent manner. 1 Site site ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 one one NUM CD NumType=Card _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 more more ADJ JJR Degree=Cmp _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 motifs motif NOUN NNS Number=Plur _ _ _ _ 12 within within ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 6 6 NUM CD NumType=Card _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 each each DET DT _ _ _ _ _ 21 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 positive positive ADJ JJ Degree=Pos _ _ _ _ 23 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 28 could could AUX MD VerbForm=Fin _ _ _ _ 29 act act VERB VB VerbForm=Inf _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 orientation orientation NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 independent independent ADJ JJ Degree=Pos _ _ _ _ 38 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 1137 # text = Deletion of all three elements abolished inducibility of IL-6 promoter activity by both LAM and LPS. 1 Deletion Deletion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 all all DET DT _ _ _ _ _ 4 three three NUM CD NumType=Card _ _ _ _ 5 elements element NOUN NNS Number=Plur _ _ _ _ 6 abolished abolish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 inducibility inducibility NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 6 6 NUM CD NumType=Card _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 both both CCONJ CC _ _ _ _ _ 16 LAM LAm PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 LPS Lp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1138 # text = We conclude that the NF-IL6 and NF-kappa B sites mediate IL-6 induction in response to both LPS and LAM, acting as bacterial or mycobacterial response elements. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 sites site NOUN NNS Number=Plur _ _ _ _ 14 mediate mediate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 6 6 NUM CD NumType=Card _ _ _ _ 18 induction induction NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 response response NOUN NN Number=Sing _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 both both DET DT _ _ _ _ _ 23 LPS Lp NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 LAM LAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 acting act VERB VBG VerbForm=Ger _ _ _ _ 28 as as ADP IN _ _ _ _ _ 29 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 mycobacterial mycobacterial ADJ JJ Degree=Pos _ _ _ _ 32 response response NOUN NN Number=Sing _ _ _ _ 33 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1139 # text = Document 003002394 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002394 003002394 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1140 # text = Homodimerization of the human interleukin 4 receptor alpha chain induces Cepsilon germline transcripts in B cells in the absence of the interleukin 2 receptor gamma chain. 1 Homodimerization Homodimerization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 6 4 4 NUM CD NumType=Card _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 alpha alpha NOUN NN Number=Sing _ _ _ _ 9 chain chain NOUN NN Number=Sing _ _ _ _ 10 induces induce NOUN NNS Number=Plur _ _ _ _ 11 Cepsilon Cepsilon ADP IN _ _ _ _ _ 12 germline germline NOUN NN Number=Sing _ _ _ _ 13 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 B b ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 absence absence NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 23 2 2 NUM CD NumType=Card _ _ _ _ 24 receptor receptor NOUN NN Number=Sing _ _ _ _ 25 gamma gamma NOUN NN Number=Sing _ _ _ _ 26 chain chain NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1141 # text = The cytokines interleukin (IL)-4 and IL-13 play a critical role in inducing Cepsilon germline transcripts and IgE isotype switching in human B cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 3 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 4 4 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 13 13 NUM CD NumType=Card _ _ _ _ 13 play play NOUN NN Number=Sing _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 critical critical ADJ JJ Degree=Pos _ _ _ _ 16 role role NOUN NN Number=Sing _ _ _ _ 17 in in SCONJ IN _ _ _ _ _ 18 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 19 Cepsilon Cepsilon PROPN NNP Number=Sing _ _ _ _ 20 germline germline NOUN NN Number=Sing _ _ _ _ 21 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 IgE Ige NOUN NN Number=Sing _ _ _ _ 24 isotype isotype NOUN NN Number=Sing _ _ _ _ 25 switching switch VERB VBG VerbForm=Ger _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 human human ADJ JJ Degree=Pos _ _ _ _ 28 B b ADJ JJ Degree=Pos _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1142 # text = The IL-4 receptor (IL-4R) in B cells is composed of two chains, the IL-4-binding IL-4Ralpha chain, which is shared with the IL-13R, and the IL-2Rgamma (gammac) chain, which is shared with IL-7R, IL-9R, and IL-15R. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 4 4 NUM CD NumType=Card _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 4R 4r PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 B b ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 two two NUM CD NumType=Card _ _ _ _ 18 chains chain NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 -binding -binding NOUN NN Number=Sing _ _ _ _ 25 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 Ralpha Ralpha PROPN NNP Number=Sing _ _ _ _ 29 chain chain NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 which which PRON WDT PronType=Rel _ _ _ _ 32 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 shared share VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 13R 13r NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 Rgamma Rgamma NOUN NN Number=Sing _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 gammac gammac NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ _ 49 chain chain NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 , , PUNCT , _ _ _ _ _ 51 which which PRON WDT PronType=Rel _ _ _ _ 52 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 53 shared share VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 54 with with ADP IN _ _ _ _ _ 55 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 56 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 57 7R 7R PROPN NNP Number=Sing _ _ _ SpaceAfter=No 58 , , PUNCT , _ _ _ _ _ 59 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 60 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 61 9R 9R PROPN NNP Number=Sing _ _ _ SpaceAfter=No 62 , , PUNCT , _ _ _ _ _ 63 and and CCONJ CC _ _ _ _ _ 64 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 65 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 66 15R. 15R. PROPN NNP Number=Sing _ _ _ _ # sent_id = 1143 # text = IL-4 induces Cepsilon germline transcripts and IgE isotype switching in B cells from patients with gammac chain deficiency. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ _ 4 induces induce NOUN NNS Number=Plur _ _ _ _ 5 Cepsilon Cepsilon PROPN NNP Number=Sing _ _ _ _ 6 germline germline VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 IgE IgE NOUN NN Number=Sing _ _ _ _ 10 isotype isotype NOUN NN Number=Sing _ _ _ _ 11 switching switching VERB VBG VerbForm=Ger _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 B b ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 patients patient NOUN NNS Number=Plur _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 gammac gammac NOUN NN Number=Sing _ _ _ _ 19 chain chain NOUN NN Number=Sing _ _ _ _ 20 deficiency deficiency NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1144 # text = Induction of Cepsilon germline transcripts by IL-4 in B cells that lack the gammac chain may involve signaling via the IL-13R. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Cepsilon Cepsilon PROPN NNP Number=Sing _ _ _ _ 4 germline germline NOUN NN Number=Sing _ _ _ _ 5 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 4 4 NUM CD NumType=Card _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 B b ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 lack lack VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 gammac gammac NOUN NN Number=Sing _ _ _ _ 17 chain chain NOUN NN Number=Sing _ _ _ _ 18 may may AUX MD VerbForm=Fin _ _ _ _ 19 involve involve VERB VB VerbForm=Inf _ _ _ _ 20 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 21 via via ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 13R 13R PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1145 # text = Alternatively, the IL-4Ralpha chain may transduce intracellular signals that lead to Cepsilon gene transcription independently of its association with other chains. 1 Alternatively Alternatively ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 Ralpha Ralpha NOUN NN Number=Sing _ _ _ _ 8 chain chain NOUN NN Number=Sing _ _ _ _ 9 may may AUX MD VerbForm=Fin _ _ _ _ 10 transduce transduce VERB VB VerbForm=Inf _ _ _ _ 11 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 12 signals signal NOUN NNS Number=Plur _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 lead lead VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 Cepsilon Cepsilon PROPN NNP Number=Sing _ _ _ _ 17 gene gene PROPN NNP Number=Sing _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 independently independently ADV RB _ _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 22 association association NOUN NN Number=Sing _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 other other ADJ JJ Degree=Pos _ _ _ _ 25 chains chain NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1146 # text = We show that ligand-induced homodimerization of chimeric surface receptors consisting of the extracellular and transmembrane domains of the erythropoietin receptor and of the intracellular domain of IL-4Ralpha induces Janus kinase 1 (Jak1) activation, STAT6 activation, and Cepsilon germline transcripts in human B cell line BJAB. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 homodimerization homodimerization NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 chimeric chimeric ADJ JJ Degree=Pos _ _ _ _ 10 surface surface NOUN NN Number=Sing _ _ _ _ 11 receptors receptor NOUN NNS Number=Plur _ _ _ _ 12 consisting consiste VERB VBG VerbForm=Ger _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 transmembrane transmembrane ADJ JJ Degree=Pos _ _ _ _ 18 domains domain NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 erythropoietin erythropoietin ADJ JJ Degree=Pos _ _ _ _ 22 receptor receptor NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 27 domain domain NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 Ralpha Ralpha PROPN NNP Number=Sing _ _ _ _ 33 induces induce PROPN NNPS Number=Plur _ _ _ _ 34 Janus Janus PROPN NNP Number=Sing _ _ _ _ 35 kinase kinase NOUN NN Number=Sing _ _ _ _ 36 1 1 NUM CD NumType=Card _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 Jak1 Jak1 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 STAT6 STAT6 NUM CD NumType=Card _ _ _ _ 43 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 Cepsilon Cepsilon PROPN NNP Number=Sing _ _ _ _ 47 germline germline NOUN NN Number=Sing _ _ _ _ 48 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 49 in in ADP IN _ _ _ _ _ 50 human human ADJ JJ Degree=Pos _ _ _ _ 51 B b NOUN NN Number=Sing _ _ _ _ 52 cell cell NOUN NN Number=Sing _ _ _ _ 53 line line NOUN NN Number=Sing _ _ _ _ 54 BJAB bJAb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 1147 # text = Disruption of the Jak1-binding proline-rich Box1 region of IL-4Ralpha abolished signaling by this chimeric receptor. 1 Disruption disruption NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 Jak1 Jak1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 proline proline NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 rich rich ADJ JJ Degree=Pos _ _ _ _ 10 Box1 box1 NOUN NN Number=Sing _ _ _ _ 11 region region NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 4 for NUM CD NumType=Card _ _ _ SpaceAfter=No 16 Ralpha Ralpha PROPN NNP Number=Sing _ _ _ _ 17 abolished abolish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 signaling signale VERB VBG VerbForm=Ger _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 21 chimeric chimeric ADJ JJ Degree=Pos _ _ _ _ 22 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1148 # text = Furthermore, B cells transfected with a chimeric CD8alpha/IL-4Ralpha receptor, which is expressed on the cell surface as a homodimer, constitutively expressed Cepsilon germline transcripts. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 B b ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 chimeric chimeric NOUN NN Number=Sing _ _ _ _ 9 CD8alpha/ Cd8alpha/ PUNCT HYPH _ _ _ _ SpaceAfter=No 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 Ralpha Ralpha PROPN NNP Number=Sing _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 surface surface NOUN NN Number=Sing _ _ _ _ 23 as as ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 homodimer homodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 constitutively constitutively ADV RB _ _ _ _ _ 28 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 Cepsilon Cepsilon PROPN NNP Number=Sing _ _ _ _ 30 germline germline NOUN NN Number=Sing _ _ _ _ 31 transcripts transcript NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1149 # text = These results suggest that homodimerization of the IL-4Ralpha chain is sufficient to transduce Jak1-dependent intracellular signals that lead to IgE isotype switching. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 homodimerization homodimerization NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 Ralpha Ralpha PROPN NNP Number=Sing _ _ _ _ 12 chain chain NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 transduce transduce VERB VB VerbForm=Inf _ _ _ _ 17 Jak1 Jak1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 20 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 21 signals signal NOUN NNS Number=Plur _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 lead lead VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 IgE Ige VERB VB VerbForm=Inf _ _ _ _ 26 isotype isotype NOUN NN Number=Sing _ _ _ _ 27 switching switch VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1150 # text = Document 003002395 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002395 003002395 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1151 # text = The class II trans-activator CIITA interacts with the TBP-associated factor TAFII32. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 class class NOUN NN Number=Sing _ _ _ _ 3 II ii NUM CD NumType=Card _ _ _ _ 4 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 -activator -activator NOUN NN Number=Sing _ _ _ _ 6 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 7 interacts interact VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 TBP Tbp NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 TAFII32 Tafii32 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1152 # text = The class II trans- activator (CIITA) is the main transcriptional co-activator for the expression of MHC class II proteins. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 class class NOUN NN Number=Sing _ _ _ _ 3 II ii NUM CD NumType=Card _ _ _ _ 4 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 - - PUNCT : _ _ _ _ _ 6 activator activator NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 main main ADJ JJ Degree=Pos _ _ _ _ 13 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 14 co-activator co-activator NOUN NN Number=Sing _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 MHC MHC PROPN NNP Number=Sing _ _ _ _ 20 class class NOUN NN Number=Sing _ _ _ _ 21 II ii NUM CD NumType=Card _ _ _ _ 22 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1153 # text = Its N-terminal 125 amino acids function as an independent transcriptional activation domain. 1 Its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 2 N- N- SYM NFP _ _ _ _ SpaceAfter=No 3 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 4 125 125 NUM CD NumType=Card _ _ _ _ 5 amino amino ADJ JJ Degree=Pos _ _ _ _ 6 acids acids NOUN NNS Number=Plur _ _ _ _ 7 function function NOUN NN Number=Sing _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 independent independent ADJ JJ Degree=Pos _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 1154 # text = Analyses of the primary amino acid sequence of the activation domain predict the presence of three alpha-helices, each with a high proportion of acidic residues. 1 Analyses analysis NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 primary primary ADJ JJ Degree=Pos _ _ _ _ 5 amino amino X GW _ _ _ _ _ 6 acid acid ADJ JJ Degree=Pos _ _ _ _ 7 sequence sequence NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 domain domain NOUN NN Number=Sing _ _ _ _ 12 predict predict VERB VB VerbForm=Inf _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 presence presence NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 three three NUM CD NumType=Card _ _ _ _ 17 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 helices helice NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 each each DET DT _ _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 high high ADJ JJ Degree=Pos _ _ _ _ 25 proportion proportion NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 acidic acidic ADJ JJ Degree=Pos _ _ _ _ 28 residues residue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1155 # text = Using site-directed mutagenesis, we found that two of these predicted alpha-helices are required for full transcriptional activation by CIITA. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 8 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 two two NUM CD NumType=Card _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 13 predicted predict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 helices helice NOUN NNS Number=Plur _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 full full ADJ JJ Degree=Pos _ _ _ _ 21 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1156 # text = Moreover, a CIITA protein in which both functional alpha-helices have been deleted displays a dominant negative phenotype. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 both both DET DT _ _ _ _ _ 9 functional functional ADJ JJ Degree=Pos _ _ _ _ 10 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 helices helice NOUN NNS Number=Plur _ _ _ _ 13 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 15 deleted delete VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 displays display VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 19 negative negative ADJ JJ Degree=Pos _ _ _ _ 20 phenotype phenotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1157 # text = This activation domain of CIITA interacts with the 32 kDa subunit of the general transcription complex TFIID, TAFII32. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 domain domain NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 6 interacts interact NOUN NNS Number=Plur _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 32 32 NUM CD NumType=Card _ _ _ _ 10 kDa kDa NOUN NN Number=Sing _ _ _ _ 11 subunit subunit NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 general general ADJ JJ Degree=Pos _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 complex complex NOUN NN Number=Sing _ _ _ _ 17 TFIID tFIId NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 TAFII32 TAFII32 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1158 # text = Decreased transcriptional activation by N-terminal deletions of CIITA is correlated directly with their reduced binding to TAFII32. 1 Decreased Decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 N- N- SYM NFP _ _ _ _ SpaceAfter=No 6 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 7 deletions deletion NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 correlated correlate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 directly directly ADV RB _ _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 TAFII32 Tafii32 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1159 # text = We conclude that interactions between TAFII32 and CIITA are responsible for activation of class II genes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 interactions interaction NOUN NNS Number=Plur _ _ _ _ 5 between between ADP IN _ _ _ _ _ 6 TAFII32 Tafii32 NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 CIITA CIITa NOUN NN Number=Sing _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 class class NOUN NN Number=Sing _ _ _ _ 15 II ii NUM CD NumType=Card _ _ _ _ 16 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1160 # text = Document 003002398 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002398 003002398 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1161 # text = Transcriptional regulation of the interleukin-2 gene in normal human peripheral blood T cells. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 normal normal ADJ JJ Degree=Pos _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 13 blood blood NOUN NN Number=Sing _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 1162 # text = Convergence of costimulatory signals and differences from transformed T cells. 1 Convergence Convergence NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 4 signals signal NOUN NNS Number=Plur _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 differences difference NOUN NNS Number=Plur _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1163 # text = To study transcriptional regulation in normal human T cells, we have optimized conditions for transient transfection. 1 To to PART TO _ _ _ _ _ 2 study study VERB VB VerbForm=Inf _ _ _ _ 3 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 normal normal ADJ JJ Degree=Pos _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 T t NOUN NN Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 12 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 optimized optimize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 conditions condition NOUN NNS Number=Plur _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 transient transient ADJ JJ Degree=Pos _ _ _ _ 17 transfection transfection NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1164 # text = Interleukin-2 (IL-2) promoter-reporter gene behavior closely parallels the endogenous gene in response to T cell receptor and costimulatory signals. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 reporter reporter NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 behavior behavior NOUN NN Number=Sing _ _ _ _ 14 closely closely ADV RB _ _ _ _ _ 15 parallels parallel VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 response response NOUN NN Number=Sing _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 T t VERB VB VerbForm=Inf _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 receptor receptor NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 27 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1165 # text = As assessed with mutagenized promoters, the most important IL-2 cis-regulatory elements in normal T cells are the proximal AP-1 site and the NF- kappaB site. 1 As as SCONJ IN _ _ _ _ _ 2 assessed assess VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 mutagenized mutagenize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 most most ADV RBS _ _ _ _ _ 9 important important ADJ JJ Degree=Pos _ _ _ _ 10 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 16 elements element NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 normal normal ADJ JJ Degree=Pos _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 24 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 site site NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ _ 32 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 33 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1166 # text = Both primary activation, with phytohemagglutinin or antibodies to CD3, and costimulation, provided by pairs of CD2 antibodies or B7-positive (B cells) or B7-negative (endothelial) accessory cells, are mediated through the same cis-elements. 1 Both both DET DT _ _ _ _ _ 2 primary primary ADJ JJ Degree=Pos _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 phytohemagglutinin phytohemagglutinin NOUN NN Number=Sing _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 costimulation costimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 provided provide VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 pairs pair NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 CD2 CD2 NOUN NN Number=Sing _ _ _ _ 20 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 21 or or CCONJ CC _ _ _ _ _ 22 B7 B7 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 positive positive ADJ JJ Degree=Pos _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 B b ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 or or CCONJ CC _ _ _ _ _ 30 B7 B7 NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 negative negative ADJ JJ Degree=Pos _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 endothelial endothelial ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 accessory accessory ADJ JJ Degree=Pos _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 40 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 41 through through ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 same same ADJ JJ Degree=Pos _ _ _ _ 44 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 1167 # text = Interestingly, the nuclear factor of activated T cell sites are much less important in normal T cells than in Jurkat T cells. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 sites site NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 much much ADV RB _ _ _ _ _ 13 less less ADV RBR Degree=Cmp _ _ _ _ 14 important important ADJ JJ Degree=Pos _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 normal normal ADJ JJ Degree=Pos _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 than than ADP IN _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1168 # text = We conclude that IL-2 transcriptional regulation differs in tumor cell lines compared with normal T cells and that different costimulatory signals converge on the same cis-elements in the IL-2 promoter. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 8 regulation regulation NOUN NN Number=Sing _ _ _ _ 9 differs differ NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 tumor tumor NOUN NN Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 lines line NOUN NNS Number=Plur _ _ _ _ 14 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 normal normal ADJ JJ Degree=Pos _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 21 different different ADJ JJ Degree=Pos _ _ _ _ 22 costimulatory costimulatory NOUN NN Number=Sing _ _ _ _ 23 signals signal NOUN NNS Number=Plur _ _ _ _ 24 converge converge NOUN NN Number=Sing _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 same same ADJ JJ Degree=Pos _ _ _ _ 28 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 elements element NOUN NNS Number=Plur _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 2 2 NUM CD NumType=Card _ _ _ _ 36 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1169 # text = Document 003002407 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002407 003002407 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1170 # text = IL-2-mediated cell cycle progression and inhibition of apoptosis does not require NF-kappa B or activating protein-1 activation in primary human T cells. 1 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 cycle cycle NOUN NN Number=Sing _ _ _ _ 8 progression progression NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 13 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 require require VERB VB VerbForm=Inf _ _ _ _ 16 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 activating activate VERB VBG VerbForm=Ger _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 primary primary ADJ JJ Degree=Pos _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 T t PROPN NNP Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1171 # text = The IL-2 growth hormone is the major growth factor of activated T lymphocytes during a developing immune response. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 growth growth NOUN NN Number=Sing _ _ _ _ 6 hormone hormone NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 major major ADJ JJ Degree=Pos _ _ _ _ 10 growth growth NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 during during ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 developing develop VERB VBG VerbForm=Ger _ _ _ _ 19 immune immune ADJ JJ Degree=Pos _ _ _ _ 20 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1172 # text = IL-2 is required not only for cell cycle progression but also to protect 1 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 not not ADV RB _ _ _ _ _ 7 only only ADV RB _ _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 cycle cycle NOUN NN Number=Sing _ _ _ _ 11 progression progression NOUN NN Number=Sing _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 also also ADV RB _ _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 protect protect VERB VB VerbForm=Inf _ _ _ _ # sent_id = 1173 # text = Ag-activated T cells from programmed cell death. 1 Ag- Ag- SYM NFP _ _ _ _ SpaceAfter=No 2 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 programmed program VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 1174 # text = In several cell types, activation of NF-kappa B and/or activating protein-1 (AP-1) has been demonstrated to be extremely important in blocking apoptosis. 1 In in ADP IN _ _ _ _ _ 2 several several ADJ JJ Degree=Pos _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ SpaceAfter=No 13 / / PUNCT , _ _ _ _ SpaceAfter=No 14 or or CCONJ CC _ _ _ _ _ 15 activating activate VERB VBG VerbForm=Ger _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 1 1 X LS _ _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 26 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 be be AUX VB VerbForm=Inf _ _ _ _ 29 extremely extremely ADV RB _ _ _ _ _ 30 important important ADJ JJ Degree=Pos _ _ _ _ 31 in in SCONJ IN _ _ _ _ _ 32 blocking block VERB VBG VerbForm=Ger _ _ _ _ 33 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1175 # text = To determine whether either or both of these transcription factors are involved in cell survival or cell cycle progression in response to IL-2, primary human T cells responsive to the growth factor were analyzed for NF-kappa B and AP-1 activation. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 either either DET DT _ _ _ _ _ 5 or or CCONJ CC _ _ _ _ _ 6 both both DET DT _ _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 involved involved ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 survival survival NOUN NN Number=Sing _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 cycle cycle NOUN NN Number=Sing _ _ _ _ 19 progression progression NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 response response NOUN NN Number=Sing _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 primary primary ADJ JJ Degree=Pos _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 T t NOUN NN Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 growth growth NOUN NN Number=Sing _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ _ 36 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 37 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 for for ADP IN _ _ _ _ _ 39 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT , _ _ _ _ SpaceAfter=No 41 kappa kappa NOUN NN Number=Sing _ _ _ _ 42 B b NOUN NN Number=Sing _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 1 1 NUM CD NumType=Card _ _ _ _ 47 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 1176 # text = The current study clearly demonstrates that IL-2 does not induce I kappa B alpha degradation or NF-kappa B activation in primary human T cells that respond to IL-2 by entering the cell cycle and avoiding apoptosis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 current current ADJ JJ Degree=Pos _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 clearly clearly ADV RB _ _ _ _ _ 5 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 induce induce VERB VB VerbForm=Inf _ _ _ _ 13 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 14 kappa kappa X FW Foreign=Yes _ _ _ _ 15 B b ADJ JJ Degree=Pos _ _ _ _ 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 degradation degradation NOUN NN Number=Sing _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa NOUN NN Number=Sing _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 primary primary ADJ JJ Degree=Pos _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 T t NOUN NN Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 that that PRON WDT PronType=Rel _ _ _ _ 30 respond respond VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 2 2 NUM CD NumType=Card _ _ _ _ 35 by by SCONJ IN _ _ _ _ _ 36 entering enter VERB VBG VerbForm=Ger _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 cycle cycle NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 avoiding avoid VERB VBG VerbForm=Ger _ _ _ _ 42 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 1177 # text = Similarly, IL-2 neither activates JNK nor increases AP-1 binding activity to a consensus o-tetradecanoylphorbol 13-acetate (TPA) response element. 1 Similarly similarly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 neither neither NOUN NN Number=Sing _ _ _ _ 7 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 JNK Jnk PROPN NNP Number=Sing _ _ _ _ 9 nor nor CCONJ CC _ _ _ _ _ 10 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 binding binding VERB VBG VerbForm=Ger _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 consensus consensus NOUN NN Number=Sing _ _ _ _ 19 o- o- PUNCT , _ _ _ _ SpaceAfter=No 20 tetradecanoylphorbol tetradecanoylphorbol NOUN NN Number=Sing _ _ _ _ 21 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT : _ _ _ _ SpaceAfter=No 23 acetate acetate NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 response response NOUN NN Number=Sing _ _ _ _ 28 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1178 # text = On the other hand, the growth factor does induce the activation of STAT3 and STAT5 in these cells, as has been previously demonstrated. 1 On on ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 hand hand NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 growth growth NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 induce induce VERB VB VerbForm=Inf _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 STAT3 STAT3 NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 STAT5 STAT5 NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 as as SCONJ IN _ _ _ _ _ 22 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 24 previously previously ADV RB _ _ _ _ _ 25 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1179 # text = These data show that neither NF-kappa B nor AP-1 activation is required for IL-2-mediated survival or cell cycle progression in activated primary human T cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 neither neither DET DT _ _ _ _ _ 6 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 nor nor CCONJ CC _ _ _ _ _ 11 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 survival survival NOUN NN Number=Sing _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 cycle cycle NOUN NN Number=Sing _ _ _ _ 27 progression progression NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 primary primary ADJ JJ Degree=Pos _ _ _ _ 31 human human ADJ JJ Degree=Pos _ _ _ _ 32 T t PROPN NNP Number=Sing _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1180 # text = Document 003002409 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002409 003002409 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1181 # text = Transcription factor 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ # sent_id = 1182 # text = NF-kappaB regulates inducible Oct-2 gene expression in precursor B lymphocytes. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 6 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 precursor precursor ADJ JJ Degree=Pos _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1183 # text = The POU transcription factors Oct-1 and Oct-2 regulate the activity of octamer-dependent promoters, including those that direct transcription from rearranged immunoglobulin genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 POU pou NOUN NN Number=Sing _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factors factor NOUN NNS Number=Plur _ _ _ _ 5 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 -1 -1 NUM CD NumType=Card _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 to NUM CD NumType=Card _ _ _ _ 11 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 octamer octamer ADV RB _ _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 18 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 including include VERB VBG VerbForm=Ger _ _ _ _ 21 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 22 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 23 direct direct ADJ JJ Degree=Pos _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 from from ADP IN _ _ _ _ _ 26 rearranged rearrange VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 28 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1184 # text = Unlike Oct-1, which is constitutively expressed in many cell types, Oct-2 expression is restricted primarily to B lymphocytes and can be induced in precursor B cells by stimulation with bacterial lipopolysaccharide (LPS). 1 Unlike unlike ADP IN _ _ _ _ _ 2 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 which which PRON WDT PronType=Rel _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 constitutively constitutively ADV RB _ _ _ _ _ 8 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 many many ADJ JJ Degree=Pos _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 restricted restrict VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 primarily primarily ADV RB _ _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 B b ADJ JJ Degree=Pos _ _ _ _ 23 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 can can AUX MD VerbForm=Fin _ _ _ _ 26 be be AUX VB VerbForm=Inf _ _ _ _ 27 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 precursor precursor ADJ JJ Degree=Pos _ _ _ _ 30 B b ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 36 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 LPS LPS INTJ UH _ _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1185 # text = However, the precise factors that mediate this induction mechanism remain unknown. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 precise precise ADJ JJ Degree=Pos _ _ _ _ 5 factors factor NOUN NNS Number=Plur _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 mediate mediate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 11 remain remain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 1186 # text = In the present study, we monitored Oct-2 expression in cells arrested for the activation of NF-kappaB, an LPS-responsive member of the Rel transcription factor family. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 monitored monitor VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 arrested arrest VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 LPS LPS ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 27 member member NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 Rel Rel PROPN NNP Number=Sing _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ _ 32 factor factor NOUN NN Number=Sing _ _ _ _ 33 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1187 # text = Despite stimulation with LPS, disruption of the NF-kappaB signaling pathway in precursor B cells led to the loss of inducible Oct-2 DNA binding activity in vitro and the suppression of Oct-2-directed transcription in vivo. 1 Despite despite ADP IN _ _ _ _ _ 2 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 disruption disruption NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 12 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 13 pathway pathway NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 precursor precursor ADJ JJ Degree=Pos _ _ _ _ 16 B b PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 loss loss NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 24 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ _ 27 DNA dna NOUN NN Number=Sing _ _ _ _ 28 binding binding VERB VBG VerbForm=Ger _ _ _ _ 29 activity activity NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 vitro vitro NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 suppression suppression NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 transcription transcription NOUN NN Number=Sing _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 1188 # text = This biochemical defect correlated with a specific block to Oct-2 gene expression at the level of transcription, whereas the expression of Oct-1 was unaffected. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 3 defect defect NOUN NN Number=Sing _ _ _ _ 4 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 block block NOUN NN Number=Sing _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 at at ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 level level NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 whereas whereas SCONJ IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 -1 -1 NUM CD NumType=Card _ _ _ _ 27 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 28 unaffected unaffected ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1189 # text = The finding that Oct-2 is under NF-kappaB control highlights an important cross-talk mechanism involving two distinct transcription factor families that regulate B lymphocyte function. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 finding finding NOUN NN Number=Sing _ _ _ _ 3 that that PRON WDT PronType=Rel _ _ _ _ 4 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 under under ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 12 control control NOUN NN Number=Sing _ _ _ _ 13 highlights highlight VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 important important ADJ JJ Degree=Pos _ _ _ _ 16 cross-talk cross-talk NOUN NN Number=Sing _ _ _ _ 17 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 18 involving involve VERB VBG VerbForm=Ger _ _ _ _ 19 two two NUM CD NumType=Card _ _ _ _ 20 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 families family NOUN NNS Number=Plur _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 B b ADJ JJ Degree=Pos _ _ _ _ 27 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 28 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1190 # text = Document 003002412 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002412 003002412 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1191 # text = Interleukin 10 induced c-fos expression in human B cells by activation of divergent protein kinases. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ _ 2 10 10 NUM CD NumType=Card _ _ _ _ 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 fos fos NOUN NNS Number=Plur _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 B b ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 divergent divergent ADJ JJ Degree=Pos _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1192 # text = IL-10 is a potent mediator of human B cell growth and plasma cell formation. 1 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 potent potent NOUN NN Number=Sing _ _ _ _ 7 mediator mediator NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 growth growth NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 plasma plasma NOUN NN Number=Sing _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 formation formation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1193 # text = However, signal transduction of IL-10 in B cells is poorly understood. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 signal signal VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 transduction transduction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 10 10 NUM CD NumType=Card _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 B b ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 poorly poorly ADV RB _ _ _ _ _ 14 understood understand VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 1194 # text = In this study the effect of IL-10 on the expression of the protooncogene c-fos was investigated, because Fos plays a potential role in the regulation of B cell proliferation and differentiation. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 10 10 NUM CD NumType=Card _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 protooncogene protooncogene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 fos fos NOUN NNS Number=Plur _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 because because SCONJ IN _ _ _ _ _ 23 Fos Fos PROPN NNP Number=Sing _ _ _ _ 24 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 potential potential ADJ JJ Degree=Pos _ _ _ _ 27 role role NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 regulation regulation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 B b ADJ JJ Degree=Pos _ _ _ _ 33 cell cell NOUN NN Number=Sing _ _ _ _ 34 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 1195 # text = B cells were purified from buffy coat preparations of healthy blood donors by positive selection using an anti CD20 monoclonal antibody and a MiniMACS separation unit. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 purified purify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 buffy buffy NOUN NN Number=Sing _ _ _ _ 7 coat coat NOUN NN Number=Sing _ _ _ _ 8 preparations preparation NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 11 blood blood NOUN NN Number=Sing _ _ _ _ 12 donors donor NOUN NNS Number=Plur _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 positive positive ADJ JJ Degree=Pos _ _ _ _ 15 selection selection NOUN NN Number=Sing _ _ _ _ 16 using use VERB VBG VerbForm=Ger _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 anti anti X AFX _ _ _ _ _ 19 CD20 CD20 PROPN NNP Number=Sing _ _ _ _ 20 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 21 antibody antibody NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 MiniMACS MiniMACS PROPN NNP Number=Sing _ _ _ _ 25 separation separation NOUN NN Number=Sing _ _ _ _ 26 unit unit NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1196 # text = B cells were prestimulated with SAC for 48 hrs. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 prestimulated prestimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 SAC Sac PROPN NNP Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 48 48 NUM CD NumType=Card _ _ _ _ 9 hrs hr NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 1197 # text = Then, cells were incubated with medium or IL-10 (100 ng/ml) for 10 to 120 min. 1 Then then ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 incubated incubate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 medium medium NOUN NN Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 IL-10 IL-10 NUM CD NumType=Card _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 100 100 NUM CD NumType=Card _ _ _ _ 12 ng/ ng/ PUNCT HYPH _ _ _ _ SpaceAfter=No 13 ml ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 10 10 NUM CD NumType=Card _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 120 120 NUM CD NumType=Card _ _ _ _ 19 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1198 # text = RNA was extracted by phenol/chloroform and c-fos expression was analyzed by PCR assisted mRNA assay. 1 RNA RNa PROPN NNP Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 extracted extract VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 phenol phenol NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 / / PUNCT , _ _ _ _ SpaceAfter=No 7 chloroform chloroform NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 fos fos NOUN NNS Number=Plur _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 PCR PCR PROPN NNP Number=Sing _ _ _ _ 17 assisted assist VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 mRNA mRNA DET DT Definite=Ind|PronType=Art _ _ _ _ 19 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1199 # text = A significant 2-4 fold increase of c-fos expression was observed within 30 min of stimulation with IL-10 (p < 0.01). 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 significant significant ADJ JJ Degree=Pos _ _ _ _ 3 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - SYM SYM _ _ _ _ SpaceAfter=No 5 4 4 NUM CD NumType=Card _ _ _ _ 6 fold fold NOUN NN Number=Sing _ _ _ _ 7 increase increase NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 fos fo NOUN NNS Number=Plur _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 within within ADP IN _ _ _ _ _ 16 30 30 NUM CD NumType=Card _ _ _ _ 17 min min NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 10 10 NUM CD NumType=Card _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 p p NOUN NN Number=Sing _ _ _ _ 26 < < PUNCT -LRB- _ _ _ _ _ 27 0.01 0.01 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1200 # text = After 2 hrs c-fos expression declined to basal levels. 1 After after ADP IN _ _ _ _ _ 2 2 2 NUM CD NumType=Card _ _ _ _ 3 hrs hr NOUN NNS Number=Plur _ _ _ _ 4 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 fos fo NOUN NNS Number=Plur _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 declined decline VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 basal basal ADJ JJ Degree=Pos _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 1201 # text = The effect of IL-10 was dose-dependent with a maximum stimulation using 100 ng/ml of IL-10. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 10 10 NUM CD NumType=Card _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 maximum maximum NOUN NN Number=Sing _ _ _ _ 14 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 15 using use VERB VBG VerbForm=Ger _ _ _ _ 16 100 100 NUM CD NumType=Card _ _ _ _ 17 ng/ml ng/ml NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1202 # text = The IL-10 effect on c-fos expression was not blocked by polymyxin B. Using the tyrosine kinase inhibitor genistein (10 microM) a complete inhibition of IL-10 induced c-fos expression was observed. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 10 10 NUM CD NumType=Card _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 fos fo NOUN NNS Number=Plur _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 polymyxin polymyxin NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ 18 Using use VERB VBG VerbForm=Ger _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 21 kinase kinase NOUN NN Number=Sing _ _ _ _ 22 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 23 genistein genistein NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 10 10 NUM CD NumType=Card _ _ _ _ 26 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 complete complete ADJ JJ Degree=Pos _ _ _ _ 30 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 10 10 NUM CD NumType=Card _ _ _ _ 35 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 fos fo NOUN NNS Number=Plur _ _ _ _ 39 expression expression NOUN NN Number=Sing _ _ _ _ 40 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 41 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 1203 # text = In addition, H-7 (10 microM), a specific inhibitor of serine/threonine kinases, significantly blocked IL-10 mediated c-fos expression (p < 0.05). 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 H H NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 7 7 NUM CD NumType=Card _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 10 10 NUM CD NumType=Card _ _ _ _ 9 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 threonine threonine NUM CD NumType=Card _ _ _ _ 19 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 significantly significantly ADV RB _ _ _ _ _ 22 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 IL il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - SYM SYM _ _ _ _ SpaceAfter=No 25 10 10 NUM CD NumType=Card _ _ _ _ 26 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 fos fo NOUN NN Number=Sing _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 p p NOUN NN Number=Sing _ _ _ _ 33 < < PUNCT -LRB- _ _ _ _ _ 34 0.05 0.05 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 1204 # text = In conclusion, these data show that IL-10 induces c-fos expression in human B-cells by activation of tyrosine and serine/threonine kinases. 1 In in ADP IN _ _ _ _ _ 2 conclusion conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 data data NOUN NN Number=Sing _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - SYM SYM _ _ _ _ SpaceAfter=No 10 10 10 NUM CD NumType=Card _ _ _ _ 11 induces induce NOUN NNS Number=Plur _ _ _ _ 12 c- c- SYM SYM _ _ _ _ SpaceAfter=No 13 fos fo NOUN NNS Number=Plur _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 / / PUNCT , _ _ _ _ SpaceAfter=No 26 threonine threonine NUM CD NumType=Card _ _ _ _ 27 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1205 # text = Since this is the first report on IL-10 induced signal transduction, these data may help to identify the intracellular mechanisms by which IL-10 stimulates human B-cells. 1 Since since SCONJ IN _ _ _ _ _ 2 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 6 report report NOUN NN Number=Sing _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 10 10 NUM CD NumType=Card _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 signal signal NOUN NN Number=Sing _ _ _ _ 13 transduction transduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 16 data data NOUN NN Number=Sing _ _ _ _ 17 may may AUX MD VerbForm=Fin _ _ _ _ 18 help help VERB VB VerbForm=Inf _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 identify identify VERB VB VerbForm=Inf _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 23 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 which which PRON WDT PronType=Rel _ _ _ _ 26 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - SYM SYM _ _ _ _ SpaceAfter=No 28 10 10 NUM CD NumType=Card _ _ _ _ 29 stimulates stimulate NOUN NNS Number=Plur _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1206 # text = Document 003002422 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002422 003002422 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1207 # text = GM-CSF and IL-2 share common control mechanisms in response to costimulatory signals in T cells. 1 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 CSF CSF PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 share share NOUN NN Number=Sing _ _ _ _ 9 common common ADJ JJ Degree=Pos _ _ _ _ 10 control control NOUN NN Number=Sing _ _ _ _ 11 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 response response NOUN NN Number=Sing _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 costimulatory costimulatory VERB VB VerbForm=Inf _ _ _ _ 16 signals signal NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1208 # text = Antigen complexed with major histocompatibility complex class I or II molecules on the surface of antigen presenting cells interacts with the T cell receptor (TCR) on the surface of T cells and initiates an activation cascade. 1 Antigen Antigen PROPN NNP Number=Sing _ _ _ _ 2 complexed complex VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 major major ADJ JJ Degree=Pos _ _ _ _ 5 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 6 complex complex NOUN NN Number=Sing _ _ _ _ 7 class class NOUN NN Number=Sing _ _ _ _ 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 II ii NUM CD NumType=Card _ _ _ _ 11 molecules molecule NOUN NNS Number=Plur _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 surface surface NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 antigen antigen NOUN NNS Number=Plur _ _ _ _ 17 presenting presenting VERB VBG VerbForm=Ger _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 interacts interact NOUN NNS Number=Plur _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 T T PROPN NNP Number=Sing _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 receptor receptor NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 on on ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 surface surface NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 T t PROPN NNP Number=Sing _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 initiates initiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 activation activation NOUN NN Number=Sing _ _ _ _ 38 cascade cascade NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 1209 # text = So called costimulatory signals, mediated by other cell surface interactions or soluble cytokines produced by antigen presenting cells, are also required for complete T cell activation. 1 So so ADV RB _ _ _ _ _ 2 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 4 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 other other ADJ JJ Degree=Pos _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 surface surface NOUN NN Number=Sing _ _ _ _ 11 interactions interaction NOUN NNS Number=Plur _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 14 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 15 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 18 presenting presenting ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 also also ADV RB _ _ _ _ _ 23 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 complete complete ADJ JJ Degree=Pos _ _ _ _ 26 T T PROPN NNP Number=Sing _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1210 # text = High levels of cytokine gene expression in T cells also required both TCR and costimulatory signals. 1 High high ADJ JJ Degree=Pos _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 also also ADV RB _ _ _ _ _ 11 required require VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 both both DET DT _ _ _ _ _ 13 TCR TCR NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 16 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1211 # text = The granulocyte-macrophage colony-stimulating factor requires sequences in the promoter as well as a powerful enhancer located 3kb upstream to respond to TCR-like signals. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 5 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 stimulating stimulating NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 sequences sequence NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 as as ADV RB _ _ _ _ _ 15 well well ADV RB Degree=Pos _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 powerful powerful ADJ JJ Degree=Pos _ _ _ _ 19 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 20 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 kb kb NOUN NN Number=Sing _ _ _ _ 23 upstream upstream NOUN NN Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 respond respond VERB VB VerbForm=Inf _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 like like ADP IN _ _ _ _ _ 30 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1212 # text = These promoter and enhancer regions are mainly activated by the transcription factor nuclear factor of activated T cells (NFAT). 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 promoter promoter NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 5 regions region NOUN NNS Number=Plur _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 mainly mainly ADV RB _ _ _ _ _ 8 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1213 # text = The activation of NFAT by TCR signals has been well described for interleukin-2 (IL-2) and IL-4 gene transcription in T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 TCR TCR PROPN NNP Number=Sing _ _ _ _ 7 signals signal NOUN NNS Number=Plur _ _ _ _ 8 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 10 well well ADV RB Degree=Pos _ _ _ _ 11 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 X LS _ _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 4 4 NUM CD NumType=Card _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1214 # text = Costimulatory signals, such as activation of the CD28 cell surface molecule on T cells, lead to activation through a distinct region of the granulocyte-macrophage colony-stimulating factor (GM-CSF) promoter. 1 Costimulatory Costimulatory ADJ JJ Degree=Pos _ _ _ _ 2 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 such such ADJ JJ Degree=Pos _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 surface surface NOUN NN Number=Sing _ _ _ _ 12 molecule molecule NOUN NN Number=Sing _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 lead lead VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 through through ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 23 region region NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 29 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 32 factor factor NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 1215 # text = This region is termed the CK-1 or CD28RE and appears to bind specific members of the NF-kappa B family of transcription factors. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 region region NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 termed term VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 CK ck NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 CD28RE Cd28re NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 bind bind VERB VB VerbForm=Inf _ _ _ _ 15 specific specific ADJ JJ Degree=Pos _ _ _ _ 16 members member NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa NOUN NN Number=Sing _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ _ 23 family family NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1216 # text = Human T leukemia virus type 1 (HTLV-1) infects T cells and can lead to increase GM-CSF expression. 1 Human human PROPN NNP Number=Sing _ _ _ _ 2 T T PROPN NNP Number=Sing _ _ _ _ 3 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 4 virus virus NOUN NN Number=Sing _ _ _ _ 5 type type NOUN NN Number=Sing _ _ _ _ 6 1 1 NUM CD NumType=Card _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 infects infect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 can can AUX MD VerbForm=Fin _ _ _ _ 17 lead lead VERB VB VerbForm=Inf _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 increase increase VERB VB VerbForm=Inf _ _ _ _ 20 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 CSF CSF PROPN NNP Number=Sing _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1217 # text = We have found that the HTLV-1 transactivator protein, tax, acts as a costimulatory signal for GM-CSF and IL-2 gene transcription, in that it can cooperate with TCR signals to mediate high level gene expression. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 HTLV HTLV NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 costimulatory costimulatory NOUN NN Number=Sing _ _ _ _ 18 signal signal NOUN NN Number=Sing _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 CSF CSF PROPN NNP Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 in in SCONJ IN _ _ _ _ _ 31 that that SCONJ IN _ _ _ _ _ 32 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 33 can can AUX MD VerbForm=Fin _ _ _ _ 34 cooperate cooperate VERB VB VerbForm=Inf _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 TCR Tcr NOUN NN Number=Sing _ _ _ _ 37 signals signal NOUN NNS Number=Plur _ _ _ _ 38 to to PART TO _ _ _ _ _ 39 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 40 high high ADJ JJ Degree=Pos _ _ _ _ 41 level level NOUN NN Number=Sing _ _ _ _ 42 gene gene NOUN NN Number=Sing _ _ _ _ 43 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 1218 # text = Tax activates the GM-CSF promoter through the CK-1/CD28RE region and also activates nuclear factor-kappa B binding to this region. 1 Tax tax NOUN NN Number=Sing _ _ _ _ 2 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 CSF CSF PROPN NNP Number=Sing _ _ _ _ 7 promoter promoter VERB VB VerbForm=Inf _ _ _ _ 8 through through ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 CK ck NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1/CD28RE 1/CD28RE NOUN NN Number=Sing _ _ _ _ 13 region region NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 also also ADV RB _ _ _ _ _ 16 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ _ 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 25 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1219 # text = However, other transcription factors or coactivators of NF-kappa B are required for tax activation but these remain to be identified. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 factors factor NOUN NNS Number=Plur _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 coactivators coactivator NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 tax tax NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 but but CCONJ CC _ _ _ _ _ 19 these these PRON DT Number=Plur|PronType=Dem _ _ _ _ 20 remain remain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1220 # text = The CK-1/CD28RE of GM-CSF shows a high degree of similarity to the IL-2 CD28RE and the IL-3 gene also contains a related region. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 CK ck NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 1/CD28RE 1/CD28RE NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 CSF CSF PROPN NNP Number=Sing _ _ _ _ 9 shows show VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 high high ADJ JJ Degree=Pos _ _ _ _ 12 degree degree NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 similarity similarity NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ _ 20 CD28RE Cd28re NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 3 3 NUM CD NumType=Card _ _ _ _ 26 gene gene NOUN NN Number=Sing _ _ _ _ 27 also also ADV RB _ _ _ _ _ 28 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 related related ADJ JJ Degree=Pos _ _ _ _ 31 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1221 # text = This observation, together with the fact that both GM-CSF and IL-2 respond to TCR signals via NFAT, implies a high degree of conservation in the regulation of cytokine gene expression in T cells. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 observation observation NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 together together ADV RB _ _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 fact fact NOUN NN Number=Sing _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 both both CCONJ CC _ _ _ _ _ 10 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 CSF CSF PROPN NNP Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 respond respond NOUN NN Number=Sing _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 TCR TCR VERB VB VerbForm=Inf _ _ _ _ 20 signals signal NOUN NNS Number=Plur _ _ _ _ 21 via via ADP IN _ _ _ _ _ 22 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 implies imply VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 high high ADJ JJ Degree=Pos _ _ _ _ 27 degree degree NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 conservation conservation NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 regulation regulation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 35 gene gene NOUN NN Number=Sing _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 T t PROPN NNP Number=Sing _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1222 # text = Document 003002426 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002426 003002426 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1223 # text = IL-7 reconstitutes multiple aspects of v-Abl-mediated signaling. 1 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 7 7 NUM CD NumType=Card _ _ _ _ 4 reconstitutes reconstitute NOUN NNS Number=Plur _ _ _ _ 5 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 6 aspects aspect NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 v v NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 Abl Abl NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1224 # text = The mechanism by which early lymphoid cells are selectively transformed by v-Abl is currently unknown. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 early early ADJ JJ Degree=Pos _ _ _ _ 6 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 selectively selectively ADV RB _ _ _ _ _ 10 transformed transform VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 v v NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 Abl Abl PROPN NNP Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 currently currently ADV RB _ _ _ _ _ 17 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1225 # text = Previous studies have shown constitutive activation of IL-4 and IL-7 signaling pathways, as measured by activation of Janus protein kinase (JAK)1, JAK3, STAT5, and STAT6, in pre-B cells transformed by v-Abl. 1 Previous previous ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 4 4 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 7 7 NUM CD NumType=Card _ _ _ _ 15 signaling signaling NOUN NN Number=Sing _ _ _ _ 16 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 as as SCONJ IN _ _ _ _ _ 19 measured measure VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 Janus Janus PROPN NNP Number=Sing _ _ _ _ 24 protein protein NOUN NN Number=Sing _ _ _ _ 25 kinase kinase NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 JAK JAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 JAK3 JAK3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 STAT5 STAT5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 STAT6 Stat6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 pre pre X AFX _ _ _ _ SpaceAfter=No 40 -B -b ADJ JJ Degree=Pos _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ _ 42 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 by by ADP IN _ _ _ _ _ 44 v v NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT , _ _ _ _ SpaceAfter=No 46 Abl Abl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 1226 # text = To determine whether activation of these cytokine signaling pathways by v-Abl is important in the cellular events induced by the Abelson murine leukemia virus, the effects of IL-4 and IL-7 on pre-B cells transformed with a temperature-sensitive v-Abl mutant were examined. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 8 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 9 pathways pathway NOUN NNS Number=Plur _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 v v NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 Abl Abl PROPN NNP Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 important important ADJ JJ Degree=Pos _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 19 events event NOUN NNS Number=Plur _ _ _ _ 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 Abelson Abelson PROPN NNP Number=Sing _ _ _ _ 24 murine murine NOUN NN Number=Sing _ _ _ _ 25 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 26 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 effects effect NOUN NNS Number=Plur _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 4 4 NUM CD NumType=Card _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 7 7 NUM CD NumType=Card _ _ _ _ 38 on on ADP IN _ _ _ _ _ 39 pre pre X AFX _ _ _ _ SpaceAfter=No 40 -B -b ADJ JJ Degree=Pos _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ _ 42 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 with with ADP IN _ _ _ _ _ 44 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 45 temperature temperature NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 48 v v NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT , _ _ _ _ SpaceAfter=No 50 Abl Abl PROPN NNP Number=Sing _ _ _ _ 51 mutant mutant NOUN NN Number=Sing _ _ _ _ 52 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 53 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 1227 # text = Whereas IL-4 had little or no effect, IL-7 delayed both the apoptosis and cell cycle arrest that occur upon v-Abl kinase inactivation. 1 Whereas whereas PROPN NNP Number=Sing _ _ _ _ 2 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 4 4 NUM CD NumType=Card _ _ _ _ 5 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 little little ADJ JJ Degree=Pos _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 no no DET DT _ _ _ _ _ 9 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 7 7 NUM CD NumType=Card _ _ _ _ 14 delayed delay ADJ JJ Degree=Pos _ _ _ _ 15 both both CCONJ CC _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 cycle cycle NOUN NN Number=Sing _ _ _ _ 21 arrest arrest NOUN NN Number=Sing _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 occur occur VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 upon upon ADP IN _ _ _ _ _ 25 v v NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 Abl Abl NOUN NN Number=Sing _ _ _ _ 28 kinase kinase NOUN NN Number=Sing _ _ _ _ 29 inactivation inactivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1228 # text = IL-7 also delayed the decreases in the levels of c-Myc, Bcl-2, and Bcl-xL that occur upon loss of v-Abl kinase activity. 1 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 7 7 NUM CD NumType=Card _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 delayed delay VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 decreases decrease NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 levels level NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 c- c- SYM NFP _ _ _ _ SpaceAfter=No 13 Myc Myc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 -2 -2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 xL xL AUX MD VerbForm=Fin _ _ _ _ 22 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 23 occur occur VERB VB VerbForm=Inf _ _ _ _ 24 upon upon ADP IN _ _ _ _ _ 25 loss loss NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 v v NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 Abl Abl NOUN NN Number=Sing _ _ _ _ 30 kinase kinase NOUN NN Number=Sing _ _ _ _ 31 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1229 # text = IL-7 did not maintain v-Abl-mediated differentiation arrest of the pre-B cells, as activation of NF-kappaB and RAG gene transcription was unaffected by IL-7. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 7 7 NUM CD NumType=Card _ _ _ _ 4 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 maintain maintain VERB VB VerbForm=Inf _ _ _ _ 7 v- v- SYM NFP _ _ _ _ SpaceAfter=No 8 Abl Abl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 12 arrest arrest NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 pre pre X AFX _ _ _ _ SpaceAfter=No 16 -B -b ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 as as SCONJ IN _ _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 RAG RAG PROPN NNP Number=Sing _ _ _ _ 27 gene gene PROPN NNP Number=Sing _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 unaffected unaffected ADJ JJ Degree=Pos _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1230 # text = These results identify a potential role for IL-7 signaling pathways in transformation by v-Abl while demonstrating that a combination of IL-4 and IL-7 signaling cannot substitute for an active v-Abl kinase in transformed pre-B cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 identify identify VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 potential potential ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 7 7 NUM CD NumType=Card _ _ _ _ 11 signaling signaling NOUN NN Number=Sing _ _ _ _ 12 pathways pathway NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 transformation transformation NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 v v NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 Abl Abl NOUN NN Number=Sing _ _ _ _ 19 while while SCONJ IN _ _ _ _ _ 20 demonstrating demonstrat VERB VBG VerbForm=Ger _ _ _ _ 21 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 combination combination NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 4 4 NUM CD NumType=Card _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 7 7 NUM CD NumType=Card _ _ _ _ 32 signaling signaling NOUN NN Number=Sing _ _ _ _ 33 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 34 not not PART RB _ _ _ _ _ 35 substitute substitute VERB VB VerbForm=Inf _ _ _ _ 36 for for ADP IN _ _ _ _ _ 37 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 active active ADJ JJ Degree=Pos _ _ _ _ 39 v v NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 Abl Abl NOUN NN Number=Sing _ _ _ _ 42 kinase kinase NOUN NN Number=Sing _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 pre pre X AFX _ _ _ _ SpaceAfter=No 46 -B -b ADJ JJ Degree=Pos _ _ _ _ 47 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1231 # text = Document 003002431 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002431 003002431 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1232 # text = Constitutive activation of NF-kappaB in primary adult T-cell leukemia cells. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 primary primary ADJ JJ Degree=Pos _ _ _ _ 9 adult adult NOUN NN Number=Sing _ _ _ _ 10 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1233 # text = Human T-cell leukemia virus type I (HTLV-I) is an etiologic agent of adult T-cell leukemia (ATL). 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 type type NOUN NN Number=Sing _ _ _ _ 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 etiologic etiologic ADJ JJ Degree=Pos _ _ _ _ 16 agent agent NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 adult adult NOUN NN Number=Sing _ _ _ _ 19 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 ATL ATL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1234 # text = The viral protein Tax induces the activation and nuclear translocalization of transcription factor NF-kappaB, which is proposed to play a crucial role in the transformation of T cells by HTLV-I. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 viral viral ADJ JJ Degree=Pos _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 Tax tax NOUN NN Number=Sing _ _ _ _ 5 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 translocalization translocalization NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 proposed propose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 play play VERB VB VerbForm=Inf _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 25 role role NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 transformation transformation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 T t PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT , _ _ _ _ SpaceAfter=No 35 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 1235 # text = However, the HTLV-I genes including Tax are not expressed significantly in primary leukemic cells from ATL patients. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 genes gene NOUN NNS Number=Plur _ _ _ _ 8 including include VERB VBG VerbForm=Ger _ _ _ _ 9 Tax tax NOUN NN Number=Sing _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 significantly significantly ADV RB _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 primary primary ADJ JJ Degree=Pos _ _ _ _ 16 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 ATL Atl ADJ JJ Degree=Pos _ _ _ _ 20 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1236 # text = In this study, we examined the basis for NF-kappaB activation in freshly isolated leukemic cells from ATL patients. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 basis basis NOUN NN Number=Sing _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 freshly freshly ADV RB _ _ _ _ _ 16 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 ATL ATL PROPN NNP Number=Sing _ _ _ _ 21 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1237 # text = We found that leukemic cells from ATL patients, like HTLV-I-infected T-cell lines, display constitutive NF-kappaB DNA binding activity and increased degradation of IkappaBalpha (an inhibitor of NF-kappaB). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 ATL ATL ADJ JJ Degree=Pos _ _ _ _ 8 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 like like ADP IN _ _ _ _ _ 11 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 I- I- PUNCT : _ _ _ _ SpaceAfter=No 14 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 display display NOUN NN Number=Sing _ _ _ _ 20 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 24 DNA dna NOUN NN Number=Sing _ _ _ _ 25 binding binde VERB VBG VerbForm=Ger _ _ _ _ 26 activity activity NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 degradation degradation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1238 # text = Whereas the NF-kappaB binding activity in Tax-expressing T-cell lines consisted mostly of p50/c-Rel, fresh ATL samples contained p50/p50 and p50/p65 heterodimers. 1 Whereas whereas SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 Tax tax PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 12 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 lines line NOUN NNS Number=Plur _ _ _ _ 15 consisted consist VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 mostly mostly ADV RB _ _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 p50/c p50/c NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 fresh fresh ADJ JJ Degree=Pos _ _ _ _ 23 ATL Atl ADJ JJ Degree=Pos _ _ _ _ 24 samples sample NOUN NNS Number=Plur _ _ _ _ 25 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 p50/p50 p50/p50 NUM CD NumType=Card _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 / / SYM SYM _ _ _ _ SpaceAfter=No 30 p65 p65 NUM CD NumType=Card _ _ _ _ 31 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1239 # text = One T-cell line derived from ATL leukemic cells, TL-Om1, displayed constitutive NF-kappaB activity, as well as enhanced degradation of IkappaBalpha, despite the lack of detectable Tax expression. 1 One one NUM CD NumType=Card _ _ _ _ 2 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 line line NOUN NN Number=Sing _ _ _ _ 5 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 ATL ATL PROPN NNP Number=Sing _ _ _ _ 8 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 TL TL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 Om1 Om1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 displayed display VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 as as ADV RB _ _ _ _ _ 23 well well ADV RB Degree=Pos _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 degradation degradation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 despite despite ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 lack lack NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 35 Tax tax NOUN NN Number=Sing _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 1240 # text = Interestingly, the NF-kappaB in TL-Om1 consists of p50/p50 and p50/p65 like that in fresh primary leukemic cells. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 TL TL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 Om1 Om1 NUM CD NumType=Card _ _ _ _ 11 consists consist NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 p50/ p50/ SYM NFP _ _ _ _ SpaceAfter=No 14 p50 p50 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 / / SYM SYM _ _ _ _ SpaceAfter=No 18 p65 p65 NUM CD NumType=Card _ _ _ _ 19 like like ADP IN _ _ _ _ _ 20 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 fresh fresh ADJ JJ Degree=Pos _ _ _ _ 23 primary primary ADJ JJ Degree=Pos _ _ _ _ 24 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1241 # text = Our results suggest that activation of NF-kappaB occurs through a Tax-independent mechanism in leukemic cells of ATL patients, possibly due to differential NF-kappaB subunit activation. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 occurs occur NOUN NNS Number=Plur _ _ _ _ 11 through through ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 independent independent ADJ JJ Degree=Pos _ _ _ _ 16 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 ATL Atl ADJ JJ Degree=Pos _ _ _ _ 22 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 possibly possibly ADV RB _ _ _ _ _ 25 due due ADP IN _ _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 differential differential ADJ JJ Degree=Pos _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 31 subunit subunit NOUN NN Number=Sing _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1242 # text = Document 003002435 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002435 003002435 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1243 # text = The retinoblastoma gene product negatively regulates transcriptional activation mediated by the human cytomegalovirus IE2 protein. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 retinoblastoma retinoblastoma NOUN NN Number=Sing _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ _ 4 product product NOUN NN Number=Sing _ _ _ _ 5 negatively negatively ADV RB _ _ _ _ _ 6 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 cytomegalovirus cytomegalovirus NOUN NN Number=Sing _ _ _ _ 14 IE2 Ie2 NUM CD NumType=Card _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1244 # text = The IE2 gene product of human cytomegalovirus (HCMV) is one of a few viral regulatory proteins expressed immediately upon infection of the host cell. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 IE2 IE2 NUM CD NumType=Card _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ _ 4 product product NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 cytomegalovirus cytomegalovirus NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 HCMV HCMV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 one one NUM CD NumType=Card _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 few few ADJ JJ Degree=Pos _ _ _ _ 16 viral viral ADJ JJ Degree=Pos _ _ _ _ 17 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 18 proteins protein NOUN NNS Number=Plur _ _ _ _ 19 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 immediately immediately ADV RB _ _ _ _ _ 21 upon upon ADP IN _ _ _ _ _ 22 infection infection NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 host host NOUN NN Number=Sing _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1245 # text = It is a potent transcriptional activator of many viral and cellular promoters. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 potent potent NOUN NN Number=Sing _ _ _ _ 5 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 6 activator activator NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 many many ADJ JJ Degree=Pos _ _ _ _ 9 viral viral ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 12 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 1246 # text = We found that the retinoblastoma susceptibility gene product (Rb) dramatically suppressed this IE2 transactivation of various promoters. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 retinoblastoma retinoblastoma NOUN NN Number=Sing _ _ _ _ 6 susceptibility susceptibility NOUN NN Number=Sing _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 product product NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 Rb Rb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 dramatically dramatically ADV RB _ _ _ _ _ 13 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 15 IE2 IE2 NOUN NN Number=Sing _ _ _ _ 16 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 various various ADJ JJ Degree=Pos _ _ _ _ 19 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1247 # text = However, unlike another tumor suppressor protein, p53, Rb did not have any significant effect on basal levels of transcription, suggesting that Rb specifically interacts with IE2 rather than other cellular factors involved in the general transcription machinery. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 unlike unlike ADP IN _ _ _ _ _ 4 another another DET DT _ _ _ _ _ 5 tumor tumor NOUN NN Number=Sing _ _ _ _ 6 suppressor suppressor NOUN NN Number=Sing _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 p53 p53 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 Rb Rb PROPN NNP Number=Sing _ _ _ _ 12 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 have have VERB VB VerbForm=Inf _ _ _ _ 15 any any DET DT _ _ _ _ _ 16 significant significant ADJ JJ Degree=Pos _ _ _ _ 17 effect effect NOUN NN Number=Sing _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 basal basal ADJ JJ Degree=Pos _ _ _ _ 20 levels level NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 Rb Rb PROPN NNP Number=Sing _ _ _ _ 27 specifically specifically ADV RB _ _ _ _ _ 28 interacts interact VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 IE2 Ie2 NUM CD NumType=Card _ _ _ _ 31 rather rather ADV RB _ _ _ _ _ 32 than than ADP IN _ _ _ _ _ 33 other other ADJ JJ Degree=Pos _ _ _ _ 34 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 35 factors factor NOUN NNS Number=Plur _ _ _ _ 36 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 general general ADJ JJ Degree=Pos _ _ _ _ 40 transcription transcription NOUN NN Number=Sing _ _ _ _ 41 machinery machinery NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 1248 # text = We found by protein-affinity chromatography that Rb in nuclear extracts or produced by in vitro translation directly bound to IE2. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 5 affinity affinity NOUN NN Number=Sing _ _ _ _ 6 chromatography chromatography NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 Rb Rb PROPN NNP Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 extracts extract NOUN NNS Number=Plur _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 vitro vitro NOUN NN Number=Sing _ _ _ _ 17 translation translation NOUN NN Number=Sing _ _ _ _ 18 directly directly ADV RB _ _ _ _ _ 19 bound bound ADJ JJ Degree=Pos _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 IE2 IE2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1249 # text = Our results suggest that Rb may regulate the life cycle of HCMV, which is endemic in the human population. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Rb Rb PROPN NNP Number=Sing _ _ _ _ 6 may may AUX MD VerbForm=Fin _ _ _ _ 7 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 life life NOUN NN Number=Sing _ _ _ _ 10 cycle cycle NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 HCMV HCMV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 endemic endemic ADJ JJ Degree=Pos _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 population population NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1250 # text = Furthermore, these data may provide new insights into the slow rate of HCMV DNA replication in cells and the possible involvement of HCMV in tumorigenesis. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 data data NOUN NN Number=Sing _ _ _ _ 5 may may AUX MD VerbForm=Fin _ _ _ _ 6 provide provide VERB VB VerbForm=Inf _ _ _ _ 7 new new ADJ JJ Degree=Pos _ _ _ _ 8 insights insight NOUN NNS Number=Plur _ _ _ _ 9 into into ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 slow slow ADJ JJ Degree=Pos _ _ _ _ 12 rate rate NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 HCMV Hcmv NOUN NN Number=Sing _ _ _ _ 15 DNA dna NOUN NN Number=Sing _ _ _ _ 16 replication replication NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 possible possible ADJ JJ Degree=Pos _ _ _ _ 22 involvement involvement NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 HCMV HCMV PROPN NNP Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 tumorigenesis tumorigenesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1251 # text = Document 003002440 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002440 003002440 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1252 # text = Regulation of Fas ligand expression and cell death by apoptosis-linked gene 4. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Fas Fas PROPN NNP Number=Sing _ _ _ _ 4 ligand ligand NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 death death NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1253 # text = Programmed cell death is a process required for the normal development of an organism. 1 Programmed programmed VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 death death NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 process process NOUN NN Number=Sing _ _ _ _ 7 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 normal normal ADJ JJ Degree=Pos _ _ _ _ 11 development development NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 organism organism NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 1254 # text = One of the best understood apoptotic pathways occurs in T lymphocytes and is mediated by Fas/Fas ligand (FasL) interaction. 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 best best ADJ JJS Degree=Sup _ _ _ _ 5 understood understand NOUN NN Number=Sing _ _ _ _ 6 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 7 pathways pathway NOUN NNS Number=Plur _ _ _ _ 8 occurs occur NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 T T PROPN NNP Number=Sing _ _ _ _ 11 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 Fas Fas PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 Fas Fas PROPN NNP Number=Sing _ _ _ _ 19 ligand ligand NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 FasL FasL INTJ UH _ _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 interaction interaction NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1255 # text = During studies of apoptosis induced by T cell-receptor engagement, we identified ALG-4F, a truncated transcript that prevents T cell-receptor-induced FasL upregulation and cell death. 1 During during ADP IN _ _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 T T PROPN NNP Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 engagement engagement NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 ALG ALG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 4F 4F PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 truncated truncate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 transcript transcript NOUN NN Number=Sing _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 prevents prevent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 T T PROPN NNP Number=Sing _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 FasL Fasl ADJ JJ Degree=Pos _ _ _ _ 31 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 cell cell NOUN NN Number=Sing _ _ _ _ 34 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1256 # text = Overexpression of full-length ALG-4 induced transcription of FasL and, consequently, apoptosis. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 full full ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 length length NOUN NN Number=Sing _ _ _ _ 6 ALG Alg NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 4 4 NUM CD NumType=Card _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 FasL Fasl NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 consequently consequently ADV RB _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 apoptosis apoptosis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1257 # text = These results indicate that ALG-4 is necessary and sufficient for FasL expression. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 ALG ALG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 4 4 NUM CD NumType=Card _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 FasL Fasl ADJ JJ Degree=Pos _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 1258 # text = Fas/FasL interaction initiates cell death in many other systems, and its dysregulation is a mechanism by which several pathologic conditions arise. 1 Fas Fa NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 / / PUNCT , _ _ _ _ SpaceAfter=No 3 FasL Fasl ADJ JJ Degree=Pos _ _ _ _ 4 interaction interaction NOUN NN Number=Sing _ _ _ _ 5 initiates initiate NOUN NNS Number=Plur _ _ _ _ 6 cell cell VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 death death NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 many many ADJ JJ Degree=Pos _ _ _ _ 10 other other ADJ JJ Degree=Pos _ _ _ _ 11 systems system NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 dysregulation dysregulation NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 which which PRON WDT PronType=Rel _ _ _ _ 21 several several ADJ JJ Degree=Pos _ _ _ _ 22 pathologic pathologic NOUN NN Number=Sing _ _ _ _ 23 conditions condition NOUN NNS Number=Plur _ _ _ _ 24 arise arise VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1259 # text = Understanding the molecular mechanisms of FasL regulation could be very useful in elucidating how these diseases develop and in identifying potential therapeutic targets. 1 Understanding understand VERB VBG VerbForm=Ger _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 FasL Fasl ADJ JJ Degree=Pos _ _ _ _ 7 regulation regulation NOUN NN Number=Sing _ _ _ _ 8 could could AUX MD VerbForm=Fin _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 very very ADV RB _ _ _ _ _ 11 useful useful ADJ JJ Degree=Pos _ _ _ _ 12 in in SCONJ IN _ _ _ _ _ 13 elucidating elucidat VERB VBG VerbForm=Ger _ _ _ _ 14 how how ADV WRB PronType=Int _ _ _ _ 15 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 16 diseases disease NOUN NNS Number=Plur _ _ _ _ 17 develop develop VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 in in SCONJ IN _ _ _ _ _ 20 identifying identify VERB VBG VerbForm=Ger _ _ _ _ 21 potential potential ADJ JJ Degree=Pos _ _ _ _ 22 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 23 targets target NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1260 # text = Document 003002446 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002446 003002446 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1261 # text = Inhibition of NF-AT signal transduction events by a dominant-negative form of calcineurin. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 AT AT ADJ JJ Degree=Pos _ _ _ _ 6 signal signal NOUN NN Number=Sing _ _ _ _ 7 transduction transduction NOUN NN Number=Sing _ _ _ _ 8 events event NOUN NNS Number=Plur _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 dominant dominant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 negative negative ADJ JJ Degree=Pos _ _ _ _ 14 form form NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1262 # text = An inhibitory, "dominant-negative," form of the calcineurin catalytic (A) subunit was prepared, which lacks the calmodulin-binding domain, autoinhibitory domain and most of its catalytic core but possesses the regulatory (B) subunit binding domain. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 inhibitory inhibitory NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 " " PUNCT `` _ _ _ _ SpaceAfter=No 5 dominant dominant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 negative negative ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ SpaceAfter=No 9 " " PUNCT '' _ _ _ _ _ 10 form form NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 14 catalytic catalytic ADJ JJ Degree=Pos _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 subunit subunit NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 prepared prepare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 lacks lack VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 calmodulin calmodulin NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 binding binding VERB VBG VerbForm=Ger _ _ _ _ 28 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 autoinhibitory autoinhibitory NOUN NN Number=Sing _ _ _ _ 31 domain domain NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 most most ADJ JJS Degree=Sup _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 36 catalytic catalytic ADJ JJ Degree=Pos _ _ _ _ 37 core core NOUN NN Number=Sing _ _ _ _ 38 but but CCONJ CC _ _ _ _ _ 39 possesses possess VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 B b X LS _ _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ _ 45 subunit subunit NOUN NN Number=Sing _ _ _ _ 46 binding binde VERB VBG VerbForm=Ger _ _ _ _ 47 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 1263 # text = When tested for its ability to block calcineurin-dependent signaling in Jurkat cells, expression of this "B-subunit knock-out" (BKO) construct suppressed reporter gene activity driven by NF-AT, the pivotal promoter element for interleukin (IL)-2 gene induction. 1 When when ADV WRB PronType=Int _ _ _ _ 2 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 5 ability ability NOUN NN Number=Sing _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 block block VERB VB VerbForm=Inf _ _ _ _ 8 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 11 signaling signaling NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 19 " " PUNCT `` _ _ _ _ SpaceAfter=No 20 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 subunit subunit NOUN NN Number=Sing _ _ _ _ 23 knock knock NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 out out NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 " " PUNCT '' _ _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 BKO BKO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 construct construct NOUN NN Number=Sing _ _ _ _ 31 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 reporter reporter NOUN NN Number=Sing _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ _ 34 activity activity NOUN NN Number=Sing _ _ _ _ 35 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 pivotal pivotal ADJ JJ Degree=Pos _ _ _ _ 43 promoter promoter NOUN NN Number=Sing _ _ _ _ 44 element element NOUN NN Number=Sing _ _ _ _ 45 for for ADP IN _ _ _ _ _ 46 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 47 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 48 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 2 2 NUM CD NumType=Card _ _ _ _ 52 gene gene NOUN NN Number=Sing _ _ _ _ 53 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 1264 # text = Immunoprecipitation of epitope-labeled BKO demonstrated for the formation of a tight complex with endogenous B subunit in Jurkat cells, consistent with an inhibitory mechanism that involves the sequestration of the B subunit. 1 Immunoprecipitation Immunoprecipitation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 epitope epitope NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 labeled label VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 BKO Bko PROPN NNP Number=Sing _ _ _ _ 7 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 formation formation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 tight tight ADJ JJ Degree=Pos _ _ _ _ 14 complex complex NOUN NN Number=Sing _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 subunit subunit NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 27 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 28 that that PRON WDT PronType=Rel _ _ _ _ 29 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 sequestration sequestration NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 B b ADJ JJ Degree=Pos _ _ _ _ 35 subunit subunit NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 1265 # text = Furthermore, the sharply reduced NF-AT activity produced by co-transfecting BKO could be "rescued" by overexpression of transfected B subunit, suggesting that depletion of this subunit was responsible for the inhibition. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 sharply sharply NOUN NN Number=Sing _ _ _ _ 5 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 AT AT PROPN NNP Number=Sing _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by SCONJ IN _ _ _ _ _ 12 co-transfecting co-transfecting VERB VBG VerbForm=Ger _ _ _ _ 13 BKO Bko PROPN NNP Number=Sing _ _ _ _ 14 could could AUX MD VerbForm=Fin _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 " " PUNCT `` _ _ _ _ SpaceAfter=No 17 rescued rescue VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 18 " " PUNCT '' _ _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 B b NOUN NN Number=Sing _ _ _ _ 24 subunit subunit NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 27 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 28 depletion depletion NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 31 subunit subunit NOUN NN Number=Sing _ _ _ _ 32 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 33 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 34 for for ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 inhibition inhibition NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 1266 # text = These data suggest the potential utility of agents that disrupt calcineurin-mediated signal transduction pathways by blocking formation of the catalytically active dimer of calcineurin A and B subunits. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 potential potential ADJ JJ Degree=Pos _ _ _ _ 6 utility utility NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 agents agent NOUN NNS Number=Plur _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 disrupt disrupt VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 calcineurin- calcineurin- SYM SYM _ _ _ _ SpaceAfter=No 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 signal signal NOUN NN Number=Sing _ _ _ _ 14 transduction transduction NOUN NN Number=Sing _ _ _ _ 15 pathways pathway NOUN NNS Number=Plur _ _ _ _ 16 by by SCONJ IN _ _ _ _ _ 17 blocking blocke VERB VBG VerbForm=Ger _ _ _ _ 18 formation formation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 catalytically catalytically ADV RB _ _ _ _ _ 22 active active ADJ JJ Degree=Pos _ _ _ _ 23 dimer dimer NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 26 A a NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 B b ADJ JJ Degree=Pos _ _ _ _ 29 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1267 # text = Document 003002447 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002447 003002447 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1268 # text = Rel-deficient 1 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 deficient deficient NOUN NN Number=Sing _ _ _ _ # sent_id = 1269 # text = T cells exhibit defects in production of interleukin 3 and granulocyte-macrophage colony-stimulating factor. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 exhibit exhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 defects defect NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 production production NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 9 3 3 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 14 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1270 # text = The c-rel protooncogene encodes a subunit of the NF-kappa B-like family of transcription factors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 c- c- SYM NFP _ _ _ _ SpaceAfter=No 3 rel rel ADJ JJ Degree=Pos _ _ _ _ 4 protooncogene protooncogene NOUN NN Number=Sing _ _ _ _ 5 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 subunit subunit NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa PROPN NNP Number=Sing _ _ _ _ 13 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 like like ADJ JJ Degree=Pos _ _ _ _ 16 family family NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1271 # text = Mice lacking 1 Mice mouse NOUN NN Number=Sing _ _ _ _ 2 lacking lack NOUN NN Number=Sing _ _ _ _ # sent_id = 1272 # text = Rel are defective in mitogenic activation of B and T lymphocytes and display impaired humoral immunity. 1 Rel Rel NOUN NN Number=Sing _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 defective defective ADJ JJ Degree=Pos _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 B b PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 display display NOUN NN Number=Sing _ _ _ _ 14 impaired impaire VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 humoral humoral ADJ JJ Degree=Pos _ _ _ _ 16 immunity immunity NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1273 # text = In an attempt to identify changes in gene expression that accompany the T-cell stimulation defects associated with the loss of Rel, we have examined the expression of cell surface activation markers and cytokine production in mitogen-stimulated Rel-/- T cells. 1 In in ADP IN _ _ _ _ _ 2 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 attempt attempt NOUN NN Number=Sing _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 identify identify VERB VB VerbForm=Inf _ _ _ _ 6 changes change NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 gene gene ADJ JJ Degree=Pos _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 accompany accompany DET PDT _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 16 defects defects NOUN NNS Number=Plur _ _ _ _ 17 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 loss loss NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 25 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 surface surface NOUN NN Number=Sing _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ _ 33 markers marker NOUN NNS Number=Plur _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 36 production production NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 - - PUNCT , _ _ _ _ SpaceAfter=No 40 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 -/- -/- PUNCT . _ _ _ _ _ 43 T t PROPN NNP Number=Sing _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 1274 # text = The expression of cell surface markers including the interleukin 2 receptor alpha (IL-2R alpha) chain (CD25), CD69 and L-selectin (CD62) is normal in mitogen-activated Rel-/- T cells, but cytokine production is impaired. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 surface surface NOUN NN Number=Sing _ _ _ _ 6 markers marker NOUN NNS Number=Plur _ _ _ _ 7 including include VERB VBG VerbForm=Ger _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 10 2 2 NUM CD NumType=Card _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 alpha alpha NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2R 2r NOUN NN Number=Sing _ _ _ _ 17 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 chain chain NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 CD25 CD25 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 CD69 CD69 PROPN NNP Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 L-selectin L-selectin PROPN NNP Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 CD62 Cd62 X LS _ _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 normal normal ADJ JJ Degree=Pos _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 mitogen mitogen NUM CD NumType=Card _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 -/- -/- PUNCT . _ _ _ _ _ 38 T t PROPN NNP Number=Sing _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 but but CCONJ CC _ _ _ _ _ 42 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 43 production production NOUN NN Number=Sing _ _ _ _ 44 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 45 impaired impaired ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 1275 # text = In Rel-/- splenic T cell cultures stimulated with phorbol 12-myristate 13-acetate and ionomycin, the levels of IL-3, IL-5, granulocyte- macrophage colony-stimulating factor (GM-CSF), tumor necrosis factor alpha (TNF-alpha), and gamma interferon (IFN-gamma) were only 2- to 3-fold lower compared with normal T cells. 1 In in ADP IN _ _ _ _ _ 2 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 -/- -/- PUNCT . _ _ _ _ _ 4 splenic splenic ADJ JJ Degree=Pos _ _ _ _ 5 T t NOUN NN Number=Sing _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 cultures culture NOUN NNS Number=Plur _ _ _ _ 8 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 11 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 myristate myristate NOUN NN Number=Sing _ _ _ _ 14 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 acetate acetate NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 ionomycin ionomycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 levels level NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ _ 33 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 34 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 37 factor factor NOUN NN Number=Sing _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 tumor tumor ADP IN _ _ _ _ _ 45 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 46 factor factor NOUN NN Number=Sing _ _ _ _ 47 alpha alpha NOUN NN Number=Sing _ _ _ _ 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 53 , , PUNCT , _ _ _ _ _ 54 and and CCONJ CC _ _ _ _ _ 55 gamma gamma NOUN NN Number=Sing _ _ _ _ 56 interferon interferon NOUN NN Number=Sing _ _ _ _ 57 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 58 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 60 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 61 ) ) PUNCT -RRB- _ _ _ _ _ 62 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 63 only only ADV RB _ _ _ _ _ 64 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 65 - - PUNCT HYPH _ _ _ _ _ 66 to to ADP IN _ _ _ _ _ 67 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 68 - - PUNCT , _ _ _ _ SpaceAfter=No 69 fold fold VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 70 lower lower ADJ JJR Degree=Cmp _ _ _ _ 71 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 72 with with ADP IN _ _ _ _ _ 73 normal normal ADJ JJ Degree=Pos _ _ _ _ 74 T t PROPN NNP Number=Sing _ _ _ _ 75 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 76 . . PUNCT . _ _ _ _ _ # sent_id = 1276 # text = In contrast, anti-CD3 and anti-CD28 stimulated Rel-/- T cells, which fail to proliferate, make little or no detectable cytokines. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 anti-CD28 anti-CD28 NUM CD NumType=Card _ _ _ _ 7 stimulated stimulate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 -/- -/- PUNCT . _ _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 fail fail VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 proliferate proliferate VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 make make VERB VB VerbForm=Inf _ _ _ _ 19 little little ADJ JJ Degree=Pos _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 no no DET DT _ _ _ _ _ 22 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 23 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1277 # text = Exogenous IL-2, which restitutes the proliferative response of the anti-CD3- and anti-CD28-treated Rel-/- T cells, restores production of IL-5, TNF-alpha, and IFN-gamma, but not IL-3 and GM-CSF expression to approximately normal levels. 1 Exogenous Exogenous PROPN NNP Number=Sing _ _ _ _ 2 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 restitutes restitute VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 10 response response NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 anti-CD3 anti-CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 anti-CD28 anti-CD28 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 -treated -treated ADJ JJ Degree=Pos _ _ _ _ 18 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 -/- -/- PUNCT . _ _ _ _ _ 20 T t NUM CD NumType=Card _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 restores restore VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 production production NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 but but CCONJ CC _ _ _ _ _ 40 not not ADV RB _ _ _ _ _ 41 IL Il ADV RB _ _ _ _ SpaceAfter=No 42 - - SYM SYM _ _ _ _ SpaceAfter=No 43 3 3 NUM CD NumType=Card _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 CSF CSF PROPN NNP Number=Sing _ _ _ _ 48 expression expression NOUN NN Number=Sing _ _ _ _ 49 to to PART TO _ _ _ _ _ 50 approximately approximately ADV RB _ _ _ _ _ 51 normal normal ADJ JJ Degree=Pos _ _ _ _ 52 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 1278 # text = In contrast to mitogen-activated Rel-/- T cells, lipopolysaccharide-stimulated Rel-/- macrophages produce higher than normal levels of GM-CSF. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 mitogen mitogen VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 -/- -/- PUNCT . _ _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 -/- -/- PUNCT . _ _ _ _ _ 17 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 18 produce produce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 higher higher ADJ JJR Degree=Cmp _ _ _ _ 20 than than ADP IN _ _ _ _ _ 21 normal normal ADJ JJ Degree=Pos _ _ _ _ 22 levels level NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1279 # text = These findings establish that Rel can function as an activator or repressor of gene expression and is required by T lymphocytes for production of IL-3 and GM-CSF. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 establish establish VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Rel Rel PROPN NNP Number=Sing _ _ _ _ 6 can can AUX MD VerbForm=Fin _ _ _ _ 7 function function VERB VB VerbForm=Inf _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 activator activator NOUN NN Number=Sing _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 repressor repressor NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 production production NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 3 3 NUM CD NumType=Card _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1280 # text = Document 003002451 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002451 003002451 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1281 # text = Ligand-dependent repression of the erythroid transcription factor GATA-1 by the estrogen receptor. 1 Ligand Ligand ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 4 repression repression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 GATA GATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 estrogen estrogen ADJ JJ Degree=Pos _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1282 # text = High-dose estrogen administration induces anemia in mammals. 1 High high INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 dose dose VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 estrogen estrogen NUM CD NumType=Card _ _ _ _ 5 administration administration NOUN NN Number=Sing _ _ _ _ 6 induces induce NOUN NNS Number=Plur _ _ _ _ 7 anemia anemion NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 mammals mammal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 1283 # text = In chickens, estrogens stimulate outgrowth of bone marrow-derived erythroid progenitor cells and delay their maturation. 1 In in ADP IN _ _ _ _ _ 2 chickens chicken NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 estrogens estrogen NOUN NNS Number=Plur _ _ _ _ 5 stimulate stimulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 outgrowth outgrowth ADP IN _ _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 bone bone NOUN NN Number=Sing _ _ _ _ 9 marrow marrow NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 13 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 delay delay VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 maturation maturation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1284 # text = This delay is associated with down-regulation of many erythroid cell-specific genes, including alpha- and beta-globin, band 3, band 4.1, and the erythroid cell-specific histone 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 delay delay NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 down down ADV RB _ _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 regulation regulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 many many ADJ JJ Degree=Pos _ _ _ _ 11 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 specific specific ADJ JJ Degree=Pos _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 including include VERB VBG VerbForm=Ger _ _ _ _ 18 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 globin globin NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 band band NOUN NN Number=Sing _ _ _ _ 26 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 band band NOUN NN Number=Sing _ _ _ _ 29 4.1 4.1 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 specific specific ADJ JJ Degree=Pos _ _ _ _ 37 histone histone NOUN NN Number=Sing _ _ _ _ # sent_id = 1285 # text = H5. 1 H5 h5 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ # sent_id = 1286 # text = We show here that estrogens also reduce the number of erythroid progenitor cells in primary human bone marrow cultures. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 estrogens estrogen NOUN NNS Number=Plur _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 reduce reduce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 number number NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 12 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 primary primary ADJ JJ Degree=Pos _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 bone bone NOUN NN Number=Sing _ _ _ _ 18 marrow marrow NOUN NN Number=Sing _ _ _ _ 19 cultures culture NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1287 # text = To address potential mechanisms by which estrogens suppress erythropoiesis, we have examined their effects on GATA-1, an erythroid transcription factor that participates in the regulation of the majority of erythroid cell-specific genes and is necessary for full maturation of erythrocytes. 1 To to PART TO _ _ _ _ _ 2 address address VERB VB VerbForm=Inf _ _ _ _ 3 potential potential ADJ JJ Degree=Pos _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 estrogens estrogen VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 suppress suppress NOUN NN Number=Sing _ _ _ _ 9 erythropoiesis erythropoiesis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 12 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 effects effect NOUN NNS Number=Plur _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 that that PRON WDT PronType=Rel _ _ _ _ 26 participates participate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 regulation regulation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 majority majority NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 specific specific ADJ JJ Degree=Pos _ _ _ _ 38 genes gene NOUN NNS Number=Plur _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 41 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 42 for for ADP IN _ _ _ _ _ 43 full full ADJ JJ Degree=Pos _ _ _ _ 44 maturation maturation NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 erythrocytes erythrocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 1288 # text = We demonstrate that the transcriptional activity of GATA-1 is strongly repressed by the estrogen receptor (ER) in a ligand-dependent manner and that this repression is reversible in the presence of 4-hydroxytamoxifen. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 strongly strongly ADV RB _ _ _ _ _ 13 repressed repress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 estrogen estrogen VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 ER er NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 26 manner manner NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 that that SCONJ IN _ _ _ _ _ 29 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 30 repression repression NOUN NN Number=Sing _ _ _ _ 31 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 reversible reversible ADJ JJ Degree=Pos _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 presence presence NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 hydroxytamoxifen hydroxytamoxifen NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1289 # text = ER-mediated repression of GATA-1 activity occurs on an artificial promoter containing a single GATA-binding site, as well as in the context of an intact promoter which is normally regulated by GATA-1. 1 ER- ER- SYM NFP _ _ _ _ SpaceAfter=No 2 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 repression repression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 occurs occur NOUN NNS Number=Plur _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 artificial artificial ADJ JJ Degree=Pos _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 containing contain VERB VBG VerbForm=Ger _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 single single ADJ JJ Degree=Pos _ _ _ _ 17 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 binding binding VERB VBG VerbForm=Ger _ _ _ _ 20 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 as as ADV RB _ _ _ _ _ 23 well well ADV RB Degree=Pos _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 context context NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 intact intact ADJ JJ Degree=Pos _ _ _ _ 31 promoter promoter NOUN NN Number=Sing _ _ _ _ 32 which which PRON WDT PronType=Rel _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 normally normally ADV RB _ _ _ _ _ 35 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT , _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1290 # text = GATA-1 and ER bind to each other in vitro in the absence of DNA. 1 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 ER er NOUN NN Number=Sing _ _ _ _ 6 bind bind NOUN NN Number=Sing _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 each each DET DT _ _ _ _ _ 9 other other ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 vitro vitro NUM CD NumType=Card _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 absence absence NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1291 # text = In coimmunoprecipitation experiments using transfected COS cells, GATA-1 and ER associate in a ligand-dependent manner. 1 In in ADP IN _ _ _ _ _ 2 coimmunoprecipitation coimmunoprecipitation NOUN NN Number=Sing _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ _ 4 using use VERB VBG VerbForm=Ger _ _ _ _ 5 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 COS Cos NOUN NNS Number=Plur _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 ER er NOUN NN Number=Sing _ _ _ _ 14 associate associate NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 20 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1292 # text = Mapping experiments indicate that GATA-1 and the ER form at least two contacts, which involve the finger region and the N-terminal activation domain of GATA-1. 1 Mapping mapping NOUN NN Number=Sing _ _ _ _ 2 experiments experiment NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 ER er NOUN NN Number=Sing _ _ _ _ 11 form form NOUN NN Number=Sing _ _ _ _ 12 at at ADV RB _ _ _ _ _ 13 least least ADV RBS Degree=Sup _ _ _ _ 14 two two NUM CD NumType=Card _ _ _ _ 15 contacts contact NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 involve involve VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 finger finger NOUN NN Number=Sing _ _ _ _ 21 region region NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 N- n- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 terminal terminal NOUN NN Number=Sing _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 domain domain NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1293 # text = We speculate that estrogens exert effects on erythropoiesis by modulating GATA-1 activity through protein-protein interaction with the ER. (ABSTRACT TRUNCATED AT 250 WORDS) 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 speculate speculate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 estrogens estrogen NOUN NNS Number=Plur _ _ _ _ 5 exert exert VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 effects effect NOUN NNS Number=Plur _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 erythropoiesis erythropoiesis NOUN NN Number=Sing _ _ _ _ 9 by by SCONJ IN _ _ _ _ _ 10 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 11 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 through through ADP IN _ _ _ _ _ 16 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 interaction interaction NOUN NN Number=Sing _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 ER er NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 ABSTRACT Abstract ADV RB _ _ _ _ _ 25 TRUNCATED tRUNCATEd VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 26 AT at ADV RB _ _ _ _ _ 27 250 250 NUM CD NumType=Card _ _ _ _ 28 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1294 # text = Document 003002452 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002452 003002452 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1295 # text = Anti-CD2 receptor antibodies activate the HIV long terminal repeat in T lymphocytes. 1 Anti-CD2 Anti-CD2 NUM CD NumType=Card _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ _ 3 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 4 activate activate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 HIV HIV PROPN NNP Number=Sing _ _ _ _ 7 long long ADJ JJ Degree=Pos _ _ _ _ 8 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 9 repeat repeat NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1296 # text = The CD2 T lymphocyte glycoprotein surface molecule mediates both cell to cell adhesion and T cell activation, two processes that are involved in the spread of HIV infection. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 CD2 CD2 NUM CD NumType=Card _ _ _ _ 3 T t NUM CD NumType=Card _ _ _ _ 4 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 5 glycoprotein glycoprotein NOUN NN Number=Sing _ _ _ _ 6 surface surface NOUN NN Number=Sing _ _ _ _ 7 molecule molecule NOUN NN Number=Sing _ _ _ _ 8 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 both both DET DT _ _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 cell cell VERB VB VerbForm=Inf _ _ _ _ 13 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 T t NOUN NN Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 two two NUM CD NumType=Card _ _ _ _ 20 processes process NOUN NNS Number=Plur _ _ _ _ 21 that that PRON WDT PronType=Rel _ _ _ _ 22 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 involved involved ADJ JJ Degree=Pos _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 spread spread NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 HIV Hiv NOUN NN Number=Sing _ _ _ _ 29 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1297 # text = Treatment of chronically HIV-infected PBMC with anti-CD2 mAb has been shown to induce the expression of infectious virus from these cultures. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 chronically chronically ADV RB _ _ _ _ _ 4 HIV- HIV- PUNCT : _ _ _ _ SpaceAfter=No 5 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 PBMC Pbmc NOUN NN Number=Sing _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 anti-CD2 anti-CD2 NUM CD NumType=Card _ _ _ _ 9 mAb mAb PROPN NNP Number=Sing _ _ _ _ 10 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 12 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 induce induce VERB VB VerbForm=Inf _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 infectious infectious ADJ JJ Degree=Pos _ _ _ _ 19 virus virus NOUN NN Number=Sing _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 22 cultures culture NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1298 # text = In this study we investigated the mechanisms whereby anti-CD2 antibodies stimulate viral production. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 8 whereby whereby ADV RP _ _ _ _ _ 9 anti-CD2 anti-CD2 NUM CD NumType=Card _ _ _ _ 10 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 11 stimulate stimulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 viral viral ADJ JJ Degree=Pos _ _ _ _ 13 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 1299 # text = We demonstrate that treatment of transiently transfected T lymphocytes with anti-CD2 antibodies results in activation of the HIV long terminal repeat. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 treatment treatment NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 transiently transiently ADV RB _ _ _ _ _ 7 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 anti-CD2 anti-CD2 NUM CD NumType=Card _ _ _ _ 12 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 13 results result NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 HIV HIV PROPN NNP Number=Sing _ _ _ _ 19 long long ADJ JJ Degree=Pos _ _ _ _ 20 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 21 repeat repeat NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1300 # text = Furthermore, CAT assays using mutated HIV long terminal repeat-CAT constructs and gel shift assays demonstrate that this activation is dependent on the NF-kappa B enhancer. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 CAT cat PROPN NNP Number=Sing _ _ _ _ 4 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 using use VERB VBG VerbForm=Ger _ _ _ _ 6 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 HIV HIV PROPN NNP Number=Sing _ _ _ _ 8 long long ADJ JJ Degree=Pos _ _ _ _ 9 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 10 repeat repeat NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 CAT cat NOUN NN Number=Sing _ _ _ _ 13 constructs constructs NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 gel gel NOUN NN Number=Sing _ _ _ _ 16 shift shift NOUN NN Number=Sing _ _ _ _ 17 assays assay NOUN NNS Number=Plur _ _ _ _ 18 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1301 # text = These studies suggest that interaction of CD2 with its natural ligand, LFA-3, may play a role in regulation of HIV expression. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 interaction interaction NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 CD2 Cd2 NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 10 natural natural ADJ JJ Degree=Pos _ _ _ _ 11 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 LFA LFA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 may may AUX MD VerbForm=Fin _ _ _ _ 18 play play VERB VB VerbForm=Inf _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 role role NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 regulation regulation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 HIV HIV PROPN NNP Number=Sing _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1302 # text = Document 003002459 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002459 003002459 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1303 # text = Defective translocation of protein kinase C in multidrug-resistant HL-60 cells confers a reversible loss of phorbol ester-induced monocytic differentiation. 1 Defective defective ADJ JJ Degree=Pos _ _ _ _ 2 translocation translocation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ _ 6 C c NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 multidrug multidrug ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 resistant resistant NOUN NN Number=Sing _ _ _ _ 11 HL Hl NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 60 60 NUM CD NumType=Card _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 confers confer VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 reversible reversible ADJ JJ Degree=Pos _ _ _ _ 18 loss loss NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 21 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 25 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1304 # text = Previous studies have demonstrated that human HL-60 myeloid leukemia cells differentiate in response to phorbol esters. 1 Previous previous ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 HL Hl NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 60 60 NUM CD NumType=Card _ _ _ _ 10 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 11 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 differentiate differentiate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 response response NOUN NN Number=Sing _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 phorbol phorbol VERB VB VerbForm=Inf _ _ _ _ 18 esters ester NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1305 # text = This event is associated with induction of the c-jun early response gene and appearance of a monocytic phenotype. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 event event NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 induction induction NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 c- c- SYM SYM _ _ _ _ SpaceAfter=No 10 jun jun VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 early early ADJ JJ Degree=Pos _ _ _ _ 12 response response NOUN NN Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 appearance appearance NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 19 phenotype phenotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1306 # text = The present studies have examined the effects of vincristine-selected, multidrug resistance on 12-O-tetradecanoylphorbol-13-acetate (TPA)-induced HL-60 cell differentiation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 effects effect NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 vincristine vincristine NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 selected select VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 multidrug multidrug VERB VBG VerbForm=Ger _ _ _ _ 14 resistance resistance NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 O of INTJ UH _ _ _ _ SpaceAfter=No 19 -tetradecanoylphorbol -tetradecanoylphorbol INTJ UH _ _ _ _ SpaceAfter=No 20 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 -acetate -acetate NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 HL Hl NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 60 60 NUM CD NumType=Card _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1307 # text = The results demonstrate that multidrug-resistant HL-60 cells, designated HL-60/vinc, fail to respond to TPA with an increase in c-jun transcripts or other phenotypic characteristics of monocytic differentiation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 multidrug multidrug ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 resistant resistant NOUN NN Number=Sing _ _ _ _ 8 HL Hl NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 60 60 NUM CD NumType=Card _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 HL HL NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 60 60 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 18 vinc vinc NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 fail fail NOUN NN Number=Sing _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 respond respond VERB VB VerbForm=Inf _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 TPA TPA PROPN NNP Number=Sing _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 increase increase NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 c- c- SYM NFP _ _ _ _ SpaceAfter=No 30 jun jun NOUN NN Number=Sing _ _ _ _ 31 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 32 or or CCONJ CC _ _ _ _ _ 33 other other ADJ JJ Degree=Pos _ _ _ _ 34 phenotypic phenotypic ADJ JJ Degree=Pos _ _ _ _ 35 characteristics characteristic NOUN NNS Number=Plur _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 38 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 1308 # text = By contrast, treatment of HL-60/vinc cells with okadaic acid, an inhibitor of serine/threonine protein phosphatases, induces c-jun transcription, growth arrest, and expression of the c-fms gene. 1 By by ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 treatment treatment NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 60 60 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 / / PUNCT , _ _ _ _ SpaceAfter=No 10 vinc vinc NOUN NN Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 14 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 threonine threonine NUM CD NumType=Card _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 induces induce NOUN NNS Number=Plur _ _ _ _ 26 c- c- PUNCT : _ _ _ _ SpaceAfter=No 27 jun jun NOUN NN Number=Sing _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 growth growth NOUN NN Number=Sing _ _ _ _ 31 arrest arrest NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 c- c- SYM NFP _ _ _ _ SpaceAfter=No 38 fms fm NOUN NNS Number=Plur _ _ _ _ 39 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1309 # text = Studies were also performed with an HL-60/vinc revertant (HL-60/vinc/R) line that has regained partial sensitivity to vincristine. 1 Studies study NOUN NNS Number=Plur _ _ _ _ 2 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 performed perform VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 HL HL NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 60 60 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 11 vinc vinc NOUN NN Number=Sing _ _ _ _ 12 revertant revertant NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 HL- HL- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 60 60 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 / / PUNCT , _ _ _ _ SpaceAfter=No 17 vinc/R vinc/R NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 line line NOUN NN Number=Sing _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 regained regaine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 partial partial ADJ JJ Degree=Pos _ _ _ _ 24 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 vincristine vincristine VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1310 # text = The finding that HL-60/vinc/R cells respond to TPA with induction of a monocytic phenotype, but not c-jun expression, suggests that c-jun induction is not obligatory for monocytic differentiation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 finding finding NOUN NN Number=Sing _ _ _ _ 3 that that PRON WDT PronType=Rel _ _ _ _ 4 HL-60/vinc/ HL-60/vinc/ SYM NFP _ _ _ _ SpaceAfter=No 5 R r ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 respond respond VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 TPA TPA PROPN NNP Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 induction induction NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 15 phenotype phenotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 not not ADV RB _ _ _ _ _ 19 c- c- SYM NFP _ _ _ _ SpaceAfter=No 20 jun jun NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 c- c- SYM NFP _ _ _ _ SpaceAfter=No 26 jun jun NOUN NN Number=Sing _ _ _ _ 27 induction induction NOUN NN Number=Sing _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 not not PART RB _ _ _ _ _ 30 obligatory obligatory ADJ JJ Degree=Pos _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 33 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1311 # text = Other studies further demonstrate that the jun-B and fra-1 genes are induced by TPA in both HL-60/vinc and HL-60/vinc/R cells, whereas c-fos expression is attenuated in the HL-60/vinc line. 1 Other other ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 further further ADV RB _ _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 B b NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 fra fra NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 -1 -1 NUM CD NumType=Card _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 TPA TPa PROPN NNP Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 both both CCONJ CC _ _ _ _ _ 20 HL-60 HL-60 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 /vinc /vinc NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 HL-60/vinc/R Hl-60/vinc/r ADJ JJ Degree=Pos _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 whereas wherea SCONJ IN _ _ _ _ _ 27 c- c- SYM SYM _ _ _ _ SpaceAfter=No 28 fos fo NOUN NNS Number=Plur _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 attenuated attenuate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 HL Hl NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 60 60 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 38 vinc vinc NOUN NN Number=Sing _ _ _ _ 39 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1312 # text = Since TPA activates protein kinase C (PKC), we examined translocation of PKC from the cytosol to the membrane fraction. 1 Since since SCONJ IN _ _ _ _ _ 2 TPA TPA PROPN NNP Number=Sing _ _ _ _ 3 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ _ 6 C C PROPN NNP Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 12 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 translocation translocation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 PKC PKC PROPN NNP Number=Sing _ _ _ _ 16 from from ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 membrane membrane NOUN NN Number=Sing _ _ _ _ 22 fraction fraction NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1313 # text = Although HL-60 and HL-60/vinc/R cells demonstrated translocation of PKC activity, this subcellular redistribution was undetectable in HL-60/vinc cells. 1 Although although SCONJ IN _ _ _ _ _ 2 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - SYM SYM _ _ _ _ SpaceAfter=No 4 60 60 NUM CD NumType=Card _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 HL-60/vinc/ HL-60/vinc/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 R be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 translocation translocation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 PKC PKC PROPN NNP Number=Sing _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 16 subcellular subcellular ADJ JJ Degree=Pos _ _ _ _ 17 redistribution redistribution NOUN NN Number=Sing _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 undetectable undetectable ADJ JJ Degree=Pos _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 60 60 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 / / PUNCT , _ _ _ _ SpaceAfter=No 25 vinc vinc NOUN NN Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1314 # text = Activity of the mitogen-activated protein kinase family with associated phosphorylation of c-Jun Y-peptide was markedly diminished in TPA-treated HL-60/vinc cells, but not in response to okadaic acid. 1 Activity activity NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 kinase kinase NOUN NN Number=Sing _ _ _ _ 9 family family NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 Jun Jun PROPN NNP Number=Sing _ _ _ _ 17 Y- y- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 peptide peptide NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 markedly markedly ADV RB _ _ _ _ _ 21 diminished diminish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 HL Hl NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 60 60 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 30 vinc vinc NOUN NN Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 but but CCONJ CC _ _ _ _ _ 34 not not ADV RB _ _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 response response NOUN NN Number=Sing _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 39 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1315 # text = Taken together, these findings suggest that vincristine resistance confers insensitivity to TPA-induced differentiation and can include defects in PKC-mediated signaling events and induction of jun/fos early response gene expression. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 findings finding NOUN NNS Number=Plur _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 vincristine vincristine ADJ JJ Degree=Pos _ _ _ _ 9 resistance resistance NOUN NN Number=Sing _ _ _ _ 10 confers confer NOUN NNS Number=Plur _ _ _ _ 11 insensitivity insensitivity ADV RB _ _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 can can AUX MD VerbForm=Fin _ _ _ _ 19 include include VERB VB VerbForm=Inf _ _ _ _ 20 defects defect NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 mediated mediated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 signaling signaling VERB VBG VerbForm=Ger _ _ _ _ 26 events event NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 induction induction NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 / / PUNCT , _ _ _ _ SpaceAfter=No 32 fos fo VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 early early ADJ JJ Degree=Pos _ _ _ _ 34 response response NOUN NN Number=Sing _ _ _ _ 35 gene gene NOUN NN Number=Sing _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1316 # text = Document 003002466 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002466 003002466 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1317 # text = HMG-I binds to GATA motifs: implications for an HPFH syndrome. 1 HMG Hmg INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 4 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 GATA GATa PROPN NNP Number=Sing _ _ _ _ 7 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 : : PUNCT : _ _ _ _ _ 9 implications implication NOUN NNS Number=Plur _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 HPFH Hpfh ADJ JJ Degree=Pos _ _ _ _ 13 syndrome syndrome NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1318 # text = We have examined binding of the nuclear protein HMG-I to the human gamma-globin promoter. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 HMG Hmg NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 globin globin NOUN NN Number=Sing _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1319 # text = We find that HMG-I binds preferentially to the more 3' of a pair of GATA motifs in the gamma-globin promoter; this paired motif is bound by the erythroid factor GATA-1. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 find find VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 HMG Hmg VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 preferentially preferentially ADV RB _ _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 more more ADJ JJR Degree=Cmp _ _ _ _ 12 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ' ' NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 pair pair NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 GATA GATA PROPN NNP Number=Sing _ _ _ _ 19 motifs motif NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 globin globin NOUN NN Number=Sing _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ; ; PUNCT , _ _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 paired paired ADJ JJ Degree=Pos _ _ _ _ 29 motif motif NOUN NN Number=Sing _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 bound bound ADJ JJ Degree=Pos _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ _ 36 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 1320 # text = A naturally occurring mutation (-175 T-C) in the area bound by HMG-I results in overexpression of gamma-globin in adult red blood cells (HPFH) and up-regulation of the gamma-globin promoter in in vitro expression assays; HMG-I does not bind to this mutant sequence. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 naturally naturally ADV RB _ _ _ _ _ 3 occurring occurre ADJ JJ Degree=Pos _ _ _ _ 4 mutation mutation NOUN NN Number=Sing _ _ _ _ 5 (- (- PUNCT . _ _ _ _ SpaceAfter=No 6 175 175 NUM CD NumType=Card _ _ _ _ 7 T T PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 area area NOUN NN Number=Sing _ _ _ _ 14 bound bound ADJ JJ Degree=Pos _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 HMG HMG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 19 results result NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 globin globin NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 adult adult ADJ JJ Degree=Pos _ _ _ _ 28 red red ADJ JJ Degree=Pos _ _ _ _ 29 blood blood NOUN NN Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 HPFH HPFH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 regulation regulation NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 globin globin NOUN NN Number=Sing _ _ _ _ 43 promoter promoter NOUN NN Number=Sing _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 vitro vitro NUM CD NumType=Card _ _ _ _ 47 expression expression NOUN NN Number=Sing _ _ _ _ 48 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 ; ; PUNCT , _ _ _ _ _ 50 HMG Hmg INTJ UH _ _ _ _ SpaceAfter=No 51 - - PUNCT , _ _ _ _ SpaceAfter=No 52 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 53 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 54 not not PART RB _ _ _ _ _ 55 bind bind VERB VB VerbForm=Inf _ _ _ _ 56 to to ADP IN _ _ _ _ _ 57 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 58 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 59 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 1321 # text = A survey of GATA motifs from other globin cis-elements demonstrates HMG-I binding to most of them. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 survey survey NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 GATA GATA PROPN NNP Number=Sing _ _ _ _ 5 motifs motif NOUN NNS Number=Plur _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 other other ADJ JJ Degree=Pos _ _ _ _ 8 globin globin NOUN NN Number=Sing _ _ _ _ 9 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT : _ _ _ _ SpaceAfter=No 11 elements element NOUN NNS Number=Plur _ _ _ _ 12 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 HMG Hmg PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 most most ADJ JJS Degree=Sup _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1322 # text = These findings implicate HMG-I in the HPFH phenotype; we speculate that it may participate in the formation of multiprotein complexes that regulate globin gene expression. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 implicate implicate ADJ JJ Degree=Pos _ _ _ _ 4 HMG Hmg PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 HPFH Hpfh ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 10 phenotype phenotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ; ; PUNCT , _ _ _ _ _ 12 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 13 speculate speculate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 16 may may AUX MD VerbForm=Fin _ _ _ _ 17 participate participate VERB VB VerbForm=Inf _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 formation formation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 multiprotein multiprotein ADJ JJ Degree=Pos _ _ _ _ 23 complexes complex NOUN NNS Number=Plur _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 globin globin ADJ JJ Degree=Pos _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1323 # text = Document 003002468 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002468 003002468 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1324 # text = A nongenomic mechanism for progesterone-mediated immunosuppression: inhibition of K+ channels, Ca2+ signaling, and gene expression in T lymphocytes. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 nongenomic nongenomic ADJ JJ Degree=Pos _ _ _ _ 3 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 progesterone progesterone VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 immunosuppression immunosuppression NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 : : PUNCT : _ _ _ _ _ 10 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 K k NUM CD NumType=Card _ _ _ SpaceAfter=No 13 + + SYM SYM _ _ _ _ _ 14 channels channel NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 + + SYM SYM _ _ _ _ _ 18 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1325 # text = The mechanism by which progesterone causes localized suppression of the immune response during pregnancy has remained elusive. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 progesterone progesterone VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 causes cause NOUN NNS Number=Plur _ _ _ _ 7 localized localize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 suppression suppression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 immune immune ADJ JJ Degree=Pos _ _ _ _ 12 response response NOUN NN Number=Sing _ _ _ _ 13 during during ADP IN _ _ _ _ _ 14 pregnancy pregnancy NOUN NN Number=Sing _ _ _ _ 15 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 remained remain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 elusive elusive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1326 # text = Using human T lymphocytes and T cell lines, we show that progesterone, at concentrations found in the placenta, rapidly and reversibly blocks voltage-gated and calcium-activated K+ channels (KV and KCa, respectively), resulting in depolarization of the membrane potential. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 13 progesterone progesterone NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 at at ADP IN _ _ _ _ _ 16 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 17 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 placenta placenta NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 rapidly rapidly ADV RB _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 reversibly reversibly ADV RB _ _ _ _ _ 25 blocks block NOUN NNS Number=Plur _ _ _ _ 26 voltage voltage NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 gated gate ADJ JJ Degree=Pos _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 calcium- calcium- SYM NFP _ _ _ _ SpaceAfter=No 31 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 K k NUM CD NumType=Card _ _ _ SpaceAfter=No 33 + + SYM SYM _ _ _ _ _ 34 channels channel NOUN NNS Number=Plur _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 KV KV PROPN NNP Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 KCa KCa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 resulting result VERB VBG VerbForm=Ger _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 depolarization depolarization NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 membrane membrane NOUN NN Number=Sing _ _ _ _ 49 potential potential NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 1327 # text = As a result, Ca2+ signaling and nuclear factor of activated T cells (NF-AT)-driven gene expression are inhibited. 1 As as ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 result result NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 + + SYM SYM _ _ _ _ _ 7 signaling signaling NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 T T PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1328 # text = Progesterone acts distally to the initial steps of T cell receptor (TCR)-mediated signal transduction, since it blocks sustained Ca2+ signals after thapsigargin stimulation, as well as oscillatory Ca2+ signals, but not the Ca2+ transient after TCR stimulation. 1 Progesterone Progesterone PRON NN Number=Sing _ _ _ _ 2 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 distally distally ADV RB _ _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 initial initial ADJ JJ Degree=Pos _ _ _ _ 7 steps step NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 TCR TCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 - - PUNCT : _ _ _ _ SpaceAfter=No 16 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 signal signal NOUN NN Number=Sing _ _ _ _ 18 transduction transduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 since since SCONJ IN _ _ _ _ _ 21 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 22 blocks block NOUN NNS Number=Plur _ _ _ _ 23 sustained sustain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 Ca2 ca2 PART TO Abbr=Yes _ _ _ SpaceAfter=No 25 + + SYM SYM _ _ _ _ _ 26 signals signal NOUN NNS Number=Plur _ _ _ _ 27 after after ADP IN _ _ _ _ _ 28 thapsigargin thapsigargin NOUN NN Number=Sing _ _ _ _ 29 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 as as ADV RB _ _ _ _ _ 32 well well ADV RB Degree=Pos _ _ _ _ 33 as as ADP IN _ _ _ _ _ 34 oscillatory oscillatory ADJ JJ Degree=Pos _ _ _ _ 35 Ca2 ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 + + SYM SYM _ _ _ _ _ 37 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 but but CCONJ CC _ _ _ _ _ 40 not not ADV RB _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 Ca2 ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 + + SYM SYM _ _ _ _ _ 44 transient transient NOUN NN Number=Sing _ _ _ _ 45 after after ADP IN _ _ _ _ _ 46 TCR Tcr NOUN NN Number=Sing _ _ _ _ 47 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 1329 # text = K+ 1 K K NUM CD NumType=Card _ _ _ SpaceAfter=No 2 + + SYM NFP _ _ _ _ _ # sent_id = 1330 # text = channel blockade by progesterone is specific; other steroid hormones had little or no effect, although the progesterone antagonist RU 486 also blocked KV and KCa channels. 1 channel channel NOUN NN Number=Sing _ _ _ _ 2 blockade blockake VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 progesterone progesterone NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 ; ; PUNCT , _ _ _ _ _ 8 other other ADJ JJ Degree=Pos _ _ _ _ 9 steroid steroid ADJ JJ Degree=Pos _ _ _ _ 10 hormones hormone NOUN NNS Number=Plur _ _ _ _ 11 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 little little ADJ JJ Degree=Pos _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 no no DET DT _ _ _ _ _ 15 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 although although SCONJ IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 progesterone progesterone NOUN NN Number=Sing _ _ _ _ 20 antagonist antagonist NOUN NN Number=Sing _ _ _ _ 21 RU Ru PROPN NNP Number=Sing _ _ _ _ 22 486 486 NUM CD NumType=Card _ _ _ _ 23 also also ADV RB _ _ _ _ _ 24 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 KV KV PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 KCa KCa PROPN NNP Number=Sing _ _ _ _ 28 channels channel NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1331 # text = Progesterone effectively blocked a broad spectrum of K+ channels, reducing both Kv1.3 and charybdotoxin-resistant components of KV current and KCa current in T cells, as well as blocking several cloned KV channels expressed in cell lines. 1 Progesterone Progesterone PROPN NNP Number=Sing _ _ _ _ 2 effectively effectively ADV RB _ _ _ _ _ 3 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 broad broad ADJ JJ Degree=Pos _ _ _ _ 6 spectrum spectrum NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 K k NUM CD NumType=Card _ _ _ SpaceAfter=No 9 + + SYM SYM _ _ _ _ _ 10 channels channel NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 reducing reduce VERB VBG VerbForm=Ger _ _ _ _ 13 both both DET DT _ _ _ _ _ 14 Kv1.3 Kv1.3 NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 charybdotoxin charybdotoxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 resistant resistant NOUN NN Number=Sing _ _ _ _ 19 components component NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 KV KV PROPN NNP Number=Sing _ _ _ _ 22 current current PROPN NNP Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 KCa KCa PROPN NNP Number=Sing _ _ _ _ 25 current current ADJ JJ Degree=Pos _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 T t PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 as as ADV RB _ _ _ _ _ 31 well well ADV RB Degree=Pos _ _ _ _ 32 as as SCONJ IN _ _ _ _ _ 33 blocking block VERB VBG VerbForm=Ger _ _ _ _ 34 several several ADJ JJ Degree=Pos _ _ _ _ 35 cloned clon ADJ JJ Degree=Pos _ _ _ _ 36 KV Kv PROPN NNP Number=Sing _ _ _ _ 37 channels channel NOUN NNS Number=Plur _ _ _ _ 38 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 1332 # text = Progesterone had little or no effect on a cloned voltage-gated Na+ channel, an inward rectifier K+ channel, or on lymphocyte Ca2+ and Cl- channels. 1 Progesterone Progesterone PRON NN Number=Sing _ _ _ _ 2 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 little little ADJ JJ Degree=Pos _ _ _ _ 4 or or CCONJ CC _ _ _ _ _ 5 no no DET DT _ _ _ _ _ 6 effect effect NOUN NN Number=Sing _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 voltage voltage NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 gated gate ADJ JJ Degree=Pos _ _ _ _ 13 Na na PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 + + SYM SYM _ _ _ _ _ 15 channel channel NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 inward inward ADJ JJ Degree=Pos _ _ _ _ 19 rectifier rectifier NOUN NN Number=Sing _ _ _ _ 20 K k NUM CD NumType=Card _ _ _ SpaceAfter=No 21 + + SYM SYM _ _ _ _ _ 22 channel channel NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 27 Ca2 ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 + + SYM SYM _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 Cl Cl NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ _ 32 channels channel NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1333 # text = We propose that direct inhibition of K+ channels in T cells by progesterone contributes to progesterone-induced immunosuppression. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 direct direct ADJ JJ Degree=Pos _ _ _ _ 5 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 K k NUM CD NumType=Card _ _ _ SpaceAfter=No 8 + + SYM SYM _ _ _ _ _ 9 channels channel NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 progesterone progesterone ADJ JJ Degree=Pos _ _ _ _ 15 contributes contribute NOUN NNS Number=Plur _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 progesterone progesterone VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 immunosuppression immunosuppression NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1334 # text = Document 003002472 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002472 003002472 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1335 # text = Involvement of Rel, Fos, and Jun proteins in binding activity to the IL-2 promoter CD28 response element/AP-1 sequence in human T cells. 1 Involvement involvement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 Fos Fos PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 Jun Jun PROPN NNP Number=Sing _ _ _ _ 9 proteins protein VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 in in SCONJ IN _ _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ _ 19 CD28 CD28 NUM CD NumType=Card _ _ _ _ 20 response response NOUN NN Number=Sing _ _ _ _ 21 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 / / PUNCT , _ _ _ _ SpaceAfter=No 23 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 sequence sequence NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 T t PROPN NNP Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1336 # text = CD28 is an important costimulatory molecule in the activation of human T cells. 1 CD28 Cd28 PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 important important ADJ JJ Degree=Pos _ _ _ _ 5 costimulatory costimulatory NOUN NN Number=Sing _ _ _ _ 6 molecule molecule NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 1337 # text = Costimulation of T cells through both the Ag receptor and CD28 leads to high level IL-2 production, which is vital to the development of an immune response in vivo. 1 Costimulation Costimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 through through ADP IN _ _ _ _ _ 6 both both CCONJ CC _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 Ag ag ADJ JJ Degree=Pos _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 CD28 Cd28 NOUN NN Number=Sing _ _ _ _ 12 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 high high ADJ JJ Degree=Pos _ _ _ _ 15 level level NOUN NN Number=Sing _ _ _ _ 16 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 vital vital ADJ JJ Degree=Pos _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 development development NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 immune immune ADJ JJ Degree=Pos _ _ _ _ 30 response response NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1338 # text = Previous reports have suggested the CD28 stimulation contributes to the activation of the IL-2 promoter by up-regulating the activity of several transcription factors, including AP-1 and nuclear factor-kappaB (NF-kappaB)/Rel family members as well as an uncharacterized transcription factor called CD28 response complex. 1 Previous previous ADJ JJ Degree=Pos _ _ _ _ 2 reports report NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 suggested suggest VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 7 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 8 contributes contribute NOUN NNS Number=Plur _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 up up ADV RB _ _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 several several ADJ JJ Degree=Pos _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 including include VERB VBG VerbForm=Ger _ _ _ _ 30 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 -kappaB -kappaB PROPN NNP Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 42 / / PUNCT , _ _ _ _ SpaceAfter=No 43 Rel Rel PROPN NNP Number=Sing _ _ _ _ 44 family family NOUN NN Number=Sing _ _ _ _ 45 members member NOUN NNS Number=Plur _ _ _ _ 46 as as ADV RB _ _ _ _ _ 47 well well ADV RB Degree=Pos _ _ _ _ 48 as as ADP IN _ _ _ _ _ 49 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 50 uncharacterized uncharacterized ADJ JJ Degree=Pos _ _ _ _ 51 transcription transcription NOUN NN Number=Sing _ _ _ _ 52 factor factor NOUN NN Number=Sing _ _ _ _ 53 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 54 CD28 CD28 NUM CD NumType=Card _ _ _ _ 55 response response NOUN NN Number=Sing _ _ _ _ 56 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 1339 # text = While several lines of investigation have suggested that NF-kappaB/Rel family members make up the CD28 response complex transcription factor, other work has not supported this conclusion. 1 While while SCONJ IN _ _ _ _ _ 2 several several ADJ JJ Degree=Pos _ _ _ _ 3 lines line NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 investigation investigation NOUN NN Number=Sing _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 suggested suggest VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 13 Rel Rel PROPN NNP Number=Sing _ _ _ _ 14 family family NOUN NN Number=Sing _ _ _ _ 15 members member NOUN NNS Number=Plur _ _ _ _ 16 make make VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 up up ADP RP _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 20 response response NOUN NN Number=Sing _ _ _ _ 21 complex complex NUM CD NumType=Card _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 other other ADJ JJ Degree=Pos _ _ _ _ 26 work work NOUN NN Number=Sing _ _ _ _ 27 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 not not PART RB _ _ _ _ _ 29 supported support VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 31 conclusion conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1340 # text = Recent studies suggest that the CD28 response element (CD28RE) does not function independently but works instead in conjunction with the adjacent promoter proximal AP-1-binding site and this hypothesis is confirmed here. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 CD28 Cd28 NOUN NN Number=Sing _ _ _ _ 7 response response NOUN NN Number=Sing _ _ _ _ 8 element element NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 CD28RE Cd28re NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 function function VERB VB VerbForm=Inf _ _ _ _ 15 independently independently ADV RB _ _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 works work VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 instead instead ADV RB _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 conjunction conjunction NOUN NN Number=Sing _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 24 promoter promoter NOUN NN Number=Sing _ _ _ _ 25 proximal proximal NOUN NN Number=Sing _ _ _ _ 26 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 binding binding VERB VBG VerbForm=Ger _ _ _ _ 31 site site NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 34 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 35 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 confirmed confirm VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 1341 # text = Also in the current study, binding activity to the CD28RE/AP-1 sequence of the IL-2 promoter is evaluated. 1 Also also ADV RB _ _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 current current ADJ JJ Degree=Pos _ _ _ _ 5 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 CD28RE Cd28re NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 sequence sequence NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 evaluated evaluate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1342 # text = Although four specific complexes can be detected binding to this sequence, only one of these complexes is specific for both the CD28RE and the adjacent AP-1 site. 1 Although although SCONJ IN _ _ _ _ _ 2 four four NUM CD NumType=Card _ _ _ _ 3 specific specific ADJ JJ Degree=Pos _ _ _ _ 4 complexes complexe NOUN NNS Number=Plur _ _ _ _ 5 can can AUX MD VerbForm=Fin _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 only only ADV RB _ _ _ _ _ 14 one one NUM CD NumType=Card _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 17 complexes complex NOUN NNS Number=Plur _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 both both CCONJ CC _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 CD28RE Cd28re NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 27 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1343 # text = Of the NF-kappaB/Rel family members tested, this CD28RE/AP-1-specific complex contains predominantly c-Rel, despite the fact that both p50 and RelA can efficiently bind to the CD28RE. 1 Of of ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 7 Rel Rel PROPN NNP Number=Sing _ _ _ _ 8 family family NOUN NN Number=Sing _ _ _ _ 9 members member NOUN NNS Number=Plur _ _ _ _ 10 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 13 CD28RE Cd28re NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 complex complex NOUN NN Number=Sing _ _ _ _ 21 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 predominantly predominantly ADV RB _ _ _ _ _ 23 c- c- SYM NFP _ _ _ _ SpaceAfter=No 24 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 despite despite ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 fact fact NOUN NN Number=Sing _ _ _ _ 29 that that SCONJ IN _ _ _ _ _ 30 both both CCONJ CC _ _ _ _ _ 31 p50 p50 NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 RelA Rela NOUN NN Number=Sing _ _ _ _ 34 can can AUX MD VerbForm=Fin _ _ _ _ 35 efficiently efficiently ADV RB _ _ _ _ _ 36 bind bind VERB VB VerbForm=Inf _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 CD28RE Cd28re NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1344 # text = c-Fos and c-Jun are also found in this CD28RE/AP-1-specific complex. 1 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 Fos Fo NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 Jun Jun PROPN NNP Number=Sing _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 also also ADV RB _ _ _ _ _ 10 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 13 CD28RE Cd28re NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1345 # text = These data indicate that functional complexes encompassing both the CD28RE and the AP-1-binding sites influence IL-2 promoter activity in CD28-costimulated T cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 functional functional ADJ JJ Degree=Pos _ _ _ _ 6 complexes complexe NOUN NNS Number=Plur _ _ _ _ 7 encompassing encompasse VERB VBG VerbForm=Ger _ _ _ _ 8 both both CCONJ CC _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 CD28RE Cd28re NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 binding binding VERB VBG VerbForm=Ger _ _ _ _ 18 sites site NOUN NNS Number=Plur _ _ _ _ 19 influence influence NOUN NN Number=Sing _ _ _ _ 20 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 CD28 CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 costimulated costimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 T t PROPN NNP Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1346 # text = Document 003002482 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002482 003002482 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1347 # text = Monocyte tethering by P-selectin regulates monocyte chemotactic protein-1 and tumor necrosis factor-alpha secretion. 1 Monocyte Monocyte PROPN NNP Number=Sing _ _ _ _ 2 tethering tether VERB VBG VerbForm=Ger _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 P- p- NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 selectin selectin NOUN NN Number=Sing _ _ _ _ 6 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 monocyte monocyte ADJ JJ Degree=Pos _ _ _ _ 8 chemotactic chemotactic ADJ JJ Degree=Pos _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 tumor tumor NOUN NN Number=Sing _ _ _ _ 14 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 -alpha -alpha NOUN NN Number=Sing _ _ _ _ 17 secretion secretion NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1348 # text = Signal integration and NF-kappa B translocation [see comments] 1 Signal signal ADJ JJ Degree=Pos _ _ _ _ 2 integration integration NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 translocation translocation NOUN NN Number=Sing _ _ _ _ 9 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 see see VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 11 comments comment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 1349 # text = Adhesion molecules that tether circulating leukocytes to endothelial cells may also transduce or modulate outside-in signals for cellular activation, providing an initial regulatory point in the inflammatory response. 1 Adhesion Adhesion NOUN NN Number=Sing _ _ _ _ 2 molecules molecule NOUN NNS Number=Plur _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 tether tether SCONJ IN _ _ _ _ _ 5 circulating circulate VERB VBG VerbForm=Ger _ _ _ _ 6 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 may may AUX MD VerbForm=Fin _ _ _ _ 11 also also ADV RB _ _ _ _ _ 12 transduce transduce VERB VB VerbForm=Inf _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 15 outside outside ADV RB _ _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 in in ADP IN _ _ _ _ _ 18 signals signal NOUN NNS Number=Plur _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 providing provide VERB VBG VerbForm=Ger _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 initial initial ADJ JJ Degree=Pos _ _ _ _ 26 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 27 point point NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 31 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1350 # text = Adhesion of human monocytes to P-selectin, the most rapidly expressed endothelial tethering factor, increased the secretion of monocyte chemotactic protein-1 (MCP-1) and tumor necrosis factor-alpha (TNF-alpha) by the leukocytes when they were stimulated with platelet-activating factor. 1 Adhesion Adhesion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 P- P- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 selectin selectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 most most ADV RBS _ _ _ _ _ 11 rapidly rapidly ADV RB _ _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 14 tethering tethering NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 secretion secretion NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 monocyte monocyte ADJ JJ Degree=Pos _ _ _ _ 22 chemotactic chemotactic ADJ JJ Degree=Pos _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 MCP Mcp NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 tumor tumor NOUN NN Number=Sing _ _ _ _ 33 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 34 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 -alpha -alpha NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 by by ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 44 when when ADV WRB PronType=Int _ _ _ _ 45 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 46 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 47 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 48 with with ADP IN _ _ _ _ _ 49 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT , _ _ _ _ SpaceAfter=No 51 activating activate VERB VBG VerbForm=Ger _ _ _ _ 52 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 1351 # text = Increased cytokine secretion was specifically inhibited by G1, an anti-P-selectin mAb that prevents P-selectin from binding to its ligand (P-selectin glycoprotein ligand-1) on myeloid cells. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 cytokine cytokine PRON PRP _ _ _ _ _ 3 secretion secretion NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 specifically specifically ADV RB _ _ _ _ _ 6 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 G1 G1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 anti-P- anti-P- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 selectin selectin VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 mAb mAb PROPN NNP Number=Sing _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 prevents prevent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 P- P- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 selectin selectin NOUN NN Number=Sing _ _ _ _ 18 from from SCONJ IN _ _ _ _ _ 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 22 ligand ligand NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 P- p- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 selectin selectin NOUN NN Number=Sing _ _ _ _ 26 glycoprotein glycoprotein NOUN NN Number=Sing _ _ _ _ 27 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 1 1 X LS _ _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 on on ADP IN _ _ _ _ _ 32 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1352 # text = Moreover, tethering by P-selectin specifically enhanced nuclear translocation of nuclear factor-kappa B (NF-kappa B), a transcription factor required for expression of MCP-1, TNF-alpha, and other immediate-early genes. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 tethering tether VERB VBG VerbForm=Ger _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 P- p- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 selectin selectin NOUN NN Number=Sing _ _ _ _ 7 specifically specifically ADV RB _ _ _ _ _ 8 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 translocation translocation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ _ 27 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 MCP MCP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 other other ADJ JJ Degree=Pos _ _ _ _ 41 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 early early ADJ JJ Degree=Pos _ _ _ _ 44 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 1353 # text = These results demonstrate that P-selectin, through its ligands on monocytes, may locally regulate cytokine secretion in inflamed tissues. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 P- p- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 selectin selectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 through through ADP IN _ _ _ _ _ 9 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 10 ligands ligand NOUN NNS Number=Plur _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 locally locally ADV RB _ _ _ _ _ 16 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 17 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 18 secretion secretion NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 inflamed inflam VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1354 # text = Document 003002487 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002487 003002487 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1355 # text = Role of cellular tumor necrosis factor receptor-associated factors in NF-kappaB activation and lymphocyte transformation by herpesvirus Saimiri STP. 1 Role role NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 4 tumor tumor NOUN NN Number=Sing _ _ _ _ 5 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 18 transformation transformation NOUN NN Number=Sing _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 herpesvirus herpesvirus NOUN NN Number=Sing _ _ _ _ 21 Saimiri Saimiri PROPN NNP Number=Sing _ _ _ _ 22 STP STP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1356 # text = The STP oncoproteins of the herpesvirus saimiri (HVS) subgroup A strain 11 and subgroup C strain 488 are now found to be stably associated with tumor necrosis factor receptor-associated factor (TRAF) 1, 2, or 3. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 STP sTp NOUN NN Number=Sing _ _ _ _ 3 oncoproteins oncoprotein NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 herpesvirus herpesvirus NOUN NN Number=Sing _ _ _ _ 7 saimiri saimiri NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 HVS HVS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 subgroup subgroup VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 strain strain NOUN NN Number=Sing _ _ _ _ 14 11 11 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 subgroup subgroup VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 C C PROPN NNP Number=Sing _ _ _ _ 18 strain strain NOUN NN Number=Sing _ _ _ _ 19 488 488 NUM CD NumType=Card _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 now now ADV RB _ _ _ _ _ 22 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 be be AUX VB VerbForm=Inf _ _ _ _ 25 stably stably ADV RB _ _ _ _ _ 26 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 tumor tumor NOUN NN Number=Sing _ _ _ _ 29 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ _ 31 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 factor factor NOUN NN Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 TRAF TRAF NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 or or CCONJ CC _ _ _ _ _ 43 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 1357 # text = Mutational analyses identified residues of PXQXT/S in STP-A11 as critical for TRAF association. 1 Mutational Mutational ADJ JJ Degree=Pos _ _ _ _ 2 analyses analysis NOUN NNS Number=Plur _ _ _ _ 3 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 residues residue NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 PXQXT/ PXQXT/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 S s NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 STP STP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 A11 A11 PROPN NNP Number=Sing _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 critical critical ADJ JJ Degree=Pos _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 TRAF Traf PROPN NNP Number=Sing _ _ _ _ 16 association association NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1358 # text = In addition, a somewhat divergent region of STP-C488 is critical for TRAF association. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 somewhat somewhat ADV RB _ _ _ _ _ 6 divergent divergent ADJ JJ Degree=Pos _ _ _ _ 7 region region NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 STP- Stp- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 C488 c488 NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 critical critical ADJ JJ Degree=Pos _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 TRAF Traf NOUN NN Number=Sing _ _ _ _ 15 association association NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 1359 # text = Mutational analysis also revealed that STP-C488 induced NF-kappaB activation that was correlated with its ability to associate with TRAFs. 1 Mutational Mutational ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 STP-C488 STP-C488 PROPN NNP Number=Sing _ _ _ _ 7 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 correlated correlate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 17 ability ability NOUN NN Number=Sing _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 associate associate VERB VB VerbForm=Inf _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 TRAFs Trafs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1360 # text = The HVS STP-C488 P10-->R mutant was deficient in human T-lymphocyte transformation to interleukin-2-independent growth but showed wild-type phenotype for marmoset T-lymphocyte transformation in vitro and in vivo. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 HVS HVS PROPN NNP Number=Sing _ _ _ _ 3 STP-C488 STP-C488 PROPN NNP Number=Sing _ _ _ _ 4 P10--> P10--> PUNCT , _ _ _ _ SpaceAfter=No 5 R R PROPN NNP Number=Sing _ _ _ _ 6 mutant mutant NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 13 transformation transformation NOUN NN Number=Sing _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 interleukin interleukin VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 independent independent ADJ JJ Degree=Pos _ _ _ _ 20 growth growth NOUN NN Number=Sing _ _ _ _ 21 but but CCONJ CC _ _ _ _ _ 22 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 type type NOUN NN Number=Sing _ _ _ _ 26 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 marmoset marmoset NOUN NN Number=Sing _ _ _ _ 29 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 31 transformation transformation NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 vitro vitro NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 1361 # text = The STP-C488 P10-->R mutant was also defective in Rat-1 fibroblast transformation, and fibroblast cell transformation was blocked by a TRAF2 dominant-negative mutant. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 STP-C488 Stp-c488 NUM CD NumType=Card _ _ _ _ 3 P10--> P10--> NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 R R PROPN NNP Number=Sing _ _ _ _ 5 mutant mutant PROPN NNP Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 defective defective ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 Rat Rat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 fibroblast fibroblast NOUN NN Number=Sing _ _ _ _ 14 transformation transformation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 fibroblast fibroblast ADJ JJ Degree=Pos _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 transformation transformation NOUN NN Number=Sing _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 TRAF2 TRAF2 NUM CD NumType=Card _ _ _ _ 25 dominant dominant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 negative negative ADJ JJ Degree=Pos _ _ _ _ 28 mutant mutant NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1362 # text = These data implicate TRAFs in STP-C488-mediated transformation of human lymphocytes and rodent fibroblasts. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 implicate implicate ADJ JJ Degree=Pos _ _ _ _ 4 TRAFs TRAF NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 STP-C488 STP-C488 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT : _ _ _ _ SpaceAfter=No 8 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 transformation transformation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 rodent rodent ADJ JJ Degree=Pos _ _ _ _ 15 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 1363 # text = Other factors are implicated in immortalization of common marmoset T lymphocytes and may also be critical in the transformation of human lymphocytes and rodent fibroblasts. 1 Other other ADJ JJ Degree=Pos _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 immortalization immortalization NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 common common ADJ JJ Degree=Pos _ _ _ _ 9 marmoset marmoset NOUN NN Number=Sing _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 may may AUX MD VerbForm=Fin _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 critical critical ADJ JJ Degree=Pos _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 transformation transformation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 rodent rodent ADJ JJ Degree=Pos _ _ _ _ 25 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1364 # text = Document 003002488 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002488 003002488 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1365 # text = Signal transduction abnormalities in T lymphocytes from patients with advanced renal carcinoma: clinical relevance and effects of cytokine therapy. 1 Signal signal ADJ JJ Degree=Pos _ _ _ _ 2 transduction transduction NOUN NN Number=Sing _ _ _ _ 3 abnormalities abnormality NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 T T PROPN NNP Number=Sing _ _ _ _ 6 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 patients patient NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 advanced advanced ADJ JJ Degree=Pos _ _ _ _ 11 renal renal ADJ JJ Degree=Pos _ _ _ _ 12 carcinoma carcinoma NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 : : PUNCT : _ _ _ _ _ 14 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 15 relevance relevance NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 effects effect NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 20 therapy therapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1366 # text = Studies have demonstrated abnormalities of the CD3/T-cell antigen receptor (TCR) and pathways of signal transduction in T lymphocytes from animals and patients with advanced malignancy. 1 Studies study NOUN NNS Number=Plur _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 abnormalities abnormality NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 CD3/T- Cd3/t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 antigen antigen NOUN NN Number=Sing _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 TCR TCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 pathways pathway NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 signal signal NOUN NN Number=Sing _ _ _ _ 18 transduction transduction NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 animals animal NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 patients patient NOUN NNS Number=Plur _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 advanced advanced ADJ JJ Degree=Pos _ _ _ _ 28 malignancy malignancy NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1367 # text = Diminished expression of TCRzeta and p56(lck) that are associated with the TCR and reduced nuclear localization of RelA containing nuclear factor kappaB (NFkappaB) complexes have been noted. 1 Diminished Diminished ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 TCRzeta TCRzeta PROPN NNP Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 p56 p56 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 lck lck NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 TCR Tcr NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 localization localization NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 RelA RelA PROPN NNP Number=Sing _ _ _ _ 22 containing contain VERB VBG VerbForm=Ger _ _ _ _ 23 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 complexes complex NOUN NNS Number=Plur _ _ _ _ 30 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 32 noted note VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1368 # text = These defects have been described in T cells from patients with malignant melanoma, renal cell carcinoma (RCC), ovarian cancer, and colorectal cancer. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 defects defects NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 patients patient NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 malignant malignant ADJ JJ Degree=Pos _ _ _ _ 13 melanoma melanoma NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 renal renal ADJ JJ Degree=Pos _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 carcinoma carcinoma NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 RCC RCC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 ovarian ovarian ADJ JJ Degree=Pos _ _ _ _ 23 cancer cancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 colorectal colorectal ADJ JJ Degree=Pos _ _ _ _ 27 cancer cancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1369 # text = Preliminary observations also indicate possible correlation with clinical variables such as stage in selected instances. 1 Preliminary Preliminary ADJ JJ Degree=Pos _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 possible possible ADJ JJ Degree=Pos _ _ _ _ 6 correlation correlation NOUN NN Number=Sing _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 9 variables variable NOUN NNS Number=Plur _ _ _ _ 10 such such ADJ JJ Degree=Pos _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 stage stage NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 selected selected VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 instances instance NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 1370 # text = To further characterize altered expression of TCRzeta, p56(lck), and impaired activation of NFkappaB, T lymphocytes were obtained from 65 patients with RCC, the majority of whom were receiving combination cytokine therapy [interleukin (IL)-2, IFN alpha-containing regimens] and 37 control individuals. 1 To to ADP IN _ _ _ _ _ 2 further further ADJ JJ Degree=Pos _ _ _ _ 3 characterize characterize NOUN NN Number=Sing _ _ _ _ 4 altered alter VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 TCRzeta TCRzeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 p56 p56 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 lck lck NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 impaired impaire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 obtained obtain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 65 65 NUM CD NumType=Card _ _ _ _ 26 patients patient NOUN NN Number=Sing _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 RCC RCC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 majority majority NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 whom whom PRON WP PronType=Rel _ _ _ _ 34 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 receiving receive VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 36 combination combination NOUN NN Number=Sing _ _ _ _ 37 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 38 therapy therapy NOUN NN Number=Sing _ _ _ _ 39 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 44 - - SYM SYM _ _ _ _ SpaceAfter=No 45 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 IFN Ifn VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 48 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 containing contain VERB VBG VerbForm=Ger _ _ _ _ 51 regimens regimen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 ] ] PUNCT -RRB- _ _ _ _ _ 53 and and CCONJ CC _ _ _ _ _ 54 37 37 NUM CD NumType=Card _ _ _ _ 55 control control NOUN NN Number=Sing _ _ _ _ 56 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 1371 # text = In 29 of these patients, levels of TCRzeta and p56(lck) were determined by Western blots of T-cell lysates and semiquantitated using densitometry. 1 In in ADP IN _ _ _ _ _ 2 29 29 NUM CD NumType=Card _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 levels level NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 TCRzeta TCRzeta PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 p56 p56 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 lck lck NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 Western western ADJ JJ Degree=Pos _ _ _ _ 19 blots blot NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 lysates lysate NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 semiquantitated semiquantitate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 using use VERB VBG VerbForm=Ger _ _ _ _ 27 densitometry densitometry NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1372 # text = Relative levels were then correlated with a series of clinical variables including response to therapy, performance status, survival, disease sites, age, and others. 1 Relative relative ADJ JJ Degree=Pos _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 then then ADV RB PronType=Dem _ _ _ _ 5 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 series series NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 11 variables variable NOUN NNS Number=Plur _ _ _ _ 12 including include VERB VBG VerbForm=Ger _ _ _ _ 13 response response NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 therapy therapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 performance performance NOUN NN Number=Sing _ _ _ _ 18 status status NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 survival survival NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 disease disease NOUN NN Number=Sing _ _ _ _ 23 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 age age NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 others other NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1373 # text = In another group of 28 patients (three individuals from the first group), the frequency of abnormal NFkappaB activation was studied using electrophoretic mobility shift assays after activation of T cells with phorbol myristate acetate/ionomycin or anti-CD3 monoclonal antibody. 1 In in ADP IN _ _ _ _ _ 2 another another DET DT _ _ _ _ _ 3 group group NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 28 28 NUM CD NumType=Card _ _ _ _ 6 patients patient NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 three three NUM CD NumType=Card _ _ _ _ 9 individuals individual NOUN NNS Number=Plur _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 13 group group NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 frequency frequency NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 abnormal abnormal ADJ JJ Degree=Pos _ _ _ _ 20 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 using use VERB VBG VerbForm=Ger _ _ _ _ 25 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 26 mobility mobility NOUN NN Number=Sing _ _ _ _ 27 shift shift NOUN NN Number=Sing _ _ _ _ 28 assays assays VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 after after ADP IN _ _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 T t PROPN NNP Number=Sing _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 36 myristate myristate NOUN NN Number=Sing _ _ _ _ 37 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 / / PUNCT , _ _ _ _ SpaceAfter=No 39 ionomycin ionomycin NOUN NN Number=Sing _ _ _ _ 40 or or CCONJ CC _ _ _ _ _ 41 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 42 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 43 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 1374 # text = Changes in these signaling molecules during cytokine treatment were also investigated. 1 Changes change NOUN NNS Number=Plur _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 signaling signaling NOUN NN Number=Sing _ _ _ _ 5 molecules molecule NOUN NNS Number=Plur _ _ _ _ 6 during during ADP IN _ _ _ _ _ 7 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 8 treatment treatment NOUN NN Number=Sing _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 also also ADV RB _ _ _ _ _ 11 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 1375 # text = TCRzeta and p56(lck) were detected in the peripheral blood T cells in 27 of 29 patients, and overall, reduced levels were noted visually in 12 of 29 (41%) and 13 of 29 (45%) individuals, respectively. 1 TCRzeta TCRzeta PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 p56 p56 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 lck lck NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 12 blood blood NOUN NN Number=Sing _ _ _ _ 13 T t NUM CD NumType=Card _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 27 27 NUM CD NumType=Card _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 29 29 NUM CD NumType=Card _ _ _ _ 19 patients patient NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 overall overall ADV RB _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 levels level NOUN NNS Number=Plur _ _ _ _ 26 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 noted note VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 visually visually ADV RB _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 12 12 NUM CD NumType=Card _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 29 29 NUM CD NumType=Card _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 41 41 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 13 13 NUM CD NumType=Card _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 29 29 NUM CD NumType=Card _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 45 45 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ _ 45 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 1376 # text = When levels were semiquantitated using densitometry, significant decreases of TCRzeta (P = 0.029) and p56(lck) (P = 0.029) but not CD3epsilon (P = 0.131), compared with control levels, were found. 1 When when ADV WRB PronType=Int _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 semiquantitated semiquantitate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 using use VERB VBG VerbForm=Ger _ _ _ _ 6 densitometry densitometry NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 significant significant ADJ JJ Degree=Pos _ _ _ _ 9 decreases decrease NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 TCRzeta TCRzeta PROPN NNP Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 P P SYM NFP _ _ _ _ _ 14 = = SYM SYM _ _ _ _ _ 15 0.029 0.029 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 p56 p56 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 lck lck NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 P p NOUN NN Number=Sing _ _ _ _ 24 = = SYM SYM _ _ _ _ _ 25 0.029 0.029 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 but but CCONJ CC _ _ _ _ _ 28 not not ADV RB _ _ _ _ _ 29 CD3epsilon CD3epsilon PROPN NNP Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 P P SYM NFP _ _ _ _ _ 32 = = SYM SYM _ _ _ _ _ 33 0.131 0.131 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 control control NOUN NN Number=Sing _ _ _ _ 39 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 42 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 1377 # text = In patients treated with IL-2/IFN alpha-based therapy, relative levels of TCRzeta increased significantly (P = 0.002) on day 15 of cycle one compared with the baseline. 1 In in ADP IN _ _ _ _ _ 2 patients patient NOUN NNS Number=Plur _ _ _ _ 3 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 9 IFN Ifn NOUN NN Number=Sing _ _ _ _ 10 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 therapy therapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 relative relative ADJ JJ Degree=Pos _ _ _ _ 16 levels level NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 TCRzeta TCRzeta PROPN NNP Number=Sing _ _ _ _ 19 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 significantly significantly ADV RB _ _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 P p SYM NFP _ _ _ _ _ 23 = = SYM SYM _ _ _ _ _ 24 0.002 0.002 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 day day NOUN NN Number=Sing _ _ _ _ 28 15 15 NUM CD NumType=Card _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 cycle cycle NOUN NN Number=Sing _ _ _ _ 31 one one NUM CD NumType=Card _ _ _ _ 32 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 baseline baseline NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 1378 # text = Correlations of TCRzeta or p56(lck) levels with response or disease variables, except for lower TCRzeta levels (P < 0.001) in the presence of bone metastases, were not found. 1 Correlations Correlation NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 TCRzeta TCRzeta PROPN NNP Number=Sing _ _ _ _ 4 or or CCONJ CC _ _ _ _ _ 5 p56 p56 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 lck lck NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 levels level NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 response response NOUN NN Number=Sing _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 disease disease NOUN NN Number=Sing _ _ _ _ 14 variables variable NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 except except ADP IN _ _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 lower lower ADJ JJR Degree=Cmp _ _ _ _ 19 TCRzeta TCRzeta PROPN NNP Number=Sing _ _ _ _ 20 levels level NOUN NNS Number=Plur _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 P p NOUN NN Number=Sing _ _ _ _ 23 < < PUNCT -LRB- _ _ _ _ _ 24 0.001 0.001 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 presence presence NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 bone bone NOUN NN Number=Sing _ _ _ _ 31 metastases metastase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 not not PART RB _ _ _ _ _ 35 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 1379 # text = Abnormal NFkappaB activation after stimulation with phorbol myristate acetate/ionomycin and/or anti-CD3 monoclonal antibody was found in 59% of patients (17 of 28) and was not accounted for by the advanced age of the study cohort. 1 Abnormal abnormal PROPN NNP Number=Sing _ _ _ _ 2 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 after after ADP IN _ _ _ _ _ 5 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 8 myristate myristate NOUN NN Number=Sing _ _ _ _ 9 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 /ionomycin /ionomycin NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 or or CCONJ CC _ _ _ _ _ 14 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 15 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 16 antibody antibody NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 59 59 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 % % SYM NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 patients patient NOUN NNS Number=Plur _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 17 17 NUM CD NumType=Card _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 28 28 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 31 not not PART RB _ _ _ _ _ 32 accounted account VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 for for ADP IN _ _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 advanced advanced ADJ JJ Degree=Pos _ _ _ _ 37 age age NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 study study NOUN NN Number=Sing _ _ _ _ 41 cohort cohort NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 1380 # text = Activation of NFkappaB in peripheral blood T cells was inducible during cytokine therapy in four of six individuals who displayed impaired NFkappaB activity prior to therapy. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 6 blood blood NOUN NN Number=Sing _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 11 during during ADP IN _ _ _ _ _ 12 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 13 therapy therapy NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 four four NUM CD NumType=Card _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 six six NUM CD NumType=Card _ _ _ _ 18 individuals individual NOUN NNS Number=Plur _ _ _ _ 19 who who PRON WP PronType=Rel _ _ _ _ 20 displayed display VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 impaired impaire ADJ JJ Degree=Pos _ _ _ _ 22 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 prior prior ADJ JJ Degree=Pos _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 therapy therapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1381 # text = Moreover, impaired activation of NFkappaB does not appear linked to a reduction of TCRzeta expression, because in five patients, normal TCRzeta levels were present although kappaB binding was not inducible. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 impaired impaired ADJ JJ Degree=Pos _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 7 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 appear appear VERB VB VerbForm=Inf _ _ _ _ 10 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 reduction reduction NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 TCRzeta TCRzeta PROPN NNP Number=Sing _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 because because SCONJ IN _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 five five NUM CD NumType=Card _ _ _ _ 21 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 normal normal ADJ JJ Degree=Pos _ _ _ _ 24 TCRzeta TCRzeta PROPN NNP Number=Sing _ _ _ _ 25 levels level NOUN NNS Number=Plur _ _ _ _ 26 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 present present ADJ JJ Degree=Pos _ _ _ _ 28 although although SCONJ IN _ _ _ _ _ 29 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 30 binding binding VERB VBG VerbForm=Ger _ _ _ _ 31 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 32 not not PART RB _ _ _ _ _ 33 inducible inducible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1382 # text = In the majority of patients with advanced RCC, peripheral blood T cells express TCRzeta and p56(lck), and in a subset, reduced levels of these TCRzeta associated molecules are seen that may increase during cytokine-based therapy. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 majority majority NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 patients patient NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 advanced advanced ADJ JJ Degree=Pos _ _ _ _ 8 RCC RCC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 11 blood blood NOUN NN Number=Sing _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 express express VERB VB VerbForm=Inf _ _ _ _ 15 TCRzeta TCRzeta PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 p56 p56 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 lck lck NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 subset subset NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 levels level NOUN NNS Number=Plur _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 31 TCRzeta TCRzeta PROPN NNP Number=Sing _ _ _ _ 32 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 molecules molecule NOUN NNS Number=Plur _ _ _ _ 34 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 that that PRON WDT PronType=Dem _ _ _ _ 37 may may AUX MD VerbForm=Fin _ _ _ _ 38 increase increase VERB VB VerbForm=Inf _ _ _ _ 39 during during ADP IN _ _ _ _ _ 40 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 therapy therapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 1383 # text = Abnormal activation of NFkappaB is also present in >50% of patients and may also revert to normal during IL-2/IFN alpha-based treatment. 1 Abnormal abnormal ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 present presend ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 > > SYM NFP _ _ _ _ SpaceAfter=No 10 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 % % SYM NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 patients patient NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 may may AUX MD VerbForm=Fin _ _ _ _ 16 also also ADV RB _ _ _ _ _ 17 revert revert VERB VB VerbForm=Inf _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 normal normal VERB VB VerbForm=Inf _ _ _ _ 20 during during ADP IN _ _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 25 IFN Ifn NOUN NN Number=Sing _ _ _ _ 26 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1384 # text = This alteration in NFkappaB activation occurred in the presence of normal expression of TCRzeta-associated signaling elements. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 alteration alteration NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 presence presence NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 normal normal ADJ JJ Degree=Pos _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 TCRzeta TCRzeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 signaling signaling NOUN NN Number=Sing _ _ _ _ 18 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1385 # text = The clinical significance of these findings remains unclear. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 3 significance significance NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 findings finding NOUN NNS Number=Plur _ _ _ _ 7 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 unclear unclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1386 # text = Document 003002493 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002493 003002493 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1387 # text = Activation of protein kinase C and elevation of cAMP interact synergistically to raise c-Fos and AP-1 activity in Jurkat cells. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 kinase kinase NOUN NN Number=Sing _ _ _ _ 5 C c NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 elevation elevation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 cAMP camp NOUN NN Number=Sing _ _ _ _ 10 interact interact NOUN NN Number=Sing _ _ _ _ 11 synergistically synergistically ADV RB _ _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 raise raise VERB VB VerbForm=Inf _ _ _ _ 14 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 Fos Fo NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1388 # text = We have earlier found that in Jurkat cells activation of protein kinase C (PKC) enhances the cyclic adenosine monophosphate (cAMP) accumulation induced by adenosine receptor stimulation or activation of Gs. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 earlier earlier ADV RB _ _ _ _ _ 4 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 kinase kinase NOUN NN Number=Sing _ _ _ _ 13 C C PROPN NNP Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 enhances enhance VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 cyclic cyclic ADJ JJ Degree=Pos _ _ _ _ 20 adenosine adenosine NOUN NN Number=Sing _ _ _ _ 21 monophosphate monophosphate NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 26 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 adenosine adenosine NOUN NN Number=Sing _ _ _ _ 29 receptor receptor NOUN NN Number=Sing _ _ _ _ 30 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 31 or or CCONJ CC _ _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 Gs g NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1389 # text = Here we have therefore examined the effect of the phorbol ester PMA (phorbol 12-myristate 13-acetate) which stimulates PKC and a combination of the adenosine receptor agonist NECA (5'-(N-ethyl)-carboxamido adenosine) and forskolin to raise cAMP, on the levels of c-Fos and Jun and on the binding and transcriptional activity of the transcription factor, activator protein-1 (AP-1). 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 therefore therefore ADV RB _ _ _ _ _ 5 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 effect effect NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 11 ester ester NOUN NN Number=Sing _ _ _ _ 12 PMA PMA PROPN NNP Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 15 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 myristate myristate NOUN NN Number=Sing _ _ _ _ 18 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 PKC PKC PROPN NNP Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 combination combination NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 adenosine adenosine ADJ JJ Degree=Pos _ _ _ _ 31 receptor receptor NOUN NN Number=Sing _ _ _ _ 32 agonist agonist NOUN NN Number=Sing _ _ _ _ 33 NECA NECA PROPN NNP Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 '-( '-( PUNCT . _ _ _ _ SpaceAfter=No 37 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ethyl ethyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 carboxamido carboxamido NOUN NN Number=Sing _ _ _ _ 42 adenosine adenosine NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 forskolin forskolin VERB VB VerbForm=Inf _ _ _ _ 46 to to PART TO _ _ _ _ _ 47 raise raise VERB VB VerbForm=Inf _ _ _ _ 48 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 on on ADP IN _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 levels level NOUN NNS Number=Plur _ _ _ _ 53 of of ADP IN _ _ _ _ _ 54 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 56 Fos Fo PROPN NNP Number=Sing _ _ _ _ 57 and and CCONJ CC _ _ _ _ _ 58 Jun Jun PROPN NNP Number=Sing _ _ _ _ 59 and and CCONJ CC _ _ _ _ _ 60 on on ADP IN _ _ _ _ _ 61 the the DET DT Definite=Def|PronType=Art _ _ _ _ 62 binding binding NOUN NN Number=Sing _ _ _ _ 63 and and CCONJ CC _ _ _ _ _ 64 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 65 activity activity NOUN NN Number=Sing _ _ _ _ 66 of of ADP IN _ _ _ _ _ 67 the the DET DT Definite=Def|PronType=Art _ _ _ _ 68 transcription transcription NOUN NN Number=Sing _ _ _ _ 69 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 70 , , PUNCT , _ _ _ _ _ 71 activator activator NOUN NN Number=Sing _ _ _ _ 72 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 73 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 74 1 1 NUM CD NumType=Card _ _ _ _ 75 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 76 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 77 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 78 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 79 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 80 . . PUNCT . _ _ _ _ _ # sent_id = 1390 # text = PMA treatment caused a concentration- and time-dependent increase in both c-Fos and Jun immunoreactivity in contrast to cAMP elevation that had only a slight effect. 1 PMA PMA PROPN NNP Number=Sing _ _ _ _ 2 treatment treatment NOUN NN Number=Sing _ _ _ _ 3 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 concentration concentration NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 11 increase increase NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 both both CCONJ CC _ _ _ _ _ 14 c- c- SYM SYM _ _ _ _ SpaceAfter=No 15 Fos Fos PROPN NNPS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 Jun Jun PROPN NNP Number=Sing _ _ _ _ 18 immunoreactivity immunoreactivity NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 contrast contrast ADJ JJ Degree=Pos _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 cAMP camp VERB VB VerbForm=Inf _ _ _ _ 23 elevation elevation NOUN NN Number=Sing _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 only only ADV RB _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 slight slight ADJ JJ Degree=Pos _ _ _ _ 29 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1391 # text = Both PMA and the combination of NECA and forskolin acted together either to increase (c-Fos) or decrease (Jun) protein levels as well as increasing AP-1 binding, as judged by gel-shift assay, and AP-1 transcriptional activity. 1 Both both CCONJ CC _ _ _ _ _ 2 PMA PMA PROPN NNP Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 combination combination NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NECA NECA PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 forskolin forskolin PROPN NNP Number=Sing _ _ _ _ 10 acted act VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 together together ADV RB _ _ _ _ _ 12 either either CCONJ CC _ _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 increase increase NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 Fos Fos NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 decrease decrease NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ _ 26 levels level NOUN NNS Number=Plur _ _ _ _ 27 as as ADV RB _ _ _ _ _ 28 well well ADV RB Degree=Pos _ _ _ _ 29 as as SCONJ IN _ _ _ _ _ 30 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 31 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 binding binding NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 as as SCONJ IN _ _ _ _ _ 37 judged judge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 by by ADP IN _ _ _ _ _ 39 gel gel NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 shift shift NOUN NN Number=Sing _ _ _ _ 42 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ _ 48 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 49 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 1392 # text = Furthermore there was a clear-cut synergy between the PKC stimulator and the cAMP elevating agents. 1 Furthermore furthermore ADV RB _ _ _ _ _ 2 there there PRON EX _ _ _ _ _ 3 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 clear clear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 cut cut ADJ JJ Degree=Pos _ _ _ _ 8 synergy synergy NOUN NN Number=Sing _ _ _ _ 9 between between ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 PKC Pkc NOUN NN Number=Sing _ _ _ _ 12 stimulator stimulator NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 cAMP camp NOUN NN Number=Sing _ _ _ _ 16 elevating elevate VERB VBG VerbForm=Ger _ _ _ _ 17 agents agent NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1393 # text = The results demonstrate that the simultaneous activation of PKC and elevation of cAMP leads to an enhanced AP-1 transcriptional activity in a T-leukemia cell line, suggesting that the previously observed interaction between the parallel signal transduction pathways may have functional consequences at the level of gene transcription. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 simultaneous simultaneous ADJ JJ Degree=Pos _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 PKC Pkc NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 elevation elevation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 cAMP camp NOUN NN Number=Sing _ _ _ _ 14 leads lead NOUN NNS Number=Plur _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 31 that that SCONJ IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 previously previously ADV RB _ _ _ _ _ 34 observed observe ADJ JJ Degree=Pos _ _ _ _ 35 interaction interaction NOUN NN Number=Sing _ _ _ _ 36 between between ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 parallel parallel ADJ JJ Degree=Pos _ _ _ _ 39 signal signal NOUN NN Number=Sing _ _ _ _ 40 transduction transduction NOUN NN Number=Sing _ _ _ _ 41 pathways pathway NOUN NNS Number=Plur _ _ _ _ 42 may may AUX MD VerbForm=Fin _ _ _ _ 43 have have VERB VB VerbForm=Inf _ _ _ _ 44 functional functional ADJ JJ Degree=Pos _ _ _ _ 45 consequences consequence NOUN NNS Number=Plur _ _ _ _ 46 at at ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 level level NOUN NN Number=Sing _ _ _ _ 49 of of ADP IN _ _ _ _ _ 50 gene gene NOUN NN Number=Sing _ _ _ _ 51 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1394 # text = Document 003002498 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002498 003002498 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1395 # text = c-Myb and Ets proteins synergize to overcome transcriptional repression by ZEB. 1 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 Myb Myb NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 Ets ets NOUN NNS Number=Plur _ _ _ _ 6 proteins protein NOUN NNS Number=Plur _ _ _ _ 7 synergize synergize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 overcome overcome VERB VB VerbForm=Inf _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 repression repression NOUN NN Number=Sing _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 ZEB ZEB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1396 # text = The Zfh family of zinc finger/homeodomain proteins was first identified in Drosophila where it is required for differentiation of tissues such as the central nervous system and muscle. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Zfh Zfh ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 family family NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 zinc zinc NOUN NN Number=Sing _ _ _ _ 6 finger finger NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 homeodomain homeodomain NOUN NN Number=Sing _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 first first ADV RB _ _ _ _ _ 12 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 Drosophila Drosophila PROPN NNP Number=Sing _ _ _ _ 15 where where ADV WRB PronType=Rel _ _ _ _ 16 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 tissues tissue NOUN NNS Number=Plur _ _ _ _ 23 such such ADJ JJ Degree=Pos _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 central central ADJ JJ Degree=Pos _ _ _ _ 27 nervous nervous ADJ JJ Degree=Pos _ _ _ _ 28 system system NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 muscle muscle NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1397 # text = ZEB, a vertebrate homolog of Zfh-1, binds a subset of E boxes and blocks myogenesis through transcriptional repression of muscle genes. 1 ZEB ZEB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 vertebrate vertebrate ADJ JJ Degree=Pos _ _ _ _ 5 homolog homolog NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Zfh Zfh PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 subset subset NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 E e NOUN NN Number=Sing _ _ _ _ 16 boxes boxe NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 blocks block NOUN NNS Number=Plur _ _ _ _ 19 myogenesis myogenesis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 through through ADP IN _ _ _ _ _ 21 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 22 repression repression NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 muscle muscle NOUN NN Number=Sing _ _ _ _ 25 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1398 # text = We present evidence here that ZEB also has an important role in controlling hematopoietic gene transcription. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 evidence evidence NOUN NN Number=Sing _ _ _ _ 4 here here ADV RB PronType=Dem _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 ZEB ZEB PROPN NNP Number=Sing _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 important important ADJ JJ Degree=Pos _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 in in SCONJ IN _ _ _ _ _ 13 controlling controlle VERB VBG VerbForm=Ger _ _ _ _ 14 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1399 # text = Two families of transcription factors that are required for normal hematopoiesis are c-Myb and Ets. 1 Two two NUM CD NumType=Card _ _ _ _ 2 families family NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 factors factor NOUN NNS Number=Plur _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 normal normal ADJ JJ Degree=Pos _ _ _ _ 11 hematopoiesis hematopoiesis NOUN NN Number=Sing _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 c- c- SYM NFP _ _ _ _ SpaceAfter=No 14 Myb Myb PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 Ets Ets PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1400 # text = These factors act synergistically to activate transcription, and this synergy is required for transcription of at least several important hematopoietic genes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 act act VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 synergistically synergistically ADV RB _ _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 activate activate VERB VB VerbForm=Inf _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 synergy synergy NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 at at ADV RB _ _ _ _ _ 18 least least ADV RBS Degree=Sup _ _ _ _ 19 several several ADJ JJ Degree=Pos _ _ _ _ 20 important important ADJ JJ Degree=Pos _ _ _ _ 21 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 22 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1401 # text = ZEB blocks the activity of c-Myb and Ets individually, but together the factors synergize to resist this repression. 1 ZEB ZEB PROPN NNP Number=Sing _ _ _ _ 2 blocks block VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 activity activity NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 Myb Myb PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 Ets ets PROPN NNPS Number=Plur _ _ _ _ 11 individually individually ADV RB _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 together together ADV RB _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 factors factor NOUN NNS Number=Plur _ _ _ _ 17 synergize synergize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 resist resist VERB VB VerbForm=Inf _ _ _ _ 20 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 21 repression repression NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1402 # text = Such repression imposes a requirement for both c-Myb and Ets for transcriptional activity, providing one explanation for why synergy between these factors is important. 1 Such such ADJ JJ Degree=Pos _ _ _ _ 2 repression repression NOUN NN Number=Sing _ _ _ _ 3 imposes impose VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 requirement requirement NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 both both CCONJ CC _ _ _ _ _ 8 c- c- SYM NFP _ _ _ _ SpaceAfter=No 9 Myb Myb NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 Ets et NOUN NNS Number=Plur _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 providing provide VERB VBG VerbForm=Ger _ _ _ _ 17 one one NUM CD NumType=Card _ _ _ _ 18 explanation explanation NOUN NN Number=Sing _ _ _ _ 19 for for SCONJ IN _ _ _ _ _ 20 why why ADV WRB PronType=Int _ _ _ _ 21 synergy synergy NOUN NN Number=Sing _ _ _ _ 22 between between ADP IN _ _ _ _ _ 23 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 24 factors factor NOUN NNS Number=Plur _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 important important ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1403 # text = The balance between repression by ZEB and transcriptional activation by c-Myb/Ets provides a flexible regulatory mechanism for controlling gene expression in hematopoietic cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 balance balance NOUN NN Number=Sing _ _ _ _ 3 between between ADP IN _ _ _ _ _ 4 repression repression NOUN NN Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 ZEB ZEB PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 c- c- SYM NFP _ _ _ _ SpaceAfter=No 12 Myb/ Myb/ SYM NFP _ _ _ _ SpaceAfter=No 13 Ets ets PROPN NNPS Number=Plur _ _ _ _ 14 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 flexible flexible ADJ JJ Degree=Pos _ _ _ _ 17 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 18 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 19 for for SCONJ IN _ _ _ _ _ 20 controlling controlle VERB VBG VerbForm=Ger _ _ _ _ 21 gene gene ADJ JJ Degree=Pos _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1404 # text = We demonstrate that one target of this positive/negative regulation in vivo is the alpha4 integrin, which play a key role in normal hematopoiesis and function of mature leukocytes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 one one NUM CD NumType=Card _ _ _ _ 5 target target NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 positive positive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 / / PUNCT , _ _ _ _ SpaceAfter=No 10 negative negative ADJ JJ Degree=Pos _ _ _ _ 11 regulation regulation NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 vivo vivo NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 alpha4 alpha4 NOUN NN Number=Sing _ _ _ _ 17 integrin integrin NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 play play VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 key key ADJ JJ Degree=Pos _ _ _ _ 23 role role NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 normal normal ADJ JJ Degree=Pos _ _ _ _ 26 hematopoiesis hematopoiesis NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 function function NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 mature mature ADJ JJ Degree=Pos _ _ _ _ 31 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1405 # text = Document 003002502 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002502 003002502 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1406 # text = Differential effects of lipopolysaccharide and tumor necrosis factor on monocytic IkappaB kinase signalsome activation and IkappaB proteolysis. 1 Differential differential ADJ JJ Degree=Pos _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 tumor tumor NOUN NN Number=Sing _ _ _ _ 7 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 11 IkappaB IkappaB NOUN NN Number=Sing _ _ _ _ 12 kinase kinase NOUN NN Number=Sing _ _ _ _ 13 signalsome signalsome NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 IkappaB Ikappab NOUN NN Number=Sing _ _ _ _ 17 proteolysis proteolysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1407 # text = The inflammatory mediators lipopolysaccharide (LPS) and tumor necrosis factor (TNF) are potent activators of NF-kappaB. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 3 mediators mediator NOUN NNS Number=Plur _ _ _ _ 4 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 tumor tumor NOUN NN Number=Sing _ _ _ _ 10 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 potent potent ADJ JJ Degree=Pos _ _ _ _ 17 activators activator NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1408 # text = This study compared the effect of these stimuli on endogenous IkappaB kinase (IKK) signalsome activation and IkappaB phosphorylation/proteolysis in human monocytic cells and investigated the role of the signalsome proteins IKK-alpha, IKK-beta, NF-kappaB-inducing kinase (NIK), IKK-gamma (NF-kappaB essential modulator), and IKK complex-associated protein. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 compared compare VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 11 IkappaB Ikappab NOUN NN Number=Sing _ _ _ _ 12 kinase kinase NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 IKK IKK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 signalsome signalsome ADJ JJ Degree=Pos _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 IkappaB Ikappab NOUN NN Number=Sing _ _ _ _ 20 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 proteolysis proteolysis NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 role role NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 signalsome signalsome ADJ JJ Degree=Pos _ _ _ _ 34 proteins protein NOUN NNS Number=Plur _ _ _ _ 35 IKK IKK NUM CD NumType=Card _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 IKK IKK NUM CD NumType=Card _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 48 kinase kinase NOUN NN Number=Sing _ _ _ _ 49 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 50 NIK NIK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 IKK IKK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 gamma gamma PROPN NNP Number=Sing _ _ _ _ 56 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 57 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 58 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 59 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 60 essential essential ADJ JJ Degree=Pos _ _ _ _ 61 modulator modulator NOUN NN Number=Sing _ _ _ SpaceAfter=No 62 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 63 , , PUNCT , _ _ _ _ _ 64 and and CCONJ CC _ _ _ _ _ 65 IKK IKK PROPN NNP Number=Sing _ _ _ _ 66 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 67 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 68 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 69 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 70 . . PUNCT . _ _ _ _ _ # sent_id = 1409 # text = Kinase assays showed that TNF elicited a rapid but short-lived induction of IKK activity with a 3-fold greater effect on IKK-alpha than on IKK-beta, peaking at 5 min. 1 Kinase Kinase ADJ JJ Degree=Pos _ _ _ _ 2 assays assays NOUN NNS Number=Plur _ _ _ _ 3 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 TNF TNF PROPN NNP Number=Sing _ _ _ _ 6 elicited elicit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 short short ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 lived lived ADJ JJ Degree=Pos _ _ _ _ 13 induction induction NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 IKK IKK NUM CD NumType=Card _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 fold fold VERB VB VerbForm=Inf _ _ _ _ 22 greater greater ADJ JJR Degree=Cmp _ _ _ _ 23 effect effect NOUN NN Number=Sing _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 IKK IKK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 alpha alpha ADV RB _ _ _ _ _ 28 than than ADP IN _ _ _ _ _ 29 on on ADP IN _ _ _ _ _ 30 IKK IKK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 peaking peak VERB VBG VerbForm=Ger _ _ _ _ 35 at at ADP IN _ _ _ _ _ 36 5 5 NUM CD NumType=Card _ _ _ _ 37 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 1410 # text = In contrast, LPS predominantly stimulated IKK-beta activity, which slowly increased, peaking at 30 min. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 LPS LPS INTJ UH _ _ _ _ _ 5 predominantly predominantly ADV RB _ _ _ _ _ 6 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 IKK IKK NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 beta beta NOUN NN Number=Sing _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 slowly slowly ADV RB _ _ _ _ _ 14 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 peaking peak VERB VBG VerbForm=Ger _ _ _ _ 17 at at ADP IN _ _ _ _ _ 18 30 30 NUM CD NumType=Card _ _ _ _ 19 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1411 # text = A second peak was observed at a later time point following LPS stimulation, which consisted of both IKK-alpha and -beta activity. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 peak peak NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 at at ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 later later ADJ JJR Degree=Cmp _ _ _ _ 9 time time NOUN NN Number=Sing _ _ _ _ 10 point point NOUN NN Number=Sing _ _ _ _ 11 following follow VERB VBG VerbForm=Ger _ _ _ _ 12 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 13 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 consisted consist VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 both both DET DT _ _ _ _ _ 19 IKK IKK NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 alpha alpha NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 beta beta ADJ JJ Degree=Pos _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1412 # text = The endogenous levels of the signalsome components were unaffected by stimulation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 3 levels level NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 signalsome signalsome ADJ JJ Degree=Pos _ _ _ _ 7 components component NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 unaffected unaffect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 1413 # text = Furthermore, our studies showed association of the IKK-alpha/beta heterodimer with NIK, IkappaB-alpha and -epsilon in unstimulated cells. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 association association NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 IKK IKK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 13 beta beta NOUN NN Number=Sing _ _ _ _ 14 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 NIK NIK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 alpha alpha PROPN NNP Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1414 # text = Exposure to LPS or TNF led to differential patterns of IkappaB-alpha and IkappaB-epsilon disappearance from and reassembly with the signalsome, whereas IKK-alpha, IKK-beta, and NIK remained complex-associated. 1 Exposure exposure NOUN NN Number=Sing _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 LPS LPS PROPN NNP Number=Sing _ _ _ _ 4 or or CCONJ CC _ _ _ _ _ 5 TNF TNF PROPN NNP Number=Sing _ _ _ _ 6 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 differential differential ADJ JJ Degree=Pos _ _ _ _ 9 patterns pattern NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 IkappaB IkappaB NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 IkappaB Ikappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 18 disappearance disappearance NOUN NN Number=Sing _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 reassembly reassembly ADV RB _ _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 signalsome signalsome NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 whereas whereas SCONJ IN _ _ _ _ _ 27 IKK Ikk NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 IKK IKK NUM CD NumType=Card _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 NIK NIK PROPN NNP Number=Sing _ _ _ _ 37 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 38 complex complex ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 associated associate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 1415 # text = NIK cannot phosphorylate IkappaB-alpha directly, but it appears to be a functionally important subunit, because mutated NIK inhibited stimulus-induced kappaB-dependent transcription more effectively than mutated IKK-alpha or -beta. 1 NIK NIK ADV RB _ _ _ _ _ 2 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 3 not not PART RB _ _ _ _ _ 4 phosphorylate phosphorylate VERB VB VerbForm=Inf _ _ _ _ 5 IkappaB Ikappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 directly directly ADV RB _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 but but CCONJ CC _ _ _ _ _ 11 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 12 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 functionally functionally ADV RB _ _ _ _ _ 17 important important ADJ JJ Degree=Pos _ _ _ _ 18 subunit subunit NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 because because SCONJ IN _ _ _ _ _ 21 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 NIK NIK PROPN NNP Number=Sing _ _ _ _ 23 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 stimulus stimulus NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 kappaB kappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ _ 31 more more ADV RBR _ _ _ _ _ 32 effectively effectively ADV RB _ _ _ _ _ 33 than than ADP IN _ _ _ _ _ 34 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 IKK IKK NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 alpha alpha NOUN NN Number=Sing _ _ _ _ 38 or or CCONJ CC _ _ _ _ _ 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 1416 # text = Overexpression of IKK complex-associated protein inhibited stimulus-mediated transcription, whereas NF-kappaB essential modulator enhanced it. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 IKK IKK PROPN NNP Number=Sing _ _ _ _ 4 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 stimulus stimulus ADV RB _ _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 whereas whereas SCONJ IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 18 essential essential ADJ JJ Degree=Pos _ _ _ _ 19 modulator modulator NOUN NN Number=Sing _ _ _ _ 20 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 it it PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1417 # text = The understanding of LPS- and TNF-induced signaling may allow the development of specific strategies to treat sepsis-associated disease. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 understanding understanding NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 TNF Tnf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 signaling signaling NOUN NN Number=Sing _ _ _ _ 11 may may AUX MD VerbForm=Fin _ _ _ _ 12 allow allow VERB VB VerbForm=Inf _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 development development NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 strategies strategy NOUN NNS Number=Plur _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 treat treat VERB VB VerbForm=Inf _ _ _ _ 20 sepsis- sepsis- PUNCT : _ _ _ _ SpaceAfter=No 21 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1418 # text = Document 003002513 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002513 003002513 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1419 # text = Extinction of immunoglobulin gene expression in B cells upon fusion with HeLa cells is preceded by rapid nuclear depletion of essential transcription factors and is accompanied by widespread inactivation of genes expressed in a B cell-specific manner. 1 Extinction extinction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 B b ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 upon upon ADP IN _ _ _ _ _ 10 fusion fusion NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 preceded preced VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 depletion depletion NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 essential essential ADJ JJ Degree=Pos _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 factors factor NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 widespread widespread ADJ JJ Degree=Pos _ _ _ _ 29 inactivation inactivation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 genes gene NOUN NNS Number=Plur _ _ _ _ 32 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 B b PROPN NNP Number=Sing _ _ _ _ 36 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 38 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1420 # text = When immunoglobulin 1 When when ADV WRB PronType=Int _ _ _ _ 2 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ # sent_id = 1421 # text = (Ig) expressing B cells are fused with non-B cells, Ig expression is rapidly suppressed at the level of transcription, a phenomenon termed extinction. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 Ig ig X ADD _ _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 expressing express VERB VBG VerbForm=Ger _ _ _ _ 5 B b ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 fused fuse VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 non non X AFX _ _ _ _ SpaceAfter=No 11 -B -b ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 Ig ig PROPN NNP Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 rapidly rapidly ADV RB _ _ _ _ _ 18 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 at at ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 level level NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 phenomenon phenomenon NOUN NN Number=Sing _ _ _ _ 27 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 extinction extinction NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1422 # text = Here we demonstrate that fusion of HeLa cells with either diploid or tetraploid B cells (Daudi) results in widespread extinction of several other B cell-encoded genes that are expressed in a B cell-specific manner. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 fusion fusion NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 HeLa Hela PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 either either CCONJ CC _ _ _ _ _ 11 diploid diploid ADJ JJ Degree=Pos _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 tetraploid tetraploid ADJ JJ Degree=Pos _ _ _ _ 14 B b ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 Daudi Daudi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 results result NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 widespread widespread ADJ JJ Degree=Pos _ _ _ _ 22 extinction extinction NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 several several ADJ JJ Degree=Pos _ _ _ _ 25 other other ADJ JJ Degree=Pos _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 cell cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 genes gene NOUN NNS Number=Plur _ _ _ _ 31 that that PRON WDT PronType=Rel _ _ _ _ 32 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 B b PROPN NNP Number=Sing _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 specific specific ADJ JJ Degree=Pos _ _ _ _ 40 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 1423 # text = In contrast, expression of B cell-expressed genes that are not dependent on cell-specific controls is unaffected. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 B b ADJ JJ Degree=Pos _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 specific specific ADJ JJ Degree=Pos _ _ _ _ 19 controls controls NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 unaffected unaffected ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1424 # text = We show that the molecular mechanism(s) underlying Ig gene extinction can be explained, at least in part, by a lack of transcription factors that are essential for Ig gene transcription. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 6 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 s s X AFX _ _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 underlying underly ADJ JJ Degree=Pos _ _ _ _ 11 Ig ig NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 extinction extinction NOUN NN Number=Sing _ _ _ _ 14 can can AUX MD VerbForm=Fin _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 explained explain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 at at ADV RB _ _ _ _ _ 19 least least ADV RBS Degree=Sup _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 part part ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 lack lack NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 factors factor NOUN NNS Number=Plur _ _ _ _ 29 that that PRON WDT PronType=Rel _ _ _ _ 30 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 essential essential ADJ JJ Degree=Pos _ _ _ _ 32 for for SCONJ IN _ _ _ _ _ 33 Ig ig VERB VBG VerbForm=Ger _ _ _ _ 34 gene gene ADJ JJ Degree=Pos _ _ _ _ 35 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 1425 # text = These transcription factors are either not produced due to block of transcription of their respective genes (Oct-2, OBF-1, PU.1), or are rendered inactive posttranslationally (NF-kappa B, E47). 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 either either CCONJ CC _ _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 due due ADP IN _ _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 block block NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 respective respective ADJ JJ Degree=Pos _ _ _ _ 16 genes gene NOUN NNS Number=Plur _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 -2 -2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 OBF OBF NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 PU.1 PU.1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 rendered render VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 32 posttranslationally posttranslationally ADV RB _ _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 kappa kappa NOUN NN Number=Sing _ _ _ _ 37 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 E47 E47 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 1426 # text = By isolating Daudi x 1 By by SCONJ IN _ _ _ _ _ 2 isolating isolate VERB VBG VerbForm=Ger _ _ _ _ 3 Daudi Daudi PROPN NNP Number=Sing _ _ _ _ 4 x x NOUN NN Number=Sing _ _ _ _ # sent_id = 1427 # text = HeLa heterokaryons a few hours after fusion, we have studied the initial fate of two B cell-specific transcription factors involved in Ig gene transcription, Oct-2 and NF-kappa B. 1 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 2 heterokaryons heterokaryon VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 few few ADJ JJ Degree=Pos _ _ _ _ 5 hours hour NOUN NNS Number=Plur _ _ _ _ 6 after after ADP IN _ _ _ _ _ 7 fusion fusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 10 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 studied studie VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 initial initial ADJ JJ Degree=Pos _ _ _ _ 14 fate fate NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 two two NUM CD NumType=Card _ _ _ _ 17 B b ADJ JJ Degree=Pos _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 specific specific ADJ JJ Degree=Pos _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ _ 23 involved involved ADJ JJ Degree=Pos _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 Ig ig PROPN NNP Number=Sing _ _ _ _ 26 gene gene PROPN NNP Number=Sing _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 kappa kappa NOUN NN Number=Sing _ _ _ _ 36 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 1428 # text = This report provides the first demonstration that upon fusion with HeLa cells, the nuclear contents of B cell-expressed transcription factors are depleted within a few hours with kinetics that are as fast or faster than that of Ig gene extinction. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 report report NOUN NN Number=Sing _ _ _ _ 3 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 6 demonstration demonstration NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 upon upon ADP IN _ _ _ _ _ 9 fusion fusion NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 contents contents NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 expressed expressed VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 factors factor NOUN NNS Number=Plur _ _ _ _ 24 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 depleted deplet VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 within within ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 few few ADJ JJ Degree=Pos _ _ _ _ 29 hours hour NOUN NNS Number=Plur _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 32 that that PRON WDT PronType=Rel _ _ _ _ 33 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 as as ADV RB _ _ _ _ _ 35 fast fast ADJ JJ Degree=Pos _ _ _ _ 36 or or CCONJ CC _ _ _ _ _ 37 faster faster ADJ JJR Degree=Cmp _ _ _ _ 38 than than ADP IN _ _ _ _ _ 39 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 Ig ig ADJ JJ Degree=Pos _ _ _ _ 42 gene gene NOUN NN Number=Sing _ _ _ _ 43 extinction extinction NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 1429 # text = Thus, the extinguishing mechanism is effective very early after fusion. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 extinguishing extinguishing NOUN NN Number=Sing _ _ _ _ 5 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 effective effective ADJ JJ Degree=Pos _ _ _ _ 8 very very ADV RB _ _ _ _ _ 9 early early ADV RB Degree=Pos _ _ _ _ 10 after after ADP IN _ _ _ _ _ 11 fusion fusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 1430 # text = We suggest that extinction of Ig genes is part of a global mechanism that suppresses the differentiation program foreign to the HeLa phenotype. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 extinction extinction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 Ig ig ADJ JJ Degree=Pos _ _ _ _ 7 genes gene NOUN NNS Number=Plur _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 part part NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 global global ADJ JJ Degree=Pos _ _ _ _ 13 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 suppresses suppress VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 18 program program NOUN NN Number=Sing _ _ _ _ 19 foreign foreign ADJ JJ Degree=Pos _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 23 phenotype phenotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1431 # text = Document 003002514 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002514 003002514 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1432 # text = Sequential development of structural and functional alterations in T cells from tumor-bearing mice. 1 Sequential Sequential ADJ JJ Degree=Pos _ _ _ _ 2 development development NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 structural structural ADJ JJ Degree=Pos _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 functional functional ADJ JJ Degree=Pos _ _ _ _ 7 alterations alteration NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 tumor tumor NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 bearing bearing VERB VBG VerbForm=Ger _ _ _ _ 15 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1433 # text = The TCR alpha beta or -gamma delta chains bind the peptide ligand, whereas the associated CD3 deltaepsilongamma and TCR zeta subunits couple the TCR to intracellular signal transduction components. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 TCR Tcr NOUN NN Number=Sing _ _ _ _ 3 alpha alpha ADP IN _ _ _ _ _ 4 beta beta NOUN NN Number=Sing _ _ _ _ 5 or or CCONJ CC _ _ _ _ _ 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 gamma gamma NOUN NN Number=Sing _ _ _ _ 8 delta delta NOUN NN Number=Sing _ _ _ _ 9 chains chain NOUN NNS Number=Plur _ _ _ _ 10 bind bind ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 peptide peptide NOUN NN Number=Sing _ _ _ _ 13 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 whereas whereas SCONJ IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 19 deltaepsilongamma deltaepsilongamma NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 TCR Tcr NOUN NN Number=Sing _ _ _ _ 22 zeta zeta NOUN NN Number=Sing _ _ _ _ 23 subunits subunit NOUN NNS Number=Plur _ _ _ _ 24 couple couple NOUN NN Number=Sing _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 TCR Tcr NOUN NN Number=Sing _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 29 signal signal NOUN NN Number=Sing _ _ _ _ 30 transduction transduction NOUN NN Number=Sing _ _ _ _ 31 components component NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1434 # text = Recently, several groups have described marked alterations in signal transduction elements in T cells from cancer patients or in mice bearing tumor for a few weeks (>26 days). 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 several several ADJ JJ Degree=Pos _ _ _ _ 4 groups group NOUN NNS Number=Plur _ _ _ _ 5 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 alterations alteration NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 signal signal ADJ JJ Degree=Pos _ _ _ _ 11 transduction transduction NOUN NN Number=Sing _ _ _ _ 12 elements element NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 from from ADP IN _ _ _ _ _ 17 cancer cancer NOUN NN Number=Sing _ _ _ _ 18 patients patient NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 mice mouse NOUN NNS Number=Plur _ _ _ _ 22 bearing bear VERB VBG VerbForm=Ger _ _ _ _ 23 tumor tumor NOUN NN Number=Sing _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 few few ADJ JJ Degree=Pos _ _ _ _ 27 weeks week NOUN NNS Number=Plur _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 >26 >26 NUM CD NumType=Card _ _ _ _ 30 days day NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1435 # text = The sequence in which these alterations develop is unknown. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 sequence sequence NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 alterations alteration NOUN NNS Number=Plur _ _ _ _ 7 develop develop VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 1436 # text = The aim of this study was to explore the kinetics of the development of alterations in signal transduction molecules (TCR zeta chain, NF kappaB family proteins, and tyrosine kinase p56(lck)) in mice bearing MC38 colon adenocarcinoma. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 aim aim NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 study study NOUN NN Number=Sing _ _ _ _ 6 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 explore explore VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 development development NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 alterations alteration NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 signal signal ADJ JJ Degree=Pos _ _ _ _ 18 transduction transduction NOUN NN Number=Sing _ _ _ _ 19 molecules molecule NOUN NNS Number=Plur _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 TCR Tcr NOUN NN Number=Sing _ _ _ _ 22 zeta zeta NOUN NN Number=Sing _ _ _ _ 23 chain chain NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ _ 26 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 27 family family NOUN NN Number=Sing _ _ _ _ 28 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 32 kinase kinase NOUN NN Number=Sing _ _ _ _ 33 p56 p56 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 lck lck NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 mice mouse NOUN NNS Number=Plur _ _ _ _ 40 bearing bear VERB VBG VerbForm=Ger _ _ _ _ 41 MC38 MC38 NUM CD NumType=Card _ _ _ _ 42 colon colon NOUN NN Number=Sing _ _ _ _ 43 adenocarcinoma adenocarcinoma NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 1437 # text = The results demonstrate that alterations in NF kappaB family proteins, specifically the failure of p65 translocation to the nucleus, occur earlier and more frequently than the decrease in zeta-chain. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 alterations alteration NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ _ 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 family family NOUN NN Number=Sing _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 specifically specifically ADV RB _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 failure failure NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 p65 p65 NUM CD NumType=Card _ _ _ _ 17 translocation translocation NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 occur occur VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 earlier earlier ADV RBR Degree=Cmp _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 more more ADV RBR _ _ _ _ _ 26 frequently frequently ADV RB _ _ _ _ _ 27 than than ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 decrease decrease NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 zeta zeta NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 chain chain NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1438 # text = These defects are paralleled by an impaired ability to produce Th1 cytokines (IL-2 and IFN-gamma). 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 defects defects NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 paralleled parallel VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 impaired impaire ADJ JJ Degree=Pos _ _ _ _ 8 ability ability NOUN NN Number=Sing _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 produce produce VERB VB VerbForm=Inf _ _ _ _ 11 Th1 Th1 NUM CD NumType=Card _ _ _ _ 12 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1439 # text = These initial changes are followed by the eventual loss of TCR zeta chain and p56(lck) and a marked decrease in cytotoxic function. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 initial initial ADJ JJ Degree=Pos _ _ _ _ 3 changes change NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 followed follow VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 eventual eventual ADJ JJ Degree=Pos _ _ _ _ 9 loss loss NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 TCR Tcr NOUN NN Number=Sing _ _ _ _ 12 zeta zeta NOUN NN Number=Sing _ _ _ _ 13 chain chain NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 p56 p56 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 lck lck NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 decrease decrease NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 cytotoxic cytotoxic ADJ JJ Degree=Pos _ _ _ _ 25 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1440 # text = An increased rate of lysosomal degradation is one of the mechanisms responsible for the loss of zeta-chain. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 rate rate NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 lysosomal lysosomal ADJ JJ Degree=Pos _ _ _ _ 6 degradation degradation NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 one one NUM CD NumType=Card _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 12 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 loss loss NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 zeta zeta NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 chain chain NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1441 # text = Document 003002520 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002520 003002520 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1442 # text = Thymocytes control the CD4 gene differently from mature T lymphocytes. 1 Thymocytes Thymocyte NOUN NNS Number=Plur _ _ _ _ 2 control control VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 differently differently ADV RB _ _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 mature mature ADJ JJ Degree=Pos _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1443 # text = We analyzed the activity of the enhancer, the promoter and the silencer of the human CD4 gene during T cell development using transgenic mice. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 activity activity NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 silencer silencer NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 CD4 Cd4 NOUN NN Number=Sing _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 during during ADP IN _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 development development NOUN NN Number=Sing _ _ _ _ 23 using use VERB VBG VerbForm=Ger _ _ _ _ 24 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 25 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1444 # text = Immunofluorescence studies on thymic populations of mice carrying transgenes in various combinations of these regulatory DNA elements revealed that thymocytes control the CD4 gene in a different manner than mature peripheral T lymphocytes. 1 Immunofluorescence Immunofluorescence NOUN NN Number=Sing _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 on on ADP IN _ _ _ _ _ 4 thymic thymic ADJ JJ Degree=Pos _ _ _ _ 5 populations population NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 mice mouse NOUN NNS Number=Plur _ _ _ _ 8 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 9 transgenes transgene NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 various various ADJ JJ Degree=Pos _ _ _ _ 12 combinations combination NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 15 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ _ 17 elements element NOUN NNS Number=Plur _ _ _ _ 18 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 21 control control VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 different different ADJ JJ Degree=Pos _ _ _ _ 28 manner manner NOUN NN Number=Sing _ _ _ _ 29 than than ADP IN _ _ _ _ _ 30 mature mature ADJ JJ Degree=Pos _ _ _ _ 31 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 32 T t NOUN NN Number=Sing _ _ _ _ 33 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1445 # text = The 5'-positive regulatory unit, consisting of the promoter and the 5' enhancer, is already active at the CD4-CD8-double-negative (DN) stage of development. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 ' ' NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 - - PUNCT : _ _ _ _ SpaceAfter=No 5 positive positive ADJ JJ Degree=Pos _ _ _ _ 6 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 7 unit unit NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 consisting consisting VERB VBG VerbForm=Ger _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ' 's PUNCT `` _ _ _ _ _ 17 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 already already ADV RB _ _ _ _ _ 21 active active ADJ JJ Degree=Pos _ _ _ _ 22 at at ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 CD4-CD8 CD4-CD8 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 negative negative ADJ JJ Degree=Pos _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 DN DN NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 stage stage NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1446 # text = However, its activity becomes lower in the double-positive and a fraction of the CD4+ CD8int/- cell population, indicating that an additional enhancer, located in either the first or the third intron of the CD4 gene, is required for CD4 gene expression in this population. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 4 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 becomes become VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 lower lower ADJ JJR Degree=Cmp _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 positive positive ADJ JJ Degree=Pos _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 fraction fraction NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 + + SYM SYM _ _ _ _ _ 20 CD8int CD8int ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 /- /- PUNCT . _ _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 population population NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 additional additional ADJ JJ Degree=Pos _ _ _ _ 29 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 either either CCONJ CC _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 36 or or CCONJ CC _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 third third ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 39 intron intron NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 43 gene gene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 46 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 47 for for ADP IN _ _ _ _ _ 48 CD4 CD4 NUM CD NumType=Card _ _ _ _ 49 gene gene ADJ JJ Degree=Pos _ _ _ _ 50 expression expression NOUN NN Number=Sing _ _ _ _ 51 in in ADP IN _ _ _ _ _ 52 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 53 population population NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 1447 # text = The other studied regulatory element is the minimal CD4 silencer which inhibits CD4 gene expression in peripheral CD8 T lymphocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 other other ADJ JJ Degree=Pos _ _ _ _ 3 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 5 element element NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 9 CD4 Cd4 NOUN NN Number=Sing _ _ _ _ 10 silencer silencer NOUN NN Number=Sing _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 CD4 CD4 NUM CD NumType=Card _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 18 CD8 CD8 PROPN NNP Number=Sing _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1448 # text = This silencer is inactive in the most immature DN thymocytes, which probably use a distinct silencer mechanism to down-regulate CD4 gene expression. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 silencer silencer NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 most most ADV RBS _ _ _ _ _ 8 immature immature ADJ JJ Degree=Pos _ _ _ _ 9 DN Dn NOUN NN Number=Sing _ _ _ _ 10 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 probably probably ADV RB _ _ _ _ _ 14 use use VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 17 silencer silencer NOUN NN Number=Sing _ _ _ _ 18 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 down down ADV RB _ _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 regulate regulate ADJ JJ Degree=Pos _ _ _ _ 23 CD4 Cd4 NOUN NN Number=Sing _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1449 # text = Unexpectedly, the CD4 silencer is also active in CD4+ CD8int/- cells of the thymus, implying that an anti-silencer may be required to resume CD4 expression in this cell population. 1 Unexpectedly unexpectedly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 5 silencer silencer NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 active active ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 + + SYM SYM _ _ _ _ _ 12 CD8int CD8int NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 /- /- PUNCT . _ _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 thymus thymus NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 implying imply VERB VBG VerbForm=Ger _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 anti-silencer anti-silencer NOUN NN Number=Sing _ _ _ _ 23 may may AUX MD VerbForm=Fin _ _ _ _ 24 be be AUX VB VerbForm=Inf _ _ _ _ 25 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 resume resume VERB VB VerbForm=Inf _ _ _ _ 28 CD4 CD4 NUM CD NumType=Card _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 population population NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1450 # text = Altogether, the CD4 gene is regulated by several positive and negative regulatory mechanisms which come into play in a developmentally coordinated manner. 1 Altogether altogether ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 5 gene gene PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 several several ADJ JJ Degree=Pos _ _ _ _ 10 positive positive ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 negative negative ADJ JJ Degree=Pos _ _ _ _ 13 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 14 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 come come VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 into into ADP IN _ _ _ _ _ 18 play play NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 developmentally developmentally ADV RB _ _ _ _ _ 22 coordinated coordinate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1451 # text = Document 003002530 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002530 003002530 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1452 # text = Globin gene switching. 1 Globin Globin PROPN NNP Number=Sing _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 switching switching VERB VBG Tense=Pres|VerbForm=Part _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ _ # sent_id = 1453 # text = In vivo protein-DNA interactions of the human beta-globin locus in erythroid cells expressing the fetal or the adult globin gene program. 1 In in ADP IN _ _ _ _ _ 2 vivo vivo NOUN NN Number=Sing _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 DNA dna NOUN NN Number=Sing _ _ _ _ 6 interactions interaction NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 globin globin NOUN NN Number=Sing _ _ _ _ 13 locus locus NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 expressing express VERB VBG VerbForm=Ger _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 adult adult ADJ JJ Degree=Pos _ _ _ _ 23 globin globin NOUN NN Number=Sing _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 program program NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1454 # text = To characterize the protein-DNA interactions important for the developmental control of the human beta-globin locus, we analyzed by in vivo dimethyl sulfate footprinting erythroid cells expressing either the fetal or the adult globin developmental program. 1 To to PART TO _ _ _ _ _ 2 characterize characterize VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 DNA dna NOUN NN Number=Sing _ _ _ _ 7 interactions interaction NOUN NNS Number=Plur _ _ _ _ 8 important important ADJ JJ Degree=Pos _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 12 control control NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 globin globin NOUN NN Number=Sing _ _ _ _ 19 locus locus NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 22 analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 vivo vivo NOUN NN Number=Sing _ _ _ _ 26 dimethyl dimethyl NOUN NN Number=Sing _ _ _ _ 27 sulfate sulfate NOUN NN Number=Sing _ _ _ _ 28 footprinting footprint VERB VBG VerbForm=Ger _ _ _ _ 29 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 32 either either CCONJ CC _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 35 or or CCONJ CC _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 adult adult NOUN NN Number=Sing _ _ _ _ 38 globin globin ADP IN _ _ _ _ _ 39 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 40 program program NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 1455 # text = In the locus control region (LCR) of the beta-globin locus, in vivo footprints on NF-E2 (or AP-1) and GATA-1 motifs remained the same regardless of whether the fetal or the adult globin genes are expressed. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 locus locus NOUN NN Number=Sing _ _ _ _ 4 control control NOUN NN Number=Sing _ _ _ _ 5 region region NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 LCR LCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 globin globin NOUN NN Number=Sing _ _ _ _ 14 locus locus NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 vivo vivo ADJ JJ Degree=Pos _ _ _ _ 18 footprints footprint NOUN NNS Number=Plur _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 -E2 -E2 NUM CD NumType=Card _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 or or CCONJ CC _ _ _ _ _ 24 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 X LS _ _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 motifs motif NOUN NNS Number=Plur _ _ _ _ 33 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 same same ADJ JJ Degree=Pos _ _ _ _ 36 regardless regardless ADV RB _ _ _ _ _ 37 of of SCONJ IN _ _ _ _ _ 38 whether whether SCONJ IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 41 or or CCONJ CC _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 adult adult ADJ JJ Degree=Pos _ _ _ _ 44 globin globin NOUN NN Number=Sing _ _ _ _ 45 genes gene NOUN NNS Number=Plur _ _ _ _ 46 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 47 expressed expressed ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 1456 # text = In contrast, in vivo footprints on GT (CACCC) motifs differed between the cells expressing the fetal or the adult globin program. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 vivo vivo ADJ JJ Degree=Pos _ _ _ _ 6 footprints footprint NOUN NNS Number=Plur _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 GT GT PROPN NNP Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 CACCC CACCC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 motifs motif NOUN NNS Number=Plur _ _ _ _ 13 differed differ VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 between between ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 expressing express VERB VBG VerbForm=Ger _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 adult adult ADJ JJ Degree=Pos _ _ _ _ 23 globin globin NOUN NN Number=Sing _ _ _ _ 24 program program NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1457 # text = In promoter regions, the actively transcribed genes demonstrated extensive and consistent footprints over the canonical elements, such as CACCC and CCAAT motifs. 1 In in ADP IN _ _ _ _ _ 2 promoter promoter ADJ JJ Degree=Pos _ _ _ _ 3 regions region NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 actively actively ADV RB _ _ _ _ _ 7 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 genes gene NOUN NNS Number=Plur _ _ _ _ 9 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 extensive extensive ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 13 footprints footprint NOUN NNS Number=Plur _ _ _ _ 14 over over ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 canonical canonical ADJ JJ Degree=Pos _ _ _ _ 17 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 such such ADJ JJ Degree=Pos _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 CACCC CACCC PROPN NNP Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 CCAAT Ccaat ADJ JJ Degree=Pos _ _ _ _ 24 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1458 # text = The adult globin expressing cells displayed more extensive footprints than the fetal globin expressing cells in the 3' regulatory sequences of both the Agamma- and the beta-globin genes, suggesting a role of these 3' elements in beta-globin gene expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 adult adult NOUN NN Number=Sing _ _ _ _ 3 globin globin NOUN NN Number=Sing _ _ _ _ 4 expressing express VERB VBG VerbForm=Ger _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 displayed display VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 more more ADV RBR _ _ _ _ _ 8 extensive extensive ADJ JJ Degree=Pos _ _ _ _ 9 footprints footprint NOUN NNS Number=Plur _ _ _ _ 10 than than ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 13 globin globin NOUN NN Number=Sing _ _ _ _ 14 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ' ' PUNCT `` _ _ _ _ _ 20 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 21 sequences sequence NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 both both CCONJ CC _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 Agamma Agamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 globin globin NOUN NN Number=Sing _ _ _ _ 32 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 role role NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 39 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 ' ' PUNCT '' _ _ _ _ _ 41 elements element NOUN NNS Number=Plur _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 globin globin NOUN NN Number=Sing _ _ _ _ 46 gene gene NOUN NN Number=Sing _ _ _ _ 47 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 1459 # text = Our results suggest that the bulk of protein-DNA interactions that underlies the developmental control of globin genes takes place in the gamma- and beta-globin gene promoters, and that GT motifs of the beta-globin locus LCR may play a role in the developmental regulation of human beta-globin gene expression, perhaps by increasing the probability of interaction of the LCR holocomplex with the fetal or the adult globin gene. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 bulk bulk NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 DNA dna NOUN NN Number=Sing _ _ _ _ 11 interactions interaction NOUN NNS Number=Plur _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 underlies underly VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 16 control control NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 globin globin ADJ JJ Degree=Pos _ _ _ _ 19 genes gene NOUN NNS Number=Plur _ _ _ _ 20 takes take VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 place place NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 globin globin NOUN NN Number=Sing _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ _ 31 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 that that SCONJ IN _ _ _ _ _ 35 GT Gt NOUN NN Number=Sing _ _ _ _ 36 motifs motif NOUN NNS Number=Plur _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 globin globin NOUN NN Number=Sing _ _ _ _ 42 locus locus NOUN NN Number=Sing _ _ _ _ 43 LCR Lcr PROPN NNP Number=Sing _ _ _ _ 44 may may AUX MD VerbForm=Fin _ _ _ _ 45 play play VERB VB VerbForm=Inf _ _ _ _ 46 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 47 role role NOUN NN Number=Sing _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 51 regulation regulation NOUN NN Number=Sing _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 human human ADJ JJ Degree=Pos _ _ _ _ 54 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 56 globin globin NOUN NN Number=Sing _ _ _ _ 57 gene gene NOUN NN Number=Sing _ _ _ _ 58 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 , , PUNCT , _ _ _ _ _ 60 perhaps perhaps ADV RB _ _ _ _ _ 61 by by SCONJ IN _ _ _ _ _ 62 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 63 the the DET DT Definite=Def|PronType=Art _ _ _ _ 64 probability probability NOUN NN Number=Sing _ _ _ _ 65 of of ADP IN _ _ _ _ _ 66 interaction interaction NOUN NN Number=Sing _ _ _ _ 67 of of ADP IN _ _ _ _ _ 68 the the DET DT Definite=Def|PronType=Art _ _ _ _ 69 LCR LCR PROPN NNP Number=Sing _ _ _ _ 70 holocomplex holocomplex NOUN NN Number=Sing _ _ _ _ 71 with with ADP IN _ _ _ _ _ 72 the the DET DT Definite=Def|PronType=Art _ _ _ _ 73 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 74 or or CCONJ CC _ _ _ _ _ 75 the the DET DT Definite=Def|PronType=Art _ _ _ _ 76 adult adult NOUN NN Number=Sing _ _ _ _ 77 globin globin ADP IN _ _ _ _ _ 78 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 79 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1460 # text = Document 003002536 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002536 003002536 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1461 # text = Differential regulation of 4E-BP1 and 4E-BP2, two repressors of translation initiation, during human myeloid cell differentiation. 1 Differential differential ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 4E 4E PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 BP1 BP1 PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 4E 4e PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 BP2 Bp2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 two two NUM CD NumType=Card _ _ _ _ 13 repressors repressor NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 translation translation NOUN NN Number=Sing _ _ _ _ 16 initiation initiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 during during ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1462 # text = Human myeloid differentiation is accompanied by a decrease in cell proliferation. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 3 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 decrease decrease NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 1463 # text = Because the translation rate is an important determinant of cell proliferation, we have investigated translation initiation during human myeloid cell differentiation using the HL-60 promyelocytic leukemia cell line and the U-937 monoblastic cell line. 1 Because because SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 translation translation NOUN NN Number=Sing _ _ _ _ 4 rate rate NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 important important ADJ JJ Degree=Pos _ _ _ _ 8 determinant determinant NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 translation translation NOUN NN Number=Sing _ _ _ _ 17 initiation initiation NOUN NN Number=Sing _ _ _ _ 18 during during ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 23 using use VERB VBG VerbForm=Ger _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 HL HL NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 60 60 NUM CD NumType=Card _ _ _ _ 28 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ _ 29 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 line line NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - SYM SYM _ _ _ _ SpaceAfter=No 36 937 937 NUM CD NumType=Card _ _ _ _ 37 monoblastic monoblastic ADJ JJ Degree=Pos _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1464 # text = A decrease in the translation rate is observed when the cells are induced to differentiate along the monocytic/macrophage pathway or along the granulocytic pathway. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 decrease decrease NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 translation translation NOUN NN Number=Sing _ _ _ _ 6 rate rate NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 when when ADV WRB PronType=Int _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 differentiate differentiate VERB VB VerbForm=Inf _ _ _ _ 16 along along ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 monocytic monocytic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 20 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 21 pathway pathway NOUN NN Number=Sing _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 along along ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 26 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1465 # text = The inhibition in protein synthesis correlates with specific regulation of two repressors of translation initiation, 4E-BP1 and 4E-BP2. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 6 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 regulation regulation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 two two NUM CD NumType=Card _ _ _ _ 12 repressors repressor NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 translation translation NOUN NN Number=Sing _ _ _ _ 15 initiation initiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 4E 4e NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 BP1 Bp1 NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 4E 4e NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 BP2 Bp2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1466 # text = Induction of HL-60 and U-937 cell differentiation into monocytes/macrophages by IFN-gamma or PMA results in a dephosphorylation and consequent activation of 4E-BP1. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 60 60 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 937 937 NUM CD NumType=Card _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 12 into into ADP IN _ _ _ _ _ 13 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 gamma gamma PROPN NNP Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 PMA Pma PROPN NNP Number=Sing _ _ _ _ 22 results result NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 dephosphorylation dephosphorylation NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 consequent consequent ADJ JJ Degree=Pos _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 4E 4E PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 BP1 BP1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1467 # text = Dephosphorylation of 4E-BP1 was also observed when U-937 cells were induced to differentiate into monocytes/macrophages following treatment with retinoic acid or DMSO. 1 Dephosphorylation Dephosphorylation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 4E 4E PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 BP1 BP1 PROPN NNP Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 when when ADV WRB PronType=Int _ _ _ _ 10 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 937 937 NUM CD NumType=Card _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 differentiate differentiate VERB VB VerbForm=Inf _ _ _ _ 18 into into ADP IN _ _ _ _ _ 19 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 22 following follow VERB VBG VerbForm=Ger _ _ _ _ 23 treatment treatment NOUN NN Number=Sing _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 26 acid acid NOUN NN Number=Sing _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 DMSO DMSO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1468 # text = In contrast, treatment of HL-60 cells with retinoic acid or DMSO, which results in a granulocytic differentiation of these cells, decreases 4E-BP1 amount without affecting its phosphorylation and strongly increases 4E-BP2 amount. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 treatment treatment NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 60 60 NUM CD NumType=Card _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 12 acid acid NOUN NN Number=Sing _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 DMSO Dmso PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 which which DET WDT PronType=Int _ _ _ _ 17 results result NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 21 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 decreases decrease VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 4E 4e PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 BP1 Bp1 PROPN NNP Number=Sing _ _ _ _ 30 amount amount NOUN NN Number=Sing _ _ _ _ 31 without without SCONJ IN _ _ _ _ _ 32 affecting affect VERB VBG VerbForm=Ger _ _ _ _ 33 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 34 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 strongly strongly ADV RB _ _ _ _ _ 37 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 4E 4e NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 BP2 Bp2 NUM CD NumType=Card _ _ _ _ 41 amount amount NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 1469 # text = Taken together, these data provide evidence for differential regulation of the translational machinery during human myeloid differentiation, specific to the monocytic/macrophage pathway or to the granulocytic pathway. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 data data NOUN NN Number=Sing _ _ _ _ 6 provide provide VERB VB VerbForm=Inf _ _ _ _ 7 evidence evidence NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 differential differential ADJ JJ Degree=Pos _ _ _ _ 10 regulation regulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 translational translational ADJ JJ Degree=Pos _ _ _ _ 14 machinery machinery NOUN NN Number=Sing _ _ _ _ 15 during during ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 18 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 specific specific ADJ JJ Degree=Pos _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 monocytic monocytic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 25 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 26 pathway pathway NOUN NN Number=Sing _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 31 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1470 # text = Document 003002537 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002537 003002537 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1471 # text = Regulatory effects of interleukin-11 during acute lung inflammatory injury. 1 Regulatory Regulatory ADJ JJ Degree=Pos _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 11 11 NUM CD NumType=Card _ _ _ _ 7 during during ADP IN _ _ _ _ _ 8 acute acute ADJ JJ Degree=Pos _ _ _ _ 9 lung lung NOUN NN Number=Sing _ _ _ _ 10 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 11 injury injury NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1472 # text = The role of interleukin-11 (IL-11) was evaluated in the IgG immune complex model of acute lung injury in rats. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 interleukin interleukin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 -11 -11 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 11 11 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 evaluated evaluate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 IgG IgG PROPN NNP Number=Sing _ _ _ _ 16 immune immune ADJ JJ Degree=Pos _ _ _ _ 17 complex complex ADJ JJ Degree=Pos _ _ _ _ 18 model model NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 acute acute ADJ JJ Degree=Pos _ _ _ _ 21 lung lung NOUN NN Number=Sing _ _ _ _ 22 injury injury NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 rats rat NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1473 # text = IL-11 mRNA and protein were both up-regulated during the course of this inflammatory response. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 11 11 NUM CD NumType=Card _ _ _ _ 4 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 both both ADV RB _ _ _ _ _ 9 up up ADV RB _ _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 during during ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 course course NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 17 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 18 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1474 # text = Exogenously administered IL-11 substantially reduced, in a dose-dependent manner, the intrapulmonary accumulation of neutrophils and the lung vascular leak of albumin. 1 Exogenously Exogenously ADV RB _ _ _ _ _ 2 administered administer VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - SYM SYM _ _ _ _ SpaceAfter=No 5 11 11 NUM CD NumType=Card _ _ _ _ 6 substantially substantially ADV RB _ _ _ _ _ 7 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 14 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 intrapulmonary intrapulmonary ADJ JJ Degree=Pos _ _ _ _ 18 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 lung lung ADJ JJ Degree=Pos _ _ _ _ 24 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 25 leak leak NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 albumin albumin NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1475 # text = These in vivo anti-inflammatory effects of IL-11 were associated with reduced NF-kappaB activation in lung, reduced levels of tumor necrosis factor alpha (TNF-alpha) in bronchoalveolar lavage (BAL) fluids, and diminished up-regulation of lung vascular ICAM-1. 1 These these PRON DT Number=Plur|PronType=Dem _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 vivo vivo ADJ JJ Degree=Pos _ _ _ _ 4 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 11 11 NUM CD NumType=Card _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 lung lung NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 levels level NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 tumor tumor NOUN NN Number=Sing _ _ _ _ 25 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ _ 27 alpha alpha NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 bronchoalveolar bronchoalveolar ADJ JJ Degree=Pos _ _ _ _ 35 lavage lavage NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 BAL Bal NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 fluids fluid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 diminished diminish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 up up ADP RP _ _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 regulation regulation NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 lung lung ADJ JJ Degree=Pos _ _ _ _ 48 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 49 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 1476 # text = It is interesting that IL-11 did not affect BAL fluid content of the CXC chemokines, macrophage inflammatory protein-2 (MIP-2) and cytokine-inducible neutrophil chemoattractant (CINC); the presence of IL-11 did not affect these chemokines. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 interesting interesting ADJ JJ Degree=Pos _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 11 11 NUM CD NumType=Card _ _ _ _ 8 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 affect affect VERB VB VerbForm=Inf _ _ _ _ 11 BAL Bal ADJ JJ Degree=Pos _ _ _ _ 12 fluid fluid NOUN NN Number=Sing _ _ _ _ 13 content content NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 CXC CXC NOUN NN Number=Sing _ _ _ _ 17 chemokines chemokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 macrophage macrophage ADJ JJ Degree=Pos _ _ _ _ 20 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 MIP Mip NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 X LS _ _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 cytokine cytokine VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 31 -inducible -inducible ADJ JJ Degree=Pos _ _ _ _ 32 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 33 chemoattractant chemoattractant NOUN NN Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 CINC CINC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 ; ; PUNCT , _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 presence presence NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 11 11 NUM CD NumType=Card _ _ _ _ 44 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 45 not not PART RB _ _ _ _ _ 46 affect affect VERB VB VerbForm=Inf _ _ _ _ 47 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 48 chemokines chemokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 1477 # text = However, BAL content of C5a was reduced by IL-11. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 BAL Bal ADJ NNP Number=Sing _ _ _ _ 4 content content NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 C5 C5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 11 11 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 1478 # text = These data indicate that IL-11 is a regulatory cytokine in the lung and that, like other members of this family, its anti-inflammatory properties appear to be linked to its suppression of NF-kappaB activation, diminished production of TNF-alpha, and reduced up-regulation of lung vascular ICAM-1. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 11 11 NUM CD NumType=Card _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 11 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 lung lung NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 like like ADP IN _ _ _ _ _ 19 other other ADJ JJ Degree=Pos _ _ _ _ 20 members member NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 23 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 26 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 27 properties property NOUN NNS Number=Plur _ _ _ _ 28 appear appear VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 to to PART TO _ _ _ _ _ 30 be be AUX VB VerbForm=Inf _ _ _ _ 31 linked link VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 34 suppression suppression NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 39 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 diminished diminish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 production production NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 up up ADP RP _ _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 regulation regulation NOUN NN Number=Sing _ _ _ _ 53 of of ADP IN _ _ _ _ _ 54 lung lung ADJ JJ Degree=Pos _ _ _ _ 55 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 56 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1479 # text = Document 003002 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002 003002 NUM CD NumType=Card _ _ _ SpaceAfter=No # sent_id = 1480 # text = 544 ends. 1 544 544 NUM CD NumType=Card _ _ _ _ 2 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1481 # text = v-erbA overexpression is required to extinguish c-erbA function in erythroid cell differentiation and regulation of the erbA target gene CAII. 1 v- v- SYM NFP _ _ _ _ SpaceAfter=No 2 erbA erbA NOUN NN Number=Sing _ _ _ _ 3 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 extinguish extinguish VERB VB VerbForm=Inf _ _ _ _ 8 c- c- PUNCT , _ _ _ _ SpaceAfter=No 9 erbA erba DET DT Definite=Ind|PronType=Art _ _ _ _ 10 function function NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 regulation regulation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 erbA erbA PROPN NNP Number=Sing _ _ _ _ 20 target target NOUN NN Number=Sing _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 CAII caii NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1482 # text = The v-erbA oncoprotein represents a retrovirus-transduced oncogenic version of the thyroid hormone (T3/T4) receptor c-erbA (type alpha). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 v- v- SYM NFP _ _ _ _ SpaceAfter=No 3 erbA erbA PROPN NNP Number=Sing _ _ _ _ 4 oncoprotein oncoprotein ADV RB _ _ _ _ _ 5 represents represent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 retrovirus retrovirus NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 transduced transduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 oncogenic oncogenic ADJ JJ Degree=Pos _ _ _ _ 11 version version NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 thyroid thyroid NOUN NN Number=Sing _ _ _ _ 15 hormone hormone NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 T3/ T3/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 T4 T4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ _ 21 c- c- PUNCT : _ _ _ _ SpaceAfter=No 22 erbA erbA PROPN NNP Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 type type NOUN NN Number=Sing _ _ _ _ 25 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1483 # text = It contributes to virus-induced erythroleukemia by efficiently arresting differentiation of red cell progenitors and by suppressing transcription of erythrocyte-specific genes. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 contributes contribute VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 virus virus VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 erythroleukemia erythroleukemia NOUN NN Number=Sing _ _ _ _ 8 by by SCONJ IN _ _ _ _ _ 9 efficiently efficiently ADV RB _ _ _ _ _ 10 arresting arreste VERB VBG VerbForm=Ger _ _ _ _ 11 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 red red ADJ JJ Degree=Pos _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 progenitors progenitor NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 by by SCONJ IN _ _ _ _ _ 18 suppressing suppresse VERB VBG VerbForm=Ger _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 erythrocyte-specific erythrocyte-specific ADJ JJ Degree=Pos _ _ _ _ 22 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1484 # text = Here, we show that v-erbA and c-erbA bind directly to sequences within the promoter of the erythrocyte-specific carbonic anhydrase II (CAII), a gene whose transcription is efficiently suppressed by v-erbA. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 v- v- SYM NFP _ _ _ _ SpaceAfter=No 7 erbA erbA PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 c- c- SYM NFP _ _ _ _ SpaceAfter=No 10 erbA erbA DET DT Definite=Ind|PronType=Art _ _ _ _ 11 bind bind NOUN NN Number=Sing _ _ _ _ 12 directly directly ADV RB _ _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 sequences sequence NOUN NNS Number=Plur _ _ _ _ 15 within within ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 erythrocyte- erythrocyte- SYM SYM _ _ _ _ SpaceAfter=No 21 specific specific ADJ JJ Degree=Pos _ _ _ _ 22 carbonic carbonic NOUN NN Number=Sing _ _ _ _ 23 anhydrase anhydrase NOUN NN Number=Sing _ _ _ _ 24 II ii NUM CD NumType=Card _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 CAII Caii NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ _ 31 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 32 transcription transcription NOUN NN Number=Sing _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 efficiently efficiently ADV RB _ _ _ _ _ 35 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 v- v- SYM NFP _ _ _ _ SpaceAfter=No 38 erbA erbA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 1485 # text = This erbA-binding site confers thyroid hormone responsiveness to a heterologous promoter in transient expression experiments and is a target for efficient down-regulation of CAII transcription by the v-erbA oncoprotein. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 erbA- erbA- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 binding bind VERB VBG VerbForm=Ger _ _ _ _ 4 site site NOUN NN Number=Sing _ _ _ _ 5 confers confer NOUN NNS Number=Plur _ _ _ _ 6 thyroid thyroid NOUN NN Number=Sing _ _ _ _ 7 hormone hormone NOUN NN Number=Sing _ _ _ _ 8 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 transient transient ADJ JJ Degree=Pos _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 experiments experiment NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 target target NOUN NN Number=Sing _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 23 down down NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 regulation regulation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 CAII Caii PROPN NNP Number=Sing _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 v- v- SYM NFP _ _ _ _ SpaceAfter=No 32 erbA erbA PROPN NNP Number=Sing _ _ _ _ 33 oncoprotein oncoprotein ADV RB _ _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1486 # text = In stably transformed erythroblasts coexpressing the v-erbA oncoprotein and the c-erbA/T3 receptor at an approximately equimolar ratio, c-erbA activity is dominant over v-erbA. 1 In in ADP IN _ _ _ _ _ 2 stably stably ADV RB _ _ _ _ _ 3 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 erythroblasts erythroblast NOUN NNS Number=Plur _ _ _ _ 5 coexpressing coexpresse VERB VBG VerbForm=Ger _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 v- v- SYM NFP _ _ _ _ SpaceAfter=No 8 erbA erbA PROPN NNP Number=Sing _ _ _ _ 9 oncoprotein oncoprotein PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 c- c- SYM SYM _ _ _ _ SpaceAfter=No 13 erbA/T3 erbA/T3 NUM CD NumType=Card _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 at at ADP IN _ _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 approximately approximately ADV RB _ _ _ _ _ 18 equimolar equimolar ADJ JJ Degree=Pos _ _ _ _ 19 ratio ratio NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 c- c- SYM NFP _ _ _ _ SpaceAfter=No 22 erbA erbA ADJ JJ Degree=Pos _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 26 over over ADP IN _ _ _ _ _ 27 v- v- SYM NFP _ _ _ _ SpaceAfter=No 28 erbA. erbA. PROPN NNP Number=Sing _ _ _ _ # sent_id = 1487 # text = T3 efficiently induced erythroid differentiation in these cells, thus overcoming the v-erbA-mediated differentiation arrest. 1 T3 T3 NUM CD NumType=Card _ _ _ _ 2 efficiently efficiently ADV RB _ _ _ _ _ 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 5 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 thus thus ADV RB _ _ _ _ _ 11 overcoming overcom VERB VBG VerbForm=Ger _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 v- v- SYM NFP _ _ _ _ SpaceAfter=No 14 erbA erbA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 18 arrest arrest NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1488 # text = Likewise, T3 activated CAII transcription as well as transient expression of a T3-responsive reporter gene containing the CAII-specific erbA-binding site. 1 Likewise likewise ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 T3 T3 NUM CD NumType=Card _ _ _ _ 4 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 CAII Caii NUM CD NumType=Card _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 as as ADV RB _ _ _ _ _ 8 well well ADV RB Degree=Pos _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 transient transient ADJ JJ Degree=Pos _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 T3 T3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 17 reporter reporter NOUN NN Number=Sing _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 containing contain VERB VBG VerbForm=Ger _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 CAII CAII PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 specific specific ADJ JJ Degree=Pos _ _ _ _ 24 erbA- erba- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 binding bind VERB VBG VerbForm=Ger _ _ _ _ 26 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1489 # text = The c-erbA-dependent activation of this CAII reporter construct could only be suppressed by very high amounts of v-erbA. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 c- c- SYM NFP _ _ _ _ SpaceAfter=No 3 erbA-dependent erbA-dependent ADJ JJ Degree=Pos _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 CAII CAII ADJ JJ Degree=Pos _ _ _ _ 8 reporter reporter NOUN NN Number=Sing _ _ _ _ 9 construct construct NOUN NN Number=Sing _ _ _ _ 10 could could AUX MD VerbForm=Fin _ _ _ _ 11 only only ADV RB _ _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 very very ADV RB _ _ _ _ _ 16 high high ADJ JJ Degree=Pos _ _ _ _ 17 amounts amount NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 v- v- SYM NFP _ _ _ _ SpaceAfter=No 20 erbA erbA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1490 # text = Our results suggest that overexpression of v-erbA is required for its function as an oncoprotein. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 v- v- PUNCT , _ _ _ _ SpaceAfter=No 8 erbA erbA PROPN NNP Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 function function NOUN NN Number=Sing _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 oncoprotein oncoprotein NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1491 # text = Document 003002548 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002548 003002548 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1492 # text = Differential induction of the NF-AT complex during restimulation and the induction of T-cell anergy. 1 Differential differential ADJ JJ Degree=Pos _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 AT AT ADJ JJ Degree=Pos _ _ _ _ 8 complex complex NOUN NN Number=Sing _ _ _ _ 9 during during ADP IN _ _ _ _ _ 10 restimulation restimulation NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 induction induction NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 anergy anergy NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1493 # text = Stimulation of human CD4+ T-cell clones through the T-cell receptor (TcR) by high doses of specific peptide results in the induction of a long-lived state of nonresponsiveness that has been called anergy. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 + + SYM SYM _ _ _ _ _ 6 T- T- SYM NFP _ _ _ _ SpaceAfter=No 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 clones clone NOUN NNS Number=Plur _ _ _ _ 9 through through ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 TcR TcR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 high high ADJ JJ Degree=Pos _ _ _ _ 19 doses dos NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 specific specific ADJ JJ Degree=Pos _ _ _ _ 22 peptide peptide NOUN NN Number=Sing _ _ _ _ 23 results result NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 induction induction NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 long long ADV RB Degree=Pos _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 lived live VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 state state NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 nonresponsiveness nonresponsiveness NOUN NN Number=Sing _ _ _ _ 35 that that PRON WDT PronType=Rel _ _ _ _ 36 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 38 called call VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 anergy anergy NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1494 # text = During the induction of anergy, T cells are phenotypically similar to cells responding to an immunogenic stimulus. 1 During during ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 induction induction NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 anergy anergy NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 T t NUM CD NumType=Card _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 phenotypically phenotypically ADV RB _ _ _ _ _ 11 similar similar ADJ JJ Degree=Pos _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 responding respond VERB VBG VerbForm=Ger _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 immunogenic immunogenic ADJ JJ Degree=Pos _ _ _ _ 18 stimulus stimulus NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1495 # text = The amount of TcR at the cell surface is downmodulated, whereas the CD2 and CD25 receptors are increased. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 amount amount NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 TcR TcR NOUN NN Number=Sing _ _ _ _ 5 at at ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 surface surface NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 downmodulated downmodulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 whereas whereas SCONJ IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 CD2 Cd2 NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 CD25 Cd25 NUM CD NumType=Card _ _ _ _ 17 receptors receptor NOUN NNS Number=Plur _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1496 # text = When restimulated, however, anergic T cells fail to up-regulate transcription of the IL-2 gene and in consequence do not produce IL-2. 1 When when ADV WRB PronType=Int _ _ _ _ 2 restimulated restimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 however however ADV RB _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 anergic anergic ADJ JJ Degree=Pos _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 fail fail VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 up up ADV RB _ _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 regulate regulate ADJ JJ Degree=Pos _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 consequence consequence NOUN NN Number=Sing _ _ _ _ 24 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 not not PART RB _ _ _ _ _ 26 produce produce VERB VB VerbForm=Inf _ _ _ _ 27 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1497 # text = In this study, we have compared the ability of various transcription factors to bind to their appropriate site on DNA. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 ability ability NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 various various ADJ JJ Degree=Pos _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factors factor NOUN NNS Number=Plur _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 bind bind VERB VB VerbForm=Inf _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 appropriate appropriate ADJ JJ Degree=Pos _ _ _ _ 19 site site NOUN NN Number=Sing _ _ _ _ 20 on on ADP IN _ _ _ _ _ 21 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1498 # text = Factors were isolated from the nuclei of T cells that were in the induction phase of anergy or were undergoing activation. 1 Factors factor NOUN NNS Number=Plur _ _ _ _ 2 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 isolated isolate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 induction induction NOUN NN Number=Sing _ _ _ _ 15 phase phase NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 anergy anergy NOUN NN Number=Sing _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 undergoing undergoing VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1499 # text = The pattern of binding activity in restimulated T cells is consistent with the pattern that has previously been shown to regulate T-cell-specific expression of the IL-2 and the beta chain of the TcR genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 pattern pattern NOUN NN Number=Sing _ _ _ _ 3 of of SCONJ IN _ _ _ _ _ 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 restimulated restimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 pattern pattern NOUN NN Number=Sing _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 previously previously ADV RB _ _ _ _ _ 18 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 19 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 22 T-cell T-cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 2 2 NUM CD NumType=Card _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 beta beta NOUN NN Number=Sing _ _ _ _ 34 chain chain NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 TcR Tcr NOUN NN Number=Sing _ _ _ _ 38 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 1500 # text = The measured binding to a TCF-1 site is the same in the nuclei of resting, activated, and anergized cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 measured measure VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 binding binding VERB VBG VerbForm=Ger _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 TCF TCF NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 site site NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 same same ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 resting resting NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 anergized anergize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1501 # text = The inducible factors NK-kappa B, beta E2, CD28RC, and AP-1 are not expressed in resting cells and are twofold lower in anergized as compared with activated cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 NK NK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 beta beta NOUN NN Number=Sing _ _ _ _ 10 E2 E2 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 CD28RC CD28RC NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 resting rest VERB VBG VerbForm=Ger _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 twofold twofold VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 lower lower ADJ JJR Degree=Cmp _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 anergized anergize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 as as ADP IN _ _ _ _ _ 31 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1502 # text = In contrast, anergic T cells express approximately eightfold lower amounts of NF-AT, a member of the class of inducible factors that regulates IL-2 gene transcription. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 anergic anergic ADJ JJ Degree=Pos _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 approximately approximately ADV RB _ _ _ _ _ 9 eightfold eightfold VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 lower lower ADJ JJR Degree=Cmp _ _ _ _ 11 amounts amount NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 member member NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 class class NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 24 factors factor NOUN NNS Number=Plur _ _ _ _ 25 that that PRON WDT PronType=Rel _ _ _ _ 26 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 2 2 NUM CD NumType=Card _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1503 # text = (ABSTRACT TRUNCATED AT 250 WORDS) 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 ABSTRACT ABSTRACT X GW _ _ _ _ _ 3 TRUNCATED Truncate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 AT at ADV RB _ _ _ _ _ 5 250 250 NUM CD NumType=Card _ _ _ _ 6 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1504 # text = Document 003002549 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002549 003002549 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1505 # text = The p53 paradox in the pathogenesis of tumor progression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 p53 p53 NOUN NN Number=Sing _ _ _ _ 3 paradox paradox NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 tumor tumor NOUN NN Number=Sing _ _ _ _ 9 progression progression NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1506 # text = Recent evidence suggests that the p53 molecule appears in two different forms: the mutant p53 that stimulates tumor progression, and wild type p53 that inhibits tumor progression. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 evidence evidence NOUN NN Number=Sing _ _ _ _ 3 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 p53 p53 NOUN NN Number=Sing _ _ _ _ 7 molecule molecule NOUN NN Number=Sing _ _ _ _ 8 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 two two NUM CD NumType=Card _ _ _ _ 11 different different ADJ JJ Degree=Pos _ _ _ _ 12 forms form NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 : : PUNCT : _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 16 p53 p53 NOUN NN Number=Sing _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 tumor tumor NOUN NN Number=Sing _ _ _ _ 20 progression progression NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 wild wild ADJ JJ Degree=Pos _ _ _ _ 24 type type NOUN NN Number=Sing _ _ _ _ 25 p53 p53 NOUN NN Number=Sing _ _ _ _ 26 that that PRON WDT PronType=Rel _ _ _ _ 27 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 tumor tumor NOUN NN Number=Sing _ _ _ _ 29 progression progression NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1507 # text = In addition, it has been established that tumor necrosis factor-alpha (TNF-alpha) can activate the expression of wild type p53 in concert with the nuclear transcription factor, NF-kappa B. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 5 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 7 established establish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 9 tumor tumor NOUN NN Number=Sing _ _ _ _ 10 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 can can AUX MD VerbForm=Fin _ _ _ _ 20 activate activate VERB VB VerbForm=Inf _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 wild wild ADJ JJ Degree=Pos _ _ _ _ 25 type type NOUN NN Number=Sing _ _ _ _ 26 p53 p53 NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 concert concert NOUN NN Number=Sing _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 32 transcription transcription NOUN NN Number=Sing _ _ _ _ 33 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 kappa kappa NOUN NN Number=Sing _ _ _ _ 38 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 1508 # text = Both TNF-alpha and NF-kappa B are also involved in the stimulation of the pathway that leads to the expression of major histocompatibility complex (MHC) class I molecules and, hence, antigen presentation to the T cells. 1 Both both DET DT _ _ _ _ _ 2 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 alpha alpha NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 also also ADV RB _ _ _ _ _ 12 involved involved ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 pathway pathway NOUN NN Number=Sing _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 major major ADJ JJ Degree=Pos _ _ _ _ 26 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 27 complex complex NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 MHC MHC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 class class NOUN NN Number=Sing _ _ _ _ 32 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 33 molecules molecule NOUN NNS Number=Plur _ _ _ _ 34 and and CCONJ CC _ _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 hence hence ADV RB _ _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 39 presentation presentation NOUN NN Number=Sing _ _ _ _ 40 to to ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 T t PROPN NNP Number=Sing _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 1509 # text = In this paper we shall advance the hypothesis that: (i) TNF-alpha indirectly controls immune surveillance; and (ii) TNF-alpha controls DNA repair and tumor suppression through the regulation of wild type p53. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 paper paper NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 shall shall AUX MD VerbForm=Fin _ _ _ _ 6 advance advance VERB VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ SpaceAfter=No 10 : : PUNCT : _ _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 i i X LS _ _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 indirectly indirectly ADV RB _ _ _ _ _ 18 controls control VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 immune immune ADJ JJ Degree=Pos _ _ _ _ 20 surveillance surveillance NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ; ; PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 ii ii X LS _ _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 alpha alpha NOUN NN Number=Sing _ _ _ _ 29 controls controls NOUN NN Number=Sing _ _ _ _ 30 DNA dna NOUN NN Number=Sing _ _ _ _ 31 repair repair NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 tumor tumor NOUN NN Number=Sing _ _ _ _ 34 suppression suppression NOUN NN Number=Sing _ _ _ _ 35 through through ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 regulation regulation NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 wild wild ADJ JJ Degree=Pos _ _ _ _ 40 type type NOUN NN Number=Sing _ _ _ _ 41 p53 p53 NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 1510 # text = Thus, it is hypothesized that elevated TNF-alpha is primarily responsible for promoting tumor progression. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 hypothesized hypothesize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 primarily primarily ADV RB _ _ _ _ _ 13 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 14 for for SCONJ IN _ _ _ _ _ 15 promoting promote VERB VBG VerbForm=Ger _ _ _ _ 16 tumor tumor NOUN NN Number=Sing _ _ _ _ 17 progression progression NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1511 # text = Document 003002554 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002554 003002554 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1512 # text = Human T lymphotropic virus-I infection of human T lymphocytes induces expression of the beta-galactoside-binding lectin, galectin-3. 1 Human human PROPN NNP Number=Sing _ _ _ _ 2 T t PROPN NNP Number=Sing _ _ _ _ 3 lymphotropic lymphotropic ADJ JJ Degree=Pos _ _ _ _ 4 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 infection infection NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 T T PROPN NNP Number=Sing _ _ _ _ 11 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 galactoside-binding galactoside-binding NOUN NN Number=Sing _ _ _ _ 19 lectin lectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 galectin galectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1513 # text = Animal lectins play important roles in a variety of biological processes via their recognition of glycoconjugates. 1 Animal animal ADJ JJ Degree=Pos _ _ _ _ 2 lectins lectin NOUN NNS Number=Plur _ _ _ _ 3 play play VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 important important ADJ JJ Degree=Pos _ _ _ _ 5 roles role NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 variety variety NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 biological biological ADJ JJ Degree=Pos _ _ _ _ 11 processes process NOUN NNS Number=Plur _ _ _ _ 12 via via ADP IN _ _ _ _ _ 13 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 recognition recognition NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 glycoconjugates glycoconjugate NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1514 # text = Galectin-3 is a beta-galactoside-binding lectin previously designated as epsilon BP (IgE-binding protein), CBP35, Mac-2, L-29, and L-34, and its expression has been associated with various physiological and pathological processes, including cell growth, tumor transformation, and metastasis. 1 Galectin Galectin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 3 3 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 galactoside galactoside NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 binding binding VERB VBG VerbForm=Ger _ _ _ _ 11 lectin lectin NOUN NN Number=Sing _ _ _ _ 12 previously previously ADV RB _ _ _ _ _ 13 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 as as ADV RB _ _ _ _ _ 15 epsilon epsilon ADP IN _ _ _ _ _ 16 BP BP PROPN NNP Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 IgE Ige PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 binding binding VERB VBG VerbForm=Ger _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 CBP35 CBP35 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 Mac Mac PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 -2 -2 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 L L SYM $ _ _ _ _ SpaceAfter=No 30 - - SYM SYM _ _ _ _ SpaceAfter=No 31 29 29 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 L l PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 -34 -34 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 39 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 40 expression expression NOUN NN Number=Sing _ _ _ _ 41 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 42 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 43 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 44 with with ADP IN _ _ _ _ _ 45 various various ADJ JJ Degree=Pos _ _ _ _ 46 physiological physiological ADJ JJ Degree=Pos _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 pathological pathological ADJ JJ Degree=Pos _ _ _ _ 49 processes process NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 , , PUNCT , _ _ _ _ _ 51 including include VERB VBG VerbForm=Ger _ _ _ _ 52 cell cell NOUN NN Number=Sing _ _ _ _ 53 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 , , PUNCT , _ _ _ _ _ 55 tumor tumor NOUN NN Number=Sing _ _ _ _ 56 transformation transformation NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 , , PUNCT , _ _ _ _ _ 58 and and CCONJ CC _ _ _ _ _ 59 metastasis metastasis NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 1515 # text = Galectin-3 is widely distributed in various tissues and cell types and is expressed in many leukocytes, with the notable exception of B and T lymphocytes. 1 Galectin Galectin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 3 3 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 widely widely ADV RB _ _ _ _ _ 6 distributed distribute VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 various various ADJ JJ Degree=Pos _ _ _ _ 9 tissues tissue NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 types type NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 many many ADJ JJ Degree=Pos _ _ _ _ 18 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 notable notable ADJ JJ Degree=Pos _ _ _ _ 23 exception exception NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 B b PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 T t PROPN NNP Number=Sing _ _ _ _ 28 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1516 # text = We now report that galectin-3 is abundantly expressed in a number of human T lymphotropic virus (HTLV)-I-infected human T cell lines, including F6T, HUT 102, K3T, MT-2, and SLB-I, but is not expressed in non-HTLV-I-infected T cell lines such as Jurkat, CEM, and MOLT-4. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 now now ADV RB _ _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 galectin galectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 3 3 NUM CD NumType=Card _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 abundantly abundantly ADV RB _ _ _ _ _ 10 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 number number NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 lymphotropic lymphotropic ADJ JJ Degree=Pos _ _ _ _ 18 virus virus NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 T t NOUN NN Number=Sing _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 including include VERB VBG VerbForm=Ger _ _ _ _ 32 F6T F6T PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 HUT Hut PROPN NNP Number=Sing _ _ _ _ 35 102 102 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 K3T K3T PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 MT Mt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 SLB SLB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT , _ _ _ _ SpaceAfter=No 46 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 but but CCONJ CC _ _ _ _ _ 49 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 50 not not PART RB _ _ _ _ _ 51 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 52 in in ADP IN _ _ _ _ _ 53 non-HTLV non-HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT , _ _ _ _ SpaceAfter=No 55 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 56 -infected -infect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 57 T t PROPN NNP Number=Sing _ _ _ _ 58 cell cell NOUN NN Number=Sing _ _ _ _ 59 lines line NOUN NNS Number=Plur _ _ _ _ 60 such such ADJ JJ Degree=Pos _ _ _ _ 61 as as ADP IN _ _ _ _ _ 62 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 63 , , PUNCT , _ _ _ _ _ 64 CEM CEM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 65 , , PUNCT , _ _ _ _ _ 66 and and CCONJ CC _ _ _ _ _ 67 MOLT Molt NOUN NN Number=Sing _ _ _ SpaceAfter=No 68 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 69 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 70 . . PUNCT . _ _ _ _ _ # sent_id = 1517 # text = In addition, the galectin-3 level was markedly increased in human thymocytes after infection with HTLV-I as compared with uninfected thymocytes. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 galectin galectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 3 3 NUM CD NumType=Card _ _ _ _ 8 level level NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 markedly markedly ADV RB _ _ _ _ _ 11 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 15 after after ADP IN _ _ _ _ _ 16 infection infection NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 21 as as AUX VBP Mood=Ind|Tense=Pres|Typo=Yes|VerbForm=Fin _ _ _ _ 22 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 uninfected uninfect ADJ JJ Degree=Pos _ _ _ _ 25 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1518 # text = The up-regulation of galectin-3 expression appeared to correlate well with HTLV-I gene expression, as undetectable or very low levels of galectin-3 were found in the S1T and ATL-1K cell lines, which are nonproductively infected with HTLV-I. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 galectin galectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 3 3 NUM CD NumType=Card _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 correlate correlate VERB VB VerbForm=Inf _ _ _ _ 13 well well ADV RB Degree=Pos _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 as as SCONJ IN _ _ _ _ _ 22 undetectable undetectable ADJ JJ Degree=Pos _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 very very ADV RB _ _ _ _ _ 25 low low ADJ JJ Degree=Pos _ _ _ _ 26 levels level NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 galectin galectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 -3 -3 NUM CD NumType=Card _ _ _ _ 30 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 S1T S1T NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 ATL ATL ADV RB _ _ _ _ SpaceAfter=No 37 - - SYM SYM _ _ _ _ SpaceAfter=No 38 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 K k NUM CD NumType=Card _ _ _ _ 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 which which PRON WDT PronType=Rel _ _ _ _ 44 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 45 nonproductively nonproductively ADV RB _ _ _ _ _ 46 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 with with ADP IN _ _ _ _ _ 48 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT , _ _ _ _ SpaceAfter=No 50 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 1519 # text = In co-transfection experiments, the galectin-3 promoter was significantly up-regulated by expression vectors encoding the 40-kd Tax protein, a potent transactivator in HTLV-I. 1 In in ADP IN _ _ _ _ _ 2 co-transfection co-transfection NOUN NN Number=Sing _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 galectin galectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 3 3 NUM CD NumType=Card _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 significantly significantly ADV RB _ _ _ _ _ 12 up up ADV RB _ _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 vectors vector NOUN NNS Number=Plur _ _ _ _ 18 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kd kd NOUN NN Number=Sing _ _ _ _ 23 Tax tax NOUN NN Number=Sing _ _ _ _ 24 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 potent potent NOUN NN Number=Sing _ _ _ _ 28 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1520 # text = Analysis of various Tax mutants suggested that galectin-3 promoter induction is dependent on activation of the cyclic-AMP-responsive element binding protein/activation transcription factor family of transcription factors and, to a lesser extent, nuclear factor-kappa B/Rel induction. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 various various ADJ JJ Degree=Pos _ _ _ _ 4 Tax tax PROPN NNP Number=Sing _ _ _ _ 5 mutants mutant NOUN NNS Number=Plur _ _ _ _ 6 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 galectin galectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 3 3 NUM CD NumType=Card _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 cyclic cyclic NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 AMP Amp NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 24 element element NOUN NN Number=Sing _ _ _ _ 25 binding bind VERB VBG VerbForm=Ger _ _ _ _ 26 protein/ proteinith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 27 activation activation NOUN NN Number=Sing _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 factor factor NOUN NN Number=Sing _ _ _ _ 30 family family NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 transcription transcription NOUN NN Number=Sing _ _ _ _ 33 factors factor NOUN NNS Number=Plur _ _ _ _ 34 and and CCONJ CC _ _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 lesser lesser ADJ JJR Degree=Cmp _ _ _ _ 39 extent extent NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 42 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 kappa kappa NOUN NN Number=Sing _ _ _ _ 45 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 / / PUNCT , _ _ _ _ SpaceAfter=No 47 Rel Rel NOUN NN Number=Sing _ _ _ _ 48 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 1521 # text = Transfection of human promonocytic U-937 cells with an HTLV-I Tax expression vector induced galectin-3 expression in this cell line. 1 Transfection Transfection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 5 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 937 937 NUM CD NumType=Card _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 HTLV HTLV NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 14 Tax tax PROPN NNP Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 vector vector NOUN NN Number=Sing _ _ _ _ 17 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 galectin galectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 3 3 NUM CD NumType=Card _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1522 # text = Functionally, galectin-3 was shown to activate interleukin-2 production in Jurkat T cells. 1 Functionally functionally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 galectin galectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 3 3 NUM CD NumType=Card _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 activate activate VERB VB VerbForm=Inf _ _ _ _ 10 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 production production NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 16 T T PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1523 # text = Together, these findings raise the possibility that HTLV-I Tax production induces the transcription and subsequent synthesis and secretion of galectin-3, which in turn may further activate these T cells and contribute to the altered properties of cell growth found in adult T cell leukemia induced by HTLV-I. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 findings finding NOUN NNS Number=Plur _ _ _ _ 5 raise raise VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 possibility possibility NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 HTLV HTLV VERB VBP Abbr=Yes|Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 12 Tax tax PROPN NNP Number=Sing _ _ _ _ 13 production production NOUN NN Number=Sing _ _ _ _ 14 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 19 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 secretion secretion NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 galectin galectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 -3 -3 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 which which PRON WDT PronType=Rel _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 turn turn NOUN NN Number=Sing _ _ _ _ 29 may may AUX MD VerbForm=Fin _ _ _ _ 30 further further ADV RB _ _ _ _ _ 31 activate activate VERB VB VerbForm=Inf _ _ _ _ 32 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 33 T t PROPN NNP Number=Sing _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 altered alter VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 properties property NOUN NNS Number=Plur _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 cell cell NOUN NN Number=Sing _ _ _ _ 43 growth growth NOUN NN Number=Sing _ _ _ _ 44 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 adult adult ADJ JJ Degree=Pos _ _ _ _ 47 T T PROPN NNP Number=Sing _ _ _ _ 48 cell cell NOUN NN Number=Sing _ _ _ _ 49 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 50 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 51 by by ADP IN _ _ _ _ _ 52 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT , _ _ _ _ SpaceAfter=No 54 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1524 # text = Document 003002562 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002 003002 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 562 562 NUM CD NumType=Card _ _ _ _ 4 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1525 # text = Initiation binding repressor, a factor that binds to the transcription initiation site of the histone h5 gene, is a glycosylated member of a family of cell growth regulators [corrected] [published erratum appears in Mol Cell Biol 1996 Feb;16(2):735] 1 Initiation Initiation NOUN NN Number=Sing _ _ _ _ 2 binding bind VERB VBG VerbForm=Ger _ _ _ _ 3 repressor repressor NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 initiation initiation NOUN NN Number=Sing _ _ _ _ 13 site site NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 histone histone NOUN NN Number=Sing _ _ _ _ 17 h5 h5 NUM CD NumType=Card _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 glycosylated glycosylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 member member NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 family family NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 growth growth NOUN NN Number=Sing _ _ _ _ 30 regulators regulator NOUN NNS Number=Plur _ _ _ _ 31 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 corrected correct VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 33 ] ] PUNCT -RRB- _ _ _ _ _ 34 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 published publish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 erratum erratum NOUN NN Number=Sing _ _ _ _ 37 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 Mol Mol PROPN NNP Number=Sing _ _ _ _ 40 Cell cell PROPN NNP Number=Sing _ _ _ _ 41 Biol Biol PROPN NNP Number=Sing _ _ _ _ 42 1996 1996 NUM CD NumType=Card _ _ _ _ 43 Feb;16 Feb;16 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 45 2) 2) SYM NFP _ _ _ _ SpaceAfter=No 46 :735 :735 NUM CD NumType=Card _ _ _ SpaceAfter=No 47 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 1526 # text = Initiation binding repressor [corrected] (IBR) is a chicken erythrocyte factor (apparent molecular mass, 70 to 73 kDa) that binds to the sequences spanning the transcription initiation site of the histone h5 gene, repressing its transcription. 1 Initiation Initiation NOUN NN Number=Sing _ _ _ _ 2 binding binding VERB VBG VerbForm=Ger _ _ _ _ 3 repressor repressor NOUN NN Number=Sing _ _ _ _ 4 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 corrected correct VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 6 ] ] PUNCT -RRB- _ _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 IBR IBR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 chicken chicken NOUN NN Number=Sing _ _ _ _ 13 erythrocyte erythrocyte NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 apparent apparent ADJ JJ Degree=Pos _ _ _ _ 17 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 18 mass mass NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 70 70 NUM CD NumType=Card _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 73 73 NUM CD NumType=Card _ _ _ _ 23 kDa kDa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 that that PRON WDT PronType=Rel _ _ _ _ 26 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 sequences sequence NOUN NNS Number=Plur _ _ _ _ 30 spanning spann VERB VBG VerbForm=Ger _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 transcription transcription NOUN NN Number=Sing _ _ _ _ 33 initiation initiation NOUN NN Number=Sing _ _ _ _ 34 site site NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 histone histone NOUN NN Number=Sing _ _ _ _ 38 h5 h5 NUM CD NumType=Card _ _ _ _ 39 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 repressing represse VERB VBG VerbForm=Ger _ _ _ _ 42 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 43 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 1527 # text = A variety of other cells, including transformed erythroid precursors, do not have IBR but a factor referred to as IBF (68 to 70 kDa) that recognizes the same IBR sites. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 variety variety NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 other other ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 including include VERB VBG VerbForm=Ger _ _ _ _ 8 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 erythroid erythroid NOUN NN Number=Sing _ _ _ _ 10 precursors precursor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 have have VERB VB VerbForm=Inf _ _ _ _ 15 IBR IBR PROPN NNP Number=Sing _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 referred refer VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 as as ADP IN _ _ _ _ _ 22 IBF IBF PROPN NNP Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 68 68 NUM CD NumType=Card _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 70 70 NUM CD NumType=Card _ _ _ _ 27 kDa kDa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 that that PRON WDT PronType=Rel _ _ _ _ 30 recognizes recognize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 same same ADJ JJ Degree=Pos _ _ _ _ 33 IBR Ibr NOUN NN Number=Sing _ _ _ _ 34 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1528 # text = We have cloned the IBR cDNA and studied the relationship of IBR and IBF. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 IBR IBR PROPN NNP Number=Sing _ _ _ _ 6 cDNA cDNA PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 relationship relationship NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 IBR IBR PROPN NNP Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 IBF IBF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 1529 # text = IBR is a 503-amino-acid-long acidic protein which is 99.0% identical to the recently reported human NRF-1/alpha-Pal factor and highly related to the invertebrate transcription factors P3A2 and erected wing gene product (EWG). 1 IBR Ibr PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 503 503 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 amino amino NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 acid acid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 long long ADJ JJ Degree=Pos _ _ _ _ 11 acidic acidic ADJ JJ Degree=Pos _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 99.0 99.0 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 % % SYM NN Number=Sing _ _ _ _ 17 identical identical ADJ JJ Degree=Pos _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 recently recently ADV RB _ _ _ _ _ 21 reported report VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 NRF NRF NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 27 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 Pal pal ADJ JJ Degree=Pos _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 highly highly ADV RB _ _ _ _ _ 33 related related ADJ JJ Degree=Pos _ _ _ _ 34 to to ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 invertebrate invertebrate ADJ JJ Degree=Pos _ _ _ _ 37 transcription transcription NOUN NN Number=Sing _ _ _ _ 38 factors factor NOUN NNS Number=Plur _ _ _ _ 39 P3 P3 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 A2 A2 NOUN NN Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 erected erect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 wing w NOUN NN Number=Sing _ _ _ _ 44 gene gene NOUN NN Number=Sing _ _ _ _ 45 product product NOUN NN Number=Sing _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 EWG EWG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 1530 # text = We present evidence that IBR and IBF are most likely identical proteins, differing in their degree of glycosylation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 evidence evidence NOUN NN Number=Sing _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 IBR IBR PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 IBF IBF PROPN NNP Number=Sing _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 most most ADV RBS _ _ _ _ _ 10 likely likely ADJ JJ Degree=Pos _ _ _ _ 11 identical identical ADJ JJ Degree=Pos _ _ _ _ 12 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 differing differ VERB VBG VerbForm=Ger _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 17 degree degree NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 glycosylation glycosylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1531 # text = We have analyzed several molecular aspects of IBR/F and shown that the factor associates as stable homodimers and that the dimer is the relevant DNA-binding species. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 several several ADJ JJ Degree=Pos _ _ _ _ 5 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 6 aspects aspect NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 IBR/ IBR/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 9 F F PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 associates associate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 stable stable ADJ JJ Degree=Pos _ _ _ _ 18 homodimers homodimer NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 dimer dimer NOUN NN Number=Sing _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 26 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 binding binding VERB VBG VerbForm=Ger _ _ _ _ 29 species species NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1532 # text = The evolutionarily conserved N-terminal half of IBR/F harbors the DNA-binding/dimerization domain (outer limits, 127 to 283), one or several casein kinase II sites (37 to 67), and a bipartite nuclear localization signal (89 to 106) which appears to be necessary for nuclear targeting. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 evolutionarily evolutionarily ADV RB Degree=Pos _ _ _ _ 3 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 N- N- SYM SYM _ _ _ _ SpaceAfter=No 5 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 6 half half NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 IBR/ Ibr/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 9 F F PROPN NNP Number=Sing _ _ _ _ 10 harbors harbor VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 15 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 16 dimerization dimerization NOUN NN Number=Sing _ _ _ _ 17 domain domain NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 outer outer ADJ JJ Degree=Pos _ _ _ _ 20 limits limit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 127 127 NUM CD NumType=Card _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 283 283 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 one one NUM CD NumType=Card _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 several several ADJ JJ Degree=Pos _ _ _ _ 30 casein casein NOUN NN Number=Sing _ _ _ _ 31 kinase kinase NOUN NN Number=Sing _ _ _ _ 32 II ii NUM CD NumType=Card _ _ _ _ 33 sites site NOUN NNS Number=Plur _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 37 37 NUM CD NumType=Card _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 67 67 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 bipartite bipartite ADJ JJ Degree=Pos _ _ _ _ 43 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 44 localization localization NOUN NN Number=Sing _ _ _ _ 45 signal signal NOUN NN Number=Sing _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 89 89 NUM CD NumType=Card _ _ _ _ 48 to to ADP IN _ _ _ _ _ 49 106 106 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ _ 51 which which PRON WDT PronType=Rel _ _ _ _ 52 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 53 to to PART TO _ _ _ _ _ 54 be be AUX VB VerbForm=Inf _ _ _ _ 55 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 56 for for ADP IN _ _ _ _ _ 57 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 58 targeting targeting NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 1533 # text = Binding site selection revealed that the alternating RCGCRYGCGY consensus constitutes high-affinity IBR/F binding sites and that the direct-repeat palindrome TGCGCATGCGCA is the optimal site. 1 Binding bind VERB VBG VerbForm=Ger _ _ _ _ 2 site site NOUN NN Number=Sing _ _ _ _ 3 selection selection NOUN NN Number=Sing _ _ _ _ 4 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 alternating alternate VERB VBG VerbForm=Ger _ _ _ _ 8 RCGCRYGCGY Rcgcrygcgy NOUN NN Number=Sing _ _ _ _ 9 consensus consensus NOUN NN Number=Sing _ _ _ _ 10 constitutes constitute VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 affinity affinity NOUN NN Number=Sing _ _ _ _ 14 IBR/ IBR/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 F f SCONJ IN _ _ _ _ _ 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 sites site NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 direct direct ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 repeat repeat ADJ JJ Degree=Pos _ _ _ _ 24 palindrome palindrome NOUN NN Number=Sing _ _ _ _ 25 TGCGCATGCGCA TGCGCATGCGCa NOUN NN Number=Sing _ _ _ _ 26 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 29 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1534 # text = A survey of genes potentially regulated by this family of factors primarily revealed genes involved in growth-related metabolism. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 survey survey NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 genes gene NOUN NNS Number=Plur _ _ _ _ 5 potentially potentially ADV RB _ _ _ _ _ 6 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 9 family family NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ _ 12 primarily primarily ADV RB _ _ _ _ _ 13 revealed reveale VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 genes gene NOUN NNS Number=Plur _ _ _ _ 15 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 related related ADJ JJ Degree=Pos _ _ _ _ 20 metabolism metabolism NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1535 # text = Document 003002564 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002 003002 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 564 564 NUM CD NumType=Card _ _ _ _ 4 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1536 # text = Apoptosis signaling pathways in normal T cells: differential activity of Bcl-2 and IL-1beta-converting enzyme family protease inhibitors on glucocorticoid- and Fas-mediated cytotoxicity. 1 Apoptosis Apoptosis PROPN NNP Number=Sing _ _ _ _ 2 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 3 pathways pathway NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 normal normal ADJ JJ Degree=Pos _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 : : PUNCT : _ _ _ _ _ 9 differential differential ADJ JJ Degree=Pos _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 converting convert VERB VBG VerbForm=Ger _ _ _ _ 22 enzyme enzyme ADJ JJ Degree=Pos _ _ _ _ 23 family family NOUN NN Number=Sing _ _ _ _ 24 protease protease NOUN NN Number=Sing _ _ _ _ 25 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 Fas- Fas- SYM NFP _ _ _ _ SpaceAfter=No 31 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 cytotoxicity cytotoxicity NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1537 # text = Fas-mediated apoptosis plays an important role in regulating the immune response in peripheral T cells. 1 Fas- Fas- SYM NFP _ _ _ _ SpaceAfter=No 2 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 4 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 important important ADJ JJ Degree=Pos _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 in in SCONJ IN _ _ _ _ _ 9 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 immune immune ADJ JJ Degree=Pos _ _ _ _ 12 response response NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1538 # text = Restimulation of T cell blasts up-regulates Fas and Fas ligand expression, with subsequent interaction leading to cell death. 1 Restimulation Restimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cell cell PROPN NNP Number=Sing _ _ _ _ 5 blasts blast VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 up up ADP RP _ _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 regulates regulate NOUN NNS Number=Plur _ _ _ _ 9 Fas Fa NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 Fas Fa NOUN NNS Number=Plur _ _ _ _ 12 ligand ligand VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 17 interaction interaction NOUN NN Number=Sing _ _ _ _ 18 leading lead VERB VBG VerbForm=Ger _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 cell cell VERB VB VerbForm=Inf _ _ _ _ 21 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1539 # text = Overexpression of Bcl-2 in tumor cells blocks apoptosis induced by many stimuli, but inhibition of Fas-mediated killing has not been consistently observed. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 tumor tumor ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 blocks block NOUN NNS Number=Plur _ _ _ _ 10 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 many many ADJ JJ Degree=Pos _ _ _ _ 14 stimuli stimuli NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 Fas- Fas- SYM NFP _ _ _ _ SpaceAfter=No 20 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 killing killing NOUN NN Number=Sing _ _ _ _ 22 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 not not PART RB _ _ _ _ _ 24 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 25 consistently consistently ADV RB _ _ _ _ _ 26 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1540 # text = To examine the behavior of Bcl-2 in normal cells, T cell blasts were transiently transfected with Bcl-2 and related gene products to determine the effect on apoptotic signaling. 1 To to PART TO _ _ _ _ _ 2 examine examine VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 behavior behavior NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 normal normal ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 blasts blast NOUN NNS Number=Plur _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 transiently transiently ADV RB _ _ _ _ _ 18 transfected transfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 related relate ADJ JJ Degree=Pos _ _ _ _ 25 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 products product NOUN NNS Number=Plur _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 determine determine VERB VB VerbForm=Inf _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 effect effect NOUN NN Number=Sing _ _ _ _ 31 on on ADP IN _ _ _ _ _ 32 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 33 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1541 # text = Transient overexpression of Bcl-2 in mouse and human T cell blasts did not block Fas-mediated apoptosis, whereas etoposide- and glucocorticoid-induced cytotoxicity was potently inhibited. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 mouse mouse NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 T T PROPN NNP Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 blasts blast NOUN NNS Number=Plur _ _ _ _ 14 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 block block VERB VB VerbForm=Inf _ _ _ _ 17 Fas- Fas- PUNCT : _ _ _ _ SpaceAfter=No 18 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 whereas wherea ADV RB _ _ _ _ _ 22 etoposide etoposide ADV RB _ _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 -induced -induced ADJ JJ Degree=Pos _ _ _ _ 27 cytotoxicity cytotoxicity NOUN NN Number=Sing _ _ _ _ 28 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 29 potently potently ADV RB _ _ _ _ _ 30 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1542 # text = Expression of Bcl-xL and adenovirus E1B 19K did not interfere with anti-Fas killing. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 xL xL PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 adenovirus adenovirus PROPN NNP Number=Sing _ _ _ _ 8 E1B E1B PROPN NNP Number=Sing _ _ _ _ 9 19 19 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 K k NUM CD NumType=Card _ _ _ _ 11 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 interfere interfere VERB VB VerbForm=Inf _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 anti anti NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 -Fas -Fas SCONJ IN _ _ _ _ _ 17 killing kill VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1543 # text = In contrast, interleukin-1beta-converting enzyme family protease inhibitors Ac-DEVD-CHO and CrmA blocked Fas-mediated apoptosis. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 converting converte VERB VBG VerbForm=Ger _ _ _ _ 10 enzyme enzyme ADJ JJ Degree=Pos _ _ _ _ 11 family family NOUN NN Number=Sing _ _ _ _ 12 protease protease NOUN NN Number=Sing _ _ _ _ 13 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 14 Ac- Ac- PUNCT , _ _ _ _ SpaceAfter=No 15 DEVD DEVD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 CHO Cho PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 CrmA CrmA PROPN NNP Number=Sing _ _ _ _ 20 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 Fas Fas PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1544 # text = These results suggest that peripheral T cells use distinct apoptosis signaling pathways with differential sensitivity to Bcl-2 and interleukin-1beta-converting enzyme family protease inhibitors. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 use use VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 10 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 11 signaling signale VERB VBG VerbForm=Ger _ _ _ _ 12 pathways pathway NOUN NNS Number=Plur _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 differential differential ADJ JJ Degree=Pos _ _ _ _ 15 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 interleukin interleukin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - SYM SYM _ _ _ _ SpaceAfter=No 25 converting convert VERB VBG VerbForm=Ger _ _ _ _ 26 enzyme enzyme ADJ JJ Degree=Pos _ _ _ _ 27 family family NOUN NN Number=Sing _ _ _ _ 28 protease protease NOUN NN Number=Sing _ _ _ _ 29 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1545 # text = Since T cells normally express Bcl-2 and Bcl-xL following activation, their inability to block Fas-mediated apoptosis may allow for the elimination of self-reactive cells and the appropriate regulation of immune responses. 1 Since since SCONJ IN _ _ _ _ _ 2 T t PROPN NNP Number=Sing _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 normally normally ADV RB _ _ _ _ _ 5 express express ADJ JJ Degree=Pos _ _ _ _ 6 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 xL xL PROPN NNP Number=Sing _ _ _ _ 13 following follow VERB VBG VerbForm=Ger _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 17 inability inability NOUN NN Number=Sing _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 block block VERB VB VerbForm=Inf _ _ _ _ 20 Fas- Fas- PUNCT : _ _ _ _ SpaceAfter=No 21 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 apoptosis apoptosis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 23 may may AUX MD VerbForm=Fin _ _ _ _ 24 allow allow VERB VB VerbForm=Inf _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 elimination elimination NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 self self NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 appropriate appropriate ADJ JJ Degree=Pos _ _ _ _ 36 regulation regulation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 immune immune ADJ JJ Degree=Pos _ _ _ _ 39 responses respons NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1546 # text = Document 003002565 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002565 003002565 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1547 # text = Induction of monocytic differentiation and NF-kappa B-like activities by human immunodeficiency virus 1 infection of myelomonoblastic cells. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 4 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 like like ADJ JJ Degree=Pos _ _ _ _ 12 activities activity NOUN NNS Number=Plur _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ _ 17 1 1 NUM CD NumType=Card _ _ _ _ 18 infection infection NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 myelomonoblastic myelomonoblastic ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1548 # text = The effects of human immunodeficiency virus 1 (HIV-1) infection on cellular differentiation and NF-kappa B DNA binding activity have been investigated in a new model of myeloid differentiation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 1 1 NUM CD NumType=Card _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 infection infection NOUN NN Number=Sing _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 16 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ _ 22 DNA dna NOUN NN Number=Sing _ _ _ _ 23 binding binding VERB VBG VerbForm=Ger _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ _ 25 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 27 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 new new ADJ JJ Degree=Pos _ _ _ _ 31 model model NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 34 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1549 # text = PLB-985 cells represent a bipotential myelomonoblastic cell population capable of either granulocytic or monocytic differentiation after induction with appropriate inducers. 1 PLB Plb NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 985 985 NUM CD NumType=Card _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 represent represent VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 bipotential bipotential ADJ JJ Degree=Pos _ _ _ _ 8 myelomonoblastic myelomonoblastic ADJ JJ Degree=Pos _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 population population NOUN NN Number=Sing _ _ _ _ 11 capable capable ADJ JJ Degree=Pos _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 either either CCONJ CC _ _ _ _ _ 14 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 15 or or CCONJ CC _ _ _ _ _ 16 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 17 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 18 after after ADP IN _ _ _ _ _ 19 induction induction NOUN NN Number=Sing _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 appropriate appropriate ADJ JJ Degree=Pos _ _ _ _ 22 inducers inducer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1550 # text = By virtue of the presence of CD4 on the cell surface, PLB-985 cells were chronically infected with HIV-1 strain IIIB. 1 By by ADP IN _ _ _ _ _ 2 virtue virtue NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 presence presence NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 CD4 CD4 NUM CD NumType=Card _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 surface surface NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 PLB Plb NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 985 985 NUM CD NumType=Card _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 chronically chronically ADV RB _ _ _ _ _ 19 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 strain strain NOUN NN Number=Sing _ _ _ _ 25 IIIB Iiib PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1551 # text = PLB-IIIB cells clearly possessed a more monocytic phenotype than the parental myeloblasts, as determined by differential staining, increased expression of the myeloid-specific surface markers, and transcription of the c-fms proto-oncogene. 1 PLB Plb NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 IIIB Iiib NOUN NN Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 clearly clearly ADV RB _ _ _ _ _ 6 possessed possess VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 more more ADV RBR _ _ _ _ _ 9 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 10 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 11 than than ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 parental parental ADJ JJ Degree=Pos _ _ _ _ 14 myeloblasts myeloblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 as as SCONJ IN _ _ _ _ _ 17 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 differential differential ADJ JJ Degree=Pos _ _ _ _ 20 staining staining NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 myeloid myeloid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 specific specific ADJ JJ Degree=Pos _ _ _ _ 29 surface surface NOUN NN Number=Sing _ _ _ _ 30 markers marker NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 c- c- SYM NFP _ _ _ _ SpaceAfter=No 37 fms fm NOUN NNS Number=Plur _ _ _ _ 38 proto proto PART TO _ _ _ _ SpaceAfter=No 39 -oncogene -oncogene VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1552 # text = NF-kappa B binding activity was inducible by tumor necrosis factor and phorbol myristate acetate in PLB-985. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 binding binde VERB VBG VerbForm=Ger _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 tumor tumor NOUN NN Number=Sing _ _ _ _ 11 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 15 myristate myristate NOUN NN Number=Sing _ _ _ _ 16 acetate acetate NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 PLB PLB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - SYM SYM _ _ _ _ SpaceAfter=No 20 985 985 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1553 # text = However, in PLB-IIIB cells, constitutive expression of a novel NF-kappa B complex was detected, composed of proteins ranging between 70 and 110 kD. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 PLB PLB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 IIIB IIIB PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 novel novel NOUN NN Number=Sing _ _ _ _ 14 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 complex complex NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 composed compose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 proteins protein NOUN NNS Number=Plur _ _ _ _ 25 ranging range VERB VBG VerbForm=Ger _ _ _ _ 26 between between ADP IN _ _ _ _ _ 27 70 70 NUM CD NumType=Card _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 110 110 NUM CD NumType=Card _ _ _ _ 30 kD kD NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1554 # text = These proteins interacted specifically with the symmetric NF-kappa B site from the interferon beta (IFN-beta) promoter. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 proteins protein NOUN NNS Number=Plur _ _ _ _ 3 interacted interact VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 specifically specifically ADV RB _ _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 symmetric symmetric ADJ JJ Degree=Pos _ _ _ _ 8 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 interferon interferon NOUN NN Number=Sing _ _ _ _ 16 beta beta NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1555 # text = Mutations affecting the 5' guanine residues of the kappa B site were unable to compete for these NF-kappa B-related proteins. 1 Mutations Mutation NOUN NNS Number=Plur _ _ _ _ 2 affecting affecte VERB VBG VerbForm=Ger _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 ' ' PUNCT `` _ _ _ _ _ 6 guanine guanine NOUN NN Number=Sing _ _ _ _ 7 residues residue NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B b PROPN NNP Number=Sing _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 unable unable ADJ JJ Degree=Pos _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 compete compete VERB VB VerbForm=Inf _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 19 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa NOUN NN Number=Sing _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 related related ADJ JJ Degree=Pos _ _ _ _ 25 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1556 # text = Inducibility of endogenous IFN-beta and IFN-alpha RNA was also increased in PLB-IIIB cells. 1 Inducibility Inducibility NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 4 IFN IFN NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 beta beta NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 IFN IFN NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 RNA RNA PROPN NNP Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 also also ADV RB _ _ _ _ _ 14 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 PLB PLB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 IIIB Iiib PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1557 # text = These studies indicate that HIV-1 infection of myelomonoblastic cells may select for a more mature monocytic phenotype and that unique subunit associations of NF-kappa B DNA binding proteins may contribute to differential NF-kappa B-mediated gene expression. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 infection infection NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 myelomonoblastic myelomonoblastic ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 may may AUX MD VerbForm=Fin _ _ _ _ 13 select select VERB VB VerbForm=Inf _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 more more ADV RBR _ _ _ _ _ 17 mature mature ADJ JJ Degree=Pos _ _ _ _ 18 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 19 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 22 unique unique ADJ JJ Degree=Pos _ _ _ _ 23 subunit subunit NOUN NN Number=Sing _ _ _ _ 24 associations association NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 DNA dna NOUN NN Number=Sing _ _ _ _ 31 binding bind VERB VBG VerbForm=Ger _ _ _ _ 32 proteins protein NOUN NNS Number=Plur _ _ _ _ 33 may may AUX MD VerbForm=Fin _ _ _ _ 34 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 differential differential VERB VB VerbForm=Inf _ _ _ _ 37 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 kappa kappa NOUN NN Number=Sing _ _ _ _ 40 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 gene gene NOUN NN Number=Sing _ _ _ _ 44 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1558 # text = Document 003002567 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002567 003002567 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1559 # text = NF-kappa B activity in T cells stably expressing the Tax protein of human T cell lymphotropic virus type I. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 stably stably ADV RB _ _ _ _ _ 10 expressing express VERB VBG VerbForm=Ger _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 Tax tax NOUN NN Number=Sing _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 T T PROPN NNP Number=Sing _ _ _ _ 17 cell cell PROPN NNP Number=Sing _ _ _ _ 18 lymphotropic lymphotropic ADJ JJ Degree=Pos _ _ _ _ 19 virus virus NOUN NN Number=Sing _ _ _ _ 20 type type NOUN NN Number=Sing _ _ _ _ 21 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1560 # text = The effect of constitutive Tax expression on the interaction of NF-kappa B with its recognition sequence and on NF-kappa B-dependent gene expression was examined in T lymphoid Jurkat cell lines (19D and 9J) stably transformed with a Tax expression vector. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 5 Tax tax NOUN NN Number=Sing _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 interaction interaction NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 17 recognition recognition NOUN NN Number=Sing _ _ _ _ 18 sequence sequence NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 on on ADP IN _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa PROPN NNP Number=Sing _ _ _ _ 24 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 T t PROPN NNP Number=Sing _ _ _ _ 33 lymphoid lymphoid VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ _ 36 lines line NOUN NNS Number=Plur _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 19D 19D NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 9J 9J NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 stably stably ADV RB _ _ _ _ _ 43 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 with with ADP IN _ _ _ _ _ 45 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 46 Tax tax NOUN NN Number=Sing _ _ _ _ 47 expression expression NOUN NN Number=Sing _ _ _ _ 48 vector vector NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 1561 # text = Tax expressing T cell lines contained a constitutive level of NF-kappa B binding activity, detectable by mobility shift assay and uv cross-linking using a palindromic NF-kappa B probe homologous to the interferon beta PRDII site. 1 Tax tax NOUN NN Number=Sing _ _ _ _ 2 expressing express VERB VBG VerbForm=Ger _ _ _ _ 3 T t NUM CD NumType=Card _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 lines line NOUN NNS Number=Plur _ _ _ _ 6 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 9 level level NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ 14 B b PROPN NNP Number=Sing _ _ _ _ 15 binding bind VERB VBG VerbForm=Ger _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 mobility mobility NOUN NN Number=Sing _ _ _ _ 21 shift shift NOUN NN Number=Sing _ _ _ _ 22 assay assay NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 uv uv NOUN NN Number=Sing _ _ _ _ 25 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 27 using use VERB VBG VerbForm=Ger _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 palindromic palindromic ADJ JJ Degree=Pos _ _ _ _ 30 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappa kappa PROPN NNP Number=Sing _ _ _ _ 33 B b PROPN NNP Number=Sing _ _ _ _ 34 probe probe ADV RB _ _ _ _ _ 35 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 interferon interferon PROPN NNP Number=Sing _ _ _ _ 39 beta beta PROPN NNP Number=Sing _ _ _ _ 40 PRDII Prdii PROPN NNP Number=Sing _ _ _ _ 41 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 1562 # text = In Jurkat and NC2.10 induction with phorbol esters resulted in the appearance of new DNA binding proteins of 85, 75, and 54 kDa, whereas in Tax expressing cells the 85-kDa protein and a 92-kDa DNA binding protein were constitutively induced. 1 In in ADP IN _ _ _ _ _ 2 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 NC2.10 NC2.10 NUM CD NumType=Card _ _ _ _ 5 induction induction NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 8 esters ester NOUN NNS Number=Plur _ _ _ _ 9 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 appearance appearance NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 new new ADJ JJ Degree=Pos _ _ _ _ 15 DNA dna NOUN NN Number=Sing _ _ _ _ 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 proteins protein NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 85 85 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 75 75 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 54 54 NUM CD NumType=Card _ _ _ _ 25 kDa kDa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 whereas wherea SCONJ IN _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 Tax Tax NOUN NN Number=Sing _ _ _ _ 30 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 85 85 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 kDa kDa NOUN NN Number=Sing _ _ _ _ 36 protein protein NOUN NN Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 92 92 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 kDa kDa NOUN NN Number=Sing _ _ _ _ 42 DNA dna NOUN NN Number=Sing _ _ _ _ 43 binding bind VERB VBG VerbForm=Ger _ _ _ _ 44 protein protein NOUN NN Number=Sing _ _ _ _ 45 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 46 constitutively constitutively ADV RB _ _ _ _ _ 47 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 1563 # text = Expression of Tax protein in 19D and 9J resulted in transcription of the endogenous NF-kappa B-dependent granulocyte-macrophage colony stimulating factor gene and increased basal level expression of transfected NF-kappa B-regulated promoters. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Tax tax NOUN NN Number=Sing _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 19D 19D PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 9J 9J PROPN NNP Number=Sing _ _ _ _ 9 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 15 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 21 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 24 colony colony NOUN NN Number=Sing _ _ _ _ 25 stimulating stimulate VERB VBG VerbForm=Ger _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 basal basal ADJ JJ Degree=Pos _ _ _ _ 31 level level NOUN NN Number=Sing _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 kappa kappa NOUN NN Number=Sing _ _ _ _ 38 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 1564 # text = Nonetheless transcription of both the endogenous and the transfected gene was inducible by PMA treatment. 1 Nonetheless nonetheless ADJ JJ Degree=Pos _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 both both CCONJ CC _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transfected transfect ADJ JJ Degree=Pos _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 PMA PMA PROPN NNP Number=Sing _ _ _ _ 15 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 1565 # text = Tax expression in Jurkat 1 Tax tax NOUN NN Number=Sing _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ # sent_id = 1566 # text = T cells may alter the stoichiometry of NF-kappa B DNA binding proteins and thus change the expression of NF-kappa B-regulated promoters. 1 T t ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 may may AUX MD VerbForm=Fin _ _ _ _ 4 alter alter VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 stoichiometry stoichiometry NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 proteins protein NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 thus thus ADV RB _ _ _ _ _ 17 change change VERB VB VerbForm=Inf _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa NOUN NN Number=Sing _ _ _ _ 24 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1567 # text = Document 003002568 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002568 003002568 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1568 # text = Identification and characterization of a leukocyte-specific component of the nuclear body. 1 Identification identification NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 characterization characterization NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 leukocyte leukocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 component component NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 body body NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1569 # text = The nuclear body (NB) is a cellular organelle that is involved in the pathogenesis of acute promyelocytic leukemia and viral infection. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 body body NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 NB NB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 10 organelle organelle NOUN NN Number=Sing _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 involved involved ADJ JJ Degree=Pos _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 acute acute ADJ JJ Degree=Pos _ _ _ _ 19 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ _ 20 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 viral viral ADJ JJ Degree=Pos _ _ _ _ 23 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1570 # text = The NB is also a target of antibodies in the serum of patients with the autoimmune disease primary biliary cirrhosis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 NB Nb NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 target target NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 serum serum NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 patients patient NOUN NNS Number=Plur _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 autoimmune autoimmune ADJ JJ Degree=Pos _ _ _ _ 17 disease disease NOUN NN Number=Sing _ _ _ _ 18 primary primary ADJ JJ Degree=Pos _ _ _ _ 19 biliary biliary ADJ JJ Degree=Pos _ _ _ _ 20 cirrhosis cirrhosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1571 # text = In this study, serum from a patient with primary biliary cirrhosis was used to identify a cDNA encoding a novel component of the NB, a 140-kDa protein designated Sp140. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 serum serum NOUN NN Number=Sing _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 patient patient NOUN NN Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 primary primary ADJ JJ Degree=Pos _ _ _ _ 11 biliary biliary ADJ JJ Degree=Pos _ _ _ _ 12 cirrhosis cirrhosis NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 identify identify VERB VB VerbForm=Inf _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 19 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 novel novel NOUN NN Number=Sing _ _ _ _ 22 component component NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 NB NB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 140 140 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kDa kDa NOUN NN Number=Sing _ _ _ _ 31 protein protein NOUN NN Number=Sing _ _ _ _ 32 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 Sp140 Sp140 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1572 # text = The predicted amino acid sequence of the amino-terminal portion of Sp140 was similar to Sp100, a previously identified NB protein. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 predicted predict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 amino amino DET DT _ _ _ _ _ 4 acid acid ADJ JJ Degree=Pos _ _ _ _ 5 sequence sequence NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 amino amino NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 11 portion portion NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Sp140 Sp140 PROPN NNP Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 similar similar ADJ JJ Degree=Pos _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 Sp100 Sp100 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 previously previously ADV RB _ _ _ _ _ 21 identified identify ADJ JJ Degree=Pos _ _ _ _ 22 NB NB PROPN NNP Number=Sing _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1573 # text = The carboxyl portion of Sp140 contained a zinc-finger domain and a bromodomain, motifs that are present in proteins regulating gene transcription. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 carboxyl carboxyl NOUN NN Number=Sing _ _ _ _ 3 portion portion NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Sp140 Sp140 PROPN NNP Number=Sing _ _ _ _ 6 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 zinc zinc NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 finger finger NOUN NN Number=Sing _ _ _ _ 11 domain domain NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 bromodomain bromodomain NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 motifs motif NOUN NNS Number=Plur _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 present present ADJ JJ Degree=Pos _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 proteins protein NOUN NNS Number=Plur _ _ _ _ 22 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 23 gene gene ADJ JJ Degree=Pos _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1574 # text = High levels of Sp140 mRNA were detected in human spleen and peripheral blood leukocytes, but not other human tissues. 1 High high ADJ JJ Degree=Pos _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Sp140 Sp140 PROPN NNP Number=Sing _ _ _ _ 5 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 spleen spleen NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 13 blood blood NOUN NN Number=Sing _ _ _ _ 14 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 not not ADV RB _ _ _ _ _ 18 other other ADJ JJ Degree=Pos _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1575 # text = The level of SP140 mRNA in myeloid precursor cell lines HL60 and NB4 markedly increased in response to chemically induced cellular differentiation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 level level NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 SP sp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 140 140 NUM CD NumType=Card _ _ _ _ 6 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 9 precursor precursor ADJ JJ Degree=Pos _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 lines line NOUN NNS Number=Plur _ _ _ _ 12 HL60 HL60 PROPN NNP Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 NB4 NB4 PROPN NNP Number=Sing _ _ _ _ 15 markedly markedly ADV RB _ _ _ _ _ 16 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 response response NOUN NN Number=Sing _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 chemically chemically ADV RB _ _ _ _ _ 21 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 23 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1576 # text = Immunohistochemical techniques were used to demonstrate that SP140 localized to the NB in differentiated HL60 and NB4 cells. 1 Immunohistochemical Immunohistochemical ADJ JJ Degree=Pos _ _ _ _ 2 techniques technique NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 demonstrate demonstrate VERB VB VerbForm=Inf _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 SP sp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 140 140 NUM CD NumType=Card _ _ _ _ 10 localized localize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 NB NB PROPN NNP Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 differentiated differentiated PROPN NNP Number=Sing _ _ _ _ 16 HL60 HL60 PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 NB4 NB4 PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1577 # text = The location of Sp140 in the NB, and expression of this gene in cells involved in host defense, suggest that Sp140 may be involved in the pathogenesis of acute promyelocytic leukemia and viral infection. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 location location NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Sp140 Sp140 NUM CD NumType=Card _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 NB NB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 involved involved VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 host host NOUN NN Number=Sing _ _ _ _ 19 defense defense NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 that that SCONJ IN _ _ _ _ _ 23 Sp140 Sp140 PROPN NNP Number=Sing _ _ _ _ 24 may may AUX MD VerbForm=Fin _ _ _ _ 25 be be AUX VB VerbForm=Inf _ _ _ _ 26 involved involved ADJ JJ Degree=Pos _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 acute acute ADJ JJ Degree=Pos _ _ _ _ 32 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ _ 33 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 viral viral ADJ JJ Degree=Pos _ _ _ _ 36 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1578 # text = Document 003002570 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002570 003002570 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1579 # text = Activation of pp90rsk and early growth response-1 gene expression by pokeweed mitogen in human B cells. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 pp90rsk pp90rsk NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 early early ADJ JJ Degree=Pos _ _ _ _ 6 growth growth NOUN NN Number=Sing _ _ _ _ 7 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 pokeweed pokeweed VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 mitogen mitogen NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 B b ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1580 # text = The present studies have examined the effects of pokeweed mitogen (PWM) on the induction of early growth response-1 gene (EGR-1) in normal human B cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 effects effect NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 pokeweed pokeweed VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 mitogen mitogen NOUN NNS Number=Plur _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 PWM PWM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 early early ADJ JJ Degree=Pos _ _ _ _ 19 growth growth NOUN NN Number=Sing _ _ _ _ 20 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 EGR EGR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 X LS _ _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 normal normal ADJ JJ Degree=Pos _ _ _ _ 31 human human ADJ JJ Degree=Pos _ _ _ _ 32 B b NOUN NN Number=Sing _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1581 # text = PWM regulates EGR-1 gene expression by both transcriptional and post-transcriptional mechanisms. 1 PWM PWM PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ _ 2 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 EGR EGR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 both both CCONJ CC _ _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 post-transcriptional post-transcriptional ADJ JJ Degree=Pos _ _ _ _ 13 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 1582 # text = Transient transfection assays with EGR-1 promoter fragments linked to the chloramphenicol acetyltransferase (CAT) gene demonstrated that PWM induced EGR-1 transcription is conferred by the CArG motif (C C[AT]6GG) in the EGR-1 promoter. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 transfection transfection NOUN NN Number=Sing _ _ _ _ 3 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 EGR EGR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 fragments fragment NOUN NNS Number=Plur _ _ _ _ 10 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 14 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 CAT cat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 gene gene PRON NN Number=Sing _ _ _ _ 19 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 PWM PWM PROPN NNP Number=Sing _ _ _ _ 22 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 EGR EGR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 conferred confer VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 CArG CArG PROPN NNP Number=Sing _ _ _ _ 32 motif motif NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 C C PROPN NNP Number=Sing _ _ _ _ 35 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 AT at PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 6GG 6gg INTJ UH _ _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 EGR Egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT , _ _ _ _ SpaceAfter=No 45 1 1 NUM CD NumType=Card _ _ _ _ 46 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 1583 # text = The results further demonstrated the activation of S6 kinase (pp90rsk), evidenced by phosphorylation of S6 and serum response factor (SRF) peptides, in PWM treated B cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 further further ADV RB _ _ _ _ _ 4 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 S6 S6 NUM CD NumType=Card _ _ _ _ 9 kinase kinase NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 pp90rsk pp90rsk NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 evidenced evidence VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 S6 s6 NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 serum serum NOUN NN Number=Sing _ _ _ _ 21 response response NOUN NN Number=Sing _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 SRF SRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 peptides peptide NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 PWM PWM PROPN NNP Number=Sing _ _ _ _ 30 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 B b ADJ JJ Degree=Pos _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1584 # text = Taken together, these findings suggest that PWM is able to initiate an intracytoplasmic signalling cascade and EGR-1 induction in normal human B cells. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 findings finding NOUN NNS Number=Plur _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 PWM PWM PROPN NNP Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 able able ADJ JJ Degree=Pos _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 initiate initiate VERB VB VerbForm=Inf _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 intracytoplasmic intracytoplasmic ADJ JJ Degree=Pos _ _ _ _ 15 signalling signalling NOUN NN Number=Sing _ _ _ _ 16 cascade cascade NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 EGR Egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 induction induction NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 normal normal ADJ JJ Degree=Pos _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1585 # text = Document 003002578 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002578 003002578 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1586 # text = Autoregulation of the NF-kappa B transactivator RelA (p65) by multiple cytoplasmic inhibitors containing ankyrin motifs. 1 Autoregulation Autoregulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 9 RelA RelA PROPN NNP Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 p65 p65 X LS _ _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 15 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 16 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 17 containing contain VERB VBG VerbForm=Ger _ _ _ _ 18 ankyrin ankyrin ADP IN _ _ _ _ _ 19 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1587 # text = RelA (p65) functions as the critical transactivating component of the heterodimeric p50-p65 NF-kappa B complex and contains a high-affinity binding site for its cytoplasmic inhibitor, I kappa B alpha. 1 RelA Rela NOUN NN Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 functions function NOUN NNS Number=Plur _ _ _ _ 6 as as ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 critical critical ADJ JJ Degree=Pos _ _ _ _ 9 transactivating transactivating NOUN NN Number=Sing _ _ _ _ 10 component component NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 heterodimeric heterodimeric ADJ JJ Degree=Pos _ _ _ _ 14 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 p65 p65 NOUN NN Number=Sing _ _ _ _ 17 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 complex complex NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 affinity affinity NOUN NN Number=Sing _ _ _ _ 28 binding bind VERB VBG VerbForm=Ger _ _ _ _ 29 site site NOUN NN Number=Sing _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 32 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 33 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 36 kappa kappa PROPN NNP Number=Sing _ _ _ _ 37 B b PROPN NNP Number=Sing _ _ _ _ 38 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 1588 # text = After cellular activation, I kappa B alpha is rapidly degraded in concert with the induced nuclear translocation of NF-kappa B. 1 After after ADP IN _ _ _ _ _ 2 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 kappa kappa X FW Foreign=Yes _ _ _ _ 7 B b ADJ JJ Degree=Pos _ _ _ _ 8 alpha alpha NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 rapidly rapidly ADV RB _ _ _ _ _ 11 degraded degrad VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 concert concert NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 translocation translocation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappa kappa PROPN NNP Number=Sing _ _ _ _ 23 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1589 # text = The present study demonstrates that tumor necrosis factor alpha-induced degradation of I kappa B alpha in human T cells is preceded by its rapid phosphorylation in vivo. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 tumor tumor NOUN NN Number=Sing _ _ _ _ 7 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 degradation degradation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B b PROPN NNP Number=Sing _ _ _ _ 17 alpha alpha NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 T T PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 preceded preced VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 26 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 27 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1590 # text = However, these effects on I kappa B alpha result in nuclear mobilization of only a fraction of the entire cytoplasmic pool of RelA. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 effects effect NOUN NNS Number=Plur _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 kappa kappa X GW _ _ _ _ _ 8 B b X GW _ _ _ _ _ 9 alpha alpha X GW _ _ _ _ _ 10 result result NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 mobilization mobilization NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 only only ADV RB _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 fraction fraction NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 entire entire ADJ JJ Degree=Pos _ _ _ _ 21 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 22 pool pool NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 RelA RelA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1591 # text = Subsequent studies have revealed that (i) cytoplasmic RelA is stably associated not only with I kappa B alpha but also with other ankyrin motif-rich proteins including the products of the NF-kappa B2 (p100) and NF-kappa B1 (p105) genes; (ii) in contrast to RelA-I kappa B alpha, RelA-p100 cytoplasmic complexes are not dissociated following tumor necrosis factor alpha activation; (iii) p100 functions as a potent inhibitor of RelA-mediated transcription in vivo; (iv) the interaction of RelA and p100 involves the conserved Rel homology domain of both proteins but not the nuclear localization signal of RelA, which is required for I kappa B alpha binding; (v) p100 inhibition of RelA function requires the C-terminal ankyrin motif domain, which mediates cytoplasmic retention of RelA; and (vi) as observed with I kappa B alpha, nuclear RelA stimulates p100 mRNA and protein expression. 1 Subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 i i PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 10 RelA Rela NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 stably stably ADV RB _ _ _ _ _ 13 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 not not ADV RB _ _ _ _ _ 15 only only ADV RB _ _ _ _ _ 16 with with SCONJ IN _ _ _ _ _ 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B b PROPN NNP Number=Sing _ _ _ _ 20 alpha alpha NOUN NN Number=Sing _ _ _ _ 21 but but CCONJ CC _ _ _ _ _ 22 also also ADV RB _ _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 other other ADJ JJ Degree=Pos _ _ _ _ 25 ankyrin ankyrin NOUN NN Number=Sing _ _ _ _ 26 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 rich rich ADJ JJ Degree=Pos _ _ _ _ 29 proteins protein NOUN NNS Number=Plur _ _ _ _ 30 including include VERB VBG VerbForm=Ger _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 products product NOUN NNS Number=Plur _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 kappa kappa NOUN NN Number=Sing _ _ _ _ 38 B2 b2 NOUN NN Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 p100 p100 NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 kappa kappa PROPN NNP Number=Sing _ _ _ _ 46 B1 B1 PROPN NNP Number=Sing _ _ _ _ 47 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 48 p105 p105 NUM CD NumType=Card _ _ _ SpaceAfter=No 49 ) ) PUNCT -RRB- _ _ _ _ _ 50 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 ; ; PUNCT , _ _ _ _ _ 52 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 53 ii ii X LS _ _ _ _ SpaceAfter=No 54 ) ) PUNCT -RRB- _ _ _ _ _ 55 in in ADP IN _ _ _ _ _ 56 contrast contrast NOUN NN Number=Sing _ _ _ _ 57 to to ADP IN _ _ _ _ _ 58 RelA RelA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 59 - - PUNCT , _ _ _ _ SpaceAfter=No 60 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 61 kappa kappa PROPN NNP Number=Sing _ _ _ _ 62 B b PROPN NNP Number=Sing _ _ _ _ 63 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 64 , , PUNCT , _ _ _ _ _ 65 RelA Rela NOUN NN Number=Sing _ _ _ SpaceAfter=No 66 - - PUNCT , _ _ _ _ SpaceAfter=No 67 p100 p100 NUM CD NumType=Card _ _ _ _ 68 cytoplasmic cytoplasmic NOUN NN Number=Sing _ _ _ _ 69 complexes complex NOUN NNS Number=Plur _ _ _ _ 70 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 71 not not PART RB _ _ _ _ _ 72 dissociated dissociate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 73 following follow VERB VBG VerbForm=Ger _ _ _ _ 74 tumor tumor NOUN NN Number=Sing _ _ _ _ 75 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 76 factor factor NOUN NN Number=Sing _ _ _ _ 77 alpha alpha ADP IN _ _ _ _ _ 78 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 79 ; ; PUNCT , _ _ _ _ _ 80 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 81 iii iii X LS _ _ _ _ SpaceAfter=No 82 ) ) PUNCT -RRB- _ _ _ _ _ 83 p100 p100 NUM CD NumType=Card _ _ _ _ 84 functions function NOUN NNS Number=Plur _ _ _ _ 85 as as ADP IN _ _ _ _ _ 86 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 87 potent potent NOUN NN Number=Sing _ _ _ _ 88 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 89 of of ADP IN _ _ _ _ _ 90 RelA RelA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 91 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 92 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 93 transcription transcription NOUN NN Number=Sing _ _ _ _ 94 in in ADP IN _ _ _ _ _ 95 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 96 ; ; PUNCT , _ _ _ _ _ 97 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 98 iv iv X ADD _ _ _ _ SpaceAfter=No 99 ) ) PUNCT -RRB- _ _ _ _ _ 100 the the DET DT Definite=Def|PronType=Art _ _ _ _ 101 interaction interaction NOUN NN Number=Sing _ _ _ _ 102 of of ADP IN _ _ _ _ _ 103 RelA RelA PROPN NNP Number=Sing _ _ _ _ 104 and and CCONJ CC _ _ _ _ _ 105 p100 p100 NUM CD NumType=Card _ _ _ _ 106 involves involf NOUN NNS Number=Plur _ _ _ _ 107 the the DET DT Definite=Def|PronType=Art _ _ _ _ 108 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 109 Rel Rel NOUN NN Number=Sing _ _ _ _ 110 homology homology NOUN NN Number=Sing _ _ _ _ 111 domain domain NOUN NN Number=Sing _ _ _ _ 112 of of ADP IN _ _ _ _ _ 113 both both DET DT _ _ _ _ _ 114 proteins protein NOUN NNS Number=Plur _ _ _ _ 115 but but CCONJ CC _ _ _ _ _ 116 not not PART RB _ _ _ _ _ 117 the the DET DT Definite=Def|PronType=Art _ _ _ _ 118 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 119 localization localization NOUN NN Number=Sing _ _ _ _ 120 signal signal NOUN NN Number=Sing _ _ _ _ 121 of of ADP IN _ _ _ _ _ 122 RelA RelA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 123 , , PUNCT , _ _ _ _ _ 124 which which PRON WDT PronType=Rel _ _ _ _ 125 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 126 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 127 for for SCONJ IN _ _ _ _ _ 128 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 129 kappa kappa X GW _ _ _ _ _ 130 B b X GW _ _ _ _ _ 131 alpha alpha X GW _ _ _ _ _ 132 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 133 ; ; PUNCT , _ _ _ _ _ 134 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 135 v v NOUN NN Number=Sing _ _ _ SpaceAfter=No 136 ) ) PUNCT -RRB- _ _ _ _ _ 137 p100 p100 NUM CD NumType=Card _ _ _ _ 138 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 139 of of ADP IN _ _ _ _ _ 140 RelA Rela DET DT Definite=Ind|PronType=Art _ _ _ _ 141 function function NOUN NN Number=Sing _ _ _ _ 142 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 143 the the DET DT Definite=Def|PronType=Art _ _ _ _ 144 C- c- NOUN NN Number=Sing _ _ _ SpaceAfter=No 145 terminal terminal NOUN NN Number=Sing _ _ _ _ 146 ankyrin ankyrin ADP IN _ _ _ _ _ 147 motif motif NOUN NN Number=Sing _ _ _ _ 148 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 149 , , PUNCT , _ _ _ _ _ 150 which which PRON WDT PronType=Rel _ _ _ _ 151 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 152 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 153 retention retention NOUN NN Number=Sing _ _ _ _ 154 of of ADP IN _ _ _ _ _ 155 RelA RelA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 156 ; ; PUNCT , _ _ _ _ _ 157 and and CCONJ CC _ _ _ _ _ 158 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 159 vi vi X LS _ _ _ _ SpaceAfter=No 160 ) ) PUNCT -RRB- _ _ _ _ _ 161 as as ADP IN _ _ _ _ _ 162 observed observed ADJ JJ Degree=Pos _ _ _ _ 163 with with ADP IN _ _ _ _ _ 164 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 165 kappa kappa PROPN NNP Number=Sing _ _ _ _ 166 B benefit PROPN NNP Number=Sing _ _ _ _ 167 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 168 , , PUNCT , _ _ _ _ _ 169 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 170 RelA Rela NOUN NN Number=Sing _ _ _ _ 171 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 172 p100 p100 NUM CD NumType=Card _ _ _ _ 173 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 174 and and CCONJ CC _ _ _ _ _ 175 protein protein NOUN NN Number=Sing _ _ _ _ 176 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 177 . . PUNCT . _ _ _ _ _ # sent_id = 1592 # text = These findings thus reveal the presence of a second inducible autoregulated inhibitory pathway that helps ensure the rapid but transient action of nuclear NF-kappa B. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 thus thus ADV RB _ _ _ _ _ 4 reveal reveal VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 presence presence NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 10 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 11 autoregulated autoregulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 13 pathway pathway NOUN NN Number=Sing _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 helps help VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 ensure ensure VERB VB VerbForm=Inf _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 transient transient ADJ JJ Degree=Pos _ _ _ _ 21 action action NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa PROPN NNP Number=Sing _ _ _ _ 27 B. B. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1593 # text = Document 003002582 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002582 003002582 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1594 # text = Functional interaction between the two zinc finger domains of the v-erb A oncoprotein. 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 interaction interaction NOUN NN Number=Sing _ _ _ _ 3 between between ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 two two NUM CD NumType=Card _ _ _ _ 6 zinc zinc NOUN NN Number=Sing _ _ _ _ 7 finger finger NOUN NN Number=Sing _ _ _ _ 8 domains domain NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 v- v- SYM NFP _ _ _ _ SpaceAfter=No 12 erb erb VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 13 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 oncoprotein oncoprotein NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1595 # text = The v-erb 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 v- v- SYM NFP _ _ _ _ SpaceAfter=No 3 erb erb NOUN NN Number=Sing _ _ _ _ # sent_id = 1596 # text = A oncogene of avian erythroblastosis virus is a mutated and virally transduced copy of a host cell gene encoding a thyroid hormone receptor. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 oncogene oncogene NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 avian avian ADJ JJ Degree=Pos _ _ _ _ 5 erythroblastosis erythroblastosis NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 mutated mutate ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 virally virally ADV RB _ _ _ _ _ 12 transduced transduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 copy copy NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 host host NOUN NN Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 thyroid thyroid NOUN NN Number=Sing _ _ _ _ 22 hormone hormone NOUN NN Number=Sing _ _ _ _ 23 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1597 # text = The protein expressed by the v-erb A oncogene binds to DNA and acts as a dominant negative inhibitor of both the thyroid hormone receptor and the closely related retinoic acid receptor. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 v- v- SYM NFP _ _ _ _ SpaceAfter=No 7 erb erb ADJ JJ Degree=Pos _ _ _ _ 8 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 oncogene oncogene ADJ JJ Degree=Pos _ _ _ _ 10 binds bind NOUN NNS Number=Plur _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 DNA Dna NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 18 negative negative ADJ JJ Degree=Pos _ _ _ _ 19 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 both both CCONJ CC _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 thyroid thyroid NOUN NN Number=Sing _ _ _ _ 24 hormone hormone NOUN NN Number=Sing _ _ _ _ 25 receptor receptor NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 closely closely ADV RB _ _ _ _ _ 29 related related ADJ JJ Degree=Pos _ _ _ _ 30 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 31 acid acid ADJ JJ Degree=Pos _ _ _ _ 32 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1598 # text = The v-erb 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 v- v- SYM NFP _ _ _ _ SpaceAfter=No 3 erb erb NOUN NN Number=Sing _ _ _ _ # sent_id = 1599 # text = A protein has sustained two amino acid alterations within its DNA-binding domain relative to that of c-erb A, one of which, at serine 61, is known to be important for v-erb A function in the neoplastic cell. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 sustained sustain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 two two NUM CD NumType=Card _ _ _ _ 6 amino amino DET DT _ _ _ _ _ 7 acid acid ADJ JJ Degree=Pos _ _ _ _ 8 alterations alteration NOUN NNS Number=Plur _ _ _ _ 9 within within ADP IN _ _ _ _ _ 10 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 11 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 binding binding VERB VBG VerbForm=Ger _ _ _ _ 14 domain domain NOUN NN Number=Sing _ _ _ _ 15 relative relative ADV RB _ _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 c- c- SYM NFP _ _ _ _ SpaceAfter=No 20 erb erb NOUN NN Number=Sing _ _ _ _ 21 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 one one NUM CD NumType=Card _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 which which PRON WDT PronType=Int _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 at at ADP IN _ _ _ _ _ 28 serine serine NOUN NN Number=Sing _ _ _ _ 29 61 61 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 to to PART TO _ _ _ _ _ 34 be be AUX VB VerbForm=Inf _ _ _ _ 35 important important ADJ JJ Degree=Pos _ _ _ _ 36 for for ADP IN _ _ _ _ _ 37 v- v- SYM NFP _ _ _ _ SpaceAfter=No 38 erb erb VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 39 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 function function NOUN NN Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 neoplastic neoplastic ADJ JJ Degree=Pos _ _ _ _ 44 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 1600 # text = We report here that the second alteration, at threonine 78, also plays an important, although more indirect, role: alteration of the sequence at threonine 78 such that it resembles that of c-erb 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 7 alteration alteration NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 at at ADP IN _ _ _ _ _ 10 threonine threonine NUM CD NumType=Card _ _ _ _ 11 78 78 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 also also ADV RB _ _ _ _ _ 14 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 important important ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 although although SCONJ IN _ _ _ _ _ 19 more more ADJ JJR Degree=Cmp _ _ _ _ 20 indirect indirect NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 role role NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 : : PUNCT : _ _ _ _ _ 24 alteration alteration NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 sequence sequence NOUN NN Number=Sing _ _ _ _ 28 at at ADP IN _ _ _ _ _ 29 threonine threonine NUM CD NumType=Card _ _ _ _ 30 78 78 NUM CD NumType=Card _ _ _ _ 31 such such ADJ JJ Degree=Pos _ _ _ _ 32 that that SCONJ IN _ _ _ _ _ 33 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 34 resembles resemble VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 c- c- SYM NFP _ _ _ _ SpaceAfter=No 38 erb erb NOUN NN Number=Sing _ _ _ _ # sent_id = 1601 # text = A can act as an intragenic suppressor and can partially restore function to a v-erb 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 can can AUX MD VerbForm=Fin _ _ _ _ 3 act act VERB VB VerbForm=Inf _ _ _ _ 4 as as ADP IN _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 intragenic intragenic ADJ JJ Degree=Pos _ _ _ _ 7 suppressor suppressor NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 can can AUX MD VerbForm=Fin _ _ _ _ 10 partially partially ADV RB _ _ _ _ _ 11 restore restore VERB VB VerbForm=Inf _ _ _ _ 12 function function NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 v- v- SYM NFP _ _ _ _ SpaceAfter=No 16 erb erb NOUN NN Number=Sing _ _ _ _ # sent_id = 1602 # text = A protein rendered defective due to a mutation at position 61. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 rendered render VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 defective defective ADJ JJ Degree=Pos _ _ _ _ 5 due due ADP IN _ _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 mutation mutation NOUN NN Number=Sing _ _ _ _ 9 at at ADP IN _ _ _ _ _ 10 position position NOUN NN Number=Sing _ _ _ _ 11 61 61 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 1603 # text = Threonine 78 lies within the D-box of the v-erb A protein, a region thought to mediate receptor-receptor dimerizations, and is not in physical proximity to the serine at position 61. 1 Threonine Threonine NUM CD NumType=Card _ _ _ _ 2 78 78 NUM CD NumType=Card _ _ _ _ 3 lies lie NOUN NNS Number=Plur _ _ _ _ 4 within within ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 D- d- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 box box NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 v- v- SYM NFP _ _ _ _ SpaceAfter=No 11 erb erb VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 12 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 region region NOUN NN Number=Sing _ _ _ _ 17 thought think VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 receptor receptor NOUN NN Number=Sing _ _ _ _ 23 dimerizations dimerization NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 not not PART RB _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 physical physical ADJ JJ Degree=Pos _ _ _ _ 30 proximity proximity NOUN NN Number=Sing _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 serine serine NOUN NN Number=Sing _ _ _ _ 34 at at ADP IN _ _ _ _ _ 35 position position NOUN NN Number=Sing _ _ _ _ 36 61 61 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 1604 # text = It therefore appears that an indirect interaction occurs between these two sites and that this interaction is crucial for v-erb 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 therefore therefore ADV RB _ _ _ _ _ 3 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 indirect indirect ADJ JJ Degree=Pos _ _ _ _ 7 interaction interaction NOUN NN Number=Sing _ _ _ _ 8 occurs occur NOUN NNS Number=Plur _ _ _ _ 9 between between ADP IN _ _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 two two NUM CD NumType=Card _ _ _ _ 12 sites site NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 16 interaction interaction NOUN NN Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 v- v- SYM NFP _ _ _ _ SpaceAfter=No 21 erb erb NOUN NN Number=Sing _ _ _ _ # sent_id = 1605 # text = A function. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1606 # text = Document 003002583 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002583 003002583 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1607 # text = Abnormal T lymphocyte development induced by targeted overexpression of IkappaB alpha. 1 Abnormal abnormal PROPN NNP Number=Sing _ _ _ _ 2 T T PROPN NNP Number=Sing _ _ _ _ 3 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 4 development development NOUN NN Number=Sing _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 targeted target VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ _ 11 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1608 # text = A role in thymic maturation for factors of the NF-kappaB family has long been suspected, but not yet proven. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 thymic thymic ADJ JJ Degree=Pos _ _ _ _ 5 maturation maturation NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 factors factor NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 family family NOUN NN Number=Sing _ _ _ _ 14 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 long long ADV RB Degree=Pos _ _ _ _ 16 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 17 suspected suspect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 yet yet ADV RB _ _ _ _ _ 22 proven prove VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1609 # text = Transgenic mice with a lymphocyte-specific defect in NF-kappaB activation were produced by targeted expression of human IkappaB alpha. 1 Transgenic Transgenic ADJ JJ Degree=Pos _ _ _ _ 2 mice mouse NOUN NNS Number=Plur _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 defect defect NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 produced produce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 targeted target VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ _ 22 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1610 # text = The thymic cellularity of these mice was significantly decreased. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 thymic thymic ADJ JJ Degree=Pos _ _ _ _ 3 cellularity cellularity NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 mice mouse NOUN NNS Number=Plur _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 significantly significantly ADV RB _ _ _ _ _ 9 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 1611 # text = The proportion of mature, TCRhigh thymocytes of the alphabeta lineage was reduced, and the remaining TCRhigh population contained an unusually high proportion of double-positive cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 proportion proportion NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 mature mature NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 TC tc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 Rhigh Rhigh PROPN NNP Number=Sing _ _ _ _ 8 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 alphabeta alphabeta NOUN NN Number=Sing _ _ _ _ 12 lineage lineage NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 remaining remain VERB VBG VerbForm=Ger _ _ _ _ 19 TC tc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 Rhigh Rhigh PROPN NNP Number=Sing _ _ _ _ 21 population population NOUN NN Number=Sing _ _ _ _ 22 contained contain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 unusually unusually ADV RB _ _ _ _ _ 25 high high ADJ JJ Degree=Pos _ _ _ _ 26 proportion proportion NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 positive positive ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1612 # text = This defect in maturation resulted in a transgene dose-dependent reduction in peripheral T lymphocytes, with the CD8 lineage being more severely affected. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 defect defect NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 maturation maturation NOUN NN Number=Sing _ _ _ _ 5 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 transgene transgene NOUN NN Number=Sing _ _ _ _ 9 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 reduction reduction NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 CD8 Cd8 NOUN NN Number=Sing _ _ _ _ 21 lineage lineage NOUN NN Number=Sing _ _ _ _ 22 being be AUX VBG VerbForm=Ger _ _ _ _ 23 more more ADV RBR _ _ _ _ _ 24 severely severely ADV RB _ _ _ _ _ 25 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1613 # text = These data provide direct evidence for the involvement of NF-kappaB/Rel family proteins in late stages of T lymphocyte development, coincident with positive and negative selection. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 direct direct ADJ JJ Degree=Pos _ _ _ _ 5 evidence evidence NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 involvement involvement NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 14 Rel Rel PROPN NNP Number=Sing _ _ _ _ 15 family family NOUN NN Number=Sing _ _ _ _ 16 proteins protein NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 late late ADJ JJ Degree=Pos _ _ _ _ 19 stages stage NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 23 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 coincident coincident NOUN NN Number=Sing _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 positive positive ADJ JJ Degree=Pos _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 negative negative ADJ JJ Degree=Pos _ _ _ _ 30 selection selection NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1614 # text = Document 003002587 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002587 003002587 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1615 # text = Inhibition of transcription factors belonging to the rel/NF-kappa B family by a transdominant negative mutant. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factors factor NOUN NNS Number=Plur _ _ _ _ 5 belonging belong VERB VBG VerbForm=Ger _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 rel/ relith PUNCT HYPH _ _ _ _ SpaceAfter=No 9 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 family family NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 transdominant transdominant ADJ JJ Degree=Pos _ _ _ _ 17 negative negative ADJ JJ Degree=Pos _ _ _ _ 18 mutant mutant NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1616 # text = The KBF1 factor, which binds to the enhancer 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 KBF1 KBF1 PROPN NNP Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 which which PRON WDT PronType=Rel _ _ _ _ 6 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 enhancer enhancer NOUN NN Number=Sing _ _ _ _ # sent_id = 1617 # text = A located in the promoter of the mouse MHC class I gene H-2Kb, is indistinguishable from the p50 DNA binding subunit of the transcription factor NF-kappa B, which regulates a series of genes involved in immune and inflammatory responses. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 mouse mouse NOUN NN Number=Sing _ _ _ _ 9 MHC MHC PROPN NNP Number=Sing _ _ _ _ 10 class class NOUN NN Number=Sing _ _ _ _ 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 12 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 H h NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 Kb kb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 indistinguishable indistinguishable ADJ JJ Degree=Pos _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 p50 p50 NOUN NN Number=Sing _ _ _ _ 23 DNA dna NOUN NN Number=Sing _ _ _ _ 24 binding binde VERB VBG VerbForm=Ger _ _ _ _ 25 subunit subunit NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 factor factor NOUN NN Number=Sing _ _ _ _ 30 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappa kappa PROPN NNP Number=Sing _ _ _ _ 33 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 which which PRON WDT PronType=Rel _ _ _ _ 36 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 series series NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 genes gene NOUN NNS Number=Plur _ _ _ _ 41 involved involved ADJ JJ Degree=Pos _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 immune immune ADJ JJ Degree=Pos _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 46 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 1618 # text = The KBF1/p50 factor binds as a homodimer but can also form heterodimers with the products of other members of the same family, like the c-rel and v-rel (proto)oncogenes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 KBF1/p50 KBF1/p50 PROPN NNP Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 homodimer homodimer NOUN NN Number=Sing _ _ _ _ 8 but but CCONJ CC _ _ _ _ _ 9 can can AUX MD VerbForm=Fin _ _ _ _ 10 also also ADV RB _ _ _ _ _ 11 form form VERB VB VerbForm=Inf _ _ _ _ 12 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 products product NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 other other ADJ JJ Degree=Pos _ _ _ _ 18 members member NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 same same ADJ JJ Degree=Pos _ _ _ _ 22 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 like like ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 c- c- SYM NFP _ _ _ _ SpaceAfter=No 27 rel rel NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 v-rel v-rel NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 oncogenes oncogene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1619 # text = The dimerization domain of KBF1/p50 is contained between amino acids 201 and 367. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 dimerization dimerization NOUN NN Number=Sing _ _ _ _ 3 domain domain NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 KBF KBF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 p50 p50 NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 contained contain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 between between ADP IN _ _ _ _ _ 12 amino amino DET DT _ _ _ _ _ 13 acids acid NOUN NNS Number=Plur _ _ _ _ 14 201 201 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 367 367 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1620 # text = A mutant of KBF1/p50 (delta SP), unable to bind to DNA but able to form homo- or heterodimers, has been constructed. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 mutant mutant NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 KBF1/ Kbf1/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 p50 p50 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 delta delta NOUN NN Number=Sing _ _ _ _ 8 SP sp NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 unable unable ADJ JJ Degree=Pos _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 bind bind VERB VB VerbForm=Inf _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 DNA dna NOUN NN Number=Sing _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 able able ADJ JJ Degree=Pos _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 form form VERB VB VerbForm=Inf _ _ _ _ 20 homo homo NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 27 constructed construct VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1621 # text = This protein reduces or abolishes in vitro the DNA binding activity of wild-type proteins of the same family (KBF1/p50, c- and v-rel). 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 reduces reduce NOUN NNS Number=Plur _ _ _ _ 4 or or CCONJ CC _ _ _ _ _ 5 abolishes abolish NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 vitro vitro ADP IN Typo=Yes _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 DNA dna NOUN NN Number=Sing _ _ _ _ 10 binding bind VERB VBG VerbForm=Ger _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 type type NOUN NN Number=Sing _ _ _ _ 16 proteins protein NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 same same ADJ JJ Degree=Pos _ _ _ _ 20 family family NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 KBF KBF NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 1/ 1/ PUNCT HYPH _ _ _ _ SpaceAfter=No 24 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 v-rel v-rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1622 # text = This mutant also functions in vivo as a trans-acting dominant negative regulator: the transcriptional inducibility of the HIV long terminal repeat (which contains two potential NF-kappa B binding sites) by phorbol ester (PMA) is inhibited when it is co-transfected into CD4+ T cells with the delta SP mutant. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 mutant mutant NOUN NN Number=Sing _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 functions function NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 vivo vivo NOUN NN Number=Sing _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 trans tran NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 acting act VERB VBG VerbForm=Ger _ _ _ _ 12 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 13 negative negative NOUN NN Number=Sing _ _ _ _ 14 regulator regulator NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 : : PUNCT : _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 inducibility inducibility NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 HIV HIV PROPN NNP Number=Sing _ _ _ _ 22 long long ADJ JJ Degree=Pos _ _ _ _ 23 terminal terminal NOUN NN Number=Sing _ _ _ _ 24 repeat repeat NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 which which PRON WDT PronType=Rel _ _ _ _ 27 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 two two NUM CD NumType=Card _ _ _ _ 29 potential potential ADJ JJ Degree=Pos _ _ _ _ 30 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappa kappa NOUN NN Number=Sing _ _ _ _ 33 B b NOUN NN Number=Sing _ _ _ _ 34 binding binding VERB VBG VerbForm=Ger _ _ _ _ 35 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 by by ADP IN _ _ _ _ _ 38 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 39 ester ester NOUN NN Number=Sing _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 44 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 45 when when ADV WRB PronType=Int _ _ _ _ 46 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 47 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 48 co-transfected co-transfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 49 into into ADP IN _ _ _ _ _ 50 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 51 + + SYM SYM _ _ _ _ _ 52 T t NUM CD NumType=Card _ _ _ _ 53 cells cell NOUN NNS Number=Plur _ _ _ _ 54 with with ADP IN _ _ _ _ _ 55 the the DET DT Definite=Def|PronType=Art _ _ _ _ 56 delta delta PROPN NNP Number=Sing _ _ _ _ 57 SP sp PROPN NNP Number=Sing _ _ _ _ 58 mutant mutant NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 1623 # text = Similarly the basal as well as TNF or IL1-induced activity of the MHC class I H-2Kb promoter can be inhibited by this mutant in two different cell lines. 1 Similarly similarly ADV RB _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 basal basal NOUN NN Number=Sing _ _ _ _ 4 as as ADV RB _ _ _ _ _ 5 well well ADV RB Degree=Pos _ _ _ _ 6 as as ADP IN _ _ _ _ _ 7 TNF TNF PROPN NNP Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 IL1 IL1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 MHC MHC PROPN NNP Number=Sing _ _ _ _ 16 class class NOUN NN Number=Sing _ _ _ _ 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 H h VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 19 -2 -2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 Kb kb NOUN NN Number=Sing _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 can can AUX MD VerbForm=Fin _ _ _ _ 23 be be AUX VB VerbForm=Inf _ _ _ _ 24 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 27 mutant mutant NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 two two NUM CD NumType=Card _ _ _ _ 30 different different ADJ JJ Degree=Pos _ _ _ _ 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1624 # text = These results constitute the first formal demonstration that these genes are regulated by members of the rel/NF-kappa B family. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 constitute constitute VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 first first ADV RBS _ _ _ _ _ 6 formal formal ADJ JJ Degree=Pos _ _ _ _ 7 demonstration demonstration NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 members member NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 rel/ rel/ PUNCT HYPH _ _ _ _ SpaceAfter=No 18 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ _ 22 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1625 # text = Document 003002588 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002588 003002588 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1626 # text = Human MHC class II gene transcription directed by the carboxyl terminus of CIITA, one of the defective genes in type II MHC combined immune deficiency. 1 Human human PROPN NNP Number=Sing _ _ _ _ 2 MHC MHC PROPN NNP Number=Sing _ _ _ _ 3 class class NOUN NN Number=Sing _ _ _ _ 4 II ii NUM CD NumType=Card _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 carboxyl carboxyl NOUN NN Number=Sing _ _ _ _ 11 terminus terminus NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 one one NUM CD NumType=Card _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 defective defective ADJ JJ Degree=Pos _ _ _ _ 19 genes gene NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 type type NOUN NN Number=Sing _ _ _ _ 22 II ii PROPN NNP Number=Sing _ _ _ _ 23 MHC mhc PROPN NNP Number=Sing _ _ _ _ 24 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 immune immune ADJ JJ Degree=Pos _ _ _ _ 26 deficiency deficiency NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1627 # text = Type II major histocompatibility complex combined immune deficiency (type II MHC CID or bare lymphocyte syndrome) is a congenital immunodeficiency disease characterized by absent MHC class II expression. 1 Type type NOUN NN Number=Sing _ _ _ _ 2 II ii NUM CD NumType=Card _ _ _ _ 3 major major ADJ JJ Degree=Pos _ _ _ _ 4 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 5 complex complex NOUN NN Number=Sing _ _ _ _ 6 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 immune immune ADJ JJ Degree=Pos _ _ _ _ 8 deficiency deficiency NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 type type NOUN NN Number=Sing _ _ _ _ 11 II ii NUM CD NumType=Card _ _ _ _ 12 MHC MHC PROPN NNP Number=Sing _ _ _ _ 13 CID CID PROPN NNP Number=Sing _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 bare bear ADJ JJ Degree=Pos _ _ _ _ 16 lymphocyte lymphocyte ADJ JJ Degree=Pos _ _ _ _ 17 syndrome syndrome NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 congenital congenital ADJ JJ Degree=Pos _ _ _ _ 22 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 23 disease disease NOUN NN Number=Sing _ _ _ _ 24 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 absent absent VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 MHC MHC PROPN NNP Number=Sing _ _ _ _ 28 class class NOUN NN Number=Sing _ _ _ _ 29 II ii NUM CD NumType=Card _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1628 # text = Four distinct complementation groups have been identified. 1 Four four NUM CD NumType=Card _ _ _ _ 2 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 3 complementation complementation NOUN NN Number=Sing _ _ _ _ 4 groups group NOUN NNS Number=Plur _ _ _ _ 5 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 7 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 1629 # text = Recently, the defective gene in group II type II MHC CID has been isolated and termed CIITA. 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 defective defective ADJ JJ Degree=Pos _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 group group NOUN NN Number=Sing _ _ _ _ 8 II ii NUM CD NumType=Card _ _ _ _ 9 type type NOUN NN Number=Sing _ _ _ _ 10 II ii NUM CD NumType=Card _ _ _ _ 11 MHC MHC PROPN NNP Number=Sing _ _ _ _ 12 CID CID PROPN NNP Number=Sing _ _ _ _ 13 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 15 isolated isolate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 CIITA CIITa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1630 # text = Here, we demonstrate that CIITA is an MHC class II gene-specific transcription activator. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 MHC MHC PROPN NNP Number=Sing _ _ _ _ 10 class class NOUN NN Number=Sing _ _ _ _ 11 II ii NUM CD NumType=Card _ _ _ _ 12 gene- gene- SYM SYM _ _ _ _ SpaceAfter=No 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 activator activator NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 1631 # text = The transcription activation function is provided by the N-terminal acidic domain (amino acids 26-137), which is experimentally exchangeable with a heterologous viral transcription-activating domain. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 function function NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 provided provide VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 N- N- SYM SYM _ _ _ _ SpaceAfter=No 10 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 11 acidic acidic ADJ JJ Degree=Pos _ _ _ _ 12 domain domain NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 amino amino DET DT _ _ _ _ _ 15 acids acid NOUN NNS Number=Plur _ _ _ _ 16 26 26 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - SYM SYM _ _ _ _ SpaceAfter=No 18 137 137 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 experimentally experimentally ADV RB _ _ _ _ _ 24 exchangeable exchangeable ADJ JJ Degree=Pos _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 28 viral viral ADJ JJ Degree=Pos _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 activating activate VERB VBG VerbForm=Ger _ _ _ _ 32 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1632 # text = The specificity of CIITA for three major MHC class II genes, DR, DQ and DP, is mediated by its remaining C-terminal residues (amino acids 317-1130). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 specificity specificity NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 three three NUM CD NumType=Card _ _ _ _ 7 major major ADJ JJ Degree=Pos _ _ _ _ 8 MHC MHC PROPN NNP Number=Sing _ _ _ _ 9 class class NOUN NN Number=Sing _ _ _ _ 10 II ii NUM CD NumType=Card _ _ _ _ 11 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 DR dr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 DQ Dq PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 DP DP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 23 remaining remain VERB VBG VerbForm=Ger _ _ _ _ 24 C- C- SYM NFP _ _ _ _ SpaceAfter=No 25 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 26 residues residue NOUN NNS Number=Plur _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 amino amino DET DT _ _ _ _ _ 29 acids acid NOUN NNS Number=Plur _ _ _ _ 30 317 317 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - SYM SYM _ _ _ _ SpaceAfter=No 32 1130 1130 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1633 # text = The transactivation of multiple cis elements, especially S and X2, of the DR alpha proximal promoter in group II CID cells is CIITA dependent. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 5 cis cis NOUN NN Number=Sing _ _ _ _ 6 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 especially especially ADV RB _ _ _ _ _ 9 S S NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 X2 X2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 DR Dr PROPN NNP Number=Sing _ _ _ _ 16 alpha alpha PROPN NNP Number=Sing _ _ _ _ 17 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 group group NOUN NN Number=Sing _ _ _ _ 21 II ii NUM CD NumType=Card _ _ _ _ 22 CID Cid ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 CIITA CIITA X GW _ _ _ _ _ 26 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1634 # text = Since CIITA overexpression in normal cells did not increase class II expression, we propose that initiation of CIITA expression serves as the on-off switch, while availability of downstream interactor(s) limits transcription. 1 Since since SCONJ IN _ _ _ _ _ 2 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 3 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 normal normal ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 increase increase VERB VB VerbForm=Inf _ _ _ _ 10 class class NOUN NN Number=Sing _ _ _ _ 11 II ii NUM CD NumType=Card _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 15 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 17 initiation initiation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 serves serve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 as as ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 on on ADP IN _ _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 off off ADJ JJ Degree=Pos _ _ _ _ 27 switch switch NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 while while SCONJ IN _ _ _ _ _ 30 availability availability NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 33 interactor interactor NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 s s X AFX _ _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 limits limit NOUN NNS Number=Plur _ _ _ _ 38 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1635 # text = Document 003002594 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002594 003002594 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1636 # text = Induction of Sp1 phosphorylation and NF-kappa B-independent HIV promoter domain activity in T lymphocytes stimulated by okadaic acid. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 4 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 independent independent ADJ JJ Degree=Pos _ _ _ _ 12 HIV Hiv NOUN NN Number=Sing _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 domain domain NOUN NN Number=Sing _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 19 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 22 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1637 # text = In contrast to the purely enhancer-dependent effect of cytokines such as TNF on the activity of the HIV regulatory region (LTR), we observed that okadaic acid (OKA) activates 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 purely purely ADJ JJ Degree=Pos _ _ _ _ 6 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 9 effect effect NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 12 such such ADJ JJ Degree=Pos _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 TNF TNF PROPN NNP Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 HIV HIV PROPN NNP Number=Sing _ _ _ _ 21 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 22 region region NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 28 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 30 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 31 acid acid NOUN NN Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 OKA OKA NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 activates activate NOUN NNS Number=Plur _ _ _ _ # sent_id = 1638 # text = HIV transcription through both the enhancer, responding to the factor NF-kappa B, and the promoter domain of the LTR. 1 HIV Hiv NOUN NN Number=Sing _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 through through ADP IN _ _ _ _ _ 4 both both CCONJ CC _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 responding respond VERB VBG VerbForm=Ger _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 domain domain NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1639 # text = The inducibility of HIV LTR-driven luciferase expression constructs in lymphoblastoid cells stimulated by OKA depended on both functional Sp1 binding elements and the ability of the TATA box to bind the protein TBP. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inducibility inducibility NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 HIV HIV PROPN NNP Number=Sing _ _ _ _ 5 LTR- LTR- PUNCT : _ _ _ _ SpaceAfter=No 6 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 constructs constructs NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 lymphoblastoid lymphoblastoid ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 OKA OKA PROPN NNP Number=Sing _ _ _ _ 16 depended depend VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 both both DET DT _ _ _ _ _ 19 functional functional ADJ JJ Degree=Pos _ _ _ _ 20 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 21 binding bind VERB VBG VerbForm=Ger _ _ _ _ 22 elements element NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 ability ability NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 TATA TATA PROPN NNP Number=Sing _ _ _ _ 29 box box NOUN NN Number=Sing _ _ _ _ 30 to to PART TO _ _ _ _ _ 31 bind bind VERB VB VerbForm=Inf _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 protein protein NOUN NN Number=Sing _ _ _ _ 34 TBP Tbp NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1640 # text = In both transformed and normal lymphocytes, OKA stimulation induced intense phosphorylation of the constitutively expressed Sp1 protein in the nucleus, a property of OKA not shared by TNF, phorbol ester, or PHA and interleukin 2. 1 In in ADP IN _ _ _ _ _ 2 both both CCONJ CC _ _ _ _ _ 3 transformed transformed VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 normal normal ADJ JJ Degree=Pos _ _ _ _ 6 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 OKA OKA PROPN NNP Number=Sing _ _ _ _ 9 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 intense intense ADJ JJ Degree=Pos _ _ _ _ 12 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 constitutively constitutively ADV RB _ _ _ _ _ 16 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 Sp1 sp1 NUM CD NumType=Card _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 property property NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 OKA OKA PROPN NNP Number=Sing _ _ _ _ 27 not not PART RB _ _ _ _ _ 28 shared share VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 33 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 or or CCONJ CC _ _ _ _ _ 36 PHA PHa PROPN NNP Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 interleukin interleukin ADJ JJ Degree=Pos _ _ _ _ 39 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1641 # text = Responsiveness of LTR constructs deleted of kappa B elements to HIV Tat expression was increased upon OKA but not TNF stimulation. 1 Responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 LTR Ltr PROPN NNP Number=Sing _ _ _ _ 4 constructs construct NOUN NNS Number=Plur _ _ _ _ 5 deleted delet VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 elements element NOUN NNS Number=Plur _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 HIV HIV PROPN NNP Number=Sing _ _ _ _ 12 Tat Tat PROPN NNP Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 upon upon ADP IN _ _ _ _ _ 17 OKA OKA PROPN NNP Number=Sing _ _ _ _ 18 but but CCONJ CC _ _ _ _ _ 19 not not ADV RB _ _ _ _ _ 20 TNF Tnf ADP IN _ _ _ _ _ 21 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1642 # text = Our results suggest that SP1 phosphorylation induced by OKA, a selective inhibitor of the serine-threonine phosphatase PP2A, facilitates the formation of a transcription complex involving general transcription factors, HIV Tat, and Sp1 proteins. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 SP1 SP1 NUM CD NumType=Card _ _ _ _ 6 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 OKA OKA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 selective selective ADJ JJ Degree=Pos _ _ _ _ 13 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 threonine threonine NUM CD NumType=Card _ _ _ _ 19 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 20 PP2 Pp2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 facilitates facilitate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 formation formation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 complex complex NOUN NN Number=Sing _ _ _ _ 30 involving involve VERB VBG VerbForm=Ger _ _ _ _ 31 general general ADJ JJ Degree=Pos _ _ _ _ 32 transcription transcription NOUN NN Number=Sing _ _ _ _ 33 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 HIV HIV PROPN NNP Number=Sing _ _ _ _ 36 Tat Tat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 40 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 1643 # text = The formation of this complex would increase, independently of an in synergy with NF-kappa B, the low basal activity of the HIV LTR observed in normal T lymphocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 formation formation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 complex complex NOUN NN Number=Sing _ _ _ _ 6 would would AUX MD VerbForm=Fin _ _ _ _ 7 increase increase VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 independently independently ADV RB _ _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 synergy synergy NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 low low ADJ JJ Degree=Pos _ _ _ _ 22 basal basal ADJ JJ Degree=Pos _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 HIV HIV PROPN NNP Number=Sing _ _ _ _ 27 LTR LTR PROPN NNP Number=Sing _ _ _ _ 28 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 normal normal ADJ JJ Degree=Pos _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1644 # text = Document 003002595 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002595 003002595 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1645 # text = Functional association of Nmi with Stat5 and Stat1 in IL-2- and IFNgamma-mediated signaling. 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 association association NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Nmi Nmi PROPN NNP Number=Sing _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 Stat5 Stat5 PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 Stat1 Stat1 PROPN NNP Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 IFNgamma IFNgamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1646 # text = Using the coiled-coil region of Stat5b as the bait in a yeast two-hybrid screen, we identified the association of 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 coiled coil VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 coil coil NOUN NN Number=Sing _ _ _ _ 6 region region NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Stat5 Stat5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 b b NOUN NN Number=Sing _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 bait bait NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 yeast yeast ADJ JJS Degree=Sup _ _ _ _ 16 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 hybrid hybrid NOUN NN Number=Sing _ _ _ _ 19 screen screen NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 22 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 association association NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ # sent_id = 1647 # text = Nmi, a protein of unknown function previously reported as an N-Myc interactor. 1 Nmi Nmi INTJ UH _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 unknown unknown ADJ JJ Degree=Pos _ _ _ _ 7 function function NOUN NN Number=Sing _ _ _ _ 8 previously previously ADV RB _ _ _ _ _ 9 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 N N PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 Myc Myc PROPN NNP Number=Sing _ _ _ _ 15 interactor interactor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 1648 # text = We further show that Nmi interacts with all STATs except Stat2. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Nmi Nmi PROPN NNP Number=Sing _ _ _ _ 6 interacts interact VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 all all DET DT _ _ _ _ _ 9 STATs STAT NOUN NNS Number=Plur _ _ _ _ 10 except except ADP IN _ _ _ _ _ 11 Stat2 stat2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 1649 # text = We evaluated two cytokine systems, IL-2 and IFNgamma, and demonstrate that Nmi augments STAT-mediated transcription in response to these cytokines. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 evaluated evaluate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 two two NUM CD NumType=Card _ _ _ _ 4 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 5 systems system NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 IFNgamma IFNgamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 Nmi Nmi PROPN NNP Number=Sing _ _ _ _ 17 augments augment NOUN NNS Number=Plur _ _ _ _ 18 STAT Stat ADV RB _ _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 mediated mediated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 26 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1650 # text = Interestingly, Nmi lacks an intrinsic transcriptional activation domain; instead, Nmi enhances the association of CBP/p300 coactivator proteins with Stat1 and Stat5, and together with CBP/p300 can augment IL-2- and IFNgamma-dependent transcription. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Nmi Nmi PROPN NNP Number=Sing _ _ _ _ 4 lacks lack VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 intrinsic intrinsic ADJ JJ Degree=Pos _ _ _ _ 7 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ; ; PUNCT , _ _ _ _ _ 11 instead instead ADV RB _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 Nmi Nmi PROPN NNP Number=Sing _ _ _ _ 14 enhances enhance VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 association association NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 CBP CBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 / / PUNCT , _ _ _ _ SpaceAfter=No 20 p300 p300 NUM CD NumType=Card _ _ _ _ 21 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 22 proteins protein NOUN NNS Number=Plur _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 Stat1 stat1 PROPN NNP Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 Stat5 stat5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 together together ADV RB _ _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 CBP CBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 / / PUNCT , _ _ _ _ SpaceAfter=No 33 p300 p300 NOUN NN Number=Sing _ _ _ _ 34 can can AUX MD VerbForm=Fin _ _ _ _ 35 augment augment VERB VB VerbForm=Inf _ _ _ _ 36 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 IFNgamma IFNgamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 44 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 1651 # text = Therefore, our data not only reveal that Nmi can potentiate STAT-dependent transcription, but also suggest that it can augment coactivator protein recruitment to at least some members of a group of sequence-specific transcription factors. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 data data NOUN NN Number=Sing _ _ _ _ 5 not not ADV RB _ _ _ _ _ 6 only only ADV RB _ _ _ _ _ 7 reveal reveal VERB VB VerbForm=Inf _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 Nmi Nmi PROPN NNP Number=Sing _ _ _ _ 10 can can AUX MD VerbForm=Fin _ _ _ _ 11 potentiate potentiate VERB VB VerbForm=Inf _ _ _ _ 12 STAT Stat ADV RB _ _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 also also ADV RB _ _ _ _ _ 19 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 22 can can AUX MD VerbForm=Fin _ _ _ _ 23 augment augment VERB VB VerbForm=Inf _ _ _ _ 24 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ _ 26 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 at at ADV RB _ _ _ _ _ 29 least least ADV RBS Degree=Sup _ _ _ _ 30 some some DET DT _ _ _ _ _ 31 members member NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 group group NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 specific specific ADJ JJ Degree=Pos _ _ _ _ 39 transcription transcription NOUN NN Number=Sing _ _ _ _ 40 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1652 # text = Document 003002600 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003002600 003002600 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1653 # text = Vitamin 1 Vitamin Vitamin PROPN NNP Number=Sing _ _ _ _ # sent_id = 1654 # text = D receptor 3'-untranslated region polymorphisms: 1 D would NOUN NN Number=Sing _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ _ 3 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 untranslated untranslated ADJ JJ Degree=Pos _ _ _ _ 7 region region NOUN NN Number=Sing _ _ _ _ 8 polymorphisms polymorphism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 : : PUNCT : _ _ _ _ _ # sent_id = 1655 # text = lack of effect on mRNA stability. 1 lack lack NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 effect effect NOUN NN Number=Sing _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 mRNA mRNA DET DT Definite=Ind|PronType=Art _ _ _ _ 6 stability stability NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1656 # text = Allelic variation at the 3'-end of the vitamin D receptor (VDR) gene has been associated with a 3-5-fold increased risk of developing prostate cancer and with differences in bone mineralization. 1 Allelic Allelic ADJ JJ Degree=Pos _ _ _ _ 2 variation variation NOUN NN Number=Sing _ _ _ _ 3 at at ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 end end NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 vitamin vitamin ADJ JJ Degree=Pos _ _ _ _ 12 D d NOUN NN Number=Sing _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 VDR VDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 20 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - SYM SYM _ _ _ _ SpaceAfter=No 25 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 fold fold VERB VB VerbForm=Inf _ _ _ _ 28 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 risk risk NOUN NN Number=Sing _ _ _ _ 30 of of SCONJ IN _ _ _ _ _ 31 developing develop VERB VBG VerbForm=Ger _ _ _ _ 32 prostate prostate NOUN NN Number=Sing _ _ _ _ 33 cancer cancer NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 differences difference NOUN NNS Number=Plur _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 bone bone ADJ JJ Degree=Pos _ _ _ _ 39 mineralization mineralization NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1657 # text = This genetic diversity does not alter the VDR protein structurally, but instead may be a marker(s) of other, nearby polymorphisms that influence message stability or translation. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 3 diversity diversity NOUN NN Number=Sing _ _ _ _ 4 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 alter alter VERB VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 VDR VDR PROPN NNP Number=Sing _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 structurally structurally ADV RB _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 instead instead ADV RB _ _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 marker marker NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 s s X AFX _ _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 other other ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 nearby nearby ADJ JJ Degree=Pos _ _ _ _ 25 polymorphisms polymorphism NOUN NNS Number=Plur _ _ _ _ 26 that that PRON WDT PronType=Rel _ _ _ _ 27 influence influence VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 message message NOUN NN Number=Sing _ _ _ _ 29 stability stability NOUN NN Number=Sing _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 translation translation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1658 # text = The work reported here was instigated to identify additional VDR 3'-UTR polymorphisms that may have functional significance and to then test whether these genetic variants alter message stability. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 work work NOUN NN Number=Sing _ _ _ _ 3 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 here here ADV RB PronType=Dem _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 instigated instigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 identify identify VERB VB VerbForm=Inf _ _ _ _ 9 additional additional ADJ JJ Degree=Pos _ _ _ _ 10 VDR VDR PROPN NNP Number=Sing _ _ _ _ 11 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 UTR UTR ADJ JJR Degree=Cmp _ _ _ _ 15 polymorphisms polymorphism NOUN NNS Number=Plur _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 may may AUX MD VerbForm=Fin _ _ _ _ 18 have have VERB VB VerbForm=Inf _ _ _ _ 19 functional functional ADJ JJ Degree=Pos _ _ _ _ 20 significance significance NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 then then ADV RB PronType=Dem _ _ _ _ 24 test test NOUN NN Number=Sing _ _ _ _ 25 whether whether SCONJ IN _ _ _ _ _ 26 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 27 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 28 variants variant NOUN NNS Number=Plur _ _ _ _ 29 alter alter NOUN NN Number=Sing _ _ _ _ 30 message message NOUN NN Number=Sing _ _ _ _ 31 stability stability NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1659 # text = Initially, four novel, frequently occurring sequence variants were identified that associated with two common haplotypes that were described previously. 1 Initially initially ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 four four NUM CD NumType=Card _ _ _ _ 4 novel novel NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 frequently frequently ADV RB _ _ _ _ _ 7 occurring occurre VERB VBG VerbForm=Ger _ _ _ _ 8 sequence sequence NOUN NN Number=Sing _ _ _ _ 9 variants variant NOUN NNS Number=Plur _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 two two NUM CD NumType=Card _ _ _ _ 16 common common ADJ JJ Degree=Pos _ _ _ _ 17 haplotypes haplotype NOUN NNS Number=Plur _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 previously previously ADV RB _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1660 # text = These common sequence variants were not found within three message-destabilizing elements that we mapped within the 3'-UTR of the vitamin D receptor mRNA. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 common common ADJ JJ Degree=Pos _ _ _ _ 3 sequence sequence NOUN NN Number=Sing _ _ _ _ 4 variants variant NOUN NNS Number=Plur _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 within within ADP IN _ _ _ _ _ 9 three three NUM CD NumType=Card _ _ _ _ 10 message message NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 destabilizing destabilize VERB VBG VerbForm=Ger _ _ _ _ 13 elements element NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 16 mapped map VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 within within ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 UTR Utr ADP IN _ _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 vitamin vitamin ADJ JJ Degree=Pos _ _ _ _ 26 D would NOUN NN Number=Sing _ _ _ _ 27 receptor receptor NOUN NN Number=Sing _ _ _ _ 28 mRNA mRNA NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1661 # text = Furthermore, the two VDR 3'-UTR haplotypes conferred an identical half-life on a heterologous beta-globin reporter gene, in an in vitro assay. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 VDR Vdr NOUN NN Number=Sing _ _ _ _ 6 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 UTR UTR PROPN NNP Number=Sing _ _ _ _ 10 haplotypes haplotype NOUN NNS Number=Plur _ _ _ _ 11 conferred confer VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 identical identical ADJ JJ Degree=Pos _ _ _ _ 14 half half NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 life life NOUN NN Number=Sing _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 20 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 globin globin ADJ JJ Degree=Pos _ _ _ _ 23 reporter reporter NOUN NN Number=Sing _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 30 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1662 # text = We therefore conclude that common polymorphisms within the VDR 3'-UTR do not influence message stability. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 therefore therefore ADV RB _ _ _ _ _ 3 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 common common ADJ JJ Degree=Pos _ _ _ _ 6 polymorphisms polymorphism NOUN NNS Number=Plur _ _ _ _ 7 within within ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 VDR Vdr PROPN NNP Number=Sing _ _ _ _ 10 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 UTR Utr PROPN NNP Number=Sing _ _ _ _ 14 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 influence influence VERB VB VerbForm=Inf _ _ _ _ 17 message message NOUN NN Number=Sing _ _ _ _ 18 stability stability NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1663 # text = Document 0030031 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030031 0030031 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1664 # text = Circadian rhythm of glucocorticoid receptors in human peripheral leukocytes and their reactivity to glucocorticoids. 1 Circadian Circadian ADJ JJ Degree=Pos _ _ _ _ 2 rhythm rhythm NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 5 receptors receptor NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 9 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 12 reactivity reactivity NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1665 # text = 1) There exists a CR of GR in human leukocytes, PMN, and monocytes with the peak values from 0400 to 0800 hr and the trough values between 2300 and 0000 hr. 1 1 1 X LS _ _ _ _ SpaceAfter=No 2 ) ) PUNCT -RRB- _ _ _ _ _ 3 There there PRON EX _ _ _ _ _ 4 exists exist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 CR Cr NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 GR Gr PROPN NNP Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 PMN Pmn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 peak peak NOUN NN Number=Sing _ _ _ _ 20 values value NOUN NNS Number=Plur _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 0400 0400 NUM CD NumType=Card _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 0800 0800 NUM CD NumType=Card _ _ _ _ 25 hr hr NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 trough trough ADJ JJ Degree=Pos _ _ _ _ 29 values value NOUN NNS Number=Plur _ _ _ _ 30 between between ADP IN _ _ _ _ _ 31 2300 2300 NUM CD NumType=Card _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 0000 0000 NUM CD NumType=Card _ _ _ _ 34 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1666 # text = The difference between them was significant statistically. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 difference difference NOUN NN Number=Sing _ _ _ _ 3 between between ADP IN _ _ _ _ _ 4 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 significant significant ADJ JJ Degree=Pos _ _ _ _ 7 statistically statistically ADV RB _ _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 1667 # text = 2) The FI of the chemotactic migration rate of PMN by cortisol also showed diurnal changes which were synchronous with that of GR. 1 2 2 X LS _ _ _ _ SpaceAfter=No 2 ) ) PUNCT -RRB- _ _ _ _ _ 3 The the DET DT Definite=Def|PronType=Art _ _ _ _ 4 FI fi PROPN NNP Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 chemotactic chemotactic ADJ JJ Degree=Pos _ _ _ _ 8 migration migration NOUN NN Number=Sing _ _ _ _ 9 rate rate NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 PMN PMN PROPN NNP Number=Sing _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 cortisol cortisol PROPN NNP Number=Sing _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 diurnal diurnal ADJ JJ Degree=Pos _ _ _ _ 17 changes change NOUN NNS Number=Plur _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 synchronous synchronous ADJ JJ Degree=Pos _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 GR GR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1668 # text = This indicates that the CR of GR may be of functional significance. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 indicates indicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 CR Cr NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 GR GR PROPN NNP Number=Sing _ _ _ _ 8 may may AUX MD VerbForm=Fin _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 functional functional ADJ JJ Degree=Pos _ _ _ _ 12 significance significance NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 1669 # text = 3) In Cushing's syndrome, the CR of GR was normal in spite of the fact that the CR of plasma cortisol was disturbed. 1 3 3 X LS _ _ _ _ SpaceAfter=No 2 ) ) PUNCT -RRB- _ _ _ _ _ 3 In in ADP IN _ _ _ _ _ 4 Cushing Cushing PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 's 's PART POS _ _ _ _ _ 6 syndrome syndrome NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 CR Cr PROPN NNP Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 GR GR PROPN NNP Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 normal normal ADJ JJ Degree=Pos _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 spite spite NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 fact fact NOUN NN Number=Sing _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 CR Cr NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 plasma plasma NOUN NN Number=Sing _ _ _ _ 24 cortisol cortisol NOUN NN Number=Sing _ _ _ _ 25 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 26 disturbed distur ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1670 # text = This indicates the independency of the CR of GR from that of cortisol. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 indicates indicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 independency independency NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 CR CR PROPN NNP Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 GR GR PROPN NNP Number=Sing _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 cortisol cortisol NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 1671 # text = 4) In apoplexy caused by brain ischemia, the CR of GR was abolished in patients with basal lesions but preserved when the lesions were located in the cerebral cortex. 1 4 4 X LS _ _ _ _ SpaceAfter=No 2 ) ) PUNCT -RRB- _ _ _ _ _ 3 In in ADP IN _ _ _ _ _ 4 apoplexy apoplexy NOUN NN Number=Sing _ _ _ _ 5 caused cause VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 brain brain NOUN NN Number=Sing _ _ _ _ 8 ischemia ischemion NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 CR CR PROPN NNP Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 GR GR PROPN NNP Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 abolished abolish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 patients patient NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 basal basal ADJ JJ Degree=Pos _ _ _ _ 20 lesions lesion NOUN NNS Number=Plur _ _ _ _ 21 but but CCONJ CC _ _ _ _ _ 22 preserved preserve VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 when when ADV WRB PronType=Int _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 lesions lesion NOUN NNS Number=Plur _ _ _ _ 26 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 cerebral cerebral ADJ JJ Degree=Pos _ _ _ _ 31 cortex cortex NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1672 # text = These results strongly suggest that the main "circadian pacemaker" of GR is located in the basal brain, most probably in the suprachiasmatic nuclei as has been suggested for rodents. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 strongly strongly ADV RB _ _ _ _ _ 4 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 main main ADJ JJ Degree=Pos _ _ _ _ 8 " " PUNCT `` _ _ _ _ SpaceAfter=No 9 circadian circadian ADJ JJ Degree=Pos _ _ _ _ 10 pacemaker pacemaker NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 " " PUNCT '' _ _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 GR GR PROPN NNP Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 basal basal ADJ JJ Degree=Pos _ _ _ _ 19 brain brain NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 most most ADV RBS _ _ _ _ _ 22 probably probably ADV RB _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 suprachiasmatic suprachiasmatic ADJ JJ Degree=Pos _ _ _ _ 26 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 27 as as SCONJ IN _ _ _ _ _ 28 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 30 suggested suggest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 rodents rodent NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1673 # text = Document 0030032 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030032 0030032 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1674 # text = Progesterone suppression of pregnancy lymphocytes is not mediated by glucocorticoid effect. 1 Progesterone Progesterone NOUN NN Number=Sing _ _ _ _ 2 suppression suppression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 pregnancy pregnancy ADJ JJ Degree=Pos _ _ _ _ 5 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 11 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1675 # text = This study investigated whether the suppressive effect of progesterone on pregnancy lymphocytes is mediated by specific progesterone receptors. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 whether whether SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 suppressive suppressive ADJ JJ Degree=Pos _ _ _ _ 7 effect effect NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 progesterone progesterone NOUN NN Number=Sing _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 pregnancy pregnancy ADJ JJ Degree=Pos _ _ _ _ 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 progesterone progesterone NOUN NN Number=Sing _ _ _ _ 18 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1676 # text = The effects of a competitive progesterone antagonist (RU486) and a specific glucocorticoid receptor blocker (RU43044) were tested on the release of a blocking factor by progesterone-treated pregnancy lymphocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 competitive competitive ADJ JJ Degree=Pos _ _ _ _ 6 progesterone progesterone NOUN NN Number=Sing _ _ _ _ 7 antagonist antagonist NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 RU486 RU486 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ _ 15 receptor receptor NOUN NN Number=Sing _ _ _ _ 16 blocker blocker NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 RU43044 RU43044 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 tested test VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 on on ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 release release NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 blocking block VERB VBG VerbForm=Ger _ _ _ _ 28 factor factor NOUN NN Number=Sing _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 progesterone progesterone VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 pregnancy pregnancy NOUN NN Number=Sing _ _ _ _ 34 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1677 # text = RU 486 tested at an equal concentration as progesterone significantly inhibited the production of the blocking factor, while RU 43044 was without effect. 1 RU Ru PROPN NNP Number=Sing _ _ _ _ 2 486 486 NUM CD NumType=Card _ _ _ _ 3 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 at at ADP IN _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 equal equal ADJ JJ Degree=Pos _ _ _ _ 7 concentration concentration NOUN NN Number=Sing _ _ _ _ 8 as as SCONJ IN _ _ _ _ _ 9 progesterone progesterone VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 significantly significantly ADV RB _ _ _ _ _ 11 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 production production NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 blocking blocking NOUN NN Number=Sing _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 while while SCONJ IN _ _ _ _ _ 20 RU RU PROPN NNP Number=Sing _ _ _ _ 21 43044 43044 NUM CD NumType=Card _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 without without ADP IN _ _ _ _ _ 24 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1678 # text = These data suggest that in pregnancy, lymphocyte progesterone acts on specific progesterone receptors and glucocorticoid binding sites are not involved. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 pregnancy pregnancy NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 9 progesterone progesterone NOUN NN Number=Sing _ _ _ _ 10 acts act NOUN NNS Number=Plur _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 progesterone progesterone NOUN NN Number=Sing _ _ _ _ 14 receptors receptor NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 glucocorticoid glucocorticoid VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 binding binding VERB VBG VerbForm=Ger _ _ _ _ 18 sites site NOUN NNS Number=Plur _ _ _ _ 19 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 involved involved ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1679 # text = Document 0030033 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030033 0030033 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1680 # text = Infection with Theileria annulata induces expression of matrix metalloproteinase 9 and transcription factor AP-1 in bovine leucocytes. 1 Infection Infection NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 Theileria Theileria PROPN NNP Number=Sing _ _ _ _ 4 annulata annulata PART TO Abbr=Yes _ _ _ _ 5 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 matrix matrix NUM CD NumType=Card _ _ _ _ 9 metalloproteinase metalloproteinase NOUN NN Number=Sing _ _ _ _ 10 9 9 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 bovine bovine ADJ JJ Degree=Pos _ _ _ _ 19 leucocytes leucocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1681 # text = Theileria annulata infects bovine leucocytes and results in their reversible transformation such that they become immortalised and metastatic. 1 Theileria Theileria PROPN NNP Number=Sing _ _ _ _ 2 annulata annulata PART TO Abbr=Yes _ _ _ _ 3 infects infect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 bovine bovine NOUN NN Number=Sing _ _ _ _ 5 leucocytes leucocyte NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 results result NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 10 reversible reversible ADJ JJ Degree=Pos _ _ _ _ 11 transformation transformation NOUN NN Number=Sing _ _ _ _ 12 such such ADJ JJ Degree=Pos _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 15 become become VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 immortalised immortalised ADJ JJ Degree=Pos _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 metastatic metastatic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1682 # text = The present study describes parasite-induced changes in host cell gene expression which have a direct bearing on this transformation process. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 describes describe VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 parasite parasite NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 changes change NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 host host NOUN NN Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 direct direct ADJ JJ Degree=Pos _ _ _ _ 18 bearing bearing NOUN NN Number=Sing _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 21 transformation transformation NOUN NN Number=Sing _ _ _ _ 22 process process NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1683 # text = T. annulata-infected leucocytes produce a number of novel metalloproteinase activities. 1 T. T. PROPN NNP Number=Sing _ _ _ _ 2 annulata annulata NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 leucocytes leucocyte NOUN NNS Number=Plur _ _ _ _ 6 produce produce VERB VB VerbForm=Inf _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 number number NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 novel novel NOUN NN Number=Sing _ _ _ _ 11 metalloproteinase metalloproteinase NOUN NN Number=Sing _ _ _ _ 12 activities activity NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 1684 # text = One of these, previously called B1, is a 97-kDa protein which is secreted in large amounts and has been purified from protein-free, conditioned medium. 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these PRON DT Number=Plur|PronType=Dem _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 previously previously ADV RB _ _ _ _ _ 6 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 B1 b1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 97 97 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kDa kDa NOUN NN Number=Sing _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 secreted secret VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 large large ADJ JJ Degree=Pos _ _ _ _ 20 amounts amount NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 24 purified purify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 from from ADP IN _ _ _ _ _ 26 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 27 free free ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 conditioned condition ADJ JJ Degree=Pos _ _ _ _ 30 medium medium NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1685 # text = An antiserum to this enzyme was used to isolate a cDNA clone. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 antiserum antiserum NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 enzyme enzyme NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 isolate isolate VERB VB VerbForm=Inf _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 12 clone clone NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 1686 # text = The predicted protein sequence of B1 is 81% identical to human matrix metalloproteinase 9 (MMP9), demonstrating that it is the bovine homologue of this enzyme. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 predicted predict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 sequence sequence NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 B1 B1 PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 81 81 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 % % SYM NN Number=Sing _ _ _ _ 10 identical identical ADJ JJ Degree=Pos _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 matrix matrix NOUN NN Number=Sing _ _ _ _ 14 metalloproteinase metalloproteinase NOUN NN Number=Sing _ _ _ _ 15 9 9 NUM CD NumType=Card _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 MMP9 Mmp9 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 demonstrating demonstrat VERB VBG VerbForm=Ger _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 bovine bovine NOUN NN Number=Sing _ _ _ _ 26 homologue homologue NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 29 enzyme enzyme NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1687 # text = RNAase protection assays demonstrated that the MMP9 activity, unique to infected cells, is due to increased MMP9 mRNA levels. 1 RNAase RNAase NOUN NN Number=Sing _ _ _ _ 2 protection protection NOUN NN Number=Sing _ _ _ _ 3 assays assays NOUN NNS Number=Plur _ _ _ _ 4 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 MMP9 MMP9 PROPN NNP Number=Sing _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 unique unique ADJ JJ Degree=Pos _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 due due ADP IN _ _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 MMP9 MMP9 PROPN NNP Number=Sing _ _ _ _ 20 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 21 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1688 # text = We also assayed the levels of transcription factor AP-1 and demonstrated that it was constitutively present in increased amounts in Theileria-infected cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 assayed assay VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 levels level NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 constitutively constitutively ADV RB _ _ _ _ _ 18 present present ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 amounts amount NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 Theileria Theileria PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1689 # text = In addition we assayed the level of mRNA encoding c-Fos, a common component of AP-1 and observed that it was indeed up-regulated in infected cells. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 assayed assay VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 level level NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 9 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 10 c- c- SYM NFP _ _ _ _ SpaceAfter=No 11 Fos Fos PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 common common ADJ JJ Degree=Pos _ _ _ _ 15 component component NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 that that SCONJ IN _ _ _ _ _ 23 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 indeed indeed ADV RB _ _ _ _ _ 26 up up ADV RB _ _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 infected infect ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1690 # text = Since AP-1 is implicated in the control of the cell cycle, and MMP9 can confer metastatic properties, these results are of considerable significance with respect to the transformed phenotype induced by Theileria infection. 1 Since since ADP IN _ _ _ _ _ 2 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 control control NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 MMP9 MMP9 PROPN NNP Number=Sing _ _ _ _ 17 can can AUX MD VerbForm=Fin _ _ _ _ 18 confer confer VERB VB VerbForm=Inf _ _ _ _ 19 metastatic metastatic ADJ JJ Degree=Pos _ _ _ _ 20 properties property NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 23 results result NOUN NNS Number=Plur _ _ _ _ 24 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 considerable considerable ADJ JJ Degree=Pos _ _ _ _ 27 significance significance NOUN NN Number=Sing _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 respect respect NOUN NN Number=Sing _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 34 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 Theileria Theileria PROPN NNP Number=Sing _ _ _ _ 37 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1691 # text = Document 0030036 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030036 0030036 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1692 # text = Tyloxapol inhibits NF-kappa B and cytokine release, scavenges HOCI, and reduces viscosity of cystic fibrosis sputum. 1 Tyloxapol Tyloxapol PROPN NNP Number=Sing _ _ _ _ 2 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 9 release release NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 scavenges scavenge VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 HOCI HOCI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 reduces reduce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 viscosity viscosity NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 cystic cystic ADJ JJ Degree=Pos _ _ _ _ 19 fibrosis fibrosis NOUN NN Number=Sing _ _ _ _ 20 sputum sputum NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1693 # text = Cystic fibrosis (CF) patients develop progressive cytokine-mediated inflammatory lung disease, with abundant production of thick, tenacious, protease- and oxidant-rich purulent airway secretions that are difficult to clear even with physiotherapy. 1 Cystic Cystic ADJ JJ Degree=Pos _ _ _ _ 2 fibrosis fibrosis NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 CF CF NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 patients patient NOUN NNS Number=Plur _ _ _ _ 7 develop develop VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 progressive progressive ADJ JJ Degree=Pos _ _ _ _ 9 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 13 lung lung NOUN NN Number=Sing _ _ _ _ 14 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 abundant abundant ADJ JJ Degree=Pos _ _ _ _ 18 production production NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 thick thick ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 tenacious tenacious ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 protease protease NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 oxidant oxidant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 rich rich ADJ JJ Degree=Pos _ _ _ _ 30 purulent purulent ADJ JJ Degree=Pos _ _ _ _ 31 airway airway NOUN NN Number=Sing _ _ _ _ 32 secretions secretion NOUN NNS Number=Plur _ _ _ _ 33 that that PRON WDT PronType=Rel _ _ _ _ 34 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 difficult difficult ADJ JJ Degree=Pos _ _ _ _ 36 to to PART TO _ _ _ _ _ 37 clear clear VERB VB VerbForm=Inf _ _ _ _ 38 even even ADV RB _ _ _ _ _ 39 with with ADP IN _ _ _ _ _ 40 physiotherapy physiotherapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 1694 # text = In the search for a potential treatment, we have tested tyloxapol, an alkylaryl polyether alcohol polymer detergent previously used as a mucolytic agent in adult chronic bronchitis. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 search search NOUN NN Number=Sing _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 potential potential ADJ JJ Degree=Pos _ _ _ _ 7 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 10 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 tyloxapol tyloxapol NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 alkylaryl alkylaryl ADJ JJ Degree=Pos _ _ _ _ 16 polyether polyether NOUN NN Number=Sing _ _ _ _ 17 alcohol alcohol NOUN NN Number=Sing _ _ _ _ 18 polymer polymer NOUN NN Number=Sing _ _ _ _ 19 detergent detergent NOUN NN Number=Sing _ _ _ _ 20 previously previously ADV RB _ _ _ _ _ 21 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 as as ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 mucolytic mucolytic ADJ JJ Degree=Pos _ _ _ _ 25 agent agent NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 adult adult NOUN NN Number=Sing _ _ _ _ 28 chronic chronic NOUN NN Number=Sing _ _ _ _ 29 bronchitis bronchitis NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1695 # text = Tyloxapol inhibits activation of the transcription factor nuclear factor-kappa B (NK-kappa B), reduces resting secretion of the cytokine interleukin-8 (IL-8) in cultured human monocytes, and inhibits lipopolysaccharide (LPS)-stimulated release of tumor necrosis factor-alpha (TNF-alpha), IL-1 beta, IL-6, IL-8, granulocyte-macrophage colony-stimulating factor (GM-CSF), and the eiconsanoids thromboxane A2 and leukotriene B4 (LTB4). 1 Tyloxapol Tyloxapol ADJ JJ Degree=Pos _ _ _ _ 2 inhibits inhibits NOUN NNS Number=Plur _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 NK Nk NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 reduces reduce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 resting rest VERB VBG VerbForm=Ger _ _ _ _ 22 secretion secretion NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 26 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 8 8 NUM CD NumType=Card _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 8 8 X LS _ _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 cultured culture ADJ JJ Degree=Pos _ _ _ _ 36 human human ADJ JJ Degree=Pos _ _ _ _ 37 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 inhibits inhibits PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 41 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 release release NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 tumor tumor NOUN NN Number=Sing _ _ _ _ 50 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 51 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 alpha alpha NOUN NN Number=Sing _ _ _ _ 54 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 55 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 57 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 59 , , PUNCT , _ _ _ _ _ 60 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 61 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 62 1 1 NUM CD NumType=Card _ _ _ _ 63 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 64 , , PUNCT , _ _ _ _ _ 65 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 66 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 67 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 68 , , PUNCT , _ _ _ _ _ 69 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 70 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 71 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 72 , , PUNCT , _ _ _ _ _ 73 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 74 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 75 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 76 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 77 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 78 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 79 factor factor NOUN NN Number=Sing _ _ _ _ 80 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 81 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 82 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 83 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 84 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 85 , , PUNCT , _ _ _ _ _ 86 and and CCONJ CC _ _ _ _ _ 87 the the DET DT Definite=Def|PronType=Art _ _ _ _ 88 eiconsanoids eiconsanoid NOUN NNS Number=Plur _ _ _ _ 89 thromboxane thromboxane NOUN NN Number=Sing _ _ _ _ 90 A2 a2 NOUN NN Number=Sing _ _ _ _ 91 and and CCONJ CC _ _ _ _ _ 92 leukotriene leukotriene NOUN NN Number=Sing _ _ _ _ 93 B4 B4 PROPN NNP Number=Sing _ _ _ _ 94 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 95 LTB4 LTB4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 96 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 97 . . PUNCT . _ _ _ _ _ # sent_id = 1696 # text = We have previously shown that tyloxapol is a potent antioxidant for hydroxyl radicals ( OH). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 tyloxapol tyloxapol NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 potent potent NOUN NN Number=Sing _ _ _ _ 10 antioxidant antioxidant NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 hydroxyl hydroxyl NOUN NN Number=Sing _ _ _ _ 13 radicals radical NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ _ 15 OH oh INTJ UH _ _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1697 # text = Tyloxapol (0.05 to 0.1% wt/vol) effectively scavenges the oxidant hypochlorous acid (HOCl; 1 to 7.5 mM) in vitro, and protects from HOCl-mediated lung injury in rats. 1 Tyloxapol Tyloxapol PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 0.05 0.05 NUM CD NumType=Card _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 0.1 0.1 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 % % SYM NN Number=Sing _ _ _ _ 7 wt wt ADJ JJS Degree=Sup _ _ _ SpaceAfter=No 8 /vol /vol NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 effectively effectively ADV RB _ _ _ _ _ 11 scavenges scavenge VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 oxidant oxidant ADJ JJ Degree=Pos _ _ _ _ 14 hypochlorous hypochlorous ADJ JJ Degree=Pos _ _ _ _ 15 acid acid NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 HOCl HOCl NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ; ; PUNCT , _ _ _ _ _ 19 1 1 NUM CD NumType=Card _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 7.5 7.5 NUM CD NumType=Card _ _ _ _ 22 mM mm NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 protects protect NOUN NNS Number=Plur _ _ _ _ 29 from from ADP IN _ _ _ _ _ 30 HOCl HOCl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 lung lung NOUN NN Number=Sing _ _ _ _ 34 injury injury NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 rats rat NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 1698 # text = Tyloxapol also reduces the viscosity of CF sputum (from 463 +/- 133 to 128 +/- 52 centipoise). 1 Tyloxapol Tyloxapol PROPN NNP Number=Sing _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 reduces reduce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 viscosity viscosity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 CF CF PROPN NNP Number=Sing _ _ _ _ 8 sputum sputum NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 from from ADP IN _ _ _ _ _ 11 463 463 NUM CD NumType=Card _ _ _ _ 12 +/- +/- SYM SYM _ _ _ _ _ 13 133 133 NUM CD NumType=Card _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 128 128 NUM CD NumType=Card _ _ _ _ 16 +/- +/- SYM SYM _ _ _ _ _ 17 52 52 NUM CD NumType=Card _ _ _ _ 18 centipoise centipoise NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1699 # text = We conclude that tyloxapol is potentially useful as a new antiinflammatory therapy for CF lung disease, and could possibly promote clearance of secretions in the CF airway. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 tyloxapol tyloxapol NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 potentially potentially ADV RB _ _ _ _ _ 7 useful useful ADJ JJ Degree=Pos _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 new new ADJ JJ Degree=Pos _ _ _ _ 11 antiinflammatory antiinflammatory ADJ JJ Degree=Pos _ _ _ _ 12 therapy therapy NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 CF CF PROPN NNP Number=Sing _ _ _ _ 15 lung lung NOUN NN Number=Sing _ _ _ _ 16 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 could could AUX MD VerbForm=Fin _ _ _ _ 20 possibly possibly ADV RB _ _ _ _ _ 21 promote promote VERB VB VerbForm=Inf _ _ _ _ 22 clearance clearance NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 secretions secretion NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 CF CF PROPN NNP Number=Sing _ _ _ _ 28 airway airway NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1700 # text = Document 0030039 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030039 0030039 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1701 # text = The murine BCL6 gene is induced in activated lymphocytes as an immediate early gene. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 murine murine NOUN NN Number=Sing _ _ _ _ 3 BCL6 Bcl6 NOUN NN Number=Sing _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 13 early early ADJ JJ Degree=Pos _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1702 # text = The chromosomal translocation involving 3q27 is often detected in human B-cell lymphomas, especially diffuse lymphomas with a large-cell component. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 chromosomal chromosomal NOUN NN Number=Sing _ _ _ _ 3 translocation translocation NOUN NN Number=Sing _ _ _ _ 4 involving involve VERB VBG VerbForm=Ger _ _ _ _ 5 3q27 3q27 NUM CD NumType=Card _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 often often ADV RB _ _ _ _ _ 8 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 lymphomas lymphoma NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 especially especially ADV RB _ _ _ _ _ 17 diffuse diffuse ADJ JJ Degree=Pos _ _ _ _ 18 lymphomas lymphoma NOUN NNS Number=Plur _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 large large ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 component component NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1703 # text = The BCL6 gene has been isolated from the chromosomal breakpoint in these lymphomas. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 BCL6 Bcl6 PROPN NNP Number=Sing _ _ _ _ 3 gene gene PROPN NNP Number=Sing _ _ _ _ 4 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 6 isolated isolate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 chromosomal chromosomal ADJ JJ Degree=Pos _ _ _ _ 10 breakpoint breakpoint NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 13 lymphomas lymphoma NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 1704 # text = Here we cloned the murine BCL6 (mBCL6) cDNA from the muscle cDNA library using the human BCL6 (hBCL6) cDNA as a probe. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 cloned clon VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 murine murine NOUN NN Number=Sing _ _ _ _ 6 BCL6 Bcl6 PROPN NNP Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 mBCL6 mBCL6 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 muscle muscle NOUN NN Number=Sing _ _ _ _ 14 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 15 library library NOUN NN Number=Sing _ _ _ _ 16 using use VERB VBG VerbForm=Ger _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 BCL6 Bcl6 NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 hBCL6 hBCL6 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 probe probe NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1705 # text = The predicted amino acid sequence was 95% identical to that of hBCL6. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 predicted predict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 amino amino DET DT _ _ _ _ _ 4 acid acid ADJ JJ Degree=Pos _ _ _ _ 5 sequence sequence NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 95 95 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 % % SYM NN Number=Sing _ _ _ _ 9 identical identical ADJ JJ Degree=Pos _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 hBCL6 hbcl6 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 1706 # text = It contains six repeats of the Kruppel-like zinc-finger motif that are completely identical to those of hBCL6, indicating that the BCL6 gene is well conserved between humans and mice. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 six six NUM CD NumType=Card _ _ _ _ 4 repeats repeat NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 Kruppel Kruppel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 like like ADJ JJ Degree=Pos _ _ _ _ 10 zinc zinc NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 finger finger NOUN NN Number=Sing _ _ _ _ 13 motif motif NOUN NN Number=Sing _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 completely completely ADV RB _ _ _ _ _ 17 identical identical ADJ JJ Degree=Pos _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 hBCL6 hBCL6 NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 BCL6 Bcl6 PROPN NNP Number=Sing _ _ _ _ 27 gene gene PROPN NNP Number=Sing _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 well well ADV RB Degree=Pos _ _ _ _ 30 conserved conserve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 between between ADP IN _ _ _ _ _ 32 humans human NOUN NNS Number=Plur _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1707 # text = Expression of the mBCL6 gene was ubiquitously detected in adult mouse tissues including lymphatic organs. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mBCL6 mbcl6 PROPN NNP Number=Sing _ _ _ _ 5 gene gene PROPN NNP Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 ubiquitously ubiquitously ADV RB _ _ _ _ _ 8 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 adult adult NOUN NN Number=Sing _ _ _ _ 11 mouse mouse NOUN NN Number=Sing _ _ _ _ 12 tissues tissue NOUN NNS Number=Plur _ _ _ _ 13 including include VERB VBG VerbForm=Ger _ _ _ _ 14 lymphatic lymphatic ADJ JJ Degree=Pos _ _ _ _ 15 organs organ NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 1708 # text = Furthermore, it was induced in lymphocytes activated with phorbol ester and Ca2+ ionophore within 30 min after stimulation. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 8 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 11 ester ester NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 Ca2 ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 + + SYM SYM _ _ _ _ _ 15 ionophore ionophore ADJ JJ Degree=Pos _ _ _ _ 16 within within ADP IN _ _ _ _ _ 17 30 30 NUM CD NumType=Card _ _ _ _ 18 min min NOUN NNS Number=Plur _ _ _ _ 19 after after ADP IN _ _ _ _ _ 20 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1709 # text = This induction was not inhibited by treatment of the cells with a protein synthesis inhibitor, cycloheximide. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 treatment treatment NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 15 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1710 # text = These results suggest that BCL6 plays a role in activated lymphocytes as an immediate early gene. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 BCL6 Bcl6 PROPN NNP Number=Sing _ _ _ _ 6 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 activated activated ADJ JJ Degree=Pos _ _ _ _ 11 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 15 early early ADJ JJ Degree=Pos _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1711 # text = Document 00300310 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300310 00300310 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1712 # text = Differences in phosphorylation of the IL-2R associated JAK/STAT proteins between HTLV-I(+), IL-2-independent and IL-2-dependent cell lines and uncultured leukemic cells from patients with adult T-cell lymphoma/leukemia. 1 Differences difference NOUN NNS Number=Plur _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2R 2r PROPN NNP Number=Sing _ _ _ _ 9 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 JAK JAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 STAT Stat PROPN NNP Number=Sing _ _ _ _ 13 proteins protein NOUN NNS Number=Plur _ _ _ _ 14 between between ADP IN _ _ _ _ _ 15 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 +) +) SYM NFP _ _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 independent independent ADJ JJ Degree=Pos _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 lines line NOUN NNS Number=Plur _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 uncultured uncultured ADJ JJ Degree=Pos _ _ _ _ 36 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ _ 38 from from ADP IN _ _ _ _ _ 39 patients patient NOUN NNS Number=Plur _ _ _ _ 40 with with ADP IN _ _ _ _ _ 41 adult adult NOUN NN Number=Sing _ _ _ _ 42 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 cell cell NOUN NN Number=Sing _ _ _ _ 44 lymphoma/ lymphomaith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 45 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1713 # text = To determine activation status of the IL-2R-associated (Jak/STAT) pathway in the HTLV-I infected cells, we examined tyrosine phosphorylation of Jak3, STAT3, and STAT5 in several HTLV-I(+) 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 status status NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 IL- Il- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 2R-associated 2R-associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 Jak/ Jakith X ADD _ _ _ _ SpaceAfter=No 11 STAT STAT NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 pathway pathway NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 19 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 23 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 tyrosine tyrosine PRON PRP _ _ _ _ _ 25 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 Jak3 Jak3 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 STAT3 STAT3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 STAT5 STAT5 NUM CD NumType=Card _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 several several ADJ JJ Degree=Pos _ _ _ _ 35 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT , _ _ _ _ SpaceAfter=No 37 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 +) +) SYM NFP _ _ _ _ _ # sent_id = 1714 # text = T-cell lines and in uncultured leukemic T cells isolated from patients with adult T-cell lymphoma/leukemia (ATLL). 1 T- T- SYM NFP _ _ _ _ SpaceAfter=No 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 lines line NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 uncultured uncultured ADJ JJ Degree=Pos _ _ _ _ 7 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 patients patient NOUN NNS Number=Plur _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 adult adult NOUN NN Number=Sing _ _ _ _ 15 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 lymphoma/leukemia lymphoma/leukemia NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 ATLL ATLL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1715 # text = Constitutive basal phosphorylation of Jak3 and, usually, STAT3 and STAT5 was detected in all four IL-2-independent cell lines tested, but in none of the three IL-2-dependent cell lines. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 basal basal ADJ JJ Degree=Pos _ _ _ _ 3 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Jak3 Jak3 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 usually usually ADV RB _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 STAT3 STAT3 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 STAT5 stat5 PROPN NNP Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 all all DET DT _ _ _ _ _ 17 four four NUM CD NumType=Card _ _ _ _ 18 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - SYM SYM _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 -independent -independent ADJ JJ Degree=Pos _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 lines line NOUN NNS Number=Plur _ _ _ _ 24 tested tested VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 but but CCONJ CC _ _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 none none NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 three three NUM CD NumType=Card _ _ _ _ 32 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 1716 # text = Similarly, there was no detectable basal phosphorylation of Jak3 and STAT5 in the leukemic cells from ATLL patients (0/8 and 0/3, respectively). 1 Similarly similarly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 there there PRON EX _ _ _ _ _ 4 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 no no DET DT _ _ _ _ _ 6 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 7 basal basal ADJ JJ Degree=Pos _ _ _ _ 8 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 Jak3 Jak3 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 STAT5 STAT5 NUM CD NumType=Card _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 ATLL Atll DET DT _ _ _ _ _ 19 patients patient NOUN NNS Number=Plur _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 0/8 0/8 NUM CD NumType=Card _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 0/3 0/3 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1717 # text = However, stimulation with IL-2 resulted in Jak3 and STAT5 phosphorylation in both leukemic ATLL cells and IL-2-dependent lines. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 Jak3 Jak3 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 STAT5 STAT5 NUM CD NumType=Card _ _ _ _ 13 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 both both DET DT _ _ _ _ _ 16 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 17 ATLL Atll NOUN NN Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 25 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1718 # text = Furthermore, expression of SHP-1 phosphatase which is a negative regulator of cytokine receptor signaling, was lost in most IL-2 independent cell lines (3/4) but not in the leukemic ATLL cells (0/3). 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 SHP SHP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 9 which which PRON WDT PronType=Rel _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 negative negative ADJ JJ Degree=Pos _ _ _ _ 13 regulator regulator NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ _ 17 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 lost lose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 most most ADJ JJS Degree=Sup _ _ _ _ 23 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ _ 26 independent independent ADJ JJ Degree=Pos _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 lines line NOUN NNS Number=Plur _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 3/ 3/ SYM SYM _ _ _ _ SpaceAfter=No 31 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 but but CCONJ CC _ _ _ _ _ 34 not not ADV RB _ _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 38 ATLL Atll NOUN NN Number=Sing _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 0/3 0/3 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 1719 # text = Finally, the HTLV-I(+) 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 +) +) SYM NFP _ _ _ _ _ # sent_id = 1720 # text = T-cell lines (313) but not the control, HTLV-I(-) 1 T- T- SYM NFP _ _ _ _ SpaceAfter=No 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 lines line NOUN NNS Number=Plur _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 313 313 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 but but CCONJ CC _ _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 control control NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT : _ _ _ _ SpaceAfter=No 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 -) -) PUNCT . _ _ _ _ _ # sent_id = 1721 # text = T-cell lines were resistant to rapamycin and its novel analog RAD. 1 T- T- SYM NFP _ _ _ _ SpaceAfter=No 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 lines line NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 rapamycin rapamycin VERB VB VerbForm=Inf _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 10 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 novel novel VERB VB VerbForm=Inf _ _ _ _ 12 analog analog ADJ JJ Degree=Pos _ _ _ _ 13 RAD Rad NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 1722 # text = We conclude that (1) HTLV-I infection per se does not result in a constitutive phosphorylation of the Jak3, STAT3, and STAT5 proteins; (2) malignant transformation in at least some cases of ATLL does not require the constitutive, but may require IL-2-induced, activation of the IL-2R Jak/STAT pathway; and (3) there are major differences in T-cell immortalization mechanism(s) which appear to involve SHP-1 and target molecules for rapamycin and RAD. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 1 1 X LS _ _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 infection infection VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 per per ADP IN _ _ _ _ _ 12 se se NOUN NN Number=Sing _ _ _ _ 13 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 result result VERB VB VerbForm=Inf _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 19 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 Jak3 Jak3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 STAT3 STAT3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 STAT5 STAT5 NOUN NN Number=Sing _ _ _ _ 28 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 ; ; PUNCT , _ _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 2 2 X LS _ _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 malignant malignant ADJ JJ Degree=Pos _ _ _ _ 34 transformation transformation NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 at at ADV RB _ _ _ _ _ 37 least least ADV RBS Degree=Sup _ _ _ _ 38 some some DET DT _ _ _ _ _ 39 cases case NOUN NNS Number=Plur _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 ATLL ATLL NOUN NN Number=Sing _ _ _ _ 42 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 43 not not PART RB _ _ _ _ _ 44 require require VERB VB VerbForm=Inf _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 constitutive constitutive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 but but CCONJ CC _ _ _ _ _ 49 may may AUX MD VerbForm=Fin _ _ _ _ 50 require require VERB VB VerbForm=Inf _ _ _ _ 51 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 56 , , PUNCT , _ _ _ _ _ 57 activation activation NOUN NN Number=Sing _ _ _ _ 58 of of ADP IN _ _ _ _ _ 59 the the DET DT Definite=Def|PronType=Art _ _ _ _ 60 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 61 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 62 2R 2R PROPN NNP Number=Sing _ _ _ _ 63 Jak/ Jak/ PUNCT HYPH _ _ _ _ SpaceAfter=No 64 STAT Stat PROPN NNP Number=Sing _ _ _ _ 65 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 66 ; ; PUNCT , _ _ _ _ _ 67 and and CCONJ CC _ _ _ _ _ 68 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 69 3 3 X LS _ _ _ _ SpaceAfter=No 70 ) ) PUNCT -RRB- _ _ _ _ _ 71 there there PRON EX _ _ _ _ _ 72 are be VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 73 major major ADJ JJ Degree=Pos _ _ _ _ 74 differences difference NOUN NNS Number=Plur _ _ _ _ 75 in in ADP IN _ _ _ _ _ 76 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 77 cell cell NOUN NN Number=Sing _ _ _ _ 78 immortalization immortalization NOUN NN Number=Sing _ _ _ _ 79 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 80 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 81 s s X AFX _ _ _ _ SpaceAfter=No 82 ) ) PUNCT -RRB- _ _ _ _ _ 83 which which PRON WDT PronType=Rel _ _ _ _ 84 appear appear VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 85 to to PART TO _ _ _ _ _ 86 involve involve VERB VB VerbForm=Inf _ _ _ _ 87 SHP sHp NOUN NN Number=Sing _ _ _ SpaceAfter=No 88 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 89 1 1 NUM CD NumType=Card _ _ _ _ 90 and and CCONJ CC _ _ _ _ _ 91 target target NOUN NN Number=Sing _ _ _ _ 92 molecules molecule NOUN NNS Number=Plur _ _ _ _ 93 for for ADP IN _ _ _ _ _ 94 rapamycin rapamycin NOUN NN Number=Sing _ _ _ _ 95 and and CCONJ CC _ _ _ _ _ 96 RAD Rad NOUN NN Number=Sing _ _ _ SpaceAfter=No 97 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1723 # text = Document 00300311 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300311 00300311 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1724 # text = Glucocorticoid-induced cell death requires autoinduction of glucocorticoid receptor expression in human leukemic T cells. 1 Glucocorticoid Glucocorticoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 death death NOUN NN Number=Sing _ _ _ _ 6 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 autoinduction autoinduction NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1725 # text = In contrast to the negative autoregulation of glucocorticoid receptor (GR) expression seen in most cells and tissues, GR expression is positively autoregulated in human leukemic T cells and in other cells sensitive to glucocorticoid-induced cell death. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 negative negative ADJ JJ Degree=Pos _ _ _ _ 6 autoregulation autoregulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 GR GR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 seen see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 most most ADJ JJS Degree=Sup _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 GR GR PROPN NNP Number=Sing _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 positively positively ADV RB _ _ _ _ _ 25 autoregulated autoregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 human human ADJ JJ Degree=Pos _ _ _ _ 28 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 29 T t PROPN NNP Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 other other ADJ JJ Degree=Pos _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ _ 35 sensitive sensitive VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 36 to to PART TO _ _ _ _ _ 37 glucocorticoid glucocorticoid VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 1726 # text = To determine whether positive autoregulation is a necessary component of glucocorticoid-induced cell death, a wild-type GR gene under the control of a tetracycline-regulated promoter was stably transfected into glucocorticoid-resistant cells lacking endogenous functional receptor. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 positive positive ADJ JJ Degree=Pos _ _ _ _ 5 autoregulation autoregulation NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 9 component component NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 type type NOUN NN Number=Sing _ _ _ _ 21 GR Gr NOUN NN Number=Sing _ _ _ _ 22 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 under under ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 control control NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 tetracycline tetracycline NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 promoter promoter NOUN NN Number=Sing _ _ _ _ 32 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 33 stably stably ADV RB _ _ _ _ _ 34 transfected transfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 into into ADP IN _ _ _ _ _ 36 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 resistant resistant NOUN NN Number=Sing _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ _ 40 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 41 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 42 functional functional ADJ JJ Degree=Pos _ _ _ _ 43 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 1727 # text = Transfectants grown in the presence of tetracycline contained about 15,000 receptors/cell, a value approximately equal to basal level GR expression in glucocorticoid-sensitive 6TG1.1 cells before steroid treatment. 1 Transfectants Transfectant NOUN NNS Number=Plur _ _ _ _ 2 grown grow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 presence presence NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 tetracycline tetracycline NOUN NN Number=Sing _ _ _ _ 8 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 about about ADV RB _ _ _ _ _ 10 15,000 15,000 NUM CD NumType=Card _ _ _ _ 11 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 value value NOUN NN Number=Sing _ _ _ _ 17 approximately approximately ADV RB _ _ _ _ _ 18 equal equal ADJ JJ Degree=Pos _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 basal basal ADJ JJ Degree=Pos _ _ _ _ 21 level level NOUN NN Number=Sing _ _ _ _ 22 GR Gr NOUN NN Number=Sing _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 28 6TG1.1 6tg1.1 NUM CD NumType=Card _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 before before ADP IN _ _ _ _ _ 31 steroid steroid ADJ JJ Degree=Pos _ _ _ _ 32 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1728 # text = Under these conditions, dexamethasone had a minimal effect on cell growth, elicited little internucleosomal DNA fragmentation, and induced no cell cycle perturbation. 1 Under under ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 dexamethasone dexamethasone PRON NN Number=Sing _ _ _ _ 6 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 9 effect effect NOUN NN Number=Sing _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 elicited elicit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 little little ADJ JJ Degree=Pos _ _ _ _ 16 internucleosomal internucleosomal ADJ JJ Degree=Pos _ _ _ _ 17 DNA dna NOUN NN Number=Sing _ _ _ _ 18 fragmentation fragmentation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 no no DET DT _ _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 cycle cycle NOUN NN Number=Sing _ _ _ _ 25 perturbation perturbation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1729 # text = In the absence of tetracycline, GR mRNA and protein expression increased 2-3-fold, and cells expressed 48,000 receptors, a level nearly equivalent to that present in 6TG1.1 cells after 18 h of autoinduction. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 absence absence NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 tetracycline tetracycline NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 GR GR PROPN NNP Number=Sing _ _ _ _ 8 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 protein protein VERB VB VerbForm=Inf _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 48,000 48,000 NUM CD NumType=Card _ _ _ _ 23 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 level level NOUN NN Number=Sing _ _ _ _ 27 nearly nearly ADV RB _ _ _ _ _ 28 equivalent equivalent ADJ JJ Degree=Pos _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 31 present present ADJ JJ Degree=Pos _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 6TG1.1 6TG1.1 NUM CD NumType=Card _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ _ 35 after after ADP IN _ _ _ _ _ 36 18 18 NUM CD NumType=Card _ _ _ _ 37 h h NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 autoinduction autoinduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1730 # text = Under these conditions, dexamethasone markedly inhibited cell growth, caused G1 arrest, and induced significant internucleosomal DNA fragmentation. 1 Under under ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 dexamethasone dexamethasone VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 markedly markedly ADV RB _ _ _ _ _ 7 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 G1 G1 NUM CD NumType=Card _ _ _ _ 13 arrest arrest NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 significant significant ADJ JJ Degree=Pos _ _ _ _ 18 internucleosomal internucleosomal ADJ JJ Degree=Pos _ _ _ _ 19 DNA dna NOUN NN Number=Sing _ _ _ _ 20 fragmentation fragmentation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1731 # text = These studies therefore suggest that basal level GR expression is inadequate to mediate glucocorticoid-induced apoptosis in glucocorticoid-sensitive T cells and that positive autoregulation is a necessary component of this process. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 therefore therefore ADV RB _ _ _ _ _ 4 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 basal basal ADJ JJ Degree=Pos _ _ _ _ 7 level level NOUN NN Number=Sing _ _ _ _ 8 GR Gr NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 inadequate inadequate ADJ JJ Degree=Pos _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 14 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 26 positive positive ADJ JJ Degree=Pos _ _ _ _ 27 autoregulation autoregulation NOUN NN Number=Sing _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 31 component component NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 34 process process NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1732 # text = Document 00300312 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300312 00300312 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1733 # text = Modulation of normal erythroid differentiation by the endogenous thyroid hormone and retinoic acid receptors: 1 Modulation Modulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 normal normal ADJ JJ Degree=Pos _ _ _ _ 4 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 5 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 9 thyroid thyroid NOUN NN Number=Sing _ _ _ _ 10 hormone hormone NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 13 acid acid ADJ JJ Degree=Pos _ _ _ _ 14 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 : : PUNCT : _ _ _ _ _ # sent_id = 1734 # text = a possible target for v-erbA oncogene action. 1 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 possible possible ADJ JJ Degree=Pos _ _ _ _ 3 target target NOUN NN Number=Sing _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 v- v- SYM NFP _ _ _ _ SpaceAfter=No 6 erbA erbA SYM SYM _ _ _ _ _ 7 oncogene oncogene ADJ JJ Degree=Pos _ _ _ _ 8 action action NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1735 # text = The v-erbA oncogene, a mutated version of the thyroid hormone receptor alpha (c-erbA/TR-alpha), inhibits erythroid differentiation and constitutively represses transcription of certain erythrocyte genes, suggesting a normal function of the proto-oncogene c-erbA in erythropoiesis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 v- v- SYM NFP _ _ _ _ SpaceAfter=No 3 erbA erba PROPN NNP Number=Sing _ _ _ _ 4 oncogene oncogene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 version version NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 thyroid thyroid NOUN NN Number=Sing _ _ _ _ 12 hormone hormone NOUN NN Number=Sing _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ _ 14 alpha alpha NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 c- c- PUNCT , _ _ _ _ SpaceAfter=No 17 erbA/TR-alpha erbA/TR-alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 22 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 constitutively constitutively ADV RB _ _ _ _ _ 25 represses repress VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 certain certain ADJ JJ Degree=Pos _ _ _ _ 29 erythrocyte erythrocyte NOUN NN Number=Sing _ _ _ _ 30 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 normal normal ADJ JJ Degree=Pos _ _ _ _ 35 function function NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 -oncogene -oncogene NOUN NN Number=Sing _ _ _ _ 40 c- c- PUNCT : _ _ _ _ SpaceAfter=No 41 erbA erbA PROPN NNP Number=Sing _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 erythropoiesis erythropoiesis PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 1736 # text = Here we demonstrate that the endogenous thyroid hormone receptor alpha (c-erbA/TR-alpha) and the closely related retinoic acid receptor alpha (RAR-alpha) play a role in the regulation of normal erythroid differentiation. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 7 thyroid thyroid NOUN NN Number=Sing _ _ _ _ 8 hormone hormone NOUN NN Number=Sing _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ _ 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 c- c- X GW _ _ _ _ SpaceAfter=No 13 erbA/TR- erbA/TR- X GW _ _ _ _ SpaceAfter=No 14 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 closely closely ADV RB _ _ _ _ _ 19 related related ADJ JJ Degree=Pos _ _ _ _ 20 retinoic retinoic X GW _ _ _ _ _ 21 acid acid X GW _ _ _ _ _ 22 receptor receptor X GW _ _ _ _ _ 23 alpha alpha X GW _ _ _ _ _ 24 ( ( X GW _ _ _ _ SpaceAfter=No 25 RAR Rar X GW _ _ _ _ SpaceAfter=No 26 - - X GW _ _ _ _ SpaceAfter=No 27 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 play play VERB VB VerbForm=Inf _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 role role NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 regulation regulation NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 normal normal ADJ JJ Degree=Pos _ _ _ _ 37 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 38 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 1737 # text = Retinoic acid (RA) distinctly modulated the erythroid differentiation program of normal erythroid progenitors and erythroblasts reversibly transformed by a conditional tyrosine kinase oncogene. 1 Retinoic Retinoic ADJ JJ Degree=Pos _ _ _ _ 2 acid acid NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 RA RA X AFX _ _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 distinctly distinctly ADV RB _ _ _ _ _ 7 modulated modulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 10 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 11 program program NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 normal normal ADJ JJ Degree=Pos _ _ _ _ 14 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 15 progenitors progenitor NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 erythroblasts erythroblast NOUN NNS Number=Plur _ _ _ _ 18 reversibly reversibly ADV RB _ _ _ _ _ 19 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 conditional conditional ADJ JJ Degree=Pos _ _ _ _ 23 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 24 kinase kinase NOUN NN Number=Sing _ _ _ _ 25 oncogene oncogene NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1738 # text = When added pulsewise to immature cells, differentiation was accelerated while more mature cells underwent premature cell death. 1 When when ADV WRB PronType=Int _ _ _ _ 2 added add VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 pulsewise pulsewise NOUN NN Number=Sing _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 immature immature ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 accelerated accelerated VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 while while SCONJ IN _ _ _ _ _ 12 more more ADV RBR _ _ _ _ _ 13 mature mature ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 underwent underwent ADJ JJ Degree=Pos _ _ _ _ 16 premature premature ADJ JJ Degree=Pos _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1739 # text = Thyroid hormone (T3) alone caused similar but weaker effects. 1 Thyroid thyroid ADJ JJ Degree=Pos _ _ _ _ 2 hormone hormone NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 T3 T3 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 alone alone PRON NN Number=Sing _ _ _ _ 7 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 similar similar ADJ JJ Degree=Pos _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 weaker weaker ADJ JJ Degree=Pos _ _ _ _ 11 effects effect NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 1740 # text = Interestingly, T3 strongly enhanced the action of RA, suggesting cooperative action of the two receptors in modulating erythroid differentiation. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 T3 T3 NUM CD NumType=Card _ _ _ _ 4 strongly strongly ADV RB _ _ _ _ _ 5 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 action action NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 12 cooperative cooperative ADJ JJ Degree=Pos _ _ _ _ 13 action action NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 two two NUM CD NumType=Card _ _ _ _ 17 receptors receptor NOUN NNS Number=Plur _ _ _ _ 18 in in SCONJ IN _ _ _ _ _ 19 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 20 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 21 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1741 # text = Expression of the human RAR-alpha in receptor-negative erythroblasts conferred RA-induced regulation of differentiation to the otherwise unresponsive cells, thus showing that the RAR-alpha is essential for the RA effect. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 RAR Rar NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 negative negative ADJ JJ Degree=Pos _ _ _ _ 12 erythroblasts erythroblast NOUN NNS Number=Plur _ _ _ _ 13 conferred confer VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 regulation regulation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 otherwise otherwise ADJ JJ Degree=Pos _ _ _ _ 23 unresponsive unresponsive ADJ JJ Degree=Pos _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 thus thus ADV RB _ _ _ _ _ 27 showing show VERB VBG VerbForm=Ger _ _ _ _ 28 that that SCONJ IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 RAR Rar NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 alpha alpha NOUN NN Number=Sing _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 essential essential ADJ JJ Degree=Pos _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 RA RA PROPN NNP Number=Sing _ _ _ _ 38 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 1742 # text = Likewise, enhanced expression of exogenous c-erbA/TR-alpha in erythroblasts rendered them susceptible to modulation of differentiation by T3, suggesting a similar function of both receptors. 1 Likewise likewise ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 7 c- c- PUNCT : _ _ _ _ SpaceAfter=No 8 erbA/TR-alpha erbA/TR-alpha NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 erythroblasts erythroblast NOUN NNS Number=Plur _ _ _ _ 11 rendered render VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ _ 13 susceptible susceptible ADJ JJ Degree=Pos _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 modulation modulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 T3 T3 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 similar similar ADJ JJ Degree=Pos _ _ _ _ 24 function function NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 both both DET DT _ _ _ _ _ 27 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1743 # text = Document 00300319 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300319 00300319 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1744 # text = The internal methionine codons of human T-cell leukemia virus type II rex gene are not required for p24rex production or virus replication and transformation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 internal internal ADJ JJ Degree=Pos _ _ _ _ 3 methionine methionine NOUN NN Number=Sing _ _ _ _ 4 codons codon NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 10 virus virus NOUN NN Number=Sing _ _ _ _ 11 type type NOUN NN Number=Sing _ _ _ _ 12 II ii NUM CD NumType=Card _ _ _ _ 13 rex rex NOUN NN Number=Sing _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 p24rex p24rex NOUN NN Number=Sing _ _ _ _ 20 production production NOUN NN Number=Sing _ _ _ _ 21 or or CCONJ CC _ _ _ _ _ 22 virus virus NOUN NN Number=Sing _ _ _ _ 23 replication replication NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 transformation transformation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1745 # text = Human T-cell leukemia virus types I (HTLV-I) and II (HTLV-II) have two nonstructural trans-acting regulatory genes, tax and rex, located in the 3' region of the viral genome. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 types type NOUN NNS Number=Plur _ _ _ _ 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 II II PROPN NNP Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 II ii PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 two two NUM CD NumType=Card _ _ _ _ 22 nonstructural nonstructural ADJ JJ Degree=Pos _ _ _ _ 23 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 acting act VERB VBG VerbForm=Ger _ _ _ _ 26 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 27 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 tax tax NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 rex rex NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 ' ' PUNCT `` _ _ _ _ _ 38 region region NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 viral viral ADJ JJ Degree=Pos _ _ _ _ 42 genome genome NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 1746 # text = The tax gene product (HTLV-I p40tax and HTLV-II p37tax) is the transcriptional activator of the viral long terminal repeat. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 tax tax NOUN NN Number=Sing _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ _ 4 product product NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 p40 p40 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 tax tax NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 II ii NUM CD NumType=Card _ _ _ _ 15 p37tax p37tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 20 activator activator NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 viral viral ADJ JJ Degree=Pos _ _ _ _ 24 long long ADJ JJ Degree=Pos _ _ _ _ 25 terminal terminal NOUN NN Number=Sing _ _ _ _ 26 repeat repeat VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1747 # text = The rex gene encodes two protein products, p27rex/p21rex and p26rex/p24rex in HTLV-I and HTLV-II, respectively. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 rex rex NOUN NN Number=Sing _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ _ 4 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 two two NUM CD NumType=Card _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 products product NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 p27rex/ p27rex/ SYM NFP _ _ _ _ SpaceAfter=No 10 p21rex p21rex NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 p26rex/ p26rexith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 13 p24rex p24rex NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 II ii PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1748 # text = Rex acts posttranscriptionally to facilitate accumulation of full-length gag/pol and singly spliced env mRNA in the cytoplasm of HTLV-infected cells. 1 Rex Rex NOUN NN Number=Sing _ _ _ _ 2 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 posttranscriptionally posttranscriptionally ADV RB _ _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 facilitate facilitate VERB VB VerbForm=Inf _ _ _ _ 6 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 full full ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 length length NOUN NN Number=Sing _ _ _ _ 11 gag gag NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 pol pol NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 singly singly ADV RB _ _ _ _ _ 16 spliced splice VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 env env NOUN NN Number=Sing _ _ _ _ 18 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1749 # text = Previous studies showed that the first ATG of the rex gene is critical for Rex production and function. 1 Previous previous ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 7 ATG Atg NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 rex rex NOUN NN Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 critical critical ADJ JJ Degree=Pos _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 Rex Rex NOUN NN Number=Sing _ _ _ _ 16 production production NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1750 # text = The importance of the internal ATGs to Rex function is not known. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 importance importance NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 internal internal ADJ JJ Degree=Pos _ _ _ _ 6 ATGs ATGs NOUN NNS Number=Plur _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 Rex Rex NOUN NN Number=Sing _ _ _ _ 9 function function NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 known known ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 1751 # text = However, in vitro mutagenesis of the HTLV-I rex gene has provided indirect evidence which suggests that p21rex, and by analogy HTLV-II p24rex, results from initiation at an internal AUG of the tax/rex mRNA. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 5 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 rex rex VERB VB VerbForm=Inf _ _ _ _ 12 gene gene PRON NN Number=Sing _ _ _ _ 13 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 provided provide VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 indirect indirect ADJ JJ Degree=Pos _ _ _ _ 16 evidence evidence NOUN NN Number=Sing _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 20 p21rex p21rex NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 analogy analogy NOUN NN Number=Sing _ _ _ _ 25 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 II ii NUM CD NumType=Card _ _ _ _ 28 p24rex p24rex NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 results result NOUN NNS Number=Plur _ _ _ _ 31 from from ADP IN _ _ _ _ _ 32 initiation initiation NOUN NN Number=Sing _ _ _ _ 33 at at ADP IN _ _ _ _ _ 34 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 internal internal ADJ JJ Degree=Pos _ _ _ _ 36 AUG Aug NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 / / PUNCT , _ _ _ _ SpaceAfter=No 41 rex rex NOUN NN Number=Sing _ _ _ _ 42 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 1752 # text = By using an infectious molecular clone of HTLV-II, we investigated the importance of the internal ATGs of the rex gene on Rex protein production and function. 1 By by SCONJ IN _ _ _ _ _ 2 using use VERB VBG VerbForm=Ger _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 infectious infectious ADJ JJ Degree=Pos _ _ _ _ 5 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 6 clone clone NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 II II PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 13 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 importance importance NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 internal internal ADJ JJ Degree=Pos _ _ _ _ 19 ATGs ATGs NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 rex rex NOUN NN Number=Sing _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 Rex Rex NOUN NN Number=Sing _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ _ 27 production production NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1753 # text = Our results indicate that p24rex of HTLV-II is not initiated at an internal AUG and that the internal methionine codons are not crucial to the function of the rex gene and, ultimately, the transforming properties of the virus. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 p24rex p24rex NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 II II PROPN NNP Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 initiated initiate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 at at ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 internal internal ADJ JJ Degree=Pos _ _ _ _ 16 AUG Aug NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 internal internal ADJ JJ Degree=Pos _ _ _ _ 21 methionine methionine NOUN NN Number=Sing _ _ _ _ 22 codons codon NOUN NNS Number=Plur _ _ _ _ 23 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 not not PART RB _ _ _ _ _ 25 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 function function NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 rex rex NOUN NN Number=Sing _ _ _ _ 32 gene gene NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 ultimately ultimately ADV RB _ _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 transforming transforming VERB VBG VerbForm=Ger _ _ _ _ 39 properties property NOUN NNS Number=Plur _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1754 # text = Document 00300320 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300320 00300320 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1755 # text = [Induction of apoptosis in lymphocytes by glucocorticoids: between physiology and pharmacology] 1 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 Induction Induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 : : PUNCT : _ _ _ _ _ 10 between between ADP IN _ _ _ _ _ 11 physiology physiology NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 pharmacology pharmacology NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 1756 # text = Glucocorticoids are physiological molecules that are also extensively used in clinics as anti-inflammatory, immunosuppressive or anti-tumoral agents. 1 Glucocorticoids Glucocorticoid NOUN NNS Number=Plur _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 physiological physiological ADJ JJ Degree=Pos _ _ _ _ 4 molecules molecule NOUN NNS Number=Plur _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 extensively extensively ADV RB _ _ _ _ _ 9 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 clinics clinic NOUN NNS Number=Plur _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 anti-tumoral anti-tumoral ADJ JJ Degree=Pos _ _ _ _ 18 agents agent NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1757 # text = Glucocorticoids can induce apoptosis on normal lymphoid cells and play a key role in the physiology of thymic selection. 1 Glucocorticoids Glucocorticoid NOUN NNS Number=Plur _ _ _ _ 2 can can AUX MD VerbForm=Fin _ _ _ _ 3 induce induce VERB VB VerbForm=Inf _ _ _ _ 4 apoptosis apoptosis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 normal normal ADJ JJ Degree=Pos _ _ _ _ 7 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 play play VERB VB VerbForm=Inf _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 key key ADJ JJ Degree=Pos _ _ _ _ 13 role role NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 physiology physiology NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 thymic thymic ADJ JJ Degree=Pos _ _ _ _ 19 selection selection NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1758 # text = In clinics these molecules are also used for their potencies in inducing apoptosis of malignant lymphoid cells. 1 In in ADP IN _ _ _ _ _ 2 clinics clinic NOUN NNS Number=Plur _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 molecules molecule NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 10 potencies potency NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 inducing induce NOUN NN Number=Sing _ _ _ _ 13 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 malignant malignant ADJ JJ Degree=Pos _ _ _ _ 16 lymphoid lymphoid NOUN NN Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1759 # text = Glucocorticoids are mediating their effects after binding to an intracellular receptor belonging to the steroid receptor superfamily: the glucocorticoid receptor (GR). 1 Glucocorticoids Glucocorticoid NOUN NNS Number=Plur _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 mediating mediat VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 4 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 after after SCONJ IN _ _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 belonging belong VERB VBG VerbForm=Ger _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 steroid steroid NOUN NN Number=Sing _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ _ 17 superfamily superfamily ADV RB _ _ _ _ SpaceAfter=No 18 : : PUNCT : _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 GR GR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1760 # text = Once activated, the GR, can mediate his effects through direct binding on the DNA or via protein/protein interactions with transcription factors. 1 Once once SCONJ IN _ _ _ _ _ 2 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 GR Gr NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 can can AUX MD VerbForm=Fin _ _ _ _ 8 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 9 his he PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 10 effects effect NOUN NNS Number=Plur _ _ _ _ 11 through through ADP IN _ _ _ _ _ 12 direct direct ADJ JJ Degree=Pos _ _ _ _ 13 binding binding VERB VBG VerbForm=Ger _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 via via ADP IN _ _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 protein protein NOUN NN Number=Sing _ _ _ _ 22 interactions interaction NOUN NNS Number=Plur _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1761 # text = Depending on the type of lymphocytes, the mechanism of apoptosis induced by glucocorticoids fall roughly in two categories: induction of "death genes" by the activated GR (I kappa B, c-jun) or repression of survival factors (AP-1, c-Myc). 1 Depending depend VERB VBG VerbForm=Ger _ _ _ _ 2 on on ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 apoptosis apoptosis DET DT Number=Sing|PronType=Dem _ _ _ _ 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 15 fall fall VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 roughly roughly ADV RB _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 two two NUM CD NumType=Card _ _ _ _ 19 categories category NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 : : PUNCT : _ _ _ _ _ 21 induction induction NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 " " PUNCT `` _ _ _ _ SpaceAfter=No 24 death death NOUN NN Number=Sing _ _ _ _ 25 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 " " PUNCT '' _ _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 GR Gr NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 33 kappa kappa PROPN NNP Number=Sing _ _ _ _ 34 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 c- c- SYM NFP _ _ _ _ SpaceAfter=No 37 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 or or CCONJ CC _ _ _ _ _ 40 repression repression NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 survival survival NOUN NN Number=Sing _ _ _ _ 43 factors factor NOUN NNS Number=Plur _ _ _ _ 44 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 45 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 Myc Myc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 1762 # text = In the case of thymic selection the mechanism is more subtle depending on the mutual repression of Nur77 and GR. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 case case NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 thymic thymic ADJ JJ Degree=Pos _ _ _ _ 6 selection selection NOUN NN Number=Sing _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 more more ADV RBR _ _ _ _ _ 11 subtle subtle ADJ JJ Degree=Pos _ _ _ _ 12 depending depend VERB VBG VerbForm=Ger _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 mutual mutual ADJ JJ Degree=Pos _ _ _ _ 16 repression repression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 Nur77 Nur77 NUM CD NumType=Card _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 GR Gr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1763 # text = Document 00300324 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300324 00300324 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1764 # text = Phosphorylation of the transcription factor NFATp inhibits its DNA binding activity in cyclosporin A-treated human B and T cells. 1 Phosphorylation Phosphorylation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 7 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 9 DNA dna NOUN NN Number=Sing _ _ _ _ 10 binding binde VERB VBG VerbForm=Ger _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 14 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1765 # text = Cyclosporin A (CsA) exerts its immunosuppressive effect by inhibiting the activity of nuclear factor of activated T cells (NFAT), thus preventing transcriptional induction of several cytokine genes. 1 Cyclosporin Cyclosporin PROPN NNP Number=Sing _ _ _ _ 2 A a PROPN NNP Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 exerts exert VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 8 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 9 effect effect NOUN NN Number=Sing _ _ _ _ 10 by by SCONJ IN _ _ _ _ _ 11 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 thus thus ADV RB _ _ _ _ _ 26 preventing prevent VERB VBG VerbForm=Ger _ _ _ _ 27 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 28 induction induction NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 several several ADJ JJ Degree=Pos _ _ _ _ 31 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 32 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1766 # text = This effect is thought to be largely mediated through inactivation of the phosphatase calcineurin, which in turn inhibits translocation of an NFAT component to the nucleus. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 largely largely ADV RB _ _ _ _ _ 8 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 through through ADP IN _ _ _ _ _ 10 inactivation inactivation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 14 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 turn turn VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 20 translocation translocation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 24 component component NOUN NN Number=Sing _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1767 # text = Here we report that CsA treatment of Raji B and Jurkat T cell lines yields a phosphorylated form of NFATp that is inhibited in DNA-binding and in its ability to form an NFAT complex with Fos and Jun. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 CsA csa PROPN NNP Number=Sing _ _ _ _ 6 treatment treatment NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Raji Raji PROPN NNP Number=Sing _ _ _ _ 9 B b PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 12 T T PROPN NNP Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 lines line NOUN NNS Number=Plur _ _ _ _ 15 yields yield ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 form form NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 21 that that PRON WDT PronType=Rel _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 binding binding VERB VBG VerbForm=Ger _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 31 ability ability NOUN NN Number=Sing _ _ _ _ 32 to to PART TO _ _ _ _ _ 33 form form VERB VB VerbForm=Inf _ _ _ _ 34 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 36 complex complex NOUN NN Number=Sing _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 Fos Fos PROPN NNP Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 1768 # text = Immunoblot analyses and metabolic labeling with [32P]orthophosphate show that CsA alters NFATp migration on SDS-polyacrylamide gel electrophoresis by increasing its phosphorylation level without affecting subcellular distribution. 1 Immunoblot Immunoblot ADJ JJ Degree=Pos _ _ _ _ 2 analyses analysis NOUN NNS Number=Plur _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 metabolic metabolic ADJ JJ Degree=Pos _ _ _ _ 5 labeling labeling NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 32P] 32P] PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 orthophosphate orthophosphate ADJ JJ Degree=Pos _ _ _ _ 10 show show NOUN NN Number=Sing _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 CsA csa PROPN NNP Number=Sing _ _ _ _ 13 alters alter PROPN NNPS Number=Plur _ _ _ _ 14 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 15 migration migration NOUN NN Number=Sing _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 SDS SDS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 polyacrylamide polyacrylamide NOUN NN Number=Sing _ _ _ _ 20 gel gel NOUN NN Number=Sing _ _ _ _ 21 electrophoresis electrophoresis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 by by SCONJ IN _ _ _ _ _ 23 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 24 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 25 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 26 level level NOUN NN Number=Sing _ _ _ _ 27 without without SCONJ IN _ _ _ _ _ 28 affecting affect VERB VBG VerbForm=Ger _ _ _ _ 29 subcellular subcellular ADJ JJ Degree=Pos _ _ _ _ 30 distribution distribution NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1769 # text = Dephosphorylation by in vitro treatment with calcineurin or alkaline phosphatase restores NFATp DNA binding activity and its ability to reconstitute an NFAT complex with Fos and Jun proteins. 1 Dephosphorylation Dephosphorylation NOUN NN Number=Sing _ _ _ _ 2 by by ADP IN _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 5 treatment treatment NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 alkaline alkaline NOUN NN Number=Sing _ _ _ _ 10 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 11 restores restore NOUN NNS Number=Plur _ _ _ _ 12 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 13 DNA dna PROPN NNP Number=Sing _ _ _ _ 14 binding binde VERB VBG VerbForm=Ger _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 ability ability NOUN NN Number=Sing _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 reconstitute reconstitute VERB VB VerbForm=Inf _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 23 complex complex NOUN NN Number=Sing _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 Fos Fos PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 Jun Jun PROPN NNP Number=Sing _ _ _ _ 28 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1770 # text = These data point to a new mechanism for CsA-sensitive regulation of NFATp in which dephosphorylation is critical for DNA binding. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 point point VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 new new ADJ JJ Degree=Pos _ _ _ _ 7 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 12 regulation regulation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 dephosphorylation dephosphorylation NOUN NN Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 critical critical ADJ JJ Degree=Pos _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 DNA dna NOUN NN Number=Sing _ _ _ _ 22 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1771 # text = Document 00300327 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300327 00300327 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1772 # text = A mutation of the glucocorticoid receptor in primary cortisol resistance. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 mutation mutation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 primary primary ADJ JJ Degree=Pos _ _ _ _ 9 cortisol cortisol NOUN NN Number=Sing _ _ _ _ 10 resistance resistance NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1773 # text = The precise molecular abnormalities that cause primary cortisol resistance have not been completely described. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 precise precise ADJ JJ Degree=Pos _ _ _ _ 3 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 4 abnormalities abnormality NOUN NNS Number=Plur _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 cause cause VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 primary primary ADJ JJ Degree=Pos _ _ _ _ 8 cortisol cortisol NOUN NN Number=Sing _ _ _ _ 9 resistance resistance NOUN NN Number=Sing _ _ _ _ 10 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 13 completely completely ADV RB _ _ _ _ _ 14 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 1774 # text = In a subject with primary cortisol resistance we have observed glucocorticoid receptors (hGR) with a decreased affinity for dexamethasone. 1 In in ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 subject subject NOUN NN Number=Sing _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 primary primary ADJ JJ Degree=Pos _ _ _ _ 6 cortisol cortisol NOUN NN Number=Sing _ _ _ _ 7 resistance resistance NOUN NN Number=Sing _ _ _ _ 8 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 9 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 12 receptors receptor NOUN NNS Number=Plur _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 hGR hGR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 affinity affinity NOUN NN Number=Sing _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1775 # text = We hypothesize that a mutation of the hGR glucocorticoid-binding domain is the cause of cortisol resistance. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 hypothesize hypothesize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 mutation mutation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 hGR hGR PROPN NNP Number=Sing _ _ _ _ 9 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 domain domain NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 cause cause NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 cortisol cortisol NOUN NN Number=Sing _ _ _ _ 18 resistance resistance NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1776 # text = Total RNA isolated from the index subject's mononuclear leukocytes was used to produce first strand hGR cDNAs, and the entire hGR cDNA was amplified in segments and sequenced. 1 Total total PROPN NNP Number=Sing _ _ _ _ 2 RNA RNa PROPN NNP Number=Sing _ _ _ _ 3 isolated isolate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 index index NOUN NN Number=Sing _ _ _ _ 7 subject subject NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 's 's PART POS _ _ _ _ _ 9 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 10 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 produce produce VERB VB VerbForm=Inf _ _ _ _ 15 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 16 strand strand NOUN NN Number=Sing _ _ _ _ 17 hGR hgr ADP IN _ _ _ _ _ 18 cDNAs cDNA NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 entire entire ADJ JJ Degree=Pos _ _ _ _ 23 hGR hgr NOUN NN Number=Sing _ _ _ _ 24 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 25 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 26 amplified amplify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 segments segment NOUN NNS Number=Plur _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 sequenced sequence VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1777 # text = At nucleotide 2,317 we identified a homozygous A for G point mutation that predicts an isoleucine (ATT) for valine (GTT) substitution at amino acid 729. 1 At at ADP IN _ _ _ _ _ 2 nucleotide nucleotide ADV RB _ _ _ _ _ 3 2,317 2,317 NUM CD NumType=Card _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 homozygous homozygous ADJ JJ Degree=Pos _ _ _ _ 8 A a NOUN NN Number=Sing _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 G G ADJ JJ Degree=Pos _ _ _ _ 11 point point NOUN NN Number=Sing _ _ _ _ 12 mutation mutation NOUN NN Number=Sing _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 predicts predict VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 isoleucine isoleucine NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 ATT ATT X ADD _ _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 valine valine NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 GTT GTT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 substitution substitution NOUN NN Number=Sing _ _ _ _ 26 at at ADP IN _ _ _ _ _ 27 amino amino DET DT _ _ _ _ _ 28 acid acid NOUN NN Number=Sing _ _ _ _ 29 729 729 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1778 # text = When the wild-type hGR and hGR-Ile 729 were expressed in COS-1 cells and assayed for [3H]-Dexamethasone binding, the dissociation constants were 0.799 +/- 0.068 and 1.54 +/- 0.06 nM 1 When when ADV WRB PronType=Int _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 type type NOUN NN Number=Sing _ _ _ _ 6 hGR hgr NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 hGR- hGR- SYM NFP _ _ _ _ SpaceAfter=No 9 Ile Ile PROPN NNP Number=Sing _ _ _ _ 10 729 729 NUM CD NumType=Card _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 COS COS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 assayed assay VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 H h NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 Dexamethasone Dexamethasone PROPN NNP Number=Sing _ _ _ _ 27 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 dissociation dissociation NOUN NN Number=Sing _ _ _ _ 31 constants constant NOUN NNS Number=Plur _ _ _ _ 32 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 33 0.799 0.799 NUM CD NumType=Card _ _ _ _ 34 +/- +/- SYM SYM _ _ _ _ _ 35 0.068 0.068 NUM CD NumType=Card _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 1.54 1.54 NUM CD NumType=Card _ _ _ _ 38 +/- +/- SYM SYM _ _ _ _ _ 39 0.06 0.06 NUM CD NumType=Card _ _ _ _ 40 nM nm NOUN NN Number=Sing _ _ _ _ # sent_id = 1779 # text = (mean +/- SEM) (P < 0.01), respectively. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 mean mean X GW _ _ _ _ _ 3 +/- +/- X GW _ _ _ _ _ 4 SEM SEm NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 P p NOUN NN Number=Sing _ _ _ _ 8 < < PUNCT -LRB- _ _ _ _ _ 9 0.01 0.01 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 1780 # text = When the wild-type hGR and hGR-Ile 729 were expressed in CV-1 cells that were cotransfected with the mouse mammary tumor virus long terminal repeat fused to the chloramphenicol acetyl transferase (CAT) gene, the hGR-Ile 729 conferred a fourfold decrease in apparent potency on dexamethasone stimulation of CAT activity. 1 When when ADV WRB PronType=Int _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 type type NOUN NN Number=Sing _ _ _ _ 6 hGR hgr NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 hGR- hGR- SYM NFP _ _ _ _ SpaceAfter=No 9 Ile Ile PROPN NNP Number=Sing _ _ _ _ 10 729 729 NUM CD NumType=Card _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 CV CV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 cotransfected cotransfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 mouse mouse NOUN NN Number=Sing _ _ _ _ 24 mammary mammary NOUN NN Number=Sing _ _ _ _ 25 tumor tumor NOUN NN Number=Sing _ _ _ _ 26 virus virus NOUN NN Number=Sing _ _ _ _ 27 long long ADV RB Degree=Pos _ _ _ _ 28 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 29 repeat repeat NOUN NN Number=Sing _ _ _ _ 30 fused fuse VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 34 acetyl acetyl NOUN NN Number=Sing _ _ _ _ 35 transferase transferase NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 CAT cat NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 hGR- hGR- X AFX _ _ _ _ SpaceAfter=No 43 Ile Ile PROPN NNP Number=Sing _ _ _ _ 44 729 729 NUM CD NumType=Card _ _ _ _ 45 conferred confer VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 46 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 47 fourfold fourfold ADJ JJ Degree=Pos _ _ _ _ 48 decrease decrease NOUN NN Number=Sing _ _ _ _ 49 in in ADP IN _ _ _ _ _ 50 apparent apparent ADJ JJ Degree=Pos _ _ _ _ 51 potency potency NOUN NN Number=Sing _ _ _ _ 52 on on ADP IN _ _ _ _ _ 53 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 54 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 55 of of ADP IN _ _ _ _ _ 56 CAT Cat ADJ JJ Degree=Pos _ _ _ _ 57 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 1781 # text = The isoleucine for valine substitution at amino acid 729 impairs the function of the hGR and is the likely cause of primary cortisol resistance in this subject. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 isoleucine isoleucine NOUN NN Number=Sing _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 valine valine NOUN NN Number=Sing _ _ _ _ 5 substitution substitution NOUN NN Number=Sing _ _ _ _ 6 at at ADP IN _ _ _ _ _ 7 amino amino DET DT _ _ _ _ _ 8 acid acid ADJ JJ Degree=Pos _ _ _ _ 9 729 729 NUM CD NumType=Card _ _ _ _ 10 impairs impair NOUN NNS Number=Plur _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 function function NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 hGR hgr PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 likely likely ADJ JJ Degree=Pos _ _ _ _ 20 cause cause NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 primary primary ADJ JJ Degree=Pos _ _ _ _ 23 cortisol cortisol NOUN NN Number=Sing _ _ _ _ 24 resistance resistance NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 27 subject subject NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1782 # text = Document 00300340 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300340 00300340 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1783 # text = Expression and role of PML gene in normal adult hematopoiesis: functional interaction between PML and Rb proteins in erythropoiesis. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 role role NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 PML pMl ADJ JJ Degree=Pos _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 normal normal ADJ JJ Degree=Pos _ _ _ _ 9 adult adult NOUN NN Number=Sing _ _ _ _ 10 hematopoiesis hematopoiesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 : : PUNCT : _ _ _ _ _ 12 functional functional ADJ JJ Degree=Pos _ _ _ _ 13 interaction interaction NOUN NN Number=Sing _ _ _ _ 14 between between ADP IN _ _ _ _ _ 15 PML PML PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 Rb Rb PROPN NNP Number=Sing _ _ _ _ 18 proteins protein VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 erythropoiesis erythropoiesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1784 # text = The expression of the PML gene was investigated in purified early hematopoietic progenitor cells (HPCs) induced to unilineage erythroid or granulocytic differentiation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 PML PML PROPN NNP Number=Sing _ _ _ _ 6 gene gene PROPN NNP Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 early early ADV RB Degree=Pos _ _ _ _ 12 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 13 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 HPCs HPC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 unilineage unilineage NOUN NN Number=Sing _ _ _ _ 21 erythroid erythroid NOUN NN Number=Sing _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 24 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1785 # text = PML mRNA and protein, while barely detectable in quiescent HPCs, are consistently induced by growth factor stimulation through the erythroid or granulocytic lineage. 1 PML PML PROPN NNP Number=Sing _ _ _ _ 2 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 while while SCONJ IN _ _ _ _ _ 7 barely barely ADV RB _ _ _ _ _ 8 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 quiescent quiescent ADJ JJ Degree=Pos _ _ _ _ 11 HPCs HPC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 consistently consistently ADV RB _ _ _ _ _ 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 growth growth NOUN NN Number=Sing _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 20 through through ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 25 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1786 # text = Thereafter, PML is downmodulated in late granulocytic maturation, whereas it is sustainably expressed through the erythroid pathway. 1 Thereafter thereafter ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 PML PML PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 downmodulated downmodulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 late late ADJ JJ Degree=Pos _ _ _ _ 8 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 9 maturation maturation NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 whereas whereas SCONJ IN _ _ _ _ _ 12 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 sustainably sustainably ADV RB _ _ _ _ _ 15 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 through through ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 19 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1787 # text = In functional studies, PML expression was inhibited by addition of antisense oligomers targeting PML mRNA (alpha-PML). 1 In in ADP IN _ _ _ _ _ 2 functional functional ADJ JJ Degree=Pos _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 PML PML ADJ JJ Degree=Pos _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 addition addition NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 antisense antisense ADJ JJ Degree=Pos _ _ _ _ 13 oligomers oligomer NOUN NNS Number=Plur _ _ _ _ 14 targeting target VERB VBG VerbForm=Ger _ _ _ _ 15 PML PML PROPN NNP Number=Sing _ _ _ _ 16 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 PML pMl NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1788 # text = Interestingly, early treatment (day 0 HPCs) with alpha-PML reduced the number of both erythroid and granulocytic colonies, whereas late treatment (day 5 culture) reduced erythroid, but not granulocytic, clonogenesis. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 early early ADJ JJ Degree=Pos _ _ _ _ 4 treatment treatment NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 day day NOUN NN Number=Sing _ _ _ _ 7 0 0 NUM CD NumType=Card _ _ _ _ 8 HPCs HPC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 PML PML PROPN NNP Number=Sing _ _ _ _ 14 reduced reduce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 number number NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 both both CCONJ CC _ _ _ _ _ 19 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 22 colonies colony NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 whereas whereas SCONJ IN _ _ _ _ _ 25 late late ADJ JJ Degree=Pos _ _ _ _ 26 treatment treatment NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 day day NOUN NN Number=Sing _ _ _ _ 29 5 5 NUM CD NumType=Card _ _ _ _ 30 culture culture NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 erythroid erythroid NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 but but CCONJ CC _ _ _ _ _ 36 not not ADV RB _ _ _ _ _ 37 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 clonogenesis clonogenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1789 # text = These findings suggest that PML is required for early hematopoiesis and erythroid, but not granulocytic maturation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 PML PML PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 early early ADJ JJ Degree=Pos _ _ _ _ 10 hematopoiesis hematopoiesis NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 not not ADV RB _ _ _ _ _ 16 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 17 maturation maturation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1790 # text = The pattern of PML expression in normal hematopoiesis mimics that of retinoblastoma pRb 105. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 pattern pattern NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 PML pMl NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 normal normal ADJ JJ Degree=Pos _ _ _ _ 8 hematopoiesis hematopoiesis NOUN NN Number=Sing _ _ _ _ 9 mimics mimics NOUN NNS Number=Plur _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 retinoblastoma retinoblastoma NOUN NN Number=Sing _ _ _ _ 13 pRb pRb NOUN NN Number=Sing _ _ _ _ 14 105 105 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 1791 # text = Combined treatment of HPCs with alpha-PML and alpha-Rb oligomers inhibited both PML and Rb protein expression and completely blocked erythroid colony development. 1 Combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 treatment treatment NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 HPCs HPC PROPN NNPS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 PML PML PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 Rb Rb PROPN NNP Number=Sing _ _ _ _ 13 oligomers oligomer NOUN NNS Number=Plur _ _ _ _ 14 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 both both CCONJ CC _ _ _ _ _ 16 PML PML PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 Rb Rb PROPN NNP Number=Sing _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 completely completely ADV RB _ _ _ _ _ 23 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 25 colony colony NOUN NN Number=Sing _ _ _ _ 26 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1792 # text = Furthermore, PML and pRb 105 were co-immunoprecipitated in cellular lysates derived from erythroid precursors indicating that this functional interaction may have a biochemical basis. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 PML PML PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 pRb pRb PROPN NNP Number=Sing _ _ _ _ 6 105 105 NUM CD NumType=Card _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 co-immunoprecipitated co-immunoprecipitate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 11 lysates lysate NOUN NNS Number=Plur _ _ _ _ 12 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 15 precursors precursor NOUN NNS Number=Plur _ _ _ _ 16 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 19 functional functional ADJ JJ Degree=Pos _ _ _ _ 20 interaction interaction NOUN NN Number=Sing _ _ _ _ 21 may may AUX MD VerbForm=Fin _ _ _ _ 22 have have VERB VB VerbForm=Inf _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 25 basis basis NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1793 # text = These results suggest a key functional role of PML in early hematopoiesis and late erythropoiesis: the latter phenomenon may be related to the molecular and functional interaction of PML with pRb 105. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 key key ADJ JJ Degree=Pos _ _ _ _ 6 functional functional ADJ JJ Degree=Pos _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 PML pMl NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 early early ADJ JJ Degree=Pos _ _ _ _ 12 hematopoiesis hematopoiesis NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 late late ADJ JJ Degree=Pos _ _ _ _ 15 erythropoiesis erythropoiesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 : : PUNCT : _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 latter latter ADJ JJ Degree=Pos _ _ _ _ 19 phenomenon phenomenon NOUN NN Number=Sing _ _ _ _ 20 may may AUX MD VerbForm=Fin _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 related related ADJ JJ Degree=Pos _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 functional functional ADJ JJ Degree=Pos _ _ _ _ 28 interaction interaction NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 PML pMl NOUN NN Number=Sing _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 pRb pRb NOUN NN Number=Sing _ _ _ _ 33 105 105 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1794 # text = Document 00300346 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300346 00300346 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1795 # text = Glucocorticoid receptors in anorexia nervosa and Cushing's disease. 1 Glucocorticoid Glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 2 receptors receptor NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 anorexia anorexia PROPN NNP Number=Sing _ _ _ _ 5 nervosa nervosa PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 Cushing Cushing PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 's 's PART POS _ _ _ _ _ 9 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1796 # text = BACKGROUND: Patients with anorexia nervosa do not display cushingoid features in spite of elevated cortisol plasma levels. 1 BACKGROUND background NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Patients patient NOUN NNS Number=Plur _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 anorexia anorexia NOUN NN Number=Sing _ _ _ _ 6 nervosa nervosa NOUN NN Number=Sing _ _ _ _ 7 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 display display VERB VB VerbForm=Inf _ _ _ _ 10 cushingoid cushingoid ADJ JJ Degree=Pos _ _ _ _ 11 features feature NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 spite spite NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 cortisol cortisol NOUN NN Number=Sing _ _ _ _ 17 plasma plasma NOUN NN Number=Sing _ _ _ _ 18 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1797 # text = Whether a cortisol resistance or a reduced availability of the metabolic substrates necessary to develop the effect of glucocorticoids is responsible for this has not been established. 1 Whether whether SCONJ IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 cortisol cortisol NOUN NN Number=Sing _ _ _ _ 4 resistance resistance NOUN NN Number=Sing _ _ _ _ 5 or or CCONJ CC _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 availability availability NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 metabolic metabolic NOUN NN Number=Sing _ _ _ _ 12 substrates substrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 develop develop VERB VB VerbForm=Inf _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 effect effect NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 24 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 not not PART RB _ _ _ _ _ 26 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 27 established establish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1798 # text = METHODS: Twenty-two patients with severe restrictive anorexia nervosa, 10 patients with active Cushing's disease, and 24 healthy volunteers without psychiatric disorders or mood alterations were investigated. 1 METHODS method NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Twenty twenty NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - SYM SYM _ _ _ _ SpaceAfter=No 5 two two NUM CD NumType=Card _ _ _ _ 6 patients patient NOUN NNS Number=Plur _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 severe severe ADJ JJ Degree=Pos _ _ _ _ 9 restrictive restrictive ADJ JJ Degree=Pos _ _ _ _ 10 anorexia anorexia NOUN NN Number=Sing _ _ _ _ 11 nervosa nervosa NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 10 10 NUM CD NumType=Card _ _ _ _ 14 patients patient NOUN NNS Number=Plur _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 active active ADJ JJ Degree=Pos _ _ _ _ 17 Cushing Cushing NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 's 's PART POS _ _ _ _ _ 19 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 24 24 NUM CD NumType=Card _ _ _ _ 23 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 24 volunteers volunteer NOUN NNS Number=Plur _ _ _ _ 25 without without ADP IN _ _ _ _ _ 26 psychiatric psychiatric ADJ JJ Degree=Pos _ _ _ _ 27 disorders disorder NOUN NNS Number=Plur _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 mood mood NOUN NN Number=Sing _ _ _ _ 30 alterations alteration NOUN NNS Number=Plur _ _ _ _ 31 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1799 # text = Glucocorticoid receptor characteristics were examined on mononuclear leukocytes by measuring [3H]dexamethasone binding and the effect of dexamethasone on [3H]thymidine incorporation, which represents an index of DNA synthesis. 1 Glucocorticoid Glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ _ 3 characteristics characteristic NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 8 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 9 by by SCONJ IN _ _ _ _ _ 10 measuring measure VERB VBG VerbForm=Ger _ _ _ _ 11 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 H] H] NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 15 binding binding VERB VBG VerbForm=Ger _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 effect effect NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 21 on on ADP IN _ _ _ _ _ 22 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 H h NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 thymidine thymidine NOUN NN Number=Sing _ _ _ _ 27 incorporation incorporation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 which which PRON WDT PronType=Rel _ _ _ _ 30 represents represent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 index index NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 DNA dna NOUN NN Number=Sing _ _ _ _ 35 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 1800 # text = RESULTS: The number of glucocorticoid receptors on mononuclear leukocytes (MNL) was comparable in patients with anorexia nervosa, patients with active Cushing's disease, and normal subjects (binding capacity 3.3 +/- 0.23 vs. 3.7 +/- 0.30 and 3.5 +/- 0.20 fmol/10(6) cells). 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 The the DET DT Definite=Def|PronType=Art _ _ _ _ 4 number number NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 7 receptors receptor NOUN NNS Number=Plur _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 10 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 MNL MNL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 comparable comparable ADJ JJ Degree=Pos _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 patients patient NOUN NNS Number=Plur _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 anorexia anorexia NOUN NN Number=Sing _ _ _ _ 20 nervosa nervosa NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 patients patient NOUN NNS Number=Plur _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 active active ADJ JJ Degree=Pos _ _ _ _ 25 Cushing Cushing NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 's 's PART POS _ _ _ _ _ 27 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 normal normal ADJ JJ Degree=Pos _ _ _ _ 31 subjects subject NOUN NNS Number=Plur _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 binding bind VERB VBG VerbForm=Ger _ _ _ _ 34 capacity capacity NOUN NN Number=Sing _ _ _ _ 35 3.3 3.3 NUM CD NumType=Card _ _ _ _ 36 +/- +/- SYM SYM _ _ _ _ _ 37 0.23 0.23 NUM CD NumType=Card _ _ _ _ 38 vs. vs. ADP IN _ _ _ _ _ 39 3.7 3.7 NUM CD NumType=Card _ _ _ _ 40 +/- +/- SYM SYM _ _ _ _ _ 41 0.30 0.30 NUM CD NumType=Card _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 3.5 3.5 NUM CD NumType=Card _ _ _ _ 44 +/- +/- SYM SYM _ _ _ _ _ 45 0.20 0.20 NUM CD NumType=Card _ _ _ _ 46 fmol/10 fmol/10 NUM CD NumType=Card _ _ _ SpaceAfter=No 47 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 48 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 49 ) ) PUNCT -RRB- _ _ _ _ _ 50 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 1801 # text = Conversely, glucocorticoid receptor affinity was significantly decreased in anorexia nervosa as well as in Cushing's patients compared to control subjects (dissociation constant 4.0 +/- 0.31 and 4.1 +/- 0.34 vs. 2.9 +/- 0.29 nmol/L, p < .001) and inversely correlated with the levels of urinary free cortisol in both groups of patients. 1 Conversely Conversely ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ _ 5 affinity affinity NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 significantly significantly ADV RB _ _ _ _ _ 8 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 anorexia anorexia NOUN NN Number=Sing _ _ _ _ 11 nervosa nervosa NOUN NN Number=Sing _ _ _ _ 12 as as ADV RB _ _ _ _ _ 13 well well ADV RB Degree=Pos _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 Cushing Cushing PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 's 's PART POS _ _ _ _ _ 18 patients patient NOUN NNS Number=Plur _ _ _ _ 19 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 control control VERB VB VerbForm=Inf _ _ _ _ 22 subjects subject NOUN NNS Number=Plur _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 dissociation dissociation NOUN NN Number=Sing _ _ _ _ 25 constant constant ADJ JJ Degree=Pos _ _ _ _ 26 4.0 4.0 NUM CD NumType=Card _ _ _ _ 27 +/- +/- SYM SYM _ _ _ _ _ 28 0.31 0.31 NUM CD NumType=Card _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 4.1 4.1 NUM CD NumType=Card _ _ _ _ 31 +/- +/- SYM SYM _ _ _ _ _ 32 0.34 0.34 NUM CD NumType=Card _ _ _ _ 33 vs. vs. ADP IN _ _ _ _ _ 34 2.9 2.9 NUM CD NumType=Card _ _ _ _ 35 +/- +/- SYM SYM _ _ _ _ _ 36 0.29 0.29 NUM CD NumType=Card _ _ _ _ 37 nmol/L nmol/l NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 p p NOUN NN Number=Sing _ _ _ _ 40 < < PUNCT -LRB- _ _ _ _ _ 41 .001 .001 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 inversely inversely ADV RB _ _ _ _ _ 45 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 with with ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 levels level NOUN NNS Number=Plur _ _ _ _ 49 of of ADP IN _ _ _ _ _ 50 urinary urinary ADJ JJ Degree=Pos _ _ _ _ 51 free free ADJ JJ Degree=Pos _ _ _ _ 52 cortisol cortisol NOUN NN Number=Sing _ _ _ _ 53 in in ADP IN _ _ _ _ _ 54 both both DET DT _ _ _ _ _ 55 groups group NOUN NNS Number=Plur _ _ _ _ 56 of of ADP IN _ _ _ _ _ 57 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 1802 # text = Basal [3H]thymidine incorporation in MNL was significantly reduced in anorexia nervosa as well as in Cushing's patients compared to control subjects (p < .001) and was diminished by dexamethasone to an extent similar to control subjects in patients with anorexia nervosa, but significantly (p < .001) less in those with Cushing's disease. 1 Basal Basal PROPN NNP Number=Sing _ _ _ _ 2 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 H h NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 6 thymidine thymidine NOUN NN Number=Sing _ _ _ _ 7 incorporation incorporation NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 MNL MNL PROPN NNP Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 significantly significantly ADV RB _ _ _ _ _ 12 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 anorexia anorexia NOUN NN Number=Sing _ _ _ _ 15 nervosa nervosa NOUN NN Number=Sing _ _ _ _ 16 as as ADV RB _ _ _ _ _ 17 well well ADV RB Degree=Pos _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 Cushing Cushing PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 's 's PART POS _ _ _ _ _ 22 patients patient NOUN NNS Number=Plur _ _ _ _ 23 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 control control VERB VB VerbForm=Inf _ _ _ _ 26 subjects subject NOUN NNS Number=Plur _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 p p NOUN NN Number=Sing _ _ _ _ 29 < < PUNCT -LRB- _ _ _ _ _ 30 .001 .001 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 34 diminished diminish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 extent extent NOUN NN Number=Sing _ _ _ _ 40 similar similar ADJ JJ Degree=Pos _ _ _ _ 41 to to PART TO _ _ _ _ _ 42 control control VERB VB VerbForm=Inf _ _ _ _ 43 subjects subject NOUN NNS Number=Plur _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 patients patient NOUN NNS Number=Plur _ _ _ _ 46 with with ADP IN _ _ _ _ _ 47 anorexia anorexia NOUN NN Number=Sing _ _ _ _ 48 nervosa nervosa NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 but but CCONJ CC _ _ _ _ _ 51 significantly significantly ADV RB _ _ _ _ _ 52 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 53 p p NOUN NN Number=Sing _ _ _ _ 54 < < PUNCT -LRB- _ _ _ _ _ 55 .001 .001 NUM CD NumType=Card _ _ _ SpaceAfter=No 56 ) ) PUNCT -RRB- _ _ _ _ _ 57 less less ADJ JJR Degree=Cmp _ _ _ _ 58 in in ADP IN _ _ _ _ _ 59 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 60 with with ADP IN _ _ _ _ _ 61 Cushing Cushing PROPN NNP Number=Sing _ _ _ SpaceAfter=No 62 's 's PART POS _ _ _ _ _ 63 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 64 . . PUNCT . _ _ _ _ _ # sent_id = 1803 # text = In patients with anorexia nervosa, the incorporation of [3H]thymidine into the MNL was inversely correlated with urinary free cortisol levels. 1 In in ADP IN _ _ _ _ _ 2 patients patient NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 anorexia anorexia NOUN NN Number=Sing _ _ _ _ 5 nervosa nervosa NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 incorporation incorporation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 3H] 3H] NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 thymidine thymidine NOUN NN Number=Sing _ _ _ _ 13 into into ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 MNL Mnl PROPN NNP Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 inversely inversely ADV RB _ _ _ _ _ 18 correlated correlate ADJ JJ Degree=Pos _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 urinary urinary ADJ JJ Degree=Pos _ _ _ _ 21 free free ADJ JJ Degree=Pos _ _ _ _ 22 cortisol cortisol NOUN NN Number=Sing _ _ _ _ 23 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1804 # text = CONCLUSIONS: 1 CONCLUSIONS conclusion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 1805 # text = These data indicate that the lack of cushingoid features in patients with anorexia nervosa is not ascribable to a reduced sensitivity to glucocorticoids but is more likely due to the paucity of metabolic substrates. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 lack lack NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 cushingoid cushingoid ADJ JJ Degree=Pos _ _ _ _ 9 features feature NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 patients patient NOUN NNS Number=Plur _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 anorexia anorexia NOUN NN Number=Sing _ _ _ _ 14 nervosa nervosa NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 ascribable ascribable ADJ JJ Degree=Pos _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 24 but but CCONJ CC _ _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 more more ADV RBR _ _ _ _ _ 27 likely likely ADJ JJ Degree=Pos _ _ _ _ 28 due due ADP IN _ _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 paucity paucity NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 metabolic metabolic ADJ JJ Degree=Pos _ _ _ _ 34 substrates substrate NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1806 # text = Document 00300349 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300349 00300349 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1807 # text = Genes that regulate interleukin-4 expression in T cells. 1 Genes gene NOUN NNS Number=Plur _ _ _ _ 2 that that PRON WDT PronType=Rel _ _ _ _ 3 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 4 4 NUM CD NumType=Card _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1808 # text = Interleukin-4 is an immunomodulatory cytokine which plays a central role in the regulation of allergic and atopic immune responses. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 immunomodulatory immunomodulatory ADJ JJ Degree=Pos _ _ _ _ 7 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 central central ADJ JJ Degree=Pos _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 regulation regulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 allergic allergic ADJ JJ Degree=Pos _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 atopic atopic ADJ JJ Degree=Pos _ _ _ _ 20 immune immune ADJ JJ Degree=Pos _ _ _ _ 21 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1809 # text = Significant progress has been made in gaining a detailed understanding of the transcriptional regulation of the interleukin-4 gene. 1 Significant significant ADJ JJ Degree=Pos _ _ _ _ 2 progress progress NOUN NN Number=Sing _ _ _ _ 3 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 made make VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in SCONJ IN _ _ _ _ _ 7 gaining gain VERB VBG VerbForm=Ger _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 detailed detailed ADJ JJ Degree=Pos _ _ _ _ 10 understanding understanding NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 14 regulation regulation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 4 4 NUM CD NumType=Card _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1810 # text = The recent identification and characterization of several key transcription factors has helped to elucidate the molecular mechanisms of T helper cell cytokine gene expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 recent recent ADJ JJ Degree=Pos _ _ _ _ 3 identification identification NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 characterization characterization NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 several several ADJ JJ Degree=Pos _ _ _ _ 8 key key ADJ JJ Degree=Pos _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ _ 11 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 helped help VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 elucidate elucidate VERB VB VerbForm=Inf _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 17 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 helper helper NOUN NN Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1811 # text = Document 00300354 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300354 00300354 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1812 # text = Extracellular signal-regulated protein kinase (ERK)-dependent and ERK-independent pathways target STAT3 on serine-727 in human neutrophils stimulated by chemotactic factors and cytokines. 1 Extracellular Extracelular ADJ JJ Degree=Pos _ _ _ _ 2 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 kinase kinase NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 ERK ERK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 ERK ERK ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 independent independent ADJ JJ Degree=Pos _ _ _ _ 16 pathways pathway NOUN NNS Number=Plur _ _ _ _ 17 target target NOUN NN Number=Sing _ _ _ _ 18 STAT3 STAT3 NOUN NN Number=Sing _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 727 727 NUM CD NumType=Card _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 26 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 chemotactic chemotactic ADJ JJ Degree=Pos _ _ _ _ 29 factors factor NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1813 # text = STAT3 (signal transducer and activator of transcription 3) is a latent transcription factor that is activated by tyrosine phosphorylation (Tyr-705) in cells stimulated with cytokines or growth factors. 1 STAT3 STAT3 NOUN NN Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 signal signal NOUN NN Number=Sing _ _ _ _ 4 transducer transducer NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 activator activator NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 latent latent ADJ JJ Degree=Pos _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 21 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 Tyr Tyr NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 705 705 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 32 or or CCONJ CC _ _ _ _ _ 33 growth growth NOUN NN Number=Sing _ _ _ _ 34 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1814 # text = Recent studies suggest that one or more cytoplasmic serine kinases also phosphorylate STAT3 and are necessary for maximal gene activation. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 one one NUM CD NumType=Card _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 more more ADJ JJR Degree=Cmp _ _ _ _ 8 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 9 serine serine NOUN NN Number=Sing _ _ _ _ 10 kinases kinase NOUN NNS Number=Plur _ _ _ _ 11 also also ADV RB _ _ _ _ _ 12 phosphorylate phosphorylate ADJ JJ Degree=Pos _ _ _ _ 13 STAT3 STAT3 NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1815 # text = Here we demonstrate, with a site-specific antibody, that STAT3 is phosphorylated on Ser-727 in human neutrophils stimulated with chemotactic factors (N-formyl-methionyl-leucyl-phenylalanine and complement C5a), cytokines [granulocyte/macrophage colony-stimulating factor (GM-CSF) and granulocyte colony-stimulating factor (G-CSF)], or a protein kinase C activator (PMA). 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 STAT3 STAT3 NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 Ser-727 Ser-727 NUM CD NumType=Card _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 21 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 chemotactic chemotactic ADJ JJ Degree=Pos _ _ _ _ 24 factors factor NOUN NNS Number=Plur _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 N-formyl-methionyl-leucyl-phenylalanine N-formyl-methionyl-leucyl-phenylalanine ADJ JJ Degree=Pos _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 complement complement ADJ JJ Degree=Pos _ _ _ _ 29 C5a C5a NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 33 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 / / PUNCT , _ _ _ _ SpaceAfter=No 36 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 37 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 40 factor factor NOUN NN Number=Sing _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 granulocyte granulocyte NOUN NN Number=Sing _ _ _ _ 48 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 51 factor factor NOUN NN Number=Sing _ _ _ _ 52 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 53 G- g- NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 CSF Csf NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 56 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 57 , , PUNCT , _ _ _ _ _ 58 or or CCONJ CC _ _ _ _ _ 59 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 60 protein protein NOUN NN Number=Sing _ _ _ _ 61 kinase kinase NOUN NN Number=Sing _ _ _ _ 62 C c NOUN NN Number=Sing _ _ _ _ 63 activator activator NOUN NN Number=Sing _ _ _ _ 64 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 65 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 66 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 67 . . PUNCT . _ _ _ _ _ # sent_id = 1816 # text = (2-Amino-3'-methoxyphenyl)oxanaphthalen-4-one (PD 98059), an inhibitor of extracellular signal-regulated protein kinase (ERK) activation, blocked the serine phosphorylation of STAT3 induced by chemotactic factors or PMA. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 Amino Amino NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ' ' NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 - - PUNCT : _ _ _ _ SpaceAfter=No 9 methoxyphenyl methoxyphenyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 oxanaphthalen oxanaphthal NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - SYM SYM _ _ _ _ SpaceAfter=No 15 one one NUM CD NumType=Card _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 PD P NOUN NN Number=Sing _ _ _ _ 18 98059 98059 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 25 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 protein protein NOUN NN Number=Sing _ _ _ _ 29 kinase kinase NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 ERK ERK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 serine serine NOUN NN Number=Sing _ _ _ _ 38 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 STAT3 STAT3 NUM CD NumType=Card _ _ _ _ 41 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 by by ADP IN _ _ _ _ _ 43 chemotactic chemotactic ADJ JJ Degree=Pos _ _ _ _ 44 factors factor NOUN NNS Number=Plur _ _ _ _ 45 or or CCONJ CC _ _ _ _ _ 46 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 1817 # text = The drug was less effective on cytokines: it virtually abolished the response to GM-CSF that occurred 5 min after stimulation but only partly decreased those at 15-30 min and did not appreciably alter responses to G-CSF regardless of incubation time. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 drug drug NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 less less ADV RBR Degree=Cmp _ _ _ _ 5 effective effective ADJ JJ Degree=Pos _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 : : PUNCT : _ _ _ _ _ 9 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 10 virtually virtually ADV RB _ _ _ _ _ 11 abolished abolish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 response response NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 CSF CSF PROPN NNP Number=Sing _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 5 5 NUM CD NumType=Card _ _ _ _ 21 min min NOUN NNS Number=Plur _ _ _ _ 22 after after ADP IN _ _ _ _ _ 23 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 24 but but CCONJ CC _ _ _ _ _ 25 only only ADV RB _ _ _ _ _ 26 partly partly ADV RB _ _ _ _ _ 27 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 29 at at ADP IN _ _ _ _ _ 30 15 15 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - SYM SYM _ _ _ _ SpaceAfter=No 32 30 30 NUM CD NumType=Card _ _ _ _ 33 min min NOUN NNS Number=Plur _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 not not PART RB _ _ _ _ _ 37 appreciably appreciably ADV RB _ _ _ _ _ 38 alter alter VERB VB VerbForm=Inf _ _ _ _ 39 responses response NOUN NNS Number=Plur _ _ _ _ 40 to to ADP IN _ _ _ _ _ 41 G- G- NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 CSF CSF PROPN NNP Number=Sing _ _ _ _ 43 regardless regardless ADV RB _ _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 incubation incubation NOUN NN Number=Sing _ _ _ _ 46 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 1818 # text = 1-(5-Isoquinolinylsulphonyl)-2-methylpiperazine dihydrochloride 1 1 1 X LS _ _ _ _ SpaceAfter=No 2 -( -( PUNCT . _ _ _ _ SpaceAfter=No 3 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 -Isoquinolinylsulphonyl -Isoquinolinylsulphonyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 6 - - PUNCT : _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 -methylpiperazine -methylpiperazine NOUN NN Number=Sing _ _ _ _ 9 dihydrochloride dihydrochloride NOUN NN Number=Sing _ _ _ _ # sent_id = 1819 # text = (H7), an inhibitor of a putative STAT3 serine kinase, and 4-(4-fluorophenyl)-2-(4-methylsulphinylphenyl)-5-(4-pyridyl) 1H-imidazole (SB 203580), an inhibitor of p38 mitogen-activated protein (MAP) kinase, did not dampen any of these serine phosphorylation responses. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 H7 H7 X LS _ _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 putative putative ADJ JJ Degree=Pos _ _ _ _ 10 STAT3 STAT3 NOUN NN Number=Sing _ _ _ _ 11 serine serine NOUN NN Number=Sing _ _ _ _ 12 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 -fluorophenyl -fluorophenyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 )- )- PUNCT . _ _ _ _ SpaceAfter=No 21 2-( 2-( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 4-methylsulphinylphenyl)- 4-methylsulphinylphenyl)- SYM NFP _ _ _ _ SpaceAfter=No 23 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 -( -( PUNCT . _ _ _ _ SpaceAfter=No 25 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 -pyridyl -pyridyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 1H 1h ADJ JJ Degree=Pos|NumType=Ord _ _ _ SpaceAfter=No 29 -imidazole -imidazole NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 SB Sb NOUN NN Number=Sing _ _ _ _ 32 203580 203580 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 p38 p38 NUM CD NumType=Card _ _ _ _ 39 mitogen mitogen NUM CD NumType=Card _ _ _ SpaceAfter=No 40 - - PUNCT : _ _ _ _ SpaceAfter=No 41 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 protein protein NOUN NN Number=Sing _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 MAP map PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ _ 46 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 49 not not PART RB _ _ _ _ _ 50 dampen dampen VERB VB VerbForm=Inf _ _ _ _ 51 any any DET DT _ _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 54 serine serine NOUN NN Number=Sing _ _ _ _ 55 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 56 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 1820 # text = We propose that neutrophils use both ERK-dependent and ERK-independent pathways to phosphorylate Ser-727 on STAT3. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 5 use use VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 both both CCONJ CC _ _ _ _ _ 7 ERK ERK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 ERK ERK ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 -independent -independent ADJ JJ Degree=Pos _ _ _ _ 13 pathways pathway NOUN NNS Number=Plur _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 phosphorylate phosphorylate VERB VB VerbForm=Inf _ _ _ _ 16 Ser-727 Ser-727 NUM CD NumType=Card _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 STAT3 STAT3 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1821 # text = The former pathway is recruited by all ERK-activating stimuli, whereas the latter pathway uses an undefined serine kinase and is recruited selectively by cytokines. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 former former ADJ JJ Degree=Pos _ _ _ _ 3 pathway pathway NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 recruited recruit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 all all DET DT _ _ _ _ _ 8 ERK- ERK- NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 activating activat VERB VBG VerbForm=Ger _ _ _ _ 10 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 whereas whereas SCONJ IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 latter latter ADJ JJ Degree=Pos _ _ _ _ 15 pathway pathway NOUN NN Number=Sing _ _ _ _ 16 uses use VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 undefined undefin ADJ JJ Degree=Pos _ _ _ _ 19 serine serine NOUN NN Number=Sing _ _ _ _ 20 kinase kinase NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 recruited recruit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 selectively selectively ADV RB _ _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1822 # text = Document 00300356 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300356 00300356 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1823 # text = Effects of IL-10 and IL-4 on LPS-induced transcription factors (AP-1, NF-IL6 and NF-kappa B) which are involved in IL-6 regulation. 1 Effects Effects PROPN NNPS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 10 10 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 4 4 NUM CD NumType=Card _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa PROPN NNP Number=Sing _ _ _ _ 28 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 which which PRON WDT PronType=Rel _ _ _ _ 31 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 32 involved involved ADJ JJ Degree=Pos _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 6 6 NUM CD NumType=Card _ _ _ _ 37 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1824 # text = Interleukin-10 (IL-10), like IL-4, is known to inhibit cytokine expression in activated human monocytes. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 like like ADP IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 19 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1825 # text = We showed that both IL-10 and IL-4 inhibit LPS-induced IL-6 mRNA and protein expression by inhibiting the transcription rate of the IL-6 gene. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 both both DET DT _ _ _ _ _ 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 10 10 NUM CD NumType=Card _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 4 4 NUM CD NumType=Card _ _ _ _ 12 inhibit inhibit NOUN NN Number=Sing _ _ _ _ 13 LPS Lps NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 6 6 NUM CD NumType=Card _ _ _ _ 19 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 by by SCONJ IN _ _ _ _ _ 24 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 rate rate NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 6 6 NUM CD NumType=Card _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1826 # text = The strong inhibition of the IL-6 transcription rate prompted us to study the effect of IL-10 and IL-4 on the expression of transcription factors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 strong strong ADJ JJ Degree=Pos _ _ _ _ 3 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 6 6 NUM CD NumType=Card _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 rate rate NOUN NN Number=Sing _ _ _ _ 11 prompted prompt VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 us we PRON PRP Case=Acc|Number=Plur|Person=1|PronType=Prs _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 study study VERB VB VerbForm=Inf _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 effect effect NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 10 10 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 4 4 NUM CD NumType=Card _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1827 # text = We questioned whether or not IL-10 and IL-4 affected the expression of transcription factors that are known to be involved in the control of the IL-6 transcription rate, namely activator protein-1 (AP-1), nuclear factor IL-6 (NF-IL6), and nuclear factor kappa B (NF-kappaB). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 questioned question VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 or or CCONJ CC _ _ _ _ _ 5 not not ADV RB _ _ _ _ _ 6 IL Il ADV RB _ _ _ _ SpaceAfter=No 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 10 10 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 4 4 NUM CD NumType=Card _ _ _ _ 13 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 factors factor NOUN NNS Number=Plur _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 be be AUX VB VerbForm=Inf _ _ _ _ 24 involved involved VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 control control NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 6 6 NUM CD NumType=Card _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 rate rate NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 namely namely ADV RB _ _ _ _ _ 37 activator activator NOUN NN Number=Sing _ _ _ _ 38 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 1 1 NUM CD NumType=Card _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 48 factor factor NOUN NN Number=Sing _ _ _ _ 49 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 6 6 NUM CD NumType=Card _ _ _ _ 52 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 53 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 IL6 Il6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 56 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 57 , , PUNCT , _ _ _ _ _ 58 and and CCONJ CC _ _ _ _ _ 59 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 60 factor factor NOUN NN Number=Sing _ _ _ _ 61 kappa kappa NOUN NN Number=Sing _ _ _ _ 62 B b PROPN NNP Number=Sing _ _ _ _ 63 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 64 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 65 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 66 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 67 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 68 . . PUNCT . _ _ _ _ _ # sent_id = 1828 # text = In electrophoretic mobility shift assays (EMSAs) we showed that IL-10 and IL-4 inhibited LPS-induced AP-1 binding activity. 1 In in ADP IN _ _ _ _ _ 2 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 3 mobility mobility NOUN NN Number=Sing _ _ _ _ 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assays assay NOUN NNS Number=Plur _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 EMSAs EMSAs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 10 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - SYM SYM _ _ _ _ SpaceAfter=No 14 10 10 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 4 4 NUM CD NumType=Card _ _ _ _ 19 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 binding binding VERB VBG VerbForm=Ger _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1829 # text = The inhibiting effect of IL-4 was slightly more pronounced than that of IL-10. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inhibiting inhibit NOUN NN Number=Sing _ _ _ _ 3 effect effect NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 4 4 NUM CD NumType=Card _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 slightly slightly ADV RB _ _ _ _ _ 10 more more ADV RBR _ _ _ _ _ 11 pronounced pronounced ADJ JJ Degree=Pos _ _ _ _ 12 than than ADP IN _ _ _ _ _ 13 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1830 # text = Downregulation of LPS-induced AP-1 was accompanied, and thus possibly explained, by a reduced expression at mRNA level of the two major components of the AP-1 complex, namely c-fos and c-jun as determined by Northern experiments. 1 Downregulation Downregulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 accompanied accompanied ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 thus thus ADV RB _ _ _ _ _ 14 possibly possibly ADV RB _ _ _ _ _ 15 explained explain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 at at ADP IN _ _ _ _ _ 22 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 23 level level NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 two two NUM CD NumType=Card _ _ _ _ 27 major major ADJ JJ Degree=Pos _ _ _ _ 28 components component NOUN NNS Number=Plur _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 namely namely ADV RB _ _ _ _ _ 37 c- c- SYM NFP _ _ _ _ SpaceAfter=No 38 fos fo NOUN NNS Number=Plur _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 c- c- SYM NFP _ _ _ _ SpaceAfter=No 41 jun jun NOUN NN Number=Sing _ _ _ _ 42 as as SCONJ IN _ _ _ _ _ 43 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 by by ADP IN _ _ _ _ _ 45 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 46 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 1831 # text = Binding activity of NF-IL6 was also strongly inhibited by IL-4 whereas IL-10 showed no effect. 1 Binding bind VERB VBG VerbForm=Ger _ _ _ _ 2 activity activity NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 also also ADV RB _ _ _ _ _ 9 strongly strongly ADV RB _ _ _ _ _ 10 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 4 4 NUM CD NumType=Card _ _ _ _ 15 whereas wherea NOUN NNS Number=Plur _ _ _ _ 16 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - SYM SYM _ _ _ _ SpaceAfter=No 18 10 10 NUM CD NumType=Card _ _ _ _ 19 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 no no DET DT _ _ _ _ _ 21 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1832 # text = NF-IL6 mRNA levels were not affected by IL-10 or IL-4, suggesting that IL-4 affects binding activity of preexisting NF-IL6. 1 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 IL6 IL6 PROPN NNP Number=Sing _ _ _ _ 4 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 5 levels level NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 10 10 NUM CD NumType=Card _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - SYM SYM _ _ _ _ SpaceAfter=No 22 4 4 NUM CD NumType=Card _ _ _ _ 23 affects affect NOUN NNS Number=Plur _ _ _ _ 24 binding bind VERB VBG VerbForm=Ger _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ _ 26 of of SCONJ IN _ _ _ _ _ 27 preexisting preexist VERB VBG VerbForm=Ger _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 IL6 Il6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1833 # text = Neither IL-10 nor IL-4 inhibited LPS-induced NF-kappa B binding activity. 1 Neither neither DET DT _ _ _ _ _ 2 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 10 10 NUM CD NumType=Card _ _ _ _ 5 nor nor NOUN NN Number=Sing _ _ _ _ 6 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 4 4 NUM CD NumType=Card _ _ _ _ 9 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 LPS Lps NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 binding binde VERB VBG VerbForm=Ger _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1834 # text = In agreement with this finding, Northern experiments where p65 and p105 mRNA levels were determined, demonstrated that expression of these components of the NF-kappa B transcription factor were not affected by IL-10 or IL-4. 1 In in ADP IN _ _ _ _ _ 2 agreement agreement NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 finding finding NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 8 experiments experiment NOUN NNS Number=Plur _ _ _ _ 9 where where ADV WRB PronType=Rel _ _ _ _ 10 p65 p65 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 p105 p105 NUM CD NumType=Card _ _ _ _ 13 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 14 levels level NOUN NNS Number=Plur _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 23 components component NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa PROPN NNP Number=Sing _ _ _ _ 29 B b PROPN NNP Number=Sing _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ _ 31 factor factor NOUN NN Number=Sing _ _ _ _ 32 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 33 not not PART RB _ _ _ _ _ 34 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT , _ _ _ _ SpaceAfter=No 38 10 10 NUM CD NumType=Card _ _ _ _ 39 or or CCONJ CC _ _ _ _ _ 40 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 1835 # text = Furthermore, neither IL-10 nor IL-4 showed any effect on 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 neither neither DET DT _ _ _ _ _ 4 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 10 10 NUM CD NumType=Card _ _ _ _ 7 nor nor NOUN NN Number=Sing _ _ _ _ 8 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 4 4 NUM CD NumType=Card _ _ _ _ 11 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 any any DET DT _ _ _ _ _ 13 effect effect NOUN NN Number=Sing _ _ _ _ 14 on on ADP IN _ _ _ _ _ # sent_id = 1836 # text = I-kappa B mRNA expression as determined by Northern experiments. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 2 - - PUNCT NFP _ _ _ _ SpaceAfter=No 3 kappa kappa X GW _ _ _ _ _ 4 B b X GW _ _ _ _ _ 5 mRNA mRNa X GW _ _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 as as SCONJ IN _ _ _ _ _ 8 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 11 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 1837 # text = Thus, IL-10 and IL-4 similarly affect IL-6 expression. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - SYM SYM _ _ _ _ SpaceAfter=No 5 10 10 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 4 4 NUM CD NumType=Card _ _ _ _ 10 similarly similarly ADJ JJ Degree=Pos _ _ _ _ 11 affect affect NOUN NN Number=Sing _ _ _ _ 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT : _ _ _ _ SpaceAfter=No 14 6 6 NUM CD NumType=Card _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 1838 # text = However, for IL-4 this was accompanied with a reduction of AP-1 and NF-IL6 binding activity whereas IL-10 only inhibited AP-1 binding activity. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 4 4 NUM CD NumType=Card _ _ _ _ 7 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 reduction reduction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 IL6 IL6 PROPN NNP Number=Sing _ _ _ _ 21 binding bind VERB VBG VerbForm=Ger _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 whereas whereas NOUN NNS Number=Plur _ _ _ _ 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - SYM SYM _ _ _ _ SpaceAfter=No 26 10 10 NUM CD NumType=Card _ _ _ _ 27 only only ADV RB _ _ _ _ _ 28 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 binding binding VERB VBG VerbForm=Ger _ _ _ _ 33 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1839 # text = Document 00300363 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300363 00300363 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1840 # text = Thyroid hormone receptors form distinct nuclear protein-dependent and independent complexes with a thyroid hormone response element. 1 Thyroid thyroid ADJ JJ Degree=Pos _ _ _ _ 2 hormone hormone NOUN NN Number=Sing _ _ _ _ 3 receptors receptor NOUN NNS Number=Plur _ _ _ _ 4 form form ADP IN Typo=Yes _ _ _ _ 5 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 8 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 independent independent ADJ JJ Degree=Pos _ _ _ _ 11 complexes complexe NOUN NNS Number=Plur _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 thyroid thyroid NOUN NN Number=Sing _ _ _ _ 15 hormone hormone NOUN NN Number=Sing _ _ _ _ 16 response response NOUN NN Number=Sing _ _ _ _ 17 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1841 # text = We have examined the binding of nuclear proteins and recombinant thyroid hormone receptors (TRs) to the palindromic thyroid hormone responsive element AGGTCATGACCT (TREp) using a gel electrophoretic mobility shift assay. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 binding binding NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 proteins protein NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 11 thyroid thyroid NOUN NN Number=Sing _ _ _ _ 12 hormone hormone NOUN NN Number=Sing _ _ _ _ 13 receptors receptor NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 TRs TRs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 palindromic palindromic ADJ JJ Degree=Pos _ _ _ _ 20 thyroid thyroid NOUN NN Number=Sing _ _ _ _ 21 hormone hormone NOUN NN Number=Sing _ _ _ _ 22 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 23 element element NOUN NN Number=Sing _ _ _ _ 24 AGGTCATGACCT AGGTCATGACCT PROPN NNP Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 TREp TREp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 using use VERB VBG VerbForm=Ger _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 gel gel NOUN NN Number=Sing _ _ _ _ 31 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 32 mobility mobility NOUN NN Number=Sing _ _ _ _ 33 shift shift NOUN NN Number=Sing _ _ _ _ 34 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1842 # text = Four specific protein-DNA complexes were detected after incubation of nuclear extracts (NE) from T3-responsive pituitary (GH3) cells with a TREp-containing DNA fragment. 1 Four four NUM CD NumType=Card _ _ _ _ 2 specific specific ADJ JJ Degree=Pos _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 DNA dna NOUN NN Number=Sing _ _ _ _ 6 complexes complex NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 after after ADP IN _ _ _ _ _ 10 incubation incubation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 extracts extract NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 NE NE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 T3 T3 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 21 pituitary pituitary NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 GH3 GH3 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 TREp TREp NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 containing contain VERB VBG VerbForm=Ger _ _ _ _ 31 DNA dna NOUN NN Number=Sing _ _ _ _ 32 fragment fragment NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1843 # text = This was compared with the TREp binding of reticulocyte lysate-synthesized TRs. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 compared compare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 TREp TREp NOUN NN Number=Sing _ _ _ _ 7 binding binding VERB VBG VerbForm=Ger _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 reticulocyte reticulocyte NOUN NN Number=Sing _ _ _ _ 10 lysate lysate NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 synthesized synthesize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 TRs TR NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 1844 # text = TR alpha 1 and TR beta 2 each formed a single major TR:TREp complex which comigrated with the least retarded complex formed by GH3 NE, while TR beta 1 formed multiple complexes suggesting that it can bind to TREp as an oligomer. 1 TR Tr VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 alpha alpha ADV RB _ _ _ _ _ 3 1 1 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 TR Tr ADJ JJR Degree=Cmp _ _ _ _ 6 beta beta NOUN NN Number=Sing _ _ _ _ 7 2 2 NUM CD NumType=Card _ _ _ _ 8 each each DET DT _ _ _ _ _ 9 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 single single ADJ JJ Degree=Pos _ _ _ _ 12 major major ADJ JJ Degree=Pos _ _ _ _ 13 TR: Tr: NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 TREp TREp NOUN NN Number=Sing _ _ _ _ 15 complex complex NOUN NN Number=Sing _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 comigrated comigrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 least least ADJ JJS Degree=Sup _ _ _ _ 21 retarded retard ADJ JJ Degree=Pos _ _ _ _ 22 complex complex NOUN NN Number=Sing _ _ _ _ 23 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 GH3 GH3 NOUN NN Number=Sing _ _ _ _ 26 NE Ne PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 while while SCONJ IN _ _ _ _ _ 29 TR TR PROPN NNP Number=Sing _ _ _ _ 30 beta beta PROPN NNP Number=Sing _ _ _ _ 31 1 1 NUM CD NumType=Card _ _ _ _ 32 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 34 complexes complex NOUN NNS Number=Plur _ _ _ _ 35 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 36 that that SCONJ IN _ _ _ _ _ 37 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 38 can can AUX MD VerbForm=Fin _ _ _ _ 39 bind bind VERB VB VerbForm=Inf _ _ _ _ 40 to to PART TO _ _ _ _ _ 41 TREp TREp VERB VB VerbForm=Inf _ _ _ _ 42 as as ADP IN _ _ _ _ _ 43 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 44 oligomer oligomer NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 1845 # text = Interestingly, coincubation of 35S-TR alpha 1, GH3 NE, and unlabeled TREp resulted in not only the 35S-TR:TREp complex, but in two additional more greatly retarded complexes containing 35S-TR alpha 1 and comigrating with those formed by GH3 extract alone. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 coincubation coincubation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 35S 35S PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 TR TR PROPN NNP Number=Sing _ _ _ _ 8 alpha alpha NOUN NN Number=Sing _ _ _ _ 9 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 GH3 GH3 NUM CD NumType=Card _ _ _ _ 12 NE NE NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 unlabeled unlabel ADJ JJ Degree=Pos _ _ _ _ 16 TREp TREp PROPN NNP Number=Sing _ _ _ _ 17 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 not not ADV RB _ _ _ _ _ 20 only only ADV RB _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 35S 35S NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 TR:TREp TR:TREp NOUN NN Number=Sing _ _ _ _ 25 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 but but CCONJ CC _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 two two NUM CD NumType=Card _ _ _ _ 30 additional additional ADJ JJ Degree=Pos _ _ _ _ 31 more more ADV RBR _ _ _ _ _ 32 greatly greatly ADV RB _ _ _ _ _ 33 retarded retarded VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 complexes complexe NOUN NNS Number=Plur _ _ _ _ 35 containing contain VERB VBG VerbForm=Ger _ _ _ _ 36 35S 35S PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 TR TR PROPN NNP Number=Sing _ _ _ _ 39 alpha alpha ADP IN _ _ _ _ _ 40 1 1 NUM CD NumType=Card _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 comigrating comigrat VERB VBG VerbForm=Ger _ _ _ _ 43 with with ADP IN _ _ _ _ _ 44 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 45 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 by by ADP IN _ _ _ _ _ 47 GH3 GH3 NUM CD NumType=Card _ _ _ _ 48 extract extract NOUN NN Number=Sing _ _ _ _ 49 alone alone ADV RB _ _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 1846 # text = Incubation of each of the TRs with NE from COS-7 cells, which do not possess sufficient endogenous TRs to mediate T3-responses, resulted in formation of a new, more greatly shifted complex. 1 Incubation incubation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 each each DET DT _ _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 TRs TRs PROPN NNPS Number=Plur _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 NE NE PROPN NNP Number=Sing _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 COS COS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 7 7 NUM CD NumType=Card _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 not not PART RB _ _ _ _ _ 18 possess possess VERB VB VerbForm=Inf _ _ _ _ 19 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 20 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 21 TRs TR NOUN NNS Number=Plur _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 24 T3 T3 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 formation formation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 new new ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 more more ADV RBR _ _ _ _ _ 36 greatly greatly ADV RB _ _ _ _ _ 37 shifted shifte VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 1847 # text = A similar, heat labile activity which altered mobility of the TR:TRE complex was also present in NE from T3-unresponsive JEG-3 cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 similar similar ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 heat heat NOUN NN Number=Sing _ _ _ _ 5 labile labile ADJ JJ Degree=Pos _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 altered alter VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 mobility mobility NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 TR: Tr: NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 TRE Tre NOUN NN Number=Sing _ _ _ _ 14 complex complex NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 also also ADV RB _ _ _ _ _ 17 present present ADJ JJ Degree=Pos _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 NE NE PROPN NNP Number=Sing _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 T3 T3 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 unresponsive unresponsive ADJ JJ Degree=Pos _ _ _ _ 24 JEG JEG NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 3 3 NUM CD NumType=Card _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1848 # text = At high concentration of NE, all of the TR bound to TREp was more greatly retarded than in the absence of NE. 1 At at ADP IN _ _ _ _ _ 2 high high ADJ JJ Degree=Pos _ _ _ _ 3 concentration concentration NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NE Ne PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 all all DET DT _ _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 TR TR PROPN NNP Number=Sing _ _ _ _ 11 bound bound ADJ JJ Degree=Pos _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 TREp TREp PROPN NNP Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 more more ADV RBR _ _ _ _ _ 16 greatly greatly ADV RB _ _ _ _ _ 17 retarded retard VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 than than ADP IN _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 absence absence NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 NE NE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1849 # text = Truncation of TR alpha 1 at amino acid 210 prevented additional complex formation in the presence of NE without affecting DNA binding, suggesting that the carboxyl-terminus of the TRs is essential for interaction with nuclear proteins. 1 Truncation Truncation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 TR TR PROPN NNP Number=Sing _ _ _ _ 4 alpha alpha NOUN NN Number=Sing _ _ _ _ 5 1 1 NUM CD NumType=Card _ _ _ _ 6 at at ADP IN _ _ _ _ _ 7 amino amino DET DT _ _ _ _ _ 8 acid acid ADJ JJ Degree=Pos _ _ _ _ 9 210 210 NUM CD NumType=Card _ _ _ _ 10 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 additional additional ADJ JJ Degree=Pos _ _ _ _ 12 complex complex NOUN NN Number=Sing _ _ _ _ 13 formation formation NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 presence presence NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NE NE PROPN NNP Number=Sing _ _ _ _ 19 without without SCONJ IN _ _ _ _ _ 20 affecting affect VERB VBG VerbForm=Ger _ _ _ _ 21 DNA dna NOUN NN Number=Sing _ _ _ _ 22 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 carboxyl carboxyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 terminus terminus NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 TRs TRs NOUN NNS Number=Plur _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 essential essential ADJ JJ Degree=Pos _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 interaction interaction NOUN NN Number=Sing _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 39 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1850 # text = (ABSTRACT TRUNCATED AT 250 WORDS) 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 ABSTRACT ABSTRACT X GW _ _ _ _ _ 3 TRUNCATED Truncate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 AT at ADV RB _ _ _ _ _ 5 250 250 NUM CD NumType=Card _ _ _ _ 6 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1851 # text = Document 00300368 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300368 00300368 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1852 # text = Megakaryocytic and erythrocytic lineages share specific transcription factors. 1 Megakaryocytic Megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 erythrocytic erythrocytic ADJ JJ Degree=Pos _ _ _ _ 4 lineages lineage NOUN NNS Number=Plur _ _ _ _ 5 share share VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 specific specific ADJ JJ Degree=Pos _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1853 # text = Erythroid-specific genes contain binding sites for NF-E1 (also called GF-1 and Eryf-1; refs 1-3 respectively), the principal DNA-binding protein of the erythrocytic lineage. 1 Erythroid Erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 specific specific ADJ JJ Degree=Pos _ _ _ _ 4 genes gene NOUN NNS Number=Plur _ _ _ _ 5 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 sites site NOUN NNS Number=Plur _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 E1 E1 PROPN NNP Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 also also ADV RB _ _ _ _ _ 14 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 GF gf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 Eryf Eryf NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ; ; PUNCT , _ _ _ _ _ 23 refs ref NOUN NNS Number=Plur _ _ _ _ 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - SYM SYM _ _ _ _ SpaceAfter=No 26 3 3 NUM CD NumType=Card _ _ _ _ 27 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 principal principal ADJ JJ Degree=Pos _ _ _ _ 32 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 binding binding VERB VBG VerbForm=Ger _ _ _ _ 35 protein protein NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 erythrocytic erythrocytic ADJ JJ Degree=Pos _ _ _ _ 39 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1854 # text = NF-E1 expression seems to be restricted to the erythrocytic lineage. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 E1 E1 PROPN NNP Number=Sing _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 restricted restrict VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 erythrocytic erythrocytic ADJ JJ Degree=Pos _ _ _ _ 12 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 1855 # text = A closely related (if not identical) protein is found in both a human megakaryocytic cell line and purified human megakaryocytes; it binds to promoter regions of two megakaryocytic-specific genes. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 closely closely ADV RB _ _ _ _ _ 3 related related ADJ JJ Degree=Pos _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 if if SCONJ IN _ _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 identical identical ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 both both DET DT _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 line line NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 purified purify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 megakaryocytes megakaryocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 ; ; PUNCT , _ _ _ _ _ 24 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 25 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 promoter promoter VERB VB VerbForm=Inf _ _ _ _ 28 regions region NOUN NNS Number=Plur _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 two two NUM CD NumType=Card _ _ _ _ 31 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 specific specific ADJ JJ Degree=Pos _ _ _ _ 34 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1856 # text = The binding sites and partial proteolysis profile of this protein are indistinguishable from those of the erythroid protein; also, NF-E1 messenger RNA is the same size in both the megakaryocytic and erythroid cell lines. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 binding binding VERB VBG VerbForm=Ger _ _ _ _ 3 sites site NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 partial partial ADJ JJ Degree=Pos _ _ _ _ 6 proteolysis proteolysis NOUN NN Number=Sing _ _ _ _ 7 profile profile NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 indistinguishable indistinguishable ADJ JJ Degree=Pos _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ; ; PUNCT , _ _ _ _ _ 20 also also ADV RB _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 E1 E1 PROPN NNP Number=Sing _ _ _ _ 25 messenger messenger NOUN NN Number=Sing _ _ _ _ 26 RNA RNA PROPN NNP Number=Sing _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 same same ADJ JJ Degree=Pos _ _ _ _ 30 size size NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 both both CCONJ CC _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 1857 # text = Furthermore, point mutations that abolish binding of NF-E1 result in a 70% decrease in the transcriptional activity of a megakaryocytic-specific promoter. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 point point VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 mutations mutation NOUN NNS Number=Plur _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 abolish abolish VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 binding binding VERB VBG VerbForm=Ger _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 E1 e1 PROPN NNP Number=Sing _ _ _ _ 12 result result NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 70 70 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 % % SYM NN Number=Sing _ _ _ _ 17 decrease decrease NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 specific specific ADJ JJ Degree=Pos _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1858 # text = We also find that NF-E2, another trans-acting factor of the erythrocytic lineage, is present in megakaryocytes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 find find VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 E2 e2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 another another DET DT _ _ _ _ _ 10 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 acting act VERB VBG VerbForm=Ger _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 erythrocytic erythrocytic ADJ JJ Degree=Pos _ _ _ _ 17 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 present present ADJ JJ Degree=Pos _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 megakaryocytes megakaryocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1859 # text = Transcriptional effects in both lineages might then be mediated in part by the same specific trans-acting factors. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 both both DET DT _ _ _ _ _ 5 lineages lineage NOUN NNS Number=Plur _ _ _ _ 6 might might AUX MD VerbForm=Fin _ _ _ _ 7 then then ADV RB PronType=Dem _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 part part NOUN NN Number=Sing _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 same same ADJ JJ Degree=Pos _ _ _ _ 15 specific specific ADJ JJ Degree=Pos _ _ _ _ 16 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 -acting -act VERB VBG VerbForm=Ger _ _ _ _ 18 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1860 # text = Our data strengthen the idea of a close association between the erythrocytic and the megakaryocytic lineages and could also explain the expression of markers specific to the erythrocytic and megakaryocytic lineages in most erythroblastic and megakaryoblastic permanent cell lines. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 strengthen strengthan ADP IN Typo=Yes _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 idea idea NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 close close ADJ JJ Degree=Pos _ _ _ _ 9 association association NOUN NN Number=Sing _ _ _ _ 10 between between ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 erythrocytic erythrocytic ADJ JJ Degree=Pos _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 16 lineages lineage NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 could could AUX MD VerbForm=Fin _ _ _ _ 19 also also ADV RB _ _ _ _ _ 20 explain explain VERB VB VerbForm=Inf _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 markers marker NOUN NNS Number=Plur _ _ _ _ 25 specific specific ADJ JJ Degree=Pos _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 erythrocytic erythrocytic ADJ JJ Degree=Pos _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 31 lineages lineage NOUN NNS Number=Plur _ _ _ _ 32 in in ADV RB _ _ _ _ _ 33 most most ADV RBS _ _ _ _ _ 34 erythroblastic erythroblastic ADJ JJ Degree=Pos _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 megakaryoblastic megakaryoblastic ADJ JJ Degree=Pos _ _ _ _ 37 permanent permanent ADJ JJ Degree=Pos _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1861 # text = Document 00300370 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300370 00300370 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1862 # text = Tumor necrosis factor alpha decreases, and interleukin-10 increases, the sensitivity of human monocytes to dexamethasone: potential regulation of the glucocorticoid receptor. 1 Tumor tumor ADP IN _ _ _ _ _ 2 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 alpha alpha ADP IN _ _ _ _ _ 5 decreases decrease NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 10 10 NUM CD NumType=Card _ _ _ _ 11 increases increase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 dexamethasone dexamethasone VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 20 : : PUNCT : _ _ _ _ _ 21 potential potential ADJ JJ Degree=Pos _ _ _ _ 22 regulation regulation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 26 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1863 # text = Resistance to glucocorticoid therapy has been observed in patients with autoimmune/inflammatory diseases and may be related to the inflammatory process itself. 1 Resistance resistance NOUN NN Number=Sing _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 4 therapy therapy NOUN NN Number=Sing _ _ _ _ 5 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 7 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 patients patient NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 autoimmune autoimmune NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 14 diseases diseasis NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 may may AUX MD VerbForm=Fin _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 related related ADJ JJ Degree=Pos _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 22 process process NOUN NN Number=Sing _ _ _ _ 23 itself itself PRON PRP Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1864 # text = The aim of this study was to examine the ability of tumor necrosis factor alpha (TNFalpha, a proinflammatory cytokine) and interleukin (IL)-10 (an anti-inflammatory cytokine) to differentially regulate the sensitivity of human monocytes/macrophages to glucocorticoids. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 aim aim NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 study study NOUN NN Number=Sing _ _ _ _ 6 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 examine examine VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 ability ability NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 tumor tumor NOUN NN Number=Sing _ _ _ _ 13 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 alpha alpha NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 21 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 - - SYM SYM _ _ _ _ SpaceAfter=No 29 10 10 NUM CD NumType=Card _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 33 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 differentially differentially ADV RB _ _ _ _ _ 37 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 human human ADJ JJ Degree=Pos _ _ _ _ 42 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 / / PUNCT , _ _ _ _ SpaceAfter=No 44 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 45 to to ADP IN _ _ _ _ _ 46 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 1865 # text = To accomplish this, we first analyzed the pattern of TNFalpha and IL-10 inhibition by dexamethasone in LPS-stimulated whole-blood cell cultures. 1 To to PART TO _ _ _ _ _ 2 accomplish accomplish VERB VB VerbForm=Inf _ _ _ _ 3 this this PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 first first ADV RB _ _ _ _ _ 7 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 pattern pattern NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 10 10 NUM CD NumType=Card _ _ _ _ 16 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 whole whole ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 blood blood NOUN NN Number=Sing _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 cultures culture NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1866 # text = Second, we studied the modulation of the sensitivity of these cells to dexamethasone by preincubation with TNFalpha or IL-10 and measurement of LPS-stimulated IL-6 secretion. 1 Second second ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 modulation modulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 dexamethasone dexamethasone VERB VB VerbForm=Inf _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 preincubation preincubation NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - SYM SYM _ _ _ _ SpaceAfter=No 22 10 10 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 measurement measurement NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 6 6 NUM CD NumType=Card _ _ _ _ 32 secretion secretion NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1867 # text = In addition, we evaluated the effect of dexamethasone on phorbolmyristate-acetate-stimulated IL-1 receptor antagonist secretion by the human monocytic cell line U937. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 evaluated evaluate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 effect effect NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 phorbolmyristate-acetate-stimulated phorbolmyristate-acetate-stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 receptor receptor NOUN NN Number=Sing _ _ _ _ 16 antagonist antagonist NOUN NN Number=Sing _ _ _ _ 17 secretion secretion NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 line line NOUN NN Number=Sing _ _ _ _ 24 U937 U937 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1868 # text = Finally, we investigated whether the modulation of corticosensitivity in TNFalpha- and IL-10-pretreated U937 cells was related to a change of the glucocorticoid receptor concentration and affinity. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 whether whether SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 modulation modulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 corticosensitivity corticosensitivity NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 pretreated pretreate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 U937 U937 NUM CD NumType=Card _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 related related ADJ JJ Degree=Pos _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 change change NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 29 receptor receptor NOUN NN Number=Sing _ _ _ _ 30 concentration concentration NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 affinity affinity NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1869 # text = Dexamethasone had different effects on LPS-induced TNFalpha and IL-10 secretion; whereas it suppressed TNFalpha in a dose-dependent fashion, its effect on IL-10 secretion was biphasic, producing stimulation at lower, and inhibition at higher doses. 1 Dexamethasone Dexamethasone PRON NN Number=Sing _ _ _ _ 2 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 different different ADJ JJ Degree=Pos _ _ _ _ 4 effects effect NOUN NNS Number=Plur _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 induced induced VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 10 10 NUM CD NumType=Card _ _ _ _ 14 secretion secretion NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ; ; PUNCT , _ _ _ _ _ 16 whereas whereas SCONJ IN _ _ _ _ _ 17 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 18 suppressed suppress VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 25 fashion fashion NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 28 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 effect effect NOUN NN Number=Sing _ _ _ _ 30 on on ADP IN _ _ _ _ _ 31 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 10 10 NUM CD NumType=Card _ _ _ _ 34 secretion secretion NOUN NN Number=Sing _ _ _ _ 35 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 36 biphasic biphasic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 producing produce VERB VBG VerbForm=Ger _ _ _ _ 39 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 40 at at ADP IN _ _ _ _ _ 41 lower lower ADJ JJR Degree=Cmp _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 45 at at ADP IN _ _ _ _ _ 46 higher higher ADJ JJR Degree=Cmp _ _ _ _ 47 doses dos NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 1870 # text = The concentration of LPS employed influenced the effect of dexamethasone on IL-10 secretion (P < 0.001). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 concentration concentration NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 LPS LPS PROPN NNP Number=Sing _ _ _ _ 5 employed employ VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 influenced influence VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 effect effect NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 10 10 NUM CD NumType=Card _ _ _ _ 15 secretion secretion NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 P p NOUN NN Number=Sing _ _ _ _ 18 < < PUNCT -LRB- _ _ _ _ _ 19 0.001 0.001 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1871 # text = Pretreatment with TNFalpha diminished, and with IL-10 improved, the ability of dexamethasone to suppress IL-6 secretion in whole-blood cell cultures (P < 0.01 for both) and to enhance IL-1 receptor antagonist secretion by U937 cells (P < 0.05 for both). 1 Pretreatment Pretreatment NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 4 diminished diminish VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 10 10 NUM CD NumType=Card _ _ _ _ 11 improved improve VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 ability ability NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 19 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 6 6 NUM CD NumType=Card _ _ _ _ 22 secretion secretion NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 whole whole ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 blood blood NOUN NN Number=Sing _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 cultures culture NOUN NNS Number=Plur _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 P p NOUN NN Number=Sing _ _ _ _ 31 < < PUNCT -LRB- _ _ _ _ _ 32 0.01 0.01 NUM CD NumType=Card _ _ _ _ 33 for for ADP IN _ _ _ _ _ 34 both both CCONJ CC _ _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 to to PART TO _ _ _ _ _ 38 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 39 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT , _ _ _ _ SpaceAfter=No 41 1 1 NUM CD NumType=Card _ _ _ _ 42 receptor receptor NOUN NN Number=Sing _ _ _ _ 43 antagonist antagonist NOUN NN Number=Sing _ _ _ _ 44 secretion secretion NOUN NN Number=Sing _ _ _ _ 45 by by ADP IN _ _ _ _ _ 46 U937 U937 NUM CD NumType=Card _ _ _ _ 47 cells cell NOUN NNS Number=Plur _ _ _ _ 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 P p NOUN NN Number=Sing _ _ _ _ 50 < < PUNCT -LRB- _ _ _ _ _ 51 0.05 0.05 NUM CD NumType=Card _ _ _ _ 52 for for ADP IN _ _ _ _ _ 53 both both DET DT _ _ _ _ SpaceAfter=No 54 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 1872 # text = TNFalpha decreased (P < 0.001), while IL-10 increased (P < 0.001), the concentration of dexamethasone binding sites in these cells, with no discernible effect on their binding affinity. 1 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 2 decreased decreased VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 P p NOUN NN Number=Sing _ _ _ _ 5 < < PUNCT -LRB- _ _ _ _ _ 6 0.001 0.001 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 while while SCONJ IN _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - SYM SYM _ _ _ _ SpaceAfter=No 12 10 10 NUM CD NumType=Card _ _ _ _ 13 increased increased VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 P p NOUN NN Number=Sing _ _ _ _ 16 < < PUNCT -LRB- _ _ _ _ _ 17 0.001 0.001 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 concentration concentration NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 24 binding bind VERB VBG VerbForm=Ger _ _ _ _ 25 sites site NOUN NNS Number=Plur _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 no no DET DT _ _ _ _ _ 32 discernible discernible ADJ JJ Degree=Pos _ _ _ _ 33 effect effect NOUN NN Number=Sing _ _ _ _ 34 on on ADP IN _ _ _ _ _ 35 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 36 binding binding NOUN NN Number=Sing _ _ _ _ 37 affinity affinity NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 1873 # text = We conclude that glucocorticoids differentially modulate TNFalpha and IL-10 secretion by human monocytes in a LPS dose-dependent fashion and that the sensitivity of these cells to glucocorticoids is altered by TNFalpha or IL-10 pretreatment; TNFalpha blocks their effects, whereas IL-10 acts synergistically with glucocorticoids. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 5 differentially differentially ADV RB _ _ _ _ _ 6 modulate modulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 10 10 NUM CD NumType=Card _ _ _ _ 12 secretion secretion NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 LPS LPS PROPN NNP Number=Sing _ _ _ _ 19 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 22 fashion fashion NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 32 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 altered alter VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 36 or or CCONJ CC _ _ _ _ _ 37 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT , _ _ _ _ SpaceAfter=No 39 10 10 NUM CD NumType=Card _ _ _ _ 40 pretreatment pretreatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 ; ; PUNCT , _ _ _ _ _ 42 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 43 blocks block NOUN NNS Number=Plur _ _ _ _ 44 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 45 effects effect NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 whereas whereas SCONJ IN _ _ _ _ _ 48 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 - - SYM SYM _ _ _ _ SpaceAfter=No 50 10 10 NUM CD NumType=Card _ _ _ _ 51 acts acts NOUN NNS Number=Plur _ _ _ _ 52 synergistically synergistically ADV RB _ _ _ _ _ 53 with with ADP IN _ _ _ _ _ 54 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 1874 # text = This is accompanied by opposite glucocorticoid receptor changes, respectively opposing and favoring glucocorticoid actions. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 opposite opposite ADJ JJ Degree=Pos _ _ _ _ 6 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 changes change NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 respectively respectively ADV RB _ _ _ _ _ 11 opposing oppos VERB VBG VerbForm=Ger _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 favoring favor VERB VBG VerbForm=Ger _ _ _ _ 14 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 15 actions action NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 1875 # text = This study suggests that the pattern of pro-/antiinflammatory cytokine secretion may alter the response of patients to glucocorticoid therapy. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 pattern pattern NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 pro-/ pro-ith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 9 antiinflammatory antiinflammatory ADJ JJ Degree=Pos _ _ _ _ 10 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 11 secretion secretion NOUN NN Number=Sing _ _ _ _ 12 may may AUX MD VerbForm=Fin _ _ _ _ 13 alter alter VERB VB VerbForm=Inf _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 response response NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 patients patient NOUN NNS Number=Plur _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 glucocorticoid glucocorticoid VERB VB VerbForm=Inf _ _ _ _ 20 therapy therapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1876 # text = Document 00300379 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300379 00300379 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1877 # text = CD14-mediated signal pathway of Porphyromonas gingivalis lipopolysaccharide in human gingival fibroblasts. 1 CD14 CD14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -mediated -mediate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 signal signal ADJ JJ Degree=Pos _ _ _ _ 4 pathway pathway NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 Porphyromonas Porphyromonas PROPN NNP Number=Sing _ _ _ _ 7 gingivalis gingivalis PROPN NNP Number=Sing _ _ _ _ 8 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 gingival gingival NOUN NN Number=Sing _ _ _ _ 12 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1878 # text = Lipopolysaccharide (LPS) induces expression of inflammatory cytokines in monocytes/macrophages via CD14, one of the LPS receptors, which is expressed predominantly in these cells. 1 Lipopolysaccharide Lipopolysaccharide PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 9 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 14 via via ADP IN _ _ _ _ _ 15 CD14 CD14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 one one NUM CD NumType=Card _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 LPS Lp NOUN NNS Number=Plur _ _ _ _ 21 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 predominantly predominantly ADV RB _ _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1879 # text = It has been demonstrated that Porphyromonas gingivalis LPS (P-LPS) also is able to induce inflammatory cytokines in human gingival fibroblasts. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 4 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 Porphyromonas Porphyromonas PROPN NNP Number=Sing _ _ _ _ 7 gingivalis gingivalis PROPN NNP Number=Sing _ _ _ _ 8 LPS LPS PROPN NNP Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 P p PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 LPS Lps PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 able able ADJ JJ Degree=Pos _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 induce induce VERB VB VerbForm=Inf _ _ _ _ 19 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 20 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 gingival gingival NOUN NN Number=Sing _ _ _ _ 24 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1880 # text = Therefore, it is important to determine whether CD14 is expressed in gingival fibroblasts and to define the P-LPS-mediated signal-transducing mechanism in the cells. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 important important ADJ JJ Degree=Pos _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 determine determine VERB VB VerbForm=Inf _ _ _ _ 8 whether whether SCONJ IN _ _ _ _ _ 9 CD14 CD14 PROPN NNP Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 gingival gingival ADJ JJ Degree=Pos _ _ _ _ 14 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 define define VERB VB VerbForm=Inf _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 P p NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 LPS Lps NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 transducing transducing NOUN NN Number=Sing _ _ _ _ 27 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1881 # text = In this study, we observed unexpectedly by immunohistochemical, Western blotting (immunoblotting), and Northern (RNA) blotting assays that CD14 is expressed at high density in human gingival fibroblasts. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 unexpectedly unexpectedly ADV RB _ _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 immunohistochemical immunohistochemical ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 Western western ADJ JJ Degree=Pos _ _ _ _ 12 blotting blotting NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 immunoblotting immunoblott VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 Northern Northern PROPN NNP Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 RNA RNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 blotting blott VERB VBG VerbForm=Ger _ _ _ _ 23 assays assay NOUN NNS Number=Plur _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 14 14 NUM CD NumType=Card _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 at at ADP IN _ _ _ _ _ 30 high high ADJ JJ Degree=Pos _ _ _ _ 31 density density NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 human human ADJ JJ Degree=Pos _ _ _ _ 34 gingival gingival NOUN NN Number=Sing _ _ _ _ 35 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 1882 # text = P-LPS-induced expression of the monocyte chemoattractant protein 1 (MCP-1) gene in the cells was inhibited markedly by treatment with anti-human CD14 antibody and was completely inhibited by herbimycin A, a potent inhibitor of tyrosine kinase. 1 P- P- PUNCT NFP _ _ _ _ SpaceAfter=No 2 LPS LPS X GW _ _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 9 chemoattractant chemoattractant NOUN NN Number=Sing _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 1 1 NUM CD NumType=Card _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 MCP Mcp NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 markedly markedly ADV RB _ _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 treatment treatment NOUN NN Number=Sing _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 anti-human anti-human ADJ JJ Degree=Pos _ _ _ _ 28 CD CD NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 14 14 NUM CD NumType=Card _ _ _ _ 30 antibody antibody NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 33 completely completely ADV RB _ _ _ _ _ 34 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 herbimycin herbimycin NOUN NN Number=Sing _ _ _ _ 37 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 potent potent NOUN NN Number=Sing _ _ _ _ 41 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 44 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 1883 # text = The inhibitor also dramatically inhibited monocyte chemotactic activity of and MCP-1 production by the cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 dramatically dramatically ADV RB _ _ _ _ _ 5 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 7 chemotactic chemotactic ADJ JJ Degree=Pos _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 MCP MCP NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 production production NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1884 # text = Furthermore, P-LPS-induced expression of the MCP-1 gene in the cells also was blocked by inhibitors of two transcription factors, i.e., curcumin, an inhibitor of AP-1, and pyrolidine dithiocarbamate, an inhibitor of NF-kappaB. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 P- P- X GW _ _ _ _ SpaceAfter=No 4 LPS LPS X GW _ _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 MCP Mcp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 also also ADV RB _ _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 two two NUM CD NumType=Card _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 i.e. i.e. X FW _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 curcumin curcumin NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 pyrolidine pyrolidine NOUN NN Number=Sing _ _ _ _ 40 dithiocarbamate dithiocarbamate NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 1885 # text = Both inhibitors inhibited monocyte chemotactic activity in the culture supernatant of P-LPS-treated cells. 1 Both both DET DT _ _ _ _ _ 2 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 3 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 5 chemotactic chemotactic ADJ JJ Degree=Pos _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 culture culture NOUN NN Number=Sing _ _ _ _ 10 supernatant supernatant NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 P- P- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1886 # text = Gel shift mobility assay showed stimulation of the AP-1 and NF-kappaB contents in P-LPS-treated cells. 1 Gel gel NOUN NN Number=Sing _ _ _ _ 2 shift shift NOUN NN Number=Sing _ _ _ _ 3 mobility mobility NOUN NN Number=Sing _ _ _ _ 4 assay assay NOUN NN Number=Sing _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 16 contents contents NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 P- P- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1887 # text = This study is the first to demonstrate the expression of CD14 in human gingival fibroblasts and to show that the signal-transducing pathway of P-LPS in the cells is mediated by CD14. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 demonstrate demonstrate VERB VB VerbForm=Inf _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 14 14 NUM CD NumType=Card _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 gingival gingival NOUN NN Number=Sing _ _ _ _ 16 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 show show VERB VB VerbForm=Inf _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 transducing transduce VERB VBG VerbForm=Ger _ _ _ _ 25 pathway pathway NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 P P PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 LPS LPS PROPN NNP Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 CD14 CD14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1888 # text = Document 00300384 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300384 00300384 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1889 # text = UV-induced CYP1A1 gene expression in human cells is mediated by tryptophan. 1 UV haUve PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 CYP1A1 Cyp1a1 NOUN NN Number=Sing _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 tryptophan tryptophan NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1890 # text = Induction of cytochrome P-4501A1 (CYP1A1) activity by UV has been observed earlier in animal studies via a mechanism that has not yet been resolved. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cytochrome cytochrome NOUN NN Number=Sing _ _ _ _ 4 P-4501A1 P-4501A1 NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 CYP1 CYP1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 A1 A1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 UV UV PROPN NNP Number=Sing _ _ _ _ 12 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 14 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 earlier earlier ADV RBR Degree=Cmp _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 animal animal NOUN NN Number=Sing _ _ _ _ 18 studies study NOUN NNS Number=Plur _ _ _ _ 19 via via ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 not not PART RB _ _ _ _ _ 25 yet yet ADV RB _ _ _ _ _ 26 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 27 resolved resolve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1891 # text = Our previous data have indicated that formylated indolocarbazoles which are formed by UV irradiation of tryptophan solutions are very potent 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 previous previous ADJ JJ Degree=Pos _ _ _ _ 3 data data NOUN NN Number=Sing _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 indicated indicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 formylated formylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 indolocarbazoles indolocarbazole NOUN NNS Number=Plur _ _ _ _ 9 which which PRON WDT PronType=Rel _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 UV UV PROPN NNP Number=Sing _ _ _ _ 14 irradiation irradiation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 tryptophan tryptophan ADJ JJ Degree=Pos _ _ _ _ 17 solutions solution NOUN NNS Number=Plur _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 very very ADV RB _ _ _ _ _ 20 potent potent ADJ JJ Degree=Pos _ _ _ _ # sent_id = 1892 # text = Ah-receptor agonists. 1 Ah ah INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 receptor receptor NOUN NN Number=Sing _ _ _ _ 4 agonists agonist NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 . . PUNCT . _ _ _ _ _ # sent_id = 1893 # text = To evaluate the effect of UV light on cytochrome P4501A1 gene expression, we studied the induction of CYP1A1 mRNA by UV irradiation of cultured human keratinocytes (HaCaT cell line), primary human blood lymphocytes and mouse Hepa-1 cells. 1 To to PART TO _ _ _ _ _ 2 evaluate evaluate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effect effect NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 UV UV NOUN NN Number=Sing _ _ _ _ 7 light light NOUN NN Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 cytochrome cytochrome NOUN NN Number=Sing _ _ _ _ 10 P4501A1 P4501A1 NOUN NN Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 15 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 induction induction NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 CYP1A1 CYP1A1 PROPN NNP Number=Sing _ _ _ _ 20 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 UV UV PROPN NNP Number=Sing _ _ _ _ 23 irradiation irradiation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 cultured culture ADJ JJ Degree=Pos _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 keratinocytes keratinocyte NOUN NNS Number=Plur _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 HaCaT Hacat NOUN NN Number=Sing _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 primary primary ADJ JJ Degree=Pos _ _ _ _ 35 human human ADJ JJ Degree=Pos _ _ _ _ 36 blood blood NOUN NN Number=Sing _ _ _ _ 37 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 mouse mouse NOUN NN Number=Sing _ _ _ _ 40 Hepa Hepa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT , _ _ _ _ SpaceAfter=No 42 1 1 NUM CD NumType=Card _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 1894 # text = The cells were exposed to UV light delivered by a bank of 6 Philips TL20/12RS sun lamps emitting primarily in the UVB range in the absence and presence of tryptophan. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 exposed expose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 UV UV PROPN NNP Number=Sing _ _ _ _ 7 light light NOUN NN Number=Sing _ _ _ _ 8 delivered deliver VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 bank bank NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 6 6 NUM CD NumType=Card _ _ _ _ 14 Philips Philips PROPN NNP Number=Sing _ _ _ _ 15 TL20/12RS tl20/12rs PROPN NNP Number=Sing _ _ _ _ 16 sun sun NOUN NN Number=Sing _ _ _ _ 17 lamps lamp NOUN NNS Number=Plur _ _ _ _ 18 emitting emit VERB VBG VerbForm=Ger _ _ _ _ 19 primarily primarily ADV RB _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 UVB uvb PROPN NNP Number=Sing _ _ _ _ 23 range range NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 absence absence NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 presence presence NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 tryptophan tryptophan NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1895 # text = A semiquantitative reverse transcriptase-linked polymerase chain reaction (RT-PCR) was used for analysis of gene expression in the treated cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 semiquantitative semiquantitative ADJ JJ Degree=Pos _ _ _ _ 3 reverse reverse NOUN NN Number=Sing _ _ _ _ 4 transcriptase transcriptase NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 8 chain chain NOUN NN Number=Sing _ _ _ _ 9 reaction reaction NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 RT Rt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 PCR Pcr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 analysis analysis NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1896 # text = The results show that the CYP1A1 mRNA level induced by UV in the presence of tryptophan was higher than that induced by UV alone in both HaCaT cells and lymphocytes after 3 h of incubation post-UV irradiation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 CYP1A1 CYP1A1 PROPN NNP Number=Sing _ _ _ _ 7 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 8 level level NOUN NN Number=Sing _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 UV UV PROPN NNP Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 presence presence NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 tryptophan tryptophan NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 higher higher ADJ JJR Degree=Cmp _ _ _ _ 19 than than ADP IN _ _ _ _ _ 20 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 21 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 UV UV PROPN NNP Number=Sing _ _ _ _ 24 alone alone ADV RB _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 both both DET DT _ _ _ _ _ 27 HaCaT Hacat ADJ JJ Degree=Pos _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 31 after after ADP IN _ _ _ _ _ 32 3 3 NUM CD NumType=Card _ _ _ _ 33 h h NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 incubation incubation NOUN NN Number=Sing _ _ _ _ 36 post post NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 UV uv NOUN NN Number=Sing _ _ _ _ 39 irradiation irradiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1897 # text = To find out if the induction by UV light is caused by the formation of an Ah receptor ligand, Hepa-1 wild-type and Ah receptor deficient c12 cell lines were applied. 1 To to PART TO _ _ _ _ _ 2 find find VERB VB VerbForm=Inf _ _ _ _ 3 out out ADP RP _ _ _ _ _ 4 if if SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 induction induction NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 UV UV PROPN NNP Number=Sing _ _ _ _ 9 light light NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 caused cause VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 formation formation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 Ah ah PROPN NNP Number=Sing _ _ _ _ 18 receptor receptor NOUN NN Number=Sing _ _ _ _ 19 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 Hepa Hepa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 -1 -1 NUM CD NumType=Card _ _ _ _ 23 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 type type NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 Ah ah PROPN NNP Number=Sing _ _ _ _ 28 receptor receptor NOUN NN Number=Sing _ _ _ _ 29 deficient deficient VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 c12 c12 NUM CD NumType=Card _ _ _ _ 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 lines line NOUN NNS Number=Plur _ _ _ _ 33 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 applied apply VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 1898 # text = Wild-type (wt) cells were inducible either by the tryptophan photoproduct 6-formylindolo[3,2-b]carbazole (FICZ) or by UV-irradiation but very low or undetectable levels were observed in the c12 cells. 1 Wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 type type NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 wt wt NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 10 either either CCONJ CC _ _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 tryptophan tryptophan ADJ JJ Degree=Pos _ _ _ _ 14 photoproduct photoproduct NOUN NN Number=Sing _ _ _ _ 15 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT : _ _ _ _ SpaceAfter=No 17 formylindolo formylindolo NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 [3 [3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 b] b] PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 carbazole carbazole NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 FICZ FICZ PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 UV UV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 irradiation irradiation NOUN NN Number=Sing _ _ _ _ 32 but but CCONJ CC _ _ _ _ _ 33 very very ADV RB _ _ _ _ _ 34 low low ADJ JJ Degree=Pos _ _ _ _ 35 or or CCONJ CC _ _ _ _ _ 36 undetectable undetectable ADJ JJ Degree=Pos _ _ _ _ 37 levels level NOUN NNS Number=Plur _ _ _ _ 38 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 39 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 c12 c12 NOUN NN Number=Sing _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 1899 # text = This shows that the induction of gene expression by FICZ and UV is Ah receptor dependent. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 shows show VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 induction induction NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 FICZ FICZ PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 UV UV PROPN NNP Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 Ah ah PROPN NNP Number=Sing _ _ _ _ 15 receptor receptor NOUN NN Number=Sing _ _ _ _ 16 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1900 # text = Together, these results indicate that UV-induced CYP1A1 gene expression in mammalian cells is mediated by an Ah receptor ligand formed from tryptophan. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 UV uv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 CYP1A1 Cyp1a1 NOUN NN Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 Ah ah PROPN NNP Number=Sing _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ _ 22 ligand ligand NOUN NN Number=Sing _ _ _ _ 23 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 tryptophan tryptophan NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1901 # text = Thus, the photoproducts of tryptophan are suggested to be mediators of light via binding to the Ah receptor and as such also could have a role in light-regulated biological rhythms. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 photoproducts photoproduct NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 tryptophan tryptophan NOUN NN Number=Sing _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 suggested suggest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 mediators mediator NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 light light NOUN NN Number=Sing _ _ _ _ 14 via via NOUN NN Number=Sing _ _ _ _ 15 binding binding VERB VBG VerbForm=Ger _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 Ah ah PROPN NNP Number=Sing _ _ _ _ 19 receptor receptor NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 as as ADP IN _ _ _ _ _ 22 such such ADJ JJ Degree=Pos _ _ _ _ 23 also also ADV RB _ _ _ _ _ 24 could could AUX MD VerbForm=Fin _ _ _ _ 25 have have VERB VB VerbForm=Inf _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 role role NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 light light NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 biological biological ADJ JJ Degree=Pos _ _ _ _ 33 rhythms rhythm NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1902 # text = Document 00300385 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300385 00300385 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1903 # text = The Ah receptor recognizes DNA binding sites for the B cell transcription factor, BSAP: a possible mechanism for dioxin-mediated alteration of CD19 gene expression in human B lymphocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Ah ah PROPN NNP Number=Sing _ _ _ _ 3 receptor receptor NOUN NN Number=Sing _ _ _ _ 4 recognizes recognize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 DNA dna NOUN NN Number=Sing _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 sites site NOUN NNS Number=Plur _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 B b ADJ JJ Degree=Pos _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 BSAP Bsap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 : : PUNCT : _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 possible possible ADJ JJ Degree=Pos _ _ _ _ 19 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 dioxin- dioxin- SYM NFP _ _ _ _ SpaceAfter=No 22 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 alteration alteration NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 19 19 NUM CD NumType=Card _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 B b NOUN NN Number=Sing _ _ _ _ 32 lymphocytes. lymphocytes. NOUN NN Number=Sing _ _ _ SpacesAfter=\s\n # sent_id = 1904 # text = 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) inhibits murine and human B lymphocyte immunoglobulin production through an unknown mechanism. 1 2,3,7,8-tetrachlorodibenzo-p-dioxin 2,3,7,8-tetrachlorodibenzo-p-dioxin NOUN NN Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 TCDD tCDd NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 murine murine NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 11 immunoglobulin immunoglobulin ADP IN _ _ _ _ _ 12 production production NOUN NN Number=Sing _ _ _ _ 13 through through ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 unknown unknown ADJ JJ Degree=Pos _ _ _ _ 16 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1905 # text = This study investigated the effect of TCDD on expression of the CD19 gene in a human B lymphocyte cell line. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 TCDD tCDd NOUN NN Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 19 19 NUM CD NumType=Card _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1906 # text = Northern blot analysis showed that TCDD treatment decreased steady state levels of CD19 mRNA by 67% in the IM-9 cell line. 1 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 TCDD TCDD PROPN NNP Number=Sing _ _ _ _ 7 treatment treatment NOUN NN Number=Sing _ _ _ _ 8 decreased decrease VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 steady steady ADJ JJ Degree=Pos _ _ _ _ 10 state state NOUN NN Number=Sing _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 19 19 NUM CD NumType=Card _ _ _ _ 15 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 67 67 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 % % SYM NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 IM Im NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 9 9 NUM CD NumType=Card _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1907 # text = Using a gel mobility shift assay, we identified a DNA-binding complex in IM-9 nuclear extracts that by several criteria appears to be the Ah receptor. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 gel gel NOUN NN Number=Sing _ _ _ _ 4 mobility mobility NOUN NN Number=Sing _ _ _ _ 5 shift shift NOUN NN Number=Sing _ _ _ _ 6 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 9 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 complex complex NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 IM Im PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 9 9 NUM CD NumType=Card _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 extracts extract NOUN NNS Number=Plur _ _ _ _ 21 that that PRON WDT PronType=Rel _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 several several ADJ JJ Degree=Pos _ _ _ _ 24 criteria criteria NOUN NN Number=Sing _ _ _ _ 25 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 be be AUX VB VerbForm=Inf _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 Ah ah PROPN NNP Number=Sing _ _ _ _ 30 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1908 # text = In addition, the Ah receptor complex recognized a DNA binding site for B cell lineage-specific activator protein (BSAP) in the promoter region of the human CD19 gene which is similar to the consensus 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 Ah ah PROPN NNP Number=Sing _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 complex complex NOUN NN Number=Sing _ _ _ _ 8 recognized recognize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 B b ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 specific specific ADJ JJ Degree=Pos _ _ _ _ 19 activator activator NOUN NN Number=Sing _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 BSAP BSAP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 promoter promoter NOUN NN Number=Sing _ _ _ _ 27 region region NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 19 19 NUM CD NumType=Card _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ _ 34 which which PRON WDT PronType=Rel _ _ _ _ 35 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 similar similar ADJ JJ Degree=Pos _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 consensus consensus NOUN NN Number=Sing _ _ _ _ # sent_id = 1909 # text = Ah receptor DNA binding site. 1 Ah ah ADJ JJ Degree=Pos _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ _ 3 DNA dna NOUN NN Number=Sing _ _ _ _ 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 . . PUNCT . _ _ _ _ _ # sent_id = 1910 # text = These results suggest that the AhR could interfere with BSAP-stimulated CD19 gene transcription by competition for a common DNA binding site. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 AhR Ahr NOUN NN Number=Sing _ _ _ _ 7 could could AUX MD VerbForm=Fin _ _ _ _ 8 interfere interfere VERB VB VerbForm=Inf _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 BSAP BSAP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 19 19 NUM CD NumType=Card _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 competition competition NOUN NN Number=Sing _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 common common ADJ JJ Degree=Pos _ _ _ _ 22 DNA dna NOUN NN Number=Sing _ _ _ _ 23 binding bind VERB VBG VerbForm=Ger _ _ _ _ 24 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1911 # text = Document 00300387 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300387 00300387 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1912 # text = Apoptosis and growth inhibition in malignant lymphocytes after treatment with arsenic trioxide at clinically achievable concentrations [see comments] BACKGROUND: Arsenic trioxide (As2O3) can induce clinical remission in patients with acute promyelocytic leukemia via induction of differentiation and programmed cell death (apoptosis). 1 Apoptosis Apoptosis PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 growth growth NOUN NN Number=Sing _ _ _ _ 4 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 malignant malignant ADJ JJ Degree=Pos _ _ _ _ 7 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 8 after after ADP IN _ _ _ _ _ 9 treatment treatment NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 arsenic arsenic NOUN NN Number=Sing _ _ _ _ 12 trioxide trioxide NOUN NN Number=Sing _ _ _ _ 13 at at ADP IN _ _ _ _ _ 14 clinically clinically ADV RB _ _ _ _ _ 15 achievable achievable ADJ JJ Degree=Pos _ _ _ _ 16 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 17 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 see see VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 19 comments comment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n 21 BACKGROUND background NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 : : PUNCT : _ _ _ _ _ 23 Arsenic arsenic ADJ JJ Degree=Pos _ _ _ _ 24 trioxide trioxide NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 As2 As2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 O3 O3 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 can can AUX MD VerbForm=Fin _ _ _ _ 30 induce induce VERB VB VerbForm=Inf _ _ _ _ 31 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 32 remission remission NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 patients patient NOUN NNS Number=Plur _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 acute acute ADJ JJ Degree=Pos _ _ _ _ 37 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ _ 38 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 39 via via ADP IN _ _ _ _ _ 40 induction induction NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 programmed programm VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 cell cell NOUN NN Number=Sing _ _ _ _ 46 death death NOUN NN Number=Sing _ _ _ _ 47 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 48 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 1913 # text = We investigated the effects of As2O3 on a panel of malignant lymphocytes to determine whether growth-inhibitory and apoptotic effects of As2O3 can be observed in these cells at clinically achievable concentrations. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effects effect NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 As2O3 As2O3 NUM CD NumType=Card _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 panel panel NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 malignant malignant ADJ JJ Degree=Pos _ _ _ _ 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 determine determine VERB VB VerbForm=Inf _ _ _ _ 15 whether whether SCONJ IN _ _ _ _ _ 16 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 21 effects effect NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 As2O3 As2O3 NOUN NN Number=Sing _ _ _ _ 24 can can AUX MD VerbForm=Fin _ _ _ _ 25 be be AUX VB VerbForm=Inf _ _ _ _ 26 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 at at ADP IN _ _ _ _ _ 31 clinically clinically ADV RB _ _ _ _ _ 32 achievable achievable ADJ JJ Degree=Pos _ _ _ _ 33 concentrations concentration NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 1914 # text = METHODS: Eight malignant lymphocytic cell lines and primary cultures of lymphocytic leukemia and lymphoma cells were treated with As2O3, with or without dithiothreitol (DTT) or buthionine sulfoximine (BSO) (an inhibitor of glutathione synthesis). 1 METHODS method NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Eight eight PROPN NNP Number=Sing _ _ _ _ 4 malignant malignant ADJ JJ Degree=Pos _ _ _ _ 5 lymphocytic lymphocytic ADJ JJ Degree=Pos _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 lines line NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 primary primary ADJ JJ Degree=Pos _ _ _ _ 10 cultures culture NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 lymphocytic lymphocytic ADJ JJ Degree=Pos _ _ _ _ 13 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 treated treat VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 As2O3 As2O3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 without without ADP IN _ _ _ _ _ 25 dithiothreitol dithiothreitol NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 DTT DTT NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 or or CCONJ CC _ _ _ _ _ 30 buthionine buthionine NUM CD NumType=Card _ _ _ _ 31 sulfoximine sulfoximine NOUN NN Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 BSO BSO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 glutathione glutathione ADJ JJ Degree=Pos _ _ _ _ 40 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 1915 # text = Apoptosis was assessed by cell morphology, flow cytometry, annexin V protein level, and terminal deoxynucleotidyl transferase labeling of DNA fragments. 1 Apoptosis Apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 assessed assess VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 morphology morphology NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 flow flow NOUN NN Number=Sing _ _ _ _ 9 cytometry cytometry NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 annexin annexin ADP IN _ _ _ _ _ 12 V V PROPN NNP Number=Sing _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 18 deoxynucleotidyl deoxynucleotidyl NOUN NN Number=Sing _ _ _ _ 19 transferase transferase NOUN NN Number=Sing _ _ _ _ 20 labeling labeling NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 DNA dna NOUN NN Number=Sing _ _ _ _ 23 fragments fragment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1916 # text = Cellular proliferation was determined by 5-bromo-2'-deoxyuridine incorporation into DNA and flow cytometry and by use of a mitotic arrest assay. 1 Cellular celular ADJ JJ Degree=Pos _ _ _ _ 2 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 bromo bromo NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 '- '- PUNCT . _ _ _ _ SpaceAfter=No 12 deoxyuridine deoxyuridine NOUN NN Number=Sing _ _ _ _ 13 incorporation incorporation NOUN NN Number=Sing _ _ _ _ 14 into into ADP IN _ _ _ _ _ 15 DNA dna NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 flow flow VERB VB VerbForm=Inf _ _ _ _ 18 cytometry cytometry NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 use use NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 mitotic mitotic ADJ JJ Degree=Pos _ _ _ _ 25 arrest arrest NOUN NN Number=Sing _ _ _ _ 26 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1917 # text = Mitochondrial transmembrane potential (delta psi(m)) was measured by means of rhodamine 123 staining and flow cytometry. 1 Mitochondrial Mitochondrial ADJ JJ Degree=Pos _ _ _ _ 2 transmembrane transmembrane NOUN NN Number=Sing _ _ _ _ 3 potential potential NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 delta delta NOUN NN Number=Sing _ _ _ _ 6 psi psi NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 m m NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 measured measure VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 means means NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 rhodamine rhodamine NOUN NN Number=Sing _ _ _ _ 17 123 123 NUM CD NumType=Card _ _ _ _ 18 staining stain VERB VBG VerbForm=Ger _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 flow flow VERB VB VerbForm=Inf _ _ _ _ 21 cytometry cytometry NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1918 # text = Protein expression was assessed by western blot analysis or immunofluorescence. 1 Protein protein NOUN NN Number=Sing _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 assessed assess VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 western western ADJ JJ Degree=Pos _ _ _ _ 7 blot blot NOUN NN Number=Sing _ _ _ _ 8 analysis analysis NOUN NN Number=Sing _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 immunofluorescence immunofluorescence NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 1919 # text = RESULTS: Therapeutic concentrations of As2O3 (1-2 microM) had dual effects on malignant lymphocytes: 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Therapeutic Therapeutic ADJ JJ Degree=Pos _ _ _ _ 4 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 As2O3 As2O3 NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 dual dual ADJ JJ Degree=Pos _ _ _ _ 15 effects effect NOUN NNS Number=Plur _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 malignant malignant ADJ JJ Degree=Pos _ _ _ _ 18 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 : : PUNCT : _ _ _ _ _ # sent_id = 1920 # text = 1) inhibition of growth through adenosine triphosphate (ATP) depletion and prolongation of cell cycle time and 2) induction of apoptosis. 1 1 1 X LS _ _ _ _ SpaceAfter=No 2 ) ) PUNCT -RRB- _ _ _ _ _ 3 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 growth growth NOUN NN Number=Sing _ _ _ _ 6 through through ADP IN _ _ _ _ _ 7 adenosine adenosine NOUN NN Number=Sing _ _ _ _ 8 triphosphate triphosphate NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 ATP ATP NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 depletion depletion NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 prolongation prolongation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 cycle cycle NOUN NN Number=Sing _ _ _ _ 18 time time NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 2 2 X LS _ _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 induction induction NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 apoptosis. apoptosis. NOUN NN Number=Sing _ _ _ _ # sent_id = 1921 # text = As2O3-induced apoptosis was preceded by delta psi(m) collapse. 1 As2O3 As2O3 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 preceded preced VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 delta delta NOUN NN Number=Sing _ _ _ _ 9 psi psi NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 m m NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 collapse collapse NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 1922 # text = DTT antagonized and BSO enhanced As2O3-induced ATP depletion, delta psi(m) collapse, and apoptosis. 1 DTT DTT PROPN NNP Number=Sing _ _ _ _ 2 antagonized antagonize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 BSO BSO PROPN NNP Number=Sing _ _ _ _ 5 enhanced enhance VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 As2O3 As2O3 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 ATP Atp NOUN NN Number=Sing _ _ _ _ 10 depletion depletion NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 delta delta NOUN NN Number=Sing _ _ _ _ 13 psi psi NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 m m NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 collapse collapse NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 apoptosis apoptosis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1923 # text = Caspase-3 activation, usually resulting from delta psi(m) collapse, was not always associated with As2O3-induced apoptosis. 1 Caspase Caspase INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 3 3 NUM CD NumType=Card _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 usually usually ADV RB _ _ _ _ _ 7 resulting result VERB VBG VerbForm=Ger _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 delta delta PROPN NNP Number=Sing _ _ _ _ 10 psi psi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 m m PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 collapse collapse NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 not not PART RB _ _ _ _ _ 18 always always ADV RB _ _ _ _ _ 19 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 As2O3 As2O3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1924 # text = As2O3 induced PML (promyelocytic leukemia) protein degradation but did not modulate expression of cell cycle-related proteins, including c-myc, retinoblastoma protein, cyclin-dependent kinase 4, cyclin D1, and p53, or expression of differentiation-related antigens. 1 As2O3 As2O3 X LS _ _ _ _ _ 2 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 PML pMl NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ _ 6 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 degradation degradation NOUN NN Number=Sing _ _ _ _ 10 but but CCONJ CC _ _ _ _ _ 11 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 related related ADJ JJ Degree=Pos _ _ _ _ 20 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 including include VERB VBG VerbForm=Ger _ _ _ _ 23 c- c- SYM NFP _ _ _ _ SpaceAfter=No 24 myc myc NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 retinoblastoma retinoblastoma NOUN NN Number=Sing _ _ _ _ 27 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 cyclin cyclin NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 32 kinase kinase NOUN NN Number=Sing _ _ _ _ 33 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 cyclin cyclin NOUN NN Number=Sing _ _ _ _ 36 D1 d1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 p53 p53 NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 or or CCONJ CC _ _ _ _ _ 42 expression expression NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 related related ADJ JJ Degree=Pos _ _ _ _ 47 antigens antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 1925 # text = CONCLUSIONS: Substantial growth inhibition and apoptosis without evidence of differentiation were induced in most malignant lymphocytic cells treated with 1-2 microM As2O3. 1 CONCLUSIONS conclusion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Substantial substantial ADJ JJ Degree=Pos _ _ _ _ 4 growth growth NOUN NN Number=Sing _ _ _ _ 5 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 8 without without ADP IN _ _ _ _ _ 9 evidence evidence NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADV RB _ _ _ _ _ 15 most most ADV RBS _ _ _ _ _ 16 malignant malignant ADJ JJ Degree=Pos _ _ _ _ 17 lymphocytic lymphocytic ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - SYM SYM _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ _ 24 microM microm NOUN NN Number=Sing _ _ _ _ 25 As2 As2 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 O3 O3 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 1926 # text = As2O3 may prove useful in the treatment of malignant lymphoproliferative disorders. 1 As as ADP IN _ _ _ _ SpaceAfter=No 2 2O3 2O3 NUM CD NumType=Card _ _ _ _ 3 may may AUX MD VerbForm=Fin _ _ _ _ 4 prove prove VERB VB VerbForm=Inf _ _ _ _ 5 useful useful ADJ JJ Degree=Pos _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 treatment treatment NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 malignant malignant ADJ JJ Degree=Pos _ _ _ _ 11 lymphoproliferative lymphoproliferative ADJ JJ Degree=Pos _ _ _ _ 12 disorders disorder NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1927 # text = Document 00300389 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300389 00300389 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1928 # text = The Legionella pneumophila rpoS gene is required for growth within Acanthamoeba castellanii. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Legionella Legionella PROPN NNP Number=Sing _ _ _ _ 3 pneumophila pneumophila NOUN NN Number=Sing _ _ _ _ 4 rpoS rpos NOUN NN Number=Sing _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 growth growth NOUN NN Number=Sing _ _ _ _ 10 within within ADP IN _ _ _ _ _ 11 Acanthamoeba Acanthamoeba PROPN NNP Number=Sing _ _ _ _ 12 castellanii castellanii NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1929 # text = To investigate regulatory networks in Legionella pneumophila, the gene encoding the homolog of the Escherichia coli stress and stationary-phase sigma factor RpoS was identified by complementation of an E. coli rpoS mutation. 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 4 networks network NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 Legionella Legionella PROPN NNP Number=Sing _ _ _ _ 7 pneumophila pneumophila PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 homolog homolog NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 Escherichia Escherichia PROPN NNP Number=Sing _ _ _ _ 17 coli coli NOUN NN Number=Sing _ _ _ _ 18 stress stress NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 stationary stationary NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 phase phase NOUN NN Number=Sing _ _ _ _ 23 sigma sigma NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 RpoS Rpos PROPN NNP Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 complementation complementation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 E. E. PROPN NNP Number=Sing _ _ _ _ 33 coli coli NOUN NN Number=Sing _ _ _ _ 34 rpoS rpos NOUN NN Number=Sing _ _ _ _ 35 mutation mutation NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 1930 # text = An open reading frame that is approximately 60% identical to the E. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 open open ADJ JJ Degree=Pos _ _ _ _ 3 reading reading NOUN NN Number=Sing _ _ _ _ 4 frame frame NOUN NN Number=Sing _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 approximately approximately ADV RB _ _ _ _ _ 8 60 60 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 % % SYM NN Number=Sing _ _ _ _ 10 identical identical ADJ JJ Degree=Pos _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 E. E. PROPN NNP Number=Sing _ _ _ _ # sent_id = 1931 # text = coli rpoS gene was identified. 1 coli coli NOUN NN Number=Sing _ _ _ _ 2 rpoS rpos NOUN NN Number=Sing _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 6 . . PUNCT . _ _ _ _ _ # sent_id = 1932 # text = Western blot analysis showed that the level of L. 1 Western western ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 level level NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 L. L. PROPN NNP Number=Sing _ _ _ _ # sent_id = 1933 # text = pneumophila 1 pneumophila pneumophila NOUN NN Number=Sing _ _ _ _ # sent_id = 1934 # text = RpoS increased in stationary phase. 1 RpoS Rpo NOUN NNS Number=Plur _ _ _ _ 2 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 stationary stationary ADJ JJ Degree=Pos _ _ _ _ 5 phase phase NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 . . PUNCT . _ _ _ _ _ # sent_id = 1935 # text = An insertion mutation was constructed in the rpoS gene on the chromosome of L. pneumophila, and the ability of this mutant strain to survive various stress conditions was assayed and compared with results for the wild-type strain. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 insertion insertion NOUN NN Number=Sing _ _ _ _ 3 mutation mutation NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 constructed construct VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 rpoS rpoS NOUN NN Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 L. L. PROPN NNP Number=Sing _ _ _ _ 15 pneumophila pneumophila PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 ability ability NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 22 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 23 strain strain NOUN NN Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 survive survive VERB VB VerbForm=Inf _ _ _ _ 26 various various ADJ JJ Degree=Pos _ _ _ _ 27 stress stress NOUN NN Number=Sing _ _ _ _ 28 conditions condition NOUN NNS Number=Plur _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 assayed assay VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 results result NOUN NNS Number=Plur _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 type type NOUN NN Number=Sing _ _ _ _ 40 strain strain NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 1936 # text = Both the mutant and wild-type strains were more resistant to stress when in stationary phase than when in the logarithmic phase of growth. 1 Both both CCONJ CC _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 type type NOUN NN Number=Sing _ _ _ _ 8 strains strains NOUN NNS Number=Plur _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 more more ADV RBR _ _ _ _ _ 11 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 stress stress VERB VB VerbForm=Inf _ _ _ _ 14 when when ADV WRB PronType=Int _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 stationary stationary ADJ JJ Degree=Pos _ _ _ _ 17 phase phase NOUN NN Number=Sing _ _ _ _ 18 than than SCONJ IN _ _ _ _ _ 19 when when ADV WRB PronType=Int _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 logarithmic logarithmic ADJ JJ Degree=Pos _ _ _ _ 23 phase phase NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 1937 # text = This finding indicates that L. pneumophila 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 finding finding NOUN NN Number=Sing _ _ _ _ 3 indicates indicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 L. L. PROPN NNP Number=Sing _ _ _ _ 6 pneumophila pneumophila NOUN NN Number=Sing _ _ _ _ # sent_id = 1938 # text = RpoS is not required for a stationary-phase-dependent resistance to stress. 1 RpoS RpoS PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 not not PART RB _ _ _ _ _ 4 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 stationary stationary NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 phase phase NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 resistance resistance NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 stress stress NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 1939 # text = Although the mutant strain was able to kill HL-60- and THP-1-derived macrophages, it could not replicate within a protozoan host, Acanthamoeba castellanii. 1 Although although SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 4 strain strain NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 able able ADJ JJ Degree=Pos _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 kill kill VERB VB VerbForm=Inf _ _ _ _ 9 HL HL NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 60 60 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 22 could could AUX MD VerbForm=Fin _ _ _ _ 23 not not PART RB _ _ _ _ _ 24 replicate replicate VERB VB VerbForm=Inf _ _ _ _ 25 within within ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 protozoan protozoan NOUN NN Number=Sing _ _ _ _ 28 host host NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 Acanthamoeba Acanthamoeba PROPN NNP Number=Sing _ _ _ _ 31 castellanii castellanii NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1940 # text = These data suggest that L. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 L. L. PROPN NNP Number=Sing _ _ _ _ # sent_id = 1941 # text = pneumophila possesses a growth phase-dependent resistance to stress that is independent of RpoS control and that RpoS likely regulates genes that enable it to survive in the environment within protozoa. 1 pneumophila pneumophila NOUN NN Number=Sing _ _ _ _ 2 possesses possess VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 growth growth NOUN NN Number=Sing _ _ _ _ 5 phase phase NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 8 resistance resistance NOUN NN Number=Sing _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 stress stress NOUN NNS Number=Plur _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 independent independent ADJ JJ Degree=Pos _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 RpoS Rpos ADJ JJ Degree=Pos _ _ _ _ 16 control control NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 RpoS RpoS PROPN NNP Number=Sing _ _ _ _ 20 likely likely ADV RB _ _ _ _ _ 21 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 genes gene NOUN NNS Number=Plur _ _ _ _ 23 that that PRON WDT PronType=Rel _ _ _ _ 24 enable enable VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 it it PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 survive survive VERB VB VerbForm=Inf _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 environment environment NOUN NN Number=Sing _ _ _ _ 31 within within ADP IN _ _ _ _ _ 32 protozoa protozoa NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1942 # text = Our data indicate that the role of rpoS in L. pneumophila is very different from what has previously been reported for E. coli rpoS. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 rpoS rpo PROPN NNP Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 L. L. PROPN NNP Number=Sing _ _ _ _ 11 pneumophila pneumophila PROPN NNP Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 very very ADV RB _ _ _ _ _ 14 different different ADJ JJ Degree=Pos _ _ _ _ 15 from from SCONJ IN _ _ _ _ _ 16 what what PRON WP PronType=Int _ _ _ _ 17 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 previously previously ADV RB _ _ _ _ _ 19 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 20 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 E. E. PROPN NNP Number=Sing _ _ _ _ 23 coli coli PROPN NNPS Number=Plur _ _ _ _ 24 rpoS. rpoS. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1943 # text = Document 00300390 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300390 00300390 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1944 # text = Modulation of CD28 expression: distinct regulatory pathways during activation and replicative senescence. 1 Modulation Modulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 CD28 CD28 NUM CD NumType=Card _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 : : PUNCT : _ _ _ _ _ 6 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 7 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 8 pathways pathway NOUN NNS Number=Plur _ _ _ _ 9 during during ADP IN _ _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 replicative replicative ADJ JJ Degree=Pos _ _ _ _ 13 senescence senescence NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1945 # text = The costimulatory molecule CD28 has a restricted tissue distribution and is expressed on T cells and some plasmacytoma cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 3 molecule molecule NOUN NN Number=Sing _ _ _ _ 4 CD28 CD28 NOUN NN Number=Sing _ _ _ _ 5 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 restricted restricted VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 tissue tissue NOUN NN Number=Sing _ _ _ _ 9 distribution distribution NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 expressed expressed VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 some some DET DT _ _ _ _ _ 18 plasmacytoma plasmacytoma NOUN NN Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 1946 # text = Although CD28 is constitutively expressed, its expression is transiently down-regulated following T cell activation and declines progressively with in vitro senescence. 1 Although although SCONJ IN _ _ _ _ _ 2 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 constitutively constitutively ADV RB _ _ _ _ _ 5 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 transiently transiently ADV RB _ _ _ _ _ 11 down down ADV RB _ _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 following follow VERB VBG VerbForm=Ger _ _ _ _ 15 T t NUM CD NumType=Card _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 declines decline NOUN NNS Number=Plur _ _ _ _ 20 progressively progressively ADV RB _ _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 vitro vitro NOUN NN Number=Sing _ _ _ _ 24 senescence senescence NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 1947 # text = In vivo, CD8+ T cells and, less frequently, CD4+ T cells may completely lose CD28 surface expression during chronic infections and with aging. 1 In in ADP IN _ _ _ _ _ 2 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 CD8 CD8 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 + + SYM SYM _ _ _ _ _ 6 T t NUM CD NumType=Card _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 less less ADV RBR Degree=Cmp _ _ _ _ 11 frequently frequently ADV RB _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 + + SYM SYM _ _ _ _ _ 15 T t NUM CD NumType=Card _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 may may AUX MD VerbForm=Fin _ _ _ _ 18 completely completely ADV RB _ _ _ _ _ 19 lose lose VERB VB VerbForm=Inf _ _ _ _ 20 CD28 CD28 NUM CD NumType=Card _ _ _ _ 21 surface surface NOUN NN Number=Sing _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 during during ADP IN _ _ _ _ _ 24 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 25 infections infection NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 with with SCONJ IN _ _ _ _ _ 28 aging ag VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1948 # text = This correlates with changes of nuclear protein-binding activities to two motifs, site alpha and beta, within the CD28 minimal promoter. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 changes change NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 protein- protein- PUNCT , _ _ _ _ SpaceAfter=No 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 activities activity NOUN NNS Number=Plur _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 two two NUM CD NumType=Card _ _ _ _ 12 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ _ 15 alpha alpha NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 within within ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 22 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 1949 # text = Both alpha- and beta-bound complexes are found only in lymphoid tissues, in CD28+ T cells, and in some transformed B cells. 1 Both both DET DT _ _ _ _ _ 2 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 bound bound ADJ JJ Degree=Pos _ _ _ _ 8 complexes complex NOUN NNS Number=Plur _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 only only ADV RB _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 14 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 CD28 CD28 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 + + SYM SYM _ _ _ _ _ 19 T t NUM CD NumType=Card _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 some some DET DT _ _ _ _ _ 25 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 B b ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1950 # text = These complexes are coordinately expressed except during replicative senescence, which is characterized by the down-modulation of site beta- but not site alpha-binding activities. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 complexes complexe NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 coordinately coordinately ADV RB _ _ _ _ _ 5 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 except except ADP IN _ _ _ _ _ 7 during during ADP IN _ _ _ _ _ 8 replicative replicative ADJ JJ Degree=Pos _ _ _ _ 9 senescence senescence NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 characterized characterize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 down down NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 modulation modulation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 site site NOUN NN Number=Sing _ _ _ _ 21 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ _ 23 but but CCONJ CC _ _ _ _ _ 24 not not PART RB _ _ _ _ _ 25 site site NOUN NN Number=Sing _ _ _ _ 26 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 binding binding VERB VBG VerbForm=Ger _ _ _ _ 29 activities activity NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1951 # text = In contrast, T cell activation induces a parallel decline in both site alpha- and beta-binding activities. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 T t NUM CD NumType=Card _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 parallel parallel ADJ JJ Degree=Pos _ _ _ _ 10 decline decline NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 both both DET DT _ _ _ _ _ 13 site site NOUN NN Number=Sing _ _ _ _ 14 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 binding binding VERB VBG VerbForm=Ger _ _ _ _ 20 activities activity NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 1952 # text = CD4+ and CD8+ 1 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 + + SYM SYM _ _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 CD8 CD8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 + + SYM NFP _ _ _ _ _ # sent_id = 1953 # text = T cells differ in their beta-binding profiles, which may explain the more pronounced down-regulation of CD28 in senescent CD8+ T cells. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 differ differ VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 6 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 profiles profile NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 may may AUX MD VerbForm=Fin _ _ _ _ 13 explain explain VERB VB VerbForm=Inf _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 more more ADV RBR _ _ _ _ _ 16 pronounced pronounced ADJ JJ Degree=Pos _ _ _ _ 17 down down NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 regulation regulation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 CD28 Cd28 NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 senescent senescent ADJ JJ Degree=Pos _ _ _ _ 24 CD8 CD8 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 + + SYM SYM _ _ _ _ _ 26 T t NUM CD NumType=Card _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1954 # text = In vivo expanded CD4+CD28null and CD8+CD28null T cells uniformly lack alpha- and beta- bound complexes, resembling the pattern seen in chronically activated cells and not of senescent cells. 1 In in ADP IN _ _ _ _ _ 2 vivo vivo ADP IN _ _ _ _ _ 3 expanded expand VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 CD4+CD28null CD4+CD28null PROPN NNP Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 CD8+CD28null CD8+CD28null PROPN NNP Number=Sing _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 uniformly uniformly ADJ JJ Degree=Pos _ _ _ _ 10 lack lack NOUN NN Number=Sing _ _ _ _ 11 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ _ 16 bound bound ADJ JJ Degree=Pos _ _ _ _ 17 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 resembling resembl VERB VBG VerbForm=Ger _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 pattern pattern NOUN NN Number=Sing _ _ _ _ 22 seen see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 chronically chronically ADV RB _ _ _ _ _ 25 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 not not PART RB _ _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 senescent senescent ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1955 # text = Document 00300393 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300393 00300393 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1956 # text = The DNA-binding properties of two heat shock factors, HSF1 and HSF3, are induced in the avian erythroblast cell line HD6. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 properties property NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 heat heat NOUN NN Number=Sing _ _ _ _ 9 shock shock NOUN NN Number=Sing _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 HSF1 HSF1 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 HSF3 HSF3 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 avian avian ADJ JJ Degree=Pos _ _ _ _ 21 erythroblast erythroblast ADJ JJ Degree=Pos _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 line line NOUN NN Number=Sing _ _ _ _ 24 HD6 Hd6 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1957 # text = Avian cells express three heat shock transcription factor (HSF) genes corresponding to a novel factor, HSF3, and homologs of mouse and human HSF1 and HSF2. 1 Avian avian ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 three three NUM CD NumType=Card _ _ _ _ 5 heat heat NOUN NN Number=Sing _ _ _ _ 6 shock shock NOUN NN Number=Sing _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 HSF HSF NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 genes gene NOUN NNS Number=Plur _ _ _ _ 13 corresponding correspond VERB VBG VerbForm=Ger _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 novel novel NOUN NN Number=Sing _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 HSF3 HSF3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 homologs homolog NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 mouse mouse NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 HSF1 Hsf1 NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 HSF2 Hsf2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 1958 # text = Analysis of the biochemical and cell biological properties of these HSFs reveals that HSF3 has properties in common with both HSF1 and HSF2 and yet has features which are distinct from both. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 cell cell VERB VB VerbForm=Inf _ _ _ _ 7 biological biological ADJ JJ Degree=Pos _ _ _ _ 8 properties property NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 HSFs HSF ADJ JJ Degree=Pos _ _ _ _ 12 reveals reveal NOUN NNS Number=Plur _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 HSF3 HSF3 VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 properties property NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 common common ADJ JJ Degree=Pos _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 both both CCONJ CC _ _ _ _ _ 21 HSF1 HSF1 NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 HSF2 HSF2 NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 yet yet CCONJ CC _ _ _ _ _ 26 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 features feature NOUN NNS Number=Plur _ _ _ _ 28 which which PRON WDT PronType=Rel _ _ _ _ 29 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 31 from from ADP IN _ _ _ _ _ 32 both both DET DT _ _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1959 # text = HSF3 is constitutively expressed in the erythroblast cell line HD6, the lymphoblast cell line MSB, and embryo fibroblasts, and yet its DNA-binding activity is induced only upon exposure of HD6 cells to heat shock. 1 HSF3 HSF3 NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 constitutively constitutively ADV RB _ _ _ _ _ 4 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 erythroblast erythroblast ADJ JJ Degree=Pos _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 line line NOUN NN Number=Sing _ _ _ _ 10 HD6 HD6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 lymphoblast lymphoblast ADJ JJ Degree=Pos _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 line line NOUN NN Number=Sing _ _ _ _ 16 MSB Msb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 embryo embryo NOUN NN Number=Sing _ _ _ _ 20 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 yet yet ADV RB _ _ _ _ _ 24 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 25 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 binding binding VERB VBG VerbForm=Ger _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 only only ADV RB _ _ _ _ _ 32 upon upon ADP IN _ _ _ _ _ 33 exposure exposure NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 HD6 HD6 NUM CD NumType=Card _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 heat heat NOUN NN Number=Sing _ _ _ _ 39 shock shock NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 1960 # text = Acquisition of HSF3 DNA-binding activity in HD6 cells is accompanied by oligomerization from a non-DNA-binding dimer to a DNA-binding trimer, whereas the effect of heat shock on HSF1 is oligomerization of an inert monomer to a DNA-binding trimer. 1 Acquisition Acquisition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HSF3 HSF3 NUM CD NumType=Card _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 HD6 HD6 NUM CD NumType=Card _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 oligomerization oligomerization NOUN NN Number=Sing _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 non-DNA non-DNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 dimer dimer NOUN NN Number=Sing _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 binding binding VERB VBG VerbForm=Ger _ _ _ _ 26 trimer trimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 whereas whereas SCONJ IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 effect effect NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 heat heat NOUN NN Number=Sing _ _ _ _ 33 shock shock NOUN NN Number=Sing _ _ _ _ 34 on on ADP IN _ _ _ _ _ 35 HSF1 HSF1 PROPN NNP Number=Sing _ _ _ _ 36 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 oligomerization oligomerization NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 inert inert ADJ JJ Degree=Pos _ _ _ _ 41 monomer monomer NOUN NN Number=Sing _ _ _ _ 42 to to ADP IN _ _ _ _ _ 43 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 44 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 binding binding VERB VBG VerbForm=Ger _ _ _ _ 47 trimer trimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 1961 # text = Induction of HSF3 DNA-binding activity is delayed compared with that of HSF1. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HSF3 HSF3 NUM CD NumType=Card _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 binding binding VERB VBG VerbForm=Ger _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 delayed delay ADJ JJ Degree=Pos _ _ _ _ 10 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 HSF1 HSF1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 1962 # text = As occurs for HSF1, heat shock leads to the translocation of HSF3 to the nucleus. 1 As as SCONJ IN _ _ _ _ _ 2 occurs occur NOUN NNS Number=Plur _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 HSF1 HSF1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 heat heat NOUN NN Number=Sing _ _ _ _ 7 shock shock NOUN NN Number=Sing _ _ _ _ 8 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 translocation translocation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 HSF3 HSF3 NUM CD NumType=Card _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 1963 # text = HSF exhibits the properties of a transcriptional activator, as judged from the stimulatory activity of transiently overexpressed HSF3 measured by using a heat shock element-containing reporter construct and as independently assayed by the activity of a chimeric GAL4-HSF3 protein on a GAL4 reporter construct. 1 HSF HSF PRON PRP Case=Acc|Number=Sing|Person=1|PronType=Prs|Reflex=Yes _ _ _ _ 2 exhibits exhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 properties property NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 8 activator activator NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 as as SCONJ IN _ _ _ _ _ 11 judged judge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 stimulatory stimulatory ADJ JJ Degree=Pos _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 transiently transiently ADV RB _ _ _ _ _ 18 overexpressed overexpress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 HSF3 HSF3 NUM CD NumType=Card _ _ _ _ 20 measured measure VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by SCONJ IN _ _ _ _ _ 22 using use VERB VBG VerbForm=Ger _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 heat heat NOUN NN Number=Sing _ _ _ _ 25 shock shock NOUN NN Number=Sing _ _ _ _ 26 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 containing contain VERB VBG VerbForm=Ger _ _ _ _ 29 reporter reporter NOUN NN Number=Sing _ _ _ _ 30 construct construct NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 as as SCONJ IN _ _ _ _ _ 33 independently independently ADV RB _ _ _ _ _ 34 assayed assay VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 activity activity NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 chimeric chimeric ADJ JJ Degree=Pos _ _ _ _ 41 GAL4 Gal4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 HSF3 HSF3 NOUN NN Number=Sing _ _ _ _ 44 protein protein NOUN NN Number=Sing _ _ _ _ 45 on on ADP IN _ _ _ _ _ 46 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 47 GAL4 GAL4 PROPN NNP Number=Sing _ _ _ _ 48 reporter reporter NOUN NN Number=Sing _ _ _ _ 49 construct construct NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 1964 # text = These results reveal that HSF3 is negatively regulated in avian cells and acquires DNA-binding activity in certain cells upon heat shock. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 reveal reveal ADJ JJ Degree=Pos _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 HSF3 HSF3 NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 negatively negatively ADV RB _ _ _ _ _ 8 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 avian avian ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 acquires acquire NOUN NNS Number=Plur _ _ _ _ 14 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 certain certain ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 upon upon ADP IN _ _ _ _ _ 22 heat heat NOUN NN Number=Sing _ _ _ _ 23 shock shock NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1965 # text = Document 00300399 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300399 00300399 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1966 # text = Increased glucocorticoid receptor beta in airway cells of glucocorticoid-insensitive asthma. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 3 receptor receptor NOUN NN Number=Sing _ _ _ _ 4 beta beta NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 airway airway ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 insensitive insensitive ADJ JJ Degree=Pos _ _ _ _ 12 asthma asthma NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1967 # text = Glucocorticoid (GC)-insensitive asthma is a challenging clinical problem that can be associated with life-threatening disease progression. 1 Glucocorticoid Glucocorticoid PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 GC GC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 5 - - PUNCT : _ _ _ _ SpaceAfter=No 6 insensitive insensitive ADJ JJ Degree=Pos _ _ _ _ 7 asthma asthma NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 challenging challenging ADJ JJ Degree=Pos _ _ _ _ 11 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 12 problem problem NOUN NN Number=Sing _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 can can AUX MD VerbForm=Fin _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 life life NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 threatening threaten VERB VBG VerbForm=Ger _ _ _ _ 21 disease disease NOUN NN Number=Sing _ _ _ _ 22 progression progression NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 1968 # text = The molecular basis of GC insensitivity is unknown. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 3 basis basis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 GC GC NOUN NN Number=Sing _ _ _ _ 6 insensitivity insensitivity NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 1969 # text = Alternative splicing of the GC receptor (GCR) pre-mRNA generates a second GCR, termed GCRbeta, which does not bind GC but antagonizes the transactivating activity of the classic GCR. 1 Alternative alternative ADJ JJ Degree=Pos _ _ _ _ 2 splicing splicing NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 GC GC PROPN NNP Number=Sing _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 GCR GCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 pre-mRNA pre-mRNa PROPN NNP Number=Sing _ _ _ _ 11 generates generate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 14 GCR Gcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 GCRbeta GCRbeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 bind bind VERB VB VerbForm=Inf _ _ _ _ 23 GC GC PROPN NNP Number=Sing _ _ _ _ 24 but but CCONJ CC _ _ _ _ _ 25 antagonizes antagonize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 transactivating transactivat VERB VBG VerbForm=Ger _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 classic classic ADJ JJ Degree=Pos _ _ _ _ 32 GCR Gcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1970 # text = Thus increased expression of GCRbeta could account for glucocorticoid insensitivity. 1 Thus thus ADV RB _ _ _ _ _ 2 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 GCRbeta GCRbeta PROPN NNP Number=Sing _ _ _ _ 6 could could AUX MD VerbForm=Fin _ _ _ _ 7 account account VERB VB VerbForm=Inf _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 10 insensitivity insensitivity NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 1971 # text = Bronchoalveolar lavage (BAL) cells and peripheral blood mononuclear cells (PBMC) were examined for GCRbeta immunoreactivity using a GCRbeta-specific antibody by immunohistochemical staining. 1 Bronchoalveolar Bronchoalveolar ADJ JJ Degree=Pos _ _ _ _ 2 lavage lavage NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 BAL Bal NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 9 blood blood NOUN NN Number=Sing _ _ _ _ 10 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 PBMC PBMC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 GCRbeta GCRbeta PROPN NNP Number=Sing _ _ _ _ 19 immunoreactivity immunoreactivity NOUN NN Number=Sing _ _ _ _ 20 using use VERB VBG VerbForm=Ger _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 GCRbeta GCRbeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 antibody antibody NOUN NN Number=Sing _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 immunohistochemical immunohistochemical ADJ JJ Degree=Pos _ _ _ _ 28 staining staining NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 1972 # text = Cell localization of GCRbeta expression was performed using a double immunostaining technique. 1 Cell cell NOUN NN Number=Sing _ _ _ _ 2 localization localization NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 GCRbeta GCRbeta PROPN NNP Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 performed perform VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 using use VERB VBG VerbForm=Ger _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 double double NOUN NN Number=Sing _ _ _ _ 11 immunostaining immunostain VERB VBG VerbForm=Ger _ _ _ _ 12 technique technique NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 1973 # text = Patients with GC-insensitive asthma expressed a significantly higher number of GCRbeta-immunoreactive cells in their BAL and peripheral blood than GC-sensitive asthmatics or normal control subjects. 1 Patients patient NOUN NNS Number=Plur _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 GC GC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 insensitive insensitive ADJ JJ Degree=Pos _ _ _ _ 6 asthma asthma NOUN NN Number=Sing _ _ _ _ 7 expressed express VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 significantly significantly ADV RB _ _ _ _ _ 10 higher higher ADJ JJR Degree=Cmp _ _ _ _ 11 number number NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 GCRbeta GCRbeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 immunoreactive immunoreactive ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 BAL Bal NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 22 blood blood NOUN NN Number=Sing _ _ _ _ 23 than than ADP IN _ _ _ _ _ 24 GC GC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 27 asthmatics asthmatic NOUN NNS Number=Plur _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 normal normal ADJ JJ Degree=Pos _ _ _ _ 30 control control NOUN NN Number=Sing _ _ _ _ 31 subjects subject NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 1974 # text = Furthermore, GCRbeta expression in GC-insensitive asthma was particularly high in airway T cells, which are thought to play a major role in the pathogenesis of asthma. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 GCRbeta GCRbeta PROPN NNP Number=Sing _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 GC GC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 insensitive insensitive ADJ JJ Degree=Pos _ _ _ _ 9 asthma asthma NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 particularly particularly ADV RB _ _ _ _ _ 12 high high ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 airway airway ADJ JJ Degree=Pos _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 play play VERB VB VerbForm=Inf _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 major major ADJ JJ Degree=Pos _ _ _ _ 25 role role NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 asthma asthma NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 1975 # text = We also examined the expression of GCRbeta in specimens from the airways of patients with chronic bronchitis. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 GCRbeta GCRbeta PROPN NNP Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 specimens specimen NOUN NNS Number=Plur _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 airways airway NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 patients patient NOUN NN Number=Sing _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 17 bronchitis bronchitis NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1976 # text = In chronic bronchitis, few cells were GCRbeta-positive and their numbers did not differ significantly from normal control subjects. 1 In in ADP IN _ _ _ _ _ 2 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 3 bronchitis bronchitis NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 few few ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 GCRbeta GCRbeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 positive positive ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 numbers number NOUN NNS Number=Plur _ _ _ _ 14 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 differ differ VERB VB VerbForm=Inf _ _ _ _ 17 significantly significantly ADV RB _ _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 normal normal ADJ JJ Degree=Pos _ _ _ _ 20 control control NOUN NN Number=Sing _ _ _ _ 21 subjects subject NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 1977 # text = We conclude that GC-insensitive asthma is associated with increased expression of GCRbeta in airway T cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 GC GC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 insensitive insensitive ADJ JJ Degree=Pos _ _ _ _ 7 asthma asthma NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 GCRbeta GCRbeta PROPN NNP Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 airway airway PROPN NNP Number=Sing _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1978 # text = Document 003003106 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003106 003003106 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1979 # text = Tyrphostin AG-490 inhibits cytokine-mediated JAK3/STAT5a/b signal transduction and cellular proliferation of antigen-activated human T cells. 1 Tyrphostin Tyrphostin VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 AG AG ADV RB _ _ _ _ SpaceAfter=No 3 - - SYM SYM _ _ _ _ SpaceAfter=No 4 490 490 NUM CD NumType=Card _ _ _ _ 5 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 6 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 JAK3/STAT5 JAK3/STAT5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 a a DET DT Definite=Ind|PronType=Art _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 b benefit NOUN NN Number=Sing _ _ _ _ 13 signal signal NOUN NN Number=Sing _ _ _ _ 14 transduction transduction NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 17 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 antigen antigen ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1980 # text = Janus kinase 3 (JAK3) is a cytoplasmic tyrosine kinase required for T cell development and activated by cytokines that utilize the interleukin-2 (IL-2) receptor common gamma chain (gamma(c)). 1 Janus Janus PROPN NNP Number=Sing _ _ _ _ 2 kinase kinase NOUN NN Number=Sing _ _ _ _ 3 3 3 NUM CD NumType=Card _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 JAK3 JAK3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 10 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 development development NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 21 that that PRON WDT PronType=Rel _ _ _ _ 22 utilize utilize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 receptor receptor NOUN NN Number=Sing _ _ _ _ 33 common common ADJ JJ Degree=Pos _ _ _ _ 34 gamma gamma NOUN NN Number=Sing _ _ _ _ 35 chain chain NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 1981 # text = Genetic inactivation of JAK3 is manifested as severe combined immunodeficiency disease (SCID) in humans and mice. 1 Genetic genetic ADJ JJ Degree=Pos _ _ _ _ 2 inactivation inactivation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 JAK3 JAK3 NUM CD NumType=Card _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 manifested manifest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 severe severe ADJ JJ Degree=Pos _ _ _ _ 9 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 11 disease disease NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 SCID SCID PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 humans human NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1982 # text = These findings have suggested that JAK3 represents a pharmacological target to control certain lymphoid-derived diseases. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 suggested suggest VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 JAK3 JAK3 NOUN NN Number=Sing _ _ _ _ 7 represents represent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 pharmacological pharmacological ADJ JJ Degree=Pos _ _ _ _ 10 target target NOUN NN Number=Sing _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 control control VERB VB VerbForm=Inf _ _ _ _ 13 certain certain ADJ JJ Degree=Pos _ _ _ _ 14 lymphoid lymphoid NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 1983 # text = Here we provide novel evidence that AG-490 potently inhibits the autokinase activity of JAK3 and tyrosine phosphorylation and DNA binding of signal transducer and activator of transcription 5a and 5b (STAT5a/b). 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 novel novel ADJ JJ Degree=Pos _ _ _ _ 5 evidence evidence NOUN NN Number=Sing _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 AG AG VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 8 - - SYM SYM _ _ _ _ SpaceAfter=No 9 490 490 NUM CD NumType=Card _ _ _ _ 10 potently potently ADV RB _ _ _ _ _ 11 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 autokinase autokinase ADJ JJ Degree=Pos _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 JAK3 JAK3 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 19 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 DNA dna NOUN NN Number=Sing _ _ _ _ 22 binding binding VERB VBG VerbForm=Ger _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 signal signal NOUN NN Number=Sing _ _ _ _ 25 transducer transducer NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 activator activator NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 b b NOUN NN Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 STAT5 STAT5 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 a a DET DT Definite=Ind|PronType=Art _ _ _ SpaceAfter=No 38 / / PUNCT , _ _ _ _ SpaceAfter=No 39 b b NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 1984 # text = Similar inhibitory effects were observed with other cytokines that use gamma(c). 1 Similar similar ADJ JJ Degree=Pos _ _ _ _ 2 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 3 effects effect NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 other other ADJ JJ Degree=Pos _ _ _ _ 8 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 use use VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 1985 # text = AG-490 also inhibited IL-2-mediated proliferative growth in human T cells with an IC50) = 25 microM that was partially recoverable. 1 AG ag INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 490 490 NUM CD NumType=Card _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 12 growth growth NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 IC50 IC50 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 = = SYM SYM _ _ _ _ _ 22 25 25 NUM CD NumType=Card _ _ _ _ 23 microM microm NOUN NN Number=Sing _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 26 partially partially ADV RB _ _ _ _ _ 27 recoverable recoverable ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1986 # text = Moreover, we demonstrate that this inhibitor prevented tetanus toxoid antigen-specific T cell proliferation and expansion but failed to block activation of Zap70 or p56Lck after anti-CD3 stimulation of human T cells. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 8 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 tetanus tetanus ADP IN _ _ _ _ _ 10 toxoid toxoid ADJ JJ Degree=Pos _ _ _ _ 11 antigen-specific antigen-specific ADJ JJ Degree=Pos _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 expansion expansion NOUN NN Number=Sing _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 block block VERB VB VerbForm=Inf _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 Zap70 Zap70 PROPN NNP Number=Sing _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 p56Lck p56Lck PROPN NNP Number=Sing _ _ _ _ 26 after after ADP IN _ _ _ _ _ 27 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 28 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 1987 # text = Taken together, these findings suggest that AG-490 inhibits the JAK3-mediated Type II signaling pathway but not the T cell receptor-derived Type I pathway and possesses therapeutic potential for T cell-derived pathologies such as graft-versus-host disease, allergy, and autoimmune disorders. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 findings finding NOUN NNS Number=Plur _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 AG AG NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 490 490 NUM CD NumType=Card _ _ _ _ 11 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 JAK3 JAK3 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 Type type NOUN NN Number=Sing _ _ _ _ 17 II ii NUM CD NumType=Card _ _ _ _ 18 signaling signal NOUN NN Number=Sing _ _ _ _ 19 pathway pathway NOUN NN Number=Sing _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 T T PROPN NNP Number=Sing _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 derived derived VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 Type type NOUN NN Number=Sing _ _ _ _ 29 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 30 pathway pathway NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 possesses possess NOUN NNS Number=Plur _ _ _ _ 33 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 34 potential potential NOUN NN Number=Sing _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 T t PROPN NNP Number=Sing _ _ _ _ 37 cell cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 pathologies pathology NOUN NNS Number=Plur _ _ _ _ 41 such such ADJ JJ Degree=Pos _ _ _ _ 42 as as ADP IN _ _ _ _ _ 43 graft graft NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 versus versus NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 host host NOUN NN Number=Sing _ _ _ _ 48 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 allergy allergy NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 , , PUNCT , _ _ _ _ _ 52 and and CCONJ CC _ _ _ _ _ 53 autoimmune autoimmune ADJ JJ Degree=Pos _ _ _ _ 54 disorders disorder NOUN NNS Number=Plur _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1988 # text = Document 003003107 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003107 003003107 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1989 # text = Inhibition of T cell activation by the extracellular matrix protein tenascin. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 9 matrix matrix NOUN NN Number=Sing _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 tenascin tenascin NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1990 # text = Tenascin (TN) is an extracellular matrix protein that is expressed widely in the fetus and sparingly in the adult, but reappears at high levels in certain areas of tissue insult such as tumor matrices and sites of wound healing. 1 Tenascin Tenascin PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 TN TN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 8 matrix matrix NOUN NN Number=Sing _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 widely widely ADV RB _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 fetus fetus NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 sparingly sparingly ADV RB _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 adult adult NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 but but CCONJ CC _ _ _ _ _ 24 reappears reappear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 at at ADP IN _ _ _ _ _ 26 high high ADJ JJ Degree=Pos _ _ _ _ 27 levels level NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 certain certain ADJ JJ Degree=Pos _ _ _ _ 30 areas area NOUN NNS Number=Plur _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 tissue tissue NOUN NN Number=Sing _ _ _ _ 33 insult insult NOUN NN Number=Sing _ _ _ _ 34 such such ADJ JJ Degree=Pos _ _ _ _ 35 as as ADP IN _ _ _ _ _ 36 tumor tumor NOUN NN Number=Sing _ _ _ _ 37 matrices matrice NOUN NNS Number=Plur _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 sites site NOUN NNS Number=Plur _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 wound wound ADJ JJ Degree=Pos _ _ _ _ 42 healing healing NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 1991 # text = We show here that soluble TN inhibits proliferation of human T cells in response to alpha CD3 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 6 TN Tn NOUN NN Number=Sing _ _ _ _ 7 inhibits inhibits NOUN NNS Number=Plur _ _ _ _ 8 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 response response NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 CD3 CD3 NOUN NN Number=Sing _ _ _ _ # sent_id = 1992 # text = Ab co-immobilized with the extracellular matrix protein fibronectin (FN). 1 Ab Ab PROPN NNP Number=Sing _ _ _ _ 2 co-immobilized co-immobilize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 6 matrix matrix NOUN NN Number=Sing _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 fibronectin fibronectin NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 FN FN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 1993 # text = TN also inhibits proliferation driven by alpha CD3/IL-2 or by phorbol ester/IL-2, and it prevents high level induction of IL-2R. 1 TN rn PROPN NNP Number=Sing _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 5 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 CD3/IL Cd3/il NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 14 ester/IL ester/il NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 20 prevents prevent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 high high ADJ JJ Degree=Pos _ _ _ _ 22 level level NOUN NN Number=Sing _ _ _ _ 23 induction induction NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2R 2R PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 1994 # text = The presence of TN in culture medium does not detectably alter the pattern of tyrosine phosphorylation resulting from T cell triggering with alpha CD3, but at later time points prevents the appearance of functional NF-AT1 transcription factor complexes in T cell nuclear extracts. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 presence presence NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 TN rn PROPN NNP Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 culture culture NOUN NN Number=Sing _ _ _ _ 7 medium medium NOUN NN Number=Sing _ _ _ _ 8 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 detectably detectably ADV RB _ _ _ _ _ 11 alter alter VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 pattern pattern NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 16 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 17 resulting result VERB VBG VerbForm=Ger _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 T T PROPN NNP Number=Sing _ _ _ _ 20 cell cell PROPN NNP Number=Sing _ _ _ _ 21 triggering trigger VERB VBG VerbForm=Ger _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 but but CCONJ CC _ _ _ _ _ 27 at at ADP IN _ _ _ _ _ 28 later later ADJ JJR Degree=Cmp _ _ _ _ 29 time time NOUN NN Number=Sing _ _ _ _ 30 points point NOUN NNS Number=Plur _ _ _ _ 31 prevents prevent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 appearance appearance NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 functional functional ADJ JJ Degree=Pos _ _ _ _ 36 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 AT1 AT1 PROPN NNP Number=Sing _ _ _ _ 39 transcription transcription NOUN NN Number=Sing _ _ _ _ 40 factor factor NOUN NN Number=Sing _ _ _ _ 41 complexes complex NOUN NNS Number=Plur _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 T t PROPN NNP Number=Sing _ _ _ _ 44 cell cell PROPN NNP Number=Sing _ _ _ _ 45 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 46 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 1995 # text = These findings are consistent with the postulated role for TN as a natural antagonist to FN action, and suggest that T cell responses occurring at tissue sites in which TN is expressed could be influenced by its presence. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 postulated postulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 TN TN PROPN NNP Number=Sing _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 natural natural ADJ JJ Degree=Pos _ _ _ _ 14 antagonist antagonist NOUN NN Number=Sing _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 FN Fn VERB VB VerbForm=Inf _ _ _ _ 17 action action NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 responses response NOUN NNS Number=Plur _ _ _ _ 25 occurring occurre VERB VBG VerbForm=Ger _ _ _ _ 26 at at ADP IN _ _ _ _ _ 27 tissue tissue NOUN NN Number=Sing _ _ _ _ 28 sites site NOUN NNS Number=Plur _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 which which PRON WDT PronType=Rel _ _ _ _ 31 TN TN PROPN NNP Number=Sing _ _ _ _ 32 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 34 could could AUX MD VerbForm=Fin _ _ _ _ 35 be be AUX VB VerbForm=Inf _ _ _ _ 36 influenced influence VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 by by ADP IN _ _ _ _ _ 38 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 39 presence presence NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 1996 # text = Document 003003108 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003108 003003108 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 1997 # text = CBP/p300 integrates Raf/Rac-signaling pathways in the transcriptional induction of NF-ATc during T cell activation. 1 CBP CBp SYM NFP _ _ _ _ SpaceAfter=No 2 / / SYM SYM _ _ _ _ SpaceAfter=No 3 p300 p300 NUM CD NumType=Card _ _ _ _ 4 integrates integrate NOUN NNS Number=Plur _ _ _ _ 5 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 / / PUNCT , _ _ _ _ SpaceAfter=No 7 Rac rac PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 10 pathways pathway NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 14 induction induction NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 ATc ATc PROPN NNP Number=Sing _ _ _ _ 19 during during ADP IN _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 1998 # text = NF-ATc, an inducibly expressed transcription factor, controls gene expression in T lymphocytes and cardiomyocytes. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 ATc ATc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 inducibly inducibly ADV RB _ _ _ _ _ 7 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 controls control VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 gene gene ADJ JJ Degree=Pos _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 cardiomyocytes cardiomyocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 1999 # text = We show here that the transcriptional co-activators CBP/p300 bind to and control the activity of the inducible N-terminal transactivation domain of NF-ATc, TAD-A. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 co-activators co-activator NOUN NNS Number=Plur _ _ _ _ 8 CBP Cbp NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 / / PUNCT , _ _ _ _ SpaceAfter=No 10 p300 p300 NUM CD NumType=Card _ _ _ _ 11 bind bind NOUN NN Number=Sing _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 control control VERB VB VerbForm=Inf _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 20 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 terminal terminal NOUN NN Number=Sing _ _ _ _ 22 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 23 domain domain NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 ATc ATc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 TAD TAD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 A A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2000 # text = Similar to the N terminal transactivation domain of c-Jun, TAD-A is inducibly phosphorylated, but this phosphorylation is dispensable for the interaction with CBP/p300. 1 Similar similar ADJ JJ Degree=Pos _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 N N PROPN NNP Number=Sing _ _ _ _ 5 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 6 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 7 domain domain NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 TAD TAD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 A a PROPN NNP Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 inducibly inducibly ADV RB _ _ _ _ _ 18 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 22 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 dispensable dispensable ADJ JJ Degree=Pos _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 interaction interaction NOUN NN Number=Sing _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 CBP CBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 / / PUNCT , _ _ _ _ SpaceAfter=No 31 p300 p300 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2001 # text = Constitutive active versions of c-Raf and Rac synergistically enhance the CBP/p300-mediated increase of TAD-A activity, indicating the important role CBP/p300 plays in the integration of T cell activation signals. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 active active ADJ JJ Degree=Pos _ _ _ _ 3 versions version NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 Raf Raf PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 Rac rac PROPN NNP Number=Sing _ _ _ _ 10 synergistically synergistically ADV RB _ _ _ _ _ 11 enhance enhance VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 CBP CBP NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 p300 p300 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 increase increase NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 TAD TAD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 important important ADJ JJ Degree=Pos _ _ _ _ 28 role role NOUN NN Number=Sing _ _ _ _ 29 CBP Cbp NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 / / PUNCT , _ _ _ _ SpaceAfter=No 31 p300 p300 NUM CD NumType=Card _ _ _ _ 32 plays play NOUN NNS Number=Plur _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 integration integration NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 T t PROPN NNP Number=Sing _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 activation activation NOUN NN Number=Sing _ _ _ _ 40 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 2002 # text = Since a mutation of CBP abolishing HAT activity is almost as active as wild-type CBP in T cells, functions of CBP/p300 other than histone acetylation appear to control the NF-AT-dependent transcription in T cells. 1 Since since ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 mutation mutation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 CBP CBP PROPN NNP Number=Sing _ _ _ _ 6 abolishing abolish VERB VBG VerbForm=Ger _ _ _ _ 7 HAT hat DET WDT PronType=Int _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 almost almost ADV RB _ _ _ _ _ 11 as as ADV RB _ _ _ _ _ 12 active active ADJ JJ Degree=Pos _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 type type NOUN NN Number=Sing _ _ _ _ 17 CBP Cbp NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 functions function NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 CBP CBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 / / PUNCT , _ _ _ _ SpaceAfter=No 26 p300 p300 NUM CD NumType=Card _ _ _ _ 27 other other ADJ JJ Degree=Pos _ _ _ _ 28 than than ADP IN _ _ _ _ _ 29 histone histone PRON NN Number=Sing _ _ _ _ 30 acetylation acetylation NOUN NN Number=Sing|Typo=Yes _ _ _ _ 31 appear appear VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 32 to to PART TO _ _ _ _ _ 33 control control VERB VB VerbForm=Inf _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 AT AT ADV RB _ _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 40 transcription transcription NOUN NN Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 T t PROPN NNP Number=Sing _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2003 # text = Document 003003114 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003114 003003114 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2004 # text = Bik, a novel death-inducing protein shares a distinct sequence motif with Bcl-2 family proteins and interacts with viral and cellular survival-promoting proteins. 1 Bik Bik PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 novel novel NOUN NN Number=Sing _ _ _ _ 5 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 shares share NOUN NNS Number=Plur _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 12 sequence sequence NOUN NN Number=Sing _ _ _ _ 13 motif motif NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 family family NOUN NN Number=Sing _ _ _ _ 19 proteins protein NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 interacts interacts NOUN NNS Number=Plur _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 viral viral ADJ JJ Degree=Pos _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 cellular celular ADJ JJ Degree=Pos _ _ _ _ 26 survival survival NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 promoting promoting VERB VBG VerbForm=Ger _ _ _ _ 29 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2005 # text = The survival-promoting activity of the Bcl-2 family of proteins appears to be modulated by interactions between various cellular proteins. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 survival survival NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 promoting promote VERB VBG VerbForm=Ger _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 family family NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 proteins protein NOUN NNS Number=Plur _ _ _ _ 14 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 be be AUX VB VerbForm=Inf _ _ _ _ 17 modulated modulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 interactions interaction NOUN NNS Number=Plur _ _ _ _ 20 between between ADP IN _ _ _ _ _ 21 various various ADJ JJ Degree=Pos _ _ _ _ 22 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 23 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2006 # text = We have identified a novel cellular protein, Bik, that interacts with the cellular survival-promoting proteins, Bcl-2 and Bcl-xL, as well as the viral survival-promoting proteins, Epstein Barr virus-BHRF1 and adenovirus E1B-19 kDa. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 novel novel NOUN NN Number=Sing _ _ _ _ 6 cellular celular ADJ JJ Degree=Pos _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 Bik Bik PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 interacts interact VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 16 survival survival NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 promoting promoting VERB VBG VerbForm=Ger _ _ _ _ 19 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 xL xl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 as as ADV RB _ _ _ _ _ 30 well well ADV RB Degree=Pos _ _ _ _ 31 as as ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 viral viral ADJ JJ Degree=Pos _ _ _ _ 34 survival survival NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 promoting promoting VERB VBG VerbForm=Ger _ _ _ _ 37 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 Epstein Epstein PROPN NNP Number=Sing _ _ _ _ 40 Barr Barr PROPN NNP Number=Sing _ _ _ _ 41 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 BHRF1 Bhrf1 NOUN NN Number=Sing _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 adenovirus adenovirus NOUN NN Number=Sing _ _ _ _ 46 E1B E1b NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 19 19 NUM CD NumType=Card _ _ _ _ 49 kDa kDa NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 2007 # text = In transient transfection assays, Bik promotes cell death in a manner similar to the death-promoting members of the Bcl-2 family, Bax and Bak. 1 In in ADP IN _ _ _ _ _ 2 transient transient ADJ JJ Degree=Pos _ _ _ _ 3 transfection transfection NOUN NN Number=Sing _ _ _ _ 4 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 Bik Bik PROPN NNP Number=Sing _ _ _ _ 7 promotes promote VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 death death NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 manner manner NOUN NN Number=Sing _ _ _ _ 13 similar similar ADJ JJ Degree=Pos _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 promoting promote VERB VBG VerbForm=Ger _ _ _ _ 19 members member NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 Bax Bax PROPN NNP Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 Bak Bak PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2008 # text = This death-promoting activity of Bik can be suppressed by coexpression of Bcl-2, Bcl-XL, EBV-BHRF1 and E1B-19 kDa proteins suggesting that Bik may be a common target for both cellular and viral anti-apoptotic proteins. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 promoting promote VERB VBG VerbForm=Ger _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Bik Bik PROPN NNP Number=Sing _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 coexpression coexpression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 -2 -2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 -XL -XL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 BHRF1 BHRF1 PROPN NNP Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 E1B E1B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 19 19 NUM CD NumType=Card _ _ _ _ 27 kDa kDa NOUN NN Number=Sing _ _ _ _ 28 proteins protein NOUN NNS Number=Plur _ _ _ _ 29 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 30 that that SCONJ IN _ _ _ _ _ 31 Bik Bik PROPN NNP Number=Sing _ _ _ _ 32 may may AUX MD VerbForm=Fin _ _ _ _ 33 be be AUX VB VerbForm=Inf _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 common common ADJ JJ Degree=Pos _ _ _ _ 36 target target NOUN NN Number=Sing _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 both both CCONJ CC _ _ _ _ _ 39 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 viral viral ADJ JJ Degree=Pos _ _ _ _ 42 anti-apoptotic anti-apoptotic ADJ JJ Degree=Pos _ _ _ _ 43 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 2009 # text = While Bik does not show overt homology to the BH1 and BH2 conserved domains characteristic of the Bcl-2 family, it does share a 9 amino acid domain (BH3) with Bax and Bak which may be a critical determinant for the death-promoting activity of these proteins. 1 While while SCONJ IN _ _ _ _ _ 2 Bik Bik PROPN NNP Number=Sing _ _ _ _ 3 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 show show VERB VB VerbForm=Inf _ _ _ _ 6 overt over ADP IN Typo=Yes _ _ _ _ 7 homology homology NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 BH1 Bh1 NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 BH2 Bh2 NOUN NN Number=Sing _ _ _ _ 13 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 domains domain NOUN NNS Number=Plur _ _ _ _ 15 characteristic characteristic NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 24 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 share share VERB VB VerbForm=Inf _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 9 9 NUM CD NumType=Card _ _ _ _ 28 amino amino NOUN NN Number=Sing _ _ _ _ 29 acid acid NOUN NN Number=Sing _ _ _ _ 30 domain domain NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 BH3 BH3 X LS _ _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 Bax Bax PROPN NNP Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 Bak Bak PROPN NNP Number=Sing _ _ _ _ 38 which which PRON WDT PronType=Rel _ _ _ _ 39 may may AUX MD VerbForm=Fin _ _ _ _ 40 be be AUX VB VerbForm=Inf _ _ _ _ 41 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 critical critical ADJ JJ Degree=Pos _ _ _ _ 43 determinant determinant NOUN NN Number=Sing _ _ _ _ 44 for for ADP IN _ _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 promoting promote VERB VBG VerbForm=Ger _ _ _ _ 49 activity activity NOUN NN Number=Sing _ _ _ _ 50 of of ADP IN _ _ _ _ _ 51 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 52 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2010 # text = Document 003003117 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003117 003003117 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2011 # text = Cell type- and stage-specific expression of the CD20/B1 antigen correlates with the activity of a diverged octamer DNA motif present in its promoter. 1 Cell cell NOUN NN Number=Sing _ _ _ _ 2 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 stage stage NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 CD20/B1 CD20/B1 PROPN NNP Number=Sing _ _ _ _ 12 antigen antigen NOUN NN Number=Sing _ _ _ _ 13 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 diverged diverge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 octamer octamer NOUN NN Number=Sing _ _ _ _ 21 DNA dna NOUN NN Number=Sing _ _ _ _ 22 motif motif NOUN NN Number=Sing _ _ _ _ 23 present present ADJ JJ Degree=Pos _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 26 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2012 # text = The CD20(B1) gene encodes a B cell-specific protein involved in the regulation of human B cell proliferation and differentiation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 CD20 CD20 NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 B1 B1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 regulation regulation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2013 # text = Studies with 5' deletion CD20 promoter-CAT constructs have previously revealed two regions of the promoter between bases -186 and -280 and between bases -280 and -454 which contained positive regulatory elements. 1 Studies study NOUN NNS Number=Plur _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 ' 's PUNCT `` _ _ _ _ _ 5 deletion deletion NOUN NN Number=Sing _ _ _ _ 6 CD20 CD20 NUM CD NumType=Card _ _ _ _ 7 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 CAT Cat NOUN NN Number=Sing _ _ _ _ 10 constructs construct NOUN NNS Number=Plur _ _ _ _ 11 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 previously previously ADV RB _ _ _ _ _ 13 revealed reveale VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 two two NUM CD NumType=Card _ _ _ _ 15 regions region NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ _ 19 between between ADP IN _ _ _ _ _ 20 bases bas NOUN NNS Number=Plur _ _ _ _ 21 -186 -186 NUM CD NumType=Card _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 - - SYM SYM _ _ _ _ SpaceAfter=No 24 280 280 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 between between ADP IN _ _ _ _ _ 27 bases bas NOUN NNS Number=Plur _ _ _ _ 28 -280 -280 NUM CD NumType=Card _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 - - SYM SYM _ _ _ _ SpaceAfter=No 31 454 454 NUM CD NumType=Card _ _ _ _ 32 which which PRON WDT PronType=Rel _ _ _ _ 33 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 positive positive ADJ JJ Degree=Pos _ _ _ _ 35 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 36 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 2014 # text = In this study we identified a sequence element present in the most proximal region located between bases -214 and -201, TTCTTCTAATTAA, which is important in the high constitutive expression of CD20 in mature B cells and the induction of CD20 in pre-B cells. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 sequence sequence NOUN NN Number=Sing _ _ _ _ 8 element element NOUN NN Number=Sing _ _ _ _ 9 present present VERB VB VerbForm=Inf _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 most most ADV RBS _ _ _ _ _ 13 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 14 region region NOUN NN Number=Sing _ _ _ _ 15 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 between between ADP IN _ _ _ _ _ 17 bases bas NOUN NNS Number=Plur _ _ _ _ 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 214 214 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 - - SYM SYM _ _ _ _ SpaceAfter=No 22 201 201 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 TTCTTCTAATTAA TTCTTCTAATTAa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 which which PRON WDT PronType=Rel _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 important important ADJ JJ Degree=Pos _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 high high ADJ JJ Degree=Pos _ _ _ _ 32 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 33 expression expression NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 CD20 CD20 PROPN NNP Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 mature mature ADJ JJ Degree=Pos _ _ _ _ 38 B b ADJ JJ Degree=Pos _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 induction induction NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 CD20 CD20 PROPN NNP Number=Sing _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 pre pre X AFX _ _ _ _ SpaceAfter=No 47 -B -b ADJ JJ Degree=Pos _ _ _ _ 48 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 2015 # text = This sequence element was referred to as the BAT box and its deletion significantly reduced the activity of a CD20 promoter-CAT construct in B cells. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 sequence sequence NOUN NN Number=Sing _ _ _ _ 3 element element NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 referred refer VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 BAT bat NOUN NN Number=Sing _ _ _ _ 10 box box NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 deletion deletion NOUN NN Number=Sing _ _ _ _ 14 significantly significantly ADV RB _ _ _ _ _ 15 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 CD20 CD20 PROPN NNP Number=Sing _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 CAT cat NOUN NN Number=Sing _ _ _ _ 24 construct construct NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 B b ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2016 # text = Mobility shift assays with various mutant probes and B cell nuclear extracts demonstrated that the core sequence TAAT was essential for binding to this site. 1 Mobility Mobility NOUN NN Number=Sing _ _ _ _ 2 shift shift NOUN NN Number=Sing _ _ _ _ 3 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 various various ADJ JJ Degree=Pos _ _ _ _ 6 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 7 probes probe NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 B b ADJ JJ Degree=Pos _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 extracts extract NOUN NNS Number=Plur _ _ _ _ 13 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 core core NOUN NN Number=Sing _ _ _ _ 17 sequence sequence NOUN NN Number=Sing _ _ _ _ 18 TAAT Taat PRON WDT PronType=Rel _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 essential essential ADJ JJ Degree=Pos _ _ _ _ 21 for for SCONJ IN _ _ _ _ _ 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 25 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2017 # text = Cross competition experiments with an octamer sequence from the Ig heavy chain promoter, the BAT box, and a TA-rich sequence present in the CD21 promoter revealed that all three sequences bound the same nuclear proteins suggesting that the BAT box binding proteins were Oct-1 and Oct-2. Southwestern blotting and UV cross-linking studies confirmed that the BAT box binding proteins were Oct-1 and Oct-2. 1 Cross cross VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 competition competition NOUN NN Number=Sing _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 octamer octamer ADJ JJ Degree=Pos _ _ _ _ 7 sequence sequence NOUN NN Number=Sing _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 Ig ig PROPN NNP Number=Sing _ _ _ _ 11 heavy heavy ADJ JJ Degree=Pos _ _ _ _ 12 chain chain NOUN NN Number=Sing _ _ _ _ 13 promoter promoter ADV RBR Degree=Cmp _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 BAT bat NOUN NN Number=Sing _ _ _ _ 17 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 TA Ta NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 rich rich ADJ JJ Degree=Pos _ _ _ _ 24 sequence sequence NOUN NN Number=Sing _ _ _ _ 25 present present ADJ JJ Degree=Pos _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 CD21 Cd21 PROPN NNP Number=Sing _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ _ 30 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 that that SCONJ IN _ _ _ _ _ 32 all all DET DT _ _ _ _ _ 33 three three NUM CD NumType=Card _ _ _ _ 34 sequences sequence NOUN NNS Number=Plur _ _ _ _ 35 bound bound ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 same same ADJ JJ Degree=Pos _ _ _ _ 38 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 39 proteins protein NOUN NNS Number=Plur _ _ _ _ 40 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 41 that that SCONJ IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 BAT bat NOUN NN Number=Sing _ _ _ _ 44 box box NOUN NN Number=Sing _ _ _ _ 45 binding bind VERB VBG VerbForm=Ger _ _ _ _ 46 proteins protein NOUN NNS Number=Plur _ _ _ _ 47 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 48 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 -1 -1 NUM CD NumType=Card _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 -2 -2 NUM CD NumType=Card _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ 54 Southwestern southwestern ADJ JJ Degree=Pos _ _ _ _ 55 blotting blotting NOUN NN Number=Sing _ _ _ _ 56 and and CCONJ CC _ _ _ _ _ 57 UV UV PROPN NNP Number=Sing _ _ _ _ 58 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 60 linking link NOUN NN Number=Sing _ _ _ _ 61 studies study NOUN NNS Number=Plur _ _ _ _ 62 confirmed confirm VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 63 that that SCONJ IN _ _ _ _ _ 64 the the DET DT Definite=Def|PronType=Art _ _ _ _ 65 BAT bat NOUN NN Number=Sing _ _ _ _ 66 box box NOUN NN Number=Sing _ _ _ _ 67 binding bind VERB VBG VerbForm=Ger _ _ _ _ 68 proteins protein NOUN NNS Number=Plur _ _ _ _ 69 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 70 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 71 -1 -1 NUM CD NumType=Card _ _ _ _ 72 and and CCONJ CC _ _ _ _ _ 73 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 74 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 75 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 76 . . PUNCT . _ _ _ _ _ # sent_id = 2018 # text = The affinity of the BAT box binding proteins for the BAT box was approximately 25-fold less than for the octamer sequence and the BAT box binding proteins dissociated from the BAT box 10-fold more rapidly than from the octamer sequence. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 affinity affinity NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 BAT bat NOUN NN Number=Sing _ _ _ _ 6 box box NOUN NN Number=Sing _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 proteins protein NOUN NNS Number=Plur _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 BAT bat NOUN NN Number=Sing _ _ _ _ 12 box box NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 approximately approximately ADV RB _ _ _ _ _ 15 25 25 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 fold fold NOUN NN Number=Sing _ _ _ _ 18 less less ADJ JJR Degree=Cmp _ _ _ _ 19 than than ADP IN _ _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 octamer octamer NOUN NN Number=Sing _ _ _ _ 23 sequence sequence NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 BAT bat NOUN NN Number=Sing _ _ _ _ 27 box box NOUN NN Number=Sing _ _ _ _ 28 binding bind VERB VBG VerbForm=Ger _ _ _ _ 29 proteins protein NOUN NNS Number=Plur _ _ _ _ 30 dissociated dissociate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 from from ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 BAT bat PROPN NNP Number=Sing _ _ _ _ 34 box box NOUN NN Number=Sing _ _ _ _ 35 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 - - PUNCT , _ _ _ _ SpaceAfter=No 37 fold fold VERB VB VerbForm=Inf _ _ _ _ 38 more more ADV RBR _ _ _ _ _ 39 rapidly rapidly ADV RB _ _ _ _ _ 40 than than ADP IN _ _ _ _ _ 41 from from ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 octamer octamer NOUN NN Number=Sing _ _ _ _ 44 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 2019 # text = Despite this lower affinity, a trimer of the BAT box sequence was as efficiently transactivated by an Oct-2 expression vector as was a trimer of the octamer sequence in HeLa cells. 1 Despite despite ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 lower lower ADJ JJR Degree=Cmp _ _ _ _ 4 affinity affinity NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 trimer trimer NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 BAT bat PROPN NNP Number=Sing _ _ _ _ 11 box box NOUN NN Number=Sing _ _ _ _ 12 sequence sequence NOUN NN Number=Sing _ _ _ _ 13 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 as as SCONJ IN _ _ _ _ _ 15 efficiently efficiently ADV RB _ _ _ _ _ 16 transactivated transactivate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 vector vector NOUN NN Number=Sing _ _ _ _ 24 as as SCONJ IN _ _ _ _ _ 25 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 trimer trimer NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 octamer octamer ADJ JJ Degree=Pos _ _ _ _ 31 sequence sequence NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 2020 # text = The BAT box and Oct-2 were also implicated in the induction of CD20 in the pre-B cell line, PB-697, via phorbol esters. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 BAT bat NOUN NN Number=Sing _ _ _ _ 3 box box NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 also also ADV RB _ _ _ _ _ 10 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 induction induction NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 CD20 CD20 NUM CD NumType=Card _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 pre pre X AFX _ _ _ _ SpaceAfter=No 19 -B -b ADJ JJ Degree=Pos _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 PB Pb NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 697 697 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 via via ADP IN _ _ _ _ _ 28 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 29 esters ester NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2021 # text = The induction of CD20 mRNA was temporally associated with induction of Oct-2 mRNA and a BAT box-deleted CD20-CAT construct, in contrast to the wild type, was poorly induced by phorbol esters. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 CD20 CD20 PROPN NNP Number=Sing _ _ _ _ 5 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 temporally temporally ADV RB _ _ _ _ _ 8 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 BAT bat NOUN NN Number=Sing _ _ _ _ 19 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 deleted delet VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 CD20 CD20 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 CAT cat PROPN NNP Number=Sing _ _ _ _ 25 construct construct NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 contrast contrast NOUN NN Number=Sing _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 wild wild NOUN NN Number=Sing _ _ _ _ 32 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 35 poorly poorly ADV RB _ _ _ _ _ 36 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 by by ADP IN _ _ _ _ _ 38 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 39 esters ester NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 2022 # text = Together these results suggest that the BAT box binding proteins are important in the B cell specific expression of CD20 and perhaps CD21. 1 Together together SCONJ IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 results result NOUN NNS Number=Plur _ _ _ _ 4 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 BAT bat NOUN NN Number=Sing _ _ _ _ 8 box box NOUN NN Number=Sing _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 important important ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 B b PROPN NNP Number=Sing _ _ _ _ 16 cell cell PROPN NNP Number=Sing _ _ _ _ 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 CD20 CD20 PROPN NNP Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 perhaps perhaps ADV RB _ _ _ _ _ 23 CD21 Cd21 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2023 # text = Document 003003118 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003118 003003118 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2024 # text = Retinoic acid-induced expression of CD38 antigen in myeloid cells is mediated through retinoic acid receptor-alpha. 1 Retinoic Retinoic ADJ JJ Degree=Pos _ _ _ _ 2 acid acid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 CD38 CD38 PROPN NNP Number=Sing _ _ _ _ 8 antigen antigen NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 through through ADP IN _ _ _ _ _ 15 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 16 acid acid ADJ JJ Degree=Pos _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2025 # text = CD38 is a leukocyte differentiation antigen that has been thought to be a phenotypic marker of different subpopulations of T- and B- lymphocytes. 1 CD38 Cd38 NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 5 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 6 antigen antigen NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 10 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 phenotypic phenotypic ADJ JJ Degree=Pos _ _ _ _ 15 marker marker NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 different different ADJ JJ Degree=Pos _ _ _ _ 18 subpopulations subpopulation NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ _ 25 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2026 # text = In myeloid cells, CD38 is expressed during early stages of differentiation. 1 In in ADP IN _ _ _ _ _ 2 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 CD38 CD38 PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 during during ADP IN _ _ _ _ _ 9 early early ADJ JJ Degree=Pos _ _ _ _ 10 stages stage NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 2027 # text = Virtually no information is available on regulation and functions of CD38. 1 Virtually virtually ADV RB _ _ _ _ _ 2 no no DET DT _ _ _ _ _ 3 information information NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 available available ADJ JJ Degree=Pos _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 regulation regulation NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 functions function NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 CD CD NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 38 38 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 2028 # text = Recently we reported that all-trans-retinoic acid (ATRA) is a potent and highly specific inducer of CD38 expression in human promyelocytic leukemia cells. 1 Recently recently ADV RB _ _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 all all DET DT _ _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 10 acid acid NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 ATRA ATRA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 potent potent NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 highly highly ADV RB _ _ _ _ _ 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 inducer inducer NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 CD38 CD38 NUM CD NumType=Card _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ _ 27 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2029 # text = Here we report that ATRA-induced expression of CD38 antigen in myeloid cells is mediated through retinoic acid-alpha receptor (RAR alpha). 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 ATRA ATRA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 CD38 CD38 PROPN NNP Number=Sing _ _ _ _ 11 antigen antigen NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 through through ADP IN _ _ _ _ _ 18 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 19 acid acid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 alpha alpha NOUN NN Number=Sing _ _ _ _ 22 receptor receptor NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 RAR Rar NOUN NN Number=Sing _ _ _ _ 25 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2030 # text = ATRA failed to induce CD38 expression in a mutant subclone of the HL-60 myeloid leukemia cell line (designated HL-60R) that is relatively resistant to ATRA-induced granulocytic differentiation. 1 ATRA ATRA PROPN NNP Number=Sing _ _ _ _ 2 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 induce induce VERB VB VerbForm=Inf _ _ _ _ 5 CD38 Cd38 NUM CD NumType=Card _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 10 subclone subclone NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 HL HL NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 60 60 NUM CD NumType=Card _ _ _ _ 16 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 17 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 line line NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 60R 60R PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 that that PRON WDT PronType=Rel _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 relatively relatively ADV RB _ _ _ _ _ 29 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 ATRA ATRA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 35 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 2031 # text = Retroviral vector-mediated transduction of RA receptor (RAR alpha) into this HL-60R subclone completely restored the sensitivity of these cells to ATRA in terms of their ability to express CD38. 1 Retroviral Retroviral ADJ JJ Degree=Pos _ _ _ _ 2 vector vector NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 transduction transduction NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 RA RA PROPN NNP Number=Sing _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 RAR Rar NOUN NN Number=Sing _ _ _ _ 11 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 into into ADP IN _ _ _ _ _ 14 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 15 HL Hl NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 60R 60r NOUN NN Number=Sing _ _ _ _ 18 subclone subclone NOUN NN Number=Sing _ _ _ _ 19 completely completely ADV RB _ _ _ _ _ 20 restored restore VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 ATRA ATRA PROPN NNP Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 terms term NOUN NNS Number=Plur _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 32 ability ability NOUN NN Number=Sing _ _ _ _ 33 to to PART TO _ _ _ _ _ 34 express express VERB VB VerbForm=Inf _ _ _ _ 35 CD38 CD38 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 2032 # text = In contrast, CD38 expression was not inducible by ATRA in HL-60R cells, transfected with a functional RAR beta, RAR gamma, or RXR alpha receptor. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 CD38 CD38 NUM CD NumType=Card _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 ATRA ATRA PROPN NNP Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 60R 60r PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 functional functional ADJ JJ Degree=Pos _ _ _ _ 21 RAR RAR PROPN NNP Number=Sing _ _ _ _ 22 beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 RAR RAR PROPN NNP Number=Sing _ _ _ _ 25 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 RXR RXR PROPN NNP Number=Sing _ _ _ _ 29 alpha alpha PROPN NNP Number=Sing _ _ _ _ 30 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2033 # text = Induction of CD38 in acute promyelocytic and acute myeloblastic leukemia cells was independent of ATRA-induced cytodifferentiation. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 CD38 CD38 PROPN NNP Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 acute acute ADJ JJ Degree=Pos _ _ _ _ 6 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 acute acute ADJ JJ Degree=Pos _ _ _ _ 9 myeloblastic myeloblastic ADJ JJ Degree=Pos _ _ _ _ 10 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 independent independent ADJ JJ Degree=Pos _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 ATRA ATRA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 cytodifferentiation cytodifferentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2034 # text = Following culture with ATRA, increased CD38 protein levels were also observed in normal CD34+ bone marrow cells, but not on normal circulating granulocytes. 1 Following follow VERB VBG VerbForm=Ger _ _ _ _ 2 culture culture NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 ATRA ATRA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 CD38 CD38 NUM CD NumType=Card _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 levels level NOUN NNS Number=Plur _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 also also ADV RB _ _ _ _ _ 12 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 normal normal ADJ JJ Degree=Pos _ _ _ _ 15 CD34 CD34 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 + + SYM SYM _ _ _ _ _ 17 bone bone VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 marrow marrow ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 but but CCONJ CC _ _ _ _ _ 22 not not ADV RB _ _ _ _ _ 23 on on ADP IN _ _ _ _ _ 24 normal normal ADJ JJ Degree=Pos _ _ _ _ 25 circulating circulating NOUN NN Number=Sing _ _ _ _ 26 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2035 # text = From these results, we conclude that CD38 is ATRA inducible in myeloid leukemia cells and normal CD34+ bone marrow cells. 1 From from ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 results result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 CD38 CD38 PROPN NNP Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 ATRA ATRa ADV RB _ _ _ _ _ 11 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 14 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 normal normal ADJ JJ Degree=Pos _ _ _ _ 18 CD34 Cd34 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 + + SYM SYM _ _ _ _ _ 20 bone bone ADJ JJ Degree=Pos _ _ _ _ 21 marrow marrow ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2036 # text = This effect is independent of differentiation and is mediated by RAR alpha in HL-60 cells, suggesting a similar role for RAR alpha in CD38 expression in other hematopoietic cells. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 independent independent ADJ JJ Degree=Pos _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 RAR RAR PROPN NNP Number=Sing _ _ _ _ 12 alpha alpha ADV RB _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 60 60 NUM CD NumType=Card _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 similar similar ADJ JJ Degree=Pos _ _ _ _ 22 role role NOUN NN Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 RAR RAR PROPN NNP Number=Sing _ _ _ _ 25 alpha alpha PROPN NNP Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 CD38 CD38 PROPN NNP Number=Sing _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 other other ADJ JJ Degree=Pos _ _ _ _ 31 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2037 # text = Document 003003119 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003119 003003119 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2038 # text = Altered memory T cell differentiation in patients with early rheumatoid arthritis. 1 Altered alter VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 memory memory NOUN NN Number=Sing _ _ _ _ 3 T t NUM CD NumType=Card _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 patients patient NOUN NNS Number=Plur _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 early early ADJ JJ Degree=Pos _ _ _ _ 10 rheumatoid rheumatoid ADJ JJ Degree=Pos _ _ _ _ 11 arthritis arthritis NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2039 # text = The chronic immune response in rheumatoid arthritis (RA) might be driven by activated Th1 cells without sufficient Th2 cell differentiation to down-modulate inflammation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 3 immune immune ADJ JJ Degree=Pos _ _ _ _ 4 response response NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 rheumatoid rheumatoid ADJ JJ Degree=Pos _ _ _ _ 7 arthritis arthritis NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 might might AUX MD VerbForm=Fin _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 driven drive VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 Th1 Th1 NUM CD NumType=Card _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 without without ADP IN _ _ _ _ _ 19 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 20 Th2 th2 NUM CD NumType=Card _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 down down ADV RB _ _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 modulate modulate ADJ JJ Degree=Pos _ _ _ _ 27 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2040 # text = To test whether disordered memory T cell differentiation contributes to the typical Th1-dominated chronic inflammation in RA we investigated differentiation of resting CD4+ memory T cells in patients with early (6 wk to 12 mo) untreated RA and in age- and sex-matched healthy controls in vitro. 1 To to PART TO _ _ _ _ _ 2 test test VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 disordered disorder VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 memory memory NOUN NN Number=Sing _ _ _ _ 6 T t NUM CD NumType=Card _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 9 contributes contribute NOUN NNS Number=Plur _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 typical typical ADJ JJ Degree=Pos _ _ _ _ 13 Th1 th1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 dominated dominate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 17 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 RA RA PROPN NNP Number=Sing _ _ _ _ 20 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 21 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 23 of of SCONJ IN _ _ _ _ _ 24 resting rest VERB VBG VerbForm=Ger _ _ _ _ 25 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 + + SYM SYM _ _ _ _ _ 27 memory memory NOUN NN Number=Sing _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 patients patient NOUN NNS Number=Plur _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 early early ADV RB Degree=Pos _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 6 6 NUM CD NumType=Card _ _ _ _ 36 wk wk NOUN NN Number=Sing _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 12 12 NUM CD NumType=Card _ _ _ _ 39 mo mo NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 untreated untreated ADJ JJ Degree=Pos _ _ _ _ 42 RA RA PROPN NNP Number=Sing _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 age age NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT , _ _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 sex sex NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 -matched -match VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 50 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 51 controls control NOUN NNS Number=Plur _ _ _ _ 52 in in ADP IN _ _ _ _ _ 53 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 2041 # text = No difference in cytokine secretion profiles of freshly isolated memory T cells was detected between patients and controls. 1 No no DET DT _ _ _ _ _ 2 difference difference NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 cytokine cytokine ADJ JJ Degree=Pos _ _ _ _ 5 secretion secretion NOUN NN Number=Sing _ _ _ _ 6 profiles profile NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 freshly freshly ADV RB _ _ _ _ _ 9 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 memory memory NOUN NN Number=Sing _ _ _ _ 11 T t NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 between between ADP IN _ _ _ _ _ 16 patients patient NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 controls control NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2042 # text = A cell culture system was then employed that permitted the differentiation of Th effectors from resting memory T cells by short term priming. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 culture culture NOUN NN Number=Sing _ _ _ _ 4 system system NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 then then ADV RB PronType=Dem _ _ _ _ 7 employed employ VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 permitted permit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Th th PROPN NNP Number=Sing _ _ _ _ 14 effectors effector NOUN NNS Number=Plur _ _ _ _ 15 from from SCONJ IN _ _ _ _ _ 16 resting rest VERB VBG VerbForm=Ger _ _ _ _ 17 memory memory NOUN NN Number=Sing _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 short short ADJ JJ Degree=Pos _ _ _ _ 22 term term NOUN NN Number=Sing _ _ _ _ 23 priming priming VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2043 # text = Marked differences were found in response to priming. 1 Marked marked ADJ JJ Degree=Pos _ _ _ _ 2 differences difference NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 response response NOUN NN Number=Sing _ _ _ _ 7 to to SCONJ IN _ _ _ _ _ 8 priming priming VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 2044 # text = Th2 cells could be induced in all healthy controls by priming with anti-CD28 in the absence of TCR ligation. 1 Th2 Th2 NUM CD NumType=Card _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 could could AUX MD VerbForm=Fin _ _ _ _ 4 be be AUX VB VerbForm=Inf _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 all all DET DT _ _ _ _ _ 8 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 9 controls control NOUN NNS Number=Plur _ _ _ _ 10 by by SCONJ IN _ _ _ _ _ 11 priming prim VERB VBG VerbForm=Ger _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 anti-CD28 anti-cd28 NUM CD NumType=Card _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 absence absence NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 TCR Tcr NOUN NN Number=Sing _ _ _ _ 19 ligation ligation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2045 # text = By contrast, priming under those conditions resulted in Th2 differentiation in only 9 of 24 RA patients. 1 By by ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 priming priming VERB VBG VerbForm=Ger _ _ _ _ 5 under under ADP IN _ _ _ _ _ 6 those those DET DT Number=Plur|PronType=Dem _ _ _ _ 7 conditions condition NOUN NNS Number=Plur _ _ _ _ 8 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 Th2 Th2 NUM CD NumType=Card _ _ _ _ 11 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 only only ADV RB _ _ _ _ _ 14 9 9 NUM CD NumType=Card _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 24 24 NUM CD NumType=Card _ _ _ _ 17 RA RA PROPN NNP Number=Sing _ _ _ _ 18 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2046 # text = Exogenous IL-4 could overcome the apparent Th2 differentiation defect in seven patients but was without effect in the remaining eight patients. 1 Exogenous Exogenous PROPN NNP Number=Sing _ _ _ _ 2 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 4 4 NUM CD NumType=Card _ _ _ _ 5 could could AUX MD VerbForm=Fin _ _ _ _ 6 overcome overcome VERB VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 apparent apparent ADJ JJ Degree=Pos _ _ _ _ 9 Th2 Th2 NOUN NN Number=Sing _ _ _ _ 10 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 11 defect defect NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 seven seven NUM CD NumType=Card _ _ _ _ 14 patients patient NOUN NNS Number=Plur _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 without without ADP IN _ _ _ _ _ 18 effect effect NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 remaining remaining VERB VBG VerbForm=Ger _ _ _ _ 22 eight eight NUM CD NumType=Card _ _ _ _ 23 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2047 # text = In all patients a marked decrease in IL-2-producing cells and a significant increase in well-differentiated Th1 cells that produced IFN-gamma but not IL-2 were evident after priming with anti-CD3 and anti-CD28. 1 In in ADP IN _ _ _ _ _ 2 all all DET DT _ _ _ _ _ 3 patients patient NOUN NNS Number=Plur _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 decrease decrease NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 producing produce VERB VBG VerbForm=Ger _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 significant significant ADJ JJ Degree=Pos _ _ _ _ 17 increase increase NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 well well ADV RB Degree=Pos _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 Th1 th1 NUM CD NumType=Card _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 produced produce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 gamma gamma NOUN NN Number=Sing _ _ _ _ 29 but but CCONJ CC _ _ _ _ _ 30 not not PART RB _ _ _ _ _ 31 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 2 2 NUM CD NumType=Card _ _ _ _ 34 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 evident evident ADJ JJ Degree=Pos _ _ _ _ 36 after after SCONJ IN _ _ _ _ _ 37 priming prim VERB VBG VerbForm=Ger _ _ _ _ 38 with with ADP IN _ _ _ _ _ 39 anti-CD3 anti-CD3 NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 anti-CD28 anti-cd28 NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 2048 # text = The data suggest that CD4+ memory T cells from patients with early untreated RA manifest an intrinsic abnormality in their ability to differentiate into specific cytokine-producing effector cells that might contribute to the characteristic Th1-dominated chronic (auto)immune inflammation in RA. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 + + SYM SYM _ _ _ _ _ 7 memory memory NOUN NN Number=Sing _ _ _ _ 8 T t NUM CD NumType=Card _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 patients patient NOUN NNS Number=Plur _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 early early ADJ JJ Degree=Pos _ _ _ _ 14 untreated untreated ADJ JJ Degree=Pos _ _ _ _ 15 RA Ra NOUN NN Number=Sing _ _ _ _ 16 manifest manifest ADV RBS Degree=Sup _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 intrinsic intrinsic ADJ JJ Degree=Pos _ _ _ _ 19 abnormality abnormality NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 22 ability ability NOUN NN Number=Sing _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 differentiate differentiate VERB VB VerbForm=Inf _ _ _ _ 25 into into ADP IN _ _ _ _ _ 26 specific specific ADJ JJ Degree=Pos _ _ _ _ 27 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 producing produce VERB VBG VerbForm=Ger _ _ _ _ 30 effector effector NOUN NN Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 that that PRON WDT PronType=Rel _ _ _ _ 33 might might AUX MD VerbForm=Fin _ _ _ _ 34 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 characteristic characteristic NOUN NN Number=Sing _ _ _ _ 38 Th1 th1 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 - - PUNCT : _ _ _ _ SpaceAfter=No 40 dominated dominate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 chronic chronic NOUN NN Number=Sing _ _ _ _ 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 auto auto NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 45 immune immune ADJ JJ Degree=Pos _ _ _ _ 46 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2049 # text = Document 003003122 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003122 003003122 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2050 # text = c-Myc and E1A induced cellular sensitivity to activated NK cells involves cytotoxic granules as death effectors. 1 c class NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 Myc Myc PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 E1 E1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 9 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 NK NK PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 cytotoxic cytotoxic ADJ JJ Degree=Pos _ _ _ _ 16 granules granule NOUN NNS Number=Plur _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 death death NOUN NN Number=Sing _ _ _ _ 19 effectors effector NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2051 # text = The contact of natural killer (NK) cells with foreign cells and with certain virus-infected or tumor cells triggers the cytolytic machinery of NK cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 contact contact NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 natural natural ADJ JJ Degree=Pos _ _ _ _ 5 killer killer NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 NK NK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 foreign foreign ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 certain certain ADJ JJ Degree=Pos _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 tumor tumor NOUN NN Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 triggers trigger NOUN NNS Number=Plur _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 cytolytic cytolytic ADJ JJ Degree=Pos _ _ _ _ 25 machinery machinery NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 NK NK PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2052 # text = This triggering leads to exocytosis of the cytotoxic NK cell granules. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 triggering triggering NOUN NN Number=Sing _ _ _ _ 3 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 exocytosis exocytosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 cytotoxic cytotoxic ADJ JJ Degree=Pos _ _ _ _ 9 NK NK PROPN NNP Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 granules granule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 2053 # text = The oncoproteins c-Myc and E1A render cells vulnerable to NK cell mediated cytolysis yet the mechanisms of sensitization are not well understood. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 oncoproteins oncoprotein NOUN NNS Number=Plur _ _ _ _ 3 c- c- PUNCT , _ _ _ _ SpaceAfter=No 4 Myc Myc PROPN NNP Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 E1 E1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 render render NOUN NN Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 vulnerable vulnerable ADJ JJ Degree=Pos _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 NK Nk PROPN NNP Number=Sing _ _ _ _ 13 cell cell PROPN NNP Number=Sing _ _ _ _ 14 mediated mediate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 cytolysis cytolysis NOUN NN Number=Sing _ _ _ _ 16 yet yet CCONJ CC _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 sensitization sensitization NOUN NN Number=Sing _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 well well ADV RB Degree=Pos _ _ _ _ 24 understood understand VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2054 # text = In a model where foreign cells (rat fibroblasts) were cocultured with human IL-2 activated NK cells, we observed that NK cells were capable of efficiently killing their targets only if the cells overexpressed the oncogene c-Myc or E1A. 1 In in ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 model model NOUN NN Number=Sing _ _ _ _ 4 where where ADV WRB PronType=Rel _ _ _ _ 5 foreign foreign ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 rat rat NOUN NN Number=Sing _ _ _ _ 9 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 cocultured coculture VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 NK Nk PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 23 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 NK NK PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 capable capable ADJ JJ Degree=Pos _ _ _ _ 29 of of SCONJ IN _ _ _ _ _ 30 efficiently efficiently ADV RB _ _ _ _ _ 31 killing kill VERB VBG VerbForm=Ger _ _ _ _ 32 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 33 targets target NOUN NNS Number=Plur _ _ _ _ 34 only only ADV RB _ _ _ _ _ 35 if if SCONJ IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ _ 38 overexpressed overexpress VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 oncogene oncogene ADJ JJ Degree=Pos _ _ _ _ 41 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 Myc Myc PROPN NNP Number=Sing _ _ _ _ 44 or or CCONJ CC _ _ _ _ _ 45 E1A E1A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 2055 # text = Both the parental and the oncogene expressing fibroblasts similarly triggered phosphoinositide hydrolysis in the bound NK cells, demonstrating that NK cells were cytolytically activated in contact with both resistant parental and oncogene expressing sensitive target fibroblasts. 1 Both both CCONJ CC _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 parental parental NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 oncogene oncogene NOUN NN Number=Sing _ _ _ _ 7 expressing express VERB VBG VerbForm=Ger _ _ _ _ 8 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 9 similarly similarly ADV RB _ _ _ _ _ 10 triggered trigger VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 phosphoinositide phosphoinositide NOUN NN Number=Sing _ _ _ _ 12 hydrolysis hydrolysis NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 bound bound ADJ JJ Degree=Pos _ _ _ _ 16 NK Nk PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 demonstrating demonstrat VERB VBG VerbForm=Ger _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 NK NK PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 cytolytically cytolytically ADV RB _ _ _ _ _ 25 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 contact contact NOUN NN Number=Sing _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 both both DET DT _ _ _ _ _ 30 resistant resistant NOUN NN Number=Sing _ _ _ _ 31 parental parental NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 oncogene oncogene ADV RB _ _ _ _ _ 34 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 35 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 36 target target NOUN NN Number=Sing _ _ _ _ 37 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 2056 # text = The cell death was independent of wild-type p53 and was not inhibited by an anti-apoptotic protein EIB19K. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 death death NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 independent independent ADJ JJ Degree=Pos _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 type type NOUN NN Number=Sing _ _ _ _ 10 p53 p53 NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 anti-apoptotic anti-apoptotic ADJ JJ Degree=Pos _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 EIB EIB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 19K 19K PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2057 # text = These results provided evidence that c-Myc and E1A activated the NK cell induced cytolysis at a post-triggering stage of NK cell-target cell interaction. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 provided provide VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 evidence evidence NOUN NN Number=Sing _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 c- c- SYM NFP _ _ _ _ SpaceAfter=No 7 Myc Myc PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 E1 E1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 A A PROPN NNP Number=Sing _ _ _ _ 11 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 NK NK PROPN NNP Number=Sing _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 cytolysis cytolysis NOUN NN Number=Sing _ _ _ _ 17 at at ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 post post NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 -triggering -trigger VERB VBG VerbForm=Ger _ _ _ _ 21 stage stage NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 NK NK PROPN NNP Number=Sing _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 target target NOUN NN Number=Sing _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 interaction interaction NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2058 # text = In consistence, the c-Myc and E1A overexpressing fibroblasts were more sensitive to the cytolytic effects of isolated NK cell-derived granules than parental cells. 1 In in ADP IN _ _ _ _ _ 2 consistence consistence NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 Myc Myc PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 E1A E1A PROPN NNP Number=Sing _ _ _ _ 10 overexpressing overexpresse ADJ JJ Degree=Pos _ _ _ _ 11 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 more more ADV RBR _ _ _ _ _ 14 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 cytolytic cytolytic ADJ JJ Degree=Pos _ _ _ _ 18 effects effect NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 NK NK PROPN NNP Number=Sing _ _ _ _ 22 cell cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 granules granule NOUN NNS Number=Plur _ _ _ _ 26 than than ADP IN _ _ _ _ _ 27 parental parental ADJ JJ Degree=Pos _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2059 # text = The data indicate that oncogenes activate the cytotoxicity of NK cell granules. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 oncogenes oncogene NOUN NNS Number=Plur _ _ _ _ 6 activate activate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 cytotoxicity cytotoxicity NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NK NK PROPN NNP Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 granules granule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 2060 # text = This mechanism can have a role in directing the cytolytic action of NK cells towards the virus-infected and cancer cells. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 3 can can AUX MD VerbForm=Fin _ _ _ _ 4 have have VERB VB VerbForm=Inf _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 in in SCONJ IN _ _ _ _ _ 8 directing direct VERB VBG VerbForm=Ger _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 cytolytic cytolytic ADJ JJ Degree=Pos _ _ _ _ 11 action action NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NK NK PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 towards towards ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 infected infect ADJ JJ Degree=Pos _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 cancer cancer NOUN NN Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2061 # text = Document 003003125 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003125 003003125 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2062 # text = Lymphocyte glucocorticoid receptor: predictor of sertraline response in adolescent major depressive disorder (MDD). 1 Lymphocyte Lymphocyte ADJ JJ Degree=Pos _ _ _ _ 2 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ _ 3 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ 5 predictor predictor NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 sertraline sertraline NOUN NN Number=Sing _ _ _ _ 8 response response NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 adolescent adolescent ADJ JJ Degree=Pos _ _ _ _ 11 major major ADJ JJ Degree=Pos _ _ _ _ 12 depressive depressive ADJ JJ Degree=Pos _ _ _ _ 13 disorder disorder NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 MDD MDD NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2063 # text = Major depressive disorder (MDD) in adolescents demonstrates resistance to tricyclic antidepressants and absence of hypercortisolemia. 1 Major major ADJ JJ Degree=Pos _ _ _ _ 2 depressive depressive ADJ JJ Degree=Pos _ _ _ _ 3 disorder disorder NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 MDD MDD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 adolescents adolescent NOUN NNS Number=Plur _ _ _ _ 9 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 resistance resistance NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 tricyclic tricyclic ADJ JJ Degree=Pos _ _ _ _ 13 antidepressants antidepressant NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 absence absence NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 hypercortisolemia hypercortisolemion NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2064 # text = The efficacy of serotonin reuptake inhibitors (SRIs) is uncertain, and response predictors are unavailable. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 efficacy efficacy NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 serotonin serotonin ADJ JJ Degree=Pos _ _ _ _ 5 reuptake reuptake NOUN NN Number=Sing _ _ _ _ 6 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 SRIs SRIs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 uncertain uncertain ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 response response NOUN NN Number=Sing _ _ _ _ 15 predictors predictor NOUN NNS Number=Plur _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 unavailable unavailable ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2065 # text = Abnormal fast feedback and negative feedback of the hypothalamic-pituitary-adrenal axis implicates a dampened limbic-hippocampal glucocorticoid type II receptor (GCII). 1 Abnormal abnormal ADJ JJ Degree=Pos _ _ _ _ 2 fast fast ADJ JJ Degree=Pos _ _ _ _ 3 feedback feedback NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 negative negative ADJ JJ Degree=Pos _ _ _ _ 6 feedback feedback NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 hypothalamic hypothalamic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 -pituitary-adrenal -pituitary-adrenal ADJ JJ Degree=Pos _ _ _ _ 11 axis axis NOUN NN Number=Sing _ _ _ _ 12 implicates implicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 dampened dampen VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 limbic limbic NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 hippocampal hippocampal ADJ JJ Degree=Pos _ _ _ _ 18 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ _ 19 type type NOUN NN Number=Sing _ _ _ _ 20 II ii NUM CD NumType=Card _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 GCII GCII PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2066 # text = We hypothesized that lymphocyte GCII is altered in adolescent MDD and could serve as a marker for response to SRIs. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 hypothesized hypothesize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 5 GCII GCII NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 altered alter VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 adolescent adolescent ADJ JJ Degree=Pos _ _ _ _ 10 MDD mdd NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 could could AUX MD VerbForm=Fin _ _ _ _ 13 serve serve VERB VB VerbForm=Inf _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 marker marker NOUN NN Number=Sing _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 response response NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 SRIs SRIs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2067 # text = In an open-label study, adolescents (n = 20) meeting DSM-III-R criteria for MDD showed baseline lymphocyte GCII sites per cell (sites/cell) values of 793 +/- 106 versus 2,563 +/- 499 (+/- SEM) for matched controls (n = 18) (t = 3.5; df = 36; p < .001). 1 In in ADP IN _ _ _ _ _ 2 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 open open ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 label label NOUN NN Number=Sing _ _ _ _ 6 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 adolescents adolescent NOUN NNS Number=Plur _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 n not NOUN NN Number=Sing _ _ _ _ 11 = = SYM SYM _ _ _ _ _ 12 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 meeting meet NOUN NN Number=Sing _ _ _ _ 15 DSM DSM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 III III PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 R R PROPN NNP Number=Sing _ _ _ _ 20 criteria criteria NOUN NN Number=Sing _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 MDD MDD PROPN NNP Number=Sing _ _ _ _ 23 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 baseline baseline NOUN NN Number=Sing _ _ _ _ 25 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 26 GCII Gcii NUM CD NumType=Card _ _ _ _ 27 sites site NOUN NNS Number=Plur _ _ _ _ 28 per per ADP IN _ _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 / / PUNCT , _ _ _ _ SpaceAfter=No 33 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 values value NOUN NNS Number=Plur _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 793 793 NUM CD NumType=Card _ _ _ _ 38 +/- +/- SYM SYM _ _ _ _ _ 39 106 106 NUM CD NumType=Card _ _ _ _ 40 versus versus ADP IN _ _ _ _ _ 41 2,563 2,563 NUM CD NumType=Card _ _ _ _ 42 +/- +/- SYM SYM _ _ _ _ _ 43 499 499 NUM CD NumType=Card _ _ _ _ 44 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 45 +/- +/- SYM NFP _ _ _ _ _ 46 SEM SEM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 ) ) PUNCT -RRB- _ _ _ _ _ 48 for for ADP IN _ _ _ _ _ 49 matched match VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 controls control NOUN NNS Number=Plur _ _ _ _ 51 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 52 n not NOUN NN Number=Sing _ _ _ _ 53 = = SYM SYM _ _ _ _ _ 54 18 18 NUM CD NumType=Card _ _ _ SpaceAfter=No 55 ) ) PUNCT -RRB- _ _ _ _ _ 56 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 57 t t NOUN NN Number=Sing _ _ _ _ 58 = = SYM SYM _ _ _ _ _ 59 3.5 3.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 60 ; ; PUNCT , _ _ _ _ _ 61 df df NOUN NN Number=Sing _ _ _ _ 62 = = SYM SYM _ _ _ _ _ 63 36 36 NUM CD NumType=Card _ _ _ SpaceAfter=No 64 ; ; PUNCT , _ _ _ _ _ 65 p p NOUN NN Number=Sing _ _ _ _ 66 < < PUNCT -LRB- _ _ _ _ _ 67 .001 .001 NUM CD NumType=Card _ _ _ SpaceAfter=No 68 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 69 . . PUNCT . _ _ _ _ _ # sent_id = 2068 # text = GCII was bimodally distributed, with SRI responders differing from nonresponders (t = 3.9; df = 14; p < .001). 1 GCII GCII PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 bimodally bimodally ADV RB _ _ _ _ _ 4 distributed distribute VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 SRI Sri NOUN NN Number=Sing _ _ _ _ 8 responders responder NOUN NNS Number=Plur _ _ _ _ 9 differing differ VERB VBG VerbForm=Ger _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 nonresponders nonresponder NOUN NNS Number=Plur _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 t t NUM CD NumType=Card _ _ _ _ 14 = = SYM SYM _ _ _ _ _ 15 3.9 3.9 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ; ; PUNCT , _ _ _ _ _ 17 df df NOUN NN Number=Sing _ _ _ _ 18 = = SYM SYM _ _ _ _ _ 19 14 14 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ; ; PUNCT , _ _ _ _ _ 21 p p NOUN NN Number=Sing _ _ _ _ 22 < < PUNCT -LRB- _ _ _ _ _ 23 .001 .001 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2069 # text = GCII accurately classified 90 percent of sertraline responders and 80 percent of nonresponders. 1 GCII GCII PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 accurately accurately ADV RB _ _ _ _ _ 3 classified classify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 90 90 NUM CD NumType=Card _ _ _ _ 5 percent percent NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 sertraline sertraline NOUN NN Number=Sing _ _ _ _ 8 responders responder NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 80 80 NUM CD NumType=Card _ _ _ _ 11 percent percent NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 nonresponders nonresponder NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 2070 # text = Only SRI responders showed GCII sites/cell upregulated after 6 weeks of treatment (t = 2.1, df = 10; p < .05). 1 Only only ADV RB _ _ _ _ _ 2 SRI Sri PROPN NNP Number=Sing _ _ _ _ 3 responders responder NOUN NNS Number=Plur _ _ _ _ 4 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 GCII Gcii PROPN NNP Number=Sing _ _ _ _ 6 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 upregulated upregulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 after after ADP IN _ _ _ _ _ 11 6 6 NUM CD NumType=Card _ _ _ _ 12 weeks week NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 treatment treatment NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 t t NOUN NN Number=Sing _ _ _ _ 17 = = SYM SYM _ _ _ _ _ 18 2.1 2.1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 df df PROPN NNP Number=Sing _ _ _ _ 21 = = SYM SYM _ _ _ _ _ 22 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ; ; PUNCT , _ _ _ _ _ 24 p p NOUN NN Number=Sing _ _ _ _ 25 < < PUNCT -LRB- _ _ _ _ _ 26 .05 .05 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2071 # text = Document 003003126 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003126 003003126 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2072 # text = Transcriptional activity of core binding factor-alpha (AML1) and beta subunits on murine leukemia virus enhancer cores. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 activity activity NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 core core NOUN NN Number=Sing _ _ _ _ 5 binding bind VERB VBG VerbForm=Ger _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 -alpha -alpha NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 AML1 AML1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 beta beta NOUN NN Number=Sing _ _ _ _ 13 subunits subunit NOUN NNS Number=Plur _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 murine murine NOUN NN Number=Sing _ _ _ _ 16 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 17 virus virus NOUN NN Number=Sing _ _ _ _ 18 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 19 cores core NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2073 # text = Core binding factor (CBF), also known as polyomavirus enhancer-binding protein 2 and SL3 enhancer factor 1, is a mammalian transcription factor that binds to an element termed the core within the enhancers of the murine leukemia virus family of retroviruses. 1 Core core VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 binding binding VERB VBG VerbForm=Ger _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 CBF CBF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 also also ADV RB _ _ _ _ _ 9 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 polyomavirus polyomavirus NOUN NN Number=Sing _ _ _ _ 12 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 binding binding VERB VBG VerbForm=Ger _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 2 2 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 SL3 SL3 NUM CD NumType=Card _ _ _ _ 19 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ _ 28 that that PRON WDT PronType=Rel _ _ _ _ 29 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 element element NOUN NN Number=Sing _ _ _ _ 33 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 core core NOUN NN Number=Sing _ _ _ _ 36 within within ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 enhancers enhancer NOUN NNS Number=Plur _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 murine murine NOUN NN Number=Sing _ _ _ _ 42 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 43 virus virus NOUN NN Number=Sing _ _ _ _ 44 family family NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 retroviruses retroviruse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 2074 # text = The core elements of the SL3 virus are important genetic determinants of the ability of this virus to induce T-cell lymphomas and the transcriptional activity of the viral long terminal repeat in T lymphocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 core core NOUN NN Number=Sing _ _ _ _ 3 elements element NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 SL3 SL3 NOUN NN Number=Sing _ _ _ _ 7 virus virus NOUN NN Number=Sing _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 important important ADJ JJ Degree=Pos _ _ _ _ 10 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 11 determinants determinant NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 ability ability NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 17 virus virus NOUN NN Number=Sing _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 induce induce VERB VB VerbForm=Inf _ _ _ _ 20 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 lymphomas lymphoma NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 26 activity activity NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 viral viral ADJ JJ Degree=Pos _ _ _ _ 30 long long ADJ JJ Degree=Pos _ _ _ _ 31 terminal terminal NOUN NN Number=Sing _ _ _ _ 32 repeat repeat VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 T t PROPN NNP Number=Sing _ _ _ _ 35 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 2075 # text = CBF consists of two subunits, a DNA binding subunit, CBF alpha, and a second subunit, CBF beta, that stimulates the DNA binding activity of CBF alpha. 1 CBF Cbf PROPN NNP Number=Sing _ _ _ _ 2 consists consist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 DNA dna NOUN NN Number=Sing _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 subunit subunit NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 CBF CBF PROPN NNP Number=Sing _ _ _ _ 13 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 18 subunit subunit NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 CBF CBF PROPN NNP Number=Sing _ _ _ _ 21 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 24 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 DNA dna NOUN NN Number=Sing _ _ _ _ 27 binding binde VERB VBG VerbForm=Ger _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 CBF CBF PROPN NNP Number=Sing _ _ _ _ 31 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2076 # text = One of the genes that encodes a CBF alpha subunit is AML1, also called Cbf alpha 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 genes gene NOUN NNS Number=Plur _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 CBF Cbf PROPN NNP Number=Sing _ _ _ _ 9 alpha alpha NOUN NN Number=Sing _ _ _ _ 10 subunit subunit NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 AML1 AML1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 Cbf Cbf PROPN NNP Number=Sing _ _ _ _ 17 alpha alpha NOUN NN Number=Sing _ _ _ _ # sent_id = 2077 # text = 2. 1 2 2 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ # sent_id = 2078 # text = This locus is rearranged by chromosomal translocations in human myeloproliferative disorders and leukemias. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 locus locus NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 rearranged rearrange VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 chromosomal chromosomal ADJ JJ Degree=Pos _ _ _ _ 7 translocations translocation NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 myeloproliferative myeloproliferative ADJ JJ Degree=Pos _ _ _ _ 11 disorders disorder NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 leukemias leukemia NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 2079 # text = An exogenously expressed Cbf alpha 2-encoded subunit (CBF alpha 2-451) stimulated transcription from the SL3 enhancer in P19 and HeLa cells. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 exogenously exogenously ADV RB _ _ _ _ _ 3 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 Cbf Cbf PROPN NNP Number=Sing _ _ _ _ 5 alpha alpha NOUN NN Number=Sing _ _ _ _ 6 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 subunit subunit NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 CBF CBF NOUN NN Number=Sing _ _ _ _ 12 alpha alpha NOUN NN Number=Sing _ _ _ _ 13 2- 2- SYM SYM _ _ _ _ SpaceAfter=No 14 451 451 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 SL3 SL3 NOUN NN Number=Sing _ _ _ _ 21 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 P19 P19 PROPN NNP Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2080 # text = Activity was mediated through the core elements. 1 Activity activity NOUN NN Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 through through ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 core core NOUN NN Number=Sing _ _ _ _ 7 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 2081 # text = Three different isoforms of CBF beta were also tested for transcriptional activity on the SL3 enhancer. 1 Three Three NUM CD NumType=Card _ _ _ _ 2 different different ADJ JJ Degree=Pos _ _ _ _ 3 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 CBF CBF PROPN NNP Number=Sing _ _ _ _ 6 beta beta NOUN NN Number=Sing _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 also also ADV RB _ _ _ _ _ 9 tested test VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 SL3 SL3 NUM CD NumType=Card _ _ _ _ 16 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2082 # text = The longest form, CBF beta-187, increased the transcriptional stimulation by CBF alpha 2-451 twofold in HeLa cells, although it had no effect in P19 cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 longest longest ADJ JJS Degree=Sup _ _ _ _ 3 form form NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 CBF CBF PROPN NNP Number=Sing _ _ _ _ 6 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 187 187 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 13 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 CBF CBF PROPN NNP Number=Sing _ _ _ _ 16 alpha alpha ADV RB _ _ _ _ _ 17 2- 2- SYM SYM _ _ _ _ SpaceAfter=No 18 451 451 NUM CD NumType=Card _ _ _ _ 19 twofold twofold NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 although although SCONJ IN _ _ _ _ _ 25 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 26 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 no no DET DT _ _ _ _ _ 28 effect effect NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 P19 P19 NUM CD NumType=Card _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2083 # text = Transcriptional activation by CBF beta required binding to the CBF alpha subunit, as a form of CBF beta that lacked binding ability, CBF beta-148, failed to increase activity. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 CBF CBF PROPN NNP Number=Sing _ _ _ _ 5 beta beta PROPN NNP Number=Sing _ _ _ _ 6 required require VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 CBF CBF PROPN NNP Number=Sing _ _ _ _ 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 subunit subunit NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 form form NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 CBF CBF PROPN NNP Number=Sing _ _ _ _ 19 beta beta NOUN NN Number=Sing _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 lacked lack VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 ability ability NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 CBF CBF PROPN NNP Number=Sing _ _ _ _ 26 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 148 148 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 increase increase VERB VB VerbForm=Inf _ _ _ _ 33 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2084 # text = These results indicated that at least in certain cell types, the maximum activity of CBF required both subunits. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 at at ADV RB _ _ _ _ _ 6 least least ADV RBS Degree=Sup _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 certain certain ADJ JJ Degree=Pos _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 maximum maximum ADJ JJ Degree=Pos _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 CBF CBF PROPN NNP Number=Sing _ _ _ _ 17 required require VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 both both DET DT _ _ _ _ _ 19 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2085 # text = They also provided support for the hypothesis that CBF is a factor in T lymphocytes that is responsible for recognition of the SL3 cores. 1 They they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 provided provide VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 support support NOUN NN Number=Sing _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 CBF CBF PROPN NNP Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 recognition recognition NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 SL3 SL3 NOUN NN Number=Sing _ _ _ _ 24 cores core NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2086 # text = We also examined whether CBF could distinguish a 1-bp difference between the enhancer core of SL3 and the core of the nonleukemogenic virus, Akv. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 whether whether SCONJ IN _ _ _ _ _ 5 CBF CBF PROPN NNP Number=Sing _ _ _ _ 6 could could AUX MD VerbForm=Fin _ _ _ _ 7 distinguish distinguish VERB VB VerbForm=Inf _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 bp bp NOUN NN Number=Sing _ _ _ _ 12 difference difference NOUN NN Number=Sing _ _ _ _ 13 between between ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 16 core core NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 SL3 SL3 NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 core core NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 nonleukemogenic nonleukemogenic ADJ JJ Degree=Pos _ _ _ _ 25 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 Akv Akv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2087 # text = This difference strongly affects transcription in T cells and leukemogenicity of SL3. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 difference difference NOUN NN Number=Sing _ _ _ _ 3 strongly strongly ADV RB _ _ _ _ _ 4 affects affect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 leukemogenicity leukemogenicity NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 SL3 SL3 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 2088 # text = However, no combination of CBF alpha and CBF beta subunits that we tested was able to distinguish the 1-bp difference in transcription assays. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 no no DET DT _ _ _ _ _ 4 combination combination NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 CBF CBF PROPN NNP Number=Sing _ _ _ _ 7 alpha alpha PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 CBF CBF PROPN NNP Number=Sing _ _ _ _ 10 beta beta NOUN NN Number=Sing _ _ _ _ 11 subunits subunit NOUN NNS Number=Plur _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 tested test VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 able able ADJ JJ Degree=Pos _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 distinguish distinguish VERB VB VerbForm=Inf _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 bp bp NOUN NN Number=Sing _ _ _ _ 23 difference difference NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2089 # text = Thus, a complete understanding of how T cells recognize the SL3 core remains to be elucidated. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 complete complete ADJ JJ Degree=Pos _ _ _ _ 5 understanding understanding NOUN NN Number=Sing _ _ _ _ 6 of of SCONJ IN _ _ _ _ _ 7 how how ADV WRB PronType=Int _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 recognize recognize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 SL3 SL3 NOUN NN Number=Sing _ _ _ _ 13 core core NOUN NN Number=Sing _ _ _ _ 14 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 be be AUX VB VerbForm=Inf _ _ _ _ 17 elucidated elucidate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2090 # text = Document 003003129 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003129 003003129 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2091 # text = Selective DNA-binding activity of interleukin-10-stimulated STAT molecules in human monocytes. 1 Selective selective ADJ JJ Degree=Pos _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 STAT Stat NOUN NN Number=Sing _ _ _ _ 13 molecules molecule NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2092 # text = It has been demonstrated that interferon-gamma (IFN-gamma) and interleukin-10 (IL-10) have various reverse effects on macrophages; however, the molecular mechanism of this difference has not been fully understood. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 4 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 gamma gamma NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 IFN Ifn ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 -gamma -gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 interleukin interleukin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 -10 -10 NUM CD NumType=Card _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 various various ADJ JJ Degree=Pos _ _ _ _ 23 reverse reverse NOUN NN Number=Sing _ _ _ _ 24 effects effect NOUN NNS Number=Plur _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 ; ; PUNCT , _ _ _ _ _ 28 however however ADV RB _ _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 32 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 35 difference difference NOUN NN Number=Sing _ _ _ _ 36 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 not not PART RB _ _ _ _ _ 38 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 39 fully fully ADV RB _ _ _ _ _ 40 understood understand ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 2093 # text = In this study, we analyzed the binding activity of IL-10- and IFN-gamma-activated 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 IFN- Ifn- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ # sent_id = 2094 # text = STAT molecules to two kinds of GAS-motif sequences. 1 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 2 molecules molecule NOUN NNS Number=Plur _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 kinds kind NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 GAS gas PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 motif motif NOUN NN Number=Sing _ _ _ _ 10 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 2095 # text = IL-10-activated STAT1 could bind to the GAS-motif sequence in the promoter region of the Fcgamma receptor, but not to that in the promoter region of the COX-2 gene, whereas IFN-gamma-activated STAT1 and STAT5 could bind to both sequences. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 STAT1 stat1 PROPN NNP Number=Sing _ _ _ _ 7 could could AUX MD VerbForm=Fin _ _ _ _ 8 bind bind VERB VB VerbForm=Inf _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 GAS gas NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 motif motif NOUN NN Number=Sing _ _ _ _ 14 sequence sequence NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 region region NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 Fcgamma Fcgamma PROPN NNP Number=Sing _ _ _ _ 22 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 but but CCONJ CC _ _ _ _ _ 25 not not ADV RB _ _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 promoter promoter NOUN NN Number=Sing _ _ _ _ 31 region region NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 COX cox NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 2 2 NUM CD NumType=Card _ _ _ _ 37 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 whereas whereas SCONJ IN _ _ _ _ _ 40 IFN- IFN- NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 STAT1 stat1 PROPN NNP Number=Sing _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 STAT5 stat5 PROPN NNP Number=Sing _ _ _ _ 47 could could AUX MD VerbForm=Fin _ _ _ _ 48 bind bind VERB VB VerbForm=Inf _ _ _ _ 49 to to ADP IN _ _ _ _ _ 50 both both DET DT _ _ _ _ _ 51 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 2096 # text = IL-10 inhibited IFN-gamma-induced STAT activation without newly synthesized protein. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 IFN- IFN- SYM SYM _ _ _ _ SpaceAfter=No 6 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 STAT Stat NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 without without ADP IN _ _ _ _ _ 12 newly newly ADV RB _ _ _ _ _ 13 synthesized synthesize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 2097 # text = We further demonstrated that aspirin, but not dexamethasone, suppressed IFN-gamma-induced STAT activation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 aspirin aspirin NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 but but CCONJ CC _ _ _ _ _ 8 not not ADV RB _ _ _ _ _ 9 dexamethasone dexamethasone VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 IFN- IFN- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 STAT Stat NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2098 # text = Taken together, these results suggest that IL-10-activated STAT1 has a specificity in binding to the GAS-motif sequences, whereas IFN-gamma-activated STAT1 and STAT5 have a broader spectrum in binding to the GAS-motif sequences. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 STAT1 stat1 NOUN NN Number=Sing _ _ _ _ 14 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 specificity specificity NOUN NN Number=Sing _ _ _ _ 17 in in SCONJ IN _ _ _ _ _ 18 binding binding VERB VBG VerbForm=Ger _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 GAS gas NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 motif motif NOUN NN Number=Sing _ _ _ _ 24 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 whereas wherea SCONJ IN _ _ _ _ _ 27 IFN- IFN- NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 STAT1 stat1 PROPN NNP Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 STAT5 stat5 PROPN NNP Number=Sing _ _ _ _ 34 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 broader broader ADJ JJR Degree=Cmp _ _ _ _ 37 spectrum spectrum NOUN NN Number=Sing _ _ _ _ 38 in in SCONJ IN _ _ _ _ _ 39 binding bind VERB VBG VerbForm=Ger _ _ _ _ 40 to to ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 GAS gas NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 motif motif NOUN NN Number=Sing _ _ _ _ 45 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 2099 # text = This may explain the difference between IL-10 and IFN-gamma in biological activity, and the inhibitory effect of IL-10 on IFN-gamma activities. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 may may AUX MD VerbForm=Fin _ _ _ _ 3 explain explain VERB VB VerbForm=Inf _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 difference difference NOUN NN Number=Sing _ _ _ _ 6 between between ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 10 10 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 gamma gamma NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 biological biological ADJ JJ Degree=Pos _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 21 effect effect NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 10 10 NUM CD NumType=Card _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 gamma gamma NOUN NN Number=Sing _ _ _ _ 30 activities activity NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2100 # text = Document 003003130 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003130 003003130 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2101 # text = Protein kinase inhibitor H-7 blocks accumulation of unspliced mRNA of human T-cell leukemia virus type I (HTLV-I). 1 Protein protein NOUN NN Number=Sing _ _ _ _ 2 kinase kinase NOUN NN Number=Sing _ _ _ _ 3 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 4 H h NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 7 7 NUM CD NumType=Card _ _ _ _ 7 blocks block NOUN NNS Number=Plur _ _ _ _ 8 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 unspliced unspliced ADJ JJ Degree=Pos _ _ _ _ 11 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 17 virus virus NOUN NN Number=Sing _ _ _ _ 18 type type NOUN NN Number=Sing _ _ _ _ 19 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2102 # text = Rex, the post-transcriptional regulator of human T-cell leukemia virus type I (HTLV-I), is known to induce accumulation of the unspliced viral gag-pol mRNA. 1 Rex Rex PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 post post X AFX _ _ _ _ SpaceAfter=No 5 -transcriptional -transcriptional ADJ JJ Degree=Pos _ _ _ _ 6 regulator regulator NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 12 virus virus NOUN NN Number=Sing _ _ _ _ 13 type type NOUN NN Number=Sing _ _ _ _ 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 induce induce VERB VB VerbForm=Inf _ _ _ _ 25 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 unspliced unspliced ADJ JJ Degree=Pos _ _ _ _ 29 viral viral ADJ JJ Degree=Pos _ _ _ _ 30 gag gag NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 pol pol NOUN NN Number=Sing _ _ _ _ 33 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2103 # text = Rex is a phosphoprotein found in the cell nucleolus, whose function may be regulated by its localization and phosphorylation. 1 Rex Rex NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 phosphoprotein phosphoprotein NOUN NN Number=Sing _ _ _ _ 5 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 nucleolus nucleolus NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 12 function function NOUN NN Number=Sing _ _ _ _ 13 may may AUX MD VerbForm=Fin _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 localization localization NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2104 # text = We have examined the role of phosphorylation on Rex function by using a protein kinase inhibitor, H-7 [1-(5-isoquinolinyl-sulfonyl)-2-methylpiperazine]. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 Rex Rex NOUN NN Number=Sing _ _ _ _ 10 function function NOUN NN Number=Sing _ _ _ _ 11 by by SCONJ IN _ _ _ _ _ 12 using use VERB VBG VerbForm=Ger _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 kinase kinase NOUN NN Number=Sing _ _ _ _ 16 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 H h NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 7 7 NUM CD NumType=Card _ _ _ _ 21 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 1-( 1-( SYM NFP _ _ _ _ SpaceAfter=No 23 5-isoquinolinyl-sulfonyl 5-isoquinolinyl-sulfonyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 -methylpiperazine -methylpiperazine NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2105 # text = Treatment of an HTLV-I infected human T-cell line with H-7 blocked specifically accumulation of the unspliced gag-pol mRNA, resulting in the decreased Gag protein synthesis that corresponds with the decreased in vivo phosphorylation of Rex. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 HTLV HTLV NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 infected infect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 line line NOUN NN Number=Sing _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 H H NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 7 7 NUM CD NumType=Card _ _ _ _ 16 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 specifically specifically ADV RB _ _ _ _ _ 18 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 unspliced unspliced ADJ JJ Degree=Pos _ _ _ _ 22 gag gag NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 pol pol NOUN NN Number=Sing _ _ _ _ 25 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 resulting result VERB VBG VerbForm=Ger _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 decreased decreased VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 Gag Gag NOUN NN Number=Sing _ _ _ _ 32 protein protein NOUN NN Number=Sing _ _ _ _ 33 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 34 that that PRON WDT PronType=Rel _ _ _ _ 35 corresponds correspond VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 vivo vivo NOUN NN Number=Sing _ _ _ _ 41 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 Rex Rex PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 2106 # text = In contrast, other viral and cellular products have not been influenced by the level of H-7 used. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 other other ADJ JJ Degree=Pos _ _ _ _ 5 viral viral ADJ JJ Degree=Pos _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 8 products product NOUN NNS Number=Plur _ _ _ _ 9 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 12 influenced influence VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 level level NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 H H NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 7 7 NUM CD NumType=Card _ _ _ _ 20 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2107 # text = Therefore, the phosphorylation of Rex is required for the viral RNA partition of HTLV-I. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 Rex Rex PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 viral viral ADJ JJ Degree=Pos _ _ _ _ 12 RNA RNA NOUN NN Number=Sing _ _ _ _ 13 partition partition NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2108 # text = Document 003003133 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003133 003003133 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2109 # text = G(Anh)MTetra, a natural bacterial cell wall breakdown product, induces interleukin-1 beta and interleukin-6 expression in human monocytes. 1 G G PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 Anh Anh PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 5 MTetra MTetra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 natural natural ADJ JJ Degree=Pos _ _ _ _ 9 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 wall wall NOUN NN Number=Sing _ _ _ _ 12 breakdown breakdown NOUN NN Number=Sing _ _ _ _ 13 product product NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 beta beta NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 6 6 NUM CD NumType=Card _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2110 # text = A study of the molecular mechanisms involved in inflammatory cytokine expression [published erratum appears in J Biol Chem 1994 Jun 17;269(24):16983] 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 6 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 7 involved involve ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 10 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 published publish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 erratum erratum NOUN NN Number=Sing _ _ _ _ 15 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 J j PROPN NNP Number=Sing _ _ _ _ 18 Biol Biol PROPN NNP Number=Sing _ _ _ _ 19 Chem Chem PROPN NNP Number=Sing _ _ _ _ 20 1994 1994 NUM CD NumType=Card _ _ _ _ 21 Jun Jun PROPN NNP Number=Sing _ _ _ _ 22 17;269 17;269 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 24) 24) SYM NFP _ _ _ _ SpaceAfter=No 25 :16983 :16983 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 2111 # text = It is believed that induction of cytokine expression by bacterial cell wall components plays a role in the development and course of sepsis. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 believed believe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 induction induction NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 wall wall NOUN NN Number=Sing _ _ _ _ 13 components component NOUN NNS Number=Plur _ _ _ _ 14 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 role role NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 development development NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 course course NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 sepsis sepsis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2112 # text = However, most attention has been focused on lipopolysaccharide (LPS). 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 most most ADJ JJS Degree=Sup _ _ _ _ 4 attention attention NOUN NN Number=Sing _ _ _ _ 5 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 7 focused focus VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 LPS LPS INTJ UH _ _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 2113 # text = We studied the ability of N-acetylglucosaminyl-1,6-anhydro-N-acetylmuramyl-L-alanyl-D- isoglutamyl-m-diaminopimelyl-D-alanine (G(Anh)MTetra), a naturally occurring breakdown product of peptidoglycan that is produced by soluble lytic transglycosylase of Escherichia coli, to induce cytokine expression in human monocytes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 ability ability NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 N-acetylglucosaminyl N-acetylglucosaminyl ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 -1,6-anhydro-N-acetylmuramyl-L- -1,6-anhydro-N-acetylmuramyl-L- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 alanyl alanyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 -D -d NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ _ 11 isoglutamyl isoglutamyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 m-diaminopimelyl m-diaminopimelyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 -D- -d- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 alanine alanine NUM CD NumType=Card _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 G g NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 Anh Anh PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 MTetra MTetra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 naturally naturally NOUN NN Number=Sing _ _ _ _ 26 occurring occurre VERB VBG VerbForm=Ger _ _ _ _ 27 breakdown breakdown ADP IN _ _ _ _ _ 28 product product NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 peptidoglycan peptidoglycan NOUN NN Number=Sing _ _ _ _ 31 that that PRON WDT PronType=Rel _ _ _ _ 32 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 produced produce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 36 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 37 transglycosylase transglycosylase NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 Escherichia Escherichia PROPN NNP Number=Sing _ _ _ _ 40 coli coli NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 to to PART TO _ _ _ _ _ 43 induce induce VERB VB VerbForm=Inf _ _ _ _ 44 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 45 expression expression NOUN NN Number=Sing _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 human human ADJ JJ Degree=Pos _ _ _ _ 48 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 2114 # text = G(Anh)MTetra was found to strongly induce interleukin (IL)-1 beta and IL-6 mRNA expression after 2 h and IL-1 beta and IL-6 protein secretion after 48 h of activation. 1 G G PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 Anh Anh PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 5 MTetra MTetra PROPN NNP Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 strongly strongly ADV RB _ _ _ _ _ 10 induce induce VERB VB VerbForm=Inf _ _ _ _ 11 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 - - SYM SYM _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 beta beta NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 6 6 NUM CD NumType=Card _ _ _ _ 22 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 after after ADP IN _ _ _ _ _ 25 2 2 NUM CD NumType=Card _ _ _ _ 26 h h NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 beta beta NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 6 6 NUM CD NumType=Card _ _ _ _ 36 protein protein NOUN NN Number=Sing _ _ _ _ 37 secretion secretion NOUN NN Number=Sing _ _ _ _ 38 after after ADP IN _ _ _ _ _ 39 48 48 NUM CD NumType=Card _ _ _ _ 40 h h NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 2115 # text = The increase in mRNA accumulation was at least partly due to an increase in the transcription rates of the respective genes and was accompanied by a strong induction of nuclear factor-kappa B and activator protein-1 transcription factor expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 increase increase NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 5 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 at at ADV RB _ _ _ _ _ 8 least least ADV RBS Degree=Sup _ _ _ _ 9 partly partly ADV RB _ _ _ _ _ 10 due due ADP IN _ _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 increase increase NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 rates rate NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 respective respective ADJ JJ Degree=Pos _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 strong strong ADJ JJ Degree=Pos _ _ _ _ 28 induction induction NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 31 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappa kappa NOUN NN Number=Sing _ _ _ _ 34 B b NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 activator activator NOUN NN Number=Sing _ _ _ _ 37 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT , _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ _ 40 transcription transcription NOUN NN Number=Sing _ _ _ _ 41 factor factor NOUN NN Number=Sing _ _ _ _ 42 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 2116 # text = Experiments using inhibitors of protein kinase C, protein kinase A, and tyrosine kinase-dependent pathways revealed that G(Anh)MTetra-induced IL-1 beta and IL-6 mRNA expression involves activation of an H7-inhibitable pathway. 1 Experiments Experiment NOUN NNS Number=Plur _ _ _ _ 2 using use VERB VBG VerbForm=Ger _ _ _ _ 3 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 kinase kinase NOUN NN Number=Sing _ _ _ _ 7 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 kinase kinase NOUN NN Number=Sing _ _ _ _ 11 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 15 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 18 pathways pathway NOUN NNS Number=Plur _ _ _ _ 19 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 G G PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 Anh Anh PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 MTetra MTetra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 beta beta NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 6 6 NUM CD NumType=Card _ _ _ _ 36 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 37 expression expression NOUN NN Number=Sing _ _ _ _ 38 involves involf VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 activation activation NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 H7 H7 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 -inhibitable -inhibitable ADJ JJ Degree=Pos _ _ _ _ 44 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 2117 # text = By using the protein synthesis inhibitor cycloheximide, it was shown that G(Anh)MTetra-induced IL-6 mRNA expression depends on the synthesis of new protein, whereas G(Anh)MTetra-induced IL-1 beta mRNA accumulation does not. 1 By by SCONJ IN _ _ _ _ _ 2 using use VERB VBG VerbForm=Ger _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 6 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 7 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 G G VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 Anh Anh PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 MTetra MTetra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 6 6 NUM CD NumType=Card _ _ _ _ 23 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 depends depend VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 new new ADJ JJ Degree=Pos _ _ _ _ 31 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 whereas whereas SCONJ IN _ _ _ _ _ 34 G G VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 Anh Anh PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 38 MTetra MTetra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 1 1 NUM CD NumType=Card _ _ _ _ 44 beta beta NOUN NN Number=Sing _ _ _ _ 45 mRNA mRNa SYM SYM _ _ _ _ _ 46 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 47 does do VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 48 not not PART RB _ _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 2118 # text = When responses to G(Anh)MTetra were compared with those to LPS and muramyldipeptide (MDP), it was found that the optimal response to G(Anh)MTetra induction was similar to that of LPS but significantly higher than the response to MDP. 1 When when ADV WRB PronType=Int _ _ _ _ 2 responses response NOUN NNS Number=Plur _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 G G PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 Anh Anh PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 MTetra MTetra PROPN NNP Number=Sing _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 compared compare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 LPS LPS NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 muramyldipeptide muramyldipeptide NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 MDP MDP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 27 response response NOUN NN Number=Sing _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 G G PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 Anh Anh PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 MTetra MTetra PROPN NNP Number=Sing _ _ _ _ 34 induction induction NOUN NN Number=Sing _ _ _ _ 35 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 36 similar similar ADJ JJ Degree=Pos _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 LPS LPS NOUN NN Number=Sing _ _ _ _ 41 but but CCONJ CC _ _ _ _ _ 42 significantly significantly ADV RB _ _ _ _ _ 43 higher higher ADJ JJR Degree=Cmp _ _ _ _ 44 than than ADP IN _ _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 response response NOUN NN Number=Sing _ _ _ _ 47 to to ADP IN _ _ _ _ _ 48 MDP MDP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 2119 # text = Furthermore, maximal G(Anh)MTetra-induced IL-1 beta and IL-6 mRNA expression could be enhanced by co-stimulation with LPS or MDP, suggesting that different receptors and/or transduction pathways were involved. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 4 G G NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 Anh Anh PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 MTetra MTetra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 beta beta NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 6 6 NUM CD NumType=Card _ _ _ _ 19 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 could could AUX MD VerbForm=Fin _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 co-stimulation co-stimulation NOUN NN Number=Sing _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 LPS Lps PROPN NNP Number=Sing _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 MDP Mdp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 32 that that SCONJ IN _ _ _ _ _ 33 different different ADJ JJ Degree=Pos _ _ _ _ 34 receptors receptor NOUN NNS Number=Plur _ _ _ _ 35 and and CCONJ CC _ _ _ _ SpaceAfter=No 36 / / PUNCT , _ _ _ _ SpaceAfter=No 37 or or CCONJ CC _ _ _ _ _ 38 transduction transduction NOUN NN Number=Sing _ _ _ _ 39 pathways pathway NOUN NNS Number=Plur _ _ _ _ 40 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 41 involved involved ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 2120 # text = These results indicate that G(Anh)MTetra induces IL-1 beta and IL-6 expression in human monocytes suggesting a possible role for G(Anh)MTetra in the release of cytokines during sepsis. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 G G PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 Anh Anh PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 MTetra MTetra PROPN NNP Number=Sing _ _ _ _ 10 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 beta beta NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 6 6 NUM CD NumType=Card _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 23 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 possible possible ADJ JJ Degree=Pos _ _ _ _ 26 role role NOUN NN Number=Sing _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 G G PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 Anh Anh PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 MTetra MTetra PROPN NNP Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 release release NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 38 during during ADP IN _ _ _ _ _ 39 sepsis. sepsis. NOUN NN Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2121 # text = Document 003003134 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003134 003003134 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2122 # text = C/EBP beta in rheumatoid arthritis: correlation with inflammation, not disease specificity. 1 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 / / PUNCT , _ _ _ _ SpaceAfter=No 3 EBP EBP PROPN NNP Number=Sing _ _ _ _ 4 beta beta NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 rheumatoid rheumatoid ADJ JJ Degree=Pos _ _ _ _ 7 arthritis arthritis NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 : : PUNCT : _ _ _ _ _ 9 correlation correlation NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 not not ADV RB _ _ _ _ _ 14 disease disease NOUN NN Number=Sing _ _ _ _ 15 specificity specificity NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2123 # text = Rheumatoid arthritis synovial tissue was examined and compared with osteoarthritis tissue for the presence of the nuclear transcription factor C/EBP beta (NF-IL-6). 1 Rheumatoid Rheumatoid VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 arthritis arthritis DET DT Number=Sing|PronType=Dem _ _ _ _ 3 synovial synovial ADJ JJ Degree=Pos _ _ _ _ 4 tissue tissue NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 osteoarthritis osteoarthritis DET DT Number=Sing|PronType=Dem _ _ _ _ 11 tissue tissue NOUN NN Number=Sing _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 presence presence NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 C/ Cith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 21 EBP EBP PROPN NNP Number=Sing _ _ _ _ 22 beta beta PROPN NNP Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2124 # text = The region (lining or sublining), cell type, and subcellular distribution (cytoplasmic or nuclear) of the expression of C/EBP beta was characterized. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 region region NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 lining lin NOUN NN Number=Sing _ _ _ _ 5 or or CCONJ CC _ _ _ _ _ 6 sublining sublin NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 subcellular subcelular ADJ JJ Degree=Pos _ _ _ _ 14 distribution distribution NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 / / PUNCT , _ _ _ _ SpaceAfter=No 26 EBP EBP PROPN NNP Number=Sing _ _ _ _ 27 beta beta PROPN NNP Number=Sing _ _ _ _ 28 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 29 characterized characterize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2125 # text = Rheumatoid arthritis synovial fluid and blood and normal peripheral blood were also examined. 1 Rheumatoid Rheumatoid VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 arthritis arthritis DET DT Number=Sing|PronType=Dem _ _ _ _ 3 synovial synovial ADJ JJ Degree=Pos _ _ _ _ 4 fluid fluid NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 blood blood NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 normal normal ADJ JJ Degree=Pos _ _ _ _ 9 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 10 blood blood NOUN NN Number=Sing _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 also also ADV RB _ _ _ _ _ 13 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 2126 # text = C/EBP beta was detected in the synovial lining and in sublining cells of synovial tissue from patients with both rheumatoid and osteoarthritis. 1 C/ C/ SYM NFP _ _ _ _ SpaceAfter=No 2 EBP EBP PROPN NNP Number=Sing _ _ _ _ 3 beta beta PROPN NNP Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 synovial synovial ADJ JJ Degree=Pos _ _ _ _ 9 lining lining NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 sublining sublin VERB VBG VerbForm=Ger _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 synovial synovial ADJ JJ Degree=Pos _ _ _ _ 16 tissue tissue NOUN NN Number=Sing _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 patients patient NOUN NNS Number=Plur _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 both both CCONJ CC _ _ _ _ _ 21 rheumatoid rheumatoid NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 osteoarthritis osteoarthritis NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2127 # text = A significant (P < 0.001 and < 0.05, respectively) increase in the percentage of cells with nuclear staining was seen in the lining layer, compared to cells in the sublining region, in rheumatoid and osteoarthritis. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 significant significant ADJ JJ Degree=Pos _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 P p NOUN NN Number=Sing _ _ _ _ 5 < < PUNCT -LRB- _ _ _ _ _ 6 0.001 0.001 NUM CD NumType=Card _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 < < PUNCT -LRB- _ _ _ _ _ 9 0.05 0.05 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 increase increase NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 percentage percentage NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 staining staining NOUN NN Number=Sing _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 lining lining NOUN NN Number=Sing _ _ _ _ 27 layer layer NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 sublining sublining NOUN NN Number=Sing _ _ _ _ 35 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 rheumatoid rheumatoid NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 osteoarthritis osteoarthritis NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 2128 # text = In both diseases a strong correlation (r = 0.79, P < 0.001) was observed between the percentage of cells in the synovial lining that were positive for nuclear C/EBP beta and lining cell depth. 1 In in ADP IN _ _ _ _ _ 2 both both DET DT _ _ _ _ _ 3 diseases diseasis NOUN NNS Number=Plur _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 strong strong ADJ JJ Degree=Pos _ _ _ _ 6 correlation correlation NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 r be NOUN NN Number=Sing _ _ _ _ 9 = = SYM SYM _ _ _ _ _ 10 0.79 0.79 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 P P NOUN NN Number=Sing _ _ _ _ 13 < < PUNCT -LRB- _ _ _ _ _ 14 0.001 0.001 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 between between ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 percentage percentage NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 synovial synovial ADJ JJ Degree=Pos _ _ _ _ 26 lining lining NOUN NN Number=Sing _ _ _ _ 27 that that PRON WDT PronType=Rel _ _ _ _ 28 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 positive positive ADJ JJ Degree=Pos _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 32 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 / / PUNCT , _ _ _ _ SpaceAfter=No 34 EBP EBP PROPN NNP Number=Sing _ _ _ _ 35 beta beta NOUN NN Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 lining lin VERB VBG VerbForm=Ger _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 depth depth NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 2129 # text = Two-color immunohistochemistry demonstrated that both macrophages and fibroblast-like synoviocytes were positive for nuclear C/EBP beta. 1 Two two NUM CD NumType=Card _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 color color NOUN NN Number=Sing _ _ _ _ 4 immunohistochemistry immunohistochemistry NOUN NN Number=Sing _ _ _ _ 5 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 both both DET DT _ _ _ _ _ 8 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 fibroblast fibroblast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 like like SCONJ IN _ _ _ _ _ 13 synoviocytes synoviocyte NOUN NNS Number=Plur _ _ _ _ 14 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 positive positive ADJ JJ Degree=Pos _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 C/ c/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 EBP EBP NOUN NN Number=Sing _ _ _ _ 20 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2130 # text = The presence of C/EBP beta was confirmed by immunohistochemistry and Western blot analysis with isolated synovial fibroblasts. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 presence presence NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 EBP EBP PROPN NNP Number=Sing _ _ _ _ 7 beta beta PROPN NNP Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 confirmed confirm VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 immunohistochemistry immunohistochemistry ADJ JJ Degree=Pos _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 Western western ADJ JJ Degree=Pos _ _ _ _ 14 blot blot NOUN NN Number=Sing _ _ _ _ 15 analysis analysis NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 synovial synovial ADJ JJ Degree=Pos _ _ _ _ 19 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2131 # text = Nuclear C/EBP beta was also detected in rheumatoid synovial fluid monocytes/macrophages, but not in lymphocytes or neutrophils. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 C/ c/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 EBP EBP PROPN NNP Number=Sing _ _ _ _ 4 beta beta PROPN NNP Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 rheumatoid rheumatoid ADJ JJ Degree=Pos _ _ _ _ 10 synovial synovial ADJ JJ Degree=Pos _ _ _ _ 11 fluid fluid NOUN NN Number=Sing _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 / / PUNCT , _ _ _ _ SpaceAfter=No 14 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 not not ADV RB _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2132 # text = Western blot analysis confirmed the presence of C/EBP beta in these cells. 1 Western western ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 confirmed confirm VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 presence presence NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 / / PUNCT , _ _ _ _ SpaceAfter=No 10 EBP EBP PROPN NNP Number=Sing _ _ _ _ 11 beta beta NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 2133 # text = The intensity of C/EBP beta staining was greater (P < 0.001) in synovial fluid monocytes than in those from normal or rheumatoid peripheral blood. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 intensity intensity NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 EBP EBP PROPN NNP Number=Sing _ _ _ _ 7 beta beta NOUN NN Number=Sing _ _ _ _ 8 staining staining VERB VBG VerbForm=Ger _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 greater greater ADJ JJR Degree=Cmp _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 P p NOUN NN Number=Sing _ _ _ _ 13 < < PUNCT -LRB- _ _ _ _ _ 14 0.001 0.001 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 synovial synovial ADJ JJ Degree=Pos _ _ _ _ 18 fluid fluid NOUN NN Number=Sing _ _ _ _ 19 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 20 than than ADP IN _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 normal normal ADJ JJ Degree=Pos _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 rheumatoid rheumatoid ADJ JJ Degree=Pos _ _ _ _ 27 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 28 blood blood NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2134 # text = In conclusion, the enhanced nuclear staining for C/EBP beta in the synovial lining, compared to the sublining, suggesting activation in the lining, and the positive correlation of lining layer depth with the percentage of cells in the lining positive for nuclear C/EBP beta, suggest a potential role for C/EBP beta in chronic inflammation. 1 In in ADP IN _ _ _ _ _ 2 conclusion conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 nuclear nuclear NOUN NN Number=Sing _ _ _ _ 7 staining staining VERB VBG VerbForm=Ger _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 EBP EBP PROPN NNP Number=Sing _ _ _ _ 12 beta beta NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 synovial synovial ADJ JJ Degree=Pos _ _ _ _ 16 lining lining NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 sublining sublining NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 lining lining NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 positive positive ADJ JJ Degree=Pos _ _ _ _ 32 correlation correlation NOUN NN Number=Sing _ _ _ _ 33 of of SCONJ IN _ _ _ _ _ 34 lining lin VERB VBG VerbForm=Ger _ _ _ _ 35 layer layer NOUN NN Number=Sing _ _ _ _ 36 depth depth NOUN NN Number=Sing _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 percentage percentage NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 lining lining NOUN NN Number=Sing _ _ _ _ 45 positive positive ADJ JJ Degree=Pos _ _ _ _ 46 for for ADP IN _ _ _ _ _ 47 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 48 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 / / PUNCT , _ _ _ _ SpaceAfter=No 50 EBP EBP PROPN NNP Number=Sing _ _ _ _ 51 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 suggest suggest VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 54 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 55 potential potential ADJ JJ Degree=Pos _ _ _ _ 56 role role NOUN NN Number=Sing _ _ _ _ 57 for for ADP IN _ _ _ _ _ 58 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 59 / / PUNCT , _ _ _ _ SpaceAfter=No 60 EBP EBP PROPN NNP Number=Sing _ _ _ _ 61 beta beta NOUN NN Number=Sing _ _ _ _ 62 in in ADP IN _ _ _ _ _ 63 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 64 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 65 . . PUNCT . _ _ _ _ _ # sent_id = 2135 # text = The regulation of the production or activity of C/EBP beta, to inhibit inflammatory mediator expression by synovial macrophages and fibroblasts, offers a novel approach to therapeutic intervention. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 production production NOUN NN Number=Sing _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 EBP EBP PROPN NNP Number=Sing _ _ _ _ 12 beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 16 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 17 mediator mediator NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 synovial synovial ADJ JJ Degree=Pos _ _ _ _ 21 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 offers offer VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 novel novel NOUN NN Number=Sing _ _ _ _ 28 approach approach NOUN NN Number=Sing _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 31 intervention intervention NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2136 # text = Document 003003138 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003138 003003138 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2137 # text = The activation of the Jak-STAT 1 signaling pathway by IL-5 in eosinophils. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 Jak- Jak- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 STAT Stat NOUN NN Number=Sing _ _ _ _ 7 1 1 NUM CD NumType=Card _ _ _ _ 8 signaling signal NOUN NN Number=Sing _ _ _ _ 9 pathway pathway NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 5 5 NUM CD NumType=Card _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2138 # text = The intracellular signal transduction of IL-5 in eosinophils is unknown. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 3 signal signal NOUN NN Number=Sing _ _ _ _ 4 transduction transduction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 5 5 NUM CD NumType=Card _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 2139 # text = The objective of this study was to investigate the involvement of the newly discovered Jak-STAT pathway in the IL-5 signal transduction mechanism. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 objective objective NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 study study NOUN NN Number=Sing _ _ _ _ 6 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 involvement involvement NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 newly newly ADV RB _ _ _ _ _ 14 discovered discover VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 Jak Jak PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 STAT STAT PROPN NNP Number=Sing _ _ _ _ 18 pathway pathway NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 5 5 NUM CD NumType=Card _ _ _ _ 24 signal signal NOUN NN Number=Sing _ _ _ _ 25 transduction transduction NOUN NN Number=Sing _ _ _ _ 26 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2140 # text = Eosinophils were purified from peripheral blood by discontinuous 1 Eosinophils Eosinophil NOUN NNS Number=Plur _ _ _ _ 2 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 purified purify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 6 blood blood NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 discontinuous discontinuous ADJ JJ Degree=Pos _ _ _ _ # sent_id = 2141 # text = Percoll gradients and stimulated with IL-5. 1 Percoll Percoll ADJ JJ Degree=Pos _ _ _ _ 2 gradients gradient NOUN NNS Number=Plur _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 2142 # text = The involvement of Jak 2 was investigated by immunoprecipitation followed by immunoblotting for tyrosine phosphorylation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 involvement involvement NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Jak Jak PROPN NNP Number=Sing _ _ _ _ 5 2 2 NUM CD NumType=Card _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 immunoprecipitation immunoprecipitation NOUN NN Number=Sing _ _ _ _ 10 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by SCONJ IN _ _ _ _ _ 12 immunoblotting immunoblott VERB VBG VerbForm=Ger _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 15 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2143 # text = The activation of Jak 2 was studied by autophosphorylation of the immunoprecipitated kinase. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Jak Jak PROPN NNP Number=Sing _ _ _ _ 5 2 2 NUM CD NumType=Card _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 autophosphorylation autophosphorylation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 immunoprecipitated immunoprecipitate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 2144 # text = Jak 2 was tyrosine phosphorylated within 1 to 3 min after stimulation of eosinophils with IL-5. 1 Jak Jak PROPN NNP Number=Sing _ _ _ _ 2 2 2 NUM CD NumType=Card _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 tyrosine tyrosine PRON PRP _ _ _ _ _ 5 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 within within ADP IN _ _ _ _ _ 7 1 1 NUM CD NumType=Card _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 3 3 NUM CD NumType=Card _ _ _ _ 10 min min NOUN NNS Number=Plur _ _ _ _ 11 after after ADP IN _ _ _ _ _ 12 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2145 # text = Further, the immunoprecipitated Jak 2 obtained from IL-5-stimulated cells underwent autophosphorylation. 1 Further further ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 immunoprecipitated immunoprecipitate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 Jak Jak PROPN NNP Number=Sing _ _ _ _ 6 2 2 NUM CD NumType=Card _ _ _ _ 7 obtained obtaine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 underwent underwent ADJ JJ Degree=Pos _ _ _ _ 16 autophosphorylation autophosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2146 # text = Jak 2 coprecipitated with the beta-subunit of the IL-5 receptor, suggesting a physical association of the kinase with the receptor. 1 Jak Jak PROPN NNP Number=Sing _ _ _ _ 2 2 2 NUM CD NumType=Card _ _ _ _ 3 coprecipitated coprecipitate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 subunit subunit NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 5 5 NUM CD NumType=Card _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 physical physical ADJ JJ Degree=Pos _ _ _ _ 19 association association NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 kinase kinase NOUN NN Number=Sing _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2147 # text = The nuclear factor STAT-1 (p91) was investigated by immunoprecipitation followed by immunoblotting for tyrosine phosphorylation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 STAT Stat NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT : _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 p91 p91 NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 immunoprecipitation immunoprecipitation NOUN NN Number=Sing _ _ _ _ 14 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by SCONJ IN _ _ _ _ _ 16 immunoblotting immunoblott VERB VBG VerbForm=Ger _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 19 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2148 # text = STAT-1 was tyrosine phosphorylated within 15 min of IL-5 stimulation. 1 STAT Stat NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 tyrosine tyrosine ADV RB _ _ _ _ _ 6 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 within within ADP IN _ _ _ _ _ 8 15 15 NUM CD NumType=Card _ _ _ _ 9 min min NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 5 5 NUM CD NumType=Card _ _ _ _ 14 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 2149 # text = The presence of STAT-1 in the nuclear extract was studied by electrophoretic mobility shift assay. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 presence presence NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 STAT STAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 extract extract NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 15 mobility mobility NOUN NN Number=Sing _ _ _ _ 16 shift shift NOUN NN Number=Sing _ _ _ _ 17 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2150 # text = IL-5 induced two proteins that bound to the gamma-activating sequence. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 5 5 NUM CD NumType=Card _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 two two NUM CD NumType=Card _ _ _ _ 6 proteins protein NOUN NNS Number=Plur _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 bound bound VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 activating activating VERB VBG VerbForm=Ger _ _ _ _ 14 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 2151 # text = In the presence of an anti-STAT-1 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 presence presence NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 anti-STAT anti-stat ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 -1 -1 NUM CD NumType=Card _ _ _ _ # sent_id = 2152 # text = Ab, the band was supershifted. 1 Ab Ab ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 band band NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 supershifted supershift VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ _ # sent_id = 2153 # text = Thus, we demonstrated that IL-5 activated the Jak 2-STAT 1 signaling pathway in eosinophils. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 5 5 NUM CD NumType=Card _ _ _ _ 9 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 Jak Jak PROPN NNP Number=Sing _ _ _ _ 12 2- 2- SYM NFP _ _ _ _ SpaceAfter=No 13 STAT Stat NOUN NN Number=Sing _ _ _ _ 14 1 1 NUM CD NumType=Card _ _ _ _ 15 signaling signale NOUN NN Number=Sing _ _ _ _ 16 pathway pathway NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2154 # text = We speculate that the Jak 2-STAT 1 pathway may be involved in the activation of IL-5-inducible genes in eosinophils. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 speculate speculate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 Jak Jak PROPN NNP Number=Sing _ _ _ _ 6 2- 2- SYM NFP _ _ _ _ SpaceAfter=No 7 STAT Stat NOUN NN Number=Sing _ _ _ _ 8 1 1 NUM CD NumType=Card _ _ _ _ 9 pathway pathway NOUN NN Number=Sing _ _ _ _ 10 may may AUX MD VerbForm=Fin _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 involved involved ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 22 genes gene NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2155 # text = Document 003003139 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003139 003003139 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2156 # text = Retinoid X receptor (RXR) agonist-induced activation of dominant-negative RXR-retinoic acid receptor alpha403 heterodimers is developmentally regulated during myeloid differentiation. 1 Retinoid Retinoid ADJ JJ Degree=Pos _ _ _ _ 2 X x NOUN NN Number=Sing _ _ _ _ 3 receptor receptor NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 RXR RXR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 agonist agonist NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 dominant dominant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 negative negative ADJ JJ Degree=Pos _ _ _ _ 15 RXR Rxr NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 18 acid acid ADJ JJ Degree=Pos _ _ _ _ 19 receptor receptor NOUN NN Number=Sing _ _ _ _ 20 alpha403 alpha403 NOUN NN Number=Sing _ _ _ _ 21 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 developmentally developmentally ADV RB _ _ _ _ _ 24 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 during during ADP IN _ _ _ _ _ 26 myeloid myeloid VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2157 # text = The multiple biologic activities of retinoic acid (RA) are mediated through RAR and retinoid X receptor (RXR) nuclear receptors that interact with specific DNA target sequences as heterodimers (RXR-RAR) or homodimers (RXR-RXR). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 3 biologic biologic NOUN NN Number=Sing _ _ _ _ 4 activities activity NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 7 acid acid NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 RA Ra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 through through ADP IN _ _ _ _ _ 14 RAR RAR PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 retinoid retinoid VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 X x ADP IN _ _ _ _ _ 18 receptor receptor NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 RXR RXR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 23 receptors receptor NOUN NNS Number=Plur _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 interact interact VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 specific specific ADJ JJ Degree=Pos _ _ _ _ 28 DNA dna NOUN NN Number=Sing _ _ _ _ 29 target target NOUN NN Number=Sing _ _ _ _ 30 sequences sequence NOUN NNS Number=Plur _ _ _ _ 31 as as ADP IN _ _ _ _ _ 32 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 RXR Rxr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 RAR Rar PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 or or CCONJ CC _ _ _ _ _ 39 homodimers homodimer NOUN NNS Number=Plur _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 RXR- RXR- X AFX _ _ _ _ SpaceAfter=No 42 RXR Rxr NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 2158 # text = RA receptor activation appears critical to regulating important aspects of hematopoiesis, since transducing a COOH-terminally truncated RARalpha exhibiting dominant-negative activity (RARalpha403) into normal mouse bone marrow generates hematopoietic growth factor-dependent cell lines frozen at the multipotent progenitor (EML) or committed promyelocyte (MPRO) stages. 1 RA Ra NOUN NN Number=Sing _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 critical critical ADJ JJ Degree=Pos _ _ _ _ 6 to to SCONJ IN _ _ _ _ _ 7 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 8 important important ADJ JJ Degree=Pos _ _ _ _ 9 aspects aspect NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 hematopoiesis hematopoiesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 since since SCONJ IN _ _ _ _ _ 14 transducing transduce VERB VBG VerbForm=Ger _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 COOH COOh NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 terminally terminally ADV RB _ _ _ _ _ 19 truncated truncate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 RARalpha RARalpha PROPN NNP Number=Sing _ _ _ _ 21 exhibiting exhibite VERB VBG VerbForm=Ger _ _ _ _ 22 dominant dominant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 negative negative ADJ JJ Degree=Pos _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 RARalpha403 RARalpha403 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 into into ADP IN _ _ _ _ _ 30 normal normal ADJ JJ Degree=Pos _ _ _ _ 31 mouse mouse NOUN NN Number=Sing _ _ _ _ 32 bone bone NOUN NN Number=Sing _ _ _ _ 33 marrow marrow NOUN NN Number=Sing _ _ _ _ 34 generates generate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 36 growth growth NOUN NN Number=Sing _ _ _ _ 37 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 lines line NOUN NNS Number=Plur _ _ _ _ 42 frozen freeze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 at at ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 multipotent multipotent ADJ JJ Degree=Pos _ _ _ _ 46 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 47 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 48 EML EML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 ) ) PUNCT -RRB- _ _ _ _ _ 50 or or CCONJ CC _ _ _ _ _ 51 committed commit ADJ JJ Degree=Pos _ _ _ _ 52 promyelocyte promyelocyte NOUN NN Number=Sing _ _ _ _ 53 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 54 MPRO MPRO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 55 ) ) PUNCT -RRB- _ _ _ _ _ 56 stages stage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 2159 # text = Nevertheless, relatively high, pharmacological concentrations of RA (1 to 10 &mgr;M) overcome these differentiation blocks and induce terminal granulocytic differentiation of the MPRO promyelocytes while potentiating interleukin-3 (IL-3)-induced commitment of EML cells to the granulocyte/monocyte lineage. 1 Nevertheless nevertheless ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 relatively relatively ADV RB _ _ _ _ _ 4 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 pharmacological pharmacological ADJ JJ Degree=Pos _ _ _ _ 7 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 RA RA PROPN NNP Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 10 10 NUM CD NumType=Card _ _ _ _ 14 & & CCONJ CC _ _ _ _ SpaceAfter=No 15 mgr mgr NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ; ; PUNCT , _ _ _ _ SpaceAfter=No 17 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 overcome overcome VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 21 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 22 blocks block NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 induce induce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 26 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 27 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 MPRO MPRO PROPN NNP Number=Sing _ _ _ _ 31 promyelocytes promyelocyte NOUN NNS Number=Plur _ _ _ _ 32 while while SCONJ IN _ _ _ _ _ 33 potentiating potentiat VERB VBG VerbForm=Ger _ _ _ _ 34 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 3 3 NUM CD NumType=Card _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 commitment commitment NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 EML EML ADJ JJ Degree=Pos _ _ _ _ 47 cells cell NOUN NNS Number=Plur _ _ _ _ 48 to to ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 / / PUNCT , _ _ _ _ SpaceAfter=No 52 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 53 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 2160 # text = In the present study, we utilized RXR- and RAR-specific agonists and antagonists to determine how RA overcomes the dominant-negative activity of the truncated RARalpha in these different myeloid developmental stages. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 utilized utilize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 RXR RXR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 RAR- RAR- X GW _ _ _ _ SpaceAfter=No 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 agonists agonist NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 antagonists antagonist NOUN NNS Number=Plur _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 determine determine VERB VB VerbForm=Inf _ _ _ _ 18 how how ADV WRB PronType=Int _ _ _ _ 19 RA RA PROPN NNP Number=Sing _ _ _ _ 20 overcomes overcome VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 dominant dominant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 negative negative ADJ JJ Degree=Pos _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 truncated truncate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 RARalpha RARalpha PROPN NNP Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 32 different different ADJ JJ Degree=Pos _ _ _ _ 33 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 34 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 35 stages stage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 2161 # text = Unexpectedly, we observed that an RXR-specific, rather than an RAR-specific, agonist induces terminal granulocytic differentiation of MPRO promyelocytes, and this differentiation is associated with activation of DNA response elements corresponding to RAR-RXR heterodimers rather than RXR-RXR homodimers. 1 Unexpectedly unexpectedly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 RXR-specific RXR-specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 rather rather ADV RB _ _ _ _ _ 10 than than ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 RAR- rar- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 agonist agonist ADJ JJ Degree=Pos _ _ _ _ 16 induces induces NOUN NNS Number=Plur _ _ _ _ 17 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 18 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 19 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 MPRO MPRO ADJ JJ Degree=Pos _ _ _ _ 22 promyelocytes promyelocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 26 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 DNA dna NOUN NN Number=Sing _ _ _ _ 33 response response NOUN NN Number=Sing _ _ _ _ 34 elements element NOUN NNS Number=Plur _ _ _ _ 35 corresponding correspond VERB VBG VerbForm=Ger _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 RAR RAR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 RXR RXR PROPN NNP Number=Sing _ _ _ _ 40 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 41 rather rather ADV RB _ _ _ _ _ 42 than than ADP IN _ _ _ _ _ 43 RXR RXR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 RXR RXR PROPN NNP Number=Sing _ _ _ _ 46 homodimers homodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 2162 # text = This RXR agonist activity is blocked by RAR-specific antagonists, suggesting extensive cross-talk between the partners of the RXR -RARalpha403 heterodimer. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 RXR Rxr NOUN NN Number=Sing _ _ _ _ 3 agonist agonist NOUN NN Number=Sing _ _ _ _ 4 activity activity NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 RAR- RAR- X AFX _ _ _ _ SpaceAfter=No 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 antagonists antagonist NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 13 extensive extensive ADJ JJ Degree=Pos _ _ _ _ 14 cross-talk cross-talk NOUN NN Number=Sing _ _ _ _ 15 between between ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 partners partner NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 RXR Rxr PROPN NNP Number=Sing _ _ _ _ 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 RARalpha403 RARalpha403 NUM CD NumType=Card _ _ _ _ 23 heterodimer heterodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2163 # text = In contrast, in the more immature, multipotent EML cells we observed that this RXR-specific agonist is inactive either in potentiating IL-3-mediated commitment of EML cells to the granulocyte lineage or in transactivating RAR-RXR response elements. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 more more ADV RBR _ _ _ _ _ 7 immature immature ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 multipotent multipotent ADJ JJ Degree=Pos _ _ _ _ 10 EML EML ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 13 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 16 RXR- rxr- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 agonist agonist NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 21 either either CCONJ CC _ _ _ _ _ 22 in in SCONJ IN _ _ _ _ _ 23 potentiating potentiat VERB VBG VerbForm=Ger _ _ _ _ 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 commitment commitment NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 EML EML ADJ JJ Degree=Pos _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 granulocyte granulocyte NOUN NN Number=Sing _ _ _ _ 36 lineage lineage NOUN NN Number=Sing _ _ _ _ 37 or or CCONJ CC _ _ _ _ _ 38 in in SCONJ IN _ _ _ _ _ 39 transactivating transactivat VERB VBG VerbForm=Ger _ _ _ _ 40 RAR RAR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 RXR RXR PROPN NNP Number=Sing _ _ _ _ 43 response response NOUN NN Number=Sing _ _ _ _ 44 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 2164 # text = RA- triggered GALdbd-RARalpha hybrid activity in these cells indicates that the multipotent EML cells harbor substantial nuclear hormone receptor coactivator activity. 1 RA Ra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ _ 3 triggered trigger VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 GALdbd GALdbd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 RARalpha RARalpha PROPN NNP Number=Sing _ _ _ _ 7 hybrid hybrid NOUN NN Number=Sing _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 indicates indicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 multipotent multipotent ADJ JJ Degree=Pos _ _ _ _ 16 EML eml ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 harbor harbor CCONJ CC _ _ _ _ _ 19 substantial substantial ADJ JJ Degree=Pos _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 hormone hormone NOUN NN Number=Sing _ _ _ _ 22 receptor receptor NOUN NN Number=Sing _ _ _ _ 23 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2165 # text = However, the histone deacetylase (HDAC) inhibitor trichostatin 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 histone histone NOUN NN Number=Sing _ _ _ _ 5 deacetylase deacetylase NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 HDAC HDAC NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 10 trichostatin trichostatin NOUN NN Number=Sing _ _ _ _ # sent_id = 2166 # text = A readily activates an RXR-RAR reporter construct in the multipotent EML cells but not in the committed MPRO promyelocytes, indicating that differences in HDAC-containing repressor complexes in these two closely related but distinct hematopoietic lineages might account for the differential activation of the RXR-RARalpha403 heterodimers that we observed at these different stages of myeloid development. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 readily readily NOUN NN Number=Sing _ _ _ _ 3 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 RXR RXR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 RAR RAR PROPN NNP Number=Sing _ _ _ _ 8 reporter reporter NOUN NN Number=Sing _ _ _ _ 9 construct construct NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 multipotent multipotent ADJ JJ Degree=Pos _ _ _ _ 13 EML EML ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 committed committed ADJ JJ Degree=Pos _ _ _ _ 20 MPRO Mpro NOUN NN Number=Sing _ _ _ _ 21 promyelocytes promyelocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 differences difference NOUN NNS Number=Plur _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 HDAC HDAC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 containing contain VERB VBG VerbForm=Ger _ _ _ _ 30 repressor repressor NOUN NN Number=Sing _ _ _ _ 31 complexes complex NOUN NNS Number=Plur _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 34 two two NUM CD NumType=Card _ _ _ _ 35 closely closely ADV RB _ _ _ _ _ 36 related related ADJ JJ Degree=Pos _ _ _ _ 37 but but CCONJ CC _ _ _ _ _ 38 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 39 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 40 lineages lineage NOUN NNS Number=Plur _ _ _ _ 41 might might AUX MD VerbForm=Fin _ _ _ _ 42 account account VERB VB VerbForm=Inf _ _ _ _ 43 for for ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 differential differential ADJ JJ Degree=Pos _ _ _ _ 46 activation activation NOUN NN Number=Sing _ _ _ _ 47 of of ADP IN _ _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 RXR- rxr- SYM SYM _ _ _ _ SpaceAfter=No 50 RARalpha403 RARalpha403 NUM CD NumType=Card _ _ _ _ 51 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 52 that that PRON WDT PronType=Rel _ _ _ _ 53 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 54 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 55 at at ADP IN _ _ _ _ _ 56 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 57 different different ADJ JJ Degree=Pos _ _ _ _ 58 stages stage NOUN NNS Number=Plur _ _ _ _ 59 of of ADP IN _ _ _ _ _ 60 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 61 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 62 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2167 # text = Document 003003143 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003143 003003143 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2168 # text = Decreased concentration of 1,25-dihydroxyvitamin D3 receptors in peripheral mononuclear cells of patients with X-linked hypophosphatemic rickets: effect of phosphate supplementation. 1 Decreased Decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 concentration concentration NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 dihydroxyvitamin dihydroxyvitamin NOUN NN Number=Sing _ _ _ _ 7 D3 D3 NOUN NN Number=Sing _ _ _ _ 8 receptors receptor NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 11 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 patients patient NOUN NNS Number=Plur _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 X X PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 hypophosphatemic hypophosphatemic ADJ JJ Degree=Pos _ _ _ _ 20 rickets ricket NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 : : PUNCT : _ _ _ _ _ 22 effect effect NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 phosphate phosphate ADJ JJ Degree=Pos _ _ _ _ 25 supplementation supplementation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2169 # text = Abnormal renal tubular phosphate transport is considered to be the primary defect in X-linked hypophosphatemic rickets (XLH). 1 Abnormal abnormal ADJ JJ Degree=Pos _ _ _ _ 2 renal renal ADJ JJ Degree=Pos _ _ _ _ 3 tubular tubular NOUN NN Number=Sing _ _ _ _ 4 phosphate phosphate NOUN NN Number=Sing _ _ _ _ 5 transport transport NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 considered consider VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 primary primary ADJ JJ Degree=Pos _ _ _ _ 12 defect defect NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 X X PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 hypophosphatemic hypophosphatemic ADJ JJ Degree=Pos _ _ _ _ 18 rickets ricket NOUN NNS Number=Plur _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 XLH XLH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2170 # text = However, the resistance to vitamin D treatment in XLH cannot be explained by hypophosphatemia alone. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 resistance resistance NOUN NN Number=Sing _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 vitamin vitamin VERB VB VerbForm=Inf _ _ _ _ 7 D would NOUN NN Number=Sing _ _ _ _ 8 treatment treatment NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 XLH XLH PROPN NNP Number=Sing _ _ _ _ 11 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 12 not not PART RB _ _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 explained explain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 hypophosphatemia hypophosphatemia NOUN NN Number=Sing _ _ _ _ 17 alone alone ADV RB _ _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2171 # text = Since most of the actions of vitamin D are mediated by its receptors (VDR), abnormalities of VDR have been postulated in XLH. 1 Since since SCONJ IN _ _ _ _ _ 2 most most ADJ JJS Degree=Sup _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 actions action NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 vitamin vitamin NOUN NN Number=Sing _ _ _ _ 8 D d NOUN NN Number=Sing _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 receptors receptor NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 VDR VDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 abnormalities abnormality NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 VDR Vdr PROPN NNP Number=Sing _ _ _ _ 21 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 23 postulated postulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 XLH XLH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2172 # text = In order to investigate this possibility, we measured the concentration of VDR in PHA-activated peripheral mononuclear cells from 10 XLH patients. 1 In in ADP IN _ _ _ _ _ 2 order order NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 possibility possibility NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 9 measured measure VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 concentration concentration NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 VDR VDR PROPN NNP Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 PHA PHA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 19 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 10 10 NUM CD NumType=Card _ _ _ _ 23 XLH Xlh ADJ JJ Degree=Pos _ _ _ _ 24 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2173 # text = Patients without phosphate supplementation showed significantly lower concentration (21.7 +/- 5.1 fmol/mg protein, mean +/- SEM) compared to the normal controls (60.7 +/- 4.0). 1 Patients patient NOUN NNS Number=Plur _ _ _ _ 2 without without ADP IN _ _ _ _ _ 3 phosphate phosphate NOUN NN Number=Sing _ _ _ _ 4 supplementation supplementation NOUN NN Number=Sing _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 significantly significantly ADV RB _ _ _ _ _ 7 lower lower ADJ JJR Degree=Cmp _ _ _ _ 8 concentration concentration NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 21.7 21.7 NUM CD NumType=Card _ _ _ _ 11 +/- +/- SYM SYM _ _ _ _ _ 12 5.1 5.1 NUM CD NumType=Card _ _ _ _ 13 fmol fmol NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 mg mg NOUN NN Number=Sing _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 mean mean X GW _ _ _ _ _ 19 +/- +/- X GW _ _ _ _ _ 20 SEM SEM NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 normal normal ADJ JJ Degree=Pos _ _ _ _ 26 controls controls NOUN NNS Number=Plur _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 60.7 60.7 NUM CD NumType=Card _ _ _ _ 29 +/- +/- SYM SYM _ _ _ _ _ 30 4.0 4.0 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2174 # text = On the contrary, there was no significant difference between the phosphate-supplemented patients (58.3 +/- 2.7) and controls. 1 On on ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 contrary contrary ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 there there PRON EX _ _ _ _ _ 6 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 no no DET DT _ _ _ _ _ 8 significant significant ADJ JJ Degree=Pos _ _ _ _ 9 difference difference NOUN NN Number=Sing _ _ _ _ 10 between between ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 phosphate phosphate NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 supplemented supplement VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 patients patient NOUN NNS Number=Plur _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 58.3 58.3 NUM CD NumType=Card _ _ _ _ 18 +/- +/- SYM SYM _ _ _ _ _ 19 2.7 2.7 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 controls control NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2175 # text = There was a significant positive correlation between VDR concentration and serum phosphate (P less than 0.05). 1 There there PRON EX _ _ _ _ _ 2 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 significant significant ADJ JJ Degree=Pos _ _ _ _ 5 positive positive ADJ JJ Degree=Pos _ _ _ _ 6 correlation correlation NOUN NN Number=Sing _ _ _ _ 7 between between ADP IN _ _ _ _ _ 8 VDR Vdr ADJ JJ Degree=Pos _ _ _ _ 9 concentration concentration NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 serum serum NOUN NN Number=Sing _ _ _ _ 12 phosphate phosphate NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 P p SYM NFP _ _ _ _ _ 15 less less ADJ JJR Degree=Cmp _ _ _ _ 16 than than ADP IN _ _ _ _ _ 17 0.05 0.05 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2176 # text = In two patients, VDR was increased after daily phosphate supplementation was started. 1 In in ADP IN _ _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 patients patient NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 VDR VDR PROPN NNP Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 after after ADP IN _ _ _ _ _ 9 daily daily ADJ JJ Degree=Pos _ _ _ _ 10 phosphate phosphate NOUN NN Number=Sing _ _ _ _ 11 supplementation supplementation NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 started start VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 2177 # text = These results indicate that a decreased concentration of VDR secondary to persistent hypophosphatemia is one of the causes of vitamin D resistance in XLH. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 decreased decreased VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 concentration concentration NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 VDR VDR PROPN NNP Number=Sing _ _ _ _ 10 secondary secondary ADJ JJ Degree=Pos _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 persistent persistent ADJ JJ Degree=Pos _ _ _ _ 13 hypophosphatemia hypophosphatemia NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 one one NUM CD NumType=Card _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 causes cause NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 vitamin vitamin ADJ JJ Degree=Pos _ _ _ _ 21 D d NOUN NN Number=Sing _ _ _ _ 22 resistance resistance NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 XLH XLH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2178 # text = Document 003003144 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003144 003003144 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2179 # text = Spi-C, a novel Ets protein that is temporally regulated during B lymphocyte development. 1 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -C -C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 novel novel NOUN NN Number=Sing _ _ _ _ 6 Ets Ets NOUN NN Number=Sing _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 temporally temporally ADV RB _ _ _ _ _ 11 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 during during ADP IN _ _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 15 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2180 # text = A novel Ets protein was isolated by yeast one-hybrid screening of a cDNA library made from lipopolysaccharide-stimulated mouse splenic 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 novel novel ADJ JJ Degree=Pos _ _ _ _ 3 Ets Ets NOUN NNS Number=Plur _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 isolated isolate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 yeast yeast ADJ JJS Degree=Sup _ _ _ _ 9 one one NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 hybrid hybrid NOUN NN Number=Sing _ _ _ _ 12 screening screening NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 16 library library NOUN NN Number=Sing _ _ _ _ 17 made make VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 mouse mouse NOUN NN Number=Sing _ _ _ _ 23 splenic splenic NOUN NN Number=Sing _ _ _ _ # sent_id = 2181 # text = B cells, using the SP6 kappa promoter kappaY element as a bait. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 using use VERB VBG VerbForm=Ger _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 SP6 Sp6 PROPN NNP Number=Sing _ _ _ _ 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 kappaY kappay NOUN NN Number=Sing _ _ _ _ 10 element element NOUN NN Number=Sing _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 bait bait NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 2182 # text = The novel Ets protein was most closely related to PU.1 and Spi-B within the DNA binding Ets domain and was therefore named Spi-C. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 novel novel NOUN NN Number=Sing _ _ _ _ 3 Ets Ets PROPN NNPS Number=Plur _ _ _ _ 4 protein protein PROPN NNP Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 most most ADV RBS _ _ _ _ _ 7 closely closely ADV RB _ _ _ _ _ 8 related related ADJ JJ Degree=Pos _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 PU.1 PU.1 PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 B B PROPN NNP Number=Sing _ _ _ _ 15 within within ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 DNA dna NOUN NN Number=Sing _ _ _ _ 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 Ets et NOUN NNS Number=Plur _ _ _ _ 20 domain domain NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 therefore therefore ADV RB _ _ _ _ _ 24 named name VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2183 # text = However, Spi-C may represent a novel subgroup within the Ets protein family, as it differed significantly from Spi-B and PU.1 within helix 1 of the Ets domain. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 -C -C PROPN NNP Number=Sing _ _ _ _ 5 may may AUX MD VerbForm=Fin _ _ _ _ 6 represent represent VERB VB VerbForm=Inf _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 novel novel NOUN NN Number=Sing _ _ _ _ 9 subgroup subgroup NOUN NN Number=Sing _ _ _ _ 10 within within ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 Ets ets PROPN NNPS Number=Plur _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 as as SCONJ IN _ _ _ _ _ 17 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 18 differed differ VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 significantly significantly ADV RB _ _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 B B PROPN NNP Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 PU.1 PU.1 NUM CD NumType=Card _ _ _ _ 26 within within ADP IN _ _ _ _ _ 27 helix helix NUM CD NumType=Card _ _ _ _ 28 1 1 NUM CD NumType=Card _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 Ets ets PROPN NNPS Number=Plur _ _ _ _ 32 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 2184 # text = Spi-C was encoded by a single-copy gene that was mapped to chromosome 10, region C. Spi-C interacted with DNA similarly to PU.1 as judged by methylation interference, band-shift and site selection analysis, and activated transcription of a kappaY element reporter gene upon co-transfection of HeLa cells. 1 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -C -C PROPN NNP Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 encoded encod VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 single single ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 copy copy NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 mapped map VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 chromosome chromosome VERB VB VerbForm=Inf _ _ _ _ 16 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 region region NOUN NN Number=Sing _ _ _ _ 19 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ 21 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 C C PROPN NNP Number=Sing _ _ _ _ 24 interacted interact VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 DNA dna NOUN NN Number=Sing _ _ _ _ 27 similarly similarly ADV RB _ _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 PU.1 PU.1 PROPN NNP Number=Sing _ _ _ _ 30 as as SCONJ IN _ _ _ _ _ 31 judged judge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 methylation methylation NOUN NN Number=Sing _ _ _ _ 34 interference interference NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 band band NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 shift shift NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 site site NOUN NN Number=Sing _ _ _ _ 41 selection selection NOUN NN Number=Sing _ _ _ _ 42 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 transcription transcription NOUN NN Number=Sing _ _ _ _ 47 of of ADP IN _ _ _ _ _ 48 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 49 kappaY kappaY PROPN NNP Number=Sing _ _ _ _ 50 element element NOUN NN Number=Sing _ _ _ _ 51 reporter reporter NOUN NN Number=Sing _ _ _ _ 52 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 53 upon upon ADP IN _ _ _ _ _ 54 co-transfection co-transfection NOUN NN Number=Sing _ _ _ _ 55 of of ADP IN _ _ _ _ _ 56 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 57 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 2185 # text = Spi-C RNA was expressed in mature B lymphocytes and at lower levels in macrophages. 1 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -C -C PROPN NNP Number=Sing _ _ _ _ 3 RNA RNA PROPN NNP Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 mature mature ADJ JJ Degree=Pos _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 at at ADP IN _ _ _ _ _ 12 lower lower ADJ JJR Degree=Cmp _ _ _ _ 13 levels level NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2186 # text = Furthermore, pre-B cell and plasma cell lines were Spi-C-negative, suggesting that Spi-C might be a regulatory molecule during a specific phase of B lymphoid development. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 pre pre X AFX _ _ _ _ SpaceAfter=No 4 -B -b ADJ JJ Degree=Pos _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 plasma plasma NOUN NN Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 lines line NOUN NNS Number=Plur _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 -C- -C- SYM NFP _ _ _ _ SpaceAfter=No 13 negative negative ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 C C PROPN NNP Number=Sing _ _ _ _ 20 might might AUX MD VerbForm=Fin _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 24 molecule molecule NOUN NN Number=Sing _ _ _ _ 25 during during ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 specific specific ADJ JJ Degree=Pos _ _ _ _ 28 phase phase NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 B b ADJ JJ Degree=Pos _ _ _ _ 31 lymphoid lymphoid NOUN NN Number=Sing _ _ _ _ 32 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2187 # text = Document 003003147 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003147 003003147 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2188 # text = Expression of the nucleoside diphosphate kinase in human skin cancers: an immunohistochemical study. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 nucleoside nucleoside ADJ JJ Degree=Pos _ _ _ _ 5 diphosphate diphosphate NOUN NN Number=Sing _ _ _ _ 6 kinase kinase NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 skin skin NOUN NN Number=Sing _ _ _ _ 10 cancers cancer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 : : PUNCT : _ _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 immunohistochemical immunohistochemical ADJ JJ Degree=Pos _ _ _ _ 14 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2189 # text = Expression of nucleoside diphosphate(NDP) kinase, which is homologous to the nm23 gene product in a variety of species, has been found to be inversely associated with metastatic potential. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 nucleoside nucleoside ADJ JJ Degree=Pos _ _ _ _ 4 diphosphate diphosphate NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 NDP NDP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 which which PRON WDT PronType=Rel _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 nm23 nm23 NOUN NN Number=Sing _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 product product NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 variety variety NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 species species NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 26 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 be be AUX VB VerbForm=Inf _ _ _ _ 29 inversely inversely ADV RB _ _ _ _ _ 30 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 metastatic metastatic ADJ JJ Degree=Pos _ _ _ _ 33 potential potential NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2190 # text = However, the relationship remains controversial according to the tumor cell types and experimental system, with conflicting results from different research groups. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 relationship relationship NOUN NN Number=Sing _ _ _ _ 5 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 controversial controversial ADJ JJ Degree=Pos _ _ _ _ 7 according accord VERB VBG VerbForm=Ger _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 tumor tumor NOUN NN Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 types type NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 experimental experimental ADJ JJ Degree=Pos _ _ _ _ 15 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 with with SCONJ IN _ _ _ _ _ 18 conflicting conflicte VERB VBG VerbForm=Ger _ _ _ _ 19 results result NOUN NNS Number=Plur _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 different different ADJ JJ Degree=Pos _ _ _ _ 22 research research NOUN NN Number=Sing _ _ _ _ 23 groups group NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2191 # text = In order to determine whether NDP kinase expression serves as a marker for metastatic potential in human skin cancer, we assessed the levels of NDP kinase expression in 9 keratoacanthomas (KAs), 26 squamous cell carcinomas (SCCs), and 25 basal cell carcinomas (BCCs) using immunohistochemistry. 1 In in ADP IN _ _ _ _ _ 2 order order NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 determine determine VERB VB VerbForm=Inf _ _ _ _ 5 whether whether SCONJ IN _ _ _ _ _ 6 NDP Ndp PROPN NNP Number=Sing _ _ _ _ 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 serves serve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 marker marker NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 metastatic metastatic ADJ JJ Degree=Pos _ _ _ _ 15 potential potential NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 skin skin NOUN NN Number=Sing _ _ _ _ 19 cancer cancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 22 assessed assess VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 levels level NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 NDP Ndp NOUN NN Number=Sing _ _ _ _ 27 kinase kinase NOUN NN Number=Sing _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 9 9 NUM CD NumType=Card _ _ _ _ 31 keratoacanthomas keratoacanthoma NOUN NNS Number=Plur _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 KAs KAs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 26 26 NUM CD NumType=Card _ _ _ _ 37 squamous squamous ADJ JJ Degree=Pos _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 carcinomas carcinoma NOUN NNS Number=Plur _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 SCCs SCC PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 25 25 NUM CD NumType=Card _ _ _ _ 46 basal basal ADJ JJ Degree=Pos _ _ _ _ 47 cell cell NOUN NN Number=Sing _ _ _ _ 48 carcinomas carcinoma NOUN NNS Number=Plur _ _ _ _ 49 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 50 BCCs Bccs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ _ 52 using use VERB VBG VerbForm=Ger _ _ _ _ 53 immunohistochemistry immunohistochemistry NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 2192 # text = The expression of NDP kinase was intense in KA and SCC compared with BCC. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NDP NDP PROPN NNP Number=Sing _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 intense intense ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 KA KA PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 SCC SCC PROPN NNP Number=Sing _ _ _ _ 12 compared compare VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 BCC BCC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 2193 # text = However, the difference of NDP kinase expression between KA and SCC was not statistically significant. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 difference difference NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NDP NDP PROPN NNP Number=Sing _ _ _ _ 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 between between ADP IN _ _ _ _ _ 10 KA KA PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 SCC SCC PROPN NNP Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 statistically statistically ADV RB _ _ _ _ _ 16 significant significant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2194 # text = And there was no statistically significant difference in NDP kinase expression between SCC with metastasis and SCC without metastasis. 1 And and CCONJ CC _ _ _ _ _ 2 there there PRON EX _ _ _ _ _ 3 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 no no DET DT _ _ _ _ _ 5 statistically statistically ADV RB _ _ _ _ _ 6 significant significant ADJ JJ Degree=Pos _ _ _ _ 7 difference difference NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 NDP Ndp PROPN NNP Number=Sing _ _ _ _ 10 kinase kinase NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 between between ADP IN _ _ _ _ _ 13 SCC Scc NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 metastasis metastasis NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 SCC Scc NOUN NN Number=Sing _ _ _ _ 18 without without ADP IN _ _ _ _ _ 19 metastasis metastasis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2195 # text = Our results contradict the hypothesis concerning the possible role of nm23 gene as a metastatic suppressor gene in human skin cancer. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 contradict contradict VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 6 concerning concern VERB VBG VerbForm=Ger _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 possible possible ADJ JJ Degree=Pos _ _ _ _ 9 role role NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 nm23 nm23 NUM CD NumType=Card _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 metastatic metastatic ADJ JJ Degree=Pos _ _ _ _ 16 suppressor suppressor NOUN NN Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 skin skin NOUN NN Number=Sing _ _ _ _ 21 cancer cancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2196 # text = The mechanism of overexpression in various tumor cell types and its biological significance in cutaneous carcinogenesis remain to be determined. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 various various ADJ JJ Degree=Pos _ _ _ _ 7 tumor tumor NOUN NN Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 types type NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 12 biological biological ADJ JJ Degree=Pos _ _ _ _ 13 significance significance NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 cutaneous cutaneous ADJ JJ Degree=Pos _ _ _ _ 16 carcinogenesis carcinogenesis NOUN NN Number=Sing _ _ _ _ 17 remain remain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2197 # text = Document 003003150 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003150 003003150 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2198 # text = Glucocorticoid receptors are down-regulated in inflamed colonic mucosa but not in peripheral blood mononuclear cells from patients with inflammatory bowel disease [see comments] BACKGROUND: Growing evidence indicates that the immune system and the hypothalamic-pituitary-adrenal system are linked by several mechanisms, for example intracellular glucocorticoid receptors (hGR). 1 Glucocorticoid Glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 2 receptors receptor NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 down down ADV RB _ _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 inflamed inflam VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 colonic colonic ADJ JJ Degree=Pos _ _ _ _ 10 mucosa mucosa NOUN NN Number=Sing _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 15 blood blood NOUN NN Number=Sing _ _ _ _ 16 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 patients patient NOUN NNS Number=Plur _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 22 bowel bowel NOUN NN Number=Sing _ _ _ _ 23 disease disease NOUN NN Number=Sing _ _ _ _ 24 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 see see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 comments comment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n 28 BACKGROUND background NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 : : PUNCT : _ _ _ _ _ 30 Growing growing VERB VBG VerbForm=Ger _ _ _ _ 31 evidence evidence NOUN NN Number=Sing _ _ _ _ 32 indicates indicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 that that SCONJ IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 immune immune ADJ JJ Degree=Pos _ _ _ _ 36 system system NOUN NN Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 hypothalamic hypothalamic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 pituitary pituitary NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 adrenal adrenal ADJ JJ Degree=Pos _ _ _ _ 44 system system NOUN NN Number=Sing _ _ _ _ 45 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 46 linked link VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 47 by by ADP IN _ _ _ _ _ 48 several several ADJ JJ Degree=Pos _ _ _ _ 49 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 , , PUNCT , _ _ _ _ _ 51 for for ADP IN _ _ _ _ _ 52 example example NOUN NN Number=Sing _ _ _ _ 53 intracellular intracelular ADJ JJ Degree=Pos _ _ _ _ 54 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ _ 55 receptors receptor NOUN NNS Number=Plur _ _ _ _ 56 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 57 hGR hGR NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 2199 # text = Glucocorticoids are the standard treatment of acute attacks of inflammatory bowel disease (IBD). 1 Glucocorticoids Glucocorticoid NOUN NNS Number=Plur _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 standard standard ADJ JJ Degree=Pos _ _ _ _ 5 treatment treatment NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 acute acute ADJ JJ Degree=Pos _ _ _ _ 8 attacks attack NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 11 bowel bowel NOUN NN Number=Sing _ _ _ _ 12 disease disease NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 IBD IBD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2200 # text = Binding of glucocorticoids to hGR down-regulates the transcription of inflammatory genes that can propagate IBD. 1 Binding binding NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 hGR hGR VERB VB VerbForm=Inf _ _ _ _ 6 down down ADV RB _ _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 can can AUX MD VerbForm=Fin _ _ _ _ 16 propagate propagate VERB VB VerbForm=Inf _ _ _ _ 17 IBD IBD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2201 # text = PATIENTS AND METHODS: IBD patients were either treated with 5-60 mg of prednisolone for more than 1 week or were without glucocorticoid treatment for more than 4 weeks. 1 PATIENTS patient NOUN NNS Number=Plur _ _ _ _ 2 AND and CCONJ CC _ _ _ _ _ 3 METHODS method NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ 5 IBD Ibd ADJ JJ Degree=Pos _ _ _ _ 6 patients patient NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 either either ADV RB _ _ _ _ _ 9 treated treat VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 60 60 NUM CD NumType=Card _ _ _ _ 14 mg mg NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 prednisolone prednisolone PRON NN Number=Sing _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 more more ADJ JJR Degree=Cmp _ _ _ _ 19 than than ADP IN _ _ _ _ _ 20 1 1 NUM CD NumType=Card _ _ _ _ 21 week week NOUN NN Number=Sing _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 without without ADP IN _ _ _ _ _ 25 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 26 treatment treatment NOUN NN Number=Sing _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 more more ADJ JJR Degree=Cmp _ _ _ _ 29 than than ADP IN _ _ _ _ _ 30 4 4 NUM CD NumType=Card _ _ _ _ 31 weeks week NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2202 # text = hGR levels were determined from isolated cytosol of peripheral blood mononuclear cells (PBMCs) or mucosal biopsies using a radioassay with [3H]-dexamethasone. 1 hGR hgr ADJ JJR Degree=Cmp _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 10 blood blood NOUN NN Number=Sing _ _ _ _ 11 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 PBMCs PBMC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 mucosal mucosal ADJ JJ Degree=Pos _ _ _ _ 18 biopsies biopsy NOUN NNS Number=Plur _ _ _ _ 19 using use VERB VBG VerbForm=Ger _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 radioassay radioassay NOUN NN Number=Sing _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 H h NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2203 # text = Interleukin (IL) 6 levels were determined by enzyme-linked immunosorbent assay (ELISA). 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 6 6 NUM CD NumType=Card _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 enzyme enzyme NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 -linked -link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 immunosorbent immunosorbent ADJ JJ Degree=Pos _ _ _ _ 13 assay assay NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 ELISA ELISA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2204 # text = RESULTS: The systemic (PBMC) hGR levels of corticosteroid-treated IBD patients were significantly lower than those of control subjects (59.6 +/- 57.1 dpm mg-1 cytosol protein vs. 227.0 +/- 90.8 dpm mg-1 cytosol protein, P = 0.007) and IBD patients not receiving glucocorticoid treatment (179.7 +/- 171.3 dpm mg-1 cytosol protein, P = 0.002). 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 The the DET DT Definite=Def|PronType=Art _ _ _ _ 4 systemic systemic NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 PBMC PBMC NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 hGR hgr NOUN NN Number=Sing _ _ _ _ 9 levels level NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 corticosteroid corticosteroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 IBD ibd PROPN NNP Number=Sing _ _ _ _ 15 patients patient NOUN NNS Number=Plur _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 significantly significantly ADV RB _ _ _ _ _ 18 lower lower ADJ JJR Degree=Cmp _ _ _ _ 19 than than ADP IN _ _ _ _ _ 20 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 control control NOUN NN Number=Sing _ _ _ _ 23 subjects subject NOUN NNS Number=Plur _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 59.6 59.6 NUM CD NumType=Card _ _ _ _ 26 +/- +/- SYM SYM _ _ _ _ _ 27 57.1 57.1 NUM CD NumType=Card _ _ _ _ 28 dpm dpm NOUN NN Number=Sing _ _ _ _ 29 mg mg NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 33 protein protein NOUN NN Number=Sing _ _ _ _ 34 vs. versus ADP IN _ _ _ _ _ 35 227.0 227.0 NUM CD NumType=Card _ _ _ _ 36 +/- +/- SYM SYM _ _ _ _ _ 37 90.8 90.8 NUM CD NumType=Card _ _ _ _ 38 dpm dpm NOUN NN Number=Sing _ _ _ _ 39 mg mg NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 1 1 NUM CD NumType=Card _ _ _ _ 42 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 43 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 P p NOUN NN Number=Sing _ _ _ _ 46 = = SYM SYM _ _ _ _ _ 47 0.007 0.007 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 IBD IBD PROPN NNP Number=Sing _ _ _ _ 51 patient patient NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 53 not not PART RB _ _ _ _ _ 54 receiving receive VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 55 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 56 treatment treatment NOUN NN Number=Sing _ _ _ _ 57 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 58 179.7 179.7 NUM CD NumType=Card _ _ _ _ 59 +/- +/- SYM SYM _ _ _ _ _ 60 171.3 171.3 NUM CD NumType=Card _ _ _ _ 61 dpm dpm NOUN NN Number=Sing _ _ _ _ 62 mg mg VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 63 -1 -1 NUM CD NumType=Card _ _ _ _ 64 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 65 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 66 , , PUNCT , _ _ _ _ _ 67 P p NOUN NN Number=Sing _ _ _ _ 68 = = SYM SYM _ _ _ _ _ 69 0.002 0.002 NUM CD NumType=Card _ _ _ SpaceAfter=No 70 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 71 . . PUNCT . _ _ _ _ _ # sent_id = 2205 # text = Systemic hGR levels in untreated IBD patients did not differ significantly from those in control subjects. 1 Systemic Systemic ADJ JJ Degree=Pos _ _ _ _ 2 hGR hgr NOUN NN Number=Sing _ _ _ _ 3 levels level NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 untreated untreated ADJ JJ Degree=Pos _ _ _ _ 6 IBD Ibd PROPN NNP Number=Sing _ _ _ _ 7 patients patient NOUN NNS Number=Plur _ _ _ _ 8 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 differ differ VERB VB VerbForm=Inf _ _ _ _ 11 significantly significantly ADV RB _ _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 control control NOUN NN Number=Sing _ _ _ _ 16 subjects subject NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2206 # text = In patients with connective tissue diseases, systemic hGR levels were also found to be decreased in the absence of glucocorticoid treatment. 1 In in ADP IN _ _ _ _ _ 2 patients patient NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 connective connective ADJ JJ Degree=Pos _ _ _ _ 5 tissue tissue NOUN NN Number=Sing _ _ _ _ 6 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 systemic systemic ADJ JJ Degree=Pos _ _ _ _ 9 hGR hgr NOUN NN Number=Sing _ _ _ _ 10 levels level NOUN NNS Number=Plur _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 also also ADV RB _ _ _ _ _ 13 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 absence absence NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 22 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2207 # text = Systemic hGR levels in patients with Crohn's disease (CD) treated with steroids (66.6 +/- 61.0 dpm mg-1 cytosol protein) were not different from those in patients with ulcerative colitis (UC) (56.1 +/- 51.6 dpm mg-1 cytosol protein). 1 Systemic Systemic ADJ JJ Degree=Pos _ _ _ _ 2 hGR hgr NOUN NN Number=Sing _ _ _ _ 3 levels level NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 patients patient NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 Crohn Crohn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 's 's PART POS _ _ _ _ _ 9 disease disease NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 treated treat VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 steroids steroid NOUN NNS Number=Plur _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 66.6 66.6 NUM CD NumType=Card _ _ _ _ 18 +/- +/- SYM SYM _ _ _ _ _ 19 61.0 61.0 NUM CD NumType=Card _ _ _ _ 20 dpm dpm NOUN NN Number=Sing _ _ _ _ 21 mg mg NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 not not PART RB _ _ _ _ _ 29 different different ADJ JJ Degree=Pos _ _ _ _ 30 from from ADP IN _ _ _ _ _ 31 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 patients patient NOUN NNS Number=Plur _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 ulcerative ulcerative ADJ JJ Degree=Pos _ _ _ _ 36 colitis colitis NOUN NN Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 UC Uc NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 56.1 56.1 NUM CD NumType=Card _ _ _ _ 42 +/- +/- SYM SYM _ _ _ _ _ 43 51.6 51.6 NUM CD NumType=Card _ _ _ _ 44 dpm dpm NOUN NN Number=Sing _ _ _ _ 45 mg mg VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 46 -1 -1 NUM CD NumType=Card _ _ _ _ 47 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 48 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 2208 # text = In contrast to these findings, mucosal hGR levels were significantly decreased in both steroid-treated (18.0 +/- 15.5) and not steroid-treated (37.8 +/- 30.5) patients compared with control subjects ( 125.6 +/- 97.1; P = 0.00009 and P = 0.0008 respectively ). 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 findings finding NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 mucosal mucosal ADJ JJ Degree=Pos _ _ _ _ 8 hGR hgr NOUN NN Number=Sing _ _ _ _ 9 levels level NOUN NNS Number=Plur _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 significantly significantly ADV RB _ _ _ _ _ 12 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 both both DET DT _ _ _ _ _ 15 steroid steroid NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 treated treat VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 18.0 18.0 NUM CD NumType=Card _ _ _ _ 20 +/- +/- SYM SYM _ _ _ _ _ 21 15.5 15.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 not not ADV RB _ _ _ _ _ 25 steroid steroid VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 treated treat VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 37.8 37.8 NUM CD NumType=Card _ _ _ _ 30 +/- +/- SYM SYM _ _ _ _ _ 31 30.5 30.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 patients patient NOUN NN Number=Sing _ _ _ _ 34 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 control control NOUN NN Number=Sing _ _ _ _ 37 subjects subjects NOUN NNS Number=Plur _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ _ 39 125.6 125.6 NUM CD NumType=Card _ _ _ _ 40 +/- +/- SYM SYM _ _ _ _ _ 41 97.1 97.1 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 ; ; PUNCT , _ _ _ _ _ 43 P p NOUN NN Number=Sing _ _ _ _ 44 = = SYM SYM _ _ _ _ _ 45 0.00009 0.00009 NUM CD NumType=Card _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 P p NOUN NN Number=Sing _ _ _ _ 48 = = SYM SYM _ _ _ _ _ 49 0.0008 0.0008 NUM CD NumType=Card _ _ _ _ 50 respectively respectively ADV RB _ _ _ _ _ 51 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 2209 # text = IL-6 levels in all IBD groups with and without steroids were significantly different from those in control subjects. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 6 6 NUM CD NumType=Card _ _ _ _ 4 levels level NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 all all DET DT _ _ _ _ _ 7 IBD Ibd ADJ JJ Degree=Pos _ _ _ _ 8 groups group NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 without without ADP IN _ _ _ _ _ 12 steroids steroid NOUN NNS Number=Plur _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 significantly significantly ADV RB _ _ _ _ _ 15 different different ADJ JJ Degree=Pos _ _ _ _ 16 from from ADP IN _ _ _ _ _ 17 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 control control NOUN NN Number=Sing _ _ _ _ 20 subjects subjects NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2210 # text = CONCLUSION: In IBD there is no difference in systemic hGR levels between not steroid-treated patients and control subjects, in spite of inflammatory activity (IL-6). 1 CONCLUSION conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 In in ADP IN _ _ _ _ _ 4 IBD IBD PROPN NNP Number=Sing _ _ _ _ 5 there there ADV RB PronType=Dem _ _ _ _ 6 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 no no DET DT _ _ _ _ _ 8 difference difference NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 systemic systemic ADJ JJ Degree=Pos _ _ _ _ 11 hGR hgr NOUN NN Number=Sing _ _ _ _ 12 levels level NOUN NNS Number=Plur _ _ _ _ 13 between between ADV RB _ _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 steroid steroid VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 patients patient NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 control control NOUN NN Number=Sing _ _ _ _ 21 subjects subject NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 spite spite NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - SYM SYM _ _ _ _ SpaceAfter=No 31 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 2211 # text = Mucosal hGR levels were decreased independently of treatment, probably leading to a decreased protection against NF-kappaB action in the intestinal mucosa. 1 Mucosal Mucosal ADJ JJ Degree=Pos _ _ _ _ 2 hGR hgr NOUN NN Number=Sing _ _ _ _ 3 levels level NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 independently independently ADV RB _ _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 probably probably ADV RB _ _ _ _ _ 11 leading lead VERB VBG VerbForm=Ger _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 protection protection NOUN NN Number=Sing _ _ _ _ 16 against against ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 20 action action NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 intestinal intestinal ADJ JJ Degree=Pos _ _ _ _ 24 mucosa mucosa NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2212 # text = Document 003003152 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003152 003003152 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2213 # text = Expression of tal-1 and GATA-binding proteins during human hematopoiesis. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 tal tal NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ _ 11 during during ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 hematopoiesis hematopoiesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2214 # text = Tal-1 rearrangements are associated with nearly 30% of human T acute lymphoblastic leukemia. 1 Tal Tal PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 rearrangements rearrangement NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 nearly nearly ADV RB _ _ _ _ _ 9 30 30 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 % % SYM NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 T T PROPN NNP Number=Sing _ _ _ _ 14 acute acute VERB VB VerbForm=Inf _ _ _ _ 15 lymphoblastic lymphoblastic ADJ JJ Degree=Pos _ _ _ _ 16 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2215 # text = Tal-1 gene encodes a putative transcription factor with a basic helix-loop-helix domain and is known to be predominantly expressed in hematopoietic cells. 1 Tal Tal PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 putative putative ADJ JJ Degree=Pos _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 basic basic ADJ JJ Degree=Pos _ _ _ _ 13 helix-loop helix-loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 -helix -helix NOUN NN Number=Sing _ _ _ _ 15 domain domain NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 be be AUX VB VerbForm=Inf _ _ _ _ 21 predominantly predominantly ADV RB _ _ _ _ _ 22 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2216 # text = We investigated the pattern of tal-1 expression in purified human hematopoietic cells by in situ hybridization and reverse transcriptase polymerase chain reaction analysis. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 pattern pattern NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 tal tal NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 purified purified ADJ JJ Degree=Pos _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 situ situ NOUN NN Number=Sing _ _ _ _ 18 hybridization hybridization NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 reverse reverse NOUN NN Number=Sing _ _ _ _ 21 transcriptase transcriptase NOUN NN Number=Sing _ _ _ _ 22 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 23 chain chain NOUN NN Number=Sing _ _ _ _ 24 reaction reaction NOUN NN Number=Sing _ _ _ _ 25 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2217 # text = Both methods demonstrated that the tal-1 gene is expressed in megakaryocytes and erythroblasts as well as in basophilic granulocytes. 1 Both both DET DT _ _ _ _ _ 2 methods method NOUN NNS Number=Plur _ _ _ _ 3 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 tal tal NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 megakaryocytes megakaryocyte NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 erythroblasts erythroblast NOUN NNS Number=Plur _ _ _ _ 16 as as ADV RB _ _ _ _ _ 17 well well ADV RB Degree=Pos _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 basophilic basophilic ADJ JJ Degree=Pos _ _ _ _ 21 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2218 # text = In addition, our results indicate that the tal-1 1A promoter, which contains two consensus GATA-binding sites, is active mainly in these lineages. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 tal tal NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 two two NUM CD NumType=Card _ _ _ _ 19 consensus consensus NOUN NN Number=Sing _ _ _ _ 20 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 binding binding VERB VBG VerbForm=Ger _ _ _ _ 23 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 active active ADJ JJ Degree=Pos _ _ _ _ 27 mainly mainly ADV RB _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 30 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2219 # text = Because the GATA-1 gene is known to transactivate several genes specific for the erythroid, megakaryocytic, and mastocytic/basophilic lineages, we studied GATA-1 expression in these purified hematopoietic cells. 1 Because because SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 transactivate transactivate VERB VB VerbForm=Inf _ _ _ _ 11 several several ADJ JJ Degree=Pos _ _ _ _ 12 genes gene NOUN NNS Number=Plur _ _ _ _ 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 mastocytic mastocytic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 / / PUNCT , _ _ _ _ SpaceAfter=No 23 basophilic basophilic ADJ JJ Degree=Pos _ _ _ _ 24 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 27 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 expression expression NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 34 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 2220 # text = We found that GATA-1 and tal-1 genes are coexpressed in these three lineages. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 tal tal NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 genes gene NOUN NNS Number=Plur _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 coexpressed coexpress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 16 three three NUM CD NumType=Card _ _ _ _ 17 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2221 # text = Remarkably, the expression of both genes is downmodulated during erythroid and megakaryocytic terminal maturation. 1 Remarkably remarkably ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 both both DET DT _ _ _ _ _ 7 genes gene NOUN NNS Number=Plur _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 downmodulated downmodulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 during during ADP IN _ _ _ _ _ 11 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 14 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 15 maturation maturation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2222 # text = In immature hematopoietic cells, tal-1 and GATA-1 genes are coexpressed in committed progenitors cells (CD34+/CD38(2+)), whereas they are not detectable in the most primitive cells (CD34(2+)/CD38-). 1 In in ADP IN _ _ _ _ _ 2 immature immature ADJ JJ Degree=Pos _ _ _ _ 3 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 tal tal NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 coexpressed coexpress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 committed commit ADJ JJ Degree=Pos _ _ _ _ 18 progenitors progenitor NOUN NNS Number=Plur _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 CD34+/CD38 Cd34+/cd38 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 2+ 2+ SYM SYM _ _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 whereas whereas SCONJ IN _ _ _ _ _ 28 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 29 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 not not PART RB _ _ _ _ _ 31 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 most most ADV RBS _ _ _ _ _ 35 primitive primitive ADJ JJ Degree=Pos _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 CD34 CD34 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 2+) 2+) SYM NFP _ _ _ _ SpaceAfter=No 41 /CD38-) /cd38-) SYM NFP _ _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 2223 # text = In contrast, GATA-2 is strongly expressed in both most primitive and committed progenitors cells, whereas GATA-3 is mostly detected in most primitive ones. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 strongly strongly ADV RB _ _ _ _ _ 9 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 both both DET DT _ _ _ _ _ 12 most most ADV RBS _ _ _ _ _ 13 primitive primitive ADJ JJ Degree=Pos _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 committed commit ADJ JJ Degree=Pos _ _ _ _ 16 progenitors progenitor NOUN NNS Number=Plur _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 whereas whereas SCONJ IN _ _ _ _ _ 20 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - SYM SYM _ _ _ _ SpaceAfter=No 22 3 3 NUM CD NumType=Card _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 mostly mostly ADV RB _ _ _ _ _ 25 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 most most ADJ JJS Degree=Sup _ _ _ _ 28 primitive primitive ADJ JJ Degree=Pos _ _ _ _ 29 ones one NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2224 # text = Altogether our results strongly suggest that GATA-1 modulates the transcription of tal-1 during the differentiation of the erythroid, megakaryocytic, and basosophilic lineages. 1 Altogether altogether ADV RB _ _ _ _ _ 2 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 3 results result NOUN NNS Number=Plur _ _ _ _ 4 strongly strongly ADV RB _ _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 GATA GATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 modulates modulate NOUN NNS Number=Plur _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 tal tal NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 during during ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 basosophilic basosophilic ADJ JJ Degree=Pos _ _ _ _ 28 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2225 # text = Document 003003154 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003154 003003154 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2226 # text = Activation of human CD4 T lymphocytes. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ _ # sent_id = 2227 # text = Interaction of fibronectin with VLA-5 receptor on CD4 cells induces the AP-1 transcription factor. 1 Interaction interaction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 fibronectin fibronectin NOUN NN Number=Sing _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 VLA VLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 5 5 NUM CD NumType=Card _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2228 # text = Fibronectin synergized with anti-CD3 antibody to promote CD4 cell proliferation in a serum-free culture system whereas no proliferation was observed when CD4 cells were cultured with anti-CD3 alone or fibronectin alone. 1 Fibronectin Fibronectin PROPN NNP Number=Sing _ _ _ _ 2 synergized synergize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 5 antibody antibody ADJ JJ Degree=Pos _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 promote promote VERB VB VerbForm=Inf _ _ _ _ 8 CD4 CD4 NUM CD NumType=Card _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 serum serum NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 free free ADJ JJ Degree=Pos _ _ _ _ 16 culture culture NOUN NN Number=Sing _ _ _ _ 17 system system NOUN NN Number=Sing _ _ _ _ 18 whereas whereas SCONJ IN _ _ _ _ _ 19 no no DET DT _ _ _ _ _ 20 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 when when ADV WRB PronType=Int _ _ _ _ 24 CD4 CD4 NUM CD NumType=Card _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 cultured culture VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 30 alone alone ADJ JJ Degree=Pos _ _ _ _ 31 or or CCONJ CC _ _ _ _ _ 32 fibronectin fibronectin ADV RB _ _ _ _ _ 33 alone alone ADV RB _ _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2229 # text = In addition, anti-CD29 (integrin beta 1) as well as anti-VLA-5 (human fibronectin receptor) antibodies blocked this CD4 cell activation in this system. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 anti-CD29 anti-CD29 NUM CD NumType=Card _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 integrin integrin NOUN NN Number=Sing _ _ _ _ 7 beta beta NOUN NN Number=Sing _ _ _ _ 8 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 as as ADV RB _ _ _ _ _ 11 well well ADV RB Degree=Pos _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 anti-VLA anti-vla ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 - - SYM SYM _ _ _ _ SpaceAfter=No 15 5 5 NUM CD NumType=Card _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 fibronectin fibronectin NOUN NN Number=Sing _ _ _ _ 19 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 22 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 24 CD4 Cd4 NOUN NN Number=Sing _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 29 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2230 # text = Although anti-CD3 alone or fibronectin alone cannot induce IL-2 message by CD4 cells, the combination of anti-CD3 plus fibronectin induced IL-2 message by CD4 cells. 1 Although although SCONJ IN _ _ _ _ _ 2 anti anti PRON PRP _ _ _ _ SpaceAfter=No 3 -CD3 -CD3 VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 alone alone ADJ JJ Degree=Pos _ _ _ _ 5 or or CCONJ CC _ _ _ _ _ 6 fibronectin fibronectin ADV RB _ _ _ _ _ 7 alone alone ADV RB _ _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 9 not not PART RB _ _ _ _ _ 10 induce induce VERB VB VerbForm=Inf _ _ _ _ 11 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 message message NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 combination combination NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 23 plus plus CCONJ CC _ _ _ _ _ 24 fibronectin fibronectin NOUN NN Number=Sing _ _ _ _ 25 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ _ 29 message message NOUN NN Number=Sing _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 2231 # text = In an analysis of the molecular mechanism by which IL-2 message was generated, we showed that a fibronectin-VLA-5 fibronectin receptor interaction may contribute an independent signal distinct from the CD3 pathway of activation by the induction of an AP-1 transcriptional factor. 1 In in ADP IN _ _ _ _ _ 2 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 7 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 which which PRON WDT PronType=Rel _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 message message NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 generated generate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 18 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 fibronectin fibronectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 VLA VLa NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 5 5 NUM CD NumType=Card _ _ _ _ 26 fibronectin fibronectin NOUN NN Number=Sing _ _ _ _ 27 receptor receptor NOUN NN Number=Sing _ _ _ _ 28 interaction interaction NOUN NN Number=Sing _ _ _ _ 29 may may AUX MD VerbForm=Fin _ _ _ _ 30 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 31 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 independent independent ADJ JJ Degree=Pos _ _ _ _ 33 signal signal NOUN NN Number=Sing _ _ _ _ 34 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 35 from from ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 38 pathway pathway NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 activation activation NOUN NN Number=Sing _ _ _ _ 41 by by ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 induction induction NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 46 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT , _ _ _ _ SpaceAfter=No 48 1 1 NUM CD NumType=Card _ _ _ _ 49 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 50 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 2232 # text = Thus the VLA-5 fibronectin receptor on CD4 cells can play a complementary role in CD3-TCR-mediated signal transduction through its interaction with fibronectin. 1 Thus thus ADV RB _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 VLA VLa NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 5 5 NUM CD NumType=Card _ _ _ _ 6 fibronectin fibronectin NOUN NN Number=Sing _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 CD4 CD4 NUM CD NumType=Card _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 can can AUX MD VerbForm=Fin _ _ _ _ 12 play play VERB VB VerbForm=Inf _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 complementary complementary ADJ JJ Degree=Pos _ _ _ _ 15 role role NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 CD3-TCR CD3-TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 signal signal NOUN NN Number=Sing _ _ _ _ 21 transduction transduction NOUN NN Number=Sing _ _ _ _ 22 through through ADP IN _ _ _ _ _ 23 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 interaction interaction NOUN NN Number=Sing _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 fibronectin fibronectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2233 # text = Document 003003157 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003157 003003157 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2234 # text = Daidzein and genistein glucuronides in vitro are weakly estrogenic and activate human natural killer cells at nutritionally relevant concentrations. 1 Daidzein Daidzein PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 genistein genistein VERB VB VerbForm=Inf _ _ _ _ 4 glucuronides glucuronide NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 vitro vitro NOUN NN Number=Sing _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 weakly weakly ADV RB _ _ _ _ _ 9 estrogenic estrogenic ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 activate activate ADJ JJ Degree=Pos _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 natural natural ADJ JJ Degree=Pos _ _ _ _ 14 killer killer NOUN NN Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 at at ADP IN _ _ _ _ _ 17 nutritionally nutritionally ADV RB _ _ _ _ _ 18 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 19 concentrations concentration NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2235 # text = Daidzein and genistein glucuronides (DG and GG), major isoflavone metabolites, may be partly responsible for biological effects of isoflavones, such as estrogen receptor binding and natural killer cell (NK) activation or inhibition. 1 Daidzein Daidzein PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 genistein genistein ADJ JJ Degree=Pos _ _ _ _ 4 glucuronides glucuronide NOUN NNS Number=Plur _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 DG dg PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 GG GG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 major major ADJ JJ Degree=Pos _ _ _ _ 12 isoflavone isoflavone NOUN NN Number=Sing _ _ _ _ 13 metabolites metabolite NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 may may AUX MD VerbForm=Fin _ _ _ _ 16 be be AUX VB VerbForm=Inf _ _ _ _ 17 partly partly ADV RB _ _ _ _ _ 18 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 biological biological ADJ JJ Degree=Pos _ _ _ _ 21 effects effect NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 isoflavones isoflavone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 such such ADJ JJ Degree=Pos _ _ _ _ 26 as as ADP IN _ _ _ _ _ 27 estrogen estrogen VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 receptor receptor NOUN NN Number=Sing _ _ _ _ 29 binding binding VERB VBG VerbForm=Ger _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 natural natural ADJ JJ Degree=Pos _ _ _ _ 32 killer killer NOUN NN Number=Sing _ _ _ _ 33 cell cell NOUN NN Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 NK NK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 activation activation NOUN NN Number=Sing _ _ _ _ 38 or or CCONJ CC _ _ _ _ _ 39 inhibition inhibition NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 2236 # text = DG and GG were synthesized using 3-methylcholanthrene-induced rat liver microsomes. 1 DG dg PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 GG GG PROPN NNP Number=Sing _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 synthesized synthesize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 using use VERB VBG VerbForm=Ger _ _ _ _ 7 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 methylcholanthrene-induced methylcholanthrene-induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 rat rat NOUN NN Number=Sing _ _ _ _ 11 liver liver NOUN NN Number=Sing _ _ _ _ 12 microsomes microsome NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 2237 # text = The Km and Vmax for daidzein and genistein were 9.0 and 7.7 micromol/L, and 0.7 and 1.6 micromol/(mg protein. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Km Km PROPN NNP Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 Vmax Vmax PROPN NNP Number=Sing _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 daidzein daidzein NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 genistein genistein NOUN NN Number=Sing _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 9.0 9.0 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 7.7 7.7 NUM CD NumType=Card _ _ _ _ 13 micromol/L micromol/l NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 0.7 0.7 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 1.6 1.6 NUM CD NumType=Card _ _ _ _ 19 micromol micromol NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 mg mg NOUN NN Number=Sing _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2238 # text = min), respectively. 1 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 5 . . PUNCT . _ _ _ _ _ # sent_id = 2239 # text = The absence of ultraviolet absorbance maxima shifts in the presence of sodium acetate confirmed that the synthesized products were 7-O-glucuronides. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 absence absence NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 ultraviolet ultraviolet X ADD _ _ _ _ _ 5 absorbance absorbance X FW Foreign=Yes _ _ _ _ 6 maxima maxima X FW Foreign=Yes _ _ _ _ 7 shifts shift NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 presence presence NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 sodium sodium NOUN NN Number=Sing _ _ _ _ 13 acetate acetate NOUN NN Number=Sing _ _ _ _ 14 confirmed confirm VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 synthesized synthesized ADJ JJ Degree=Pos _ _ _ _ 18 products product NOUN NNS Number=Plur _ _ _ _ 19 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 O of ADP IN Abbr=Yes _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 glucuronides glucuronide NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2240 # text = DG and GG were further purified by a Sephadex LH-20 column. 1 DG dg PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 GG GG PROPN NNP Number=Sing _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 further further ADV RB _ _ _ _ _ 6 purified purify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 Sephadex Sephadex PROPN NNP Number=Sing _ _ _ _ 10 LH Lh PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 20 20 NUM CD NumType=Card _ _ _ _ 13 column column NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 2241 # text = DG and GG competed with the binding of 17beta-(3H) estradiol to estrogen receptors of B6D2F1 mouse uterine cytosol. 1 DG dg PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 GG GG PROPN NNP Number=Sing _ _ _ _ 4 competed compete VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 binding binding NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 17beta 17beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 H h NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 estradiol estradiol NOUN NN Number=Sing _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 estrogen estrogen VERB VB VerbForm=Inf _ _ _ _ 18 receptors receptor NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 B6D2F1 B6D2F1 NOUN NN Number=Sing _ _ _ _ 21 mouse mouse NOUN NN Number=Sing _ _ _ _ 22 uterine uterine NOUN NN Number=Sing _ _ _ _ 23 cytosol cytosol NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2242 # text = The concentrations required for 50% displacement of 17beta-(3H) estradiol (CB50) were: 17beta-estradiol, 1.34 nmol/L; diethylstilbestrol, 1.46 nmol/L; daidzein, 1.6 micromol/L; DG, 14.7 micromol/L; genistein, 0.154 micromol/L; GG, 7.27 micromol/L. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 3 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 % % SYM NN Number=Sing _ _ _ _ 7 displacement displacement NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 17beta 17beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 H h NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 estradiol estradiol NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 CB50 CB50 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 were be VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 20 : : PUNCT : _ _ _ _ _ 21 17beta 17beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 estradiol estradiol NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 1.34 1.34 NUM CD NumType=Card _ _ _ _ 26 nmol/L nmol/l NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ; ; PUNCT , _ _ _ _ _ 28 diethylstilbestrol diethylstilbestrol NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 1.46 1.46 NUM CD NumType=Card _ _ _ _ 31 nmol/L nmol/l NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ; ; PUNCT , _ _ _ _ _ 33 daidzein daidzein NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 1.6 1.6 NUM CD NumType=Card _ _ _ _ 36 micromol/L micromol/l NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 ; ; PUNCT , _ _ _ _ _ 38 DG DG NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 14.7 14.7 NUM CD NumType=Card _ _ _ _ 41 micromol/L micromol/l NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 ; ; PUNCT , _ _ _ _ _ 43 genistein genistein NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 0.154 0.154 NUM CD NumType=Card _ _ _ _ 46 micromol/L micromol/l NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 ; ; PUNCT , _ _ _ _ _ 48 GG GG NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 7.27 7.27 NUM CD NumType=Card _ _ _ _ 51 micromol/L. micromol/L. NOUN NN Number=Sing _ _ _ _ # sent_id = 2243 # text = In human peripheral blood NK cells, genistein at <0.5 micromol/L and DG and GG at 0.1-10 micromol/L enhanced NK cell-mediated K562 cancer cell killing significantly (P < 0.05). 1 In in ADP IN _ _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 4 blood blood NOUN NN Number=Sing _ _ _ _ 5 NK NK PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 genistein genistein ADJ JJ Degree=Pos _ _ _ _ 9 at at ADP IN _ _ _ _ _ 10 < < PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 0.5 0.5 NUM CD NumType=Card _ _ _ _ 12 micromol/L micromol/L NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 DG dg PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 GG GG PROPN NNP Number=Sing _ _ _ _ 17 at at ADP IN _ _ _ _ _ 18 0.1 0.1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - SYM SYM _ _ _ _ SpaceAfter=No 20 10 10 NUM CD NumType=Card _ _ _ _ 21 micromol/L micromol/l NOUN NN Number=Sing _ _ _ _ 22 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 NK NK PROPN NNP Number=Sing _ _ _ _ 24 cell cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 K562 k562 NUM CD NumType=Card _ _ _ _ 28 cancer cancer NOUN NN Number=Sing _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 killing killing VERB VBG VerbForm=Ger _ _ _ _ 31 significantly significantly ADV RB _ _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 P p NOUN NN Number=Sing _ _ _ _ 34 < < PUNCT -LRB- _ _ _ _ _ 35 0.05 0.05 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 2244 # text = At > 0.5 micromol/L, genistein inhibited NK cytotoxicity significantly (P < 0.05). 1 At at ADP IN _ _ _ _ _ 2 > > PUNCT -RRB- _ _ _ _ _ 3 0.5 0.5 NUM CD NumType=Card _ _ _ _ 4 micromol/L micromol/l NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 genistein genistein ADV WRB PronType=Rel _ _ _ _ 7 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 NK NK PROPN NNP Number=Sing _ _ _ _ 9 cytotoxicity cytotoxicity NOUN NN Number=Sing _ _ _ _ 10 significantly significantly ADV RB _ _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 P p NOUN NN Number=Sing _ _ _ _ 13 < < PUNCT -LRB- _ _ _ _ _ 14 0.05 0.05 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2245 # text = The glucuronides only inhibited NK cytotoxicity at 50 micromol/L. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 glucuronides glucuronide NOUN NNS Number=Plur _ _ _ _ 3 only only ADV RB _ _ _ _ _ 4 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 NK NK PROPN NNP Number=Sing _ _ _ _ 6 cytotoxicity cytotoxicity NOUN NN Number=Sing _ _ _ _ 7 at at ADP IN _ _ _ _ _ 8 50 50 NUM CD NumType=Card _ _ _ _ 9 micromol/L. micromol/L. PROPN NNP Number=Sing _ _ _ _ # sent_id = 2246 # text = Isoflavones, and especially the isoflavone glucuronides, enhanced activation of NK cells by interleukin-2 (IL-2), additively. 1 Isoflavones Isoflavone PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 especially especially ADV RB _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 isoflavone isoflavone ADJ JJ Degree=Pos _ _ _ _ 7 glucuronides glucuronide NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 NK NK PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 additively additively ADV RB _ _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2247 # text = At physiological concentrations, DG and GG were weakly estrogenic, and they activated human NK cells in nutritionally relevant concentrations in vitro, probably at a site different from IL-2 action. 1 At at ADP IN _ _ _ _ _ 2 physiological physiological ADJ JJ Degree=Pos _ _ _ _ 3 concentrations concentration NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 DG dg PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 GG GG PROPN NNP Number=Sing _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 weakly weakly ADV RB _ _ _ _ _ 10 estrogenic estrogenic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 14 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 NK Nk PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 nutritionally nutritionally ADV RB _ _ _ _ _ 20 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 21 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 probably probably ADV RB _ _ _ _ _ 26 at at ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 site site NOUN NN Number=Sing _ _ _ _ 29 different different NOUN NN Number=Sing _ _ _ _ 30 from from ADP IN _ _ _ _ _ 31 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 2 2 NUM CD NumType=Card _ _ _ _ 34 action action NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2248 # text = Document 003003160 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003160 003003160 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2249 # text = The human TCF-1 gene encodes a nuclear DNA-binding protein uniquely expressed in normal and neoplastic T-lineage lymphocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 TCF Tcf NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 binding bind VERB VBG VerbForm=Ger _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 uniquely uniquely ADV RB _ _ _ _ _ 15 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 normal normal ADJ JJ Degree=Pos _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 neoplastic neoplastic ADJ JJ Degree=Pos _ _ _ _ 20 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 lineage lineage NOUN NN Number=Sing _ _ _ _ 22 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2250 # text = The TCF-1 gene encodes a putative transcription factor with affinity for a sequence motif occurring in a number of T-cell enhancers. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 TCF Tcf NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 putative putative ADJ JJ Degree=Pos _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 affinity affinity NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 sequence sequence NOUN NN Number=Sing _ _ _ _ 16 motif motif SCONJ IN _ _ _ _ _ 17 occurring occurre VERB VBG VerbForm=Ger _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 number number NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 enhancers enhancer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2251 # text = TCF-1 mRNA was originally found to be expressed in a T cell-specific fashion within a set of human and mouse cell lines. 1 TCF Tcf NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 originally originally ADV RB _ _ _ _ _ 7 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 fashion fashion NOUN NN Number=Sing _ _ _ _ 18 within within ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 set set NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 human human NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 mouse mouse NOUN NN Number=Sing _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2252 # text = In contrast, expression reportedly occurs in multiple nonlymphoid tissues during murine embryogenesis. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 reportedly reportedly VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 occurs occur NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 9 nonlymphoid nonlymphoid ADJ JJ Degree=Pos _ _ _ _ 10 tissues tissue NOUN NNS Number=Plur _ _ _ _ 11 during during ADP IN _ _ _ _ _ 12 murine murine NOUN NN Number=Sing _ _ _ _ 13 embryogenesis embryogenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 2253 # text = We have now raised a monoclonal antibody to document expression and biochemistry of the human TCF-1 protein. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 now now ADV RB _ _ _ _ _ 4 raised raise VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 7 antibody antibody NOUN NN Number=Sing _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 document document VERB VB VerbForm=Inf _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 biochemistry biochemistry NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 TCF TCF NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2254 # text = As expected, the TCF-1 protein was detectable only in cell lines of T lineage. 1 As as ADP IN _ _ _ _ _ 2 expected expect VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 TCF Tcf NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 11 only only ADV RB _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 lines line NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2255 # text = Its expression was always restricted to the nucleus. 1 Its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 always always ADV RB _ _ _ _ _ 5 restricted restrict VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 2256 # text = Immunohistochemistry on a panel of human tissues revealed that the TCF-1 protein was found exclusively in thymocytes and in CD3+ T cells in peripheral lymphoid tissues. 1 Immunohistochemistry Immunohistochemistry VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 on on ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 panel panel NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 tissues tissue NOUN NNS Number=Plur _ _ _ _ 8 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 TCF Tcf NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 exclusively exclusively ADV RB _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 CD3 CD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 + + SYM SYM _ _ _ _ _ 24 T t NUM CD NumType=Card _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 28 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 29 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2257 # text = Western blotting yielded a set of bands ranging from 25 kD to 55 kD, resulting from extensive alternative splicing. 1 Western western ADJ JJ Degree=Pos _ _ _ _ 2 blotting blotting NOUN NN Number=Sing _ _ _ _ 3 yielded yield VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 set set NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 bands band NOUN NNS Number=Plur _ _ _ _ 8 ranging rang VERB VBG VerbForm=Ger _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 25 25 NUM CD NumType=Card _ _ _ _ 11 kD kD NOUN NN Number=Sing _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 55 55 NUM CD NumType=Card _ _ _ _ 14 kD kD NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 resulting result VERB VBG VerbForm=Ger _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 extensive extensive ADJ JJ Degree=Pos _ _ _ _ 19 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 20 splicing splicing NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2258 # text = The TCF-1 protein was detectable in all samples of a set of 22 T-cell malignancies of various stages of maturation, but was absent from a large number of other hematologic neoplasms. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 TCF Tcf NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 all all DET DT _ _ _ _ _ 10 samples sample NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 set set NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 22 22 NUM CD NumType=Card _ _ _ _ 16 T- T- PUNCT : _ _ _ _ SpaceAfter=No 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 malignancies malignancy NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 various various ADJ JJ Degree=Pos _ _ _ _ 21 stages stage NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 maturation maturation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 but but CCONJ CC _ _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 absent absend VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 from from ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 large large ADJ JJ Degree=Pos _ _ _ _ 31 number number NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 other other ADJ JJ Degree=Pos _ _ _ _ 34 hematologic hematologic ADJ JJ Degree=Pos _ _ _ _ 35 neoplasms neoplasm NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 2259 # text = These observations imply a T cell-specific function for TCF-1, a notion corroborated by recent observations on Tcf-1 knock-out mice. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 imply imply ADV RB _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 T T PROPN NNP Number=Sing _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 function function NOUN NN Number=Sing _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 TCF TCF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 notion notion NOUN NN Number=Sing _ _ _ _ 17 corroborated corroborate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 recent recent ADJ JJ Degree=Pos _ _ _ _ 20 observations observation NOUN NNS Number=Plur _ _ _ _ 21 on on ADP IN _ _ _ _ _ 22 Tcf Tcf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 knock knock NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 out out NOUN NN Number=Sing _ _ _ _ 28 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2260 # text = In addition, these results indicate that nuclear TCF-1 expression can serve as a pan-T-lineage marker in the diagnosis of lymphoid malignancies. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 TCF Tcf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 can can AUX MD VerbForm=Fin _ _ _ _ 14 serve serve VERB VB VerbForm=Inf _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 pan-T pan-t NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 lineage lineage NOUN NN Number=Sing _ _ _ _ 20 marker marker NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 diagnosis diagnosis NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 26 malignancies malignancy NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2261 # text = Document 003003164 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003164 003003164 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2262 # text = Transient pseudo-hypoaldosteronism following resection of the ileum: normal level of lymphocytic aldosterone receptors outside the acute phase. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 pseudo pseudo NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 -hypoaldosteronism -hypoaldosteronism NOUN NN Number=Sing _ _ _ _ 4 following follow VERB VBG VerbForm=Ger _ _ _ _ 5 resection resection NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 ileum ileum NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 : : PUNCT : _ _ _ _ _ 10 normal normal ADJ JJ Degree=Pos _ _ _ _ 11 level level NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 lymphocytic lymphocytic ADJ JJ Degree=Pos _ _ _ _ 14 aldosterone aldosterone NOUN NN Number=Sing _ _ _ _ 15 receptors receptor NOUN NNS Number=Plur _ _ _ _ 16 outside outside ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 acute acute ADJ JJ Degree=Pos _ _ _ _ 19 phase phase NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2263 # text = Pseudo-hypoaldosteronism (PHA) is due to mineralocorticoid resistance and manifests as hyponatremia and hyperkalemia with increased plasma aldosterone levels. 1 Pseudo-hypoaldosteronism Pseudo-hypoaldosteronism PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 PHA PHA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 due due ADP IN _ _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 mineralocorticoid mineralocorticoid NOUN NN Number=Sing _ _ _ _ 9 resistance resistance NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 manifests manifest NOUN NNS Number=Plur _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 hyponatremia hyponatremion NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 hyperkalemia hyperkalemion NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 plasma plasma NOUN NN Number=Sing _ _ _ _ 19 aldosterone aldosterone NOUN NN Number=Sing _ _ _ _ 20 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2264 # text = It may be familial or secondary to abnormal renal sodium handling. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 may may AUX MD VerbForm=Fin _ _ _ _ 3 be be AUX VB VerbForm=Inf _ _ _ _ 4 familial familial ADJ JJ Degree=Pos _ _ _ _ 5 or or CCONJ CC _ _ _ _ _ 6 secondary secondary ADJ JJ Degree=Pos _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 abnormal abnormal ADJ JJ Degree=Pos _ _ _ _ 9 renal renal ADJ JJ Degree=Pos _ _ _ _ 10 sodium sodium NOUN NN Number=Sing _ _ _ _ 11 handling handling NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 2265 # text = We report the case of a 54-year-old woman with multifocal cancer of the colon, who developed PHA after subtotal colectomy, ileal resection and jejunostomy. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 case case NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 54 54 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 year year NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 old old ADJ JJ Degree=Pos _ _ _ _ 12 woman woman NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 multifocal multifocal ADJ JJ Degree=Pos _ _ _ _ 15 cancer cancer NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 colon colon NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 who who PRON WP PronType=Rel _ _ _ _ 21 developed develope VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 PHA PHA PROPN NNP Number=Sing _ _ _ _ 23 after after ADP IN _ _ _ _ _ 24 subtotal subtotal ADJ JJ Degree=Pos _ _ _ _ 25 colectomy colectomy NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 ileal ileal ADJ JJ Degree=Pos _ _ _ _ 28 resection resection NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 jejunostomy jejunostomy NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2266 # text = She was treated with 6 g of salt daily to prevent dehydration, which she stopped herself because of reduced fecal losses. 1 She she PRON PRP Case=Nom|Gender=Fem|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 treated treat VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 6 6 NUM CD NumType=Card _ _ _ _ 6 g g NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 salt salt NOUN NN Number=Sing _ _ _ _ 9 daily daily ADV RB _ _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 prevent prevent VERB VB VerbForm=Inf _ _ _ _ 12 dehydration dehydration NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 she she PRON PRP Case=Nom|Gender=Fem|Number=Sing|Person=3|PronType=Prs _ _ _ _ 16 stopped stop VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 herself herself PRON PRP Case=Acc|Gender=Fem|Number=Sing|Person=3|PronType=Prs|Reflex=Yes _ _ _ _ 18 because because ADP IN _ _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 fecal fecal ADJ JJ Degree=Pos _ _ _ _ 22 losses loss NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2267 # text = One month later she was admitted with signs of acute adrenal failure, i.e. fatigue, severe nausea, blood pressure of 80/60 mmHg, extracellular dehydration, hyponatremia (118 mmol/l); hyperkalemia (7.6 mmol/l), increased blood urea nitrogen (BUN) (200 mg/dl) and creatininemia (2.5 mg/dl), and decreased plasma bicarbonates level (HCO3-: 16 mmol/l; N: 27-30). 1 One one NUM CD NumType=Card _ _ _ _ 2 month month NOUN NN Number=Sing _ _ _ _ 3 later later ADV RB _ _ _ _ _ 4 she she PRON PRP Case=Nom|Gender=Fem|Number=Sing|Person=3|PronType=Prs _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 admitted admit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 signs sign NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 acute acute ADJ JJ Degree=Pos _ _ _ _ 11 adrenal adrenal ADJ JJ Degree=Pos _ _ _ _ 12 failure failure NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 i.e. i.e. X FW _ _ _ _ _ 15 fatigue fatigue ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 severe severe ADJ JJ Degree=Pos _ _ _ _ 18 nausea nausea NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 blood blood NOUN NN Number=Sing _ _ _ _ 21 pressure pressure NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 80/60 80/60 NUM CD NumType=Card _ _ _ _ 24 mmHg mmHg NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 extracellular extracelular ADJ JJ Degree=Pos _ _ _ _ 27 dehydration dehydration NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 hyponatremia hyponatremia NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 118 118 NUM CD NumType=Card _ _ _ _ 32 mmol mmol NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 / / PUNCT , _ _ _ _ SpaceAfter=No 34 l l NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 ; ; PUNCT , _ _ _ _ _ 37 hyperkalemia hyperkalemia NOUN NN Number=Sing _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 7.6 7.6 NUM CD NumType=Card _ _ _ _ 40 mmol/ mmol/ PUNCT HYPH _ _ _ _ SpaceAfter=No 41 l l NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 blood blood NOUN NN Number=Sing _ _ _ _ 46 urea urea NOUN NN Number=Sing _ _ _ _ 47 nitrogen nitrogen NOUN NN Number=Sing _ _ _ _ 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 BUN bun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ _ 51 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 52 200 200 NUM CD NumType=Card _ _ _ _ 53 mg mg NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 / / PUNCT , _ _ _ _ SpaceAfter=No 55 dl dl NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 ) ) PUNCT -RRB- _ _ _ _ _ 57 and and CCONJ CC _ _ _ _ _ 58 creatininemia creatininemia NOUN NN Number=Sing _ _ _ _ 59 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 60 2.5 2.5 NUM CD NumType=Card _ _ _ _ 61 mg mg NOUN NN Number=Sing _ _ _ SpaceAfter=No 62 /dl /dl NOUN NN Number=Sing _ _ _ SpaceAfter=No 63 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 64 , , PUNCT , _ _ _ _ _ 65 and and CCONJ CC _ _ _ _ _ 66 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 67 plasma plasma NOUN NN Number=Sing _ _ _ _ 68 bicarbonates bicarbonate NOUN NNS Number=Plur _ _ _ _ 69 level level NOUN NN Number=Sing _ _ _ _ 70 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 71 HCO HCo INTJ UH _ _ _ _ SpaceAfter=No 72 3-: 3-: PUNCT , _ _ _ _ _ 73 16 16 NUM CD NumType=Card _ _ _ _ 74 mmol/l mmol/l NOUN NN Number=Sing _ _ _ SpaceAfter=No 75 ; ; PUNCT , _ _ _ _ _ 76 N and PROPN NNP Number=Sing _ _ _ SpaceAfter=No 77 : : PUNCT : _ _ _ _ _ 78 27 27 NUM CD NumType=Card _ _ _ SpaceAfter=No 79 -30 -30 NUM CD NumType=Card _ _ _ SpaceAfter=No 80 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 81 . . PUNCT . _ _ _ _ _ # sent_id = 2268 # text = However, the plasma cortisol was high (66 microg/100 ml at 10:00 h; N: 8-15) and the ACTH was normal (13 pg/ml, N: 10-60); there was a marked increase in plasma renin activity (>37 ng/ml/h; N supine <3), active renin (869 pg/ml; N supine: 1.120), aldosterone (>2000 pg/ml; N supine <150) and plasma AVP (20 pmol/l; N: 0.5-2.5). 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 plasma plasma NOUN NN Number=Sing _ _ _ _ 5 cortisol cortisol NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 high high ADJ JJ Degree=Pos _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 66 66 NUM CD NumType=Card _ _ _ _ 10 microg microg NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 /100 /100 NUM CD NumType=Card _ _ _ _ 12 ml ml NOUN NN Number=Sing _ _ _ _ 13 at at ADP IN _ _ _ _ _ 14 10:00 10:00 NUM CD NumType=Card _ _ _ _ 15 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ; ; PUNCT , _ _ _ _ _ 17 N and CCONJ CC Abbr=Yes _ _ _ SpaceAfter=No 18 : : PUNCT : _ _ _ _ _ 19 8 8 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - SYM SYM _ _ _ _ SpaceAfter=No 21 15 15 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 ACTH ACth NOUN NN Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 normal normal ADJ JJ Degree=Pos _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 13 13 NUM CD NumType=Card _ _ _ _ 30 pg/ml pg/ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 N N CCONJ CC Abbr=Yes _ _ _ SpaceAfter=No 33 : : PUNCT : _ _ _ _ _ 34 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 -60 -60 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 ; ; PUNCT , _ _ _ _ _ 38 there there PRON EX _ _ _ _ _ 39 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 40 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 41 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 increase increase NOUN NN Number=Sing _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 plasma plasma NOUN NN Number=Sing _ _ _ _ 45 renin renin NOUN NN Number=Sing _ _ _ _ 46 activity activity NOUN NN Number=Sing _ _ _ _ 47 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 48 >37 >37 NUM CD NumType=Card _ _ _ _ 49 ng/ml/h ng/ml/h NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 ; ; PUNCT , _ _ _ _ _ 51 N and CCONJ CC Abbr=Yes _ _ _ _ 52 supine supine NOUN NN Number=Sing _ _ _ _ 53 < < PUNCT -LRB- _ _ _ _ SpaceAfter=No 54 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 55 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 56 , , PUNCT , _ _ _ _ _ 57 active active ADJ JJ Degree=Pos _ _ _ _ 58 renin renin NOUN NN Number=Sing _ _ _ _ 59 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 60 869 869 NUM CD NumType=Card _ _ _ _ 61 pg pg NOUN NN Number=Sing _ _ _ SpaceAfter=No 62 / / PUNCT , _ _ _ _ SpaceAfter=No 63 ml ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 64 ; ; PUNCT , _ _ _ _ _ 65 N and CCONJ CC Abbr=Yes _ _ _ _ 66 supine supine NOUN NN Number=Sing _ _ _ SpaceAfter=No 67 : : PUNCT : _ _ _ _ _ 68 1.120 1.120 NUM CD NumType=Card _ _ _ SpaceAfter=No 69 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 70 , , PUNCT , _ _ _ _ _ 71 aldosterone aldosterone NOUN NN Number=Sing _ _ _ _ 72 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 73 >2000 >2000 NUM CD NumType=Card _ _ _ _ 74 pg pg NOUN NN Number=Sing _ _ _ SpaceAfter=No 75 / / PUNCT , _ _ _ _ SpaceAfter=No 76 ml ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 77 ; ; PUNCT , _ _ _ _ _ 78 N and CCONJ CC Abbr=Yes _ _ _ _ 79 supine supine NOUN NN Number=Sing _ _ _ _ 80 < < PUNCT -LRB- _ _ _ _ SpaceAfter=No 81 150 150 NUM CD NumType=Card _ _ _ SpaceAfter=No 82 ) ) PUNCT -RRB- _ _ _ _ _ 83 and and CCONJ CC _ _ _ _ _ 84 plasma plasma PROPN NNP Number=Sing _ _ _ _ 85 AVP AVP PROPN NNP Number=Sing _ _ _ _ 86 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 87 20 20 NUM CD NumType=Card _ _ _ _ 88 pmol/l pmol/l NOUN NN Number=Sing _ _ _ SpaceAfter=No 89 ; ; PUNCT , _ _ _ _ _ 90 N and CCONJ CC Abbr=Yes _ _ _ SpaceAfter=No 91 : : PUNCT : _ _ _ _ _ 92 0.5 0.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 93 - - SYM SYM _ _ _ _ SpaceAfter=No 94 2.5 2.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 95 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 96 . . PUNCT . _ _ _ _ _ # sent_id = 2269 # text = The plasma ANH level was 38 pmol/l (N supine: 5-25). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 plasma plasma NOUN NN Number=Sing _ _ _ _ 3 ANH ANh DET DT _ _ _ _ _ 4 level level NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 38 38 NUM CD NumType=Card _ _ _ _ 7 pmol/ pmol/ PUNCT HYPH _ _ _ _ SpaceAfter=No 8 l l NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 N not CCONJ CC Abbr=Yes _ _ _ _ 11 supine supine NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 : : PUNCT : _ _ _ _ _ 13 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - SYM SYM _ _ _ _ SpaceAfter=No 15 25 25 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2270 # text = A urinary steroidogram resulted in highly elevated tetrahydrocortisol (THF: 13.3 mg/24h; N: 1.4+/-0.8) with no increase in tetrahydrocortisone (THE: 3.16 mg/24h; N: 2.7+/-2.0) excretion, and with low THE/THF (0.24; N: 1.87+/-0.36) and alpha THF/THF (0.35; N: 0.92+/-0.42) ratios. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 urinary urinary ADJ JJ Degree=Pos _ _ _ _ 3 steroidogram steroidogram NOUN NN Number=Sing _ _ _ _ 4 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 highly highly ADV RB _ _ _ _ _ 7 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 tetrahydrocortisol tetrahydrocortisol NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 THF Thf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 : : PUNCT : _ _ _ _ _ 12 13.3 13.3 NUM CD NumType=Card _ _ _ _ 13 mg/24h mg/24h NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ; ; PUNCT , _ _ _ _ _ 15 N and CCONJ CC Abbr=Yes _ _ _ SpaceAfter=No 16 : : PUNCT : _ _ _ _ _ 17 1.4+/- 1.4+/- SYM SYM _ _ _ _ SpaceAfter=No 18 0.8 0.8 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 no no DET DT _ _ _ _ _ 22 increase increase NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 tetrahydrocortisone tetrahydrocortisone NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 THE the DET DT Definite=Def|PronType=Art _ _ _ SpaceAfter=No 27 : : PUNCT : _ _ _ _ _ 28 3.16 3.16 NUM CD NumType=Card _ _ _ _ 29 mg mg NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 /24h /24h NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ; ; PUNCT , _ _ _ _ _ 32 N and CCONJ CC Abbr=Yes _ _ _ SpaceAfter=No 33 : : PUNCT : _ _ _ _ _ 34 2.7+/- 2.7+/- SYM SYM _ _ _ _ SpaceAfter=No 35 2.0 2.0 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 excretion excretion NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 with with ADP IN _ _ _ _ _ 41 low low ADJ JJ Degree=Pos _ _ _ _ 42 THE the DET DT Definite=Def|PronType=Art _ _ _ SpaceAfter=No 43 / / PUNCT , _ _ _ _ SpaceAfter=No 44 THF Thf NOUN NN Number=Sing _ _ _ _ 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 0.24 0.24 NUM CD NumType=Card _ _ _ SpaceAfter=No 47 ; ; PUNCT , _ _ _ _ _ 48 N and CCONJ CC Abbr=Yes _ _ _ SpaceAfter=No 49 : : PUNCT : _ _ _ _ _ 50 1.87+/-0.36 1.87+/-0.36 X LS _ _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ _ 52 and and CCONJ CC _ _ _ _ _ 53 alpha alpha PROPN NNP Number=Sing _ _ _ _ 54 THF THF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 55 / / PUNCT , _ _ _ _ SpaceAfter=No 56 THF THF PROPN NNP Number=Sing _ _ _ _ 57 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 58 0.35 0.35 NUM CD NumType=Card _ _ _ SpaceAfter=No 59 ; ; PUNCT , _ _ _ _ _ 60 N and CCONJ CC Abbr=Yes _ _ _ SpaceAfter=No 61 : : PUNCT : _ _ _ _ _ 62 0.92+/- 0.92+/- SYM SYM _ _ _ _ SpaceAfter=No 63 0.42 0.42 NUM CD NumType=Card _ _ _ SpaceAfter=No 64 ) ) PUNCT -RRB- _ _ _ _ _ 65 ratios ratio NOUN NNS Number=Plur _ _ _ SpaceAfter=No 66 . . PUNCT . _ _ _ _ _ # sent_id = 2271 # text = The number of mineralocorticoid receptors in mononuclear leukocytes was in the lower normal range for age, while the number of glucocorticoid receptors was reduced. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 number number NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 mineralocorticoid mineralocorticoid ADJ JJ Degree=Pos _ _ _ _ 5 receptors receptor NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 8 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 lower lower ADJ JJR Degree=Cmp _ _ _ _ 13 normal normal ADJ JJ Degree=Pos _ _ _ _ 14 range range NOUN NN Number=Sing _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 age age NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 while while SCONJ IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 number number NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 23 receptors receptor NOUN NNS Number=Plur _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2272 # text = Small-bowel resection in ileostomized patients causes excessive fecal sodium losses and results in chronic sodium depletion with contraction of the plasma volume and severe secondary hyperaldosteronism. 1 Small small ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 bowel bowel NOUN NN Number=Sing _ _ _ _ 4 resection resection NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 ileostomized ileostomize ADJ JJ Degree=Pos _ _ _ _ 7 patients patient NOUN NNS Number=Plur _ _ _ _ 8 causes cause NOUN NNS Number=Plur _ _ _ _ 9 excessive excessive ADJ JJ Degree=Pos _ _ _ _ 10 fecal fecal ADJ JJ Degree=Pos _ _ _ _ 11 sodium sodium NOUN NN Number=Sing _ _ _ _ 12 losses loss NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 results result NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 17 sodium sodium NOUN NN Number=Sing _ _ _ _ 18 depletion depletion NOUN NN Number=Sing _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 contraction contraction NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 plasma plasma NOUN NN Number=Sing _ _ _ _ 24 volume volume NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 severe severe ADJ JJ Degree=Pos _ _ _ _ 27 secondary secondary ADJ JJ Degree=Pos _ _ _ _ 28 hyperaldosteronism hyperaldosteronism NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2273 # text = Nevertheless, this hyperaldosteronism may be associated with hyponatremia and hyperkalemia suggesting PHA related to the major importance of the colon for the absorption of sodium. 1 Nevertheless nevertheless ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 hyperaldosteronism hyperaldosteronism NOUN NN Number=Sing _ _ _ _ 5 may may AUX MD VerbForm=Fin _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 hyponatremia hyponatremia NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 hyperkalemia hyperkalemia NOUN NN Number=Sing _ _ _ _ 12 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 13 PHA Pha PROPN NNP Number=Sing _ _ _ _ 14 related related ADJ JJ Degree=Pos _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 major major ADJ JJ Degree=Pos _ _ _ _ 18 importance importance NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 colon colon NOUN NN Number=Sing _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 absorption absorption NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 sodium sodium NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2274 # text = In conclusion, this case report emphasizes 1) the possibility of a syndrome of acquired PHA with severe hyperkalemia after resection of the ileum and colon responding to oral salt supplementation; 2) the major increase in AVP and the small increase in ANH; 3) the strong increase in urinary THF with low THE/THF and alpha THF/THF ratios; 4) the normal number of lymphocytic mineralocorticoid receptors outside the acute episode. 1 In in ADP IN _ _ _ _ _ 2 conclusion conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 case case NOUN NN Number=Sing _ _ _ _ 6 report report NOUN NN Number=Sing _ _ _ _ 7 emphasizes emphasize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 1 1 X LS _ _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 possibility possibility NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 syndrome syndrome NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 acquired acquired VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 PHA PHa NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 severe severe ADJ JJ Degree=Pos _ _ _ _ 20 hyperkalemia hyperkalemia NOUN NN Number=Sing _ _ _ _ 21 after after ADP IN _ _ _ _ _ 22 resection resection NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 ileum ileum NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 colon colon NOUN NN Number=Sing _ _ _ _ 28 responding respond VERB VBG VerbForm=Ger _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 oral oral ADJ JJ Degree=Pos _ _ _ _ 31 salt salt NOUN NN Number=Sing _ _ _ _ 32 supplementation supplementation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 ; ; PUNCT , _ _ _ _ _ 34 2 2 X LS _ _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 major major ADJ JJ Degree=Pos _ _ _ _ 38 increase increase NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 AVP AVP PROPN NNP Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 small small ADJ JJ Degree=Pos _ _ _ _ 44 increase increase NOUN NN Number=Sing _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 ANH ANH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 ; ; PUNCT , _ _ _ _ _ 48 3 3 X LS _ _ _ _ SpaceAfter=No 49 ) ) PUNCT -RRB- _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 strong strong ADJ JJ Degree=Pos _ _ _ _ 52 increase increase NOUN NN Number=Sing _ _ _ _ 53 in in ADP IN _ _ _ _ _ 54 urinary urinary ADJ JJ Degree=Pos _ _ _ _ 55 THF Thf NOUN NN Number=Sing _ _ _ _ 56 with with ADP IN _ _ _ _ _ 57 low low ADJ JJ Degree=Pos _ _ _ _ 58 THE the DET DT Definite=Def|PronType=Art _ _ _ SpaceAfter=No 59 / / PUNCT , _ _ _ _ SpaceAfter=No 60 THF THF PROPN NNP Number=Sing _ _ _ _ 61 and and CCONJ CC _ _ _ _ _ 62 alpha alpha PROPN NNP Number=Sing _ _ _ _ 63 THF THF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 64 / / PUNCT , _ _ _ _ SpaceAfter=No 65 THF Thf NOUN NN Number=Sing _ _ _ _ 66 ratios ratio NOUN NNS Number=Plur _ _ _ SpaceAfter=No 67 ; ; PUNCT , _ _ _ _ _ 68 4 4 X LS _ _ _ _ SpaceAfter=No 69 ) ) PUNCT -RRB- _ _ _ _ _ 70 the the DET DT Definite=Def|PronType=Art _ _ _ _ 71 normal normal ADJ JJ Degree=Pos _ _ _ _ 72 number number NOUN NN Number=Sing _ _ _ _ 73 of of ADP IN _ _ _ _ _ 74 lymphocytic lymphocytic ADJ JJ Degree=Pos _ _ _ _ 75 mineralocorticoid mineralocorticoid NOUN NN Number=Sing _ _ _ _ 76 receptors receptor NOUN NNS Number=Plur _ _ _ _ 77 outside outside ADP IN _ _ _ _ _ 78 the the DET DT Definite=Def|PronType=Art _ _ _ _ 79 acute acute ADJ JJ Degree=Pos _ _ _ _ 80 episode episode NOUN NN Number=Sing _ _ _ SpaceAfter=No 81 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2275 # text = Document 003003169 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003169 003003169 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2276 # text = Genetic evidence for an additional factor required for erythropoietin-induced signal transduction. 1 Genetic genetic ADJ JJ Degree=Pos _ _ _ _ 2 evidence evidence NOUN NN Number=Sing _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 additional additional ADJ JJ Degree=Pos _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 erythropoietin erythropoietin VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 signal signal NOUN NN Number=Sing _ _ _ _ 13 transduction transduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2277 # text = Erythropoietin (EPO) and its receptor (EPOR) are required for the development of mature erythrocytes. 1 Erythropoietin Erythropoietin PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 EPO EPO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 EPOR Epor PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 development development NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 mature mature ADJ JJ Degree=Pos _ _ _ _ 18 erythrocytes erythrocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2278 # text = After binding of ligand, the EPOR activates a variety of signaling pathways that ultimately control cellular proliferation, survival, and specific gene expression. 1 After after SCONJ IN _ _ _ _ _ 2 binding bind VERB VBG VerbForm=Ger _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 EPOR Epor PROPN NNP Number=Sing _ _ _ _ 8 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 variety variety NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 signaling signaling NOUN NN Number=Sing _ _ _ _ 13 pathways pathway NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 ultimately ultimately ADV RB _ _ _ _ _ 16 control control VERB VB VerbForm=Inf _ _ _ _ 17 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 18 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 survival survival NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 specific specific ADJ JJ Degree=Pos _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2279 # text = Although erythroid progenitors appear to be the principal EPO-responsive cell type in vivo due to the restricted expression of the EPOR, many growth factor-dependent cell lines expressing the EPOR can respond to EPO by activating many or all of these pathways. 1 Although although SCONJ IN _ _ _ _ _ 2 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 3 progenitors progenitor NOUN NNS Number=Plur _ _ _ _ 4 appear appear VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 principal principal NOUN NN Number=Sing _ _ _ _ 9 EPO Epo NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 type type NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 vivo vivo NOUN NN Number=Sing _ _ _ _ 16 due due ADP IN _ _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 EPOR Epor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 many many ADJ JJ Degree=Pos _ _ _ _ 26 growth growth NOUN NN Number=Sing _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 lines line NOUN NNS Number=Plur _ _ _ _ 32 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 EPOR Epor NOUN NN Number=Sing _ _ _ _ 35 can can AUX MD VerbForm=Fin _ _ _ _ 36 respond respond VERB VB VerbForm=Inf _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 EPO EPO PROPN NNP Number=Sing _ _ _ _ 39 by by SCONJ IN _ _ _ _ _ 40 activating activat VERB VBG VerbForm=Ger _ _ _ _ 41 many many ADJ JJ Degree=Pos _ _ _ _ 42 or or CCONJ CC _ _ _ _ _ 43 all all DET DT _ _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 46 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 2280 # text = In the present study, we have identified a cellular context (the interleukin-2 [IL-2]-dependent HT-2 line) in which the EPO stimulation of the EPOR fails to support cellular proliferation, STAT-5 induction, or MAPK activation, despite efficient phosphorylation of the EPOR and JAK2 and inhibition of apoptosis after withdrawal of IL-2. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 11 context context NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 24 HT Ht NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ _ 27 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 which which PRON WDT PronType=Rel _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 EPO EPO PROPN NNP Number=Sing _ _ _ _ 33 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 EPOR EPOR PROPN NNP Number=Sing _ _ _ _ 37 fails fail VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 to to PART TO _ _ _ _ _ 39 support support VERB VB VerbForm=Inf _ _ _ _ 40 cellular celular ADJ JJ Degree=Pos _ _ _ _ 41 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 STAT Stat NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT , _ _ _ _ SpaceAfter=No 45 5 5 NUM CD NumType=Card _ _ _ _ 46 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 or or CCONJ CC _ _ _ _ _ 49 MAPK MAPK PROPN NNP Number=Sing _ _ _ _ 50 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 , , PUNCT , _ _ _ _ _ 52 despite despite ADP IN _ _ _ _ _ 53 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 54 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 55 of of ADP IN _ _ _ _ _ 56 the the DET DT Definite=Def|PronType=Art _ _ _ _ 57 EPOR Epor NOUN NN Number=Sing _ _ _ _ 58 and and CCONJ CC _ _ _ _ _ 59 JAK2 Jak2 NOUN NN Number=Sing _ _ _ _ 60 and and CCONJ CC _ _ _ _ _ 61 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 62 of of ADP IN _ _ _ _ _ 63 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 64 after after ADP IN _ _ _ _ _ 65 withdrawal withdrawal NOUN NN Number=Sing _ _ _ _ 66 of of ADP IN _ _ _ _ _ 67 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 68 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 69 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 70 . . PUNCT . _ _ _ _ _ # sent_id = 2281 # text = Interestingly, when we fused HT-2 cells expressing the EPOR with Ba/F3 cells in a complementation assay, the resulting hybridomas proliferated and potently activated STAT-5 and MAPK in response to EPO. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 when when ADV WRB PronType=Int _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 fused fuse VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 HT HT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 expressing express VERB VBG VerbForm=Ger _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 EPOR Epor NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 Ba/F3 Ba/F3 NUM CD NumType=Card _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 complementation complementation NOUN NN Number=Sing _ _ _ _ 19 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 resulting result VERB VBG VerbForm=Ger _ _ _ _ 23 hybridomas hybridoma NOUN NNS Number=Plur _ _ _ _ 24 proliferated proliferate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 potently potently ADV RB _ _ _ _ _ 27 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 STAT STAT NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 5 5 NUM CD NumType=Card _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 MAPK MAPK PROPN NNP Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 response response NOUN NN Number=Sing _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 EPO EPO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 2282 # text = These data indicate that an unidentified cellular factor is needed to mediate signaling by the EPOR. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 unidentified unidentified ADJ JJ Degree=Pos _ _ _ _ 7 cellular cellular NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 needed need VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 13 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 EPOR Epor NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2283 # text = Moreover, Ba/F3 cells apparently express this factor(s) and somatic fusions can, therefore, confer EPO-responsiveness to HT-2 cells that lack this factor. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Ba/F3 Ba/F3 NUM CD NumType=Card _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 apparently apparently ADV RB _ _ _ _ _ 6 express express VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 s s X AFX _ _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 somatic somatic ADJ JJ Degree=Pos _ _ _ _ 14 fusions fusion NOUN NNS Number=Plur _ _ _ _ 15 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 therefore therefore ADV RB _ _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 confer confer VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 20 EPO Epo NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 HT HT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 that that PRON WDT PronType=Rel _ _ _ _ 29 lack lack VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 31 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2284 # text = Document 003003171 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003171 003003171 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2285 # text = Interleukin-7 can induce the activation of Jak 1, Jak 3 and STAT 5 proteins in murine T cells. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 7 7 NUM CD NumType=Card _ _ _ _ 4 can can AUX MD VerbForm=Fin _ _ _ _ 5 induce induce VERB VB VerbForm=Inf _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 Jak Jak PROPN NNP Number=Sing _ _ _ _ 10 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 Jak Jak PROPN NNP Number=Sing _ _ _ _ 13 3 3 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 STAT Stat VERB VB VerbForm=Inf _ _ _ _ 16 5 5 NUM CD NumType=Card _ _ _ _ 17 proteins protein NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 murine murine ADJ JJ Degree=Pos _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2286 # text = The activation of Janus protein tyrosine kinases (Jak) and STAT (signal transducer and activator of transcription) proteins has recently been linked to the signal transduction mechanism of several cytokines. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Janus Janus PROPN NNP Number=Sing _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 7 kinases kinase NOUN NNS Number=Plur _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 Jak Jak PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 STAT STAT NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 signal signal NOUN NN Number=Sing _ _ _ _ 15 transducer transducer NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 activator activator NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 proteins protein NOUN NNS Number=Plur _ _ _ _ 22 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 recently recently ADV RB _ _ _ _ _ 24 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 25 linked link VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 signal signal NOUN NN Number=Sing _ _ _ _ 29 transduction transduction NOUN NN Number=Sing _ _ _ _ 30 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 several several ADJ JJ Degree=Pos _ _ _ _ 33 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2287 # text = IL-7 was observed to induce a rapid and dose-dependent tyrosine phosphorylation of Jak 1 and Jak 3 and concomitantly, the tyrosine phosphorylation and DNA binding activity of multiple 1 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 7 7 NUM CD NumType=Card _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 induce induce VERB VB VerbForm=Inf _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 rapid rapid NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 14 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 15 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 Jak Jak PROPN NNP Number=Sing _ _ _ _ 18 1 1 NUM CD NumType=Card _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 Jak Jak PROPN NNP Number=Sing _ _ _ _ 21 3 3 NUM CD NumType=Card _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 concomitantly concomitantly ADV RB _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 27 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 DNA dna NOUN NN Number=Sing _ _ _ _ 30 binding bind VERB VBG VerbForm=Ger _ _ _ _ 31 activity activity NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 multiple multiple ADJ JJ Degree=Pos _ _ _ _ # sent_id = 2288 # text = STAT proteins. 1 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 2 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 . . PUNCT . _ _ _ _ _ # sent_id = 2289 # text = The 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ # sent_id = 2290 # text = STAT proteins utilized by IL-7 were identical to those induced by IL-2 and could be identified as various STAT 5 isoforms. 1 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 2 proteins protein NOUN NNS Number=Plur _ _ _ _ 3 utilized utilize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 7 7 NUM CD NumType=Card _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 identical identical ADJ JJ Degree=Pos _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 could could AUX MD VerbForm=Fin _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 as as ADP IN _ _ _ _ _ 22 various various ADJ JJ Degree=Pos _ _ _ _ 23 STAT Stat NOUN NN Number=Sing _ _ _ _ 24 5 5 NUM CD NumType=Card _ _ _ _ 25 isoforms isoform NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2291 # text = Moreover, the induction of both Jak 1 and 3, and STAT 5 activity strongly correlated with the growth-promoting effects of IL-7, suggesting that this signal transduction mechanism may play a key role in IL-7-induced proliferation. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 induction induction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 both both DET DT _ _ _ _ _ 7 Jak Jak PROPN NNP Number=Sing _ _ _ _ 8 1 1 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 STAT Stat VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 14 5 5 NUM CD NumType=Card _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 strongly strongly ADV RB _ _ _ _ _ 17 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 promoting promote VERB VBG VerbForm=Ger _ _ _ _ 23 effects effect NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 30 that that SCONJ IN _ _ _ _ _ 31 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 32 signal signal NOUN NN Number=Sing _ _ _ _ 33 transduction transduction NOUN NN Number=Sing _ _ _ _ 34 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 35 may may AUX MD VerbForm=Fin _ _ _ _ 36 play play VERB VB VerbForm=Inf _ _ _ _ 37 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 key key ADJ JJ Degree=Pos _ _ _ _ 39 role role NOUN NN Number=Sing _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2292 # text = Document 003003172 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003172 003003172 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2293 # text = Tyrosine kinase and cAMP-dependent protein kinase activities in CD40-activated human B lymphocytes. 1 Tyrosine Tyrosine NOUN NN Number=Sing _ _ _ _ 2 kinase kinase NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 kinase kinase NOUN NN Number=Sing _ _ _ _ 9 activities activity NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2294 # text = In vitro, human B lymphocytes undergo long-term proliferation when activated through CD40, a protein expressed on their cell surface. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 7 undergo undergo ADV RB _ _ _ _ _ 8 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 term term NOUN NN Number=Sing _ _ _ _ 11 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 12 when when ADV WRB PronType=Int _ _ _ _ 13 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 through through ADP IN _ _ _ _ _ 15 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 on on ADP IN _ _ _ _ _ 21 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 surface surface NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2295 # text = The nature of CD40-dependent signals in proliferating fresh human Epstein-Barr virus-negative B lymphocytes is currently unknown. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 nature nature NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 7 signals signal NOUN NNS Number=Plur _ _ _ _ 8 in in SCONJ IN _ _ _ _ _ 9 proliferating proliferate VERB VBG VerbForm=Ger _ _ _ _ 10 fresh fresh ADV RB _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 Barr Barr PROPN NNP Number=Sing _ _ _ _ 15 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 negative negative ADJ JJ Degree=Pos _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 currently currently ADV RB _ _ _ _ _ 22 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2296 # text = In this study, a CD40-dependent B cell culture system was used to examine the role of different signal transduction elements. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 CD40 CD40 NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 culture culture NOUN NN Number=Sing _ _ _ _ 12 system system NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 examine examine VERB VB VerbForm=Inf _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 role role NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 different different ADJ JJ Degree=Pos _ _ _ _ 21 signal signal NOUN NN Number=Sing _ _ _ _ 22 transduction transduction NOUN NN Number=Sing _ _ _ _ 23 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2297 # text = Protein kinase C (PKC) depletion generated by a long-term phorbol 12 myristate 13-acetate treatment had weak effects on proliferation. 1 Protein protein NOUN NN Number=Sing _ _ _ _ 2 kinase kinase NOUN NN Number=Sing _ _ _ _ 3 C C PROPN NNP Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 depletion depletion NOUN NN Number=Sing _ _ _ _ 8 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 term term NOUN NN Number=Sing _ _ _ _ 14 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 15 12 12 NUM CD NumType=Card _ _ _ _ 16 myristate myristate NOUN NN Number=Sing _ _ _ _ 17 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 acetate acetate NOUN NN Number=Sing _ _ _ _ 20 treatment treatment NOUN NN Number=Sing _ _ _ _ 21 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 weak weak ADJ JJ Degree=Pos _ _ _ _ 23 effects effect NOUN NNS Number=Plur _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2298 # text = Rather, tyrosine phosphorylation was shown to be directly involved in mediating CD40-dependent signals. 1 Rather Rather ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 tyrosine tyrosine ADJ JJ Degree=Pos _ _ _ _ 4 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 directly directly ADV RB _ _ _ _ _ 10 involved involved ADJ JJ Degree=Pos _ _ _ _ 11 in in SCONJ IN _ _ _ _ _ 12 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 13 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 16 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2299 # text = The use of the protein tyrosine kinase (PTK)-specific inhibitor herbimycin A dramatically decreased cellular proliferation without altering the activity of the human immunodeficiency virus-1 long terminal repeat (HIV-1 LTR), a promoter largely dependent on the binding of nuclear factor kappa B (NF- kappa B). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 use use NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 PTK PTK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 - - PUNCT : _ _ _ _ SpaceAfter=No 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 14 herbimycin herbimycin NOUN NN Number=Sing _ _ _ _ 15 A a X GW _ _ _ _ _ 16 dramatically dramatically ADV RB _ _ _ _ _ 17 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 19 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 20 without without SCONJ IN _ _ _ _ _ 21 altering alter VERB VBG VerbForm=Ger _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 28 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 long long ADJ JJ Degree=Pos _ _ _ _ 32 terminal terminal NOUN NN Number=Sing _ _ _ _ 33 repeat repeat NOUN NN Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ _ 38 LTR Ltr NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 promoter promoter NOUN NN Number=Sing _ _ _ _ 43 largely largely ADV RB _ _ _ _ _ 44 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 45 on on ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 binding binding NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 50 factor factor NOUN NN Number=Sing _ _ _ _ 51 kappa kappa NOUN NN Number=Sing _ _ _ _ 52 B b NOUN NN Number=Sing _ _ _ _ 53 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 54 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 - - PUNCT HYPH _ _ _ _ _ 56 kappa kappa NOUN NN Number=Sing _ _ _ _ 57 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 2300 # text = In contrast, the cAMP-dependent protein kinase specific inhibitor H-89 totally inhibited HIV-1 LTR activity at a concentration as low as 100 nM without affecting cellular proliferation. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 kinase kinase NOUN NN Number=Sing _ _ _ _ 10 specific specific ADJ JJ Degree=Pos _ _ _ _ 11 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 12 H h NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT : _ _ _ _ SpaceAfter=No 14 89 89 NUM CD NumType=Card _ _ _ _ 15 totally totally ADV RB _ _ _ _ _ 16 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 LTR Ltr NOUN NN Number=Sing _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 at at ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 concentration concentration NOUN NN Number=Sing _ _ _ _ 25 as as ADV RB _ _ _ _ _ 26 low low ADJ JJ Degree=Pos _ _ _ _ 27 as as ADP IN _ _ _ _ _ 28 100 100 NUM CD NumType=Card _ _ _ _ 29 nM nm NOUN NN Number=Sing _ _ _ _ 30 without without SCONJ IN _ _ _ _ _ 31 affecting affect VERB VBG VerbForm=Ger _ _ _ _ 32 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 33 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2301 # text = Electrophoretic mobility shift assay (EMSA) and supershift assay using an NF-kappa B binding sequence from the kappa light chain as a probe, revealed that both p65 (RelA) and c-Rel were present in CD40-stimulated B cells. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assay assay NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 EMSA EMSA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 supershift supershift VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 10 assay assay NOUN NN Number=Sing _ _ _ _ 11 using use VERB VBG VerbForm=Ger _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 binding binde VERB VBG VerbForm=Ger _ _ _ _ 18 sequence sequence NOUN NN Number=Sing _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 kappa kappa NOUN NN Number=Sing _ _ _ _ 22 light light NOUN NN Number=Sing _ _ _ _ 23 chain chain NOUN NN Number=Sing _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 probe probe NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 that that SCONJ IN _ _ _ _ _ 30 both both DET DT _ _ _ _ _ 31 p65 p65 NOUN NN Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 RelA RelA NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 Rel Rel NOUN NN Number=Sing _ _ _ _ 39 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 40 present presend ADJ JJ Degree=Pos _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 CD40 CD40 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 - - PUNCT : _ _ _ _ SpaceAfter=No 44 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 B b ADJ JJ Degree=Pos _ _ _ _ 46 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 2302 # text = While PKC depletion did not alter the NF-kappa B level, treatment of B lymphocytes with H-89 or herbimycin A provoked a decrease in the NF-kappa B level. 1 While while SCONJ IN _ _ _ _ _ 2 PKC PKC PROPN NNP Number=Sing _ _ _ _ 3 depletion depletion NOUN NN Number=Sing _ _ _ _ 4 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 alter alter VERB VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 treatment treatment NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 B b ADJ JJ Degree=Pos _ _ _ _ 17 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 H H NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 89 89 NUM CD NumType=Card _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 herbimycin herbimycin NOUN NN Number=Sing _ _ _ _ 24 A and NOUN NN Number=Sing _ _ _ _ 25 provoked provoke VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 decrease decrease NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappa kappa NOUN NN Number=Sing _ _ _ _ 33 B b NOUN NN Number=Sing _ _ _ _ 34 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 2303 # text = These observations establish the importance of different signal transducing pathways leading to CD40 activation of B lymphocytes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 establish establish VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 importance importance NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 different different ADJ JJ Degree=Pos _ _ _ _ 8 signal signal NOUN NN Number=Sing _ _ _ _ 9 transducing transduce VERB VBG VerbForm=Ger _ _ _ _ 10 pathways pathway NOUN NNS Number=Plur _ _ _ _ 11 leading lead VERB VBG VerbForm=Ger _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 B b ADJ JJ Degree=Pos _ _ _ _ 17 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2304 # text = Document 003003176 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003176 003003176 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2305 # text = Effects of 1 alpha, 25-dihydroxyvitamin D3 on the human chronic myelogenous leukemia cell line RWLeu-4. 1 Effects Effects PROPN NNPS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 1 1 NUM CD NumType=Card _ _ _ _ 4 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 25 25 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 dihydroxyvitamin dihydroxyvitamin NOUN NN Number=Sing _ _ _ _ 9 D3 D3 NOUN NN Number=Sing _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 14 myelogenous myelogenous ADJ JJ Degree=Pos _ _ _ _ 15 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 line line NOUN NN Number=Sing _ _ _ _ 18 RWLeu RWLeu NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT : _ _ _ _ SpaceAfter=No 20 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2306 # text = The effects of 1 alpha, 25-dihydroxyvitamin D3 (VD3) on proliferation, differentiation, and macromolecular synthesis in the new Philadelphia chromosome-positive chronic myelogenous leukemia cell line, RWLeu-4, were investigated. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 1 1 NUM CD NumType=Card _ _ _ _ 5 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 25 25 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 dihydroxyvitamin dihydroxyvitamin NOUN NN Number=Sing _ _ _ _ 10 D3 D3 NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 VD3 VD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 macromolecular macromolecular ADJ JJ Degree=Pos _ _ _ _ 21 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 new new ADJ JJ Degree=Pos _ _ _ _ 25 Philadelphia Philadelphia PROPN NNP Number=Sing _ _ _ _ 26 chromosome chromosome NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 positive positive ADJ JJ Degree=Pos _ _ _ _ 29 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 30 myelogenous myelogenous ADJ JJ Degree=Pos _ _ _ _ 31 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 RWLeu RWLeu PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - SYM SYM _ _ _ _ SpaceAfter=No 37 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 40 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 2307 # text = Binding of [3H]VD3 was saturable, with approximately 2000-3000 sites/cell, and half-maximal binding occurring at 0.21-0.33 nM. 1 Binding binding NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 3H] 3h] PUNCT -RRB- _ _ _ _ SpaceAfter=No 5 VD3 VD3 NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 saturable saturable ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 approximately approximately ADV RB _ _ _ _ _ 11 2000 2000 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 3000 3000 NUM CD NumType=Card _ _ _ _ 14 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 half half ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 22 binding binding NOUN NN Number=Sing _ _ _ _ 23 occurring occurre VERB VBG VerbForm=Ger _ _ _ _ 24 at at ADP IN _ _ _ _ _ 25 0.21 0.21 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - SYM SYM _ _ _ _ SpaceAfter=No 27 0.33 0.33 NUM CD NumType=Card _ _ _ _ 28 nM nm NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2308 # text = Treatment of RWLeu-4 cells with VD3 induced 24R-hydroxylase activity, a marker of vitamin D3 responsiveness in many tissues. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 RWLeu RWLeu PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 4 4 NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 VD3 VD3 NUM CD NumType=Card _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 24R 24r NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 hydroxylase hydroxylase NOUN NN Number=Sing _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 marker marker NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 vitamin vitamin ADJ JJ Degree=Pos _ _ _ _ 19 D3 D3 NOUN NN Number=Sing _ _ _ _ 20 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 many many ADJ JJ Degree=Pos _ _ _ _ 23 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2309 # text = Exposure of RWLeu-4 cells to VD3 also inhibited proliferation and DNA synthesis with a 50% effective dose of 3.5-10 nM within 72 h; in addition, protein and RNA synthesis were inhibited by VD3 treatment. 1 Exposure exposure NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 RWLeu RWLeu PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 4 4 NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 VD3 VD3 NUM CD NumType=Card _ _ _ _ 9 also also ADV RB _ _ _ _ _ 10 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 DNA dna NOUN NN Number=Sing _ _ _ _ 14 synthesis synthesis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 % % SYM NN Number=Sing _ _ _ _ 19 effective effective ADJ JJ Degree=Pos _ _ _ _ 20 dose dose NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 3.5 3.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - SYM SYM _ _ _ _ SpaceAfter=No 24 10 10 NUM CD NumType=Card _ _ _ _ 25 nM nm NUM CD NumType=Card _ _ _ _ 26 within within ADP IN _ _ _ _ _ 27 72 72 NUM CD NumType=Card _ _ _ _ 28 h h INTJ UH _ _ _ _ SpaceAfter=No 29 ; ; PUNCT , _ _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 protein protein NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 RNA RNA PROPN NNP Number=Sing _ _ _ _ 36 synthesis synthesis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 38 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 by by ADP IN _ _ _ _ _ 40 VD3 VD3 NUM CD NumType=Card _ _ _ _ 41 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 2310 # text = Exposure of RWLeu-4 cells to 5 nM VD3 for 72 h caused 50% of the cells to differentiate into macrophage/monocyte type cells as judged by nitroblue tetrazolium staining and adherence to plastic. 1 Exposure exposure NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 RWLeu RWLeu PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 4 4 NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 5 5 NUM CD NumType=Card _ _ _ _ 9 nM nm NUM CD NumType=Card _ _ _ _ 10 VD3 VD3 NUM CD NumType=Card _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 72 72 NUM CD NumType=Card _ _ _ _ 13 h h NOUN NN Number=Sing _ _ _ _ 14 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 % % SYM NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 differentiate differentiate VERB VB VerbForm=Inf _ _ _ _ 22 into into ADP IN _ _ _ _ _ 23 macrophage macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 / / PUNCT , _ _ _ _ SpaceAfter=No 25 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 26 type type NOUN NN Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 as as SCONJ IN _ _ _ _ _ 29 judged judge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 nitroblue nitroblue NOUN NN Number=Sing _ _ _ _ 32 tetrazolium tetrazolium NOUN NN Number=Sing _ _ _ _ 33 staining staining NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 adherence adherence NOUN NN Number=Sing _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 plastic plastic NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 2311 # text = Progressive expression of cell surface maturation-specific antigens of the monocyte/macrophage lineage was induced by treatment of RWLeu-4 cells with VD3 for 24 to 72 h at doses that inhibited cellular proliferation. 1 Progressive progressive ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 surface surface NOUN NN Number=Sing _ _ _ _ 6 maturation maturation NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 antigens antigen NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 / / PUNCT , _ _ _ _ SpaceAfter=No 14 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 15 lineage lineage NOUN NN Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 treatment treatment NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 RWLeu RWLeu PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 4 4 NUM CD NumType=Card _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 VD3 VD3 NUM CD NumType=Card _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 24 24 NUM CD NumType=Card _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 72 72 NUM CD NumType=Card _ _ _ _ 31 h h NOUN NN Number=Sing _ _ _ _ 32 at at ADP IN _ _ _ _ _ 33 doses dos NOUN NNS Number=Plur _ _ _ _ 34 that that PRON WDT PronType=Rel _ _ _ _ 35 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 37 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 2312 # text = c-myc RNA, which is constitutively expressed in RWLeu-4 cells, increased after 0.5 h of treatment with 50 nM VD3 and then rapidly decreased to barely detectable levels after 4 h of treatment. 1 c-myc c-myc NOUN NN Number=Sing _ _ _ _ 2 RNA RNa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 constitutively constitutively ADV RB _ _ _ _ _ 7 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 RWLeu RWLeu PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 -4 -4 NUM CD NumType=Card _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 after after ADP IN _ _ _ _ _ 15 0.5 0.5 NUM CD NumType=Card _ _ _ _ 16 h h NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 treatment treatment NOUN NN Number=Sing _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 50 50 NUM CD NumType=Card _ _ _ _ 21 nM nm NOUN NN Number=Sing _ _ _ _ 22 VD3 VD3 NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 then then ADV RB PronType=Dem _ _ _ _ 25 rapidly rapidly ADV RB _ _ _ _ _ 26 decreased decreased VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 barely barely ADV RB _ _ _ _ _ 29 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 30 levels level NOUN NNS Number=Plur _ _ _ _ 31 after after ADP IN _ _ _ _ _ 32 4 4 NUM CD NumType=Card _ _ _ _ 33 h h NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 2313 # text = Finally, the in vitro tyrosine kinase activity associated with the p210bcr-abl oncogene product was decreased approximately 50% by VD3 treatment. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 6 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 p210 p210 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 bcr-abl bcr-abl NOUN NN Number=Sing _ _ _ _ 14 oncogene oncogene NOUN NN Number=Sing _ _ _ _ 15 product product NOUN NN Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 approximately approximately ADV RB _ _ _ _ _ 19 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 % % SYM NN Number=Sing _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 VD3 VD3 NUM CD NumType=Card _ _ _ _ 23 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2314 # text = Because of the presence of a functional receptor-effector system for VD3 and multiple biological responses to the hormone, these cells provide a unique model system with which to probe the specific effects of VD3 on cell growth and differentiation in chronic myelogenous leukemia. 1 Because because ADP IN _ _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 presence presence NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 functional functional ADJ JJ Degree=Pos _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 effector effector NOUN NN Number=Sing _ _ _ _ 11 system system NOUN NN Number=Sing _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 VD3 VD3 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 16 biological biological ADJ JJ Degree=Pos _ _ _ _ 17 responses response NOUN NNS Number=Plur _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 hormone hormone NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 provide provide VERB VB VerbForm=Inf _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 unique unique ADJ JJ Degree=Pos _ _ _ _ 27 model model NOUN NN Number=Sing _ _ _ _ 28 system system NOUN NN Number=Sing _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 which which PRON WDT PronType=Rel _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 probe probe VERB VB VerbForm=Inf _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 specific specific ADJ JJ Degree=Pos _ _ _ _ 35 effects effect NOUN NNS Number=Plur _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 VD3 VD3 NOUN NN Number=Sing _ _ _ _ 38 on on ADP IN _ _ _ _ _ 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 growth growth NOUN NN Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 45 myelogenous myelogenous ADJ JJ Degree=Pos _ _ _ _ 46 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2315 # text = Document 003003178 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003178 003003178 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2316 # text = Cell cycle-dependent initiation and lineage-dependent abrogation of GATA-1 expression in pure differentiating hematopoietic progenitors. 1 Cell cell NOUN NN Number=Sing _ _ _ _ 2 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 -dependent -dependent ADJ JJ Degree=Pos _ _ _ _ 4 initiation initiation NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 9 abrogation abrogation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 pure pure ADJ JJ Degree=Pos _ _ _ _ 17 differentiating differentiating VERB VBG VerbForm=Ger _ _ _ _ 18 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 19 progenitors progenitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2317 # text = The programmed activation/repression of transcription factors in early hematopoietic differentiation has not yet been explored. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 programmed program VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 / / PUNCT , _ _ _ _ SpaceAfter=No 5 repression repression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 early early ADJ JJ Degree=Pos _ _ _ _ 11 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 12 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 13 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 yet yet ADV RB _ _ _ _ _ 16 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 17 explored explore VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2318 # text = The DNA-binding protein GATA-1 is required for normal erythroid development and regulates erythroid-expressed genes in maturing erythroblasts. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 normal normal ADJ JJ Degree=Pos _ _ _ _ 13 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 14 development development NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 maturing mature ADJ JJ Degree=Pos _ _ _ _ 23 erythroblasts erythroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2319 # text = We analyzed GATA-1 expression in early human adult hematopoiesis by using an in vitro system in which "pure" early hematopoietic progenitors are induced to gradual and synchronized differentiation selectively along the erythroid or granulocyte-macrophage pathway by differential treatment with hematopoietic growth factors. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 early early ADJ JJ Degree=Pos _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 adult adult NOUN NN Number=Sing _ _ _ _ 11 hematopoiesis hematopoiesis NOUN NN Number=Sing _ _ _ _ 12 by by SCONJ IN _ _ _ _ _ 13 using use VERB VBG VerbForm=Ger _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 17 system system NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 " " PUNCT `` _ _ _ _ SpaceAfter=No 21 pure pure ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 " " PUNCT '' _ _ _ _ _ 23 early early ADJ JJ Degree=Pos _ _ _ _ 24 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 25 progenitors progenitor NOUN NNS Number=Plur _ _ _ _ 26 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 to to PART TO _ _ _ _ _ 29 gradual gradual VERB VB VerbForm=Inf _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 synchronized synchronize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 33 selectively selectively ADV RB _ _ _ _ _ 34 along along ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 erythroid erythroid NOUN NN Number=Sing _ _ _ _ 37 or or CCONJ CC _ _ _ _ _ 38 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 41 pathway pathway NOUN NN Number=Sing _ _ _ _ 42 by by ADP IN _ _ _ _ _ 43 differential differential ADJ JJ Degree=Pos _ _ _ _ 44 treatment treatment NOUN NN Number=Sing _ _ _ _ 45 with with ADP IN _ _ _ _ _ 46 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 47 growth growth NOUN NN Number=Sing _ _ _ _ 48 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 2320 # text = The GATA-1 gene, though virtually silent in quiescent progenitors, is activated after entrance into the cell cycle upon stimulation with hematopoietic growth factors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 though though SCONJ IN _ _ _ _ _ 8 virtually virtually ADV RB _ _ _ _ _ 9 silent silent ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 quiescent quiescent ADJ JJ Degree=Pos _ _ _ _ 12 progenitors progenitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 after after ADP IN _ _ _ _ _ 17 entrance entrance NOUN NN Number=Sing _ _ _ _ 18 into into ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 cycle cycle NOUN NN Number=Sing _ _ _ _ 22 upon upon ADP IN _ _ _ _ _ 23 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 26 growth growth NOUN NN Number=Sing _ _ _ _ 27 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2321 # text = Subsequently, increasing expression along the erythroid pathway contrasts with an abrupt downregulation in the granulocyte-macrophage lineage. 1 Subsequently subsequently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 along along ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 8 pathway pathway NOUN NN Number=Sing _ _ _ _ 9 contrasts contrast VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 abrupt abrupt ADJ JJ Degree=Pos _ _ _ _ 13 downregulation downregulation NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 19 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2322 # text = These results suggest a microenvironment-directed, two-step model for GATA-1 expression in differentiating hematopoietic progenitors that involves (i) cycle-dependent initiation and (ii) lineage-dependent maintenance or suppression. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 microenvironment microenvironment NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 step step NOUN NN Number=Sing _ _ _ _ 12 model model NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 in in SCONJ IN _ _ _ _ _ 19 differentiating differentiat VERB VBG VerbForm=Ger _ _ _ _ 20 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 21 progenitors progenitor NOUN NNS Number=Plur _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 i i PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 30 initiation initiation NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 ii ii X LS _ _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 38 maintenance maintenance NOUN NN Number=Sing _ _ _ _ 39 or or CCONJ CC _ _ _ _ _ 40 suppression suppression NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 2323 # text = Hypothetically, on/off switches of lineage-restricted transactivators may underlie the binary fate decisions of hematopoietic progenitors. 1 Hypothetically Hypothetically ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 on on ADP IN _ _ _ _ SpaceAfter=No 4 / / PUNCT , _ _ _ _ SpaceAfter=No 5 off off ADP IN _ _ _ _ _ 6 switches switche NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 transactivators transactivator NOUN NNS Number=Plur _ _ _ _ 12 may may AUX MD VerbForm=Fin _ _ _ _ 13 underlie underlie VERB VB VerbForm=Inf _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 binary binary ADJ JJ Degree=Pos _ _ _ _ 16 fate fate NOUN NN Number=Sing _ _ _ _ 17 decisions decision NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 20 progenitors progenitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2324 # text = Document 003003184 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003184 003003184 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2325 # text = HIV-1 envelope glycoproteins induce activation of activated protein-1 in CD4+ T cells [published erratum appears in J Biol Chem 1995 Dec 1;270(48):29038] Activation of CD4 positive T cells is a primary requirement for human immunodeficiency virus (HIV) entry, efficient HIV replication, and progression to AIDS, Utilizing CD4 positive T cell lines and purified T cells from normal individuals, we have demonstrated that native envelope glycoproteins of HIV, gp 160, can induce activation of transcription factor, activated protein-1 (AP-1). 1 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 envelope envelope NOUN NN Number=Sing _ _ _ _ 5 glycoproteins glycoprotein NOUN NNS Number=Plur _ _ _ _ 6 induce induce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 + + SYM SYM _ _ _ _ _ 16 T t NUM CD NumType=Card _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 published publish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 erratum erratum NOUN NN Number=Sing _ _ _ _ 21 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 J j PROPN NNP Number=Sing _ _ _ _ 24 Biol Biol PROPN NNP Number=Sing _ _ _ _ 25 Chem Chem PROPN NNP Number=Sing _ _ _ _ 26 1995 1995 NUM CD NumType=Card _ _ _ _ 27 Dec Dec PROPN NNP Number=Sing _ _ _ _ 28 1;270 1;270 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 48 48 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 :29038 :29038 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n 34 Activation Activation NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 CD4 CD4 NUM CD NumType=Card _ _ _ _ 37 positive positive ADJ JJ Degree=Pos _ _ _ _ 38 T t PROPN NNP Number=Sing _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ _ 40 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 41 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 primary primary ADJ JJ Degree=Pos _ _ _ _ 43 requirement requirement NOUN NN Number=Sing _ _ _ _ 44 for for ADP IN _ _ _ _ _ 45 human human ADJ JJ Degree=Pos _ _ _ _ 46 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 47 virus virus NOUN NN Number=Sing _ _ _ _ 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ _ 51 entry entry NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 54 HIV Hiv NOUN NN Number=Sing _ _ _ _ 55 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 , , PUNCT , _ _ _ _ _ 57 and and CCONJ CC _ _ _ _ _ 58 progression progression NOUN NN Number=Sing _ _ _ _ 59 to to ADP IN _ _ _ _ _ 60 AIDS aids NOUN NNS Number=Plur _ _ _ SpaceAfter=No 61 , , PUNCT , _ _ _ _ _ 62 Utilizing Utilize PROPN NNP Number=Sing _ _ _ _ 63 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 64 positive positive ADJ JJ Degree=Pos _ _ _ _ 65 T t NUM CD NumType=Card _ _ _ _ 66 cell cell NOUN NN Number=Sing _ _ _ _ 67 lines line NOUN NNS Number=Plur _ _ _ _ 68 and and CCONJ CC _ _ _ _ _ 69 purified purify ADJ JJ Degree=Pos _ _ _ _ 70 T t PROPN NNP Number=Sing _ _ _ _ 71 cells cell NOUN NNS Number=Plur _ _ _ _ 72 from from ADP IN _ _ _ _ _ 73 normal normal ADJ JJ Degree=Pos _ _ _ _ 74 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 75 , , PUNCT , _ _ _ _ _ 76 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 77 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 78 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 79 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 80 native native ADJ JJ Degree=Pos _ _ _ _ 81 envelope envelope NOUN NN Number=Sing _ _ _ _ 82 glycoproteins glycoprotein NOUN NNS Number=Plur _ _ _ _ 83 of of ADP IN _ _ _ _ _ 84 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 85 , , PUNCT , _ _ _ _ _ 86 gp gp NOUN NN Number=Sing _ _ _ _ 87 160 160 NUM CD NumType=Card _ _ _ SpaceAfter=No 88 , , PUNCT , _ _ _ _ _ 89 can can AUX MD VerbForm=Fin _ _ _ _ 90 induce induce VERB VB VerbForm=Inf _ _ _ _ 91 activation activation NOUN NN Number=Sing _ _ _ _ 92 of of ADP IN _ _ _ _ _ 93 transcription transcription NOUN NN Number=Sing _ _ _ _ 94 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 95 , , PUNCT , _ _ _ _ _ 96 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 97 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 98 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 99 1 1 NUM CD NumType=Card _ _ _ _ 100 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 101 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 102 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 103 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 104 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 105 . . PUNCT . _ _ _ _ _ # sent_id = 2326 # text = The stimulatory effects of gp160 are mediated through the CD4 molecule, since treatment of gp160 with soluble CD4-IgG abrogates its activity, and CD4 negative T cell lines fail to be stimulated with gp160. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 stimulatory stimulatory ADJ JJ Degree=Pos _ _ _ _ 3 effects effect NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 gp160 gp160 NOUN NN Number=Sing _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 through through ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 11 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 since since ADP IN _ _ _ _ _ 14 treatment treatment NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 gp160 gp160 NUM CD NumType=Card _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 19 CD4 CD4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 IgG IgG PRON NN Number=Sing _ _ _ _ 22 abrogates abrogate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 CD4 CD4 NUM CD NumType=Card _ _ _ _ 28 negative negative ADJ JJ Degree=Pos _ _ _ _ 29 T t NOUN NN Number=Sing _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 lines line NOUN NNS Number=Plur _ _ _ _ 32 fail fail VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 to to PART TO _ _ _ _ _ 34 be be AUX VB VerbForm=Inf _ _ _ _ 35 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 gp160 gp160 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 2327 # text = Immunoprecipitation of the gp 160-induced nuclear extracts with polyclonal antibodies to Fos and Jun proteins indicates that AP-1 complex is comprised of members of these family of proteins. 1 Immunoprecipitation Immunoprecipitation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 gp gp NOUN NN Number=Sing _ _ _ _ 5 160 160 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT : _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 extracts extract NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 polyclonal polyclonal ADJ JJ Degree=Pos _ _ _ _ 12 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 Fos Fos PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 Jun Jun PROPN NNP Number=Sing _ _ _ _ 17 proteins protein VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 indicates indicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 20 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 complex complex NOUN NN Number=Sing _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 comprised comprise VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 members member NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 30 family family NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 2328 # text = The gp160-induced AP-1 complex is dependent upon protein tyrosine phosphorylation and is protein synthesis-independent. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 gp160 gp160 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 complex complex NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 11 upon upon ADP IN _ _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 14 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 synthesis synthesis ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 independent independent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2329 # text = This stimulation can also be abolished by inhibitors of protein kinase C, but it is unaffected by calcium channel blocker or cyclosporine A. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 3 can can AUX MD VerbForm=Fin _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 abolished abolish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 unaffected unaffect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 calcium calcium NOUN NN Number=Sing _ _ _ _ 20 channel channel NOUN NN Number=Sing _ _ _ _ 21 blocker blocker NOUN NN Number=Sing _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 cyclosporine cyclosporine NOUN NN Number=Sing _ _ _ _ 24 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2330 # text = This gp160 treatment adversely affects the functional capabilities of T cells: pre-treatment of CD4+ 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 gp160 gp160 NUM CD NumType=Card _ _ _ _ 3 treatment treatment NOUN NN Number=Sing _ _ _ _ 4 adversely adversely ADV RB _ _ _ _ _ 5 affects affect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 functional functional ADJ JJ Degree=Pos _ _ _ _ 8 capabilities capability NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 : : PUNCT : _ _ _ _ _ 13 pre-treatment pre-treatment NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 + + SYM SYM _ _ _ _ _ # sent_id = 2331 # text = T cells with gp160 for 4 h at 37 degrees C inhibited anti-CD3-induced interleukin-2 secretion. 1 T t ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 gp160 gp160 NUM CD NumType=Card _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 4 4 NUM CD NumType=Card _ _ _ _ 7 h h NOUN NN Number=Sing _ _ _ _ 8 at at ADP IN _ _ _ _ _ 9 37 37 NUM CD NumType=Card _ _ _ _ 10 degrees degree NOUN NNS Number=Plur _ _ _ _ 11 C class PROPN NNP Number=Sing _ _ _ _ 12 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 -induced -induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 secretion secretion NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2332 # text = Effects similar to gp160 were seen with anti-CD4 mAb. 1 Effects Effect PROPN NNPS Number=Plur _ _ _ _ 2 similar similar ADJ JJ Degree=Pos _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 gp160 gp160 NUM CD NumType=Card _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 anti-CD4 anti-CD4 NUM CD NumType=Card _ _ _ _ 9 mAb mAb NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 2333 # text = The aberrant activation of AP-1 by gp160 in CD4 positive T cells could result in up-regulation of cytokines containing AP-1 sites, e.g. interleukin-3 and granulocyte macrophage colony-stimulating factor, and concurrently lead to T cell unresponsiveness by inhibiting interleukin-2 secretion. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 aberrant aberrant ADJ JJ Degree=Pos _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 gp160 gp160 NUM CD NumType=Card _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 CD4 CD4 NUM CD NumType=Card _ _ _ _ 12 positive positive ADJ JJ Degree=Pos _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 could could AUX MD VerbForm=Fin _ _ _ _ 16 result result VERB VB VerbForm=Inf _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 up up ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 regulation regulation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 23 containing contain VERB VBG VerbForm=Ger _ _ _ _ 24 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 e.g. e.g. X FW _ _ _ _ _ 30 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 3 3 NUM CD NumType=Card _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 granulocyte granulocyte NOUN NN Number=Sing _ _ _ _ 35 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 36 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 39 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 concurrently concurrently ADV RB _ _ _ _ _ 43 lead lead ADV RB _ _ _ _ _ 44 to to ADP IN _ _ _ _ _ 45 T t PROPN NNP Number=Sing _ _ _ _ 46 cell cell PROPN NNP Number=Sing _ _ _ _ 47 unresponsiveness unresponsiveness NOUN NN Number=Sing _ _ _ _ 48 by by SCONJ IN _ _ _ _ _ 49 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 50 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 2 2 NUM CD NumType=Card _ _ _ _ 53 secretion secretion NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2334 # text = Document 003003190 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003190 003003190 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2335 # text = [The role of glucocorticoid receptors and HLA antigens in the pathogenesis of Cushing's syndrome] Lymphocytic levels of glucocorticoid receptors were evaluated in 114 patients suffering from Icenko-Cushing's syndrome. 1 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 The the DET DT Definite=Def|PronType=Art _ _ _ _ 3 role role NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 6 receptors receptor NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 HLA Hla ADJ JJ Degree=Pos _ _ _ _ 9 antigens antigen NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 Cushing Cushing PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 's 's PART POS _ _ _ _ _ 16 syndrome syndrome NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n 18 Lymphocytic Lymphocytic ADJ JJ Degree=Pos _ _ _ _ 19 levels level NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 22 receptors receptor NOUN NNS Number=Plur _ _ _ _ 23 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 evaluated evaluate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 114 114 NUM CD NumType=Card _ _ _ _ 27 patients patient NOUN NNS Number=Plur _ _ _ _ 28 suffering suffer VERB VBG VerbForm=Ger _ _ _ _ 29 from from ADP IN _ _ _ _ _ 30 Icenko Icenko PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 Cushing Cushing PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 's 's PART POS _ _ _ _ _ 34 syndrome syndrome NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 2336 # text = Incidence of HLA antigens was determined in 94 of them. 1 Incidence Incidence NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HLA Hla PROPN NNP Number=Sing _ _ _ _ 4 antigens antigen NOUN NNS Number=Plur _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 94 94 NUM CD NumType=Card _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 2337 # text = A significant rise of A10 and B27 antigen incidence compared to that in normal subjects allows these antigens to be considered genetic markers of Icenko-Cushing's syndrome. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 significant significant ADJ JJ Degree=Pos _ _ _ _ 3 rise rise NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 A10 A10 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 B27 B27 NUM CD NumType=Card _ _ _ _ 8 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 9 incidence incidence NOUN NN Number=Sing _ _ _ _ 10 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 normal normal ADJ JJ Degree=Pos _ _ _ _ 15 subjects subjects NOUN NNS Number=Plur _ _ _ _ 16 allows allow VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 18 antigens antigen NOUN NNS Number=Plur _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 be be AUX VB VerbForm=Inf _ _ _ _ 21 considered consider VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 23 markers marker NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 Icenko Icenko PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 Cushing Cushing PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 's 's PART POS _ _ _ _ _ 29 syndrome syndrome NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2338 # text = The levels of glucocorticoid receptors in lymphocytes of the patients are lower than in normal subjects both in the active stage of the disease and following bilateral total adrenalectomy. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 5 receptors receptor NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 patients patient NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 lower lower ADJ JJR Degree=Cmp _ _ _ _ 13 than than ADP IN _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 normal normal ADJ JJ Degree=Pos _ _ _ _ 16 subjects subjects NOUN NNS Number=Plur _ _ _ _ 17 both both CCONJ CC _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 active active ADJ JJ Degree=Pos _ _ _ _ 21 stage stage NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 disease disease NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 following follow VERB VBG VerbForm=Ger _ _ _ _ 27 bilateral bilateral ADJ JJ Degree=Pos _ _ _ _ 28 total total ADJ JJ Degree=Pos _ _ _ _ 29 adrenalectomy adrenalectomy NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2339 # text = The patients carrying B27 antigen had lymphocytic receptor concentrations under the levels of such in patients free of the antigen carriage. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 patients patient NOUN NN Number=Sing _ _ _ _ 3 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 4 B27 B27 NUM CD NumType=Card _ _ _ _ 5 antigen antigen NOUN NNS Number=Plur _ _ _ _ 6 had have VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 lymphocytic lymphocytic ADJ JJ Degree=Pos _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 10 under under ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 levels level NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 such such ADJ JJ Degree=Pos _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 patients patient NOUN NNS Number=Plur _ _ _ _ 17 free free ADJ JJ Degree=Pos _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 21 carriage carriage NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2340 # text = Antigen B27 seems to be a cause of lower levels of glucocorticoid receptors in blood lymphocytes. 1 Antigen Antigen ADJ JJ Degree=Pos _ _ _ _ 2 B27 B27 NOUN NN Number=Sing _ _ _ _ 3 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 cause cause NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 lower lower ADJ JJ Degree=Pos _ _ _ _ 10 levels level NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 13 receptors receptor NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 blood blood NOUN NN Number=Sing _ _ _ _ 16 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2341 # text = Document 003003197 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003197 003003197 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2342 # text = Human immunodeficiency virus-associated Hodgkin's disease derives from post-germinal center B cells. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 3 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 -associated -associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 Hodgkin Hodgkin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 's 's PART POS _ _ _ _ _ 7 disease disease NOUN NN Number=Sing _ _ _ _ 8 derives derive VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 post post X AFX _ _ _ _ SpaceAfter=No 11 -germinal -germinal ADJ JJ Degree=Pos _ _ _ _ 12 center center NOUN NN Number=Sing _ _ _ _ 13 B b ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2343 # text = Human immunodeficiency virus-associated Hodgkin's disease (HIV-HD) displays several peculiarities when compared with HD of the general population. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 3 virus-associated virus-associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 Hodgkin Hodgkin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 's 's PART POS _ _ _ _ _ 6 disease disease NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 HD hd NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 displays display VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 several several ADJ JJ Degree=Pos _ _ _ _ 14 peculiarities peculiarity NOUN NNS Number=Plur _ _ _ _ 15 when when ADV WRB PronType=Int _ _ _ _ 16 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 HD hd NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 general general ADJ JJ Degree=Pos _ _ _ _ 22 population population NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2344 # text = These include overrepresentation of clinically aggressive histologic types and frequent infection of Reed-Sternberg (RS) cells by Epstein-Barr virus (EBV). 1 These these PRON DT Number=Plur|PronType=Dem _ _ _ _ 2 include include VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 overrepresentation overrepresentation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 clinically clinically ADV RB _ _ _ _ _ 6 aggressive aggressive ADJ JJ Degree=Pos _ _ _ _ 7 histologic histologic NOUN NN Number=Sing _ _ _ _ 8 types type NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 frequent frequent ADJ JJ Degree=Pos _ _ _ _ 11 infection infection NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Reed ree NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 Sternberg Sternberg NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 RS rs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 Barr Barr PROPN NNP Number=Sing _ _ _ _ 24 virus virus NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2345 # text = Recently, we have reported that the histogenesis of HD of the general population may be assessed by monitoring the expression pattern of BCL-6, a transcription factor expressed in germinal center (GC) B cells, and of CD138/syndecan-1 (syn-1), a proteoglycan associated with post-GC, terminal B-cell differentiation. 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 reported report VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 histogenesis histogenesis NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 HD hd NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 general general ADJ JJ Degree=Pos _ _ _ _ 14 population population NOUN NN Number=Sing _ _ _ _ 15 may may AUX MD VerbForm=Fin _ _ _ _ 16 be be AUX VB VerbForm=Inf _ _ _ _ 17 assessed assess VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by SCONJ IN _ _ _ _ _ 19 monitoring monitor VERB VBG VerbForm=Ger _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 pattern pattern NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 BCL BCL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ _ 31 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 germinal germinal ADJ JJ Degree=Pos _ _ _ _ 34 center center NOUN NN Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 GC GC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 B b ADJ JJ Degree=Pos _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 CD138/syndecan CD138/syndecan PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 1 1 NUM CD NumType=Card _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 syn syn NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 51 , , PUNCT , _ _ _ _ _ 52 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 53 proteoglycan proteoglycan ADJ JJ Degree=Pos _ _ _ _ 54 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 55 with with ADP IN _ _ _ _ _ 56 post post NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 -GC -gc NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 , , PUNCT , _ _ _ _ _ 59 terminal terminal NOUN NN Number=Sing _ _ _ _ 60 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 61 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 62 cell cell NOUN NN Number=Sing _ _ _ _ 63 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 64 . . PUNCT . _ _ _ _ _ # sent_id = 2346 # text = In this study, we have applied these two markers to the study of HIV-HD histogenesis and correlated their expression status to the virologic features of this disease. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 applied apply VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 9 two two NUM CD NumType=Card _ _ _ _ 10 markers marker NOUN NNS Number=Plur _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 study study NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 HD HD NOUN NN Number=Sing _ _ _ _ 18 histogenesis histogenesis NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 correlated correlate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 status status NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 virologic virologic NOUN NN Number=Sing _ _ _ _ 27 features feature NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 30 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2347 # text = We have found that RS cells of all histologic categories of HIV-HD consistently display the BCL-6(-)/syn-1(+) phenotype and thus reflect post-GC B cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 RS rs ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 all all DET DT _ _ _ _ _ 9 histologic histologic ADJ JJ Degree=Pos _ _ _ _ 10 categories category NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 HD HD PROPN NNP Number=Sing _ _ _ _ 15 consistently consistently ADV RB _ _ _ _ _ 16 display display VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 BCL BCL NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 -) -) PUNCT . _ _ _ _ SpaceAfter=No 23 /syn /syn NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 +) +) SYM NFP _ _ _ _ _ 27 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 thus thus ADV RB _ _ _ _ _ 30 reflect reflect VERB VB VerbForm=Inf _ _ _ _ 31 post post X AFX _ _ _ _ SpaceAfter=No 32 -GC -gc ADJ JJ Degree=Pos _ _ _ _ 33 B b NOUN NN Number=Sing _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 2348 # text = Although BCL-6(-)/syn-1(+)RS cells of HIV-HD express CD40, they are not surrounded by CD40 ligand-positive (CD40L+) reactive T lymphocytes, which, in HD of the general population, are thought to regulate the disease phenotype through CD40/CD40L interactions. 1 Although although SCONJ IN _ _ _ _ _ 2 BCL BCL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 -6( -6( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 -) -) PUNCT . _ _ _ _ SpaceAfter=No 5 /syn /syn VERB VB Mood=Imp|VerbForm=Fin _ _ _ SpaceAfter=No 6 -1(+) -1(+) SYM NFP _ _ _ _ SpaceAfter=No 7 RS R ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 HD HD NOUN NN Number=Sing _ _ _ _ 13 express express NOUN NN Number=Sing _ _ _ _ 14 CD40 CD40 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 not not PART RB _ _ _ _ _ 19 surrounded surround VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 CD40 CD40 NUM CD NumType=Card _ _ _ _ 22 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 positive positive ADJ JJ Degree=Pos _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 CD40L Cd40l NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 + + SYM SYM _ _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 30 T t NOUN NN Number=Sing _ _ _ _ 31 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 which which PRON WDT PronType=Rel _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 HD hd NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 general general ADJ JJ Degree=Pos _ _ _ _ 40 population population NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 43 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 44 to to PART TO _ _ _ _ _ 45 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 disease disease NOUN NN Number=Sing _ _ _ _ 48 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 49 through through ADP IN _ _ _ _ _ 50 CD40/CD40L Cd40/cd40l NOUN NN Number=Sing _ _ _ _ 51 interactions interaction NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 2349 # text = Conversely, RS cells of virtually all HIV-HD express the EBV-encoded latent membrane protein 1 (LMP1), which, being functionally homologous to CD40, may contribute, at least in part, to the modulation of the HIV-HD phenotype. 1 Conversely Conversely ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 RS rs ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 virtually virtually ADV RB _ _ _ _ _ 7 all all DET DT _ _ _ _ _ 8 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 HD HD NOUN NN Number=Sing _ _ _ _ 11 express express NOUN NN Number=Sing _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 latent latent ADJ JJ Degree=Pos _ _ _ _ 17 membrane membrane NOUN NN Number=Sing _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 1 1 NUM CD NumType=Card _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 LMP1 Lmp1 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 being be AUX VBG VerbForm=Ger _ _ _ _ 27 functionally functionally ADV RB _ _ _ _ _ 28 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 may may AUX MD VerbForm=Fin _ _ _ _ 33 contribute contribute VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 at at ADV RB _ _ _ _ _ 36 least least ADV RBS Degree=Sup _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 part part NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 to to ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 modulation modulation NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 HD hd NOUN NN Number=Sing _ _ _ _ 48 phenotype phenotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2350 # text = Document 003003202 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003202 003003202 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2351 # text = Inhibition of nuclear factor kappa 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 2352 # text = B subunit p65 mRNA accumulation in lipopolysaccharide-stimulated human monocytic cells treated with sodium salicylate. 1 B b NOUN NN Number=Sing _ _ _ _ 2 subunit subunit NOUN NN Number=Sing _ _ _ _ 3 p65 p65 NUM CD NumType=Card _ _ _ _ 4 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 5 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 sodium sodium NOUN NN Number=Sing _ _ _ _ 16 salicylate salicylate NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2353 # text = Lipopolysaccharide is one of the most potent trigger substances for monocytes and macrophages causing secretion of inflammatory mediators such as tumor necrosis factor and interleukin-1. 1 Lipopolysaccharide Lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 one one NUM CD NumType=Card _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 most most ADV RBS _ _ _ _ _ 7 potent potent ADJ JJ Degree=Pos _ _ _ _ 8 trigger trigger NOUN NN Number=Sing _ _ _ _ 9 substances substance NOUN NNS Number=Plur _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 14 causing cause VERB VBG VerbForm=Ger _ _ _ _ 15 secretion secretion NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 18 mediators mediator NOUN NNS Number=Plur _ _ _ _ 19 such such ADJ JJ Degree=Pos _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 tumor tumor NOUN NN Number=Sing _ _ _ _ 22 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2354 # text = The nature of the nuclear factors involved in regulation of these cytokine genes is still unknown. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 nature nature NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 factors factor NOUN NNS Number=Plur _ _ _ _ 7 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 regulation regulation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 12 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 still still ADV RB _ _ _ _ _ 16 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2355 # text = Nuclear factor kappa B (NF-kappa B; heterodimer of p50 and p65) proteins have been suggested to play an important role in gene transcription of inflammatory mediators when monocytes are stimulated with lipopolysaccharide. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ; ; PUNCT , _ _ _ _ _ 11 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 p50 p50 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 proteins protein NOUN NNS Number=Plur _ _ _ _ 18 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 20 suggested suggest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 play play VERB VB VerbForm=Inf _ _ _ _ 23 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 important important ADJ JJ Degree=Pos _ _ _ _ 25 role role NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 gene gene ADJ JJ Degree=Pos _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 31 mediators mediator NOUN NNS Number=Plur _ _ _ _ 32 when when ADV WRB PronType=Int _ _ _ _ 33 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 34 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 2356 # text = Nonsteroidal anti-inflammatory drugs such as salicylates have been used to treat symptoms of inflammation, and a new mechanism of drug action was suggested recently. 1 Nonsteroidal Nonsteroidal ADJ JJ Degree=Pos _ _ _ _ 2 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 3 drugs drug NOUN NNS Number=Plur _ _ _ _ 4 such such ADJ JJ Degree=Pos _ _ _ _ 5 as as SCONJ IN _ _ _ _ _ 6 salicylates salicylate NOUN NNS Number=Plur _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 9 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 treat treat VERB VB VerbForm=Inf _ _ _ _ 12 symptoms symptom NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 new new ADJ JJ Degree=Pos _ _ _ _ 19 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 drug drug NOUN NN Number=Sing _ _ _ _ 22 action action NOUN NN Number=Sing _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 suggested suggest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 recently recently ADV RB _ _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2357 # text = Salicylates have been shown to inhibit lipopolysaccharide-induced gene transcription via inhibition of NF-kappa B activation by preventing the degradation of NF-kappa B inhibitor "I kappa B", blocking the translocation of NF-kappa B into the nuclear compartment. 1 Salicylates Salicylate NOUN NNS Number=Plur _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 7 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 via via ADP IN _ _ _ _ _ 13 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B b PROPN NNP Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 by by SCONJ IN _ _ _ _ _ 21 preventing prevent VERB VBG VerbForm=Ger _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 degradation degradation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ _ 29 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 30 " " PUNCT '' _ _ _ _ SpaceAfter=No 31 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 32 kappa kappa PROPN NNP Number=Sing _ _ _ _ 33 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 " " PUNCT '' _ _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 blocking block VERB VBG VerbForm=Ger _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 translocation translocation NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 kappa kappa PROPN NNP Number=Sing _ _ _ _ 43 B b PROPN NNP Number=Sing _ _ _ _ 44 into into ADP IN _ _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 47 compartment compartment NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 2358 # text = However, the nature of the subunit involved in this mechanism has not been defined. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 nature nature NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 subunit subunit NOUN NN Number=Sing _ _ _ _ 8 involved involve ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 12 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 15 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2359 # text = To examine the mechanisms by which salicylates affect cytokine gene transcription, the amount of active and inactive NF-kappa B and NF-kappa B mRNA, in Porphyromonas gingivalis lipopolysaccharide-stimulated human monocytic cells was assessed. 1 To to PART TO _ _ _ _ _ 2 examine examine VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 salicylates salicylate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 affect affect ADJ JJ Degree=Pos _ _ _ _ 9 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 amount amount NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 active active ADJ JJ Degree=Pos _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 19 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa PROPN NNP Number=Sing _ _ _ _ 22 B b PROPN NNP Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa PROPN NNP Number=Sing _ _ _ _ 27 B b PROPN NNP Number=Sing _ _ _ _ 28 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 Porphyromonas Porphyromonas PROPN NNP Number=Sing _ _ _ _ 32 gingivalis gingivalis PROPN NNP Number=Sing _ _ _ _ 33 lipopolysaccharide-stimulated lipopolysaccharide-stimulate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 human human ADJ JJ Degree=Pos _ _ _ _ 35 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ _ 37 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 38 assessed assess VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 2360 # text = High doses of sodium salicylate suppressed NF-kappa B p65 mRNA accumulation, resulting in suppression of total NF-kappa B, p50 on tissue oligonucleotide had no effects on lipopolysaccharide-induced NF-kappa B activation. 1 High high ADJ JJ Degree=Pos _ _ _ _ 2 doses dos NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 sodium sodium NOUN NN Number=Sing _ _ _ _ 5 salicylate salicylate NOUN NN Number=Sing _ _ _ _ 6 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B b PROPN NNP Number=Sing _ _ _ _ 11 p65 p65 NUM CD NumType=Card _ _ _ _ 12 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 13 accumulation accumulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 resulting result VERB VBG VerbForm=Ger _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 suppression suppression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 total total ADJ JJ Degree=Pos _ _ _ _ 20 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappa kappa NOUN NN Number=Sing _ _ _ _ 23 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 p50 p50 NUM CD NumType=Card _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 tissue tissue NOUN NN Number=Sing _ _ _ _ 28 oligonucleotide oligonucleotide ADV RB _ _ _ _ _ 29 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 no no DET DT _ _ _ _ _ 31 effects effect NOUN NNS Number=Plur _ _ _ _ 32 on on ADP IN _ _ _ _ _ 33 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 kappa kappa NOUN NN Number=Sing _ _ _ _ 39 B b NOUN NN Number=Sing _ _ _ _ 40 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 2361 # text = The data demonstrate that the p65 subunit of NF-kappa B is inhibited by salicylate treatment and highlight the role of salicylate in the control of gene expression of inflammatory mediators. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 p65 p65 NOUN NN Number=Sing _ _ _ _ 7 subunit subunit NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 salicylate salicylate ADJ JJ Degree=Pos _ _ _ _ 17 treatment treatment NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 highlight highlight VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 role role NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 salicylate salicylate NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 control control NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 32 mediators mediator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2362 # text = Document 003003205 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003205 003003205 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2363 # text = ICSAT overexpression is not sufficient to cause adult T-cell leukemia or multiple myeloma. 1 ICSAT Icsat NOUN NN Number=Sing _ _ _ _ 2 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 cause cause VERB VB VerbForm=Inf _ _ _ _ 8 adult adult NOUN NN Number=Sing _ _ _ _ 9 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 14 myeloma myeloma NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2364 # text = ICSAT (Interferon Consensus Sequence binding protein for Activated T cells) is a lymphocyte-specific member of the interferon regulatory factor (IRF) family of transcription factors, originally identified through Southwestern screening of the ATL(Adult T-cell leukemia)-16T expression library. 1 ICSAT ICSAT PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 Interferon Interferon PROPN NNP Number=Sing _ _ _ _ 4 Consensus consensus PROPN NNP Number=Sing _ _ _ _ 5 Sequence Sequence PROPN NNP Number=Sing _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 Activated activate PROPN NNP Number=Sing _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 member member NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 interferon interferon ADJ JJ Degree=Pos _ _ _ _ 22 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 family family NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 originally originally ADV RB _ _ _ _ _ 33 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 through through ADP IN _ _ _ _ _ 35 Southwestern southwestern ADJ JJ Degree=Pos _ _ _ _ 36 screening screening NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 ATL ATL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 Adult adult PROPN NNP Number=Sing _ _ _ _ 42 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 cell cell NOUN NN Number=Sing _ _ _ _ 44 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 16T 16t ADJ JJ Degree=Pos _ _ _ _ 48 expression expression NOUN NN Number=Sing _ _ _ _ 49 library library NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 2365 # text = In this study, we created transgenic mice overexpressing ICSAT in lymphocytes. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 created create VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 8 mice mouse NOUN NNS Number=Plur _ _ _ _ 9 overexpressing overexpresse VERB VBG VerbForm=Ger _ _ _ _ 10 ICSAT Icsat PRON WP PronType=Int _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 2366 # text = Although spontaneous tumorigenesis was not observed, IL-2 production with Concanavalin A stimulation was significantly increased in transgenic mice overexpressing ICSAT. 1 Although although SCONJ IN _ _ _ _ _ 2 spontaneous spontaneous ADJ JJ Degree=Pos _ _ _ _ 3 tumorigenesis tumorigenesis NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 production production NOUN NN Number=Sing _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 Concanavalin Concanavalin PROPN NNP Number=Sing _ _ _ _ 14 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 significantly significantly ADV RB _ _ _ _ _ 18 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 21 mice mouse NOUN NNS Number=Plur _ _ _ _ 22 overexpressing overexpresse VERB VBG VerbForm=Ger _ _ _ _ 23 ICSAT ICSAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2367 # text = ICSAT overexpression in lymphocytes seems insufficient for the leukemogenesis of ATL or multiple myeloma (MM), however, it may regulate T cell activation and its overexpression may lead to leukemogenesis via controlling IL-2 production. 1 ICSAT Icsit ADJ JJ Degree=Pos _ _ _ _ 2 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 5 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 insufficient insufficient ADJ JJ Degree=Pos _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 leukemogenesis leukemogenesis NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 ATL ATL PROPN NNP Number=Sing _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 14 myeloma myeloma NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 MM mm NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 however however ADV RB _ _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 22 may may AUX MD VerbForm=Fin _ _ _ _ 23 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 29 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 30 may may AUX MD VerbForm=Fin _ _ _ _ 31 lead lead VERB VB VerbForm=Inf _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 leukemogenesis leukemogenesis DET DT Number=Sing|PronType=Dem _ _ _ _ 34 via via NOUN NN Number=Sing _ _ _ _ 35 controlling controlle VERB VBG VerbForm=Ger _ _ _ _ 36 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 2 2 NUM CD NumType=Card _ _ _ _ 39 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 2368 # text = Copyright 1999 Academic Press. 1 Copyright copyright NOUN NN Number=Sing _ _ _ _ 2 1999 1999 NUM CD NumType=Card _ _ _ _ 3 Academic academic PROPN NNP Number=Sing _ _ _ _ 4 Press. Press. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2369 # text = Document 003003208 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003208 003003208 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2370 # text = The DNA and steroid binding domains of the glucocorticoid receptor are not altered in mononuclear cells of treated CLL patients. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 steroid steroid VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 binding bind VERB VBG VerbForm=Ger _ _ _ _ 6 domains domain NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 altered alter VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 CLL Cll NOUN NN Number=Sing _ _ _ _ 20 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2371 # text = The aim of this study was to investigate whether mutations in the glucocorticoid receptor could account for the increasing unresponsiveness of patients with chronic lymphatic leukemia (CLL) to combination chemotherapy. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 aim aim NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 study study NOUN NN Number=Sing _ _ _ _ 6 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 9 whether whether SCONJ IN _ _ _ _ _ 10 mutations mutation NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 could could AUX MD VerbForm=Fin _ _ _ _ 16 account account VERB VB VerbForm=Inf _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 20 unresponsiveness unresponsiveness NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 patients patient NOUN NNS Number=Plur _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 25 lymphatic lymphatic ADJ JJ Degree=Pos _ _ _ _ 26 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 CLL CLL NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 combination combination NOUN NN Number=Sing _ _ _ _ 32 chemotherapy chemotherapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 2372 # text = The receptor was tested immunocytochemically, in steroid binding assays, and by a mutation screening (denaturing gradient gel electrophoresis) of the receptor-cDNA. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 tested test VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 immunocytochemically immunocytochemically ADV RB _ _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 steroid steroid ADJ JJ Degree=Pos _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 mutation mutation NOUN NN Number=Sing _ _ _ _ 16 screening screening NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 denaturing denatur VERB VBG VerbForm=Ger _ _ _ _ 19 gradient gradient ADJ JJ Degree=Pos _ _ _ _ 20 gel gel NOUN NN Number=Sing _ _ _ _ 21 electrophoresis electrophoresis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 receptor-cDNA receptor-cDNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2373 # text = The receptor concentration, as measured by staining and steroid binding test, varied considerably but showed no clear correlation to clinical response. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ _ 3 concentration concentration NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 as as SCONJ IN _ _ _ _ _ 6 measured measure VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 by by SCONJ IN _ _ _ _ _ 8 staining staining VERB VBG VerbForm=Ger _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 steroid steroid VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 test test NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 varied vary VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 considerably considerably ADV RB _ _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 no no DET DT _ _ _ _ _ 19 clear clear ADJ JJ Degree=Pos _ _ _ _ 20 correlation correlation NOUN NN Number=Sing _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2374 # text = Using a highly sensitive mutation screening assay of the DNA- and the steroid-binding region, none of the treated patients revealed any mutation, suggesting that the glucocorticoid receptor in the CLL patients tested is not altered in these domains. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 highly highly ADV RB _ _ _ _ _ 4 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 5 mutation mutation NOUN NN Number=Sing _ _ _ _ 6 screening screen NOUN NN Number=Sing _ _ _ _ 7 assay assay NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 steroid steroid NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 binding binde VERB VBG VerbForm=Ger _ _ _ _ 17 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 none none NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 patients patient NOUN NNS Number=Plur _ _ _ _ 24 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 any any DET DT _ _ _ _ _ 26 mutation mutation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 29 that that SCONJ IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 32 receptor receptor NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 CLL CLL PROPN NNP Number=Sing _ _ _ _ 36 patients patient NOUN NN Number=Sing _ _ _ _ 37 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 not not PART RB _ _ _ _ _ 40 altered alter VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 43 domains domains NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 2375 # text = In one individual who had not been treated before analysis a silent mutation was found in one receptor allele. 1 In in ADP IN _ _ _ _ _ 2 one one NUM CD NumType=Card _ _ _ _ 3 individual individual ADJ JJ Degree=Pos _ _ _ _ 4 who who PRON WP PronType=Rel _ _ _ _ 5 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 treated treat VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 before before ADP IN _ _ _ _ _ 10 analysis analysis NOUN NN Number=Sing _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 silent silent ADJ JJ Degree=Pos _ _ _ _ 13 mutation mutation NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 one one NUM CD NumType=Card _ _ _ _ 18 receptor receptor NOUN NN Number=Sing _ _ _ _ 19 allele allele NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2376 # text = The results suggest that mechanisms other than altered ligand or DNA binding of the receptor may be responsible for the lack of response to chemotherapy. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 6 other other ADJ JJ Degree=Pos _ _ _ _ 7 than than ADP IN _ _ _ _ _ 8 altered alter VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 ligand ligand NOUN NN Number=Sing _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 DNA dna NOUN NN Number=Sing _ _ _ _ 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 receptor receptor NOUN NN Number=Sing _ _ _ _ 16 may may AUX MD VerbForm=Fin _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 lack lack NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 chemotherapy chemotherapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2377 # text = This conclusion is discussed in relation to the mechanism of corticoid resistance in mouse and human lymphoma cells in culture. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 conclusion conclusion NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 discussed discuss VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 relation relation NOUN NN Number=Sing _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 corticoid corticoid ADJ JJ Degree=Pos _ _ _ _ 12 resistance resistance NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 mouse mouse NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 culture culture NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2378 # text = Document 003003211 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003211 003003211 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2379 # text = Block of granulocytic differentiation of 32Dcl3 cells by AML1/ETO(MTG8) but not by highly expressed Bcl-2. 1 Block block NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 4 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 32 32 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 Dcl3 Dcl3 NUM CD NumType=Card _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 AML1/ Aml1/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ETO ETO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 MTG8 MTG8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 not not ADV RB _ _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 highly highly ADV RB _ _ _ _ _ 19 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2380 # text = The chimeric gene, AML1/ETO (MTG8), generated in t(8;21) acute myeloid leukemia enhances the expression of Bcl-2. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 chimeric chimeric ADJ JJ Degree=Pos _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 AML1/ Aml1/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 6 ETO ETO PROPN NNP Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 MTG8 MTG8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 t t NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 8;21 8;21 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 acute acute NOUN NN Number=Sing _ _ _ _ 18 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 19 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 20 enhances enhance VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2381 # text = To evaluate whether this enhancement is the primary role of AML1/ETO in leukemogenesis, effects of over-expression of Bcl-2 in the murine myeloid precursor cell line, 32Dcl3, were examined. 1 To to PART TO _ _ _ _ _ 2 evaluate evaluate VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 primary primary ADJ JJ Degree=Pos _ _ _ _ 9 role role NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 AML1/ Aml1/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 12 ETO Eto PROPN NNP Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 leukemogenesis leukemogenesis PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 effects effect NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 over-expression over-expression NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 murine murine NOUN NN Number=Sing _ _ _ _ 26 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 27 precursor precursor NOUN NN Number=Sing _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 32Dcl3 32Dcl3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 2382 # text = When 32Dcl3 cells expressing exogenous Bcl-2 were induced to differentiate, the onset of morphological differentiation was delayed. 1 When when ADV WRB PronType=Int _ _ _ _ 2 32 32 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 Dcl3 Dcl3 NUM CD NumType=Card _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 expressing express VERB VBG VerbForm=Ger _ _ _ _ 6 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 7 Bcl Bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 differentiate differentiate VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 onset onset NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 morphological morphological ADJ JJ Degree=Pos _ _ _ _ 19 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 delayed delay ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2383 # text = However, even the cells expressing very high levels of exogenous Bcl-2 eventually underwent differentiation without a significant decrease in the synthesis of Bcl-2. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 even even ADV RB _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 expressing express VERB VBG VerbForm=Ger _ _ _ _ 7 very very ADV RB _ _ _ _ _ 8 high high ADJ JJ Degree=Pos _ _ _ _ 9 levels level NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 12 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 -2 -2 NUM CD NumType=Card _ _ _ _ 14 eventually eventually ADV RB _ _ _ _ _ 15 underwent underwent ADJ JJ Degree=Pos _ _ _ _ 16 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 17 without without ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 significant significant ADJ JJ Degree=Pos _ _ _ _ 20 decrease decrease NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2384 # text = On the contrary, 32Dcl3 cells stably expressing AML1/ETO were completely resistant to differentiation and continued to grow in the presence of G-CSF. 1 On on ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 contrary contrary ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 32 32 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 Dcl3 Dcl3 NUM CD NumType=Card _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 stably stably ADV RB _ _ _ _ _ 9 expressing express VERB VBG VerbForm=Ger _ _ _ _ 10 AML1/ AML1ith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 11 ETO ETO PROPN NNP Number=Sing _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 completely completely ADV RB _ _ _ _ _ 14 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 continued continue VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 grow grow VERB VB VerbForm=Inf _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 presence presence NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 G- g- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 CSF CSF NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2385 # text = These results are consistent with the interpretation that stimulation of Bcl-2 expression is not the primary target of AML1/ETO. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 interpretation interpretation NOUN NN Number=Sing _ _ _ _ 8 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 9 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 primary primary ADJ JJ Degree=Pos _ _ _ _ 19 target target NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 AML1 AML1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 / / PUNCT , _ _ _ _ SpaceAfter=No 23 ETO ETO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2386 # text = Document 003003214 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003214 003003214 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2387 # text = Cloning of murine TCF-1, a T cell-specific transcription factor interacting with functional motifs in the CD3-epsilon and T cell receptor alpha enhancers. 1 Cloning Cloning VERB VBG VerbForm=Ger _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 murine murine NOUN NN Number=Sing _ _ _ _ 4 TCF TCF NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 T T PROPN NNP Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 interacting interact VERB VBG VerbForm=Ger _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 functional functional ADJ JJ Degree=Pos _ _ _ _ 18 motifs motif NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 receptor receptor NOUN NN Number=Sing _ _ _ _ 28 alpha alpha ADP IN _ _ _ _ _ 29 enhancers enhancer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2388 # text = CD3-epsilon gene expression is confined to the T cell lineage. 1 CD3 CD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 -epsilon -epsilon NOUN NN Number=Sing _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 confined confine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 T T PROPN NNP Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 2389 # text = We have recently identified and cloned a human transcription factor, TCF-1, that binds to a functional element in the T lymphocyte-specific enhancer of CD3-epsilon. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 recently recently ADV RB _ _ _ _ _ 4 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 TCF TCF NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 functional functional ADJ JJ Degree=Pos _ _ _ _ 21 element element NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 T T PROPN NNP Number=Sing _ _ _ _ 25 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 specific specific ADJ JJ Degree=Pos _ _ _ _ 28 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 CD3 CD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 epsilon epsilon NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 2390 # text = In a panel of human cell lines, TCF-1 expression was restricted to T lineage cells. 1 In in ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 panel panel NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 TCF TCF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 restricted restrict VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 T t VERB VB VerbForm=Inf _ _ _ _ 17 lineage lineage NOUN NN Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2391 # text = TCF-1 belonged to a novel family of genes that contain the so-called high mobility group 1 (HMG) box. 1 TCF Tcf NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 belonged belong VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 novel novel NOUN NN Number=Sing _ _ _ _ 8 family family NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 so so ADV RB _ _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 high high ADJ JJ Degree=Pos _ _ _ _ 18 mobility mobility NOUN NN Number=Sing _ _ _ _ 19 group group NOUN NN Number=Sing _ _ _ _ 20 1 1 NUM CD NumType=Card _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 HMG HMG NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2392 # text = Here we report the cloning of murine TCF-1. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 cloning cloning NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 murine murine NOUN NN Number=Sing _ _ _ _ 8 TCF TCF NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 2393 # text = Two splice alternatives were identified that were not previously observed in human TCF-1. 1 Two two NUM CD NumType=Card _ _ _ _ 2 splice splice NOUN NN Number=Sing _ _ _ _ 3 alternatives alternative NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 previously previously ADV RB _ _ _ _ _ 10 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 TCF TCF NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2394 # text = Murine and human TCF-1 displayed a 95.5% overall amino acid homology. 1 Murine Murine PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 TCF TCF NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 displayed display VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 95.5 95.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 % % SYM NN Number=Sing _ _ _ _ 11 overall overall ADJ JJ Degree=Pos _ _ _ _ 12 amino amino DET DT _ _ _ _ _ 13 acid acid ADJ JJ Degree=Pos _ _ _ _ 14 homology homology NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 2395 # text = Recombinant murine and human TCF-1 recognized the same sequence motif in the CD3-epsilon enhancer as judged by gel retardation and methylation interference assays. 1 Recombinant Recombinant NOUN NN Number=Sing _ _ _ _ 2 murine murine NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 TCF TCF NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 recognized recognize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 same same ADJ JJ Degree=Pos _ _ _ _ 11 sequence sequence NOUN NN Number=Sing _ _ _ _ 12 motif motif NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 18 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 19 as as SCONJ IN _ _ _ _ _ 20 judged judge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 gel gel NOUN NN Number=Sing _ _ _ _ 23 retardation retardation NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 methylation methylation NOUN NN Number=Sing _ _ _ _ 26 interference interference NOUN NN Number=Sing _ _ _ _ 27 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2396 # text = With the murine cDNA clones several aspects of TCF-1 were analyzed. 1 With with ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 murine murine NOUN NN Number=Sing _ _ _ _ 4 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 5 clones clone NOUN NNS Number=Plur _ _ _ _ 6 several several ADJ JJ Degree=Pos _ _ _ _ 7 aspects aspect NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 TCF TCF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 2397 # text = First, deletion analysis revealed that a region of TCF-1 containing the HMG box was sufficient for sequence-specific binding. 1 First first ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 deletion deletion NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 region region NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 TCF TCF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 containing contain VERB VBG VerbForm=Ger _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 HMG HMG PROPN NNP Number=Sing _ _ _ _ 16 box box NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 specific specific ADJ JJ Degree=Pos _ _ _ _ 23 binding binding NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2398 # text = Second, by high stringency Northern blotting and in situ hybridization, TCF-1 expression was shown to be confined to the thymus and to the T cell areas of the spleen. 1 Second second ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 high high ADJ JJ Degree=Pos _ _ _ _ 5 stringency stringency NOUN NN Number=Sing _ _ _ _ 6 Northern Northern PROPN NNP Number=Sing _ _ _ _ 7 blotting blott VERB VBG VerbForm=Ger _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 situ situ NOUN NN Number=Sing _ _ _ _ 11 hybridization hybridization NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 TCF TCF NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 be be AUX VB VerbForm=Inf _ _ _ _ 21 confined confine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 thymus thymus NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 areas area NOUN NNS Number=Plur _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 spleen spleen NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2399 # text = Third, TCF-1 bound specifically to a functional T cell-specific element in the T cell receptor alpha (TCR-alpha) enhancer. 1 Third third ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 TCF TCF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 bound bound NOUN NN Number=Sing _ _ _ _ 7 specifically specifically ADV RB _ _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 functional functional ADJ JJ Degree=Pos _ _ _ _ 11 T T PROPN NNP Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 specific specific ADJ JJ Degree=Pos _ _ _ _ 15 element element NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 T T PROPN NNP Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ _ 21 alpha alpha NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 TCR Tcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2400 # text = The T lineage-specific expression and the affinity for functional motifs in the TCR-alpha and CD3-epsilon enhancers imply an important role for TCF-1 in the establishment of the mature T cell phenotype. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 T T PROPN NNP Number=Sing _ _ _ _ 3 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 affinity affinity NOUN NN Number=Sing _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 functional functional ADJ JJ Degree=Pos _ _ _ _ 12 motifs motif NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 TCR Tcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 alpha alpha NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 22 enhancers enhancer NOUN NNS Number=Plur _ _ _ _ 23 imply imply ADV RB _ _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 important important ADJ JJ Degree=Pos _ _ _ _ 26 role role NOUN NN Number=Sing _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 TCF TCF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 establishment establishment NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 mature mature ADJ JJ Degree=Pos _ _ _ _ 37 T t PROPN NNP Number=Sing _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 phenotype phenotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2401 # text = Document 003003216 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003216 003003216 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2402 # text = Constitutive expression of HIV-1 tat protein in human Jurkat T cells using a BK virus vector. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 tat tat NOUN NN Number=Sing _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 using use VERB VBG VerbForm=Ger _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 BK BK PROPN NNP Number=Sing _ _ _ _ 17 virus virus NOUN NN Number=Sing _ _ _ _ 18 vector vector NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2403 # text = The production and characterization of Jurkat cell lines that constitutively express functional human immune deficiency virus type 1 (HIV-1) tat protein, using a BK virus plasmid expression vector and HIV-1 tat cDNA, is described. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 production production NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 characterization characterization NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 lines line NOUN NNS Number=Plur _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 constitutively constitutively ADV RB _ _ _ _ _ 11 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 functional functional ADJ JJ Degree=Pos _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 immune immune NOUN NN Number=Sing _ _ _ _ 15 deficiency deficiency NOUN NN Number=Sing _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ _ 17 type type NOUN NN Number=Sing _ _ _ _ 18 1 1 NUM CD NumType=Card _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 tat tat NOUN NN Number=Sing _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 using use VERB VBG VerbForm=Ger _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 BK BK PROPN NNP Number=Sing _ _ _ _ 30 virus virus NOUN NN Number=Sing _ _ _ _ 31 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ _ 33 vector vector NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ _ 38 tat tat NOUN NN Number=Sing _ _ _ _ 39 cDNA cDNa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 42 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 2404 # text = An increased growth rate of these Jurkat-tat cell lines as compared with control cell lines was observed. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 growth growth NOUN NN Number=Sing _ _ _ _ 4 rate rate NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 tat tat NOUN NN Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 lines line NOUN NNS Number=Plur _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 control control NOUN NN Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 lines line NOUN NNS Number=Plur _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2405 # text = Document 003003220 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003220 003003220 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2406 # text = RB and a novel E2F-1 binding protein in MHC class II deficient B-cell lines and normal IFN-gamma induction of the class IL transactivator CIITA in class II non-inducible RB-defective tumor lines. 1 RB RB PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 novel novel NOUN NN Number=Sing _ _ _ _ 5 E2F E2f NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 MHC MHC PROPN NNP Number=Sing _ _ _ _ 12 class class NOUN NN Number=Sing _ _ _ _ 13 II ii NUM CD NumType=Card _ _ _ _ 14 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 lines line NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 normal normal ADJ JJ Degree=Pos _ _ _ _ 21 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 gamma gamma NOUN NN Number=Sing _ _ _ _ 24 induction induction NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 class class NOUN NN Number=Sing _ _ _ _ 28 IL Il NOUN NN Number=Sing _ _ _ _ 29 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 30 CIITA CIITa NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 class class NOUN NN Number=Sing _ _ _ _ 33 II ii NUM CD NumType=Card _ _ _ _ 34 non-inducible non-inducible ADJ JJ Degree=Pos _ _ _ _ 35 RB Rb NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 defective defective ADJ JJ Degree=Pos _ _ _ _ 38 tumor tumor NOUN NN Number=Sing _ _ _ _ 39 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2407 # text = The major histocompatibility (MHC) class II genes encode cell surface proteins that bind antigenic peptide for presentation to T-cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 major major ADJ JJ Degree=Pos _ _ _ _ 3 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 MHC MHC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 class class NOUN NN Number=Sing _ _ _ _ 8 II ii NUM CD NumType=Card _ _ _ _ 9 genes gene NOUN NNS Number=Plur _ _ _ _ 10 encode encode NOUN NN Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 surface surface NOUN NN Number=Sing _ _ _ _ 13 proteins protein NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 antigenic antigenic ADJ JJ Degree=Pos _ _ _ _ 17 peptide peptide NOUN NN Number=Sing _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 presentation presentation NOUN NN Number=Sing _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2408 # text = The class II proteins are expressed constitutively on B-cells and EBV-transformed B-cells, and are inducible by IFN-gamma on a wide variety of cell types. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 class class NOUN NN Number=Sing _ _ _ _ 3 II ii NUM CD NumType=Card _ _ _ _ 4 proteins protein NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 constitutively constitutively ADV RB _ _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 EBV haEbve PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 gamma gamma NOUN NN Number=Sing _ _ _ _ 27 on on ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 wide wide ADJ JJ Degree=Pos _ _ _ _ 30 variety variety NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2409 # text = Retinoblastoma protein (RB) is a tumor suppressor and functions as a transcriptional repressor by binding and inactivating the transactivator E2F-I. 1 Retinoblastoma Retinoblastoma NOUN NN Number=Sing _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 RB RB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 tumor tumor NOUN NN Number=Sing _ _ _ _ 9 suppressor suppressor NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 functions function NOUN NNS Number=Plur _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 15 repressor repressor NOUN NN Number=Sing _ _ _ _ 16 by by SCONJ IN _ _ _ _ _ 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 inactivating inactivat VERB VBG VerbForm=Ger _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 22 E2F E2F PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 I. I. PROPN NNP Number=Sing _ _ _ _ # sent_id = 2410 # text = RB-defective tumor lines are non-inducible for MHC class II by IFN-gamma, or very weakly inducible, but transfection of 2 different lines with RB expression vectors re-establishes or substantially enhances class II inducibility. 1 RB Rb ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 defective defective ADJ JJ Degree=Pos _ _ _ _ 4 tumor tumor NOUN NN Number=Sing _ _ _ _ 5 lines line NOUN NNS Number=Plur _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 non-inducible non-inducible ADJ JJ Degree=Pos _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 MHC MHC PROPN NNP Number=Sing _ _ _ _ 10 class class NOUN NN Number=Sing _ _ _ _ 11 II ii NUM CD NumType=Card _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 very very ADV RB _ _ _ _ _ 19 weakly weakly ADV RB _ _ _ _ _ 20 inducible inducible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 transfection transfection NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 2 2 NUM CD NumType=Card _ _ _ _ 26 different different ADJ JJ Degree=Pos _ _ _ _ 27 lines line NOUN NNS Number=Plur _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 RB RB PROPN NNP Number=Sing _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 vectors vector NOUN NNS Number=Plur _ _ _ _ 32 re re ADP IN _ _ _ _ SpaceAfter=No 33 -establishes -establish NOUN NNS Number=Plur _ _ _ _ 34 or or CCONJ CC _ _ _ _ _ 35 substantially substantially ADV RB _ _ _ _ _ 36 enhances enhance VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 class class NOUN NN Number=Sing _ _ _ _ 38 II ii NUM CD NumType=Card _ _ _ _ 39 inducibility inducibility NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 2411 # text = Therefore, we examined the RB status of a series of B-cell mutants that are defective in class II expression, generated either in vitro or derived from Bare Lymphocyte Syndrome (BLS) patients. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 RB RB PROPN NNP Number=Sing _ _ _ _ 7 status status NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 series series NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 B b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 mutants mutant NOUN NNS Number=Plur _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 defective defective ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 class class NOUN NN Number=Sing _ _ _ _ 21 II ii NUM CD NumType=Card _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 generated generate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 either either CCONJ CC _ _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 vitro vitro NOUN NN Number=Sing _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 derived derive VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 from from ADP IN _ _ _ _ _ 31 Bare bare PROPN NNP Number=Sing _ _ _ _ 32 Lymphocyte Lymphocyte PROPN NNP Number=Sing _ _ _ _ 33 Syndrome Syndrome PROPN NNP Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 BLS BLS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 2412 # text = Nuclear matrix-bound RB was detectable in all cases, indicating that loss of RB is not responsible for decreased class II expression in these lines. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 matrix matrix NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 bound bound ADJ JJ Degree=Pos _ _ _ _ 5 RB Rb NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 all all DET DT _ _ _ _ _ 10 cases case NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 13 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 14 loss loss NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 RB RB PROPN NNP Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 not not PART RB _ _ _ _ _ 19 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 class class NOUN NN Number=Sing _ _ _ _ 23 II ii NUM CD NumType=Card _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 27 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2413 # text = A second E2F-I binding protein, most likely DP-I, was also apparently normal in both class II-positive and -negative B-cell lines. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 E2F E2f NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 protein protein ADV RB _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 most most ADJ JJS Degree=Sup _ _ _ _ 10 likely likely ADJ JJ Degree=Pos _ _ _ _ 11 DP Dp NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 also also ADV RB _ _ _ _ _ 17 apparently apparently ADV RB _ _ _ _ _ 18 normal normal ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 both both DET DT _ _ _ _ _ 21 class class NOUN NN Number=Sing _ _ _ _ 22 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 positive positive ADJ JJ Degree=Pos _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 negative negative ADJ JJ Degree=Pos _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2414 # text = We also examined the IFN-gamma induction of CIITA in RB-defective lines. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 gamma gamma NOUN NN Number=Sing _ _ _ _ 8 induction induction NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 RB RB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 defective defective ADJ JJ Degree=Pos _ _ _ _ 15 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2415 # text = CIITA is a class II gene transactivator known to be defective in one form of BLS and to be required for the induction of MHC class II by IFN-gamma. 1 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 class class NOUN NN Number=Sing _ _ _ _ 5 II ii NUM CD NumType=Card _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 8 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 defective defective ADJ JJ Degree=Pos _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 one one NUM CD NumType=Card _ _ _ _ 14 form form NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 BLS BLS PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 induction induction NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 MHC MHC PROPN NNP Number=Sing _ _ _ _ 26 class class NOUN NN Number=Sing _ _ _ _ 27 II ii NUM CD NumType=Card _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 gamma gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2416 # text = CIITA mRNA is normally inducible by IFN-gamma in class II non-inducible, RB-defective lines, and in one line, re-expression of RB has no effect on CIITA mRNA induction levels. 1 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 2 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 normally normally ADV RB _ _ _ _ _ 5 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 gamma gamma NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 class class NOUN NN Number=Sing _ _ _ _ 12 II ii NUM CD NumType=Card _ _ _ _ 13 non-inducible non-inducible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 RB Rb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 defective defective ADJ JJ Degree=Pos _ _ _ _ 18 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 one one NUM CD NumType=Card _ _ _ _ 23 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 re-expression re-expression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 RB RB PROPN NNP Number=Sing _ _ _ _ 28 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 no no DET DT _ _ _ _ _ 30 effect effect NOUN NN Number=Sing _ _ _ _ 31 on on ADP IN _ _ _ _ _ 32 CIITA CIITa PROPN NNP Number=Sing _ _ _ _ 33 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 34 induction induction NOUN NN Number=Sing _ _ _ _ 35 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 2417 # text = Thus, the block in MHC class II inducibility in RB-defective cells is not due to a block in CIITA inducibility. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 block block NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 MHC MHC PROPN NNP Number=Sing _ _ _ _ 7 class class NOUN NN Number=Sing _ _ _ _ 8 II ii NUM CD NumType=Card _ _ _ _ 9 inducibility inducibility NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 RB RB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 defective defective ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 due due ADP IN _ _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 block block NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 23 inducibility inducibility NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2418 # text = Document 003003224 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003224 003003224 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2419 # text = The rhombotin family of cysteine-rich LIM-domain oncogenes: distinct members are involved in T-cell translocations to human chromosomes 11p15 and 11p13. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 rhombotin rhombotin ADJ JJ Degree=Pos _ _ _ _ 3 family family NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 cysteine cysteine NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 rich rich ADJ JJ Degree=Pos _ _ _ _ 8 LIM LIm NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 domain domain NOUN NN Number=Sing _ _ _ _ 11 oncogenes oncogene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 : : PUNCT : _ _ _ _ _ 13 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 14 members member NOUN NNS Number=Plur _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 involved involved ADJ JJ Degree=Pos _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 translocations translocation NOUN NNS Number=Plur _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 chromosomes chromosome NOUN NNS Number=Plur _ _ _ _ 24 11p15 11p15 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 11p13 11p13 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2420 # text = A chromosomal translocation in a T-cell leukemia involving the short arm of human chromosome 11 at band 11p15 disrupts the rhombotin gene. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 chromosomal chromosomal ADJ JJ Degree=Pos _ _ _ _ 3 translocation translocation NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 9 involving involve VERB VBG VerbForm=Ger _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 short short ADJ JJ Degree=Pos _ _ _ _ 12 arm arm NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 16 11 11 NUM CD NumType=Card _ _ _ _ 17 at at ADP IN _ _ _ _ _ 18 band band NOUN NN Number=Sing _ _ _ _ 19 11p15 11p15 NUM CD NumType=Card _ _ _ _ 20 disrupts disrupt NOUN NNS Number=Plur _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 rhombotin rhombotin ADJ JJ Degree=Pos _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2421 # text = This gene encodes a protein with duplicated cysteine-rich regions called LIM domains, which show homology to zinc-binding proteins and to iron-sulfur centers of ferredoxins. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 duplicated duplicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 cysteine cysteine NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 rich rich ADJ JJ Degree=Pos _ _ _ _ 11 regions region NOUN NNS Number=Plur _ _ _ _ 12 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 LIM LIm NOUN NN Number=Sing _ _ _ _ 14 domains domain NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 homology homology NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 zinc zinc NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 proteins protein NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 iron iron ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 sulfur sulfur NOUN NN Number=Sing _ _ _ _ 29 centers center NOUN NNS Number=Plur _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 ferredoxins ferredoxin NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2422 # text = Two homologues of the rhombotin gene have now been isolated. 1 Two two NUM CD NumType=Card _ _ _ _ 2 homologues homologue NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 rhombotin rhombotin ADJ JJ Degree=Pos _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 now now ADV RB _ _ _ _ _ 9 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 10 isolated isolate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 2423 # text = One of these, designated Rhom-2, is located on human chromosome 11 at band 11p13, where a cluster of T-cell leukemia-specific translocations occur; all translocation breakpoints at 11p13 are upstream of the Rhom-2 gene. 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these PRON DT Number=Plur|PronType=Dem _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 Rhom rhom PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 15 11 11 NUM CD NumType=Card _ _ _ _ 16 at at ADP IN _ _ _ _ _ 17 band band NOUN NN Number=Sing _ _ _ _ 18 11p13 11p13 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 where where ADV WRB PronType=Rel _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 cluster cluster NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 specific specific ADJ JJ Degree=Pos _ _ _ _ 29 translocations translocation NOUN NNS Number=Plur _ _ _ _ 30 occur occur NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ; ; PUNCT , _ _ _ _ _ 32 all all DET DT _ _ _ _ _ 33 translocation translocation NOUN NN Number=Sing _ _ _ _ 34 breakpoints breakpoint NOUN NNS Number=Plur _ _ _ _ 35 at at ADP IN _ _ _ _ _ 36 11p13 11p13 NUM CD NumType=Card _ _ _ _ 37 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 38 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 Rhom rhom PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 2 2 NUM CD NumType=Card _ _ _ _ 44 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 2424 # text = Human and mouse Rhom-2 are highly conserved and, like rhombotin, encode two tandem cysteine-rich LIM domains. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 mouse mouse NOUN NN Number=Sing _ _ _ _ 4 Rhom rhom NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 highly highly ADV RB _ _ _ _ _ 9 conserved conserve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 and and CCONJ CC _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 like like ADP IN _ _ _ _ _ 13 rhombotin rhombotin NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 encode encode NOUN NN Number=Sing _ _ _ _ 16 two two NUM CD NumType=Card _ _ _ _ 17 tandem tandem NOUN NN Number=Sing _ _ _ _ 18 cysteine cysteine NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 rich rich ADJ JJ Degree=Pos _ _ _ _ 21 LIM LIm NOUN NN Number=Sing _ _ _ _ 22 domains domain NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2425 # text = Rhom-2 mRNA is expressed in early mouse development in central nervous system, lung, kidney, liver, and spleen but only very low levels occur in thymus. 1 Rhom Rhom PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 early early ADJ JJ Degree=Pos _ _ _ _ 9 mouse mouse NOUN NN Number=Sing _ _ _ _ 10 development development NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 central central ADJ JJ Degree=Pos _ _ _ _ 13 nervous nervous ADJ JJ Degree=Pos _ _ _ _ 14 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 lung lung NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 kidney kidney NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 liver liver NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 spleen spleen NOUN NN Number=Sing _ _ _ _ 24 but but CCONJ CC _ _ _ _ _ 25 only only ADV RB _ _ _ _ _ 26 very very ADV RB _ _ _ _ _ 27 low low ADJ JJ Degree=Pos _ _ _ _ 28 levels level NOUN NNS Number=Plur _ _ _ _ 29 occur occur VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 thymus thymus NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2426 # text = The other gene, designated Rhom-3, is not on chromosome 11 but also retains homology to the LIM domain of rhombotin. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 other other ADJ JJ Degree=Pos _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 Rhom rhom PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 14 11 11 NUM CD NumType=Card _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 also also ADV RB _ _ _ _ _ 17 retains retain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 homology homology NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 LIM LIM PROPN NNP Number=Sing _ _ _ _ 22 domain domain NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 rhombotin rhombotin NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2427 # text = Since the Rhom-2 gene is such a common site of chromosomal damage in T-cell tumors, the consistency of translocations near the rhombotin gene was further examined. 1 Since since SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 Rhom rhom NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 such such DET PDT _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 common common ADJ JJ Degree=Pos _ _ _ _ 11 site site NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 chromosomal chromosomal ADJ JJ Degree=Pos _ _ _ _ 14 damage damage NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 tumors tumor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 consistency consistency NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 translocations translocation NOUN NNS Number=Plur _ _ _ _ 24 near near ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 rhombotin rhombotin NOUN NN Number=Sing _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 29 further further ADV RB _ _ _ _ _ 30 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2428 # text = A second translocation adjacent to rhombotin was found and at the same position as in the previous example. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 translocation translocation NOUN NN Number=Sing _ _ _ _ 4 adjacent adjacent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 rhombotin rhombotin VERB VB VerbForm=Inf _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 at at ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 same same ADJ JJ Degree=Pos _ _ _ _ 13 position position NOUN NN Number=Sing _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 previous previous ADJ JJ Degree=Pos _ _ _ _ 18 example example NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2429 # text = Therefore, chromosome bands 11p15 (rhombotin) and 11p13 (Rhom-2) are consistent sites of chromosome translocation in T-cell leukemia, with the 11p15 target more rarely involved. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 chromosome chromosome DET DT _ _ _ _ _ 4 bands band NOUN NNS Number=Plur _ _ _ _ 5 11p15 11p15 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 rhombotin rhombotin NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 11p13 11p13 NUM CD NumType=Card _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 Rhom rhom NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 18 sites site NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 chromosome chromosome DET DT _ _ _ _ _ 21 translocation translocation NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 11p15 11p15 NUM CD NumType=Card _ _ _ _ 30 target target NOUN NN Number=Sing _ _ _ _ 31 more more ADV RBR _ _ _ _ _ 32 rarely rarely ADV RB _ _ _ _ _ 33 involved involved ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2430 # text = The results define the rhombotin gene family as a class of T-cell oncogenes with duplicated cysteine-rich LIM domains. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 define define VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 rhombotin rhombotin NOUN NN Number=Sing _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 family family NOUN NN Number=Sing _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 class class NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 oncogenes oncogene NOUN NNS Number=Plur _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 duplicated duplicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 cysteine cysteine NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 rich rich ADJ JJ Degree=Pos _ _ _ _ 20 LIM LIm NOUN NN Number=Sing _ _ _ _ 21 domains domain NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2431 # text = Document 003003225 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003225 003003225 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2432 # text = Aiolos transcription factor controls cell death in T cells by regulating Bcl-2 expression and its cellular localization. 1 Aiolos Aiolos PROPN NNP Number=Sing _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 controls controls NOUN NN Number=Sing _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 death death NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 by by SCONJ IN _ _ _ _ _ 11 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 12 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 19 localization localization NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2433 # text = We searched for proteins that interact with Ras in interleukin (IL)-2-stimulated or IL-2-deprived cells, and found that the transcription factor Aiolos interacts with Ras. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 searched search VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 proteins protein NOUN NNS Number=Plur _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 interact interact VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 Ras Ras PROPN NNP Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 interleukin interleukin PROPN NNP Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 deprived deprive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 that that SCONJ IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ _ 31 factor factor NOUN NN Number=Sing _ _ _ _ 32 Aiolos Aiolos PROPN NNP Number=Sing _ _ _ _ 33 interacts interact NOUN NNS Number=Plur _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 Ras Ras PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 2434 # text = The Ras-Aiolos interaction was confirmed in vitro and in vivo by co-immunoprecipitation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Ras Ras PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 Aiolos Aiolos PROPN NNP Number=Sing _ _ _ _ 5 interaction interaction NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 confirmed confirm VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 vitro vitro NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 vivo vivo NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 co-immunoprecipitation co-immunoprecipitation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 2435 # text = Indirect immunofluorescence shows that IL-2 controls the cellular distribution of Aiolos and induces its tyrosine phosphorylation, required for dissociation from Ras. 1 Indirect Indirect ADJ JJ Degree=Pos _ _ _ _ 2 immunofluorescence immunofluorescence NOUN NN Number=Sing _ _ _ _ 3 shows show VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 controls control NOUN NNS Number=Plur _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 11 distribution distribution NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Aiolos Aiolo NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 induces induce NOUN NNS Number=Plur _ _ _ _ 16 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 17 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 tyrosine tyrosine PRON PRP _ _ _ _ _ 19 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 dissociation dissociation NOUN NN Number=Sing _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 Ras Ras PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2436 # text = We also identified functional Aiolos-binding sites in the Bcl-2 promoter, which are able to activate the luciferase reporter gene. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 functional functional ADJ JJ Degree=Pos _ _ _ _ 5 Aiolos Aiolo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 sites site NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 able able ADJ JJ Degree=Pos _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 activate activate VERB VB VerbForm=Inf _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 23 reporter reporter NOUN NN Number=Sing _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2437 # text = Mutation of Aiolos-binding sites within the Bcl-2 promoter inhibits transactivation of the reporter gene luciferase, suggesting direct control of Bcl-2 expression by Aiolos. 1 Mutation Mutation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Aiolos Aiolos PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 binding binding VERB VBG VerbForm=Ger _ _ _ _ 6 sites site NOUN NNS Number=Plur _ _ _ _ 7 within within ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 inhibits inhibits NOUN NNS Number=Plur _ _ _ _ 14 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 reporter reporter NOUN NN Number=Sing _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 luciferase luciferase NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 22 direct direct ADJ JJ Degree=Pos _ _ _ _ 23 control control NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 Aiolos Aiolos PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2438 # text = Co-transfection experiments confirm that Aiolos induces Bcl-2 expression and prevents apoptosis in IL-2-deprived cells. 1 Co co NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 transfection transfection NOUN NN Number=Sing _ _ _ _ 4 experiments experiment NOUN NNS Number=Plur _ _ _ _ 5 confirm confirm VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 Aiolos Aiolos PROPN NNP Number=Sing _ _ _ _ 8 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 prevents prevent NOUN NNS Number=Plur _ _ _ _ 15 apoptosis apoptosis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 deprived deprive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2439 # text = We propose a model for the regulation of Bcl-2 expression via Aiolos. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 model model NOUN NN Number=Sing _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 regulation regulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 via via ADP IN _ _ _ _ _ 14 Aiolos Aiolos PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2440 # text = Document 003003226 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003226 003003226 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2441 # text = Glucocorticoids promote nonphlogistic phagocytosis of apoptotic leukocytes. 1 Glucocorticoids Glucocorticoid NOUN NNS Number=Plur _ _ _ _ 2 promote promote VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 nonphlogistic nonphlogistic ADJ JJ Degree=Pos _ _ _ _ 4 phagocytosis phagocytosis NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 7 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2442 # text = Phagocyte recognition, uptake, and nonphlogistic degradation of neutrophils and other leukocytes undergoing apoptosis promote the resolution of inflammation. 1 Phagocyte Phagocyte NOUN NN Number=Sing _ _ _ _ 2 recognition recognition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 uptake uptake NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 nonphlogistic nonphlogistic ADJ JJ Degree=Pos _ _ _ _ 8 degradation degradation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 other other ADJ JJ Degree=Pos _ _ _ _ 13 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 14 undergoing undergo VERB VBG VerbForm=Ger _ _ _ _ 15 apoptosis apoptosis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 promote promote VERB VB VerbForm=Inf _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 resolution resolution NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2443 # text = This study assessed the effects of anti-inflammatory glucocorticoids on this leukocyte clearance mechanism. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 assessed assess VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 8 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 12 clearance clearance NOUN NN Number=Sing _ _ _ _ 13 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 2444 # text = Pretreatment of "semimature" 5-day human monocyte-derived macrophages (M phi) for 24 h with methylprednisolone, dexamethasone, and hydrocortisone, but not the nonglucocorticoid steroids aldosterone, estradiol, and progesterone, potentiated phagocytosis of apoptotic neutrophils. 1 Pretreatment Pretreatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 " " PUNCT `` _ _ _ _ SpaceAfter=No 4 semimature semimature NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 " " PUNCT '' _ _ _ _ _ 6 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 day day NOUN NN Number=Sing _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 M m NOUN NN Number=Sing _ _ _ _ 16 phi phi NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 24 24 NUM CD NumType=Card _ _ _ _ 20 h h NOUN NN Number=Sing _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 methylprednisolone methylprednisolone NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 hydrocortisone hydrocortisone NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 but but CCONJ CC _ _ _ _ _ 30 not not ADV RB _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 nonglucocorticoid nonglucocorticoid ADJ JJ Degree=Pos _ _ _ _ 33 steroids steroid NOUN NNS Number=Plur _ _ _ _ 34 aldosterone aldosterone NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 estradiol estradiol NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 progesterone progesterone VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 potentiated potentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 phagocytosis phagocytosis NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 45 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 2445 # text = These effects were specific in that the potentiated phagocytosis of apoptotic neutrophils was completely blocked by the glucocorticoid receptor antagonist RU38486, and glucocorticoids did not promote 5-day M phi ingestion of opsonized erythrocytes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 potentiated potentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 phagocytosis phagocytosis NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 12 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 completely completely ADV RB _ _ _ _ _ 15 blocked blocked VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 19 receptor receptor NOUN NN Number=Sing _ _ _ _ 20 antagonist antagonist NOUN NN Number=Sing _ _ _ _ 21 RU38486 Ru38486 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 25 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 not not PART RB _ _ _ _ _ 27 promote promote VERB VB VerbForm=Inf _ _ _ _ 28 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 day day NOUN NN Number=Sing _ _ _ _ 31 M m NOUN NN Number=Sing _ _ _ _ 32 phi phi NOUN NN Number=Sing _ _ _ _ 33 ingestion ingestion NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 opsonized opsonize ADJ JJ Degree=Pos _ _ _ _ 36 erythrocytes erythrocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 2446 # text = Similar glucocorticoid-mediated potentiation was observed with 5-day M phi uptake of alternative apoptotic "targets" (eosinophils and Jurkat T cells) and in uptake of apoptotic neutrophils by alternative phagocytes (human glomerular mesangial cells and murine M phi elicited into the peritoneum or derived from bone marrow). 1 Similar similar ADJ JJ Degree=Pos _ _ _ _ 2 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 -mediated -mediated ADJ JJ Degree=Pos _ _ _ _ 4 potentiation potentiation NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 day day NOUN NN Number=Sing _ _ _ _ 11 M be NOUN NN Number=Sing _ _ _ _ 12 phi phi NOUN NN Number=Sing _ _ _ _ 13 uptake uptake NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 16 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 17 " " PUNCT `` _ _ _ _ SpaceAfter=No 18 targets target NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 " " PUNCT '' _ _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 uptake uptake NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 32 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 35 phagocytes phagocyte NOUN NNS Number=Plur _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 human human AUX MD VerbForm=Fin _ _ _ _ 38 glomerular glomerular VERB VB VerbForm=Inf _ _ _ _ 39 mesangial mesangial ADJ JJ Degree=Pos _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 murine murine NOUN NN Number=Sing _ _ _ _ 43 M be NOUN NN Number=Sing _ _ _ _ 44 phi phi NOUN NN Number=Sing _ _ _ _ 45 elicited elicit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 into into ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 peritoneum peritoneum NOUN NN Number=Sing _ _ _ _ 49 or or CCONJ CC _ _ _ _ _ 50 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 51 from from ADP IN _ _ _ _ _ 52 bone bone NOUN NN Number=Sing _ _ _ _ 53 marrow marrow NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 2447 # text = Importantly, methylprednisolone-mediated enhancement of the uptake of apoptotic neutrophils did not trigger the release of the chemokines IL-8 and monocyte chemoattractant protein-1. 1 Importantly importantly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 methylprednisolone methylprednisolone VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 uptake uptake NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 12 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 13 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 trigger trigger VERB VB VerbForm=Inf _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 release release NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 chemokines chemokine NOUN NNS Number=Plur _ _ _ _ 21 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - SYM SYM _ _ _ _ SpaceAfter=No 23 8 8 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 26 chemoattractant chemoattractant NOUN NN Number=Sing _ _ _ _ 27 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2448 # text = Furthermore, longer-term potentiation by methylprednisolone was observed in maturing human monocyte-derived M phi, with greater increases in 5-day M phi uptake of apoptotic cells being observed the earlier glucocorticoids were added during monocyte maturation into M phi. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 longer longer ADJ JJR Degree=Cmp _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 term term NOUN NN Number=Sing _ _ _ _ 6 potentiation potentiation NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 methylprednisolone methylprednisolone NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in SCONJ IN _ _ _ _ _ 12 maturing mature VERB VBG VerbForm=Ger _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 M m NOUN NN Number=Sing _ _ _ _ 18 phi phi NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 greater greater ADJ JJR Degree=Cmp _ _ _ _ 22 increases increase NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 day day NOUN NN Number=Sing _ _ _ _ 27 M m NOUN NN Number=Sing _ _ _ _ 28 phi phi NOUN NN Number=Sing _ _ _ _ 29 uptake uptake NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 being be AUX VBG VerbForm=Ger _ _ _ _ 34 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 earlier earlier ADJ JJR Degree=Cmp _ _ _ _ 37 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 38 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 39 added add VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 40 during during ADP IN _ _ _ _ _ 41 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 42 maturation maturation NOUN NN Number=Sing _ _ _ _ 43 into into ADP IN _ _ _ _ _ 44 M m NOUN NN Number=Sing _ _ _ _ 45 phi phi NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 2449 # text = We conclude that potentiation of nonphlogistic clearance of apoptotic leukocytes by phagocytes is a hitherto unrecognized property of glucocorticoids that has potential implications for therapies aimed at promoting the resolution of inflammatory diseases. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 potentiation potentiation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 nonphlogistic nonphlogistic ADJ JJ Degree=Pos _ _ _ _ 7 clearance clearance NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 10 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 phagocytes phagocyte NOUN NNS Number=Plur _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 hitherto hitherto NOUN NN Number=Sing _ _ _ _ 16 unrecognized unrecognized ADJ JJ Degree=Pos _ _ _ _ 17 property property NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 potential potential ADJ JJ Degree=Pos _ _ _ _ 23 implications implication NOUN NNS Number=Plur _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 therapies therapie NOUN NNS Number=Plur _ _ _ _ 26 aimed aim VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 at at SCONJ IN _ _ _ _ _ 28 promoting promote VERB VBG VerbForm=Ger _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 resolution resolution NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 33 diseases disease NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2450 # text = Document 003003229 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003229 003003229 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2451 # text = Tumor necrosis factor receptor expression and signal transduction in HIV-1-infected cells. 1 Tumor tumor ADP IN _ _ _ _ _ 2 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 signal signal NOUN NN Number=Sing _ _ _ _ 8 transduction transduction NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2452 # text = OBJECTIVE: 1 OBJECTIVE objective NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 2453 # text = To examine the inter-relationship between HIV-1 infection and the cell surface receptors for tumor necrosis factor (TNF)-alpha, an immunoregulatory cytokine that can enhance HIV-1 replication. 1 To to PART TO _ _ _ _ _ 2 examine examine VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 inter-relationship inter-relationship NOUN NN Number=Sing _ _ _ _ 5 between between ADP IN _ _ _ _ _ 6 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 infection infection NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 surface surface NOUN NN Number=Sing _ _ _ _ 14 receptors receptor NOUN NNS Number=Plur _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 tumor tumor NOUN NN Number=Sing _ _ _ _ 17 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 alpha alpha INTJ UH _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 immunoregulatory immunoregulatory ADJ JJ Degree=Pos _ _ _ _ 27 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 28 that that PRON WDT PronType=Rel _ _ _ _ 29 can can AUX MD VerbForm=Fin _ _ _ _ 30 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 31 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 2454 # text = DESIGN: Infected promyelocytic and promonocytic cells were examined because they normally express both types of TNF receptors. 1 DESIGN Design NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 because because SCONJ IN _ _ _ _ _ 11 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 12 normally normally ADV RB _ _ _ _ _ 13 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 both both DET DT _ _ _ _ _ 15 types type NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 TNF Tnf NOUN NN Number=Sing _ _ _ _ 18 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2455 # text = METHODS: TNF receptor surface expression was determined by specific monoclonal antibody recognition and flow cytometry, and signal transduction was detected by gel shift analysis. 1 METHODS method NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 TNF Tnf ADJ JJ Degree=Pos _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ _ 5 surface surface NOUN NN Number=Sing _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 specific specific ADJ JJ Degree=Pos _ _ _ _ 11 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 12 antibody antibody ADJ JJ Degree=Pos _ _ _ _ 13 recognition recognition NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 flow flow NOUN NN Number=Sing _ _ _ _ 16 cytometry cytometry NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 signal signal ADJ JJ Degree=Pos _ _ _ _ 20 transduction transduction NOUN NN Number=Sing _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 gel gel NOUN NN Number=Sing _ _ _ _ 25 shift shift NOUN NN Number=Sing _ _ _ _ 26 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2456 # text = HIV-1 activation and expression was quantitated by reverse transcriptase assay. 1 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 quantitated quantitate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 reverse reverse NOUN NN Number=Sing _ _ _ _ 11 transcriptase transcriptase NOUN NN Number=Sing _ _ _ _ 12 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 2457 # text = RESULTS: In the OM-10.1 promyelocytic model of chronic infection, TNF-alpha-induced HIV-1 expression also resulted in a substantial increase in 75 kd TNF receptor (TR75) expression although 55 kD TNF receptor (TR55) levels were not dramatically altered. 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 In in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 OM Om NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 10.1 10.1 NUM CD NumType=Card _ _ _ _ 8 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ _ 9 model model NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 12 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 also also ADV RB _ _ _ _ _ 24 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 substantial substantial ADJ JJ Degree=Pos _ _ _ _ 28 increase increase NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 75 75 NUM CD NumType=Card _ _ _ _ 31 kd kd NOUN NN Number=Sing _ _ _ _ 32 TNF Tnf NOUN NN Number=Sing _ _ _ _ 33 receptor receptor NOUN NN Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 TR75 TR75 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 expression expression NOUN NN Number=Sing _ _ _ _ 38 although although SCONJ IN _ _ _ _ _ 39 55 55 NUM CD NumType=Card _ _ _ _ 40 kD kD PROPN NNP Number=Sing _ _ _ _ 41 TNF TNF PROPN NNP Number=Sing _ _ _ _ 42 receptor receptor NOUN NN Number=Sing _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 TR55 TR55 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ _ 46 levels level NOUN NNS Number=Plur _ _ _ _ 47 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 48 not not PART RB _ _ _ _ _ 49 dramatically dramatically ADV RB _ _ _ _ _ 50 altered alter VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 2458 # text = A series of uninfected parental HL-60 subclones all reduced TR75 surface expression in response to TNF-alpha treatment. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 series series NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 uninfected uninfected ADJ JJ Degree=Pos _ _ _ _ 5 parental parental ADJ JJ Degree=Pos _ _ _ _ 6 HL Hl NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 60 60 NUM CD NumType=Card _ _ _ _ 9 subclones subclone NOUN NNS Number=Plur _ _ _ _ 10 all all ADV RB _ _ _ _ _ 11 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 TR75 TR75 NUM CD NumType=Card _ _ _ _ 13 surface surface NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 response response NOUN NN Number=Sing _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 alpha alpha NOUN NN Number=Sing _ _ _ _ 21 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2459 # text = Enhanced TR75 expression on OM-10.1 cells followed the same TNF-alpha-dose dependency as that observed for HIV-1 production. 1 Enhanced enhance VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 TR75 TR75 NUM CD NumType=Card _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 OM OM NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 10.1 10.1 NUM CD NumType=Card _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 followed follow VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 same same ADJ JJ Degree=Pos _ _ _ _ 12 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 dose dose NOUN NN Number=Sing _ _ _ _ 17 dependency dependency NOUN NN Number=Sing _ _ _ _ 18 as as SCONJ IN _ _ _ _ _ 19 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 20 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2460 # text = An increase in TR75 expression was also evident during the peak of an acute HIV-1 infection of HL-60 promyelocytes. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 increase increase NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 TR75 TR75 NUM CD NumType=Card _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 evident evident ADJ JJ Degree=Pos _ _ _ _ 9 during during ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 peak peak NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 acute acute ADJ JJ Degree=Pos _ _ _ _ 15 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 infection infection NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 60 60 NUM CD NumType=Card _ _ _ _ 23 promyelocytes promyelocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2461 # text = Although TR55 expression was unaltered during TNF-alpha-induced HIV activation, this receptor was still involved in the viral activation process. 1 Although although SCONJ IN _ _ _ _ _ 2 TR55 TR55 NUM CD NumType=Card _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 unaltered unaltered ADJ JJ Degree=Pos _ _ _ _ 6 during during ADP IN _ _ _ _ _ 7 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 HIV Hiv NOUN NN Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 still still ADV RB _ _ _ _ _ 19 involved involved ADJ JJ Degree=Pos _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 viral viral ADJ JJ Degree=Pos _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 process process NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2462 # text = Antibody cross-linking of TR55, in the absence of exogenous TNF-alpha, induced maximal HIV-1 expression, an up-modulation of surface TR75, and nuclear NF-kappa B activity in OM-10.1 cultures. 1 Antibody Antibody NOUN NN Number=Sing _ _ _ _ 2 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 -linking -linking VERB VBG VerbForm=Ger _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 TR55 TR55 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 absence absence NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 12 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 18 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 up up ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 modulation modulation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 surface surface NOUN NN Number=Sing _ _ _ _ 29 TR75 TR75 NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 33 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 kappa kappa PROPN NNP Number=Sing _ _ _ _ 36 B b PROPN NNP Number=Sing _ _ _ _ 37 activity activity NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 OM OM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT , _ _ _ _ SpaceAfter=No 41 10.1 10.1 NUM CD NumType=Card _ _ _ _ 42 cultures culture NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 2463 # text = Surprisingly, this was the case even when an antagonistic anti-TR55 antibody was used. 1 Surprisingly surprisingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 case case NOUN NN Number=Sing _ _ _ _ 7 even even ADV RB _ _ _ _ _ 8 when when ADV WRB PronType=Int _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 antagonistic antagonistic ADJ JJ Degree=Pos _ _ _ _ 11 anti-TR55 anti-tr55 NOUN NN Number=Sing _ _ _ _ 12 antibody antibody PRON NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 2464 # text = Anti-TR55 antibody cross-linking in chronically infected U1 promonocytic cultures could only partially substitute for TNF-alpha-induced HIV-1 expression. 1 Anti anti PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -TR55 -TR55 NUM CD NumType=Card _ _ _ _ 3 antibody antibody NOUN NN Number=Sing _ _ _ _ 4 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 6 in in ADV RB _ _ _ _ _ 7 chronically chronically ADV RB _ _ _ _ _ 8 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 U1 U1 NUM CD NumType=Card _ _ _ _ 10 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 11 cultures culture NOUN NNS Number=Plur _ _ _ _ 12 could could AUX MD VerbForm=Fin _ _ _ _ 13 only only ADV RB _ _ _ _ _ 14 partially partially ADV RB _ _ _ _ _ 15 substitute substitute ADV RB _ _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2465 # text = CONCLUSIONS: 1 CONCLUSIONS conclusion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 2466 # text = Our results demonstrated that HIV-1 infection can selectively influence the surface expression of TNF receptors, potentially influencing its own expression and altering normal immunoregulatory signal transduction. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 infection infection NOUN NN Number=Sing _ _ _ _ 9 can can AUX MD VerbForm=Fin _ _ _ _ 10 selectively selectively ADV RB _ _ _ _ _ 11 influence influence VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 surface surface NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 TNF Tnf NOUN NN Number=Sing _ _ _ _ 17 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 potentially potentially ADV RB _ _ _ _ _ 20 influencing influence VERB VBG VerbForm=Ger _ _ _ _ 21 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 22 own own ADJ JJ Degree=Pos _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 altering alter VERB VBG VerbForm=Ger _ _ _ _ 26 normal normal ADJ JJ Degree=Pos _ _ _ _ 27 immunoregulatory immunoregulatory ADJ JJ Degree=Pos _ _ _ _ 28 signal signal NOUN NN Number=Sing _ _ _ _ 29 transduction transduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2467 # text = Document 003003231 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003231 003003231 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2468 # text = A chimeric type II/type I interleukin-1 receptor can mediate interleukin-1 induction of gene expression in T cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 chimeric chimeric ADJ JJ Degree=Pos _ _ _ _ 3 type type NOUN NN Number=Sing _ _ _ _ 4 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 type type NOUN NN Number=Sing _ _ _ _ 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 8 interleukin interleukin VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 can can AUX MD VerbForm=Fin _ _ _ _ 13 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 14 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 induction induction NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2469 # text = The type I interleukin-1 receptor (IL-1R) is capable of transducing a signal resulting in promoter activation in T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 type type NOUN NN Number=Sing _ _ _ _ 3 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 4 interleukin interleukin VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1R 1r PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 capable capable ADJ JJ Degree=Pos _ _ _ _ 15 of of SCONJ IN _ _ _ _ _ 16 transducing transduce VERB VBG VerbForm=Ger _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 signal signal NOUN NN Number=Sing _ _ _ _ 19 resulting result VERB VBG VerbForm=Ger _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2470 # text = This signal transduction is dependent on the cytoplasmic domain, which consists of 213 amino acids. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 signal signal NOUN NN Number=Sing _ _ _ _ 3 transduction transduction NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 9 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 consists consist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 213 213 NUM CD NumType=Card _ _ _ _ 15 amino amino DET DT _ _ _ _ _ 16 acids acid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2471 # text = In contrast to the type I receptor, the type II IL-1R has a small cytoplasmic tail, and it is not clear whether this receptor is a signal-transducing or a regulatory molecule. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 type type NOUN NN Number=Sing _ _ _ _ 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 type type NOUN NN Number=Sing _ _ _ _ 11 II ii PROPN NNP Number=Sing _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1R 1R PROPN NNP Number=Sing _ _ _ _ 15 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 small small ADJ JJ Degree=Pos _ _ _ _ 18 cytoplasmic cytoplasmic NOUN NN Number=Sing _ _ _ _ 19 tail tail NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 not not PART RB _ _ _ _ _ 25 clear clear ADJ JJ Degree=Pos _ _ _ _ 26 whether whether SCONJ IN _ _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 receptor receptor NOUN NN Number=Sing _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 transducing transducing NOUN NN Number=Sing _ _ _ _ 34 or or CCONJ CC _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 37 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 2472 # text = Here we report that the type II IL-1R does not mediate gene activation in Jurkat cells. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 type type NOUN NN Number=Sing _ _ _ _ 7 II ii NUM CD NumType=Card _ _ _ _ 8 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1R 1r NOUN NN Number=Sing _ _ _ _ 11 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 14 gene gene ADJ JJ Degree=Pos _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2473 # text = However, a hybrid receptor composed of the extracellular and transmembrane regions of the human type II interleukin-1 fused to the cytoplasmic domain of the human type I IL-1R was capable of transducing a signal across the membrane resulting in a pattern of gene activation identical to that mediated by the type I IL-1R. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 hybrid hybrid NOUN NN Number=Sing _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ _ 6 composed compose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 transmembrane transmembrane ADJ JJ Degree=Pos _ _ _ _ 12 regions region NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 type type NOUN NN Number=Sing _ _ _ _ 17 II ii NUM CD NumType=Card _ _ _ _ 18 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - SYM SYM _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 fused fuse VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 25 domain domain NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 type type NOUN NN Number=Sing _ _ _ _ 30 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 31 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 -1R -1R PROPN NNP Number=Sing _ _ _ _ 33 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 34 capable capable ADJ JJ Degree=Pos _ _ _ _ 35 of of SCONJ IN _ _ _ _ _ 36 transducing transduce VERB VBG VerbForm=Ger _ _ _ _ 37 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 signal signal NOUN NN Number=Sing _ _ _ _ 39 across across ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 membrane membrane NOUN NN Number=Sing _ _ _ _ 42 resulting result VERB VBG VerbForm=Ger _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 45 pattern pattern NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 gene gene NOUN NN Number=Sing _ _ _ _ 48 activation activation NOUN NN Number=Sing _ _ _ _ 49 identical identical ADJ JJ Degree=Pos _ _ _ _ 50 to to ADP IN _ _ _ _ _ 51 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 52 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 53 by by ADP IN _ _ _ _ _ 54 the the DET DT Definite=Def|PronType=Art _ _ _ _ 55 type type NOUN NN Number=Sing _ _ _ _ 56 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 57 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 58 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 59 1R 1R PROPN NNP Number=Sing _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 2474 # text = Our results indicated that the extracellular domain of the type II IL-1R was capable of functionally interacting with interleukin-1 and transmitting the resulting signal to a heterologous cytoplasmic domain. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 7 domain domain NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 type type NOUN NN Number=Sing _ _ _ _ 11 II ii NUM CD NumType=Card _ _ _ _ 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 R r NOUN NN Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 capable capable ADJ JJ Degree=Pos _ _ _ _ 18 of of SCONJ IN _ _ _ _ _ 19 functionally functionally ADV RB _ _ _ _ _ 20 interacting interact VERB VBG VerbForm=Ger _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 transmitting transmitt VERB VBG VerbForm=Ger _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 resulting result VERB VBG VerbForm=Ger _ _ _ _ 29 signal signal NOUN NN Number=Sing _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 33 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 34 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2475 # text = Document 003003234 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003234 003003234 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2476 # text = Evidence for normal vitamin D receptor messenger ribonucleic acid and genotype in absorptive hypercalciuria. 1 Evidence evidence NOUN NN Number=Sing _ _ _ _ 2 for for ADP IN _ _ _ _ _ 3 normal normal ADJ JJ Degree=Pos _ _ _ _ 4 vitamin vitamin NOUN NN Number=Sing _ _ _ _ 5 D would NOUN NN Number=Sing _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 messenger messenger ADV RBR _ _ _ _ _ 8 ribonucleic ribonucleic ADJ JJ Degree=Pos _ _ _ _ 9 acid acid NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 genotype genotype NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 absorptive absorptive ADJ JJ Degree=Pos _ _ _ _ 14 hypercalciuria hypercalciurion NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2477 # text = Absorptive hypercalciuria (a stone-forming condition) is characterized by gut hyperabsorption of calcium, hypercalciuria, and reduced bone density. 1 Absorptive Absorptive ADJ JJ Degree=Pos _ _ _ _ 2 hypercalciuria hypercalciuria NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 stone stone NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 forming forming VERB VBG VerbForm=Ger _ _ _ _ 8 condition condition NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 characterized characterize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 gut gut NOUN NN Number=Sing _ _ _ _ 14 hyperabsorption hyperabsorption NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 hypercalciuria hypercalciuria NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 bone bone NOUN NN Number=Sing _ _ _ _ 23 density density NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2478 # text = Inasmuch as these features implicate enhanced calcitriol action in gut and bone, we analyzed the vitamin D receptor (VDR) gene to ascertain whether an abnormality of this gene marks patients with intestinal hyperabsorption of calcium. 1 Inasmuch Inasmuch ADV RB _ _ _ _ _ 2 as as SCONJ IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 features feature NOUN NNS Number=Plur _ _ _ _ 5 implicate implicate VERB VB VerbForm=Inf _ _ _ _ 6 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 calcitriol calcitriol NOUN NN Number=Sing _ _ _ _ 8 action action NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 gut gut NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 bone bone NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 15 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 vitamin vitamin NOUN NN Number=Sing _ _ _ _ 18 D d NOUN NN Number=Sing _ _ _ _ 19 receptor receptor NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 VDR VDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 ascertain ascertain VERB VB VerbForm=Inf _ _ _ _ 26 whether whether SCONJ IN _ _ _ _ _ 27 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 abnormality abnormality NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ _ 32 marks mark VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 patients patient NOUN NNS Number=Plur _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 intestinal intestinal ADJ JJ Degree=Pos _ _ _ _ 36 hyperabsorption hyperabsorption NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 2479 # text = We have compared the frequency of a restriction fragment length polymorphism (Bsm I) associated with different alleles of the VDR gene in a group of 33 well characterized absorptive hypercalciuric patients and a group of 36 normal race- and age-matched control subjects. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 frequency frequency NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 restriction restriction NOUN NN Number=Sing _ _ _ _ 9 fragment fragment NOUN NN Number=Sing _ _ _ _ 10 length length NOUN NN Number=Sing _ _ _ _ 11 polymorphism polymorphism NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 Bsm Bsm PROPN NNP Number=Sing _ _ _ _ 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 different different ADJ JJ Degree=Pos _ _ _ _ 19 alleles allele NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 VDR VDR PROPN NNP Number=Sing _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 group group NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 33 33 NUM CD NumType=Card _ _ _ _ 29 well well ADV RB Degree=Pos _ _ _ _ 30 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 absorptive absorptive ADJ JJ Degree=Pos _ _ _ _ 32 hypercalciuric hypercalciuric ADJ JJ Degree=Pos _ _ _ _ 33 patients patient NOUN NNS Number=Plur _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 group group NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 36 36 NUM CD NumType=Card _ _ _ _ 39 normal normal ADJ JJ Degree=Pos _ _ _ _ 40 race race NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT , _ _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 age age NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 matched match VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 control control NOUN NN Number=Sing _ _ _ _ 47 subjects subject NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 2480 # text = There was no difference between the distribution of the VDR alleles in the patient population when compared with the normal population. 1 There there PRON EX _ _ _ _ _ 2 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 no no DET DT _ _ _ _ _ 4 difference difference NOUN NN Number=Sing _ _ _ _ 5 between between ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 distribution distribution NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 VDR Vdr ADJ JJR Degree=Cmp _ _ _ _ 11 alleles allele NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 patient patient ADJ JJ Degree=Pos _ _ _ _ 15 population population NOUN NN Number=Sing _ _ _ _ 16 when when ADV WRB PronType=Int _ _ _ _ 17 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 normal normal ADJ JJ Degree=Pos _ _ _ _ 21 population population NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2481 # text = The coding region of VDR messenger RNA was also normal, as determined by both DNA sequence analysis and chemical mismatch cleavage analysis of copy DNA from 11 index absorptive hypercalciuric patients. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 coding coding NOUN NN Number=Sing _ _ _ _ 3 region region NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 VDR VDR PROPN NNP Number=Sing _ _ _ _ 6 messenger messenger PROPN NNP Number=Sing _ _ _ _ 7 RNA RNA PROPN NNP Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 also also ADV RB _ _ _ _ _ 10 normal normal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 as as SCONJ IN _ _ _ _ _ 13 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 both both DET DT _ _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ _ 17 sequence sequence NOUN NN Number=Sing _ _ _ _ 18 analysis analysis NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 chemical chemical ADJ JJ Degree=Pos _ _ _ _ 21 mismatch mismatch NOUN NN Number=Sing _ _ _ _ 22 cleavage cleavage NOUN NN Number=Sing _ _ _ _ 23 analysis analysis NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 copy copy NOUN NN Number=Sing _ _ _ _ 26 DNA dna NOUN NN Number=Sing _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 11 11 NUM CD NumType=Card _ _ _ _ 29 index index NOUN NN Number=Sing _ _ _ _ 30 absorptive absorptive ADJ JJ Degree=Pos _ _ _ _ 31 hypercalciuric hypercalciuric ADJ JJ Degree=Pos _ _ _ _ 32 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 2482 # text = On the basis of these results, we propose that the enhanced intestinal calcium absorption invariably seen in absorptive hypercalciuria and attendant symptoms of this disorder are not attributable to mutations of the VDR and are not linked to a common VDR genotype. 1 On on ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 basis basis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 results result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 9 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 intestinal intestinal ADJ JJ Degree=Pos _ _ _ _ 14 calcium calcium NOUN NN Number=Sing _ _ _ _ 15 absorption absorption NOUN NN Number=Sing _ _ _ _ 16 invariably invariably ADV RB _ _ _ _ _ 17 seen see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 absorptive absorptive ADJ JJ Degree=Pos _ _ _ _ 20 hypercalciuria hypercalciurion NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 attendant attendant ADJ JJ Degree=Pos _ _ _ _ 23 symptoms symptom NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 26 disorder disorder NOUN NN Number=Sing _ _ _ _ 27 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 not not PART RB _ _ _ _ _ 29 attributable attributable ADJ JJ Degree=Pos _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 mutations mutation NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 VDR VDR PROPN NNP Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 37 not not PART RB _ _ _ _ _ 38 linked link VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 to to ADP IN _ _ _ _ _ 40 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 41 common common ADJ JJ Degree=Pos _ _ _ _ 42 VDR Vdr NOUN NN Number=Sing _ _ _ _ 43 genotype genotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2483 # text = Document 003003239 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003239 003003239 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2484 # text = Abnormalities of cyclic adenosine monophosphate signaling in platelets from untreated patients with bipolar disorder. 1 Abnormalities Abnormality NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cyclic cyclic ADJ JJ Degree=Pos _ _ _ _ 4 adenosine adenosine NOUN NN Number=Sing _ _ _ _ 5 monophosphate monophosphate NOUN NN Number=Sing _ _ _ _ 6 signaling signale VERB VBG VerbForm=Ger _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 platelets platelet NOUN NNS Number=Plur _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 untreated untreated ADJ JJ Degree=Pos _ _ _ _ 11 patients patient NOUN NNS Number=Plur _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 bipolar bipolar ADJ JJ Degree=Pos _ _ _ _ 14 disorder disorder NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2485 # text = BACKGROUND: Abnormalities in the cyclic adenosine monophosphate (cAMP)-dependent phosphorylation system have been recently reported in patients with bipolar disorder. 1 BACKGROUND background NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Abnormalities Abnormality NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 cyclic cyclic ADJ JJ Degree=Pos _ _ _ _ 7 adenosine adenosine NOUN NN Number=Sing _ _ _ _ 8 monophosphate monophosphate NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 - - PUNCT : _ _ _ _ SpaceAfter=No 13 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 14 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 15 system system NOUN NN Number=Sing _ _ _ _ 16 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 18 recently recently ADV RB _ _ _ _ _ 19 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 patients patient NOUN NN Number=Sing _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 bipolar bipolar ADJ JJ Degree=Pos _ _ _ _ 24 disorder disorder NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2486 # text = We evaluated the immunoreactivity of the regulatory and catalytic subunits of cAMP-dependent protein kinase (protein kinase A) and 1 of its substrates, Rap1, in platelets from untreated euthymic, manic, and depressed patients with bipolar disorder and healthy subjects. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 evaluated evaluate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 immunoreactivity immunoreactivity NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 catalytic catalytic ADJ JJ Degree=Pos _ _ _ _ 10 subunits subunit NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 cAMP camp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 kinase kinase NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 kinase kinase NOUN NN Number=Sing _ _ _ _ 20 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 1 1 NUM CD NumType=Card _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 26 substrates substrate NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 Rap1 Rap1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 platelets platelet NOUN NNS Number=Plur _ _ _ _ 32 from from ADP IN _ _ _ _ _ 33 untreated untreated ADJ JJ Degree=Pos _ _ _ _ 34 euthymic euthymic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 manic manic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 depressed depress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 patients patient NOUN NNS Number=Plur _ _ _ _ 41 with with ADP IN _ _ _ _ _ 42 bipolar bipolar ADJ JJ Degree=Pos _ _ _ _ 43 disorder disorder NOUN NN Number=Sing _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 46 subjects subjects NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 2487 # text = METHODS: Platelets were collected from 112 drug-free patients with bipolar disorder (52 euthymic, 29 depressed, and 31 manic) and 62 healthy subjects. 1 METHODS method NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Platelets Platelet NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 collected collect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 112 112 NUM CD NumType=Card _ _ _ _ 8 drug drug NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 free free ADJ JJ Degree=Pos _ _ _ _ 11 patients patient NOUN NN Number=Sing _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 bipolar bipolar ADJ JJ Degree=Pos _ _ _ _ 14 disorder disorder NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 52 52 NUM CD NumType=Card _ _ _ _ 17 euthymic euthymic NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 29 29 NUM CD NumType=Card _ _ _ _ 20 depressed depressed VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 31 31 NUM CD NumType=Card _ _ _ _ 24 manic manic NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 62 62 NUM CD NumType=Card _ _ _ _ 28 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 29 subjects subjects NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2488 # text = The levels of cAMP-dependent protein kinase and Rap1 were assessed by Western blot analysis, immunostaining, and computer-assisted imaging. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 cAMP camp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 kinase kinase NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 Rap1 rap1 PROPN NNP Number=Sing _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 assessed assess VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 Western western ADJ JJ Degree=Pos _ _ _ _ 15 blot blot NOUN NN Number=Sing _ _ _ _ 16 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 immunostaining immunostain VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 computer computer NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 assisted assist VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 imaging imaging NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2489 # text = RESULTS: The immunolabeling of the catalytic subunit of cAMP-dependent protein kinase was significantly different among groups (P<.001), with higher values in untreated depressed and manic patients with bipolar disorder compared with untreated euthymic patients with bipolar disorder and healthy subjects. 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 The the DET DT Definite=Def|PronType=Art _ _ _ _ 4 immunolabeling immunolabeling NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 catalytic catalytic ADJ JJ Degree=Pos _ _ _ _ 8 subunit subunit NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 cAMP camp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 kinase kinase NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 significantly significantly ADV RB _ _ _ _ _ 17 different different ADJ JJ Degree=Pos _ _ _ _ 18 among among ADP IN _ _ _ _ _ 19 groups group NOUN NNS Number=Plur _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 P p NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 < < PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 .001 .001 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 higher higher ADJ JJR Degree=Cmp _ _ _ _ 28 values value NOUN NNS Number=Plur _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 untreated untreated ADJ JJ Degree=Pos _ _ _ _ 31 depressed depressed ADJ JJ Degree=Pos _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 manic manic ADJ JJ Degree=Pos _ _ _ _ 34 patients patient NOUN NNS Number=Plur _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 bipolar bipolar ADJ JJ Degree=Pos _ _ _ _ 37 disorder disorder NOUN NN Number=Sing _ _ _ _ 38 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 with with ADP IN _ _ _ _ _ 40 untreated untreated ADJ JJ Degree=Pos _ _ _ _ 41 euthymic euthymic ADJ JJ Degree=Pos _ _ _ _ 42 patients patient NOUN NNS Number=Plur _ _ _ _ 43 with with ADP IN _ _ _ _ _ 44 bipolar bipolar ADJ JJ Degree=Pos _ _ _ _ 45 disorder disorder NOUN NN Number=Sing _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 48 subjects subjects NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 2490 # text = No significant differences were found in the immunolabeling of the regulatory subunits (type I and type II) of cAMP-dependent protein kinase. 1 No no DET DT _ _ _ _ _ 2 significant significant ADJ JJ Degree=Pos _ _ _ _ 3 differences difference NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 immunolabeling immunolabeling NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 12 subunits subunit NOUN NNS Number=Plur _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 type type INTJ UH _ _ _ _ _ 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 type type VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 II ii X LS _ _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 cAMP camp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 24 protein protein NOUN NN Number=Sing _ _ _ _ 25 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2491 # text = The immunolabeling of Rap1 was significantly higher (P<.001) in untreated euthymic, depressed, and manic patients than in healthy persons. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 immunolabeling immunolabeling NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Rap1 Rap1 PROPN NNP Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 significantly significantly ADV RB _ _ _ _ _ 7 higher higher ADJ JJR Degree=Cmp _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 P p NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 < < PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 .001 .001 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 untreated untreated ADJ JJ Degree=Pos _ _ _ _ 15 euthymic euthymic NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 depressed depress VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 manic manic ADJ JJ Degree=Pos _ _ _ _ 21 patients patient NOUN NNS Number=Plur _ _ _ _ 22 than than ADP IN _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 25 persons person NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2492 # text = CONCLUSIONS: Levels of Rap1 and the catalytic subunit of cAMP-dependent protein kinase are altered in the platelets of bipolar patients. 1 CONCLUSIONS conclusion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Levels level NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Rap1 Rap1 PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 catalytic catalytic ADJ JJ Degree=Pos _ _ _ _ 9 subunit subunit NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 cAMP camp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 kinase kinase NOUN NN Number=Sing _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 altered alter VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 platelets platelet NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 bipolar bipolar ADJ JJ Degree=Pos _ _ _ _ 23 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2493 # text = These findings may provide clues toward understanding the involvement of cAMP signaling in the pathogenesis of bipolar disorder. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 may may AUX MD VerbForm=Fin _ _ _ _ 4 provide provide VERB VB VerbForm=Inf _ _ _ _ 5 clues clue NOUN NNS Number=Plur _ _ _ _ 6 toward toward SCONJ IN _ _ _ _ _ 7 understanding understande VERB VBG VerbForm=Ger _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 involvement involvement NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 cAMP camp NOUN NN Number=Sing _ _ _ _ 12 signaling signal NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 bipolar bipolar ADJ JJ Degree=Pos _ _ _ _ 18 disorder disorder NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2494 # text = Document 003003242 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003242 003003242 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2495 # text = Phorbol ester-induced mononuclear cell differentiation is blocked by the mitogen-activated protein kinase kinase (MEK) inhibitor PD98059. 1 Phorbol Phorbol NOUN NN Number=Sing _ _ _ _ 2 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 mononuclear mononuclear NOUN NN Number=Sing _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 mitogen mitogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 kinase kinase NOUN NN Number=Sing _ _ _ _ 17 kinase kinase NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 MEK MEK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 22 PD98059 Pd98059 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2496 # text = The purpose of this study was to evaluate whether the mitogen-activated protein kinase (MAPK) signaling pathway contributes to 12-O-tetradecanoylphorbol-13-acetate (TPA)-induced mononuclear differentiation in the human myeloblastic leukemia ML-1 cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 purpose purpose NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 study study NOUN NN Number=Sing _ _ _ _ 6 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 evaluate evaluate VERB VB VerbForm=Inf _ _ _ _ 9 whether whether SCONJ IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 mitogen mitogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 kinase kinase NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 MAPK MAPK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 signaling signaling NOUN NN Number=Sing _ _ _ _ 20 pathway pathway NOUN NN Number=Sing _ _ _ _ 21 contributes contribute VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 12- 12- PUNCT , _ _ _ _ SpaceAfter=No 24 O o INTJ UH _ _ _ _ SpaceAfter=No 25 -tetradecanoylphorbol -tetradecanoylphorbol INTJ UH _ _ _ _ SpaceAfter=No 26 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 -acetate -acetate NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 mononuclear mononuclear NOUN NN Number=Sing _ _ _ _ 34 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 human human ADJ JJ Degree=Pos _ _ _ _ 38 myeloblastic myeloblastic ADJ JJ Degree=Pos _ _ _ _ 39 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 40 ML Ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT , _ _ _ _ SpaceAfter=No 42 1 1 NUM CD NumType=Card _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 2497 # text = Upon TPA treatment, the activity of ERK1 and ERK2 rapidly increased, with maximal induction between 1 and 3 h, while ERK2 protein levels remained constant. 1 Upon upon ADP IN _ _ _ _ _ 2 TPA TPa DET DT Definite=Ind|PronType=Art _ _ _ _ 3 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 ERK1 ERK1 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 ERK2 ERK2 NUM CD NumType=Card _ _ _ _ 11 rapidly rapidly ADV RB _ _ _ _ _ 12 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 between between ADP IN _ _ _ _ _ 18 1 1 NUM CD NumType=Card _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 3 3 NUM CD NumType=Card _ _ _ _ 21 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 while while SCONJ IN _ _ _ _ _ 24 ERK2 ERK2 NUM CD NumType=Card _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ _ 26 levels level NOUN NNS Number=Plur _ _ _ _ 27 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 constant constant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2498 # text = The activity of JNK1 was also significantly induced, with JNK1 protein levels increasing moderately during exposure to TPA. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activity activity NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 JNK1 JNK1 PROPN NNP Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 significantly significantly ADV RB _ _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 JNK1 JNK1 PROPN NNP Number=Sing _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 levels level NOUN NNS Number=Plur _ _ _ _ 14 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 15 moderately moderately ADV RB _ _ _ _ _ 16 during during ADP IN _ _ _ _ _ 17 exposure exposure NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2499 # text = Treatment of cells with PD98059, a specific inhibitor of mitogen-activated protein kinase kinase (MEK), inhibited TPA-induced ERK2 activity. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 PD98059 PD98059 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 mitogen mitogen NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT : _ _ _ _ SpaceAfter=No 13 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 kinase kinase NOUN NN Number=Sing _ _ _ _ 16 kinase kinase NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 MEK MEK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 TPA TPa NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 ERK2 Erk2 NUM CD NumType=Card _ _ _ _ 26 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2500 # text = Furthermore, PD98059 completely blocked the TPA-induced differentiation of ML-1 cells, as assessed by a number of features associated with mononuclear differentiation including changes in morphology, nonspecific esterase activity, phagocytic ability, NADPH oxidase activity, mitochondrial respiration, and c-jun mRNA inducibility. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 PD98059 PD98059 PROPN NNP Number=Sing _ _ _ _ 4 completely completely ADV RB _ _ _ _ _ 5 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 TPA TPa NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 ML ML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 as as SCONJ IN _ _ _ _ _ 18 assessed assess VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 number number NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 features feature NOUN NNS Number=Plur _ _ _ _ 24 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 mononuclear mononuclear NOUN NN Number=Sing _ _ _ _ 27 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 28 including include VERB VBG VerbForm=Ger _ _ _ _ 29 changes change NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 morphology morphology NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 nonspecific nonspecific ADJ JJ Degree=Pos _ _ _ _ 34 esterase esterase NOUN NN Number=Sing _ _ _ _ 35 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 phagocytic phagocytic ADJ JJ Degree=Pos _ _ _ _ 38 ability ability NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 NADPH NADPH DET DT _ _ _ _ _ 41 oxidase oxidase ADJ JJ Degree=Pos _ _ _ _ 42 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 mitochondrial mitochondrial ADJ JJ Degree=Pos _ _ _ _ 45 respiration respiration NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 c- c- SYM NFP _ _ _ _ SpaceAfter=No 49 jun jun NOUN NN Number=Sing _ _ _ _ 50 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 51 inducibility inducibility NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 2501 # text = We conclude that activation of the MEK/ERK signaling pathway is necessary for TPA-induced mononuclear cell differentiation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 MEK MEK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 ERK ERK PROPN NNP Number=Sing _ _ _ _ 10 signaling signaling NOUN NN Number=Sing _ _ _ _ 11 pathway pathway NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 mononuclear mononuclear NOUN NN Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2502 # text = Document 003003247 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003247 003003247 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2503 # text = Estrogen and progesterone induction of survival of monoblastoid cells undergoing TNF-alpha-induced apoptosis. 1 Estrogen Estrogen PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 progesterone progesterone ADJ JJ Degree=Pos _ _ _ _ 4 induction induction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 survival survival NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 monoblastoid monoblastoid ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 undergoing undergo VERB VBG VerbForm=Ger _ _ _ _ 11 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2504 # text = Induction of apoptosis of mononucleated cells is a physiological process for regulating the intensity of the immune response. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 mononucleated mononucleate ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 physiological physiological ADJ JJ Degree=Pos _ _ _ _ 10 process process NOUN NN Number=Sing _ _ _ _ 11 for for SCONJ IN _ _ _ _ _ 12 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 intensity intensity NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 immune immune ADJ JJ Degree=Pos _ _ _ _ 18 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2505 # text = The female steroid hormones estrogen (E2) and progesterone (Prog) are known to modulate the reactivity of the immune system; recently it has been demonstrated that they can regulate induction of apoptosis of endothelial cells and osteoblasts. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 female female ADJ JJ Degree=Pos _ _ _ _ 3 steroid steroid NOUN NN Number=Sing _ _ _ _ 4 hormones hormone NOUN NNS Number=Plur _ _ _ _ 5 estrogen estrogen NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 E2 e2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 progesterone progesterone NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 Prog Prog PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 reactivity reactivity NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 immune immune ADJ JJ Degree=Pos _ _ _ _ 23 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ; ; PUNCT , _ _ _ _ _ 25 recently recently ADV RB _ _ _ _ _ 26 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 27 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 29 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 that that SCONJ IN _ _ _ _ _ 31 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 32 can can AUX MD VerbForm=Fin _ _ _ _ 33 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 34 induction induction NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 osteoblasts osteoblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 2506 # text = TNF-alpha-mediated induction of apoptosis has been well characterized in myeloid cells. 1 TNF Tnf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 alpha- alpha- PUNCT : _ _ _ _ SpaceAfter=No 4 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 induction induction NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 8 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 10 well well ADV RB Degree=Pos _ _ _ _ 11 characterized characterize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 2507 # text = We investigated whether E2 and Prog could interfere with TNF-alpha-induced apoptosis of the monoblastoid U937 cell line. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 E2 E2 NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 Prog Prog NOUN NN Number=Sing _ _ _ _ 7 could could AUX MD VerbForm=Fin _ _ _ _ 8 interfere interfere VERB VB VerbForm=Inf _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 monoblastoid monoblastoid NOUN NN Number=Sing _ _ _ _ 19 U937 U937 NUM CD NumType=Card _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2508 # text = Treatment with E2 or Prog increased survival and prevented apoptosis induced by TNF-alpha in both undifferentiated and macrophage-like PMA-differentiated U937 cells, as assessed by trypan blue exclusion cell counting, thymidine incorporation, AnnexinV labeling, followed by flow cytometry and DNA fragmentation studies. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 E2 E2 NUM CD NumType=Card _ _ _ _ 4 or or CCONJ CC _ _ _ _ _ 5 Prog Prog PROPN NNP Number=Sing _ _ _ _ 6 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 survival survival NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 apoptosis apoptosis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 alpha alpha NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 both both CCONJ CC _ _ _ _ _ 18 undifferentiated undifferentiated ADJ JJ Degree=Pos _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 macrophage macrophage ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 like like ADP IN _ _ _ _ _ 23 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 U937 U937 NOUN NN Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 as as SCONJ IN _ _ _ _ _ 30 assessed assess VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 trypan trypan ADJ JJ Degree=Pos _ _ _ _ 33 blue blue ADJ JJ Degree=Pos _ _ _ _ 34 exclusion exclusion NOUN NN Number=Sing _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ _ 36 counting counting NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 thymidine thymidine NOUN NN Number=Sing _ _ _ _ 39 incorporation incorporation NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 AnnexinV AnnexinV PROPN NNP Number=Sing _ _ _ _ 42 labeling labeling NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 by by ADP IN _ _ _ _ _ 46 flow flow NOUN NN Number=Sing _ _ _ _ 47 cytometry cytometry NOUN NN Number=Sing _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 DNA dna NOUN NN Number=Sing _ _ _ _ 50 fragmentation fragmentation NOUN NN Number=Sing _ _ _ _ 51 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 2509 # text = This effect can be associated with the activation of specific hormone receptors, since we observed the expression of the estrogen receptor alpha (ER-alpha), ER-beta, and progesterone receptor (PR) mRNAs; the ER-alpha protein expression was confirmed by immunocytochemical analysis. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 can can AUX MD VerbForm=Fin _ _ _ _ 4 be be AUX VB VerbForm=Inf _ _ _ _ 5 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 specific specific ADJ JJ Degree=Pos _ _ _ _ 11 hormone hormone NOUN NN Number=Sing _ _ _ _ 12 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 since since SCONJ IN _ _ _ _ _ 15 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 16 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 estrogen estrogen ADJ JJ Degree=Pos _ _ _ _ 22 receptor receptor NOUN NN Number=Sing _ _ _ _ 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 ER er NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 ER er NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 progesterone progesterone VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 receptor receptor NOUN NN Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 PR pr NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 mRNAs mRNAs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 ; ; PUNCT , _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 ER- ER- X AFX _ _ _ _ SpaceAfter=No 44 alpha alpha X FW Foreign=Yes _ _ _ _ 45 protein protein NOUN NN Number=Sing _ _ _ _ 46 expression expression NOUN NN Number=Sing _ _ _ _ 47 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 48 confirmed confirm VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 49 by by ADP IN _ _ _ _ _ 50 immunocytochemical immunocytochemical ADJ JJ Degree=Pos _ _ _ _ 51 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 2510 # text = In addition, hormone-mediated survival against apoptosis was concentration dependent, reaching the half-maximal effect at 10 nM and blocked by the ER antagonist ICI 182,780 in undifferentiated cells, further supporting a receptor-mediated mechanism of cell survival. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 hormone hormone NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 survival survival NOUN NN Number=Sing _ _ _ _ 8 against against ADP IN _ _ _ _ _ 9 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 concentration concentration NOUN NN Number=Sing _ _ _ _ 12 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 reaching reach VERB VBG VerbForm=Ger _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 half half NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 19 effect effect NOUN NN Number=Sing _ _ _ _ 20 at at ADP IN _ _ _ _ _ 21 10 10 NUM CD NumType=Card _ _ _ _ 22 nM nm NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 ER er NOUN NN Number=Sing _ _ _ _ 28 antagonist antagonist NOUN NN Number=Sing _ _ _ _ 29 ICI ICI PROPN NNP Number=Sing _ _ _ _ 30 182,780 182,780 NUM CD NumType=Card _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 undifferentiated undifferentiated ADJ JJ Degree=Pos _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 further further ADV RB _ _ _ _ _ 36 supporting support VERB VBG VerbForm=Ger _ _ _ _ 37 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 cell cell NOUN NN Number=Sing _ _ _ _ 44 survival survival NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 2511 # text = Other steroid receptor drugs such as Raloxifene, RU486, or the ICI 182,780 in PMA-differentiated cells displayed agonist activity by preventing TNF-alpha-induced apoptosis as efficiently as the hormones alone, providing further evidence to the notion that steroid receptor drugs may manifest agonist or antagonist activities depending on the cellular context in which they are studied. 1 Other other ADJ JJ Degree=Pos _ _ _ _ 2 steroid steroid ADJ JJ Degree=Pos _ _ _ _ 3 receptor receptor NOUN NN Number=Sing _ _ _ _ 4 drugs drug NOUN NNS Number=Plur _ _ _ _ 5 such such ADJ JJ Degree=Pos _ _ _ _ 6 as as ADP IN _ _ _ _ _ 7 Raloxifene Raloxifene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 RU486 RU486 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 ICI ICI PROPN NNP Number=Sing _ _ _ _ 14 182,780 182,780 NUM CD NumType=Card _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 displayed display VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 agonist agonist ADJ JJ Degree=Pos _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 by by SCONJ IN _ _ _ _ _ 24 preventing prevent VERB VBG VerbForm=Ger _ _ _ _ 25 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 31 as as SCONJ IN _ _ _ _ _ 32 efficiently efficiently ADV RB _ _ _ _ _ 33 as as ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 hormones hormone NOUN NNS Number=Plur _ _ _ _ 36 alone alone ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 providing provide VERB VBG VerbForm=Ger _ _ _ _ 39 further further ADJ JJ Degree=Pos _ _ _ _ 40 evidence evidence NOUN NN Number=Sing _ _ _ _ 41 to to ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 notion notion NOUN NN Number=Sing _ _ _ _ 44 that that PRON WDT PronType=Rel _ _ _ _ 45 steroid steroid VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 46 receptor receptor NOUN NN Number=Sing _ _ _ _ 47 drugs drug NOUN NNS Number=Plur _ _ _ _ 48 may may AUX MD VerbForm=Fin _ _ _ _ 49 manifest manifest VERB VB VerbForm=Inf _ _ _ _ 50 agonist agonist ADJ JJ Degree=Pos _ _ _ _ 51 or or CCONJ CC _ _ _ _ _ 52 antagonist antagonist ADJ JJ Degree=Pos _ _ _ _ 53 activities activity NOUN NNS Number=Plur _ _ _ _ 54 depending depend VERB VBG VerbForm=Ger _ _ _ _ 55 on on ADP IN _ _ _ _ _ 56 the the DET DT Definite=Def|PronType=Art _ _ _ _ 57 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 58 context context NOUN NN Number=Sing _ _ _ _ 59 in in ADP IN _ _ _ _ _ 60 which which PRON WDT PronType=Rel _ _ _ _ 61 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 62 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 63 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 64 . . PUNCT . _ _ _ _ _ # sent_id = 2512 # text = Treatment with E2 was also associated with a time-dependent decrease in the mRNA level of the proapoptotic Nip-2 protein, supporting the hypothesis that hormone responsiveness of U937 cells is mediated by target gene transcription. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 E2 e2 NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 decrease decrease NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 16 level level NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 proapoptotic proapoptotic ADJ JJ Degree=Pos _ _ _ _ 20 Nip Nip NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 supporting support VERB VBG VerbForm=Ger _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 28 that that PRON WDT PronType=Rel _ _ _ _ 29 hormone hormone VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 U937 U937 NUM CD NumType=Card _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ _ 34 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 target target NOUN NN Number=Sing _ _ _ _ 38 gene gene NOUN NN Number=Sing _ _ _ _ 39 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 2513 # text = Together, these results demonstrate that ER and PR can be activated by endogenous or exogenous ligands to induce a genetic response that impairs TNF-alpha-induced apoptosis in U937 cells. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 ER er NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 PR pr NOUN NN Number=Sing _ _ _ _ 10 can can AUX MD VerbForm=Fin _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 15 or or CCONJ CC _ _ _ _ _ 16 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 17 ligands ligand NOUN NNS Number=Plur _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 induce induce VERB VB VerbForm=Inf _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 22 response response NOUN NN Number=Sing _ _ _ _ 23 that that PRON WDT PronType=Rel _ _ _ _ 24 impairs impair VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 U937 U937 NUM CD NumType=Card _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2514 # text = The data presented here suggest that the female steroid receptors play a role in regulation of the immune response by preventing apoptosis of monoblastoid cells; this effect might have important consequences in the clinical use of steroid receptor drugs. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 presented present VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 here here ADV RB PronType=Dem _ _ _ _ 5 suggest suggest ADV RBS Degree=Sup _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 female female ADJ JJ Degree=Pos _ _ _ _ 9 steroid steroid NOUN NN Number=Sing _ _ _ _ 10 receptors receptor NOUN NNS Number=Plur _ _ _ _ 11 play play VERB VB VerbForm=Inf _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 role role NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 regulation regulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 immune immune ADJ JJ Degree=Pos _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ _ 20 by by SCONJ IN _ _ _ _ _ 21 preventing prevent VERB VBG VerbForm=Ger _ _ _ _ 22 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 monoblastoid monoblastoid ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 ; ; PUNCT , _ _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 effect effect NOUN NN Number=Sing _ _ _ _ 29 might might AUX MD VerbForm=Fin _ _ _ _ 30 have have VERB VB VerbForm=Inf _ _ _ _ 31 important important ADJ JJ Degree=Pos _ _ _ _ 32 consequences consequence NOUN NNS Number=Plur _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 36 use use NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 steroid steroid ADJ JJ Degree=Pos _ _ _ _ 39 receptor receptor NOUN NN Number=Sing _ _ _ _ 40 drugs drug NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 2515 # text = --Vegeto, E., Pollio, G., Pellicciari, C., Maggi, A. 1 -- -- PUNCT NFP _ _ _ _ SpaceAfter=No 2 Vegeto Vegeto PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 E. E. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 Pollio Pollio PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 G. G. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 Pellicciari Pellicciari PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 C. c. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 Maggi Maggi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 A A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2516 # text = Estrogen and progesterone induction of survival of monoblastoid cells undergoing TNF-alpha-inuced apoptosis. 1 Estrogen Estrogen PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 progesterone progesterone ADJ JJ Degree=Pos _ _ _ _ 4 induction induction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 survival survival NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 monoblastoid monoblastoid ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 undergoing undergo VERB VBG VerbForm=Ger _ _ _ _ 11 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 inuced inuce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 apoptosis. apoptosis. NOUN NN Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2517 # text = Document 003003251 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003251 003003251 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2518 # text = Diminished responses to IL-13 by human monocytes differentiated in vitro: role of the IL-13Ralpha1 chain and STAT6. 1 Diminished Diminish ADJ JJ Degree=Pos _ _ _ _ 2 responses response NOUN NNS Number=Plur _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 13 13 NUM CD NumType=Card _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 10 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 vitro vitro NUM CD NumType=Card _ _ _ SpaceAfter=No 13 : : PUNCT : _ _ _ _ _ 14 role role NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 Ralpha1 ralpha1 NUM CD NumType=Card _ _ _ _ 21 chain chain NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 STAT6 Stat6 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2519 # text = The primary IL-13 receptor complex on human monocytes is believed to be a heterodimer comprised of the IL-4R alpha chain and the IL-2R gamma chain (gamma(c))-like molecule, IL-13R alpha1. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 primary primary ADJ JJ Degree=Pos _ _ _ _ 3 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 13 13 NUM CD NumType=Card _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 complex complex NOUN NN Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 believed believe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 17 comprised comprise VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 4R 4R PROPN NNP Number=Sing _ _ _ _ 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 chain chain NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 2R 2r NOUN NN Number=Sing _ _ _ _ 30 gamma gamma NOUN NN Number=Sing _ _ _ _ 31 chain chain NOUN NN Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 like like ADJ JJ Degree=Pos _ _ _ _ 40 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 13R 13R PROPN NNP Number=Sing _ _ _ _ 45 alpha1 alpha1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 2520 # text = mRNA levels for IL-13R alpha1, but not IL-4R alpha, were markedly decreased in in vitro monocyte-derived macrophages (MDMac), and with increasing time of monocytes in culture correlated with the loss of IL-13 regulation of lipopolysaccharide-induced TNF-alpha production. 1 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 13R 13R PROPN NNP Number=Sing _ _ _ _ 7 alpha1 alpha1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 not not ADV RB _ _ _ _ _ 11 IL Il ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 4R 4r NOUN NN Number=Sing _ _ _ _ 14 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 markedly markedly ADV RB _ _ _ _ _ 18 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 vitro vitro NUM CD NumType=Card _ _ _ _ 22 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 MDMac MDMac PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 with with SCONJ IN _ _ _ _ _ 32 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 33 time time NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 culture culture NOUN NN Number=Sing _ _ _ _ 38 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 with with ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 loss loss NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 13 13 NUM CD NumType=Card _ _ _ _ 46 regulation regulation NOUN NN Number=Sing _ _ _ _ 47 of of ADP IN _ _ _ _ _ 48 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 51 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 alpha alpha NOUN NN Number=Sing _ _ _ _ 54 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 2521 # text = Analysis of cell lines Daudi and THP-1 that differentially express gamma(c) and IL-13R alpha1 showed that IL-13 can activate STAT6 in IL-13R alpha1-positive THP-1 cells but not in gamma(c)-positive, IL-13R alpha1-negative Daudi cells. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 lines line NOUN NNS Number=Plur _ _ _ _ 5 Daudi Daudi PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 THP THP NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 that that ADV WRB PronType=Dem _ _ _ _ 11 differentially differentially ADV RB _ _ _ _ _ 12 express express ADJ JJ Degree=Pos _ _ _ _ 13 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 13R 13R PROPN NNP Number=Sing _ _ _ _ 21 alpha1 alpha1 NOUN NN Number=Sing _ _ _ _ 22 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - SYM SYM _ _ _ _ SpaceAfter=No 26 13 13 NUM CD NumType=Card _ _ _ _ 27 can can AUX MD VerbForm=Fin _ _ _ _ 28 activate activate VERB VB VerbForm=Inf _ _ _ _ 29 STAT6 STAT6 PROPN NNP Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 13R 13R PROPN NNP Number=Sing _ _ _ _ 34 alpha1 alpha1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 positive positive ADJ JJ Degree=Pos _ _ _ _ 37 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT , _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ _ 41 but but CCONJ CC _ _ _ _ _ 42 not not PART RB _ _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 48 - - PUNCT : _ _ _ _ SpaceAfter=No 49 positive positive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 50 , , PUNCT , _ _ _ _ _ 51 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 13R 13r PROPN NNP Number=Sing _ _ _ _ 54 alpha1 alpha1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 56 negative negative ADJ JJ Degree=Pos _ _ _ _ 57 Daudi Daudi NOUN NN Number=Sing _ _ _ _ 58 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 2522 # text = IL-13 activation of STAT6 was reduced in MDMac which was associated with diminished IL-13-induced expression of CD23 and MHC class II. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 13 13 NUM CD NumType=Card _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 STAT6 Stat6 PROPN NNP Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 MDMac MDMac PROPN NNP Number=Sing _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 diminished diminish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 IL- Il- SYM SYM _ _ _ _ SpaceAfter=No 17 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 CD23 CD23 NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 MHC MHC PROPN NNP Number=Sing _ _ _ _ 25 class class NOUN NN Number=Sing _ _ _ _ 26 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2523 # text = However, with reduced IL-13R alpha1 expression and low nuclear STAT6 activity, some IL-13-induced responses were unaltered in magnitude in MDMac. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 13R 13r NOUN NN Number=Sing _ _ _ _ 8 alpha1 alpha1 NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 low low ADJ JJ Degree=Pos _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 STAT6 Stat6 NOUN NN Number=Sing _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 some some DET DT _ _ _ _ _ 17 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 responses response NOUN NNS Number=Plur _ _ _ _ 23 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 unaltered unalter VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 magnitude magnitude NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 MDMac MDMac PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2524 # text = In the absence of functional IL-13R alpha1 and gamma(c), IL-13 must signal through an alternative receptor complex on MDMac. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 absence absence NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 functional functional ADJ JJ Degree=Pos _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 13R 13R PROPN NNP Number=Sing _ _ _ _ 9 alpha1 alpha1 NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 13 13 NUM CD NumType=Card _ _ _ _ 19 must must AUX MD VerbForm=Fin _ _ _ _ 20 signal signal VERB VB VerbForm=Inf _ _ _ _ 21 through through ADP IN _ _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 24 receptor receptor NOUN NN Number=Sing _ _ _ _ 25 complex complex NOUN NN Number=Sing _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 MDMac MDMac PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2525 # text = Experiments with a blocking antibody to IL-4R alpha showed that this chain remains an essential component of the IL-13 receptor complex on MDMac. 1 Experiments Experiment NOUN NNS Number=Plur _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 blocking block NOUN NN Number=Sing _ _ _ _ 5 antibody antibody NOUN NN Number=Sing _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 4 for X GW _ _ _ _ SpaceAfter=No 10 R r X GW _ _ _ _ _ 11 alpha alpha X GW _ _ _ _ _ 12 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 15 chain chain NOUN NN Number=Sing _ _ _ _ 16 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 essential essential ADJ JJ Degree=Pos _ _ _ _ 19 component component NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 13 13 NUM CD NumType=Card _ _ _ _ 25 receptor receptor NOUN NN Number=Sing _ _ _ _ 26 complex complex NOUN NN Number=Sing _ _ _ _ 27 on on ADP IN _ _ _ _ _ 28 MDMac MDMac PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2526 # text = Document 003003255 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003255 003003255 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2527 # text = A role for RanBP1 in the release of CRM1 from the nuclear pore complex in a terminal step of nuclear export. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 RanBP1 RanBP1 NUM CD NumType=Card _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 release release NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 CRM1 CRM1 PROPN NNP Number=Sing _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 pore pore NOUN NN Number=Sing _ _ _ _ 14 complex complex NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 18 step step NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 export export NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2528 # text = We recently developed an assay in which nuclear export of the shuttling transcription factor NFAT (nuclear factor of activated T cells) can be reconstituted in permeabilized cells with the GTPase Ran and the nuclear export receptor CRM1. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 recently recently ADV RB _ _ _ _ _ 3 developed develop VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 assay assay NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 export export NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 shuttling shuttling VERB VBG VerbForm=Ger _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 can can AUX MD VerbForm=Fin _ _ _ _ 25 be be AUX VB VerbForm=Inf _ _ _ _ 26 reconstituted reconstitute VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 permeabilized permeabilize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 GTPase GTPase PROPN NNP Number=Sing _ _ _ _ 33 Ran ran PROPN NNP Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 37 export export NOUN NN Number=Sing _ _ _ _ 38 receptor receptor NOUN NN Number=Sing _ _ _ _ 39 CRM1 Crm1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 2529 # text = We have now used this assay to identify another export factor. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 now now ADV RB _ _ _ _ _ 4 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 assay assay NOUN NN Number=Sing _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 identify identify VERB VB VerbForm=Inf _ _ _ _ 9 another another DET DT _ _ _ _ _ 10 export export NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 2530 # text = After preincubation of permeabilized cells with a Ran mutant that cannot hydrolyze GTP (RanQ69L), cytosol supports NFAT export, but CRM1 and Ran alone do not. 1 After after ADP IN _ _ _ _ _ 2 preincubation preincubation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 permeabilized permeabilize ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 Ran ran PROPN NNP Number=Sing _ _ _ _ 9 mutant mutant NOUN NN Number=Sing _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 12 not not PART RB _ _ _ _ _ 13 hydrolyze hydrolyze VERB VB VerbForm=Inf _ _ _ _ 14 GTP GTP PROPN NNP Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 RanQ69L RanQ69L PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 20 supports support NOUN NNS Number=Plur _ _ _ _ 21 NFAT Nfat PRON WDT PronType=Rel _ _ _ _ 22 export export VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 but but CCONJ CC _ _ _ _ _ 25 CRM1 CRM1 PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 Ran ran PROPN NNP Number=Sing _ _ _ _ 28 alone alone ADV RB _ _ _ _ _ 29 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 not not PART RB _ _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2531 # text = The RanQ69L preincubation leads to accumulation of CRM1 at the cytoplasmic periphery of the nuclear pore complex (NPC) in association with the p62 complex and Can/Nup214. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 RanQ69L Ranq69l PROPN NNP Number=Sing _ _ _ _ 3 preincubation preincubation NOUN NN Number=Sing _ _ _ _ 4 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 accumulation accumulation VERB VB VerbForm=Inf _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 CRM1 CRM1 NOUN NN Number=Sing _ _ _ _ 9 at at ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 12 periphery periphery NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 pore pore NOUN NN Number=Sing _ _ _ _ 17 complex complex NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 NPC NPC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 association association NOUN NN Number=Sing _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 p62 p62 NOUN NN Number=Sing _ _ _ _ 26 complex complex NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 Can Can PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 / / PUNCT , _ _ _ _ SpaceAfter=No 30 Nup214 Nup214 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2532 # text = RanGTP-dependent association of CRM1 with these nucleoporins was reconstituted in vitro. 1 RanGTP- RanGTP- SYM NFP _ _ _ _ SpaceAfter=No 2 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 3 association association NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 CRM1 CRM1 PROPN NNP Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 nucleoporins nucleoporin NOUN NNS Number=Plur _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 reconstituted reconstitute VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 2533 # text = By biochemical fractionation and reconstitution, we showed that RanBP1 restores nuclear export after the RanQ69L preincubation. 1 By by ADP IN _ _ _ _ _ 2 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 3 fractionation fractionation NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 reconstitution reconstitution NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 8 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 RanBP1 RanBP1 PROPN NNP Number=Sing _ _ _ _ 11 restores restore VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 export export NOUN NN Number=Sing _ _ _ _ 14 after after ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 RanQ69L Ranq69l NOUN NN Number=Sing _ _ _ _ 17 preincubation preincubation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2534 # text = It also stimulates nuclear export in cells that have not been preincubated with RanQ69L. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 export export NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 12 preincubated preincubate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 RanQ69L Ranq69l PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 2535 # text = RanBP1 as well as Ran-binding domains of the cytoplasmic nucleoporin RanBP2 promote the release of CRM1 from the NPC. 1 RanBP1 Ranbp1 NOUN NN Number=Sing _ _ _ _ 2 as as ADV RB _ _ _ _ _ 3 well well ADV RB Degree=Pos _ _ _ _ 4 as as ADP IN _ _ _ _ _ 5 Ran ran PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 domains domain NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 12 nucleoporin nucleoporin NOUN NN Number=Sing _ _ _ _ 13 RanBP2 Ranbp2 PART TO Abbr=Yes _ _ _ _ 14 promote promote VERB VB VerbForm=Inf _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 release release NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 CRM1 Crm1 PROPN NNP Number=Sing _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 NPC Npc NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2536 # text = Taken together, our results indicate that RanGTP is important for the targeting of export complexes to the cytoplasmic side of the NPC and that RanBP1 and probably RanBP2 are involved in the dissociation of nuclear export complexes from the NPC in a terminal step of transport. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 RanGTP RanGTP PROPN NNP Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 important important ADJ JJ Degree=Pos _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 targeting targeting NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 export export NOUN NN Number=Sing _ _ _ _ 16 complexes complex NOUN NNS Number=Plur _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 20 side side NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 NPC NPC PROPN NNP Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 RanBP1 RanBP1 PROPN NNP Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 probably probably ADV RB _ _ _ _ _ 29 RanBP2 Ranbp2 NOUN NN Number=Sing _ _ _ _ 30 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 involved involved ADJ JJ Degree=Pos _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 dissociation dissociation NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 37 export export NOUN NN Number=Sing _ _ _ _ 38 complexes complex NOUN NNS Number=Plur _ _ _ _ 39 from from ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 NPC NPC PROPN NNP Number=Sing _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 44 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 45 step step NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 transport transport NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2537 # text = Document 003003265 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003265 003003265 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2538 # text = 1,25-Dihydroxyvitamin D3 receptor RNA: expression in hematopoietic cells. 1 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 Dihydroxyvitamin Dihydroxyvitamin NOUN NN Number=Sing _ _ _ _ 4 D3 D3 NOUN NN Number=Sing _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ _ 6 RNA RNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 : : PUNCT : _ _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2539 # text = 1,25-Dihydroxyvitamin D3 [1,25(OH)2D3] induces differentiation and inhibits proliferation of myeloid leukemic cells from various lines and patients; these effects are probably mediated through the 1,25(OH)2D3 receptor. 1 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 Dihydroxyvitamin Dihydroxyvitamin NOUN NN Number=Sing _ _ _ _ 4 D3 D3 NOUN NN Number=Sing _ _ _ _ 5 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 OH Oh INTJ UH _ _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 2D3 2D3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ] ] PUNCT -RRB- _ _ _ _ _ 12 induces induce NOUN NNS Number=Plur _ _ _ _ 13 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 inhibits inhibits NOUN NNS Number=Plur _ _ _ _ 16 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 19 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 various various ADJ JJ Degree=Pos _ _ _ _ 23 lines line NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 ; ; PUNCT , _ _ _ _ _ 27 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 28 effects effect NOUN NNS Number=Plur _ _ _ _ 29 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 probably probably ADV RB _ _ _ _ _ 31 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 through through ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 OH oh INTJ UH _ _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 38 2D3 2D3 NUM CD NumType=Card _ _ _ _ 39 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 2540 # text = Little is known of expression of 1,25(OH)2D3 receptor RNA in hematopoietic cells. 1 Little little PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 OH oh INTJ UH _ _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 2D3 2D3 NUM CD NumType=Card _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 RNA RNa PROPN NNP Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2541 # text = We examined the expression and modulation of expression of 1,25(OH)2D3 receptor RNA in various proliferating and nonproliferating hematopoietic cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 modulation modulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 OH oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 2D3 2D3 NUM CD NumType=Card _ _ _ _ 15 receptor receptor NOUN NN Number=Sing _ _ _ _ 16 RNA RNa NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 various various ADJ JJ Degree=Pos _ _ _ _ 19 proliferating proliferating NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 nonproliferating nonproliferat VERB VBG VerbForm=Ger _ _ _ _ 22 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2542 # text = Constitutive expression of 1,25(OH)2D3 receptor 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 2D3 2D3 NUM CD NumType=Card _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ _ # sent_id = 2543 # text = RNA was detected in various kinds of hematopoietic cells, including macrophages and activated T lymphocytes, as well as in cell lines KG-1 (myeloblasts), HL-60 (promyelocytes), ML-3 (myelomonoblasts), U937, THP-1 (monoblasts), K562 (erythroblasts), and S-LB1 (HTLV-1-transfected T lymphocytes). 1 RNA RNa PROPN NNP Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 various various ADJ JJ Degree=Pos _ _ _ _ 6 kinds kind NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 including include VERB VBG VerbForm=Ger _ _ _ _ 12 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 as as ADV RB _ _ _ _ _ 19 well well ADV RB Degree=Pos _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 lines line NOUN NNS Number=Plur _ _ _ _ 24 KG kg PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - SYM SYM _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 myeloblasts myeloblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 HL HL SYM $ _ _ _ _ SpaceAfter=No 32 - - SYM SYM _ _ _ _ SpaceAfter=No 33 60 60 NUM CD NumType=Card _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 promyelocytes promyelocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 ML ML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - SYM SYM _ _ _ _ SpaceAfter=No 40 3 3 NUM CD NumType=Card _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 myelomonoblasts myelomonoblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 U937 U937 NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 1 1 NUM CD NumType=Card _ _ _ _ 50 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 51 monoblasts monoblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 53 , , PUNCT , _ _ _ _ _ 54 K562 K562 NUM CD NumType=Card _ _ _ _ 55 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 56 erythroblasts erythroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 57 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 58 , , PUNCT , _ _ _ _ _ 59 and and CCONJ CC _ _ _ _ _ 60 S- S- NOUN NN Number=Sing _ _ _ SpaceAfter=No 61 LB lb NOUN NN Number=Sing _ _ _ SpaceAfter=No 62 1 1 NUM CD NumType=Card _ _ _ _ 63 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 64 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 65 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 66 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 67 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 68 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 69 T t PROPN NNP Number=Sing _ _ _ _ 70 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 71 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 72 . . PUNCT . _ _ _ _ _ # sent_id = 2544 # text = Receptor transcripts were 4.6 kilobases (kb), and no variant sizes were observed. 1 Receptor Receptor NOUN NN Number=Sing _ _ _ _ 2 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 4.6 4.6 NUM CD NumType=Card _ _ _ _ 5 kilobases kilobase NOUN NNS Number=Plur _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 kb kb NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 no no DET DT _ _ _ _ _ 12 variant variant NOUN NN Number=Sing _ _ _ _ 13 sizes size VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 observed observe ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2545 # text = All cell lines examined in this group also expressed 1,25(OH)2D3 receptors. 1 All all DET DT _ _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 lines line NOUN NNS Number=Plur _ _ _ _ 4 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 group group NOUN NN Number=Sing _ _ _ _ 8 also also ADV RB _ _ _ _ _ 9 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 OH oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 2D3 2D3 NUM CD NumType=Card _ _ _ _ 15 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2546 # text = Most B lymphocyte lines expressed negligible levels of 1,25(OH)2D3 receptor 1 Most most ADJ JJS Degree=Sup _ _ _ _ 2 B benefit ADJ JJ Degree=Pos _ _ _ _ 3 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 4 lines line NOUN NNS Number=Plur _ _ _ _ 5 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 negligible negligible ADJ JJ Degree=Pos _ _ _ _ 7 levels level NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 2D3 2D3 NUM CD NumType=Card _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ # sent_id = 2547 # text = RNA and protein; however; analysis of a lymphoid/myeloid somatic hybrid suggested that suppression of expression of 1,25(OH)2D3 receptor 1 RNA RNa PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 ; ; PUNCT , _ _ _ _ _ 5 however however ADV RB _ _ _ _ SpaceAfter=No 6 ; ; PUNCT , _ _ _ _ _ 7 analysis analysis NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 13 somatic somatic ADJ JJ Degree=Pos _ _ _ _ 14 hybrid hybrid NOUN NN Number=Sing _ _ _ _ 15 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 17 suppression suppression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 OH oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 2D3 2D3 NUM CD NumType=Card _ _ _ _ 26 receptor receptor NOUN NN Number=Sing _ _ _ _ # sent_id = 2548 # text = RNA in B lymphocytes may be a dominant characteristic. 1 RNA RNa NOUN NN Number=Sing _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 B b ADJ JJ Degree=Pos _ _ _ _ 4 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 5 may may AUX MD VerbForm=Fin _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 9 characteristic characteristic NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 2549 # text = HL-60 cells were cultured with 10(-7) mol/L 1,25(OH)2D3 for 24 to 72 hours, and levels of expression of 1,25(OH)2D3 receptor and its RNA were examined. 1 HL Hl INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 60 60 NUM CD NumType=Card _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 cultured culture VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 (- (- PUNCT . _ _ _ _ SpaceAfter=No 10 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 mol/L mol/l NOUN NN Number=Sing _ _ _ _ 13 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 OH oh INTJ UH _ _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 2D3 2D3 NUM CD NumType=Card _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 24 24 NUM CD NumType=Card _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 72 72 NUM CD NumType=Card _ _ _ _ 22 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 levels level NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 OH oh INTJ UH _ _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 2D3 2D3 NUM CD NumType=Card _ _ _ _ 34 receptor receptor NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 37 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 RNA RNA PROPN NNP Number=Sing _ _ _ _ 39 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 40 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 2550 # text = Levels of RNA coding for the receptor were not modulated by exposure to high levels of ligand. 1 Levels level NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 RNA RNA PROPN NNP Number=Sing _ _ _ _ 4 coding code VERB VBG VerbForm=Ger _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 modulated modulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 exposure exposure NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 high high ADJ JJ Degree=Pos _ _ _ _ 15 levels level NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2551 # text = Levels of occupied 1,25(OH)2D3 receptor protein increased in these HL-60 cells; but the total number of 1,25(OH)2D3 receptors decreased about 50% at 24 hours and returned toward normal at 72 hours. 1 Levels level NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 occupied occupied ADJ JJ Degree=Pos _ _ _ _ 4 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 2D3 2D3 NUM CD NumType=Card _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 14 HL HL NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 60 60 NUM CD NumType=Card _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 ; ; PUNCT , _ _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 total total ADJ JJ Degree=Pos _ _ _ _ 22 number number NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 2D3 2D3 NUM CD NumType=Card _ _ _ _ 29 receptors receptor NOUN NNS Number=Plur _ _ _ _ 30 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 about about ADV RB _ _ _ _ _ 32 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 % % SYM NN Number=Sing _ _ _ _ 34 at at ADP IN _ _ _ _ _ 35 24 24 NUM CD NumType=Card _ _ _ _ 36 hours hour NOUN NNS Number=Plur _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 returned return VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 toward toward ADP IN _ _ _ _ _ 40 normal normal ADJ JJ Degree=Pos _ _ _ _ 41 at at ADP IN _ _ _ _ _ 42 72 72 NUM CD NumType=Card _ _ _ _ 43 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 2552 # text = Steady-state levels of 1,25(OH)2D3 receptor 1 Steady steady ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 state state NOUN NN Number=Sing _ _ _ _ 4 levels level NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 2D3 2D3 NUM CD NumType=Card _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ # sent_id = 2553 # text = RNA were not affected by terminal differentiation of HL-60 toward either granulocytes or macrophages. 1 RNA RNA NOUN NN Number=Sing _ _ _ _ 2 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 not not PART RB _ _ _ _ _ 4 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 7 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 60 60 NUM CD NumType=Card _ _ _ _ 12 toward toward ADP IN _ _ _ _ _ 13 either either DET DT _ _ _ _ _ 14 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ _ 15 or or CCONJ CC _ _ _ _ _ 16 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2554 # text = Nondividing macrophages from normal individuals also expressed 1,25(OH)2D3 receptor RNA. 1 Nondividing Nondivid VERB VBG VerbForm=Ger _ _ _ _ 2 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 normal normal ADJ JJ Degree=Pos _ _ _ _ 5 individuals individual NOUN NNS Number=Plur _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 2D3 2D3 NUM CD NumType=Card _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ _ 14 RNA RNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 2555 # text = In contrast, nondividing peripheral blood lymphocytes from normal individuals did not express 1,25(OH)2D3 receptor RNA; with stimulation of proliferation of these cells, accumulation of 1,25(OH)2D3 receptor RNA increased markedly. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 nondividing nondivid VERB VBG VerbForm=Ger _ _ _ _ 5 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 6 blood blood NOUN NN Number=Sing _ _ _ _ 7 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 normal normal ADJ JJ Degree=Pos _ _ _ _ 10 individuals individual NOUN NNS Number=Plur _ _ _ _ 11 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 express express VERB VB VerbForm=Inf _ _ _ _ 14 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 OH oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 2D3 2D3 NUM CD NumType=Card _ _ _ _ 19 receptor receptor NOUN NN Number=Sing _ _ _ _ 20 RNA RNa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ; ; PUNCT , _ _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 OH oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 2D3 2D3 NUM CD NumType=Card _ _ _ _ 37 receptor receptor NOUN NN Number=Sing _ _ _ _ 38 RNA RNa SYM SYM _ _ _ _ _ 39 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 markedly markedly ADV RB _ _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 2556 # text = Half-life (t1/2) of 1,25(OH)2D3 receptor 1 Half half NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 life life NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 t1/2 t1/2 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 2D3 2D3 NUM CD NumType=Card _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ _ # sent_id = 2557 # text = RNA in T lymphocytes was short (1 hour) as determined by measuring decay of the message after addition of actinomycin D. Consistent with this short t1/2, accumulation of 1,25(OH)2D3 receptor RNA increased in cells as their protein synthesis was inhibited. 1 RNA RNA PROPN NNP Number=Sing _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 short short ADJ JJ Degree=Pos _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 hour hour NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 as as ADV RB _ _ _ _ _ 12 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by SCONJ IN _ _ _ _ _ 14 measuring measure VERB VBG VerbForm=Ger _ _ _ _ 15 decay decay NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 message message NOUN NN Number=Sing _ _ _ _ 19 after after ADP IN _ _ _ _ _ 20 addition addition NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 actinomycin actinomycin ADP IN _ _ _ _ _ 23 D. D. PROPN NNP Number=Sing _ _ _ _ 24 Consistent consistent PROPN NNP Number=Sing _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 27 short short ADJ JJ Degree=Pos _ _ _ _ 28 t1/2 t1/2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 OH oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 2D3 2D3 NUM CD NumType=Card _ _ _ _ 37 receptor receptor NOUN NN Number=Sing _ _ _ _ 38 RNA RNa PROPN NNP Number=Sing _ _ _ _ 39 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ _ 42 as as ADP IN _ _ _ _ _ 43 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 44 protein protein NOUN NN Number=Sing _ _ _ _ 45 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 46 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 47 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 2558 # text = Further studies are required to understand the physiologic role of 1,25(OH)2D3 receptors in myeloid cells and proliferating T lymphocytes. 1 Further further ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 understand understand VERB VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 physiologic physiologic NOUN NN Number=Sing _ _ _ _ 9 role role NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 OH oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 2D3 2D3 NUM CD NumType=Card _ _ _ _ 16 receptors receptor NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 proliferating proliferat VERB VBG VerbForm=Ger _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2559 # text = Document 003003267 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003267 003003267 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2560 # text = Interleukin-2 induces tyrosine phosphorylation and nuclear translocation of stat3 in human T lymphocytes. 1 Interleukin Interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 induces induce NOUN NNS Number=Plur _ _ _ _ 5 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 6 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 translocation translocation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 stat3 stat3 NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2561 # text = An early biochemical event associated with T cell activation through the interleukin-2 receptor (IL-2R) is tyrosine phosphorylation of several intracellular substrates. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 early early ADJ JJ Degree=Pos _ _ _ _ 3 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 4 event event NOUN NN Number=Sing _ _ _ _ 5 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 through through ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 receptor receptor NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2R 2r PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 23 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 several several ADJ JJ Degree=Pos _ _ _ _ 26 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 27 substrates substrate NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2562 # text = The exact mechanism by which IL-2 regulates transcription of different genes is presently unknown. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 exact exact ADJ JJ Degree=Pos _ _ _ _ 3 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 which which PRON WDT PronType=Rel _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 regulates regulate NOUN NNS Number=Plur _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 different different ADJ JJ Degree=Pos _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 presently presently ADV RB _ _ _ _ _ 16 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2563 # text = Here, we report that stimulation through the IL-2R induced tyrosine phosphorylation and subsequent nuclear translocation of stat3, a newly identified member of the signal transducers and activators of transcription (STAT) family of proteins. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 7 through through ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 R be ADP IN _ _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 15 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 translocation translocation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 stat3 stat3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 newly newly ADV RB _ _ _ _ _ 25 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 member member NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 signal signal ADJ JJ Degree=Pos _ _ _ _ 30 transducers transducer NOUN NNS Number=Plur _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 activators activator NOUN NNS Number=Plur _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 STAT STAT NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 family family NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 2564 # text = In contrast, stat1 proteins were not tyrosine phosphorylated after IL-2 ligation, whereas tyrosine-phosphorylated stat1 proteins (91 and 84 kDa proteins) were translocated to the nucleus following interferon-gamma treatment of HeLa cells. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 stat1 stat1 NUM CD NumType=Card _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 tyrosine tyrosine ADV RB _ _ _ _ _ 9 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 after after ADP IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 ligation ligation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 whereas whereas SCONJ IN _ _ _ _ _ 17 tyrosine tyrosine NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 stat1 stat1 NOUN NN Number=Sing _ _ _ _ 21 proteins protein NOUN NNS Number=Plur _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 91 91 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 84 84 NUM CD NumType=Card _ _ _ _ 26 kDa kDa PROPN NNP Number=Sing _ _ _ _ 27 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 translocated translocate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 34 following follow VERB VBG VerbForm=Ger _ _ _ _ 35 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 gamma gamma NOUN NN Number=Sing _ _ _ _ 38 treatment treatment NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 2565 # text = Apart from stat3, another cytoplasmic protein was tyrosine phosphorylated and subsequently translocated to the nucleus in response to IL-2. 1 Apart apart ADV RB _ _ _ _ _ 2 from from ADP IN _ _ _ _ _ 3 stat3 stat3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 another another DET DT _ _ _ _ _ 6 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 tyrosine tyrosine ADV RB _ _ _ _ _ 10 phosphorylated phosphorylated VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 subsequently subsequently ADV RB _ _ _ _ _ 13 translocated translocate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 response response NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2566 # text = This protein had an apparent molecular mass of 84 kDa and was not recognized by stat3 or stat1 mAb or antisera. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 apparent apparent ADJ JJ Degree=Pos _ _ _ _ 6 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 7 mass mass NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 84 84 NUM CD NumType=Card _ _ _ _ 10 kDa kDa PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 recognized recognize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 stat3 stat3 NUM CD NumType=Card _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 stat1 stat1 NUM CD NumType=Card _ _ _ _ 19 mAb mAb NOUN NN Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 antisera antisera NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2567 # text = Since IL-2 induced nuclear translocation of the 84 kDa protein and stat3 followed identical kinetics, p84 is a candidate for a new, yet undefined, member of the STAT family. 1 Since since ADP IN _ _ _ _ _ 2 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 translocation translocation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 84 84 NUM CD NumType=Card _ _ _ _ 11 kDa kDa NOUN NN Number=Sing _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 stat3 stat3 NOUN NN Number=Sing _ _ _ _ 15 followed follow VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 identical identical ADJ JJ Degree=Pos _ _ _ _ 17 kinetics kinetic NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 p84 p84 NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 candidate candidate NOUN NN Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 new new ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 yet yet CCONJ CC _ _ _ _ _ 28 undefined undefin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 member member NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 34 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 2568 # text = Taken together, we report that IL-2 induces tyrosine phosphorylation and subsequent nuclear translocation of stat3 and an as yet undefined 84-kDa protein in antigen-specific human T cell lines. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 induces induce NOUN NNS Number=Plur _ _ _ _ 11 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 12 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 translocation translocation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 stat3 stat3 NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 as as SCONJ IN _ _ _ _ _ 22 yet yet ADV RB _ _ _ _ _ 23 undefined undefin VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 84 84 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kDa kDa NOUN NN Number=Sing _ _ _ _ 27 protein protein NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 antigen antigen ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 30 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 31 human human ADJ JJ Degree=Pos _ _ _ _ 32 T t PROPN NNP Number=Sing _ _ _ _ 33 cell cell NOUN NN Number=Sing _ _ _ _ 34 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2569 # text = Document 003003268 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003268 003003268 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2570 # text = Activation of nuclear factor-kappaB via T cell receptor requires a Raf kinase and Ca2+ influx. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 -kappaB -kappab NOUN NN Number=Sing _ _ _ _ 6 via via ADP IN _ _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ _ 10 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 Raf Raf PROPN NNP Number=Sing _ _ _ _ 13 kinase kinase NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 + + SYM SYM _ _ _ _ _ 17 influx influx NUM CD NumType=Card _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2571 # text = Functional synergy between Raf and calcineurin. 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 synergy synergy NOUN NN Number=Sing _ _ _ _ 3 between between ADP IN _ _ _ _ _ 4 Raf Raf PROPN NNP Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 calcineurin calcineurin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2572 # text = Signals transduced via the TCR activate the transcription factor nuclear factor-kappaB (NF-kappaB), which, in turn, is critical to the transcriptional induction of many genes important for the proliferation and expression of a differentiated phenotype. 1 Signals signal NOUN NNS Number=Plur _ _ _ _ 2 transduced transduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 via via ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 TCR TCR PROPN NNP Number=Sing _ _ _ _ 6 activate activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 -kappaB -kappaB PROPN NNP Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 turn turn NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 critical critical ADJ JJ Degree=Pos _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 29 induction induction NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 many many ADJ JJ Degree=Pos _ _ _ _ 32 genes gene NOUN NNS Number=Plur _ _ _ _ 33 important important ADJ JJ Degree=Pos _ _ _ _ 34 for for ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 expression expression NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 41 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 phenotype phenotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 2573 # text = Treatment of T cells with the protein kinase C activator PMA in combination with Ca2+ ionophores mimics this process, and the two agents are often substituted for TCR stimulation, bypassing the TCR. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 kinase kinase NOUN NN Number=Sing _ _ _ _ 9 C C PROPN NNP Number=Sing _ _ _ _ 10 activator activator PROPN NNP Number=Sing _ _ _ _ 11 PMA PMA PROPN NNP Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 combination combination NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 + + SYM SYM _ _ _ _ _ 17 ionophores ionophore NOUN NNS Number=Plur _ _ _ _ 18 mimics mimics NOUN NNS Number=Plur _ _ _ _ 19 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 20 process process NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 two two NUM CD NumType=Card _ _ _ _ 25 agents agent NOUN NNS Number=Plur _ _ _ _ 26 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 often often ADV RB _ _ _ _ _ 28 substituted substitute VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 TCR Tcr ADJ JJR Degree=Cmp _ _ _ _ 31 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 bypassing bypasse VERB VBG VerbForm=Ger _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 TCR Tcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 2574 # text = Here we identify intracellular signaling components involved in activation of NF-kappaB following TCR stimulation. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 identify identify VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 intracellular intracelular ADJ JJ Degree=Pos _ _ _ _ 5 signaling signal NOUN NN Number=Sing _ _ _ _ 6 components component NOUN NNS Number=Plur _ _ _ _ 7 involved involved ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 14 following follow VERB VBG VerbForm=Ger _ _ _ _ 15 TCR Tcr ADP IN _ _ _ _ _ 16 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2575 # text = TCR signaling was triggered by treating Jurkat T cells with PHA or anti-CD3 Abs, and NF-kappaB activation was monitored by electrophoretic mobility shift assays and/or by kappaB-dependent reporter assays. 1 TCR Tcr NOUN NN Number=Sing _ _ _ _ 2 signaling signaling NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 triggered trigger VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by SCONJ IN _ _ _ _ _ 6 treating treat VERB VBG VerbForm=Ger _ _ _ _ 7 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 8 T T PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 PHA PHa NOUN NN Number=Sing _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 anti-CD3 anti-CD3 NOUN NN Number=Sing _ _ _ _ 14 Abs Ab NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 monitored monitor VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 25 mobility mobility NOUN NN Number=Sing _ _ _ _ 26 shift shift NOUN NN Number=Sing _ _ _ _ 27 assays assays NOUN NNS Number=Plur _ _ _ _ 28 and and CCONJ CC _ _ _ _ SpaceAfter=No 29 / / PUNCT , _ _ _ _ SpaceAfter=No 30 or or CCONJ CC _ _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 35 reporter reporter NOUN NN Number=Sing _ _ _ _ 36 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 2576 # text = Contrary to the idea that protein kinase C is involved in TCR-mediated activation of NF-kappaB, high doses of staurosporine did not interfere with activation of NF-kappaB by PHA, while the same dose of staurosporine completely blocked activation by PMA. 1 Contrary contrary ADJ JJ Degree=Pos _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 idea idea NOUN NN Number=Sing _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 protein protein VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 C c NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 involved involved ADJ JJ Degree=Pos _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 high high ADJ JJ Degree=Pos _ _ _ _ 22 doses dos NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 staurosporine staurosporine NOUN NN Number=Sing _ _ _ _ 25 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 not not PART RB _ _ _ _ _ 27 interfere interfere VERB VB VerbForm=Inf _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 PHA PHA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 while while SCONJ IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 same same ADJ JJ Degree=Pos _ _ _ _ 40 dose dose NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 staurosporine staurosporine NOUN NN Number=Sing _ _ _ _ 43 completely completely ADV RB _ _ _ _ _ 44 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 activation activation NOUN NN Number=Sing _ _ _ _ 46 by by ADP IN _ _ _ _ _ 47 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 2577 # text = PHA-induced kappaB-dependent reporter activity was, however, effectively blocked by a dominant negative form of Raf-1, suggesting a critical role for a Raf kinase. 1 PHA Pha NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 kappaB kappaB NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 7 reporter reporter NOUN NN Number=Sing _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 however however ADV RB _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 effectively effectively ADV RB _ _ _ _ _ 14 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 18 negative negative ADJ JJ Degree=Pos _ _ _ _ 19 form form NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 critical critical ADJ JJ Degree=Pos _ _ _ _ 28 role role NOUN NN Number=Sing _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 Raf Raf PROPN NNP Number=Sing _ _ _ _ 32 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 2578 # text = The TCR-mediated activation of NF-kappaB was also dependent on a Ca2+ influx, because the Ca2+ channel blocker, SK&F 96365, as well as other agents that prevented the Ca2+ influx, inhibited NF-kappaB activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 TCR Tcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 also also ADV RB _ _ _ _ _ 12 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 Ca2 ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 + + SYM SYM _ _ _ _ _ 17 influx influx NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 because because SCONJ IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 Ca2 ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 + + SYM SYM _ _ _ _ _ 23 channel channel NOUN NN Number=Sing _ _ _ _ 24 blocker blocker NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 SK&F SK&F PROPN NNP Number=Sing _ _ _ _ 27 96365 96365 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 as as ADV RB _ _ _ _ _ 30 well well ADV RB Degree=Pos _ _ _ _ 31 as as ADP IN _ _ _ _ _ 32 other other ADJ JJ Degree=Pos _ _ _ _ 33 agents agent NOUN NNS Number=Plur _ _ _ _ 34 that that PRON WDT PronType=Rel _ _ _ _ 35 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 Ca2 ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 + + CCONJ CC _ _ _ _ _ 39 influx influx NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 45 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 2579 # text = Cotransfection of a constitutively active form of calcineurin largely substituted for the Ca2+ requirement and reversed the blockade by SK&F 96365. 1 Cotransfection Cotransfection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 constitutively constitutively ADV RB _ _ _ _ _ 5 active active ADJ JJ Degree=Pos _ _ _ _ 6 form form NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 9 largely largely ADV RB _ _ _ _ _ 10 substituted substitute VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 Ca2 ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 + + CCONJ CC _ _ _ _ _ 15 requirement requirement NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 reversed reverse VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 blockade blockade NOUN NN Number=Sing _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 SK&F SK&F PROPN NNP Number=Sing _ _ _ _ 22 96365 96365 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2580 # text = Consistent with these observations, coexpression of constitutively active forms of Raf-1 and calcineurin synergistically induced kappaB-dependent reporter activity, suggesting a physiologically relevant functional interaction between the kinase and the phosphatase. 1 Consistent consistent ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 observations observation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 coexpression coexpression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 constitutively constitutively ADV RB _ _ _ _ _ 9 active active ADJ JJ Degree=Pos _ _ _ _ 10 forms form NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 calcineurin calcineurin VERB VB VerbForm=Inf _ _ _ _ 17 synergistically synergistically ADV RB _ _ _ _ _ 18 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 22 reporter reporter NOUN NN Number=Sing _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 physiologically physiologically ADV RB _ _ _ _ _ 28 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 29 functional functional ADJ JJ Degree=Pos _ _ _ _ 30 interaction interaction NOUN NN Number=Sing _ _ _ _ 31 between between ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 kinase kinase NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 phosphatase phosphatase NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2581 # text = Document 003003270 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003270 003003270 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2582 # text = Increased proliferation, cytotoxicity, and gene expression after stimulation of human peripheral blood T lymphocytes through a surface ganglioside (GD3) [published erratum appears in J Immunol 1994 Jul 15;153(2):910] Previous studies have suggested that gangliosides have an important role in cell signaling and recognition. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 cytotoxicity cytotoxicity NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 after after ADP IN _ _ _ _ _ 10 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 14 blood blood NOUN NN Number=Sing _ _ _ _ 15 T T PROPN NNP Number=Sing _ _ _ _ 16 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 through through ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 surface surface NOUN NN Number=Sing _ _ _ _ 20 ganglioside ganglioside NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 GD3 GD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 published publish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 erratum erratum NOUN NN Number=Sing _ _ _ _ 27 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 J j PROPN NNP Number=Sing _ _ _ _ 30 Immunol Immunol PROPN NNP Number=Sing _ _ _ _ 31 1994 1994 NUM CD NumType=Card _ _ _ _ 32 Jul Jul PROPN NNP Number=Sing _ _ _ _ 33 15;153 15;153 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 :910 :910 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n 39 Previous previous ADJ JJ Degree=Pos _ _ _ _ 40 studies study NOUN NNS Number=Plur _ _ _ _ 41 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 42 suggested suggest VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 that that SCONJ IN _ _ _ _ _ 44 gangliosides ganglioside NOUN NNS Number=Plur _ _ _ _ 45 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 46 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 47 important important ADJ JJ Degree=Pos _ _ _ _ 48 role role NOUN NN Number=Sing _ _ _ _ 49 in in ADP IN _ _ _ _ _ 50 cell cell NOUN NN Number=Sing _ _ _ _ 51 signaling signaling NOUN NN Number=Sing _ _ _ _ 52 and and CCONJ CC _ _ _ _ _ 53 recognition recognition NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 2583 # text = However, their specific function in these processes has not been clearly defined. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 function function NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 processes processe NOUN NNS Number=Plur _ _ _ _ 9 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 12 clearly clearly ADV RB _ _ _ _ _ 13 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 2584 # text = A mAb, R24, that reacts specifically with a cell surface ganglioside (GD3) has been demonstrated to stimulate proliferation of T cells derived from human peripheral blood. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 mAb mAb NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 R24 R24 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 reacts react VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 specifically specifically ADV RB _ _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 surface surface NOUN NN Number=Sing _ _ _ _ 13 ganglioside ganglioside NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 GD3 GD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 19 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 22 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 30 blood blood NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2585 # text = In this study, we have investigated the mechanisms by which the R24 mAb affects T cell functions. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 R24 R24 PROPN NNP Number=Sing _ _ _ _ 14 mAb mAb PROPN NNP Number=Sing _ _ _ _ 15 affects affect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 T t NUM CD NumType=Card _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 functions function NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2586 # text = We have observed that the R24 mAb stimulates GD3+ T cell proliferation, cytotoxicity, and surface marker expression of IL-2R alpha-chain, IL-2R beta-chain, HLA-DR, CD11a, and CD11c. Additionally, IFN-gamma activity but not IL-1, IL-2, or IL-4 activity was present in culture supernatants 72 h after R24 stimulation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 R24 R24 PROPN NNP Number=Sing _ _ _ _ 7 mAb mAb PROPN NNP Number=Sing _ _ _ _ 8 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 GD3 GD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 + + SYM SYM _ _ _ _ _ 11 T t NUM CD NumType=Card _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 cytotoxicity cytotoxicity NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 surface surface NOUN NN Number=Sing _ _ _ _ 19 marker marker NOUN NN Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2R 2R PROPN NNP Number=Sing _ _ _ _ 25 alpha-chain alpha-chain NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 2R 2R NOUN NN Number=Sing _ _ _ _ 30 beta- beta- PUNCT : _ _ _ _ SpaceAfter=No 31 chain chain NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 HLA-DR HLA-DR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 CD11a CD11a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 CD C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 11c 11c PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ 41 Additionally additionally ADV RB _ _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 IFN IFN ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 gamma gamma NOUN NN Number=Sing _ _ _ _ 46 activity activity NOUN NN Number=Sing _ _ _ _ 47 but but CCONJ CC _ _ _ _ _ 48 not not PART RB _ _ _ _ _ 49 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 56 , , PUNCT , _ _ _ _ _ 57 or or CCONJ CC _ _ _ _ _ 58 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 59 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 60 4 4 NUM CD NumType=Card _ _ _ _ 61 activity activity NOUN NN Number=Sing _ _ _ _ 62 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 63 present present ADJ JJ Degree=Pos _ _ _ _ 64 in in ADP IN _ _ _ _ _ 65 culture culture NOUN NN Number=Sing _ _ _ _ 66 supernatants supernatant NOUN NNS Number=Plur _ _ _ _ 67 72 72 NUM CD NumType=Card _ _ _ _ 68 h h NOUN NN Number=Sing _ _ _ _ 69 after after ADP IN _ _ _ _ _ 70 R24 R24 NUM CD NumType=Card _ _ _ _ 71 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 72 . . PUNCT . _ _ _ _ _ # sent_id = 2587 # text = In some donors, increased IL-6 and TNF-alpha activity also was detected after R24 treatment. 1 In in ADP IN _ _ _ _ _ 2 some some DET DT _ _ _ _ _ 3 donors donor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 6 6 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 alpha alpha NOUN NN Number=Sing _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 after after ADP IN _ _ _ _ _ 18 R24 R24 NUM CD NumType=Card _ _ _ _ 19 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2588 # text = Furthermore, R24 treatment resulted in translocation of c-rel, but little or no NF kappa B p50 or p65, from the cytoplasm to the nucleus and an increase of NF kappa B binding complexes containing c-rel and p50. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 R24 R24 NUM CD NumType=Card _ _ _ _ 4 treatment treatment NOUN NN Number=Sing _ _ _ _ 5 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 translocation translocation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 c- c- SYM NFP _ _ _ _ SpaceAfter=No 10 rel rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 little little ADJ JJ Degree=Pos _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 no no DET DT _ _ _ _ _ 16 NF Nf PROPN NNP Number=Sing _ _ _ _ 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B b PROPN NNP Number=Sing _ _ _ _ 19 p50 p50 NUM CD NumType=Card _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 increase increase NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 NF NF PROPN NNP Number=Sing _ _ _ _ 34 kappa kappa PROPN NNP Number=Sing _ _ _ _ 35 B b PROPN NNP Number=Sing _ _ _ _ 36 binding binding VERB VBG VerbForm=Ger _ _ _ _ 37 complexes complex NOUN NNS Number=Plur _ _ _ _ 38 containing contain VERB VBG VerbForm=Ger _ _ _ _ 39 c- c- SYM NFP _ _ _ _ SpaceAfter=No 40 rel rel NOUN NN Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 2589 # text = This treatment also caused increased tyrosine phosphorylation of specific protein substrates. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 treatment treatment NOUN NN Number=Sing _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 7 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 substrates substrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 2590 # text = R24-stimulated increases in proliferation, cytotoxicity, and cell surface protein expression could be blocked by cyclosporin and staurosporin, indicating that cyclophilin/calcineurin and protein kinase C may be involved in the R24 signaling pathway. 1 R24 R24 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 -stimulated -stimulate ADJ JJ Degree=Pos _ _ _ _ 3 increases increase NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 cytotoxicity cytotoxicity NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 cell cell VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 11 surface surface NOUN NN Number=Sing _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 could could AUX MD VerbForm=Fin _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 staurosporin staurosporin NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 23 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 24 cyclophilin cyclophilin NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 / / PUNCT , _ _ _ _ SpaceAfter=No 26 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 protein protein NOUN NN Number=Sing _ _ _ _ 29 kinase kinase NOUN NN Number=Sing _ _ _ _ 30 C c PROPN NNP Number=Sing _ _ _ _ 31 may may AUX MD VerbForm=Fin _ _ _ _ 32 be be AUX VB VerbForm=Inf _ _ _ _ 33 involved involved ADJ JJ Degree=Pos _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 R24 R24 PROPN NNP Number=Sing _ _ _ _ 37 signaling signaling NOUN NN Number=Sing _ _ _ _ 38 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 2591 # text = Additionally, herbimycin A, a tyrosine kinase inhibitor, blocked the R24-stimulated increase in proliferation but not cytotoxicity at concentrations consistent with specificity for tyrosine kinases. 1 Additionally additionally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 herbimycin herbimycin ADP IN _ _ _ _ _ 4 A a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 8 kinase kinase NOUN NN Number=Sing _ _ _ _ 9 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 R24 R24 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 -stimulated -stimulated VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 increase increase NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 18 but but CCONJ CC _ _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 cytotoxicity cytotoxicity NOUN NN Number=Sing _ _ _ _ 21 at at ADP IN _ _ _ _ _ 22 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 23 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 specificity specificity NOUN NN Number=Sing _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 28 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2592 # text = These results suggest that multiple biochemical pathways are involved in the activation of human T cells by R24. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 6 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 7 pathways pathway NOUN NNS Number=Plur _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 involved involved ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 R24 R24 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2593 # text = Document 003003272 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003272 003003272 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2594 # text = Nuclear NF-ATp is a hallmark of unstimulated B cells from B-CLL patients. 1 Nuclear nuclear PROPN NNP Number=Sing _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 ATp ATp PROPN NNP Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 hallmark hallmark NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 10 B b ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 CLL CLL PROPN NNP Number=Sing _ _ _ _ 16 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2595 # text = B lymphocytes from the peripheral blood of patients with chronic lymphocytic leukaemia (CLL) were analysed for the nuclear presence and DNA binding of a panel of transcription factors which are involved in the gene control of lymphoid cells. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 6 blood blood NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 patients patient NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 11 lymphocytic lymphocytic ADJ JJ Degree=Pos _ _ _ _ 12 leukaemia leukaemia NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 CLL Cll NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 analysed analyse VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 presence presence NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 DNA dna NOUN NN Number=Sing _ _ _ _ 24 binding binding VERB VBG VerbForm=Ger _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 panel panel NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 factors factor NOUN NNS Number=Plur _ _ _ _ 31 which which PRON WDT PronType=Rel _ _ _ _ 32 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 involved involved ADJ JJ Degree=Pos _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 gene gene NOUN NN Number=Sing _ _ _ _ 37 control control NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 2596 # text = The following transcription factors were studied: the Octamer factors Oct-1 and Oct-2, members of the AP-1 factor family, NF-AT factors, in particular NF-ATp, and members of the Rel/NF-kB family. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 following follow VERB VBG VerbForm=Ger _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factors factor NOUN NNS Number=Plur _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 7 : : PUNCT : _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 Octamer Octamer PROPN NNP Number=Sing _ _ _ _ 10 factors factor VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 -2 -2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 members member NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 AT at NOUN NN Number=Sing _ _ _ _ 30 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 particular particular ADJ JJ Degree=Pos _ _ _ _ 34 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 ATp ATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 members member NOUN NNS Number=Plur _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 Rel/ Rel/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 kB kb PROPN NNP Number=Sing _ _ _ _ 46 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 2597 # text = We show that the constitutive nuclear translocation of NF-ATp, a member of the growing family of NF-AT factors, is a hallmark of nonstimulated B cells from CLL patients that distinguishes B-CLL cells from 'normal' B lymphocytes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 translocation translocation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 ATp ATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 member member NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 growing grow VERB VBG VerbForm=Ger _ _ _ _ 18 family family NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 AT AT ADP IN _ _ _ _ _ 23 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 hallmark hallmark NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 nonstimulated nonstimulate ADJ JJ Degree=Pos _ _ _ _ 30 B b ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 from from ADP IN _ _ _ _ _ 33 CLL CLL DET DT _ _ _ _ _ 34 patients patient NOUN NNS Number=Plur _ _ _ _ 35 that that PRON WDT PronType=Rel _ _ _ _ 36 distinguishes distinguish VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 CLL Cll NOUN NN Number=Sing _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ _ 41 from from ADP IN _ _ _ _ _ 42 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 43 normal normal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 44 ' ' PUNCT '' _ _ _ _ _ 45 B b NOUN NN Number=Sing _ _ _ _ 46 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 2598 # text = Constitutive nuclear appearance was also observed for NF-kB2/p52. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 appearance appearance NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 NF- NF- SYM NFP _ _ _ _ SpaceAfter=No 9 kB2/ kB2/ SYM SYM _ _ _ _ SpaceAfter=No 10 p52 p52 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 2599 # text = Constitutive binding of further factor proteins to DNA, such as JunD, c-Fos and FosB, was detected in several patients whereas the localisation and DNA binding of other factors such as c-Jun, RelA/p65 and c-Rel was unaltered. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 binding binding NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 further further ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 proteins protein NOUN NNS Number=Plur _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 DNA Dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 such such ADJ JJ Degree=Pos _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 JunD JunD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 c- c- SYM NFP _ _ _ _ SpaceAfter=No 15 Fos Fos PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 FosB FosB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 several several ADJ JJ Degree=Pos _ _ _ _ 23 patients patient NOUN NNS Number=Plur _ _ _ _ 24 whereas whereas SCONJ IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 localisation localisation NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 DNA dna NOUN NN Number=Sing _ _ _ _ 29 binding binding VERB VBG VerbForm=Ger _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 other other ADJ JJ Degree=Pos _ _ _ _ 32 factors factor NOUN NNS Number=Plur _ _ _ _ 33 such such ADJ JJ Degree=Pos _ _ _ _ 34 as as ADP IN _ _ _ _ _ 35 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT , _ _ _ _ SpaceAfter=No 37 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 RelA RelA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 / / PUNCT , _ _ _ _ SpaceAfter=No 41 p65 p65 NOUN NN Number=Sing _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 Rel Rel NOUN NN Number=Sing _ _ _ _ 46 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 47 unaltered unalter ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 2600 # text = It is remarkable that in B-CLL cells the nuclear appearance and DNA binding of specific transcription factors is dramatically affected whereas other members of the same factor family remained unaltered in these leukemic cells. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 remarkable remarkable ADJ JJ Degree=Pos _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 CLL CLL PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 appearance appearance NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 DNA dna NOUN NN Number=Sing _ _ _ _ 15 binding binding VERB VBG VerbForm=Ger _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factors factor NOUN NNS Number=Plur _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 dramatically dramatically ADV RB _ _ _ _ _ 22 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 whereas wherea NOUN NNS Number=Plur _ _ _ _ 24 other other ADJ JJ Degree=Pos _ _ _ _ 25 members member NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 same same ADJ JJ Degree=Pos _ _ _ _ 29 factor factor NOUN NN Number=Sing _ _ _ _ 30 family family NOUN NN Number=Sing _ _ _ _ 31 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 unaltered unaltered ADJ JJ Degree=Pos _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 35 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 2601 # text = It remains to be shown which molecular events lead to the specific 'pre-activation', i.e. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 be be AUX VB VerbForm=Inf _ _ _ _ 5 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 which which DET WDT PronType=Int _ _ _ _ 7 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 8 events event NOUN NNS Number=Plur _ _ _ _ 9 lead lead VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 14 pre-activation pre-activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 i.e. i.e. X FW _ _ _ _ _ # sent_id = 2602 # text = constitutive nuclear translocation and DNA binding, of these members of NF-AT, NF-kB and AP-1 factor families. 1 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 translocation translocation NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 DNA dna NOUN NN Number=Sing _ _ _ _ 6 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 10 members member NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kB kb PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ _ 24 families family NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2603 # text = Document 003003277 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003277 003003277 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2604 # text = MDS1/EVI1 enhances TGF-beta1 signaling and strengthens its growth-inhibitory effect but the leukemia-associated fusion protein AML1/MDS1/EVI1, product of the t(3;21), abrogates growth-inhibition in response to TGF-beta1. 1 MDS1/EVI1 MDS1/EVI1 NUM CD NumType=Card _ _ _ _ 2 enhances enhance NOUN NNS Number=Plur _ _ _ _ 3 TGF TGF NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 beta1 beta1 NOUN NN Number=Sing _ _ _ _ 6 signaling signaling NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 strengthens strengthen VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 10 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 13 effect effect NOUN NN Number=Sing _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 fusion fusion NOUN NN Number=Sing _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 AML1/MDS1/EVI1 Aml1/mds1/evi1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 product product NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 t t NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 3;21 3;21 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 abrogates abrogate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 -inhibition -inhibition NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 response response NOUN NN Number=Sing _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 beta1 beta1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2605 # text = MDS1/EVI1, located on chromosome 3 band q26, encodes a zinc-finger DNA-binding transcription activator not detected in normal hematopoietic cells but expressed in several normal tissues. 1 MDS1/EVI1 MDS1/EVI1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 6 3 3 NUM CD NumType=Card _ _ _ _ 7 band band NOUN NN Number=Sing _ _ _ _ 8 q26 q26 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 zinc zinc NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 finger finger NOUN NN Number=Sing _ _ _ _ 15 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 activator activator NOUN NN Number=Sing _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 detected detect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 normal normal ADJ JJ Degree=Pos _ _ _ _ 24 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 but but CCONJ CC _ _ _ _ _ 27 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 several several ADJ JJ Degree=Pos _ _ _ _ 30 normal normal ADJ JJ Degree=Pos _ _ _ _ 31 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2606 # text = MDS1/EVI1 is inappropriately activated in myeloid leukemias following chromosomal rearrangements involving band 3q26. 1 MDS1/EVI1 Mds1/evi1 NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 inappropriately inappropriately ADV RB _ _ _ _ _ 4 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 7 leukemias leukemia NOUN NNS Number=Plur _ _ _ _ 8 following follow VERB VBG VerbForm=Ger _ _ _ _ 9 chromosomal chromosomal ADJ JJ Degree=Pos _ _ _ _ 10 rearrangements rearrangement NOUN NNS Number=Plur _ _ _ _ 11 involving involve VERB VBG VerbForm=Ger _ _ _ _ 12 band band NOUN NN Number=Sing _ _ _ _ 13 3q 3q NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 26 26 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 2607 # text = The rearrangements lead either to gene truncation, and to expression of the transcription repressor EVI1, as seen in the t(3;3)(q21;q26) and inv(3)(q21q26), or to gene fusion, as seen in the t(3;21)(q26;q22) which results in the fusion protein AML1/MDS1/EVI1. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 rearrangements rearrangement NOUN NNS Number=Plur _ _ _ _ 3 lead lead VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 either either ADV RB _ _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 gene gene VERB VB VerbForm=Inf _ _ _ _ 7 truncation truncation NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 repressor repressor NOUN NN Number=Sing _ _ _ _ 16 EVI1 EVI1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 as as SCONJ IN _ _ _ _ _ 19 seen see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 t t NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 3;3) 3;3) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 q21;q26 q21;q26 X LS _ _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 inv inv NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 3) 3) SYM NFP _ _ _ _ SpaceAfter=No 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 q21q26 q21q26 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 or or CCONJ CC _ _ _ _ _ 37 to to PART TO _ _ _ _ _ 38 gene gene VERB VB VerbForm=Inf _ _ _ _ 39 fusion fusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 as as SCONJ IN _ _ _ _ _ 42 seen see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 t( t( SYM NFP _ _ _ _ SpaceAfter=No 46 3;21 3;21 NUM CD NumType=Card _ _ _ SpaceAfter=No 47 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 q26;q22 q26;q22 X LS _ _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ _ 51 which which DET WDT PronType=Int _ _ _ _ 52 results result NOUN NNS Number=Plur _ _ _ _ 53 in in ADP IN _ _ _ _ _ 54 the the DET DT Definite=Def|PronType=Art _ _ _ _ 55 fusion fusion NOUN NN Number=Sing _ _ _ _ 56 protein protein NOUN NN Number=Sing _ _ _ _ 57 AML1/MDS1/EVI1 AML1/MDS1/EVI1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 2608 # text = This fusion protein contains the DNA-binding domain of the transcription factor AML1 fused in-frame to the entire MDS1/EVI1 with the exclusion of its first 12 amino acids. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 fusion fusion NOUN NN Number=Sing _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 domain domain NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 AML1 Aml1 NOUN NN Number=Sing _ _ _ _ 15 fused fuse VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 in in ADP IN _ _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 frame frame NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 entire entire ADJ JJ Degree=Pos _ _ _ _ 22 MDS1/EVI1 Mds1/evi1 NOUN NN Number=Sing _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 exclusion exclusion NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 28 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 29 12 12 NUM CD NumType=Card _ _ _ _ 30 amino amino NOUN NN Number=Sing _ _ _ _ 31 acids acid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2609 # text = In this report, we have analyzed the response of the hematopoietic precursor cell line 32Dcl3, expressing either the normal protein MDS1/EVI1 or the fusion protein AML1/MDS1/EVI1, to factors that control cell differentiation or cell replication. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 response response NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 13 precursor precursor NOUN NN Number=Sing _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 line line NOUN NN Number=Sing _ _ _ _ 16 32 32 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 Dcl3 Dcl3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 20 either either CCONJ CC _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 normal normal ADJ JJ Degree=Pos _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ _ 24 MDS1/EVI1 Mds1/evi1 NOUN NN Number=Sing _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 fusion fusion NOUN NN Number=Sing _ _ _ _ 28 protein protein NOUN NN Number=Sing _ _ _ _ 29 AML1/MDS1/EVI1 AML1/MDS1/EVI1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 factors factor NOUN NNS Number=Plur _ _ _ _ 33 that that PRON WDT PronType=Rel _ _ _ _ 34 control control VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ _ 36 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 37 or or CCONJ CC _ _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 2610 # text = The 32Dcl3 cells are IL-3-dependent for growth and they differentiate into granulocytes when exposed to G-CSF. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 32 32 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 Dcl3 Dcl3 NOUN NN Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 growth growth NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 15 differentiate differentiate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 into into ADP IN _ _ _ _ _ 17 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ _ 18 when when ADV WRB PronType=Int _ _ _ _ 19 exposed expose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 G- G- PUNCT NFP _ _ _ _ SpaceAfter=No 22 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2611 # text = They are growth-inhibited by TGF-beta1. 1 They they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 beta1 beta1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 2612 # text = We show that whereas the expression of MDS1/EVI1 has no effect on granulocytic differentiation induced by G-CSF, expression of AML1/MDS1/EVI1 blocks differentiation resulting in cell death. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 whereas whereas SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 MDS MDS NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 EVI1 Evi1 PROPN NNP Number=Sing _ _ _ _ 12 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 no no DET DT _ _ _ _ _ 14 effect effect NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 17 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 18 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 G- G- NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 CSF CSF NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 AML1/MDS1/EVI1 AML1/MDS1/EVI1 NUM CD NumType=Card _ _ _ _ 26 blocks block NOUN NNS Number=Plur _ _ _ _ 27 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 28 resulting result VERB VBG VerbForm=Ger _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2613 # text = This effect is similar to that previously described by others for 32Dcl3 cells that express transgenic Evil. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 similar similar ADJ JJ Degree=Pos _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 7 previously previously ADV RB _ _ _ _ _ 8 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 others other NOUN NNS Number=Plur _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 32 32 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 Dcl3 Dcl3 NUM CD NumType=Card _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 18 Evil evil PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2614 # text = Furthermore, we show that whereas the expression of the fusion protein AML1/MDS1/EVI1 completely abrogates the growth-inhibitory effect of TGF-beta1 and allows 32Dcl3 cells to proliferate, expression of the normal protein MDS1/EVI1 has the opposite effect, and it strengthens the response of cells to the growth-inhibitory effect of TGF-beta1. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 whereas whereas SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 fusion fusion NOUN NN Number=Sing _ _ _ _ 12 protein protein ADV WRB PronType=Rel _ _ _ _ 13 AML1/MDS1/EVI1 AML1/MDS1/EVI1 PROPN NNP Number=Sing _ _ _ _ 14 completely completely ADV RB _ _ _ _ _ 15 abrogates abrogate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 20 effect effect NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 beta1 beta1 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 allows allow VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 32 32 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 Dcl3 Dcl3 NUM CD NumType=Card _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 to to PART TO _ _ _ _ _ 31 proliferate proliferate VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 expression expression NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 normal normal ADJ JJ Degree=Pos _ _ _ _ 37 protein protein NOUN NN Number=Sing _ _ _ _ 38 MDS mds NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 / / PUNCT , _ _ _ _ SpaceAfter=No 41 EVI1 EVI1 PROPN NNP Number=Sing _ _ _ _ 42 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 opposite opposite ADJ JJ Degree=Pos _ _ _ _ 45 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 49 strengthens strengthen VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 response response NOUN NN Number=Sing _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 cells cell NOUN NNS Number=Plur _ _ _ _ 54 to to ADP IN _ _ _ _ _ 55 the the DET DT Definite=Def|PronType=Art _ _ _ _ 56 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 59 effect effect NOUN NN Number=Sing _ _ _ _ 60 of of ADP IN _ _ _ _ _ 61 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 62 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 63 beta1 beta1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 64 . . PUNCT . _ _ _ _ _ # sent_id = 2615 # text = By using the yeast two-hybrid system, we also show that EVI1 (contained in its entirety in MDS1/EVI1 and AML1/MDS1/EVI1) physically interacts with SMAD3, which is an intracellular mediator of TGF-beta1 signaling. 1 By by SCONJ IN _ _ _ _ _ 2 using use VERB VBG VerbForm=Ger _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 yeast yeast ADJ JJS Degree=Sup _ _ _ _ 5 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 hybrid hybrid NOUN NN Number=Sing _ _ _ _ 8 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 also also ADV RB _ _ _ _ _ 12 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 EVI1 EVI1 PROPN NNP Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 entirety entirety NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 MDS1/EVI1 Mds1/evi1 PROPN NNP Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 AML1/MDS1/EVI1 Aml1/mds1/evi1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 physically physically ADV RB _ _ _ _ _ 26 interacts interact NOUN NNS Number=Plur _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 SMAD3 SMAD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 which which PRON WDT PronType=Rel _ _ _ _ 31 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 34 mediator mediator NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 beta1 beta1 NUM CD NumType=Card _ _ _ _ 39 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 2616 # text = Finally, we have correlated the response of the cells to G-CSF or TGF-beta1 with the ability of the normal and fusion proteins to activate or repress promoters which they can directly regulate by binding to the promoter site. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 response response NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 G- G- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 CSF CSF NOUN NN Number=Sing _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 TGF TGF NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 beta1 beta1 NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 ability ability NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 normal normal ADJ JJ Degree=Pos _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 fusion fusion NOUN NN Number=Sing _ _ _ _ 26 proteins protein NOUN NNS Number=Plur _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 activate activate VERB VB VerbForm=Inf _ _ _ _ 29 or or CCONJ CC _ _ _ _ _ 30 repress repress VERB VB VerbForm=Inf _ _ _ _ 31 promoters promoter NOUN NNS Number=Plur _ _ _ _ 32 which which PRON WDT PronType=Rel _ _ _ _ 33 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 34 can can AUX MD VerbForm=Fin _ _ _ _ 35 directly directly ADV RB _ _ _ _ _ 36 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 37 by by SCONJ IN _ _ _ _ _ 38 binding bind VERB VBG VerbForm=Ger _ _ _ _ 39 to to ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 promoter promoter NOUN NN Number=Sing _ _ _ _ 42 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 2617 # text = We propose that mutations of MDS1/EVI1 either by gene truncation resulting in the transcription repressor EVI1 or by gene fusion to AML1 lead to an altered cellular response to growth and differentiation factors that could result in leukemic transformation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 mutations mutation NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 MDS1 MDS1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 EVI1 EVI1 PROPN NNP Number=Sing _ _ _ _ 9 either either CCONJ CC _ _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 truncation truncation NOUN NN Number=Sing _ _ _ _ 13 resulting result VERB VBG VerbForm=Ger _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 repressor repressor NOUN NN Number=Sing _ _ _ _ 18 EVI1 EVI1 PROPN NNP Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 gene gene ADJ JJ Degree=Pos _ _ _ _ 22 fusion fusion NOUN NN Number=Sing _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 AML1 AML1 NUM CD NumType=Card _ _ _ _ 25 lead lead NOUN NN Number=Sing _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 altered alter VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 30 response response NOUN NN Number=Sing _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 growth growth NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 35 factors factor NOUN NNS Number=Plur _ _ _ _ 36 that that PRON WDT PronType=Rel _ _ _ _ 37 could could AUX MD VerbForm=Fin _ _ _ _ 38 result result VERB VB VerbForm=Inf _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 41 transformation transformation NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 2618 # text = The different response of myeloid cells ectopically expressing the normal or the fusion protein to G-CSF and TGF-beta1 could depend on the different transactivation properties of these proteins resulting in divergent expression of downstream genes regulated by the two proteins. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 different different ADJ JJ Degree=Pos _ _ _ _ 3 response response NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 ectopically ectopically ADV RB _ _ _ _ _ 8 expressing express VERB VBG VerbForm=Ger _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 normal normal ADJ JJ Degree=Pos _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 fusion fusion NOUN NN Number=Sing _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 G- G- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 CSF CSF NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 TGF TGF NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 beta1 beta1 NOUN NN Number=Sing _ _ _ _ 22 could could AUX MD VerbForm=Fin _ _ _ _ 23 depend depend VERB VB VerbForm=Inf _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 different different ADJ JJ Degree=Pos _ _ _ _ 27 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 28 properties property NOUN NNS Number=Plur _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 31 proteins protein NOUN NNS Number=Plur _ _ _ _ 32 resulting result VERB VBG VerbForm=Ger _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 divergent divergent ADJ JJ Degree=Pos _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 38 genes gene NOUN NNS Number=Plur _ _ _ _ 39 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 by by ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 two two NUM CD NumType=Card _ _ _ _ 43 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2619 # text = Document 003003280 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003280 003003280 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2620 # text = [Glucocorticoid receptors in peripheral blood lymphocytes of patients with bronchial asthma] Quantitation of glucocorticoid receptors (GCR) and the study of their affinity for glucocorticosteroids (GCS) were made in peripheral blood lymphocytes of bronchial asthma (BA) patients in consideration of GCR treatment and serum levels of endogenous cortisol. 1 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 Glucocorticoid Glucocorticoid VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 3 receptors receptor NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 6 blood blood NOUN NN Number=Sing _ _ _ _ 7 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 patients patient NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 bronchial bronchial ADJ JJ Degree=Pos _ _ _ _ 12 asthma asthma NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n 14 Quantitation Quantitation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 17 receptors receptor NOUN NNS Number=Plur _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 GCR GCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 study study NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 26 affinity affinity NOUN NN Number=Sing _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 glucocorticosteroids glucocorticosteroid NOUN NNS Number=Plur _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 GCS Gc NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 33 made make VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 36 blood blood NOUN NN Number=Sing _ _ _ _ 37 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 bronchial bronchial ADJ JJ Degree=Pos _ _ _ _ 40 asthma asthma NOUN NN Number=Sing _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 BA BA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ _ 44 patients patient NOUN NNS Number=Plur _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 consideration consideration NOUN NN Number=Sing _ _ _ _ 47 of of ADP IN _ _ _ _ _ 48 GCR Gcr ADJ JJ Degree=Pos _ _ _ _ 49 treatment treatment NOUN NN Number=Sing _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 serum serum NOUN NN Number=Sing _ _ _ _ 52 levels level NOUN NNS Number=Plur _ _ _ _ 53 of of ADP IN _ _ _ _ _ 54 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 55 cortisol cortisol NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 2621 # text = It is stated that GCR of healthy controls and GCS-untreated patients outnumbered those of cortisol-dependent BA patients on hormone therapy. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 stated state VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 GCR Gcr ADP IN _ _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 8 controls control NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 GCS Gc NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 untreated untreate ADJ JJ Degree=Pos _ _ _ _ 13 patients patient NOUN NNS Number=Plur _ _ _ _ 14 outnumbered outnumber VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 cortisol cortisol NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 20 BA Ba NOUN NN Number=Sing _ _ _ _ 21 patients patient NOUN NNS Number=Plur _ _ _ _ 22 on on ADP IN _ _ _ _ _ 23 hormone hormone NOUN NN Number=Sing _ _ _ _ 24 therapy therapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2622 # text = Following discontinuation of glucocorticoid drugs GCR count in cortisol-dependent BA tends to rise. 1 Following follow VERB VBG VerbForm=Ger _ _ _ _ 2 discontinuation discontinuation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 5 drugs drug NOUN NNS Number=Plur _ _ _ _ 6 GCR Gcr ADP IN _ _ _ _ _ 7 count count NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 cortisol cortisol ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 BA Ba NOUN NN Number=Sing _ _ _ _ 13 tends tend VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 rise rise VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2623 # text = Endogenous cortisol has no effect on GCR level estimated by 3H-triamcinolone acetonide. 1 Endogenous Endogenous ADJ JJ Degree=Pos _ _ _ _ 2 cortisol cortisol NOUN NN Number=Sing _ _ _ _ 3 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 no no DET DT _ _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 GCR Gcr ADJ JJ Degree=Pos _ _ _ _ 8 level level NOUN NN Number=Sing _ _ _ _ 9 estimated estimate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 3H 3h PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 triamcinolone triamcinolone ADJ JJ Degree=Pos _ _ _ _ 14 acetonide acetonide NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2624 # text = Document 003003282 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003282 003003282 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2625 # text = Does activation of the TAL1 gene occur in a majority of patients with T-cell acute lymphoblastic leukemia? 1 Does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 TAL1 tAL1 NUM CD NumType=Card _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 occur occur NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 majority majority NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 patients patient NOUN NNS Number=Plur _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 acute acute X ADD _ _ _ _ _ 17 lymphoblastic lymphoblastic ADJ JJ Degree=Pos _ _ _ _ 18 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ? ? PUNCT . _ _ _ _ _ # sent_id = 2626 # text = A pediatric oncology group study. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 pediatric pediatric ADJ JJ Degree=Pos _ _ _ _ 3 oncology oncology NOUN NN Number=Sing _ _ _ _ 4 group group NOUN NN Number=Sing _ _ _ _ 5 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2627 # text = Almost 25% of patients with T-cell acute lymphoblastic leukemia (T-ALL) have tumor-specific rearrangements of the TAL1 gene. 1 Almost almost ADV RB _ _ _ _ _ 2 25 25 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 % % SYM NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 patients patient NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 acute acute ADJ JJ Degree=Pos _ _ _ _ 10 lymphoblastic lymphoblastic ADJ JJ Degree=Pos _ _ _ _ 11 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 T t PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 ALL all ADV RB _ _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 tumor- tumor- SYM NFP _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 rearrangements rearrangement NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 TAL1 tAL1 NOUN NN Number=Sing _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2628 # text = Although TAL1 expression has not been observed in normal lymphocytes, TAL1 gene products are readily detected in leukemic cells that harbor a rearranged TAL1 allele. 1 Although although SCONJ IN _ _ _ _ _ 2 TAL1 TAL1 NUM CD NumType=Card _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 7 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 normal normal ADJ JJ Degree=Pos _ _ _ _ 10 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 TAL1 TAL1 NUM CD NumType=Card _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 products product NOUN NNS Number=Plur _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 readily readily ADV RB _ _ _ _ _ 17 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 that that PRON WDT PronType=Rel _ _ _ _ 22 harbor harbor VERB VB VerbForm=Inf _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 rearranged rearrange VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 TAL1 tAL1 NOUN NN Number=Sing _ _ _ _ 26 allele allele NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2629 # text = Hence, it has been proposed that ectopic expression of TAL1 promotes the development of T-ALL. 1 Hence hence ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 4 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 6 proposed propose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 ectopic ectopic ADJ JJ Degree=Pos _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 TAL1 TAL1 NUM CD NumType=Card _ _ _ _ 12 promotes promote VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 development development NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ALL all ADV RB _ _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2630 # text = In this report, we show that TAL1 is expressed in the leukemic cells of most patients with T-ALL, including many that do not display an apparent TAL1 gene alteration. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 TAL1 TAL1 PROPN NNP Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 most most ADJ JJS Degree=Sup _ _ _ _ 17 patients patient NOUN NNS Number=Plur _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 ALL all ADV RB _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 including include VERB VBG VerbForm=Ger _ _ _ _ 24 many many ADJ JJ Degree=Pos _ _ _ _ 25 that that PRON WDT PronType=Rel _ _ _ _ 26 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 not not PART RB _ _ _ _ _ 28 display display VERB VB VerbForm=Inf _ _ _ _ 29 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 apparent apparent ADJ JJ Degree=Pos _ _ _ _ 31 TAL1 tAL1 NOUN NN Number=Sing _ _ _ _ 32 gene gene NOUN NN Number=Sing _ _ _ _ 33 alteration alteration NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2631 # text = A polymorphic dinucleotide repeat in the transcribed sequences of TAL1 was used to determine the allele specificity of TAL1 transcription in primary T-ALL cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 polymorphic polymorphic ADJ JJ Degree=Pos _ _ _ _ 3 dinucleotide dinucleotide NOUN NN Number=Sing _ _ _ _ 4 repeat repeat VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 sequences sequence NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 TAL1 tAL1 PROPN NNP Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 determine determine VERB VB VerbForm=Inf _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 allele allele NOUN NN Number=Sing _ _ _ _ 17 specificity specificity NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 TAL1 TAL1 NUM CD NumType=Card _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 primary primary ADJ JJ Degree=Pos _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 ALL all DET DT _ _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2632 # text = Monoallelic expression of TAL1 was observed in the leukemic cells of all patients (8 of 8) bearing a TAL1 gene rearrangement. 1 Monoallelic Monoallelic ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 TAL1 tAL1 PROPN NNP Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 all all DET DT _ _ _ _ _ 13 patients patient NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 8 8 NUM CD NumType=Card _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 8 8 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 bearing bear VERB VBG VerbForm=Ger _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 TAL1 TAL1 NUM CD NumType=Card _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 rearrangement rearrangement NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2633 # text = In the leukemic cells of patients without detectable TAL1 rearrangements, TAL1 transcription occurred in either a monoallelic (3 of 7 patients) or a biallelic (4 of 7 patients) fashion. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 patients patient NOUN NNS Number=Plur _ _ _ _ 7 without without ADP IN _ _ _ _ _ 8 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 9 TAL1 tAL1 NUM CD NumType=Card _ _ _ _ 10 rearrangements rearrangement NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 TAL1 TAL1 NUM CD NumType=Card _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 either either CCONJ CC _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 monoallelic monoallelic NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 3 3 NUM CD NumType=Card _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 7 7 NUM CD NumType=Card _ _ _ _ 23 patients patient NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 biallelic biallelic NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 4 4 NUM CD NumType=Card _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 7 7 NUM CD NumType=Card _ _ _ _ 32 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 fashion fashion NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 2634 # text = Thus, TAL1 activation in these patients may result from subtle alterations in cis-acting regulatory sequences (affecting expression of a single TAL1 allele) or changes in trans-acting factors that control TAL1 transcription (affecting expression of both TAL1 alleles). 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 TAL1 TAL1 NUM CD NumType=Card _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 patients patient NOUN NNS Number=Plur _ _ _ _ 8 may may AUX MD VerbForm=Fin _ _ _ _ 9 result result VERB VB VerbForm=Inf _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 subtle subtle ADJ JJ Degree=Pos _ _ _ _ 12 alterations alteration NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 acting act VERB VBG VerbForm=Ger _ _ _ _ 17 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 18 sequences sequence NOUN NNS Number=Plur _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 affecting affect VERB VBG VerbForm=Ger _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 single single ADJ JJ Degree=Pos _ _ _ _ 25 TAL1 tAL1 NOUN NN Number=Sing _ _ _ _ 26 allele allele NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 changes change NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 acting act VERB VBG VerbForm=Ger _ _ _ _ 34 factors factor NOUN NNS Number=Plur _ _ _ _ 35 that that PRON WDT PronType=Rel _ _ _ _ 36 control control VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 37 TAL1 TAL1 NUM CD NumType=Card _ _ _ _ 38 transcription transcription NOUN NN Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 affecting affect VERB VBG VerbForm=Ger _ _ _ _ 41 expression expression NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 both both DET DT _ _ _ _ _ 44 TAL1 TAL1 NUM CD NumType=Card _ _ _ _ 45 alleles allele NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2635 # text = Document 003003283 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003283 003003283 NUM CD NumType=Card _ _ _ _ 3 ends. ends. NOUN NN Number=Sing _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2636 # text = BCL-6 and the molecular pathogenesis of B-cell lymphoma. 1 BCL BCL INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 6 6 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 7 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 lymphoma lymphoma NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2637 # text = The results presented identify the first genetic lesion associated with DLCL, the most clinically relevant form of NHL. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 presented present VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 identify identify VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 first first ADV RBS _ _ _ _ _ 7 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 8 lesion lesion NOUN NN Number=Sing _ _ _ _ 9 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 DLCL DLCL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 most most ADV RBS _ _ _ _ _ 15 clinically clinically ADV RB _ _ _ _ _ 16 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 17 form form NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 NHL NHL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2638 # text = Although no proof yet exists of a role for these lesions in DLCL pathogenesis, the feature of the BCL-6 gene product, its specific pattern of expression in B cells, and the clustering of lesions disrupting its regulatory domain strongly suggest that deregulation of BCL-6 expression may contribute to DLCL development. 1 Although although SCONJ IN _ _ _ _ _ 2 no no DET DT _ _ _ _ _ 3 proof proof NOUN NN Number=Sing _ _ _ _ 4 yet yet ADV RB _ _ _ _ _ 5 exists exist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 lesions lesion NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 DLCL DLCL PROPN NNP Number=Sing _ _ _ _ 14 pathogenesis pathogenesis PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 feature feature NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 BCL BCL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 6 6 NUM CD NumType=Card _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 product product NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 27 specific specific ADJ JJ Degree=Pos _ _ _ _ 28 pattern pattern NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 B b ADJ JJ Degree=Pos _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 clustering clustering NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 lesions lesion NOUN NNS Number=Plur _ _ _ _ 40 disrupting disrupt VERB VBG VerbForm=Ger _ _ _ _ 41 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 42 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 43 domain domain NOUN NN Number=Sing _ _ _ _ 44 strongly strongly ADV RB _ _ _ _ _ 45 suggest suggest VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 46 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 47 deregulation deregulation NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 BCL BCL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 6 6 NUM CD NumType=Card _ _ _ _ 52 expression expression NOUN NN Number=Sing _ _ _ _ 53 may may AUX MD VerbForm=Fin _ _ _ _ 54 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 55 to to PART TO _ _ _ _ _ 56 DLCL Dlcl VERB VB VerbForm=Inf _ _ _ _ 57 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 2639 # text = A more precise definition of the role of BCL-6 in normal and neoplastic B-cell development is the goal of ongoing study of transgenic mice engineered either to express BCL-6 under heterologous promoters or lacking BCL-6 function due to targeted deletions. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 more more ADV RBR _ _ _ _ _ 3 precise precise ADJ JJ Degree=Pos _ _ _ _ 4 definition definition NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 BCL BCL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 6 6 NUM CD NumType=Card _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 normal normal ADJ JJ Degree=Pos _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 neoplastic neoplastic ADJ JJ Degree=Pos _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 development development NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 goal goal NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 ongoing ongoing ADJ JJ Degree=Pos _ _ _ _ 25 study study NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 28 mice mouse NOUN NNS Number=Plur _ _ _ _ 29 engineered engineer VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 either either ADV RB _ _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 express express VERB VB VerbForm=Inf _ _ _ _ 33 BCL BCL NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 6 6 NUM CD NumType=Card _ _ _ _ 36 under under ADP IN _ _ _ _ _ 37 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 38 promoters promoter NOUN NNS Number=Plur _ _ _ _ 39 or or CCONJ CC _ _ _ _ _ 40 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 41 BCL BCL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 6 6 NUM CD NumType=Card _ _ _ _ 44 function function NOUN NN Number=Sing _ _ _ _ 45 due due ADP IN _ _ _ _ _ 46 to to ADP IN _ _ _ _ _ 47 targeted target VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 48 deletions deletion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 2640 # text = In addition to contributing to the understanding of DLCL pathogenesis, the identification of BCL-6 lesions may have relevant clinical implications. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 to to SCONJ IN _ _ _ _ _ 4 contributing contribute VERB VBG VerbForm=Ger _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 understanding understanding NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 DLCL DLCL PROPN NNP Number=Sing _ _ _ _ 10 pathogenesis pathogenesis PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 identification identification NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 BCL BCL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 6 6 NUM CD NumType=Card _ _ _ _ 18 lesions lesion NOUN NNS Number=Plur _ _ _ _ 19 may may AUX MD VerbForm=Fin _ _ _ _ 20 have have VERB VB VerbForm=Inf _ _ _ _ 21 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 22 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 23 implications implication NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2641 # text = DLCL represent a heterogeneous group of neoplasms which are treated homogeneously despite the fact that only 50% of patients experience long-term disease-free survival (Schneider et al. 1 DLCL DLCL AUX MD VerbForm=Fin _ _ _ _ 2 represent represent VERB VB VerbForm=Inf _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 heterogeneous heterogeneous ADJ JJ Degree=Pos _ _ _ _ 5 group group NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 neoplasms neoplasm NOUN NNS Number=Plur _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 treated treat VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 homogeneously homogeneously ADV RB _ _ _ _ _ 12 despite despite ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 fact fact NOUN NN Number=Sing _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 only only ADV RB _ _ _ _ _ 17 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 % % SYM NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 patients patient NOUN NN Number=Sing _ _ _ _ 21 experience experience NOUN NN Number=Sing _ _ _ _ 22 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 term term NOUN NN Number=Sing _ _ _ _ 25 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 free free ADJ JJ Degree=Pos _ _ _ _ 28 survival survival NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 Schneider Schneider NOUN NN Number=Sing _ _ _ _ 31 et et X FW _ _ _ _ _ 32 al. al. X FW _ _ _ _ _ # sent_id = 2642 # text = 1990). 1 1990 1990 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 3 . . PUNCT . _ _ _ _ _ # sent_id = 2643 # text = The fact that BCL-6 rearrangements identify biologically and clinically distinct subsets of DLCL suggests that these lesions may be useful as markers in selection of differential therapeutic strategies based on different risk groups. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 fact fact NOUN NN Number=Sing _ _ _ _ 3 that that PRON WDT PronType=Rel _ _ _ _ 4 BCL BCL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 6 6 NUM CD NumType=Card _ _ _ _ 7 rearrangements rearrangement NOUN NNS Number=Plur _ _ _ _ 8 identify identify VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 biologically biologically ADV RB _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 clinically clinically ADV RB _ _ _ _ _ 12 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 13 subsets subset NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 DLCL DLCL PROPN NNP Number=Sing _ _ _ _ 16 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 19 lesions lesion NOUN NNS Number=Plur _ _ _ _ 20 may may AUX MD VerbForm=Fin _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 useful useful ADJ JJ Degree=Pos _ _ _ _ 23 as as SCONJ IN _ _ _ _ _ 24 markers marker NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 selection selection NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 differential differential ADJ JJ Degree=Pos _ _ _ _ 29 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 30 strategies strategy NOUN NNS Number=Plur _ _ _ _ 31 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 on on ADP IN _ _ _ _ _ 33 different different ADJ JJ Degree=Pos _ _ _ _ 34 risk risk NOUN NN Number=Sing _ _ _ _ 35 groups group NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 2644 # text = Furthermore, the BCL-6 rearrangements can be used to identify and monitor the malignant clone with sensitive PCR-based techniques. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 BCL BCL NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 6 6 NUM CD NumType=Card _ _ _ _ 7 rearrangements rearrangement NOUN NNS Number=Plur _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 identify identify VERB VB VerbForm=Inf _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 monitor monitor VERB VB VerbForm=Inf _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 malignant malignant ADJ JJ Degree=Pos _ _ _ _ 17 clone clone NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 20 PCR Pcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 techniques technique NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2645 # text = Since clinical remission has been observed in a significant fraction of DLCL cases, these markers may serve as critical tools for sensitive monitoring of minimal residual disease and early diagnosis of relapse (Gribben et al. 1 Since since ADP IN _ _ _ _ _ 2 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 3 remission remission NOUN NN Number=Sing _ _ _ _ 4 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 6 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 significant significant ADJ JJ Degree=Pos _ _ _ _ 10 fraction fraction NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 DLCL Dlcl ADJ JJ Degree=Pos _ _ _ _ 13 cases case NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 16 markers marker NOUN NNS Number=Plur _ _ _ _ 17 may may AUX MD VerbForm=Fin _ _ _ _ 18 serve serve VERB VB VerbForm=Inf _ _ _ _ 19 as as ADP IN _ _ _ _ _ 20 critical critical ADJ JJ Degree=Pos _ _ _ _ 21 tools tool NOUN NNS Number=Plur _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 24 monitoring monitoring NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 27 residual residual ADJ JJ Degree=Pos _ _ _ _ 28 disease disease NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 early early ADJ JJ Degree=Pos _ _ _ _ 31 diagnosis diagnosis NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 relapse relapse NOUN NN Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 Gribben Gribben PROPN NNP Number=Sing _ _ _ _ 36 et et X FW _ _ _ _ _ 37 al. al. X FW _ _ _ _ _ # sent_id = 2646 # text = 1993). 1 1993 1993 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 3 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2647 # text = Document 003003284 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003284 003003284 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2648 # text = Attenuation of gamma interferon-induced tyrosine phosphorylation in mononuclear phagocytes infected with Leishmania donovani: selective inhibition of signaling through Janus kinases and Stat1. 1 Attenuation Attenuation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 gamma gamma NOUN NN Number=Sing _ _ _ _ 4 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 8 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 11 phagocytes phagocyte NOUN NNS Number=Plur _ _ _ _ 12 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 Leishmania Leishmania PROPN NNP Number=Sing _ _ _ _ 15 donovani donovani NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 : : PUNCT : _ _ _ _ _ 17 selective selective ADJ JJ Degree=Pos _ _ _ _ 18 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 19 of of SCONJ IN _ _ _ _ _ 20 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 21 through through ADP IN _ _ _ _ _ 22 Janus Janus PROPN NNP Number=Sing _ _ _ _ 23 kinases kinase NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 Stat1 stat1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2649 # text = The induction of gene transcription in response to gamma interferon is impaired in mononuclear phagocytes infected with Leishmania donovani, and the mechanisms involved are not fully understood. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 response response NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 gamma gamma NOUN NN Number=Sing _ _ _ _ 10 interferon interferon NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 impaired impaire VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 15 phagocytes phagocyte NOUN NNS Number=Plur _ _ _ _ 16 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 Leishmania Leishmania PROPN NNP Number=Sing _ _ _ _ 19 donovani donovani PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 24 involved involve ADJ JJ Degree=Pos _ _ _ _ 25 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 not not PART RB _ _ _ _ _ 27 fully fully ADV RB _ _ _ _ _ 28 understood understand VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2650 # text = The changes in gene expression brought about by gamma interferon are thought to involve transient increases in the activities of cellular protein tyrosine kinases, including the Janus kinases Jak1 and Jak2, leading to tyrosine phosphorylation of the transcription factor Stat1. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 changes change NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 gene gene ADJ JJ Degree=Pos _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 brought bring VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 about about ADV RB _ _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 gamma gamma NOUN NN Number=Sing _ _ _ _ 10 interferon interferon NOUN NN Number=Sing _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 involve involve VERB VB VerbForm=Inf _ _ _ _ 15 transient transient ADJ JJ Degree=Pos _ _ _ _ 16 increases increase NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 activities activity NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 24 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 including include VERB VBG VerbForm=Ger _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 Janus Janus PROPN NNP Number=Sing _ _ _ _ 29 kinases kinase PROPN NNPS Number=Plur _ _ _ _ 30 Jak1 Jak1 PROPN NNP Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 Jak2 Jak2 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 leading lead VERB VBG VerbForm=Ger _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 tyrosine tyrosine VERB VB VerbForm=Inf _ _ _ _ 37 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 transcription transcription NOUN NN Number=Sing _ _ _ _ 41 factor factor NOUN NN Number=Sing _ _ _ _ 42 Stat1 stat1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 2651 # text = To investigate the mechanisms accounting for the impaired responses to gamma interferon, a model system for examining overall changes in protein tyrosine phosphorylation, activation of Jak1 and Jak2 and phosphorylation of Stat1 was developed in phorbol 12-myristate 13-acetate-differentiated U-937 cells. 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 accounting accounte NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 impaired impaired ADJ JJ Degree=Pos _ _ _ _ 9 responses response NOUN NNS Number=Plur _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 gamma gamma NOUN NN Number=Sing _ _ _ _ 12 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 model model NOUN NN Number=Sing _ _ _ _ 16 system system NOUN NN Number=Sing _ _ _ _ 17 for for SCONJ IN _ _ _ _ _ 18 examining examine VERB VBG VerbForm=Ger _ _ _ _ 19 overall overall ADJ JJ Degree=Pos _ _ _ _ 20 changes change NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 24 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 Jak1 Jak1 PROPN NNP Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 Jak2 Jak2 NUM CD NumType=Card _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 Stat1 stat1 PROPN NNP Number=Sing _ _ _ _ 35 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 36 developed develop VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 39 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 - - PUNCT : _ _ _ _ SpaceAfter=No 41 myristate myristate NOUN NN Number=Sing _ _ _ _ 42 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 - - SYM SYM _ _ _ _ SpaceAfter=No 49 937 937 NUM CD NumType=Card _ _ _ _ 50 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 2652 # text = Analysis of whole-cell lysates by antiphosphotyrosine immunoblotting showed that incubation with gamma interferon brought about specific increases in phosphotyrosine labeling of several proteins. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 whole whole ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 lysates lysate NOUN NNS Number=Plur _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 antiphosphotyrosine antiphosphotyrosine ADJ JJ Degree=Pos _ _ _ _ 9 immunoblotting immunoblott NOUN NN Number=Sing _ _ _ _ 10 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 12 incubation incubation NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 gamma gamma NOUN NN Number=Sing _ _ _ _ 15 interferon interferon NOUN NN Number=Sing _ _ _ _ 16 brought bring VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 about about ADP IN _ _ _ _ _ 18 specific specific ADJ JJ Degree=Pos _ _ _ _ 19 increases increase NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 phosphotyrosine phosphotyrosine NOUN NN Number=Sing _ _ _ _ 22 labeling labeling NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 several several ADJ JJ Degree=Pos _ _ _ _ 25 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2653 # text = Increased labeling of these proteins occurred to similar extents in control cells and in cells that had been infected with L. donovani for 16 h. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 labeling labeling NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ _ 6 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 similar similar ADJ JJ Degree=Pos _ _ _ _ 9 extents extent NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 control control NOUN NN Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 19 infected infect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 L. L. PROPN NNP Number=Sing _ _ _ _ 22 donovani donovani PROPN NNP Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 16 16 NUM CD NumType=Card _ _ _ _ 25 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2654 # text = Jak1, Jak2, and Stat1 were immunoprecipitated from control and interferon-treated cells, and tyrosine phosphorylation of these proteins, detected by antiphosphotyrosine immunoblotting was used to measured their activation. 1 Jak1 Jak1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Jak2 jak2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 Stat1 Stat1 PROPN NNP Number=Sing _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 immunoprecipitated immunoprecipitate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 control control NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 19 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 22 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 detected detect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 antiphosphotyrosine antiphosphotyrosine NOUN NN Number=Sing _ _ _ _ 27 immunoblotting immunoblotting NOUN NN Number=Sing _ _ _ _ 28 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 29 used use ADJ JJ Degree=Pos _ _ _ _ 30 to to PART TO _ _ _ _ _ 31 measured measure VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 33 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2655 # text = Tyrosine phosphorylation of Jak1, Jak2, and Stat1 increased markedly, in a dose-dependent manner, in U-937 cells incubated with gamma interferon. 1 Tyrosine Tyrosine NOUN NN Number=Sing _ _ _ _ 2 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Jak1 Jak1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 Jak2 jak2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 Stat1 Stat1 PROPN NNP Number=Sing _ _ _ _ 10 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 markedly markedly ADV RB _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 18 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 937 937 NUM CD NumType=Card _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 incubated incubate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 gamma gamma NOUN NN Number=Sing _ _ _ _ 28 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2656 # text = In contrast, in cells infected with L. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 L. L. PROPN NNP Number=Sing _ _ _ _ # sent_id = 2657 # text = donovani, tyrosine phosphorylation of Jak1, Jak2, and Stat1 was markedly impaired. 1 donovani donovani ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 tyrosine tyrosine ADJ JJ Degree=Pos _ _ _ _ 4 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 Jak1 Jak1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 Jak2 jak2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 Stat1 Stat1 PROPN NNP Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 markedly markedly ADV RB _ _ _ _ _ 14 impaired impaired VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 2658 # text = This effect was dependent upon the duration of exposure to L. donovani and was maximal and complete at 16 h. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 5 upon upon ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 duration duration NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 exposure exposure NOUN NN Number=Sing _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 L. L. PROPN NNP Number=Sing _ _ _ _ 12 donovani donovani PROPN NNP Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 complete complete ADJ JJ Degree=Pos _ _ _ _ 18 at at ADP IN _ _ _ _ _ 19 16 16 NUM CD NumType=Card _ _ _ _ 20 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2659 # text = Results similar to those observed with U-937 cells were also obtained with human peripheral blood monocytes. 1 Results result NOUN NNS Number=Plur _ _ _ _ 2 similar similar ADJ JJ Degree=Pos _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 5 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 937 937 NUM CD NumType=Card _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 also also ADV RB _ _ _ _ _ 13 obtained obtain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 17 blood blood NOUN NN Number=Sing _ _ _ _ 18 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2660 # text = These findings indicate that infection of human mononuclear phagocytes with L. donovani leads to impaired gamma interferon-mediated tyrosine phosphorylation and selective effects on the Jak-Stat1 pathway. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 infection infection NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 mononuclear mononuclear NOUN NN Number=Sing _ _ _ _ 9 phagocytes phagocyte NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 L. L. PROPN NNP Number=Sing _ _ _ _ 12 donovani donovani PROPN NNP Number=Sing _ _ _ _ 13 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 impaired impaired VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 gamma gamma NOUN NN Number=Sing _ _ _ _ 17 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 21 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 selective selective ADJ JJ Degree=Pos _ _ _ _ 24 effects effect NOUN NNS Number=Plur _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 Jak Jak PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 Stat1 Stat1 PROPN NNP Number=Sing _ _ _ _ 30 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2661 # text = Unresponsiveness to gamma interferon for activation of this pathway may explain impaired transcriptional responses in leishmania-infected cells. 1 Unresponsiveness Unresponsiveness NOUN NN Number=Sing _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 gamma gamma NOUN NN Number=Sing _ _ _ _ 4 interferon interferon NOUN NN Number=Sing _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 9 pathway pathway NOUN NN Number=Sing _ _ _ _ 10 may may AUX MD VerbForm=Fin _ _ _ _ 11 explain explain VERB VB VerbForm=Inf _ _ _ _ 12 impaired impaired ADJ JJ Degree=Pos _ _ _ _ 13 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 14 responses response NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 leishmania leishmania NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2662 # text = Document 003003287 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003287 003003287 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2663 # text = Multiple proteins interact with the nuclear inhibitory protein repressor element in the human interleukin-3 promoter. 1 Multiple multiple ADJ JJ Degree=Pos _ _ _ _ 2 proteins protein NOUN NNS Number=Plur _ _ _ _ 3 interact interact VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 repressor repressor NOUN NN Number=Sing _ _ _ _ 10 element element NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 3 3 NUM CD NumType=Card _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2664 # text = T cell expression of interleukin 3 (IL-3) is directed by positive and negative cis-acting DNA elements clustered within 300 base pairs of the transcriptional start site. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 6 3 3 NUM CD NumType=Card _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 3 3 X LS _ _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 directed direct VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 positive positive ADJ JJ Degree=Pos _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 negative negative ADJ JJ Degree=Pos _ _ _ _ 18 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 -acting -act VERB VBG VerbForm=Ger _ _ _ _ 20 DNA dna NOUN NN Number=Sing _ _ _ _ 21 elements element NOUN NNS Number=Plur _ _ _ _ 22 clustered cluster VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 within within ADP IN _ _ _ _ _ 24 300 300 NUM CD NumType=Card _ _ _ _ 25 base base NOUN NN Number=Sing _ _ _ _ 26 pairs pair NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 30 start start NOUN NN Number=Sing _ _ _ _ 31 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2665 # text = A strong repressor element, termed nuclear inhibitory protein (NIP), was previously mapped to a segment of the IL-3 promoter between nucleotides -271 and -250. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 strong strong ADJ JJ Degree=Pos _ _ _ _ 3 repressor repressor NOUN NN Number=Sing _ _ _ _ 4 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 NIP NIP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 previously previously ADV RB _ _ _ _ _ 16 mapped map VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 segment segment NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 3 3 NUM CD NumType=Card _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ _ 26 between between ADP IN _ _ _ _ _ 27 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 271 271 NUM CD NumType=Card _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 - - SYM SYM _ _ _ _ SpaceAfter=No 32 250 250 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 2666 # text = Functional characterization of this element demonstrates that it can mediate repression when linked in cis to a heterologous promoter. 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 characterization characterization NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 element element NOUN NN Number=Sing _ _ _ _ 6 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 9 can can AUX MD VerbForm=Fin _ _ _ _ 10 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 11 repression repression NOUN NN Number=Sing _ _ _ _ 12 when when ADV WRB PronType=Int _ _ _ _ 13 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 cis cis NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2667 # text = DNA binding experiments were carried out to characterize the repressor activity. 1 DNA dna NOUN NN Number=Sing _ _ _ _ 2 binding binding VERB VBG VerbForm=Ger _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 carried carry VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 out out ADV RB _ _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 characterize characterize VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 repressor repressor NOUN NN Number=Sing _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 2668 # text = Using varying conditions, three distinct complexes were shown to interact specifically with the NIP region, although only one correlates with repressor activity. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 varying varying VERB VBG VerbForm=Ger _ _ _ _ 3 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 three three NUM CD NumType=Card _ _ _ _ 6 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 7 complexes complexe NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 interact interact VERB VB VerbForm=Inf _ _ _ _ 12 specifically specifically ADV RB _ _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 NIP Nip PROPN NNP Number=Sing _ _ _ _ 16 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 although although SCONJ IN _ _ _ _ _ 19 only only ADV RB _ _ _ _ _ 20 one one NUM CD NumType=Card _ _ _ _ 21 correlates correlate NOUN NNS Number=Plur _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 repressor repressor NOUN NN Number=Sing _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2669 # text = Complex 1 results from binding of a ubiquitous polypeptide that recognizes the 3' portion of this sequence and is not required for repression. 1 Complex complex VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 1 1 NUM CD NumType=Card _ _ _ _ 3 results result NOUN NNS Number=Plur _ _ _ _ 4 from from SCONJ IN _ _ _ _ _ 5 binding binding VERB VBG VerbForm=Ger _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 9 polypeptide polypeptide NOUN NN Number=Sing _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 recognizes recognize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ' ' PUNCT `` _ _ _ _ _ 15 portion portion NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 18 sequence sequence NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 repression repression NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2670 # text = Complex 2 corresponds to binding of transcription factor (upstream stimulatory factor) to an E-box motif in the 5' portion of the NIP region. 1 Complex complex VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 2 2 NUM CD NumType=Card _ _ _ _ 3 corresponds corresponds NOUN NNS Number=Plur _ _ _ _ 4 to to SCONJ IN _ _ _ _ _ 5 binding binde VERB VBG VerbForm=Ger _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 11 stimulatory stimulatory ADJ JJ Degree=Pos _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 box box NOUN NN Number=Sing _ _ _ _ 18 motif motif NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ' 's PUNCT `` _ _ _ _ _ 23 portion portion NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 NIP NIP PROPN NNP Number=Sing _ _ _ _ 27 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2671 # text = DNA binding specificity of complex 3 overlaps with that of upstream stimulatory factor but is clearly distinct. 1 DNA dna NOUN NN Number=Sing _ _ _ _ 2 binding binde VERB VBG VerbForm=Ger _ _ _ _ 3 specificity specificity NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 complex complex ADJ JJ Degree=Pos _ _ _ _ 6 3 3 NUM CD NumType=Card _ _ _ _ 7 overlaps overlaps NOUN NNS Number=Plur _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 12 stimulatory stimulatory ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 clearly clearly ADV RB _ _ _ _ _ 17 distinct distinct ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2672 # text = To determine which of the latter two complexes represents NIP activity, we incorporated small alterations into the NIP site of an IL-3 promoter-linked reporter construct and examined their effects on NIP-mediated repression. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 which which PRON WDT PronType=Int _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 latter latter ADJ JJ Degree=Pos _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 complexes complexe NOUN NNS Number=Plur _ _ _ _ 9 represents represent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 NIP Nip ADJ JJ Degree=Pos _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 incorporated incorporate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 small small ADJ JJ Degree=Pos _ _ _ _ 16 alterations alteration NOUN NNS Number=Plur _ _ _ _ 17 into into ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 NIP NIP PROPN NNP Number=Sing _ _ _ _ 20 site site NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 3 3 NUM CD NumType=Card _ _ _ _ 26 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 reporter reporter NOUN NN Number=Sing _ _ _ _ 30 construct construct NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 33 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 34 effects effect NOUN NNS Number=Plur _ _ _ _ 35 on on ADP IN _ _ _ _ _ 36 NIP- NIP- SYM NFP _ _ _ _ SpaceAfter=No 37 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 repression repression NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 2673 # text = Functional specificity for repression matches the DNA binding specificity of complex 3; both repressor activity and complex 3 binding require the consensus sequence CTCACNTNC. 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 specificity specificity NOUN NN Number=Sing _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 repression repression NOUN NN Number=Sing _ _ _ _ 5 matches match VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 DNA dna NOUN NN Number=Sing _ _ _ _ 8 binding binde VERB VBG VerbForm=Ger _ _ _ _ 9 specificity specificity NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 complex complex NOUN NN Number=Sing _ _ _ _ 12 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ; ; PUNCT , _ _ _ _ _ 14 both both CCONJ CC _ _ _ _ _ 15 repressor repressor NOUN NN Number=Sing _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 complex complex NOUN NN Number=Sing _ _ _ _ 19 3 3 NUM CD NumType=Card _ _ _ _ 20 binding bind VERB VBG VerbForm=Ger _ _ _ _ 21 require require VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 consensus consensus NOUN NN Number=Sing _ _ _ _ 24 sequence sequence NOUN NN Number=Sing _ _ _ _ 25 CTCACNTNC Ctcacntnc NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2674 # text = Document 003003292 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003292 003003292 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2675 # text = Interleukin 12 induces tyrosine phosphorylation and activation of STAT4 in human lymphocytes. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ _ 2 12 12 NUM CD NumType=Card _ _ _ _ 3 induces induce NOUN NNS Number=Plur _ _ _ _ 4 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 5 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 STAT4 Stat4 NUM CD NumType=Card _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2676 # text = Interleukin 12 (IL-12) is an important immunoregulatory cytokine whose receptor is a member of the hematopoietin receptor superfamily. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ _ 2 12 12 NUM CD NumType=Card _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 important important ADJ JJ Degree=Pos _ _ _ _ 11 immunoregulatory immunoregulatory ADJ JJ Degree=Pos _ _ _ _ 12 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 13 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 member member NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 hematopoietin hematopoietin NOUN NN Number=Sing _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ _ 22 superfamily superfamily ADV RB _ _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2677 # text = We have recently demonstrated that stimulation of human T and natural killer cells with IL-12 induces tyrosine phosphorylation of the Janus family tyrosine kinase JAK2 and Tyk2, implicating these kinases in the immediate biochemical response to IL-12. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 recently recently ADV RB _ _ _ _ _ 4 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 T T PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 natural natural ADJ JJ Degree=Pos _ _ _ _ 12 killer killer NOUN NN Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 12 12 NUM CD NumType=Card _ _ _ _ 18 induces induces NOUN NNS Number=Plur _ _ _ _ 19 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 20 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 Janus Janus PROPN NNP Number=Sing _ _ _ _ 24 family family NOUN NN Number=Sing _ _ _ _ 25 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 26 kinase kinase NOUN NN Number=Sing _ _ _ _ 27 JAK2 Jak2 NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 Tyk2 tyk2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 implicating implicate VERB VBG VerbForm=Ger _ _ _ _ 32 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 33 kinases kinase NOUN NNS Number=Plur _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 37 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 38 response response NOUN NN Number=Sing _ _ _ _ 39 to to ADP IN _ _ _ _ _ 40 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 2678 # text = Recently, transcription factors known as STATs (signal transducers and activators of transcription) have been shown to be tyrosine phosphorylated and activated in response to a number of cytokines that bind hematopoietin receptors and activate JAK kinases. 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factors factor NOUN NNS Number=Plur _ _ _ _ 5 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 as as ADP IN _ _ _ _ _ 7 STATs STATs PROPN NNP Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 signal signal NOUN NN Number=Sing _ _ _ _ 10 transducers transducer NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 activators activator NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 18 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 be be AUX VB VerbForm=Inf _ _ _ _ 21 tyrosine tyrosine PRON PRP _ _ _ _ _ 22 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 response response NOUN NN Number=Sing _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 number number NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 32 that that PRON WDT PronType=Rel _ _ _ _ 33 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 hematopoietin hematopoietin ADJ JJ Degree=Pos _ _ _ _ 35 receptors receptor NOUN NNS Number=Plur _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 activate activate ADJ JJ Degree=Pos _ _ _ _ 38 JAK JAK PROPN NNP Number=Sing _ _ _ _ 39 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 2679 # text = In this report we demonstrate that IL-12 induces tyrosine phosphorylation of a recently identified 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - SYM SYM _ _ _ _ SpaceAfter=No 9 12 12 NUM CD NumType=Card _ _ _ _ 10 induces induce NOUN NNS Number=Plur _ _ _ _ 11 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 12 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 recently recently ADV RB _ _ _ _ _ 16 identified identify ADJ JJ Degree=Pos _ _ _ _ # sent_id = 2680 # text = STAT family member, STAT4, and show that STAT4 expression is regulated by T-cell activation. 1 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 2 family family NOUN NN Number=Sing _ _ _ _ 3 member member NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 STAT4 STAT4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 STAT4 STAT4 NUM CD NumType=Card _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2681 # text = Furthermore, we show that IL-12 stimulates formation of a DNA-binding complex that recognizes a DNA sequence previously shown to bind STAT proteins and that this complex contains STAT4. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 12 12 NUM CD NumType=Card _ _ _ _ 9 stimulates stimulate NOUN NNS Number=Plur _ _ _ _ 10 formation formation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 binding binding VERB VBG VerbForm=Ger _ _ _ _ 16 complex complex NOUN NN Number=Sing _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 recognizes recognize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 DNA dna NOUN NN Number=Sing _ _ _ _ 21 sequence sequence NOUN NN Number=Sing _ _ _ _ 22 previously previously ADV RB _ _ _ _ _ 23 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 bind bind VERB VB VerbForm=Inf _ _ _ _ 26 STAT Stat NOUN NN Number=Sing _ _ _ _ 27 proteins protein NOUN NNS Number=Plur _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 that that SCONJ IN _ _ _ _ _ 30 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 31 complex complex NOUN NN Number=Sing _ _ _ _ 32 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 STAT4 STAT4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2682 # text = These data, and the recent demonstration of JAK phosphorylation by IL-12, identify a rapid signal-transduction pathway likely to mediate IL-12-induced gene expression. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 recent recent ADJ JJ Degree=Pos _ _ _ _ 7 demonstration demonstration NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 JAK JAK PROPN NNP Number=Sing _ _ _ _ 10 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 identify identify VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 19 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 transduction transduction NOUN NN Number=Sing _ _ _ _ 22 pathway pathway NOUN NN Number=Sing _ _ _ _ 23 likely likely ADV RB _ _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 26 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2683 # text = Document 003003295 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003295 003003295 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2684 # text = Heterogeneous expression of Epstein-Barr virus latent proteins in endemic Burkitt's lymphoma. 1 Heterogeneous Heterogeneous ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 Barr Barr PROPN NNP Number=Sing _ _ _ _ 7 virus virus NOUN NN Number=Sing _ _ _ _ 8 latent latent ADJ JJ Degree=Pos _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 endemic endemic ADJ JJ Degree=Pos _ _ _ _ 12 Burkitt Burkitt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 's 's PART POS _ _ _ _ _ 14 lymphoma lymphoma NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2685 # text = Epstein-Barr virus (EBV)-infected cells may sustain three distinct forms of virus latency. 1 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 Barr Barr PROPN NNP Number=Sing _ _ _ _ 4 virus virus NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 - - PUNCT : _ _ _ _ SpaceAfter=No 9 infected infect ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 may may AUX MD VerbForm=Fin _ _ _ _ 12 sustain sustain VERB VB VerbForm=Inf _ _ _ _ 13 three three NUM CD NumType=Card _ _ _ _ 14 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 15 forms form NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 virus virus NOUN NN Number=Sing _ _ _ _ 18 latency latency NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2686 # text = In lymphoblastoid cell lines, six EBV-encoded nuclear antigens (EBNA1, 2, 3A, 3B, 3C, -LP), three latent membrane proteins (LMP1, 2A, 2B), and two nuclear RNAs (EBERs) are expressed. 1 In in ADP IN _ _ _ _ _ 2 lymphoblastoid lymphoblastoid ADJ JJ Degree=Pos _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 six six NUM CD NumType=Card _ _ _ _ 7 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 encoded encode VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 antigens antigen NOUN NNS Number=Plur _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 EBNA1 EBNA1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 3A 3a NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 3B 3B NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 3C 3C NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 LP Lp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 three three NUM CD NumType=Card _ _ _ _ 28 latent latent ADJ JJ Degree=Pos _ _ _ _ 29 membrane membrane NOUN NN Number=Sing _ _ _ _ 30 proteins protein NOUN NNS Number=Plur _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 2A 2a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 2B 2B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 two two NUM CD NumType=Card _ _ _ _ 41 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 42 RNAs RNAs PROPN NNPS Number=Plur _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 EBERs EBERs PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ _ 46 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 47 expressed expressed ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 2687 # text = This form of latency, termed latency III, is also encountered in some posttransplant lymphoproliferative disorders. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 form form NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 latency latency NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 latency latency NOUN NN Number=Sing _ _ _ _ 8 III iii NUM CD NumType=Card _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 also also ADV RB _ _ _ _ _ 12 encountered encounter VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 some some DET DT _ _ _ _ _ 15 posttransplant posttransplant ADJ JJ Degree=Pos _ _ _ _ 16 lymphoproliferative lymphoproliferative ADJ JJ Degree=Pos _ _ _ _ 17 disorders disorder NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2688 # text = In EBV-positive cases of Hodgkin's disease, the EBERs, EBNA1, and the LMPs are expressed (latency II), whereas in Burkitt's lymphoma (BL) only the EBERs and EBNA1 have been detected (latency I). 1 In in ADP IN _ _ _ _ _ 2 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 positive positive ADJ JJ Degree=Pos _ _ _ _ 5 cases case NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Hodgkin Hodgkin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 's 's PART POS _ _ _ _ _ 9 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 EBERs EBERs PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 EBNA1 EBNA1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 LMPs LMP NOUN NNS Number=Plur _ _ _ _ 19 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 expressed expressed ADJ JJ Degree=Pos _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 latency latency NOUN NN Number=Sing _ _ _ _ 23 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 whereas wherea ADV RB _ _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 Burkitt Burkitt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 's 's PART POS _ _ _ _ _ 30 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 BL BL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 only only ADV RB _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 EBERs EBERs PROPN NNPS Number=Plur _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 EBNA1 EBNA1 PROPN NNP Number=Sing _ _ _ _ 39 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 40 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 41 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 latency latency INTJ UH _ _ _ _ _ 44 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 2689 # text = We have studied the expression of EBV proteins in 17 cases of EBV-positive endemic BL by immunohistology. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 studied studie VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 EBV EBV PROPN NNP Number=Sing _ _ _ _ 8 proteins protein NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 17 17 NUM CD NumType=Card _ _ _ _ 11 cases cas NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 positive positive ADJ JJ Degree=Pos _ _ _ _ 16 endemic endemic ADJ JJ Degree=Pos _ _ _ _ 17 BL Bl NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 immunohistology immunohistology NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2690 # text = Expression of LMP1 was seen in variable proportions of tumor cells in two cases and EBNA2 was detected in some tumor cells in three other cases. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 variable variable ADJ JJ Degree=Pos _ _ _ _ 8 proportions proportion NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 tumor tumor NOUN NN Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 two two NUM CD NumType=Card _ _ _ _ 14 cases case NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 EBNA2 Ebna2 NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 some some DET DT _ _ _ _ _ 21 tumor tumor NOUN NN Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 three three NUM CD NumType=Card _ _ _ _ 25 other other ADJ JJ Degree=Pos _ _ _ _ 26 cases case NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2691 # text = Also, the BZLF1 trans-activator protein was expressed in a few tumor cells in 6 cases, indicating entry into the lytic cycle. 1 Also also ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 BZLF1 Bzlf1 NOUN NN Number=Sing _ _ _ _ 5 trans- trans- PUNCT , _ _ _ _ SpaceAfter=No 6 activator activator NOUN NN Number=Sing _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 few few ADJ JJ Degree=Pos _ _ _ _ 13 tumor tumor NOUN NN Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 6 6 NUM CD NumType=Card _ _ _ _ 17 cases case NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 20 entry entry NOUN NN Number=Sing _ _ _ _ 21 into into ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 24 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2692 # text = A phenotypic drift from latency I to latency III has been observed previously in some BL cell lines. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 phenotypic phenotypic ADJ JJ Degree=Pos _ _ _ _ 3 drift drift NOUN NN Number=Sing _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 latency latency NOUN NN Number=Sing _ _ _ _ 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 latency latency VERB VB VerbForm=Inf _ _ _ _ 9 III III PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 12 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 previously previously ADV RB _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 some some DET DT _ _ _ _ _ 16 BL Bl ADJ JJ Degree=Pos _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2693 # text = Our results suggest that a similar phenomenon may occur in BL in vivo and indicate that the operational definition of EBV latencies is not easily applied to human tumors. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 similar similar ADJ JJ Degree=Pos _ _ _ _ 7 phenomenon phenomenon NOUN NN Number=Sing _ _ _ _ 8 may may AUX MD VerbForm=Fin _ _ _ _ 9 occur occur VERB VB VerbForm=Inf _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 BL BL PROPN NNP Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 vivo vivo NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 operational operational ADJ JJ Degree=Pos _ _ _ _ 19 definition definition NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 EBV EBV PROPN NNP Number=Sing _ _ _ _ 22 latencies latency NOUN NNS Number=Plur _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 not not PART RB _ _ _ _ _ 25 easily easily ADV RB _ _ _ _ _ 26 applied apply VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 tumors tumor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2694 # text = Document 003003298 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003298 003003298 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2695 # text = Expression of erythroid-specific genes in acute megakaryoblastic leukaemia and transient myeloproliferative disorder in Down's syndrome. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 genes gene NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 acute acute ADJ JJ Degree=Pos _ _ _ _ 9 megakaryoblastic megakaryoblastic ADJ JJ Degree=Pos _ _ _ _ 10 leukaemia leukaemia NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 transient transient ADJ JJ Degree=Pos _ _ _ _ 13 myeloproliferative myeloproliferative ADJ JJ Degree=Pos _ _ _ _ 14 disorder disorder NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 Down Down PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 's 's PART POS _ _ _ _ _ 18 syndrome syndrome NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2696 # text = Acute megakaryoblastic leukaemia (M7) and transient myeloproliferative disorder in Down's syndrome (TMD) are characterized by rapid growth of abnormal blast cells which express megakaryocytic markers. 1 Acute Acute ADV RB _ _ _ _ _ 2 megakaryoblastic megakaryoblastic ADJ JJ Degree=Pos _ _ _ _ 3 leukaemia leukaemia NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 M7 M7 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 transient transient ADJ JJ Degree=Pos _ _ _ _ 9 myeloproliferative myeloproliferative ADJ JJ Degree=Pos _ _ _ _ 10 disorder disorder NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 Down Down PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 's 's PART POS _ _ _ _ _ 14 syndrome syndrome NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 TMD tMd NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 characterized characterize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 22 growth growth NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 abnormal abnormal ADJ JJ Degree=Pos _ _ _ _ 25 blast blast ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 which which PRON WDT PronType=Rel _ _ _ _ 28 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 30 markers marker NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2697 # text = To clarify properties of the blast cells in M7 and TMD cases, we examined erythroid markers expression in blasts from six cases with M7 and seven cases with TMD in this study. 1 To to PART TO _ _ _ _ _ 2 clarify clarify VERB VB VerbForm=Inf _ _ _ _ 3 properties property NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 blast blast ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 M7 M7 NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 TMD tMd NOUN NN Number=Sing _ _ _ _ 12 cases case NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 15 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 17 markers marker NOUN NNS Number=Plur _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 blasts blast NOUN NNS Number=Plur _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 six six NUM CD NumType=Card _ _ _ _ 23 cases case NOUN NNS Number=Plur _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 M7 M7 NUM CD NumType=Card _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 seven seven NUM CD NumType=Card _ _ _ _ 28 cases casis NOUN NNS Number=Plur _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 TMD tMd NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 33 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2698 # text = Erythroid-specific mRNAs encoding gamma-globin and erythroid delta-aminolevulinate synthase were found to be expressed in blasts from most of these cases, indicating that majorities of the blasts in M7 and TMD cases have erythroid and megakaryocytic phenotypes. 1 Erythroid Erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 specific specific ADJ JJ Degree=Pos _ _ _ _ 4 mRNAs mRNA NOUN NNS Number=Plur _ _ _ _ 5 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 6 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 globin globin NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 11 delta- delta- PUNCT , _ _ _ _ SpaceAfter=No 12 aminolevulinate aminolevulinate ADJ JJ Degree=Pos _ _ _ _ 13 synthase synthase NOUN NN Number=Sing _ _ _ _ 14 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 blasts blast NOUN NNS Number=Plur _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 most most ADJ JJS Degree=Sup _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 25 cases case NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 28 that that SCONJ IN _ _ _ _ _ 29 majorities majoritie NOUN NNS Number=Plur _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 blasts blast NOUN NNS Number=Plur _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 M7 M7 NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 TMD tMd NOUN NN Number=Sing _ _ _ _ 37 cases cas NOUN NNS Number=Plur _ _ _ _ 38 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 39 erythroid erythroid VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 42 phenotypes phenotype NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 2699 # text = We also found that mRNAs encoding GATA-1 and GATA-2 are expressed in all these cases. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 mRNAs mRNAs PROPN NNPS Number=Plur _ _ _ _ 6 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 7 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 all all DET PDT _ _ _ _ _ 18 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 19 cases case NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2700 # text = These results suggest that M7 blasts and TMD blasts correspond to the erythroid/megakaryocytic bipotential progenitor cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 M7 M7 NUM CD NumType=Card _ _ _ _ 6 blasts blast NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 TMD tMd NOUN NN Number=Sing _ _ _ _ 9 blasts blast NOUN NNS Number=Plur _ _ _ _ 10 correspond correspond VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 16 bipotential bipotential ADJ JJ Degree=Pos _ _ _ _ 17 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2701 # text = Document 003003299 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003299 003003299 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2702 # text = Growth regulation and cellular changes during differentiation of human prostatic cancer LNCaP cells as induced by T lymphocyte-conditioned medium. 1 Growth growth NOUN NN Number=Sing _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 5 changes change NOUN NNS Number=Plur _ _ _ _ 6 during during ADP IN _ _ _ _ _ 7 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 prostatic prostatic ADJ JJ Degree=Pos _ _ _ _ 11 cancer cancer NOUN NN Number=Sing _ _ _ _ 12 LNCaP Lncap NOUN NN Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 as as SCONJ IN _ _ _ _ _ 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 conditioned condition VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 medium medium NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2703 # text = Human prostatic epithelial cells from an androgen-dependent LNCaP cell line were examined in response to conditioned medium (CM) derived from phytohemagglutinin (PHA)-stimulated lymphocytes. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 prostatic prostatic ADJ JJ Degree=Pos _ _ _ _ 3 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 androgen androgen NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 10 LNCaP Lncap NOUN NN Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 line line NOUN NN Number=Sing _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 response response NOUN NN Number=Sing _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 conditioned condition VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 medium medium NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 CM cm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 derived derive VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 phytohemagglutinin phytohemagglutinin NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 PHA PHA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2704 # text = Addition of CM caused a greater than 70% reduction of cell proliferation by cell counting and cell cycle. 1 Addition Addition PROPN NNP Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 CM cm PROPN NNP Number=Sing _ _ _ _ 4 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 greater greater ADJ JJR Degree=Cmp _ _ _ _ 7 than than ADP IN _ _ _ _ _ 8 70 70 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 % % SYM NN Number=Sing _ _ _ _ 10 reduction reduction NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 counting counting NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2705 # text = These cells showed G1 phase arrest and the clonogenicity was reduced. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 G1 G1 NUM CD NumType=Card _ _ _ _ 5 phase phase NOUN NN Number=Sing _ _ _ _ 6 arrest arrest NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 clonogenicity clonogenicity NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 2706 # text = The growth-modulating effect was dose-dependent and not due to cell lysis or apoptosis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 modulating modulating NOUN NN Number=Sing _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 due due VERB VB VerbForm=Inf _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 cell cell VERB VB VerbForm=Inf _ _ _ _ 15 lysis lysis NOUN NN Number=Sing _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2707 # text = The binding of androgen to androgen receptor on these cells showed approximately 50% reduction, underlining a proliferation reduction mechanism. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 binding binding NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 androgen androgen NOUN NN Number=Sing _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 androgen androgen VERB VB VerbForm=Inf _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 approximately approximately ADV RB _ _ _ _ _ 13 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 % % SYM NN Number=Sing _ _ _ _ 15 reduction reduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 underlining underlin VERB VBG VerbForm=Ger _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 20 reduction reduction NOUN NN Number=Sing _ _ _ _ 21 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2708 # text = The prostate-specific antigen (PSA) was downregulated to approximately 75% during the process. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 prostate prostate NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 antigen antigen NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 PSA PSa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 downregulated downregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 approximately approximately ADV RB _ _ _ _ _ 13 75 75 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 % % SYM NN Number=Sing _ _ _ _ 15 during during ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 process process NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2709 # text = Cell morphology showed dendritic processes extending from cytoplasm and other neuroendocrine cell characteristics. 1 Cell cell NOUN NN Number=Sing _ _ _ _ 2 morphology morphology NOUN NN Number=Sing _ _ _ _ 3 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 dendritic dendritic ADJ JJ Degree=Pos _ _ _ _ 5 processes process NOUN NNS Number=Plur _ _ _ _ 6 extending extend VERB VBG VerbForm=Ger _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 other other ADJ JJ Degree=Pos _ _ _ _ 11 neuroendocrine neuroendocrine NOUN NN Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 characteristics characteristic NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 2710 # text = The expression of several cytoskeleton and intracellular proteins increased as determined by immunostaining on slides and by ELISA procedures. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 several several ADJ JJ Degree=Pos _ _ _ _ 5 cytoskeleton cytoskeleton NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 8 proteins protein NOUN NNS Number=Plur _ _ _ _ 9 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 as as SCONJ IN _ _ _ _ _ 11 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by SCONJ IN _ _ _ _ _ 13 immunostaining immunostain VERB VBG VerbForm=Ger _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 slides slide NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 ELISA ELISA PROPN NNP Number=Sing _ _ _ _ 19 procedures procedure NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2711 # text = These included vimentin, correlating to cell shape changes, cytokeratins 8 and 18, associated with differentiated cell types of prostate epithelia, and neuron-specific enolase and serotonin, associated with neuroendocrine cells. 1 These these PRON DT Number=Plur|PronType=Dem _ _ _ _ 2 included include VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 vimentin vimentin NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 correlating correlat VERB VBG VerbForm=Ger _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 cell cell VERB VB VerbForm=Inf _ _ _ _ 8 shape shape NOUN NN Number=Sing _ _ _ _ 9 changes change NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 cytokeratins cytokeratin NOUN NNS Number=Plur _ _ _ _ 12 8 8 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 18 18 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 types type NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 prostate prostate NOUN NN Number=Sing _ _ _ _ 23 epithelia epithelia NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 neuron neuron NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 specific specific ADJ JJ Degree=Pos _ _ _ _ 29 enolase enolase NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 serotonin serotonin NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 neuroendocrine neuroendocrine NOUN NN Number=Sing _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 2712 # text = From these cellular changes, we can infer that the cell growth was modulated along with induction of terminal differentiation. 1 From from ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 4 changes change NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 can can AUX MD VerbForm=Fin _ _ _ _ 8 infer infer VERB VB VerbForm=Inf _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 growth growth NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 modulated modulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 along along ADP IN _ _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 induction induction NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 20 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2713 # text = Activated T cells were demonstrated to be important in providing the modulating activity. 1 Activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 T t PROPN NNP Number=Sing _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 important important ADJ JJ Degree=Pos _ _ _ _ 9 in in SCONJ IN _ _ _ _ _ 10 providing provide VERB VBG VerbForm=Ger _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 modulating modulating ADJ JJ Degree=Pos _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 2714 # text = This growth modulator was semipurified and had an estimated molecular weight 13,000 to 24,000 Da. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 growth growth NOUN NN Number=Sing _ _ _ _ 3 modulator modulator NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 semipurified semipurify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 had have VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 estimated estimate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 molecular molecular NOUN NN Number=Sing _ _ _ _ 11 weight weight NOUN NN Number=Sing _ _ _ _ 12 13,000 13,000 NUM CD NumType=Card _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 24,000 24,000 NUM CD NumType=Card _ _ _ _ 15 Da da PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2715 # text = The activity was determined to be distinct from TGF, TNF, and some commonly known lymphokines. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activity activity NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 determined determine ADJ JJ Degree=Pos _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 some some DET DT _ _ _ _ _ 15 commonly commonly ADV RB _ _ _ _ _ 16 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 lymphokines lymphokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2716 # text = The interaction between lymphoid and prostatic cells in growth and development is described. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 interaction interaction NOUN NN Number=Sing _ _ _ _ 3 between between ADP IN _ _ _ _ _ 4 lymphoid lymphoid NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 prostatic prostatic ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 growth growth NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 development development NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2717 # text = Document 003003300 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003300 003003300 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2718 # text = Two distinct forms of active transcription factor CREB (cAMP response element binding protein). 1 Two two NUM CD NumType=Card _ _ _ _ 2 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 3 forms form NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 active active ADJ JJ Degree=Pos _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 CREB Creb NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 cAMP camp NOUN NN Number=Sing _ _ _ _ 11 response response NOUN NN Number=Sing _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2719 # text = Mammalian cells express two distinct forms of transcription factor CREB (cAMP response element binding protein) that are apparently the products of alternative splicing of the CREB gene transcript. 1 Mammalian Mammalian ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 6 forms form NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 CREB Creb NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 cAMP camp NOUN NN Number=Sing _ _ _ _ 13 response response NOUN NN Number=Sing _ _ _ _ 14 element element NOUN NN Number=Sing _ _ _ _ 15 binding bind VERB VBG VerbForm=Ger _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 apparently apparently ADV RB _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 products product NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 25 splicing splicing NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 CREB CREB PROPN NNP Number=Sing _ _ _ _ 29 gene gene NOUN NN Number=Sing _ _ _ _ 30 transcript transcript NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2720 # text = The two proteins differ by a 14-amino acid serine-rich insertion present in one of the CREB isoforms. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 proteins protein NOUN NNS Number=Plur _ _ _ _ 4 differ differ VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 14 14 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 amino amino NOUN NN Number=Sing _ _ _ _ 10 acid acid NOUN NN Number=Sing _ _ _ _ 11 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 rich rich ADJ JJ Degree=Pos _ _ _ _ 14 insertion insertion NOUN NN Number=Sing _ _ _ _ 15 present present ADJ JJ Degree=Pos _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 one one NUM CD NumType=Card _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 CREB CREB PROPN NNP Number=Sing _ _ _ _ 21 isoforms isoform NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2721 # text = We show that both CREB isoforms are expressed in many cell types and mammalian species. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 both both DET DT _ _ _ _ _ 5 CREB Creb NOUN NN Number=Sing _ _ _ _ 6 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 many many ADJ JJ Degree=Pos _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 types type NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 15 species species NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2722 # text = Both encode proteins that bind specifically to a cAMP response element in vitro. 1 Both both DET DT _ _ _ _ _ 2 encode encode NOUN NN Number=Sing _ _ _ _ 3 proteins protein NOUN NNS Number=Plur _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 specifically specifically ADV RB _ _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 cAMP camp NOUN NN Number=Sing _ _ _ _ 10 response response NOUN NN Number=Sing _ _ _ _ 11 element element NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 2723 # text = As expected for proteins of this class, the CREB proteins bind DNA as dimers. 1 As as SCONJ IN _ _ _ _ _ 2 expected expect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 proteins protein NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 class class NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 CREB CREB ADJ JJ Degree=Pos _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 bind bind ADP IN _ _ _ _ _ 13 DNA dna NOUN NN Number=Sing _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 dimers dimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2724 # text = Both proteins impart cAMP-regulated transcriptional activity to a heterologous DNA-binding domain, showing that cAMP directly modulates the transcriptional stimulatory activity of CREB. 1 Both both DET DT _ _ _ _ _ 2 proteins protein NOUN NNS Number=Plur _ _ _ _ 3 impart impart VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 binding binding VERB VBG VerbForm=Ger _ _ _ _ 15 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 showing show VERB VBG VerbForm=Ger _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 cAMP camp PROPN NNP Number=Sing _ _ _ _ 20 directly directly ADV RB _ _ _ _ _ 21 modulates modulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 24 stimulatory stimulatory ADJ JJ Degree=Pos _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2725 # text = The presence of multiple CREB isoforms with identical DNA-binding specificities but differences in the presumed regulatory domain raises the possibility that CREB proteins may be able to integrate distinct regulatory signals at the level of gene transcription. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 presence presence NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 5 CREB Creb NOUN NN Number=Sing _ _ _ _ 6 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 identical identical ADJ JJ Degree=Pos _ _ _ _ 9 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 specificities specificity NOUN NNS Number=Plur _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 differences difference NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 presumed presume VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 19 domain domain NOUN NN Number=Sing _ _ _ _ 20 raises raise VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 possibility possibility NOUN NN Number=Sing _ _ _ _ 23 that that PRON WDT PronType=Rel _ _ _ _ 24 CREB CREB PROPN NNP Number=Sing _ _ _ _ 25 proteins protein VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 may may AUX MD VerbForm=Fin _ _ _ _ 27 be be AUX VB VerbForm=Inf _ _ _ _ 28 able able ADJ JJ Degree=Pos _ _ _ _ 29 to to PART TO _ _ _ _ _ 30 integrate integrate VERB VB VerbForm=Inf _ _ _ _ 31 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 32 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 33 signals signal NOUN NNS Number=Plur _ _ _ _ 34 at at ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 level level NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 gene gene NOUN NN Number=Sing _ _ _ _ 39 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2726 # text = Document 003003302 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003302 003003302 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2727 # text = Transcription factors as targets for oxidative signalling during lymphocyte activation. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 as as ADP IN _ _ _ _ _ 4 targets target NOUN NNS Number=Plur _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 7 signalling signalling NOUN NN Number=Sing _ _ _ _ 8 during during ADP IN _ _ _ _ _ 9 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2728 # text = We previously have demonstrated a requirement for oxidative events during cell cycle entry in T lymphocytes and have hypothesised that reactive oxygen species may act as intracellular signalling agents during lymphocyte activation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 previously previously ADV RB _ _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 requirement requirement NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 9 events event NOUN NNS Number=Plur _ _ _ _ 10 during during ADP IN _ _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 cycle cycle NOUN NN Number=Sing _ _ _ _ 13 entry entry NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 T T PROPN NNP Number=Sing _ _ _ _ 16 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 hypothesised hypothesise VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 21 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 22 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 23 species species NOUN NNS Number=Plur _ _ _ _ 24 may may AUX MD VerbForm=Fin _ _ _ _ 25 act act VERB VB VerbForm=Inf _ _ _ _ 26 as as ADP IN _ _ _ _ _ 27 intracellular intracelular ADJ JJ Degree=Pos _ _ _ _ 28 signalling signall NOUN NN Number=Sing _ _ _ _ 29 agents agent NOUN NNS Number=Plur _ _ _ _ 30 during during ADP IN _ _ _ _ _ 31 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 2729 # text = In the current study, cysteamine, an aminothiol compound with antioxidant activity, has been used to further investigate the role of oxidative signalling during lymphocyte activation. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 current current ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 cysteamine cysteamine NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 aminothiol aminothiol ADJ JJ Degree=Pos _ _ _ _ 10 compound compound NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 antioxidant antioxidant ADJ JJ Degree=Pos _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 17 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 further further ADV RB _ _ _ _ _ 20 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 role role NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 25 signalling signalling NOUN NN Number=Sing _ _ _ _ 26 during during ADP IN _ _ _ _ _ 27 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2730 # text = Treatment of normal human peripheral blood lymphocytes with cysteamine in vitro was found to inhibit proliferation in a dose-dependent manner, with essentially complete inhibition occurring at a dose of 400 microM. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 normal normal ADJ JJ Degree=Pos _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 6 blood blood NOUN NN Number=Sing _ _ _ _ 7 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 cysteamine cysteamine NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 vitro vitro NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 16 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 22 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 essentially essentially ADV RB _ _ _ _ _ 26 complete complete ADJ JJ Degree=Pos _ _ _ _ 27 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 28 occurring occurre VERB VBG VerbForm=Ger _ _ _ _ 29 at at ADP IN _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 dose dose NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 400 400 NUM CD NumType=Card _ _ _ _ 34 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 2731 # text = This inhibitory effect was limited to the first 2 h after mitogenic activation, localizing the time-frame of action of cysteamine to within the commitment period. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 3 effect effect NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 limited limit ADJ JJ Degree=Pos _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 9 2 2 NUM CD NumType=Card _ _ _ _ 10 h h NOUN NN Number=Sing _ _ _ _ 11 after after ADP IN _ _ _ _ _ 12 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 localizing localize VERB VBG VerbForm=Ger _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 frame frame NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 action action NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 cysteamine cysteamine NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 within within ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 commitment commitment NOUN NN Number=Sing _ _ _ _ 28 period period NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2732 # text = It therefore was of interest to establish which, if any, commitment events were affected by oxidative signalling during cell cycle entry. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 therefore therefore ADV RB _ _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 interest interest NOUN NN Number=Sing _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 establish establish VERB VB VerbForm=Inf _ _ _ _ 8 which which PRON WDT PronType=Int _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 if if SCONJ IN _ _ _ _ _ 11 any any DET DT _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 commitment commitment NOUN NN Number=Sing _ _ _ _ 14 events event NOUN NNS Number=Plur _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 19 signalling signalling NOUN NN Number=Sing _ _ _ _ 20 during during ADP IN _ _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 cycle cycle NOUN NN Number=Sing _ _ _ _ 23 entry entry NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2733 # text = Taking the IL-2 gene as a candidate, we examined the effect of cysteamine treatment on early gene expression during lymphocyte activation, and on the activity of transcription factors AP-1, NF-kappa B, NF-AT and Oct1, whose functions are required for expression of the IL-2 mRNA. 1 Taking take VERB VBG VerbForm=Ger _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 candidate candidate NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 12 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 effect effect NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 cysteamine cysteamine NOUN NN Number=Sing _ _ _ _ 17 treatment treatment NOUN NN Number=Sing _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 early early ADJ JJ Degree=Pos _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 during during ADP IN _ _ _ _ _ 23 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 on on ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 activity activity NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ _ 32 factors factor NOUN NNS Number=Plur _ _ _ _ 33 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT , _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 kappa kappa PROPN NNP Number=Sing _ _ _ _ 40 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 AT at PROPN NNP Number=Sing _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 Oct1 Oct1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 49 functions function NOUN NNS Number=Plur _ _ _ _ 50 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 51 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 52 for for ADP IN _ _ _ _ _ 53 expression expression NOUN NN Number=Sing _ _ _ _ 54 of of ADP IN _ _ _ _ _ 55 the the DET DT Definite=Def|PronType=Art _ _ _ _ 56 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 2 2 NUM CD NumType=Card _ _ _ _ 59 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 2734 # text = Cysteamine treatment inhibited both expression of the IL-2 mRNA and secretion of IL-2 into the culture medium. 1 Cysteamine Cysteamine ADJ JJ Degree=Pos _ _ _ _ 2 treatment treatment NOUN NN Number=Sing _ _ _ _ 3 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 both both DET DT _ _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 secretion secretion NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 into into ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 culture culture NOUN NN Number=Sing _ _ _ _ 21 medium medium NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2735 # text = The inhibitory effect of cysteamine may be mediated at least in part by an effect on transcription factor function, as the DNA binding activities of AP-1 and NF-kappa B extracted from mitogen-stimulated cells were significantly inhibited by cysteamine treatment. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 3 effect effect NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 cysteamine cysteamine NOUN NN Number=Sing _ _ _ _ 6 may may AUX MD VerbForm=Fin _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 at at ADV RB _ _ _ _ _ 10 least least ADV RBS Degree=Sup _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 part part NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 effect effect NOUN NN Number=Sing _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 as as SCONJ IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 DNA dna NOUN NN Number=Sing _ _ _ _ 24 binding bind VERB VBG VerbForm=Ger _ _ _ _ 25 activities activity NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappa kappa NOUN NN Number=Sing _ _ _ _ 34 B b NOUN NN Number=Sing _ _ _ _ 35 extracted extract VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 from from ADP IN _ _ _ _ _ 37 mitogen mitogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ _ 41 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 42 significantly significantly ADV RB _ _ _ _ _ 43 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 by by ADP IN _ _ _ _ _ 45 cysteamine cysteamine NOUN NN Number=Sing _ _ _ _ 46 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 2736 # text = Interestingly, Oct1 and NF-AT DNA binding activity were not affected by cysteamine treatment, suggesting that oxidative signalling processes operate in a selective manner. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Oct1 Oct1 PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 AT AT NOUN NN Number=Sing _ _ _ _ 8 DNA dna NOUN NN Number=Sing _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 cysteamine cysteamine NOUN NN Number=Sing _ _ _ _ 16 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 21 signalling signalling NOUN NN Number=Sing _ _ _ _ 22 processes process NOUN NNS Number=Plur _ _ _ _ 23 operate operate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 selective selective ADJ JJ Degree=Pos _ _ _ _ 27 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2737 # text = The identification of regulatory proteins, such as transcription factors, as molecular targets for oxidative signalling provides further evidence to implicate oxidative signalling as being intimately involved in the G0 to G1 phase transition in T lymphocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 identification identification NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 such such ADJ JJ Degree=Pos _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 as as SCONJ IN _ _ _ _ _ 13 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 14 targets target NOUN NNS Number=Plur _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 17 signalling signalling NOUN NN Number=Sing _ _ _ _ 18 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 further further ADJ JJ Degree=Pos _ _ _ _ 20 evidence evidence NOUN NN Number=Sing _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 implicate implicate VERB VB VerbForm=Inf _ _ _ _ 23 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 24 signalling signalling NOUN NN Number=Sing _ _ _ _ 25 as as SCONJ IN _ _ _ _ _ 26 being be AUX VBG VerbForm=Ger _ _ _ _ 27 intimately intimately ADV RB _ _ _ _ _ 28 involved involved ADJ JJ Degree=Pos _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 G0 G0 PROPN NNP Number=Sing _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 G1 G1 NUM CD NumType=Card _ _ _ _ 34 phase phase NOUN NN Number=Sing _ _ _ _ 35 transition transition NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 T t PROPN NNP Number=Sing _ _ _ _ 38 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2738 # text = Document 003003303 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003303 003003303 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2739 # text = Constitutively activated Jak-STAT pathway in T cells transformed with HTLV-I. 1 Constitutively Constitutively ADV RB _ _ _ _ _ 2 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 Jak Jak PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 STAT Stat PROPN NNP Number=Sing _ _ _ _ 6 pathway pathway NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2740 # text = Human T cell lymphotropic virus I (HTLV-I) is the etiological agent for adult T cell leukemia and tropical spastic paraparesis (also termed HTLV-I-associated myelopathy). 1 Human human PROPN NNP Number=Sing _ _ _ _ 2 T T PROPN NNP Number=Sing _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 lymphotropic lymphotropic NOUN NN Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 etiological etiological ADJ JJ Degree=Pos _ _ _ _ 15 agent agent NOUN NN Number=Sing _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 adult adult ADJ JJ Degree=Pos _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 tropical tropical ADJ JJ Degree=Pos _ _ _ _ 23 spastic spastic ADJ JJ Degree=Pos _ _ _ _ 24 paraparesis paraparesis NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 also also ADV RB _ _ _ _ _ 27 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 myelopathy myelopathy NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 2741 # text = HTLV-I-infected peripheral blood T cells exhibit an initial phase of interleukin-2 (IL-2)-dependent growth; over time, by an unknown mechanism, the cells become IL-2-independent. 1 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 4 - - PUNCT : _ _ _ _ SpaceAfter=No 5 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 7 blood blood NOUN NN Number=Sing _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 exhibit exhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 initial initial ADJ JJ Degree=Pos _ _ _ _ 13 phase phase NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 25 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ; ; PUNCT , _ _ _ _ _ 27 over over ADP IN _ _ _ _ _ 28 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 unknown unknown ADJ JJ Degree=Pos _ _ _ _ 33 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ _ 37 become become VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 independent. independent NOUN NN Number=Sing _ _ _ _ # sent_id = 2742 # text = Whereas the Jak kinases Jak1 and Jak3 and the signal transducer and activator of transcription proteins Stat3 and Stat5 are activated in normal T cells in response to IL-2, this signaling pathway was constitutively activated in HTLV-I-transformed cells. 1 Whereas whereas SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 Jak Jak PROPN NNP Number=Sing _ _ _ _ 4 kinases kinase PROPN NNPS Number=Plur _ _ _ _ 5 Jak1 Jak1 PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 Jak3 Jak3 NUM CD NumType=Card _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 signal signal ADJ JJ Degree=Pos _ _ _ _ 11 transducer transducer NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 activator activator NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 proteins protein NOUN NNS Number=Plur _ _ _ _ 17 Stat3 Stat3 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 Stat5 stat5 PROPN NNP Number=Sing _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 normal normal ADJ JJ Degree=Pos _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 response response NOUN NN Number=Sing _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 34 signaling signaling NOUN NN Number=Sing _ _ _ _ 35 pathway pathway NOUN NN Number=Sing _ _ _ _ 36 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 37 constitutively constitutively ADV RB _ _ _ _ _ 38 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT , _ _ _ _ SpaceAfter=No 42 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 2743 # text = In HTLV-I-infected cord blood lymphocytes, the transition from IL-2-dependent to IL-2-independent growth correlated with the acquisition of a constitutively activated Jak-STAT pathway, which suggests that this pathway participates in HTLV-I-mediated T cell transformation. 1 In in ADP IN _ _ _ _ _ 2 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 cord cord NOUN NN Number=Sing _ _ _ _ 8 blood blood NOUN NN Number=Sing _ _ _ _ 9 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 transition transition NOUN NN Number=Sing _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 independent independent ADJ JJ Degree=Pos _ _ _ _ 25 growth growth NOUN NN Number=Sing _ _ _ _ 26 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 acquisition acquisition NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 constitutively constitutively ADV RB _ _ _ _ _ 33 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 Jak Jak PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 STAT STAT PROPN NNP Number=Sing _ _ _ _ 37 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 which which PRON WDT PronType=Rel _ _ _ _ 40 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 41 that that SCONJ IN _ _ _ _ _ 42 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 43 pathway pathway NOUN NN Number=Sing _ _ _ _ 44 participates participate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT , _ _ _ _ SpaceAfter=No 48 I- I- SYM SYM _ _ _ _ SpaceAfter=No 49 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 T t PROPN NNP Number=Sing _ _ _ _ 51 cell cell NOUN NN Number=Sing _ _ _ _ 52 transformation transformation NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2744 # text = Document 003003306 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003306 003003306 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2745 # text = Characterization of a CD43/leukosialin-mediated pathway for inducing apoptosis in human T-lymphoblastoid cells. 1 Characterization Characterization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 CD43/leukosialin- Cd43/leukosialin- NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 pathway pathway NOUN NN Number=Sing _ _ _ _ 7 for for SCONJ IN _ _ _ _ _ 8 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 9 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 T- T- PUNCT , _ _ _ _ SpaceAfter=No 13 lymphoblastoid lymphoblastoid ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2746 # text = The monoclonal antibody (mAb) J393 induces apoptosis in Jurkat T-cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 3 antibody antibody NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 mAb mAb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 J393 J393 NUM CD NumType=Card _ _ _ _ 8 induces induce NOUN NNS Number=Plur _ _ _ _ 9 apoptosis apoptosis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 12 T- T- PUNCT , _ _ _ _ SpaceAfter=No 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 2747 # text = NH2-terminal amino acid sequence analysis identified the 140-kDa surface antigen for mAb J393 as CD43/leukosialin, the major sialoglycoprotein of leukocytes. 1 NH2 NH2 X LS _ _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 4 amino amino DET DT _ _ _ _ _ 5 acid acid ADJ JJ Degree=Pos _ _ _ _ 6 sequence sequence NOUN NN Number=Sing _ _ _ _ 7 analysis analysis NOUN NN Number=Sing _ _ _ _ 8 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 140 140 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kDa kDa NOUN NN Number=Sing _ _ _ _ 13 surface surface NOUN NN Number=Sing _ _ _ _ 14 antigen antigen NOUN NN Number=Sing _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 mAb mAb PROPN NNP Number=Sing _ _ _ _ 17 J393 J393 NUM CD NumType=Card _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 CD43 CD43 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 leukosialin leukosialin NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 major major ADJ JJ Degree=Pos _ _ _ _ 25 sialoglycoprotein sialoglycoprotein NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2748 # text = While Jurkat cells co-expressed two discrete cell-surface isoforms of CD43, recognized by mAb J393 and mAb G10-2, respectively, only J393/CD43 signaled apoptosis. 1 While while SCONJ IN _ _ _ _ _ 2 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 co-expressed co-express VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 two two NUM CD NumType=Card _ _ _ _ 6 discrete discrete NOUN NN Number=Sing _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 -surface -surface NOUN NN Number=Sing _ _ _ _ 9 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 CD43 CD43 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 recognized recognize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 mAb mAb PROPN NNP Number=Sing _ _ _ _ 16 J393 J393 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 mAb mAb PROPN NNP Number=Sing _ _ _ _ 19 G10 G10 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 only only ADV RB _ _ _ _ _ 26 J393/CD43 J393/CD43 NUM CD NumType=Card _ _ _ _ 27 signaled signale VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2749 # text = J393/CD43 was found to be hyposialylated, bearing predominantly O-linked monosaccharide glycans, whereas G10-2/CD43 bore complex sialylated tetra- and hexasaccharide chains. 1 J393/CD43 J393/CD43 NOUN NN Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 hyposialylated hyposialylate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 bearing bear VERB VBG VerbForm=Ger _ _ _ _ 9 predominantly predominantly ADV RB _ _ _ _ _ 10 O- O- PUNCT : _ _ _ _ SpaceAfter=No 11 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 monosaccharide monosaccharide NOUN NN Number=Sing _ _ _ _ 13 glycans glycan NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 whereas whereas SCONJ IN _ _ _ _ _ 16 G10-2/CD43 G10-2/CD43 NUM CD NumType=Card _ _ _ _ 17 bore bore NOUN NN Number=Sing _ _ _ _ 18 complex complex SYM SYM _ _ _ _ _ 19 sialylated sialylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 tetra tetra NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 hexasaccharide hexasaccharide NOUN NN Number=Sing _ _ _ _ 24 chains chain NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2750 # text = Treatment with soluble, bivalent mAb J393 killed 25-50% of the cell population, while concomitant engagement of either the CD3.TcR complex or the integrins CD18 and CD29 significantly potentiated this effect. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 soluble soluble ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 bivalent bivalent ADJ JJ Degree=Pos _ _ _ _ 6 mAb mAb PROPN NNP Number=Sing _ _ _ _ 7 J393 J393 NUM CD NumType=Card _ _ _ _ 8 killed kill VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 25 25 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - SYM SYM _ _ _ _ SpaceAfter=No 11 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 % % SYM NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 population population NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 while while SCONJ IN _ _ _ _ _ 19 concomitant concomitant ADJ JJ Degree=Pos _ _ _ _ 20 engagement engagement NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 either either CCONJ CC _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 CD3.TcR Cd3.tcr NOUN NN Number=Sing _ _ _ _ 25 complex complex NOUN NN Number=Sing _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 integrins integrin PROPN NNPS Number=Plur _ _ _ _ 29 CD18 CD18 PROPN NNP Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 CD29 CD29 PROPN NNP Number=Sing _ _ _ _ 32 significantly significantly ADV RB _ _ _ _ _ 33 potentiated potentiate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 35 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 2751 # text = Treatment of Jurkat cells with mAb J393 induced tyrosine phosphorylation of specific protein substrates that underwent hyperphosphorylation upon antigen receptor costimulation. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 mAb mAb PROPN NNP Number=Sing _ _ _ _ 7 J393 J393 NUM CD NumType=Card _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 10 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 substrates substrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 16 underwent underwent ADJ JJ Degree=Pos _ _ _ _ 17 hyperphosphorylation hyperphosphorylation NOUN NN Number=Sing _ _ _ _ 18 upon upon ADP IN _ _ _ _ _ 19 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ _ 21 costimulation costimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2752 # text = Tyrosine kinase inhibition by herbimycin A diminished J393/CD43-mediated apoptosis, whereas inhibition of phosphotyrosine phosphatase activity by bis(maltolato)oxovanadium-IV enhanced cell death. 1 Tyrosine Tyrosine NOUN NN Number=Sing _ _ _ _ 2 kinase kinase NOUN NN Number=Sing _ _ _ _ 3 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 herbimycin herbimycin NOUN NN Number=Sing _ _ _ _ 6 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 diminished diminish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 J393/CD43 J393/CD43 NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 whereas whereas SCONJ IN _ _ _ _ _ 14 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 phosphotyrosine phosphotyrosine NOUN NN Number=Sing _ _ _ _ 17 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 bis bis NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 maltolato maltolato NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 oxovanadium oxovanadium NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 IV iv NOUN NN Number=Sing _ _ _ _ 27 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2753 # text = Signal transduction through tyrosine kinase activation may lead to altered gene expression, as J393/CD43 ligation prompted decreases in the nuclear localization of the transcriptional regulatory protein NF-kappaB and proteins binding the interferon-inducible regulatory element. 1 Signal signal ADJ JJ Degree=Pos _ _ _ _ 2 transduction transduction NOUN NN Number=Sing _ _ _ _ 3 through through ADP IN _ _ _ _ _ 4 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 may may AUX MD VerbForm=Fin _ _ _ _ 8 lead lead VERB VB VerbForm=Inf _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 altered alter VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 as as SCONJ IN _ _ _ _ _ 15 J393/CD43 J393/CD43 NUM CD NumType=Card _ _ _ _ 16 ligation ligation NOUN NN Number=Sing _ _ _ _ 17 prompted prompt VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 decreases decrease NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 22 localization localization NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 26 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 27 protein protein NOUN NN Number=Sing _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 proteins protein NOUN NNS Number=Plur _ _ _ _ 33 binding bind VERB VBG VerbForm=Ger _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 38 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 39 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 2754 # text = Since peripheral blood T-lymphocytes express cryptic epitopes for mAb J393, these findings demonstrate the existence of a tightly regulated CD43-mediated pathway for inducing apoptosis in human T-cell lineages. 1 Since since ADP IN _ _ _ _ _ 2 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 3 blood blood NOUN NN Number=Sing _ _ _ _ 4 T- T- PUNCT : _ _ _ _ SpaceAfter=No 5 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 6 express express ADJ JJ Degree=Pos _ _ _ _ 7 cryptic cryptic ADJ JJ Degree=Pos _ _ _ _ 8 epitopes epitope NOUN NNS Number=Plur _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 mAb mAb PROPN NNP Number=Sing _ _ _ _ 11 J393 J393 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 14 findings finding NOUN NNS Number=Plur _ _ _ _ 15 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 existence existence NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 tightly tightly ADV RB _ _ _ _ _ 21 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 CD43 CD43 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 pathway pathway NOUN NN Number=Sing _ _ _ _ 26 for for SCONJ IN _ _ _ _ _ 27 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 28 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2755 # text = Document 003003307 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003307 003003307 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2756 # text = 1,25-Dihydroxyvitamin D3 induces differentiation of a retinoic acid-resistant acute promyelocytic leukemia cell line (UF-1) associated with expression of p21(WAF1/CIP1) and p27(KIP1). 1 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 Dihydroxyvitamin Dihydroxyvitamin NOUN NN Number=Sing _ _ _ _ 4 D3 D3 NUM CD NumType=Card _ _ _ _ 5 induces induce NOUN NNS Number=Plur _ _ _ _ 6 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 10 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 resistant resistant NOUN NN Number=Sing _ _ _ _ 13 acute acute NOUN NN Number=Sing _ _ _ _ 14 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ _ 15 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 line line NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 UF UF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 1 1 X LS _ _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 p21 p21 NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 WAF1/CIP1 WAF1/CIP1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 p27 p27 NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 KIP1 KIP1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2757 # text = Retinoic acid (RA) resistance is a serious problem for patients with acute promyelocytic leukemia (APL) who are receiving all-trans RA. 1 Retinoic Retinoic ADJ JJ Degree=Pos _ _ _ _ 2 acid acid NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 RA RA X AFX _ _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 resistance resistance NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 serious serious ADJ JJ Degree=Pos _ _ _ _ 10 problem problem NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 patients patient NOUN NNS Number=Plur _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 acute acute ADJ JJ Degree=Pos _ _ _ _ 15 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ _ 16 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 APL APL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 who who PRON WP PronType=Rel _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 receiving receive VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 23 all all DET DT _ _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 trans tran NOUN NNS Number=Plur _ _ _ _ 26 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2758 # text = However, the mechanisms and strategies to overcome RA resistance by APL cells are still unclear. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 strategies strategy NOUN NNS Number=Plur _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 overcome overcome VERB VB VerbForm=Inf _ _ _ _ 9 RA RA PROPN NNP Number=Sing _ _ _ _ 10 resistance resistance NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 APL Apl ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 still still ADV RB _ _ _ _ _ 16 unclear unclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2759 # text = The biologic effects of RA are mediated by two distinct families of transcriptional factors: 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 biologic biologic NOUN NN Number=Sing _ _ _ _ 3 effects effect NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 RA Ra NOUN NN Number=Sing _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 two two NUM CD NumType=Card _ _ _ _ 10 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 11 families family NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 14 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 : : PUNCT : _ _ _ _ _ # sent_id = 2760 # text = RA receptors (RARs) and retinoid X receptors (RXRs). 1 RA Ra NOUN NN Number=Sing _ _ _ _ 2 receptors receptor NOUN NNS Number=Plur _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 RARs RAR NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 retinoid retinoid VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 X x ADJ JJ Degree=Pos _ _ _ _ 9 receptors receptor NOUN NNS Number=Plur _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 RXRs RXR NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 2761 # text = RXRs heterodimerize with 1, 25-dihydroxyvitamin D3 [1,25(OH)2D3] receptor (VDR), enabling their efficient transcriptional activation. 1 RXRs RXR NOUN NNS Number=Plur _ _ _ _ 2 heterodimerize heterodimerize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 25 25 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 dihydroxyvitamin dihydroxyvitamin NOUN NN Number=Sing _ _ _ _ 9 D3 D3 NOUN NN Number=Sing _ _ _ _ 10 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 OH oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 2D3 2D3 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ] ] PUNCT -RRB- _ _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 VDR VDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 enabling enable VERB VBG VerbForm=Ger _ _ _ _ 23 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 25 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2762 # text = The cyclin-dependent kinase (cdk) inhibitor p21(WAF1/CIP1) has a vitamin D3-responsive element (VDRE) in its promoter, and 1,25(OH)2D3 enhances the expression of p21(WAF1/CIP1) and induces differentiation of selected myeloid leukemic cell lines. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cyclin cyclin NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 cdk cdk NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 10 p21 p21 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 WAF1/CIP1 Waf1/cip1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 vitamin vitamin NOUN NN Number=Sing _ _ _ _ 17 D3 D3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 20 element element NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 VDRE VDRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 26 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 2D3 2D3 NUM CD NumType=Card _ _ _ _ 34 enhances enhance NOUN NNS Number=Plur _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 p21 p21 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 WAF1/CIP1 Waf1/cip1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 induces induce NOUN NNS Number=Plur _ _ _ _ 44 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 selected selected ADJ JJ Degree=Pos _ _ _ _ 47 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 48 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 49 cell cell NOUN NN Number=Sing _ _ _ _ 50 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 2763 # text = We have recently established a novel APL cell line (UF-1) with features of RA resistance. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 recently recently ADV RB _ _ _ _ _ 4 established establish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 novel novel NOUN NN Number=Sing _ _ _ _ 7 APL Apl NOUN NN Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 line line NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 UF UF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 X LS _ _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 features feature NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 RA RA PROPN NNP Number=Sing _ _ _ _ 19 resistance resistance NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2764 # text = 1,25(OH)2D3 can induce growth inhibition and G1 arrest of UF-1 cells, resulting in differentiation of these cells toward granulocytes. 1 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 OH oh INTJ UH _ _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 5 2D3 2D3 NOUN NN Number=Sing _ _ _ _ 6 can can AUX MD VerbForm=Fin _ _ _ _ 7 induce induce VERB VB VerbForm=Inf _ _ _ _ 8 growth growth NOUN NN Number=Sing _ _ _ _ 9 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 G1 G1 NUM CD NumType=Card _ _ _ _ 12 arrest arrest NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 UF UF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 resulting result VERB VBG VerbForm=Ger _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 toward toward ADP IN _ _ _ _ _ 26 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2765 # text = This 1, 25(OH)2D3-induced G1 arrest is enhanced by all-trans RA. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 25 25 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 2D3 2D3 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 G1 g1 NOUN NN Number=Sing _ _ _ _ 12 arrest arrest NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 all all DET DT _ _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 trans tran NOUN NNS Number=Plur _ _ _ _ 19 RA Ra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2766 # text = Also, 1, 25(OH)2D3 (10(-10) to 10(-7) mol/L) in combination with RA markedly inhibits cellular proliferation in a dose- and time-dependent manner. 1 Also also ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 25 25 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 2D3 2D3 NUM CD NumType=Card _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 (-10 (-10 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 (- (- PUNCT . _ _ _ _ SpaceAfter=No 17 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 mol/L mol/l NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 combination combination NOUN NN Number=Sing _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 RA RA PROPN NNP Number=Sing _ _ _ _ 25 markedly markedly ADV RB _ _ _ _ _ 26 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 28 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 37 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 2767 # text = Associated with these findings, the levels of p21(WAF1/CIP1) and p27(KIP1) mRNA and protein increased in these cells. 1 Associated Associated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 findings findings NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 levels level NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 p21 p21 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 WAF1/CIP1 WAF1/CIP1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 p27 p27 NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 KIP1 KIP1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2768 # text = Northern blot analysis showed that p21(WAF1/CIP1) and p27(KIP1) mRNA and protein increased in these cells. 1 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 p21 p21 NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 WAF1/CIP1 WAF1/CIP1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 p27 p27 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 KIP1 KIP1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2769 # text = Northern blot analysis showed that p21(WAF1/CIP1) and p27(KIP1) transcripts were induced after 6 hours' exposure to 1,25(OH)2D3 and then decreased to basal levels over 48 hours. 1 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 p21 p21 NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 WAF1/CIP1 WAF1/CIP1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 p27 p27 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 KIP1 KIP1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 after after ADP IN _ _ _ _ _ 19 6 6 NUM CD NumType=Card _ _ _ _ 20 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 ' 's PART POS _ _ _ _ _ 22 exposure exposure NOUN NN Number=Sing _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 OH oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 2D3 2D3 NUM CD NumType=Card _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 then then ADV RB PronType=Dem _ _ _ _ 31 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 basal basal ADJ JJ Degree=Pos _ _ _ _ 34 levels level NOUN NNS Number=Plur _ _ _ _ 35 over over ADP IN _ _ _ _ _ 36 48 48 NUM CD NumType=Card _ _ _ _ 37 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 2770 # text = Western blot experiments showed that p21(WAF1/CIP1) protein levels increased and became detectable after 12 hours of 1,25(OH)2D3 treatment and induction of p27(KIP1) protein was much more gradual and sustained in UF-1 cells. 1 Western western ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ _ 4 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 p21 p21 NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 WAF1/CIP1 WAF1/CIP1 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ _ 12 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 became become VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 16 after after ADP IN _ _ _ _ _ 17 12 12 NUM CD NumType=Card _ _ _ _ 18 hours hour NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 OH oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 2D3 2D3 NUM CD NumType=Card _ _ _ _ 25 treatment treatment NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 induction induction NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 p27 p27 NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 KIP1 KIP1 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 protein protein NOUN NN Number=Sing _ _ _ _ 34 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 35 much much ADV RB _ _ _ _ _ 36 more more ADJ JJR Degree=Cmp _ _ _ _ 37 gradual gradual NOUN NN Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 sustained sustain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 UF UF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT , _ _ _ _ SpaceAfter=No 43 1 1 NUM CD NumType=Card _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 2771 # text = Interestingly, the combination of 1, 25(OH)2D3 and RA markedly enhanced the levels of p27(KIP1) transcript and protein as compared with levels induced by 1, 25(OH)2D3 alone. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 combination combination NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 25 25 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 2D3 2D3 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 RA RA PROPN NNP Number=Sing _ _ _ _ 15 markedly markedly ADV RB _ _ _ _ _ 16 enhanced enhance VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 levels level NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 p27 p27 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 KIP1 KIP1 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 transcript transcript NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ _ 27 as as SCONJ IN _ _ _ _ _ 28 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 levels level NOUN NNS Number=Plur _ _ _ _ 31 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 25 25 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 2D3 2D3 NUM CD NumType=Card _ _ _ _ 40 alone alone ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 2772 # text = In addition, exogenous p27(KIP1) expression can enhance the level of CD11b antigen in myeloid leukemic cells. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 5 p27 p27 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 KIP1 KIP1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 can can AUX MD VerbForm=Fin _ _ _ _ 11 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 level level NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 11 11 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 b b NOUN NN Number=Sing _ _ _ _ 18 antigen antigen NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 21 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2773 # text = In contrast, RA alone can induce G1 arrest of UF-1 cells; however, it did not result in an increase of p21(WAF1/CIP1) and p27(KIP1) transcript and protein expression in RA-resistant cells. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 RA RA PROPN NNP Number=Sing _ _ _ _ 5 alone alone ADV RB _ _ _ _ _ 6 can can AUX MD VerbForm=Fin _ _ _ _ 7 induce induce VERB VB VerbForm=Inf _ _ _ _ 8 G1 G1 NUM CD NumType=Card _ _ _ _ 9 arrest arrest NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 UF UF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 ; ; PUNCT , _ _ _ _ _ 16 however however ADV RB _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 19 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 result result VERB VB VerbForm=Inf _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 increase increase NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 p21 p21 NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 WAF1/CIP1 Waf1/cip1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 p27( p27( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 KIP1 KIP1 X LS _ _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 transcript transcript NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 protein protein NOUN NN Number=Sing _ _ _ _ 37 expression expression NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 42 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 2774 # text = Taken together, we conclude that 1,25(OH)2D3 induces increased expression of cdk inhibitors, which mediates a G1 arrest, and this may be associated with differentiation of RA-resistant UF-1 cells toward mature granulocytes. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 2D3 2D3 NUM CD NumType=Card _ _ _ _ 12 induces induce NOUN NNS Number=Plur _ _ _ _ 13 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 cdk cdk NOUN NN Number=Sing _ _ _ _ 17 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 G1 G1 NUM CD NumType=Card _ _ _ _ 23 arrest arrest NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 27 may may AUX MD VerbForm=Fin _ _ _ _ 28 be be AUX VB VerbForm=Inf _ _ _ _ 29 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 resistant resistant NOUN NN Number=Sing _ _ _ _ 36 UF Uf NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT , _ _ _ _ SpaceAfter=No 38 1 1 NUM CD NumType=Card _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ _ 40 toward toward ADP IN _ _ _ _ _ 41 mature mature ADJ JJ Degree=Pos _ _ _ _ 42 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2775 # text = Document 003003314 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003314 003003314 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2776 # text = Effects of interleukin-10 on human peripheral blood mononuclear cell responses to Cryptococcus neoformans, Candida albicans, and lipopolysaccharide. 1 Effects Effects NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 10 10 NUM CD NumType=Card _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 9 blood blood NOUN NN Number=Sing _ _ _ _ 10 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 responses response NOUN NNS Number=Plur _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 Cryptococcus Cryptococcus PROPN NNP Number=Sing _ _ _ _ 15 neoformans neoforman NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 Candida Candida PROPN NNP Number=Sing _ _ _ _ 18 albicans albican PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2777 # text = Deactivation of mononuclear phagocytes is critical to limit the inflammatory response but can be detrimental in the face of progressive infection. 1 Deactivation Deactivation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 4 phagocytes phagocyte NOUN NNS Number=Plur _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 critical critical ADJ JJ Degree=Pos _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 limit limit VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 11 response response NOUN NN Number=Sing _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 can can AUX MD VerbForm=Fin _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 detrimental detrimental ADJ JJ Degree=Pos _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 face face NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 progressive progressive ADJ JJ Degree=Pos _ _ _ _ 21 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2778 # text = We compared the effects of the deactivating cytokine interleukin 10 (IL-10) on human peripheral blood mononuclear cell (PBMC) responses to lipopolysaccharide (LPS), Cryptococcus neoformans, and Candida albicans. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 compared compare VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effects effect NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 deactivating deactivat VERB VBG VerbForm=Ger _ _ _ _ 8 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 9 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 10 10 10 NUM CD NumType=Card _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 19 blood blood NOUN NN Number=Sing _ _ _ _ 20 mononuclear mononuclear NOUN NN Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 PBMC Pbmc NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 responses response NOUN NNS Number=Plur _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 LPS Lp INTJ UH _ _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 Cryptococcus Cryptococcus PROPN NNP Number=Sing _ _ _ _ 33 neoformans neoforman NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 Candida Candida PROPN NNP Number=Sing _ _ _ _ 37 albicans albicans PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 2779 # text = IL-10 effected dose-dependent inhibition of tumor necrosis factor alpha (TNF-alpha) release in PBMC stimulated by LPS and C. neoformans, with significant inhibition seen with 0.1 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 effected effect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 8 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 tumor tumor NOUN NN Number=Sing _ _ _ _ 11 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 release release NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 PBMC PBMC PROPN NNP Number=Sing _ _ _ _ 22 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 LPS LPS PROPN NNP Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 C. c. PROPN NNP Number=Sing _ _ _ _ 27 neoformans neoforman PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 significant significant ADJ JJ Degree=Pos _ _ _ _ 31 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 32 seen see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 0.1 0.1 NUM CD NumType=Card _ _ _ _ # sent_id = 2780 # text = U/ml and greater than 90% inhibition noted with 10 U/ml. 1 U/ U/ SYM NFP _ _ _ _ SpaceAfter=No 2 ml ml NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 greater greater ADJ JJR Degree=Cmp _ _ _ _ 5 than than ADP IN _ _ _ _ _ 6 90 90 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 % % SYM NN Number=Sing _ _ _ _ 8 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 9 noted note VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 10 10 NUM CD NumType=Card _ _ _ _ 12 U/ U/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ml ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 2781 # text = In contrast, even at doses as high as 100 U/ml, IL-10 inhibited TNF-alpha release in response to C. albicans by only 50%. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 even even ADV RB _ _ _ _ _ 5 at at ADP IN _ _ _ _ _ 6 doses dos NOUN NNS Number=Plur _ _ _ _ 7 as as ADV RB _ _ _ _ _ 8 high high ADJ JJ Degree=Pos _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 100 100 NUM CD NumType=Card _ _ _ _ 11 U/ U/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ml ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 10 10 NUM CD NumType=Card _ _ _ _ 17 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 alpha alpha NOUN NN Number=Sing _ _ _ _ 21 release release NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 C. c. PROPN NNP Number=Sing _ _ _ _ 26 albicans albicans PROPN NNPS Number=Plur _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 only only ADV RB _ _ _ _ _ 29 50% 50% SYM NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2782 # text = IL-10 profoundly inhibited release of IL-1beta from PBMC stimulated by all three stimuli. 1 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - SYM SYM _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 profoundly profoundly ADV RB _ _ _ _ _ 5 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 release release NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 beta beta NOUN NN Number=Sing _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 PBMC PBMC PROPN NNP Number=Sing _ _ _ _ 14 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 all all DET DT _ _ _ _ _ 17 three three NUM CD NumType=Card _ _ _ _ 18 stimuli stimuli NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2783 # text = TNF-alpha mRNA and release was inhibited even if IL-10 was added up to 8 h after cryptococcal stimulation. 1 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 alpha alpha NOUN NN Number=Sing _ _ _ _ 4 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 release release NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 even even ADV RB _ _ _ _ _ 10 if if SCONJ IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 10 10 NUM CD NumType=Card _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 added add VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 up up ADP RP _ _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 8 8 NUM CD NumType=Card _ _ _ _ 19 h h NOUN NN Number=Sing _ _ _ _ 20 after after ADP IN _ _ _ _ _ 21 cryptococcal cryptococcal ADJ JJ Degree=Pos _ _ _ _ 22 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2784 # text = In contrast, inhibition of IL-1 beta mRNA was of lesser magnitude and occurred only when IL-10 was added within 2 h of cryptococcal stimulation. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 beta beta NOUN NN Number=Sing _ _ _ _ 10 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 lesser lesser ADJ JJR Degree=Cmp _ _ _ _ 14 magnitude magnitude NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 only only ADV RB _ _ _ _ _ 18 when when ADV WRB PronType=Int _ _ _ _ 19 IL IL SYM $ _ _ _ _ SpaceAfter=No 20 - - SYM SYM _ _ _ _ SpaceAfter=No 21 10 10 NUM CD NumType=Card _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 added add VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 within within ADP IN _ _ _ _ _ 25 2 2 NUM CD NumType=Card _ _ _ _ 26 h h NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 cryptococcal cryptococcal ADJ JJ Degree=Pos _ _ _ _ 29 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2785 # text = IL-10 inhibited translocation of NF-kappaB in response to LPS but not the fungal stimuli. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 translocation translocation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 response response NOUN NN Number=Sing _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 LPS LPS PROPN NNP Number=Sing _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 fungal fungal ADJ JJ Degree=Pos _ _ _ _ 18 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2786 # text = All three stimuli induced IL-10 production in PBMC, although over 10-fold less IL-10 was released in response to C. neoformans compared with LPS and C. 1 All all DET DT _ _ _ _ _ 2 three three NUM CD NumType=Card _ _ _ _ 3 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 10 10 NUM CD NumType=Card _ _ _ _ 8 production production NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 PBMC PBMC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 although although SCONJ IN _ _ _ _ _ 13 over over ADP IN _ _ _ _ _ 14 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 fold fold NOUN NN Number=Sing _ _ _ _ 17 less less ADV RBR Degree=Cmp _ _ _ _ 18 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - SYM SYM _ _ _ _ SpaceAfter=No 20 10 10 NUM CD NumType=Card _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 released release VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 response response NOUN NN Number=Sing _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 C. c. PROPN NNP Number=Sing _ _ _ _ 27 neoformans neoforman NOUN NNS Number=Plur _ _ _ _ 28 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 LPS LPS PROPN NNP Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 C. c. PROPN NNP Number=Sing _ _ _ _ # sent_id = 2787 # text = albicans. 1 albicans albican NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ # sent_id = 2788 # text = Thus, while IL-10 has deactivating effects on PBMC responses to all three stimuli, disparate stimulus- and response-specific patterns of deactivation are seen. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 while while SCONJ IN _ _ _ _ _ 4 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 10 10 NUM CD NumType=Card _ _ _ _ 7 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 deactivating deactivat VERB VBG VerbForm=Ger _ _ _ _ 9 effects effect NOUN NNS Number=Plur _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 PBMC Pbmc NOUN NN Number=Sing _ _ _ _ 12 responses response NOUN NNS Number=Plur _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 all all DET DT _ _ _ _ _ 15 three three NUM CD NumType=Card _ _ _ _ 16 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 disparate disparate ADJ JJ Degree=Pos _ _ _ _ 19 stimulus stimulus NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 patterns pattern NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 deactivation deactivation NOUN NN Number=Sing _ _ _ _ 28 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2789 # text = Inhibition by IL-10 of proinflammatory cytokine release appears to occur at the level of gene transcription for TNF-alpha and both transcriptionally and posttranscriptionally for IL-1beta. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 by by ADP IN _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 10 10 NUM CD NumType=Card _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 8 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 9 release release NOUN NN Number=Sing _ _ _ _ 10 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 occur occur VERB VB VerbForm=Inf _ _ _ _ 13 at at ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 level level NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 alpha alpha NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 both both CCONJ CC _ _ _ _ _ 25 transcriptionally transcriptionally ADV RB _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 posttranscriptionally posttranscriptionally ADV RB _ _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2790 # text = Document 003003316 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003316 003003316 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2791 # text = The zinc finger transcription factor Egr-1 is essential for and restricts differentiation along the macrophage lineage. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 zinc zinc NOUN NN Number=Sing _ _ _ _ 3 finger finger NOUN NN Number=Sing _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 essential essential ADJ JJ Degree=Pos _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 restricts restrict NOUN NNS Number=Plur _ _ _ _ 14 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 15 along along ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 18 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2792 # text = We have isolated cDNA clones of myeloid differentiation primary response (MyD) genes, activated in the absence of de novo protein synthesis following induction for differentiation along either the macrophage or granulocyte lineage in human myeloblastic leukemia HL-60 cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 5 clones clone NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 8 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 9 primary primary ADJ JJ Degree=Pos _ _ _ _ 10 response response NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 MyD myd NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 absence absence NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 de de PROPN NNP Number=Sing _ _ _ _ 22 novo novo PROPN NNP Number=Sing _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ _ 24 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 25 following follow VERB VBG VerbForm=Ger _ _ _ _ 26 induction induction NOUN NN Number=Sing _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 29 along along ADP IN _ _ _ _ _ 30 either either CCONJ CC _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 33 or or CCONJ CC _ _ _ _ _ 34 granulocyte granulocyte NOUN NN Number=Sing _ _ _ _ 35 lineage lineage NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 human human ADJ JJ Degree=Pos _ _ _ _ 38 myeloblastic myeloblastic ADJ JJ Degree=Pos _ _ _ _ 39 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 40 HL Hl NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT , _ _ _ _ SpaceAfter=No 42 60 60 NUM CD NumType=Card _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 2793 # text = One cDNA clone of a primary response gene, expressed upon macrophage differentiation, encoded for Egr-1, a zinc finger transcription factor. 1 One one NUM CD NumType=Card _ _ _ _ 2 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 3 clone clone NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 primary primary ADJ JJ Degree=Pos _ _ _ _ 7 response response NOUN NN Number=Sing _ _ _ _ 8 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 upon upon ADP IN _ _ _ _ _ 12 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 13 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 encoded encode VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 zinc zinc NOUN NN Number=Sing _ _ _ _ 22 finger finger NOUN NN Number=Sing _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2794 # text = The Egr-1 gene was observed to be transcriptionally silent in HL-60 cells, but active in U-937 and M1 cells, the latter two being predetermined for macrophage differentiation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Egr Egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 -1 -1 NUM CD NumType=Card _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 transcriptionally transcriptionally ADV RB _ _ _ _ _ 10 silent silent ADJ JJ Degree=Pos _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 60 60 NUM CD NumType=Card _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 active active ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 937 937 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 M1 M1 NUM CD NumType=Card _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 latter latter ADJ JJ Degree=Pos _ _ _ _ 29 two two NUM CD NumType=Card _ _ _ _ 30 being be AUX VBG VerbForm=Ger _ _ _ _ 31 predetermined predetermine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 34 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 2795 # text = Egr-1 antisense oligomers in the culture media blocked macrophage differentiation in both myeloid leukemia cell lines and normal myeloblasts. 1 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -1 -1 NUM CD NumType=Card _ _ _ _ 3 antisense antisense ADJ JJ Degree=Pos _ _ _ _ 4 oligomers oligomer NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 culture culture NOUN NN Number=Sing _ _ _ _ 8 media media NOUN NN Number=Sing _ _ _ _ 9 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 11 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 both both DET DT _ _ _ _ _ 14 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 15 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 lines line NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 normal normal ADJ JJ Degree=Pos _ _ _ _ 20 myeloblasts myeloblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2796 # text = HL-60 cells constitutively expressing an Egr-1 transgene (HL-60Egr-1) could be induced for macrophage, but not granulocyte, differentiation. 1 HL Hl INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 60 60 NUM CD NumType=Card _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 constitutively constitutively ADV RB _ _ _ _ _ 6 expressing express VERB VBG VerbForm=Ger _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 -1 -1 NUM CD NumType=Card _ _ _ _ 10 transgene transgene NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 HL- HL- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 60Egr 60Egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1 1 X LS _ _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 could could AUX MD VerbForm=Fin _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 macrophage macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 but but CCONJ CC _ _ _ _ _ 24 not not ADV RB _ _ _ _ _ 25 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2797 # text = These observations indicate that expression of Egr-1 is essential for and restricts differentiation of myeloblasts along the macrophage lineage. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 -1 -1 NUM CD NumType=Card _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 essential essential ADJ JJ Degree=Pos _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 restricts restrict NOUN NNS Number=Plur _ _ _ _ 14 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 myeloblasts myeloblast NOUN NNS Number=Plur _ _ _ _ 17 along along ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 20 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2798 # text = Document 003003321 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003321 003003321 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2799 # text = [Glucocorticoid receptors on human peripheral mononuclear and polymorphonuclear leucocytes: changes in patients with yang-deficiency] 1 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 Glucocorticoid Glucocorticoid VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 3 receptors receptor NOUN NNS Number=Plur _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 7 mononuclear mononuclear NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 polymorphonuclear polymorphonuclear ADJ JJ Degree=Pos _ _ _ _ 10 leucocytes leucocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 : : PUNCT : _ _ _ _ _ 12 changes change NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 patients patient NOUN NNS Number=Plur _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 yang yang NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 deficiency deficiency NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 2800 # text = It was found that, in former works, the glucocorticoid receptors (GCR) on peripheral mixed leucocytes in patients with Yang-deficiency were decreased. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that SCONJ IN _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 former former ADJ JJ Degree=Pos _ _ _ _ 8 works work NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 12 receptors receptor NOUN NNS Number=Plur _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 GCR GCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 18 mixed mix ADJ JJ Degree=Pos _ _ _ _ 19 leucocytes leucocyte NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 patients patient NOUN NNS Number=Plur _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 Yang Yang PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 deficiency deficiency NOUN NN Number=Sing _ _ _ _ 26 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2801 # text = In this work, the mixed leucocytes were further separated into mononuclear (MNL) and polymorphonuclear (PML) leucocytes, and GCR were determined in each part of leucocytes. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 work work NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 mixed mixed ADJ JJ Degree=Pos _ _ _ _ 7 leucocytes leucocyte NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 further further ADV RB _ _ _ _ _ 10 separated separate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 into into ADP IN _ _ _ _ _ 12 mononuclear mononuclear NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 MNL MNL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 polymorphonuclear polymorphonuclear NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 PML pMl NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 leucocytes leucocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 GCR GCR ADV RBR Degree=Cmp _ _ _ _ 25 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 each each DET DT _ _ _ _ _ 29 part part NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 leucocytes leucocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2802 # text = GCR on MNL and PML in 6 Yang deficient patients were 3473 +/- 413 and 4433 +/- 651 sites/cell respectively, statistically significant from the normal control group (4462 +/- 962 and 5622 +/- 782 sites/cell respectively, P less than 0.05). 1 GCR Gcr VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 on on ADP IN _ _ _ _ _ 3 MNL MNL NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 PML PML NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 6 6 NUM CD NumType=Card _ _ _ _ 8 Yang Yang PROPN NNP Number=Sing _ _ _ _ 9 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 10 patients patient NOUN NNS Number=Plur _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 3473 3473 NUM CD NumType=Card _ _ _ _ 13 +/- +/- SYM SYM _ _ _ _ _ 14 413 413 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 4433 4433 NUM CD NumType=Card _ _ _ _ 17 +/- +/- SYM SYM _ _ _ _ _ 18 651 651 NUM CD NumType=Card _ _ _ _ 19 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 cell cell VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 22 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 statistically statistically ADV RB _ _ _ _ _ 25 significant significant ADJ JJ Degree=Pos _ _ _ _ 26 from from ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 normal normal ADJ JJ Degree=Pos _ _ _ _ 29 control control NOUN NN Number=Sing _ _ _ _ 30 group group NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 4462 4462 NUM CD NumType=Card _ _ _ _ 33 +/- +/- SYM SYM _ _ _ _ _ 34 962 962 NUM CD NumType=Card _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 5622 5622 NUM CD NumType=Card _ _ _ _ 37 +/- +/- SYM SYM _ _ _ _ _ 38 782 782 NUM CD NumType=Card _ _ _ _ 39 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 / / PUNCT , _ _ _ _ SpaceAfter=No 41 cell cell VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 42 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 P p VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 45 less less ADJ JJR Degree=Cmp _ _ _ _ 46 than than ADP IN _ _ _ _ _ 47 0.05 0.05 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 2803 # text = GCR on MNL, PML and mixed leucocytes in 5 patients were determined simultaneously, and all lowered from the control group. 1 GCR Gcr VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 on on ADP IN _ _ _ _ _ 3 MNL MNL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 PML PML PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 mixed mix ADJ JJ Degree=Pos _ _ _ _ 8 leucocytes leucocyte NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 5 5 NUM CD NumType=Card _ _ _ _ 11 patients patient NOUN NNS Number=Plur _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 simultaneously simultaneously ADV RB _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 all all ADV RB _ _ _ _ _ 18 lowered lower VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 control control NOUN NN Number=Sing _ _ _ _ 22 group group NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2804 # text = The results were 3369 +/- 370, 4986 +/- 419 and 4524 +/- 852 sites/cell respectively, with the lowest GCR on MNL and highest on PML. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 3369 3369 NUM CD NumType=Card _ _ _ _ 5 +/- +/- SYM SYM _ _ _ _ _ 6 370 370 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 4986 4986 NUM CD NumType=Card _ _ _ _ 9 +/- +/- SYM SYM _ _ _ _ _ 10 419 419 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 4524 4524 NUM CD NumType=Card _ _ _ _ 13 +/- +/- SYM SYM _ _ _ _ _ 14 852 852 NUM CD NumType=Card _ _ _ _ 15 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 / / PUNCT , _ _ _ _ SpaceAfter=No 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 lowest lowest ADJ JJS Degree=Sup _ _ _ _ 23 GCR Gcr PROPN NNP Number=Sing _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 MNL MNL PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 highest highest ADJ JJS Degree=Sup _ _ _ _ 28 on on ADP IN _ _ _ _ _ 29 PML PML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2805 # text = Document 003003324 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003324 003003324 NUM CD NumType=Card _ _ _ _ 3 ends. ends. NOUN NN Number=Sing _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2806 # text = p70(s6k) integrates phosphatidylinositol 3-kinase and rapamycin-regulated signals for E2F regulation in T lymphocytes. 1 p70 p70 NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 s6 s6 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 k k NUM CD NumType=Card _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 integrates integrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 phosphatidylinositol phosphatidylinositol INTJ UH _ _ _ _ _ 8 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kinase kinase NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 rapamycin- rapamycin- PUNCT , _ _ _ _ SpaceAfter=No 13 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 signals signal NOUN NNS Number=Plur _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 E2 E2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 F F PROPN NNP Number=Sing _ _ _ _ 18 regulation regulation NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2807 # text = In T lymphocytes, the hematopoietic cytokine interleukin-2 (IL-2) uses phosphatidylinositol 3-kinase (PI 3-kinase)-induced signaling pathways to regulate E2F transcriptional activity, a critical cell cycle checkpoint. 1 In in ADP IN _ _ _ _ _ 2 T t PROPN NNP Number=Sing _ _ _ _ 3 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 7 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 8 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 uses use VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 phosphatidylinositol phosphatidylinositol INTJ UH _ _ _ _ _ 18 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kinase kinase NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 PI Pi NUM CD NumType=Card _ _ _ _ 23 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 signaling signaling NOUN NN Number=Sing _ _ _ _ 30 pathways pathway NOUN NNS Number=Plur _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 33 E2F E2F ADP RP _ _ _ _ _ 34 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 35 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 critical critical ADJ JJ Degree=Pos _ _ _ _ 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 cycle cycle NOUN NN Number=Sing _ _ _ _ 41 checkpoint checkpoint NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 2808 # text = PI 3-kinase also regulates the activity of p70(s6k), the 40S ribosomal protein S6 kinase, a response that is abrogated by the macrolide rapamycin. 1 PI PI NOUN NN Number=Sing _ _ _ _ 2 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT : _ _ _ _ SpaceAfter=No 4 kinase kinase NOUN NN Number=Sing _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 p70 p70 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 s6 s6 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 k k NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 S 's NOUN NN Number=Sing _ _ _ _ 19 ribosomal ribosomal ADJ JJ Degree=Pos _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 S6 S6 NUM CD NumType=Card _ _ _ _ 22 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 response response NOUN NN Number=Sing _ _ _ _ 26 that that PRON WDT PronType=Rel _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 abrogated abrogate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 macrolide macrolide ADJ JJ Degree=Pos _ _ _ _ 32 rapamycin rapamycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 2809 # text = This immunosuppressive drug is known to prevent T-cell proliferation, but the precise point at which rapamycin regulates T-cell cycle progression has yet to be elucidated. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 3 drug drug NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 prevent prevent VERB VB VerbForm=Inf _ _ _ _ 8 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 precise precise ADJ JJ Degree=Pos _ _ _ _ 15 point point NOUN NN Number=Sing _ _ _ _ 16 at at ADP IN _ _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 rapamycin rapamycin NOUN NN Number=Sing _ _ _ _ 19 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 T- T- PUNCT : _ _ _ _ SpaceAfter=No 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 cycle cycle NOUN NN Number=Sing _ _ _ _ 23 progression progression NOUN NN Number=Sing _ _ _ _ 24 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 yet yet ADV RB _ _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 be be AUX VB VerbForm=Inf _ _ _ _ 28 elucidated elucidate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2810 # text = Moreover, the effects of rapamycin on, and the role of p70(s6k) in, IL-2 and PI 3-kinase activation of E2Fs have not been characterized. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effects effect NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 rapamycin rapamycin NOUN NN Number=Sing _ _ _ _ 7 on on ADV RB _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 p70 p70 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 s6 s6 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 k k NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 in in ADP IN _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 PI PI NUM CD NumType=Card _ _ _ _ 25 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - PUNCT : _ _ _ _ SpaceAfter=No 27 kinase kinase NOUN NN Number=Sing _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 E2 E2 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 Fs F NOUN NNS Number=Plur _ _ _ _ 32 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 not not PART RB _ _ _ _ _ 34 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 35 characterized characterize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 2811 # text = Our present results show that IL-2- and PI 3-kinase-induced pathways for the regulation of E2F transcriptional activity include both rapamycin-resistant and rapamycin-sensitive components. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 results result NOUN NNS Number=Plur _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 PI PI PROPN NNP Number=Sing _ _ _ _ 12 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 pathways pathway NOUN NNS Number=Plur _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 regulation regulation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 E2F E2F PROPN NNP Number=Sing _ _ _ _ 23 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ _ 25 include include VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 both both CCONJ CC _ _ _ _ _ 27 rapamycin- rapamycin- SYM NFP _ _ _ _ SpaceAfter=No 28 resistant resistant NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 rapamycin- rapamycin- SYM NFP _ _ _ _ SpaceAfter=No 31 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 32 components component NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 2812 # text = Expression of a rapamycin-resistant mutant of p70(s6k) in T cells could restore rapamycin-suppressed E2F responses. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 rapamycin- rapamycin- SYM SYM _ _ _ _ SpaceAfter=No 5 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 6 mutant mutant NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 p70 p70 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 s6 s6 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 k k NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 could could AUX MD VerbForm=Fin _ _ _ _ 17 restore restore VERB VB VerbForm=Inf _ _ _ _ 18 rapamycin- rapamycin- PUNCT : _ _ _ _ SpaceAfter=No 19 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 E2 E2 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 F f PROPN NNP Number=Sing _ _ _ _ 22 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2813 # text = Thus, the rapamycin-controlled processes involved in E2F regulation appear to be mediated by p70(s6k). 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 rapamycin- rapamycin- SYM NFP _ _ _ _ SpaceAfter=No 5 controlled control VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 processes process NOUN NNS Number=Plur _ _ _ _ 7 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 E2 E2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 F F PROPN NNP Number=Sing _ _ _ _ 11 regulation regulation NOUN NN Number=Sing _ _ _ _ 12 appear appear VERB VB VerbForm=Inf _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 p70 p70 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 s6 s6 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 k k NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2814 # text = However, the rapamycin-resistant p70(s6k) could not rescue rapamycin inhibition of T-cell cycle entry, consistent with the involvement of additional, rapamycin-sensitive pathways in the control of T-cell cycle progression. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 rapamycin- rapamycin- SYM NFP _ _ _ _ SpaceAfter=No 5 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 6 p70 p70 NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 s6 s6 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 k k NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 could could AUX MD VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 rescue rescue VERB VB VerbForm=Inf _ _ _ _ 14 rapamycin rapamycin ADP IN _ _ _ _ _ 15 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 cycle cycle NOUN NN Number=Sing _ _ _ _ 20 entry entry NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 involvement involvement NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 additional additional ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 rapamycin- rapamycin- SYM NFP _ _ _ _ SpaceAfter=No 30 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 31 pathways pathway NOUN NNS Number=Plur _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 control control NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 cycle cycle NOUN NN Number=Sing _ _ _ _ 39 progression progression NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 2815 # text = The present results thus show that p70(s6k) is able to regulate E2F transcriptional activity and provide direct evidence for the first time for a link between IL-2 receptors, PI 3-kinase, and p70(s6k) that regulates a crucial G1 checkpoint in T lymphocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 results result NOUN NNS Number=Plur _ _ _ _ 4 thus thus ADV RB _ _ _ _ _ 5 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 p70 p70 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 s6 s6 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 k k NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 able able ADJ JJ Degree=Pos _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 16 E2F E2F ADP RP _ _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 provide provide VERB VB VerbForm=Inf _ _ _ _ 21 direct direct ADJ JJ Degree=Pos _ _ _ _ 22 evidence evidence NOUN NN Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 26 time time NOUN NN Number=Sing _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 link link NOUN NN Number=Sing _ _ _ _ 30 between between ADP IN _ _ _ _ _ 31 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 2 2 NUM CD NumType=Card _ _ _ _ 34 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 PI pi NOUN NN Number=Sing _ _ _ _ 37 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 - - PUNCT : _ _ _ _ SpaceAfter=No 39 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 p70 p70 NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 s6 s6 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 k k NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 ) ) PUNCT -RRB- _ _ _ _ _ 47 that that PRON WDT PronType=Rel _ _ _ _ 48 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 49 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 50 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 51 G1 g1 NOUN NN Number=Sing _ _ _ _ 52 checkpoint checkpoint NOUN NN Number=Sing _ _ _ _ 53 in in ADP IN _ _ _ _ _ 54 T t PROPN NNP Number=Sing _ _ _ _ 55 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2816 # text = Document 003003327 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003327 003003327 NUM CD NumType=Card _ _ _ _ 3 ends. ends. NOUN NN Number=Sing _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2817 # text = USF/c-Myc enhances, while Yin-Yang 1 suppresses, the promoter activity of CXCR4, a coreceptor for HIV-1 entry. 1 USF/ USF/ SYM NFP _ _ _ _ SpaceAfter=No 2 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 Myc Myc NOUN NN Number=Sing _ _ _ _ 5 enhances enhance NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 while while SCONJ IN _ _ _ _ _ 8 Yin Yin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 Yang Yang PROPN NNP Number=Sing _ _ _ _ 11 1 1 NUM CD NumType=Card _ _ _ _ 12 suppresses suppress NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 promoter promoter ADJ JJ Degree=Pos _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 CXCR4 CXCR4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 coreceptor coreceptor NOUN NN Number=Sing _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 entry entry NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2818 # text = Transcription factors USF1 and USF2 up-regulate gene expression (i.e., HIV-1 long terminal repeats) via interaction with an E box on their target promoters, which is also a binding site for c-Myc. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 USF1 USF1 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 USF2 USF2 NUM CD NumType=Card _ _ _ _ 6 up up ADV RB _ _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 i.e. i.e. X FW _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 long long ADJ JJ Degree=Pos _ _ _ _ 18 terminal terminal NOUN NN Number=Sing _ _ _ _ 19 repeats repeat VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 via via ADP IN _ _ _ _ _ 22 interaction interaction NOUN NN Number=Sing _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 E e NOUN NN Number=Sing _ _ _ _ 26 box box NOUN NN Number=Sing _ _ _ _ 27 on on ADP IN _ _ _ _ _ 28 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 29 target target NOUN NN Number=Sing _ _ _ _ 30 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 which which PRON WDT PronType=Rel _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 also also ADV RB _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 binding bind VERB VBG VerbForm=Ger _ _ _ _ 37 site site NOUN NN Number=Sing _ _ _ _ 38 for for ADP IN _ _ _ _ _ 39 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 Myc Myc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 2819 # text = The c-Myc oncoprotein is important in control of cellular proliferation and differentiation, while Yin-Yang 1 (YY1) has been shown to control the expression of a number of cellular and viral genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 Myc Myc NOUN NN Number=Sing _ _ _ _ 5 oncoprotein oncoprotein NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 important important ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 control control NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 12 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 while while SCONJ IN _ _ _ _ _ 17 Yin Yin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 Yang Yang PROPN NNP Number=Sing _ _ _ _ 20 1 1 NUM CD NumType=Card _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 YY1 yy1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 26 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 control control VERB VB VerbForm=Inf _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 number number NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 viral viral ADJ JJ Degree=Pos _ _ _ _ 38 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 2820 # text = These two proteins physically interact with each other and mutually inhibit their respective biological functions. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 proteins protein NOUN NNS Number=Plur _ _ _ _ 4 physically physically ADV RB _ _ _ _ _ 5 interact interact ADJ JJ Degree=Pos _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 each each DET DT _ _ _ _ _ 8 other other ADJ JJ Degree=Pos _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 mutually mutually ADV RB _ _ _ _ _ 11 inhibit inhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 respective respective ADJ JJ Degree=Pos _ _ _ _ 14 biological biological ADJ JJ Degree=Pos _ _ _ _ 15 functions function NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2821 # text = In this study, we show that USF/c-Myc up-regulates, while YY1 down-regulates the promoter activity of CXCR4, a coreceptor for T cell-tropic HIV-1 entry. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 USF/ USF/ PUNCT HYPH _ _ _ _ SpaceAfter=No 9 c class NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 Myc Myc NOUN NN Number=Sing _ _ _ _ 12 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 regulates regulate NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 while while SCONJ IN _ _ _ _ _ 17 YY1 YY1 PRON NN Abbr=Yes|Number=Sing _ _ _ _ 18 down down ADV RB _ _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 CXCR4 CXCR4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 coreceptor coreceptor NOUN NN Number=Sing _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 T t PROPN NNP Number=Sing _ _ _ _ 31 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 tropic tropic ADJ JJ Degree=Pos _ _ _ _ 34 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ _ 37 entry entry NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 2822 # text = We have identified an E box around -260 and a YY1 binding site around -300 relative to the transcription start site. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 E e NOUN NN Number=Sing _ _ _ _ 6 box box NOUN NN Number=Sing _ _ _ _ 7 around around ADV RB _ _ _ _ _ 8 - - SYM SYM _ _ _ _ SpaceAfter=No 9 260 260 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 YY1 yy1 NOUN NN Number=Sing _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ _ 15 around around ADV RB _ _ _ _ _ 16 - - SYM SYM _ _ _ _ SpaceAfter=No 17 300 300 NUM CD NumType=Card _ _ _ _ 18 relative relative ADV RB _ _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 start start NOUN NN Number=Sing _ _ _ _ 23 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2823 # text = Mutation of the E box abolished USF/c-Myc- mediated up-regulation of CXCR4 promoter activity, and mutation of the YY1 binding site was associated with unresponsiveness to YY1-mediated inhibition. 1 Mutation Mutation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 E e NOUN NN Number=Sing _ _ _ _ 5 box box NOUN NN Number=Sing _ _ _ _ 6 abolished abolish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 USF/ USF/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 8 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 Myc Myc NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ _ 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 regulation regulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 CXCR4 CXCR4 NUM CD NumType=Card _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 mutation mutation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 YY1 YY1 NOUN NN Number=Sing _ _ _ _ 26 binding binding VERB VBG VerbForm=Ger _ _ _ _ 27 site site NOUN NN Number=Sing _ _ _ _ 28 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 29 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 unresponsiveness unresponsiveness NOUN NN Number=Sing _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 YY1 YY1 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 inhibition inhibition NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 2824 # text = These data suggest that USF/c-Myc and YY1 may play an important role in the HIV-1-replicative cycle, by modulating both the viral fusion/entry process and viral expression. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 USF/ Usf/ PUNCT HYPH _ _ _ _ SpaceAfter=No 6 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 Myc Myc NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 YY1 yy1 PRON NN Abbr=Yes|Number=Sing _ _ _ _ 11 may may AUX MD VerbForm=Fin _ _ _ _ 12 play play VERB VB VerbForm=Inf _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 important important ADJ JJ Degree=Pos _ _ _ _ 15 role role NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 replicative replicative ADJ JJ Degree=Pos _ _ _ _ 23 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 by by SCONJ IN _ _ _ _ _ 26 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 27 both both CCONJ CC _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 viral viral ADJ JJ Degree=Pos _ _ _ _ 30 fusion fusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 / / PUNCT , _ _ _ _ SpaceAfter=No 32 entry entry NOUN NN Number=Sing _ _ _ _ 33 process process NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 viral viral ADJ JJ Degree=Pos _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2825 # text = Document 003003329 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003329 003003329 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2826 # text = The transcriptionally active factors mediating the effect of the HTLV-I Tax transactivator on the IL-2R alpha kappa 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcriptionally transcriptionally ADV RB _ _ _ _ _ 3 active active ADJ JJ Degree=Pos _ _ _ _ 4 factors factor NOUN NNS Number=Plur _ _ _ _ 5 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 effect effect NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 13 Tax tax PROPN NNP Number=Sing _ _ _ _ 14 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2R 2r PROPN NNP Number=Sing _ _ _ _ 20 alpha alpha NOUN NN Number=Sing _ _ _ _ 21 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 2827 # text = B enhancer include the product of the c-rel proto-oncogene. 1 B benefit ADJ JJ Degree=Pos _ _ _ _ 2 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 3 include include VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 product product NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 c- c- SYM NFP _ _ _ _ SpaceAfter=No 9 rel rel NOUN NN Number=Sing _ _ _ _ 10 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 -oncogene -oncogene NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2828 # text = The transactivator HTLV-I Tax activates the promoter of the gene coding for the interleukin 2 alpha-chain receptor (IL-2R alpha) via a kappa B site that can bind several protein species of the rel family. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 3 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 Tax tax PROPN NNP Number=Sing _ _ _ _ 7 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 coding code VERB VBG VerbForm=Ger _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 17 2 2 NUM CD NumType=Card _ _ _ _ 18 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 chain chain NOUN NN Number=Sing _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2R 2r NOUN NN Number=Sing _ _ _ _ 26 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 via via ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 kappa kappa NOUN NN Number=Sing _ _ _ _ 31 B b NOUN NN Number=Sing _ _ _ _ 32 site site NOUN NN Number=Sing _ _ _ _ 33 that that PRON WDT PronType=Rel _ _ _ _ 34 can can AUX MD VerbForm=Fin _ _ _ _ 35 bind bind VERB VB VerbForm=Inf _ _ _ _ 36 several several ADJ JJ Degree=Pos _ _ _ _ 37 protein protein NOUN NN Number=Sing _ _ _ _ 38 species species NOUN NNS Number=Plur _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 rel rel ADJ JJ Degree=Pos _ _ _ _ 42 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 2829 # text = Tax1 strongly activates the enhancer activity of this motif, in both epithelial HeLa and lymphoid Jurkat cells. 1 Tax1 tax1 PROPN NNP Number=Sing _ _ _ _ 2 strongly strongly ADV RB _ _ _ _ _ 3 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 9 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 both both DET DT _ _ _ _ _ 13 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 14 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 17 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2830 # text = This activation was not observed in undifferentiated embryocarcinoma F9 cells. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 undifferentiated undifferentiated ADJ JJ Degree=Pos _ _ _ _ 8 embryocarcinoma embryocarcinoma NOUN NN Number=Sing _ _ _ _ 9 F9 F9 NUM CD NumType=Card _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 2831 # text = Overexpression of the p50, p65 and Rel proteins in these cells showed that significant activation of the IL-2R alpha kappa B site was observed only with Rel and Rel plus p65. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 p65 p65 NUM CD NumType=Card _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 Rel Rel NOUN NN Number=Sing _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 significant significant ADJ JJ Degree=Pos _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2R 2r PROPN NNP Number=Sing _ _ _ _ 22 alpha alpha ADP IN _ _ _ _ _ 23 kappa kappa PROPN NNP Number=Sing _ _ _ _ 24 B b PROPN NNP Number=Sing _ _ _ _ 25 site site NOUN NN Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 only only ADV RB _ _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 Rel Rel PROPN NNP Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 Rel Rel PROPN NNP Number=Sing _ _ _ _ 33 plus plus ADV RB _ _ _ _ _ 34 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 2832 # text = Moreover, whereas both Tax and phorbol 12-myristate 13-acetate (PMA) are able to efficiently induce the binding of NF-kappa B to the IL-2R alpha kappa B site, PMA is functionally inactive. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 whereas whereas SCONJ IN _ _ _ _ _ 4 both both DET DT _ _ _ _ _ 5 Tax tax NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 8 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT : _ _ _ _ SpaceAfter=No 10 myristate myristate NOUN NN Number=Sing _ _ _ _ 11 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT : _ _ _ _ SpaceAfter=No 13 acetate acetate NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 PMA Pma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 able able ADJ JJ Degree=Pos _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 efficiently efficiently ADV RB _ _ _ _ _ 21 induce induce VERB VB VerbForm=Inf _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 binding binding NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 2R 2r NOUN NN Number=Sing _ _ _ _ 34 alpha alpha NOUN NN Number=Sing _ _ _ _ 35 kappa kappa NOUN NN Number=Sing _ _ _ _ 36 B b NOUN NN Number=Sing _ _ _ _ 37 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 PMA PMA PROPN NNP Number=Sing _ _ _ _ 40 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 41 functionally functionally ADV RB _ _ _ _ _ 42 inactive inactive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 2833 # text = Using the DNA affinity precipitation assay, we observed that Tax1 is able to efficiently induce the binding of Rel, whereas PMA is not. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 DNA dna NOUN NN Number=Sing _ _ _ _ 4 affinity affinity NOUN NN Number=Sing _ _ _ _ 5 precipitation precipitation NOUN NN Number=Sing _ _ _ _ 6 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 9 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 Tax1 Tax1 PROPN NNP Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 able able ADJ JJ Degree=Pos _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 efficiently efficiently ADV RB _ _ _ _ _ 16 induce induce VERB VB VerbForm=Inf _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 binding binding NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 whereas whereas SCONJ IN _ _ _ _ _ 23 PMA PMA PROPN NNP Number=Sing _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 not not PART RB _ _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 2834 # text = This established a clear difference between both stimuli, indicating that Rel is the functionally active factor. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 established establish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 clear clear ADJ JJ Degree=Pos _ _ _ _ 5 difference difference NOUN NN Number=Sing _ _ _ _ 6 between between ADP IN _ _ _ _ _ 7 both both DET DT _ _ _ _ _ 8 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 Rel Rel PROPN NNP Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 functionally functionally ADV RB _ _ _ _ _ 16 active active ADJ JJ Degree=Pos _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2835 # text = We conclude from these results that the functional activity of members of the rel family is regulated by their interaction with DNA and that Rel can be a potent transcriptional activator on specific kappa B sites. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 functional functional ADJ JJ Degree=Pos _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 members member NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 rel rel ADJ JJ Degree=Pos _ _ _ _ 15 family family NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 interaction interaction NOUN NN Number=Sing _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 DNA dna NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 Rel Rel PROPN NNP Number=Sing _ _ _ _ 26 can can AUX MD VerbForm=Fin _ _ _ _ 27 be be AUX VB VerbForm=Inf _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 potent potent ADJ JJ Degree=Pos _ _ _ _ 30 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 31 activator activator NOUN NN Number=Sing _ _ _ _ 32 on on ADP IN _ _ _ _ _ 33 specific specific ADJ JJ Degree=Pos _ _ _ _ 34 kappa kappa NOUN NN Number=Sing _ _ _ _ 35 B b NOUN NN Number=Sing _ _ _ _ 36 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2836 # text = Document 003003330 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003330 003003330 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2837 # text = Phenotypic and functional studies of leukocytes in human endometrium and endometriosis. 1 Phenotypic Phenotypic ADJ JJ Degree=Pos _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 functional functional ADJ JJ Degree=Pos _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 endometrium endometrium NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 endometriosis endometriosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2838 # text = The aetiology of endometriosis, a common and disabling disorder, is presently unknown, although immune dysfunction could allow ectopic endometrial fragments to survive outside the uterine cavity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 aetiology aetiology NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 endometriosis endometriosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 common common ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 disabling disabl ADJ JJ Degree=Pos _ _ _ _ 10 disorder disorder NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 presently presently ADV RB _ _ _ _ _ 14 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 although although SCONJ IN _ _ _ _ _ 17 immune immune ADJ JJ Degree=Pos _ _ _ _ 18 dysfunction dysfunction NOUN NN Number=Sing _ _ _ _ 19 could could AUX MD VerbForm=Fin _ _ _ _ 20 allow allow VERB VB VerbForm=Inf _ _ _ _ 21 ectopic ectopic ADJ JJ Degree=Pos _ _ _ _ 22 endometrial endometrial ADJ JJ Degree=Pos _ _ _ _ 23 fragments fragment NOUN NNS Number=Plur _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 survive survive VERB VB VerbForm=Inf _ _ _ _ 26 outside outside ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 uterine uterine NOUN NN Number=Sing _ _ _ _ 29 cavity cavity NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2839 # text = These studies investigate the relationship between leukocyte populations, steroid hormone receptor expression, proliferative activity, bcl-2 expression and apoptosis in eutopic and ectopic endometrium from women with endometriosis or adenomyosis at different phases of the menstrual cycle. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 investigate investigate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 relationship relationship NOUN NN Number=Sing _ _ _ _ 6 between between ADP IN _ _ _ _ _ 7 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 8 populations population NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 steroid steroid ADJ JJ Degree=Pos _ _ _ _ 11 hormone hormone NOUN NN Number=Sing _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 eutopic eutopic ADJ JJ Degree=Pos _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 ectopic ectopic ADJ JJ Degree=Pos _ _ _ _ 28 endometrium endometrium NOUN NN Number=Sing _ _ _ _ 29 from from ADP IN _ _ _ _ _ 30 women woman NOUN NNS Number=Plur _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 endometriosis endometriosis NOUN NN Number=Sing _ _ _ _ 33 or or CCONJ CC _ _ _ _ _ 34 adenomyosis adenomyosis NOUN NN Number=Sing _ _ _ _ 35 at at ADP IN _ _ _ _ _ 36 different different ADJ JJ Degree=Pos _ _ _ _ 37 phases phasis NOUN NNS Number=Plur _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 menstrual menstrual ADJ JJ Degree=Pos _ _ _ _ 41 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 2840 # text = Significantly increased oestrogen receptor expression, bcl-2 expression and numbers of CD8+ leukocytes were found in ectopic compared with eutopic endometrium in endometriosis, and CD56+ endometrial granulated lymphocytes (eGLs) were significantly reduced in ectopic endometrium. 1 Significantly significantly ADV RB _ _ _ _ _ 2 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 oestrogen oestrogen ADJ JJ Degree=Pos _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 numbers number NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 CD8 CD8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 + + SYM SYM _ _ _ _ _ 16 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 17 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 ectopic ectopic ADJ JJ Degree=Pos _ _ _ _ 21 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 eutopic eutopic ADJ JJ Degree=Pos _ _ _ _ 24 endometrium endometrium NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 endometriosis endometriosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 CD56 CD56 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 + + SYM SYM _ _ _ _ _ 31 endometrial endometrial ADJ JJ Degree=Pos _ _ _ _ 32 granulated granulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 eGLs eGL NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 38 significantly significantly ADV RB _ _ _ _ _ 39 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 ectopic ectopic ADJ JJ Degree=Pos _ _ _ _ 42 endometrium endometrium NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 2841 # text = Apoptotic cells were rarely found in control and subject endometria. 1 Apoptotic Apoptotic ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 rarely rarely ADV RB _ _ _ _ _ 5 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 control control NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 subject subject ADJ JJ Degree=Pos _ _ _ _ 10 endometria endometria NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 2842 # text = In contrast with endometriosis, adenomyotic lesions showed identical steroid hormone receptor expression, proliferative activity, bcl-2 expression and leukocyte subpopulations to eutopic endometrium, indicating different aetiologies for these disorders. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 endometriosis endometriosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 adenomyotic adenomyotic ADJ JJ Degree=Pos _ _ _ _ 7 lesions lesion NOUN NNS Number=Plur _ _ _ _ 8 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 identical identical ADJ JJ Degree=Pos _ _ _ _ 10 steroid steroid NOUN NN Number=Sing _ _ _ _ 11 hormone hormone NOUN NN Number=Sing _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 24 subpopulations subpopulation NOUN NNS Number=Plur _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 eutopic eutopic ADJ JJ Degree=Pos _ _ _ _ 27 endometrium endometrium NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 30 different different ADJ JJ Degree=Pos _ _ _ _ 31 aetiologies aetiology NOUN NNS Number=Plur _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 34 disorders disorder NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 2843 # text = The unusual CD56+ CD16- eGLs present in large numbers in late secretory phase eutopic endometrium were highly purified (>98%) by immunomagnetic separation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 unusual unusual ADJ JJ Degree=Pos _ _ _ _ 3 CD56 CD56 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 + + SYM SYM _ _ _ _ _ 5 CD16 CD16 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT : _ _ _ _ _ 7 eGLs eGLs NOUN NNS Number=Plur _ _ _ _ 8 present present ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 large large ADJ JJ Degree=Pos _ _ _ _ 11 numbers number NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 late late ADJ JJ Degree=Pos _ _ _ _ 14 secretory secretory ADJ JJ Degree=Pos _ _ _ _ 15 phase phase NOUN NN Number=Sing _ _ _ _ 16 eutopic eutopic ADJ JJ Degree=Pos _ _ _ _ 17 endometrium endometrium NOUN NN Number=Sing _ _ _ _ 18 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 highly highly ADV RB _ _ _ _ _ 20 purified purify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 >98 >98 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 immunomagnetic immunomagnetic ADJ JJ Degree=Pos _ _ _ _ 27 separation separation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2844 # text = Except for a negligible cytotoxic activity of eGLs from early proliferative samples, cytotoxic activity of eGLs from non-pregnant endometrium during the menstrual cycle was comparable with those in peripheral blood, predominantly CD56+ CD16+ natural killer cells. 1 Except except VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 for for ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 negligible negligible ADJ JJ Degree=Pos _ _ _ _ 5 cytotoxic cytotoxic ADJ JJ Degree=Pos _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 eGLs eGL NOUN NNS Number=Plur _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 early early ADJ JJ Degree=Pos _ _ _ _ 11 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 12 samples sample NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 cytotoxic cytotoxic ADJ JJ Degree=Pos _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 eGLs eGL NOUN NNS Number=Plur _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 non-pregnant non-pregnant ADJ JJ Degree=Pos _ _ _ _ 20 endometrium endometrium NOUN NN Number=Sing _ _ _ _ 21 during during ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 menstrual menstrual ADJ JJ Degree=Pos _ _ _ _ 24 cycle cycle NOUN NN Number=Sing _ _ _ _ 25 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 26 comparable comparable ADJ JJ Degree=Pos _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 31 blood blood NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 predominantly predominantly ADV RB _ _ _ _ _ 34 CD56 CD56 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 + + SYM SYM _ _ _ _ _ 36 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 16 16 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 + + SYM SYM _ _ _ _ _ 39 natural natural ADJ JJ Degree=Pos _ _ _ _ 40 killer killer NOUN NN Number=Sing _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 2845 # text = eGLs from non-pregnant endometrium and early pregnancy showed a variable proliferative response to 5 and 100 U/ml interleukin-2 over 48-h and 120-h time courses. 1 eGLs eGL NOUN NNS Number=Plur _ _ _ _ 2 from from ADP IN _ _ _ _ _ 3 non-pregnant non-pregnant ADJ JJ Degree=Pos _ _ _ _ 4 endometrium endometrium NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 early early ADJ JJ Degree=Pos _ _ _ _ 7 pregnancy pregnancy NOUN NN Number=Sing _ _ _ _ 8 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 variable variable ADJ JJ Degree=Pos _ _ _ _ 11 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 12 response response NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 5 5 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 100 100 NUM CD NumType=Card _ _ _ _ 17 U/ Uith NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ml ml NOUN NN Number=Sing _ _ _ _ 19 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ _ 22 over over ADP IN _ _ _ _ _ 23 48 48 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 h h NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 120 120 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 h h NOUN NN Number=Sing _ _ _ _ 30 time time NOUN NN Number=Sing _ _ _ _ 31 courses course NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2846 # text = eGLs are evidently functionally important in the eutopic endometrium. 1 eGLs eGL NOUN NNS Number=Plur _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 evidently evidently ADV RB _ _ _ _ _ 4 functionally functionally ADV RB _ _ _ _ _ 5 important important ADJ JJ Degree=Pos _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 eutopic eutopic ADJ JJ Degree=Pos _ _ _ _ 9 endometrium endometrium NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 2847 # text = Their absence in endometriotic lesions together with increased CD+8 T-cell numbers and increased oestrogen receptor and bcl-2 expression may have significant effects on the development and progression of endometriosis. 1 Their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 2 absence absence NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 endometriotic endometriotic ADJ JJ Degree=Pos _ _ _ _ 5 lesions lesion NOUN NNS Number=Plur _ _ _ _ 6 together together ADV RB _ _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 + + SYM SYM _ _ _ _ SpaceAfter=No 11 8 8 NUM CD NumType=Card _ _ _ _ 12 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 numbers number NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 oestrogen oestrogen ADJ JJ Degree=Pos _ _ _ _ 18 receptor receptor NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 may may AUX MD VerbForm=Fin _ _ _ _ 25 have have VERB VB VerbForm=Inf _ _ _ _ 26 significant significant ADJ JJ Degree=Pos _ _ _ _ 27 effects effect NOUN NNS Number=Plur _ _ _ _ 28 on on ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 development development NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 progression progression NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 endometriosis endometriosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2848 # text = Document 003003333 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003333 003003333 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2849 # text = Constitutive activation of an epithelial signal transducer and activator of transcription (STAT) pathway in asthma. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 6 signal signal NOUN NN Number=Sing _ _ _ _ 7 transducer transducer NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 activator activator NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 STAT STAT NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 pathway pathway NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 asthma asthma NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2850 # text = Cytokine effects on immunity and inflammation often depend on the transcription factors termed signal transducers and activators of transcription (STATs), so STAT signaling pathways are candidates for influencing inflammatory disease. 1 Cytokine Cytokine VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 on on ADP IN _ _ _ _ _ 4 immunity immunity NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 7 often often ADV RB _ _ _ _ _ 8 depend depend VERB VB Typo=Yes|VerbForm=Inf _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 signal signal ADJ JJ Degree=Pos _ _ _ _ 15 transducers transducer NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 activators activator NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 STATs STATs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 so so ADV RB _ _ _ _ _ 25 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 26 signaling signaling NOUN NN Number=Sing _ _ _ _ 27 pathways pathway NOUN NNS Number=Plur _ _ _ _ 28 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 candidates candidate NOUN NNS Number=Plur _ _ _ _ 30 for for SCONJ IN _ _ _ _ _ 31 influencing influence VERB VBG VerbForm=Ger _ _ _ _ 32 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 33 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 2851 # text = We reasoned that selective IFN responsiveness of the first STAT family member (Stat1) and Stat1-dependent immune-response genes such as intercellular adhesion molecule-1 (ICAM-1), IFN regulatory factor-1 (IRF-1), and Stat1 itself in airway epithelial cells provides a basis for detecting cytokine signaling abnormalities in inflammatory airway disease. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 reasoned reason VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 selective selective ADJ JJ Degree=Pos _ _ _ _ 5 IFN Ifn NOUN NN Number=Sing _ _ _ _ 6 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 10 STAT Stat NOUN NN Number=Sing _ _ _ _ 11 family family NOUN NN Number=Sing _ _ _ _ 12 member member NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 Stat1 Stat1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 Stat1 Stat1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 20 immune immune ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 response response NOUN NN Number=Sing _ _ _ _ 23 genes gene NOUN NNS Number=Plur _ _ _ _ 24 such such ADJ JJ Degree=Pos _ _ _ _ 25 as as ADP IN _ _ _ _ _ 26 intercellular intercellular ADJ JJ Degree=Pos _ _ _ _ 27 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 28 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 IFN Ifn PROPN NNP Number=Sing _ _ _ _ 38 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 39 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 -1 -1 NUM CD NumType=Card _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 IRF Irf NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 Stat1 Stat1 PROPN NNP Number=Sing _ _ _ _ 49 itself itself PRON PRP Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 50 in in ADP IN _ _ _ _ _ 51 airway airway ADJ JJ Degree=Pos _ _ _ _ 52 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 53 cells cell NOUN NNS Number=Plur _ _ _ _ 54 provides provides VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 55 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 56 basis basis NOUN NN Number=Sing _ _ _ _ 57 for for SCONJ IN _ _ _ _ _ 58 detecting detect VERB VBG VerbForm=Ger _ _ _ _ 59 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 60 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 61 abnormalities abnormality NOUN NNS Number=Plur _ _ _ _ 62 in in ADP IN _ _ _ _ _ 63 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 64 airway airway NOUN NN Number=Sing _ _ _ _ 65 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 66 . . PUNCT . _ _ _ _ _ # sent_id = 2852 # text = On the basis of nuclear localization and phosphorylation, we found that epithelial Stat1 (but not other control transcription factors) was invariably activated in asthmatic compared with normal control or chronic bronchitis subjects. 1 On on ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 basis basis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 localization localization NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 13 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 14 Stat1 Stat1 NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 but but CCONJ CC _ _ _ _ _ 17 not not ADV RB _ _ _ _ _ 18 other other ADJ JJ Degree=Pos _ _ _ _ 19 control control NOUN NN Number=Sing _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 invariably invariably ADV RB _ _ _ _ _ 25 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 asthmatic asthmatic ADJ JJ Degree=Pos _ _ _ _ 28 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 normal normal ADJ JJ Degree=Pos _ _ _ _ 31 control control NOUN NN Number=Sing _ _ _ _ 32 or or CCONJ CC _ _ _ _ _ 33 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 34 bronchitis bronchitis NOUN NN Number=Sing _ _ _ _ 35 subjects subject NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 2853 # text = Furthermore, epithelial levels of activated Stat1 correlated with levels of expression for epithelial ICAM-1, IRF-1, and Stat1, and in turn, ICAM-1 levels correlated with T-cell accumulation in tissue. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 4 levels level NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 Stat1 stat1 PROPN NNP Number=Sing _ _ _ _ 8 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 levels level NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 15 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 Stat1 Stat1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 turn turn NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ _ 33 levels level NOUN NNS Number=Plur _ _ _ _ 34 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 2854 # text = However, only low levels of IFN-gamma or IFN-gamma-producing cells were detected in airway tissue in all subjects. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 only only ADV RB _ _ _ _ _ 4 low low ADJ JJ Degree=Pos _ _ _ _ 5 levels level NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 IFN IFN NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 gamma gamma NOUN NN Number=Sing _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 IFN- IFN- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 producing producing VERB VBG VerbForm=Ger _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 airway airway NOUN NN Number=Sing _ _ _ _ 20 tissue tissue NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 all all DET DT _ _ _ _ _ 23 subjects subjects NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2855 # text = The results therefore provide initial evidence linking abnormal behavior of STAT pathways for cytokine signaling to the development of an inflammatory disease. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 therefore therefore ADV RB _ _ _ _ _ 4 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 initial initial ADJ JJ Degree=Pos _ _ _ _ 6 evidence evidence NOUN NN Number=Sing _ _ _ _ 7 linking link VERB VBG VerbForm=Ger _ _ _ _ 8 abnormal abnormal ADJ JJ Degree=Pos _ _ _ _ 9 behavior behavior NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 12 pathways pathway NOUN NNS Number=Plur _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 15 signaling signal NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 development development NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 22 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2856 # text = In that context, the results also change the current scheme for asthma pathogenesis to one that must include a localized gain in transcriptional signal ordinarily used for a T helper 1-type cytokine (IFN-gamma) in combination with allergy-driven overproduction of T helper 2-type cytokines. 1 In in ADP IN _ _ _ _ _ 2 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 3 context context NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 results result NOUN NNS Number=Plur _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 change change VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 current current ADJ JJ Degree=Pos _ _ _ _ 11 scheme scheme NOUN NN Number=Sing _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 asthma asthma NOUN NN Number=Sing _ _ _ _ 14 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 one one NUM CD NumType=Card _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 must must AUX MD VerbForm=Fin _ _ _ _ 19 include include VERB VB VerbForm=Inf _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 localized localize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 gain gain NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 25 signal signal NOUN NN Number=Sing _ _ _ _ 26 ordinarily ordinarily ADV RB _ _ _ _ _ 27 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 T T PROPN NNP Number=Sing _ _ _ _ 31 helper helper NOUN NN Number=Sing _ _ _ _ 32 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 type type NOUN NN Number=Sing _ _ _ _ 35 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 combination combination NOUN NN Number=Sing _ _ _ _ 43 with with ADP IN _ _ _ _ _ 44 allergy allergy NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 driven driven VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 overproduction overproduction NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 T T PROPN NNP Number=Sing _ _ _ _ 50 helper helper NOUN NN Number=Sing _ _ _ _ 51 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 type type NOUN NN Number=Sing _ _ _ _ 54 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2857 # text = Document 003003335 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003335 003003335 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2858 # text = Protein kinase B (c-Akt), phosphatidylinositol 3-kinase, and STAT5 are activated by erythropoietin (EPO) in HCD57 erythroid cells but are constitutively active in an EPO-independent, apoptosis-resistant subclone (HCD57-SREI cells). 1 Protein protein NOUN NN Number=Sing _ _ _ _ 2 kinase kinase NOUN NN Number=Sing _ _ _ _ 3 B b NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 Akt Akt NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 phosphatidylinositol phosphatidylinositol INTJ UH _ _ _ _ _ 11 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT : _ _ _ _ SpaceAfter=No 13 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 STAT5 stat5 PROPN NNP Number=Sing _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 erythropoietin erythropoietin NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 EPO EPO INTJ UH _ _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 HCD57 HCD57 NUM CD NumType=Card _ _ _ _ 26 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 but but CCONJ CC _ _ _ _ _ 29 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 constitutively constitutively ADV RB _ _ _ _ _ 31 active active ADJ JJ Degree=Pos _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 EPO EPO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 independent independent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 apoptosis apoptosis ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 resistant resistant NOUN NN Number=Sing _ _ _ _ 41 subclone subclone NOUN NN Number=Sing _ _ _ _ 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 HCD57- HCD57- SYM SYM _ _ _ _ SpaceAfter=No 44 SREI Srei NUM CD NumType=Card _ _ _ _ 45 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2859 # text = We found that erythropoietin (EPO) and stem cell factor (SCF) activated protein kinase B (PKB/Akt) in EPO-dependent HCD57 erythroid cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 erythropoietin erythropoietin NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 EPO EPO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 stem stem NOUN NN Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 SCF SCF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 kinase kinase NOUN NN Number=Sing _ _ _ _ 18 B b PROPN NNP Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 PKB PKB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 Akt Akt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 EPO EPO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 28 HCD57 HCD57 NUM CD NumType=Card _ _ _ _ 29 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2860 # text = To better understand signals controlling proliferation and viability, erythroid cells that resist apoptosis in the absence of EPO were subcloned and characterized (HCD57-SREI cells). 1 To to ADP IN _ _ _ _ _ 2 better better ADJ JJR Degree=Cmp _ _ _ _ 3 understand understand ADJ JJ Degree=Pos _ _ _ _ 4 signals signal NOUN NNS Number=Plur _ _ _ _ 5 controlling control VERB VBG VerbForm=Ger _ _ _ _ 6 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 viability viability NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 resist resist VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 absence absence NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 EPO EPO PROPN NNP Number=Sing _ _ _ _ 20 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 subcloned subclon VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 HCD57- HCD57- SYM NFP _ _ _ _ SpaceAfter=No 26 SREI SREI ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2861 # text = Constitutive activations of PKB/Akt, STAT5a, and STAT5b were noted in these EPO-independent cells. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 activations activation NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 PKB PKB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 Akt Akt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 STAT5a STAT5a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 STAT5 STAT5 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 b b NOUN NN Number=Sing _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 noted note VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 17 EPO Epo ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 -independent -independent ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2862 # text = PI3-kinase activity was an upstream activator of PKB/Akt because the PI3-kinase inhibitor LY294002 blocked both constitutive PKB/Akt and factor-dependent PKB/Akt activity. 1 PI3 PI3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kinase kinase NOUN NN Number=Sing _ _ _ _ 4 activity activity NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 8 activator activator NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 PKB PKB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 Akt Akt PROPN NNP Number=Sing _ _ _ _ 13 because because SCONJ IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 PI3 PI3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 -kinase -kinase NOUN NN Number=Sing _ _ _ _ 17 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 18 LY294002 LY294002 NUM CD NumType=Card _ _ _ _ 19 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 both both DET DT _ _ _ _ _ 21 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 22 PKB Pkb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 / / PUNCT , _ _ _ _ SpaceAfter=No 24 Akt Akt PROPN NNP Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 factor-dependent factor-dependent ADJ JJ Degree=Pos _ _ _ _ 27 PKB PKB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 / / PUNCT , _ _ _ _ SpaceAfter=No 29 Akt Akt PROPN NNP Number=Sing _ _ _ _ 30 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2863 # text = The LY294002 study showed that proliferation and viability of both HCD57-SREI and HCD57 cells correlated with the activity of PKB/Akt; however, PKB/Akt activity alone did not protect these cells from apoptosis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 LY294002 Ly294002 NUM CD NumType=Card _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 viability viability NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 both both CCONJ CC _ _ _ _ _ 11 HCD57-SREI HCD57-SREI NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 HCD57 HCD57 NUM CD NumType=Card _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 PKB PKB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 Akt Akt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ; ; PUNCT , _ _ _ _ _ 24 however however ADV RB _ _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 PKB PKB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 / / PUNCT , _ _ _ _ SpaceAfter=No 28 Akt Akt PROPN NNP Number=Sing _ _ _ _ 29 activity activity NOUN NN Number=Sing _ _ _ _ 30 alone alone ADV RB _ _ _ _ _ 31 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 not not PART RB _ _ _ _ _ 33 protect protect VERB VB VerbForm=Inf _ _ _ _ 34 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ _ 36 from from ADP IN _ _ _ _ _ 37 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 2864 # text = Treatment of HCD57 cells with SCF also activated PKB/Akt, but did not protect from apoptosis. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HCD57 HCD57 NUM CD NumType=Card _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 SCF SCF PROPN NNP Number=Sing _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 PKB PKB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 Akt Akt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 protect protect VERB VB VerbForm=Inf _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2865 # text = This result suggested that PKB/PI3-kinase activity is necessary but not sufficient to promote viability and/or proliferation. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 result result NOUN NN Number=Sing _ _ _ _ 3 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 PKB Pkb NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 / / PUNCT , _ _ _ _ SpaceAfter=No 7 PI3 PI3 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 -kinase -kinase NOUN NN Number=Sing _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 not not ADV RB _ _ _ _ _ 14 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 promote promote VERB VB VerbForm=Inf _ _ _ _ 17 viability viability NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ SpaceAfter=No 19 / / PUNCT , _ _ _ _ SpaceAfter=No 20 or or CCONJ CC _ _ _ _ _ 21 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2866 # text = Constitutive STAT5 activity, activated through an unknown pathway not including JAK2 or EPOR, may act in concert with the constitutive PI3-kinase/PKB/Akt pathway to protect the EPO-independent HCD57-SREI cells from apoptosis and promote limited proliferation. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 STAT5 stat5 NOUN NN Number=Sing _ _ _ _ 3 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 through through ADP IN _ _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 unknown unknown ADJ JJ Degree=Pos _ _ _ _ 9 pathway pathway NOUN NN Number=Sing _ _ _ _ 10 not not ADV RB _ _ _ _ _ 11 including include VERB VBG VerbForm=Ger _ _ _ _ 12 JAK2 JAK2 NUM CD NumType=Card _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 EPOR Epor PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 may may AUX MD VerbForm=Fin _ _ _ _ 17 act act VERB VB VerbForm=Inf _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 concert concert NOUN NN Number=Sing _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 23 PI3-kinase PI3-kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 / / PUNCT , _ _ _ _ SpaceAfter=No 25 PKB Pkb NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 / / PUNCT , _ _ _ _ SpaceAfter=No 27 Akt Akt ADJ JJS Degree=Sup _ _ _ _ 28 pathway pathway NOUN NN Number=Sing _ _ _ _ 29 to to PART TO _ _ _ _ _ 30 protect protect VERB VB VerbForm=Inf _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 EPO Epo PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 independent independent ADJ JJ Degree=Pos _ _ _ _ 35 HCD57-SREI Hcd57-srei ADJ JJ Degree=Pos _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ _ 37 from from ADP IN _ _ _ _ _ 38 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 promote promote VERB VB VerbForm=Inf _ _ _ _ 41 limited limited ADJ JJ Degree=Pos _ _ _ _ 42 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2867 # text = Document 003003337 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003337 003003337 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2868 # text = Clonality of isolated eosinophils in the hypereosinophilic syndrome. 1 Clonality Clonality NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 hypereosinophilic hypereosinophilic ADJ JJ Degree=Pos _ _ _ _ 8 syndrome syndrome NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2869 # text = The idiopathic hypereosinophilic syndrome (IHES) is a rare disorder characterized by unexplained, persistent eosinophilia associated with multiple organ dysfunction due to eosinophilic tissue infiltration. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 idiopathic idiopathic ADJ JJ Degree=Pos _ _ _ _ 3 hypereosinophilic hypereosinophilic ADJ JJ Degree=Pos _ _ _ _ 4 syndrome syndrome NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 IHES IHES PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 rare rare ADJ JJ Degree=Pos _ _ _ _ 11 disorder disorder NOUN NN Number=Sing _ _ _ _ 12 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 unexplained unexplain ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 persistent persistent ADJ JJ Degree=Pos _ _ _ _ 17 eosinophilia eosinophilia NOUN NN Number=Sing _ _ _ _ 18 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 21 organ organ ADJ JJ Degree=Pos _ _ _ _ 22 dysfunction dysfunction NOUN NN Number=Sing _ _ _ _ 23 due due ADP IN _ _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 eosinophilic eosinophilic ADJ JJ Degree=Pos _ _ _ _ 26 tissue tissue NOUN NN Number=Sing _ _ _ _ 27 infiltration infiltration NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2870 # text = In the absence of karyotypic abnormalities, there is no specific test to detect clonal eosinophilia in IHES. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 absence absence NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 karyotypic karyotypic ADJ JJ Degree=Pos _ _ _ _ 6 abnormalities abnormality NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 there there PRON EX _ _ _ _ _ 9 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 no no DET DT _ _ _ _ _ 11 specific specific ADJ JJ Degree=Pos _ _ _ _ 12 test test NOUN NN Number=Sing _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 detect detect VERB VB VerbForm=Inf _ _ _ _ 15 clonal clonal ADJ JJ Degree=Pos _ _ _ _ 16 eosinophilia eosinophilion NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 IHES IHES PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2871 # text = Analysis of X-chromosome inactivation patterns can be used to determine whether proliferative disorders are clonal in origin. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 X X PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 chromosome chromosome ADJ JJ Degree=Pos _ _ _ _ 6 inactivation inactivation NOUN NN Number=Sing _ _ _ _ 7 patterns pattern NOUN NNS Number=Plur _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 determine determine VERB VB VerbForm=Inf _ _ _ _ 13 whether whether SCONJ IN _ _ _ _ _ 14 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 15 disorders disorder NOUN NNS Number=Plur _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 clonal clonal ADJ JJ Degree=Pos _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 origin origin NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2872 # text = Methylation of HpaII and Hha I sites near the polymorphic trinucleotide repeat of the human androgen receptor gene (HUMARA) has been shown to correlate with X-inactivation. 1 Methylation Methylation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HpaII HpaII PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 Hha Hha PROPN NNP Number=Sing _ _ _ _ 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 sites site NOUN NNS Number=Plur _ _ _ _ 8 near near ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 polymorphic polymorphic ADJ JJ Degree=Pos _ _ _ _ 11 trinucleotide trinucleotide NOUN NN Number=Sing _ _ _ _ 12 repeat repeat NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 androgen androgen NOUN NN Number=Sing _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 HUMARA HUMARA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 24 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 correlate correlate VERB VB VerbForm=Inf _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 X x NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 inactivation inactivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2873 # text = In this study, we have used the polymerase chain reaction (PCR) with nested primers to analyze X-inactivation patterns of the HUMARA loci in purified eosinophils from female patients with eosinophilia. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 10 chain chain NOUN NN Number=Sing _ _ _ _ 11 reaction reaction NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 PCR PCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 nested nest ADJ JJ Degree=Pos _ _ _ _ 17 primers primer NOUN NNS Number=Plur _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 analyze analyze VERB VB VerbForm=Inf _ _ _ _ 20 X x NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 inactivation inactivation NOUN NN Number=Sing _ _ _ _ 23 patterns pattern NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 HUMARA HUMARA PROPN NNP Number=Sing _ _ _ _ 27 loci loci NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 purified purified ADJ JJ Degree=Pos _ _ _ _ 30 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ _ 31 from from ADP IN _ _ _ _ _ 32 female female ADJ JJ Degree=Pos _ _ _ _ 33 patients patient NOUN NNS Number=Plur _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 eosinophilia eosinophilia NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 2874 # text = Peripheral blood eosinophils were isolated by their autofluoresence using flow cytometric sorting. 1 Peripheral Peripheral ADJ JJ Degree=Pos _ _ _ _ 2 blood blood NOUN NN Number=Sing _ _ _ _ 3 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 isolated isolate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 8 autofluoresence autofluoresence NOUN NN Number=Sing _ _ _ _ 9 using use VERB VBG VerbForm=Ger _ _ _ _ 10 flow flow NOUN NN Number=Sing _ _ _ _ 11 cytometric cytometric NOUN NN Number=Sing _ _ _ _ 12 sorting sorting VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 2875 # text = Eosinophils purified from a female patient presenting with IHES were found to show a clonal pattern of X-inactivation. 1 Eosinophils Eosinophils NOUN NNS Number=Plur _ _ _ _ 2 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 female female ADJ JJ Degree=Pos _ _ _ _ 6 patient patient NOUN NN Number=Sing _ _ _ _ 7 presenting present VERB VBG VerbForm=Ger _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 IHES IHES PROPN NNP Number=Sing _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 show show VERB VB VerbForm=Inf _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 clonal clonal ADJ JJ Degree=Pos _ _ _ _ 16 pattern pattern NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 X x ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 -inactivation -inactivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2876 # text = Eosinophil-depleted leukocytes from this patient were polyclonal by HUMARA analysis, thus excluding skewedness of random X-inactivation. 1 Eosinophil Eosinophil PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 depleted deplet VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 patient patient NOUN NN Number=Sing _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 polyclonal polyclonal ADJ JJ Degree=Pos _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 HUMARA HUMARA PROPN NNP Number=Sing _ _ _ _ 12 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 thus thus ADV RB _ _ _ _ _ 15 excluding exclude VERB VBG VerbForm=Ger _ _ _ _ 16 skewedness skewedness NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 random random NOUN NN Number=Sing _ _ _ _ 19 X x NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 inactivation inactivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2877 # text = After corticosteroid suppression of her blood eosinophilia, a clonal population of eosinophils could no longer be detected in purified eosinophils. 1 After after ADP IN _ _ _ _ _ 2 corticosteroid corticosteroid ADJ JJ Degree=Pos _ _ _ _ 3 suppression suppression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 her she PRON PRP$ Gender=Fem|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 6 blood blood NOUN NN Number=Sing _ _ _ _ 7 eosinophilia eosinophilia NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 clonal clonal ADJ JJ Degree=Pos _ _ _ _ 11 population population NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ _ 14 could could AUX MD VerbForm=Fin _ _ _ _ 15 no no ADV RB _ _ _ _ _ 16 longer longer ADV RBR Degree=Cmp _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2878 # text = In contrast, eosinophils purified from a patient with Churg-Strauss syndrome and from six patients with reactive eosinophilias attributed to allergy, parasitic infection, or drug reaction showed a polyclonal pattern of X-inactivation by HUMARA analysis. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ _ 5 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 patient patient NOUN NN Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 Churg Churg PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 Strauss Strauss PROPN NNP Number=Sing _ _ _ _ 13 syndrome syndrome NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 six six NUM CD NumType=Card _ _ _ _ 17 patients patient NOUN NNS Number=Plur _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 20 eosinophilias eosinophilia NOUN NNS Number=Plur _ _ _ _ 21 attributed attribute VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 allergy allergy NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 parasitic parasitic ADJ JJ Degree=Pos _ _ _ _ 26 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 drug drug NOUN NN Number=Sing _ _ _ _ 30 reaction reaction NOUN NN Number=Sing _ _ _ _ 31 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 polyclonal polyclonal ADJ JJ Degree=Pos _ _ _ _ 34 pattern pattern NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 X x ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 -inactivation -inactivation NOUN NN Number=Sing _ _ _ _ 38 by by ADP IN _ _ _ _ _ 39 HUMARA HUMARA PROPN NNP Number=Sing _ _ _ _ 40 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 2879 # text = The finding of clonal eosinophilia in a patient presenting with IHES indicates that such patients may have, in reality, a low-grade clonal disorder that can be distinguished from reactive eosinophilias by HUMARA analysis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 finding finding NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 clonal clonal ADJ JJ Degree=Pos _ _ _ _ 5 eosinophilia eosinophilia NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 patient patient NOUN NN Number=Sing _ _ _ _ 9 presenting present VERB VBG VerbForm=Ger _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 IHES IHES PROPN NNP Number=Sing _ _ _ _ 12 indicates indicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 such such ADJ JJ Degree=Pos _ _ _ _ 15 patients patient NOUN NNS Number=Plur _ _ _ _ 16 may may AUX MD VerbForm=Fin _ _ _ _ 17 have have VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 reality reality NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 low low ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 grade grade NOUN NN Number=Sing _ _ _ _ 26 clonal clonal ADJ JJ Degree=Pos _ _ _ _ 27 disorder disorder NOUN NN Number=Sing _ _ _ _ 28 that that PRON WDT PronType=Rel _ _ _ _ 29 can can AUX MD VerbForm=Fin _ _ _ _ 30 be be AUX VB VerbForm=Inf _ _ _ _ 31 distinguished distinguish ADJ JJ Degree=Pos _ _ _ _ 32 from from ADP IN _ _ _ _ _ 33 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 34 eosinophilias eosinophilia NOUN NNS Number=Plur _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 HUMARA HUMARA ADJ JJ Degree=Pos _ _ _ _ 37 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 2880 # text = Further, the method described can be used to monitor disease progression. 1 Further further ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 method method NOUN NN Number=Sing _ _ _ _ 5 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 can can AUX MD VerbForm=Fin _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 monitor monitor VERB VB VerbForm=Inf _ _ _ _ 11 disease disease NOUN NN Number=Sing _ _ _ _ 12 progression progression NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2881 # text = Document 003003338 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003338 003003338 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2882 # text = Mice deficient for the 55 kd tumor necrosis factor receptor are resistant to endotoxic shock, yet succumb to L. monocytogenes infection. 1 Mice mice NOUN NN Number=Sing _ _ _ _ 2 deficient deficient NOUN NN Number=Sing _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 55 55 NUM CD NumType=Card _ _ _ _ 6 kd kd NOUN NN Number=Sing _ _ _ _ 7 tumor tumor NOUN NN Number=Sing _ _ _ _ 8 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 endotoxic endotoxic ADJ JJ Degree=Pos _ _ _ _ 15 shock shock NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 yet yet CCONJ CC _ _ _ _ _ 18 succumb succumb VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 L. L. PROPN NNP Number=Sing _ _ _ _ 21 monocytogenes monocytogene NOUN NNS Number=Plur _ _ _ _ 22 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2883 # text = The multiple biological activities of tumor necrosis factor (TNF) are mediated by two distinct cell surface receptors of 55 kd (TNFRp55) and 75 kd (TNFRp75). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 3 biological biological ADJ JJ Degree=Pos _ _ _ _ 4 activities activity NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 tumor tumor NOUN NN Number=Sing _ _ _ _ 7 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 two two NUM CD NumType=Card _ _ _ _ 16 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 surface surface NOUN NN Number=Sing _ _ _ _ 19 receptors receptor NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 55 55 NUM CD NumType=Card _ _ _ _ 22 kd k NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 TNFRp55 TNFRp55 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 75 75 NUM CD NumType=Card _ _ _ _ 28 kd kd NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 TNFRp75 Tnfrp75 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2884 # text = Using gene targeting, we generated a TNFRp55-deficient mouse strain. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 targeting targeting VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 generated generate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 TNFRp55 TNFRp55 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 deficient deficient NOUN NN Number=Sing _ _ _ _ 11 mouse mouse NOUN NN Number=Sing _ _ _ _ 12 strain strain NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 2885 # text = Cells from TNFRp55-/-mutant mice lack expression of TNFRp55 but display normal numbers of high affinity TNFRp75 molecules. 1 Cells cell NOUN NNS Number=Plur _ _ _ _ 2 from from ADP IN _ _ _ _ _ 3 TNFRp55 TNFRp55 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 -/- -/- PUNCT . _ _ _ _ SpaceAfter=No 5 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 6 mice mouse NOUN NN Number=Sing _ _ _ _ 7 lack lack NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 TNFRp55 TNFRp55 NUM CD NumType=Card _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 display display VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 normal normal ADJ JJ Degree=Pos _ _ _ _ 14 numbers number NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 high high ADJ JJ Degree=Pos _ _ _ _ 17 affinity affinity NOUN NN Number=Sing _ _ _ _ 18 TNFRp75 TNFRp75 NUM CD NumType=Card _ _ _ _ 19 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2886 # text = Thymocyte development and lymphocyte populations are unaltered, and clonal deletion of potentially self-reactive T cells is not impaired. 1 Thymocyte Thymocyte NOUN NN Number=Sing _ _ _ _ 2 development development NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 5 populations population NOUN NNS Number=Plur _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 unaltered unalter ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 clonal clonal ADJ JJ Degree=Pos _ _ _ _ 11 deletion deletion NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 potentially potentially ADV RB _ _ _ _ _ 14 self self NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 impaired impaire ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2887 # text = However, TNF signaling is largely abolished, as judged by the failure of TNF to induce NF-kappa B in T lymphocytes from TNFRp55-deficient mice. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 TNF TNF SCONJ IN _ _ _ _ _ 4 signaling signaling NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 largely largely ADV RB _ _ _ _ _ 7 abolished abolish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 as as SCONJ IN _ _ _ _ _ 10 judged judge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 failure failure NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 TNF TNF PROPN NNP Number=Sing _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 induce induce VERB VB VerbForm=Inf _ _ _ _ 18 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 25 from from ADP IN _ _ _ _ _ 26 TNFRp55 TNFRp55 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 29 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2888 # text = The loss of TNFRp55 function renders mice resistant to lethal dosages of either lipopolysaccharides or S. aureus enterotoxin B. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 loss loss NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 TNFRp55 TNFRp55 NUM CD NumType=Card _ _ _ _ 5 function function NOUN NN Number=Sing _ _ _ _ 6 renders render NOUN NNS Number=Plur _ _ _ _ 7 mice mouse NOUN NNS Number=Plur _ _ _ _ 8 resistant resistant VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 lethal lethal ADJ JJ Degree=Pos _ _ _ _ 11 dosages dosage NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 either either CCONJ CC _ _ _ _ _ 14 lipopolysaccharides lipopolysaccharide NOUN NNS Number=Plur _ _ _ _ 15 or or CCONJ CC _ _ _ _ _ 16 S. S. PROPN NNP Number=Sing _ _ _ _ 17 aureus aureus ADV RB _ _ _ _ _ 18 enterotoxin enterotoxin ADP IN _ _ _ _ _ 19 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2889 # text = In contrast, TNFRp55-deficient mice are severely impaired to clear L. monocytogenes and readily succumb to infection. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 TNFRp55 TNFRp55 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 deficient deficient NOUN NN Number=Sing _ _ _ _ 7 mice mouse NOUN NNS Number=Plur _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 severely severely ADV RB _ _ _ _ _ 10 impaired impaire VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 clear clear ADJ JJ Degree=Pos _ _ _ _ 13 L. L. PROPN NNP Number=Sing _ _ _ _ 14 monocytogenes monocytogene NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 readily readily ADV RB _ _ _ _ _ 17 succumb succumb VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2890 # text = Thus, the 55 kd TNFR plays a decisive role in the host's defense against microorganisms and their pathogenic factors. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 55 55 NUM CD NumType=Card _ _ _ _ 5 kd kd NOUN NN Number=Sing _ _ _ _ 6 TNFR Tnfr PROPN NNP Number=Sing _ _ _ _ 7 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 decisive decisive ADJ JJ Degree=Pos _ _ _ _ 10 role role NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 host host NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 's 's PART POS _ _ _ _ _ 15 defense defense NOUN NN Number=Sing _ _ _ _ 16 against against ADP IN _ _ _ _ _ 17 microorganisms microorganism NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 pathogenic pathogenic ADJ JJ Degree=Pos _ _ _ _ 21 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2891 # text = Document 003003339 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003339 003003339 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2892 # text = T helper differentiation proceeds through Stat1-dependent, Stat4-dependent and Stat4-independent phases. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 helper helper ADJ JJR Degree=Cmp _ _ _ _ 3 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 4 proceeds proceed NOUN NNS Number=Plur _ _ _ _ 5 through through ADP IN _ _ _ _ _ 6 Stat1 Stat1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 Stat4 Stat4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 Stat4 Stat4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 independent independent ADJ JJ Degree=Pos _ _ _ _ 17 phases phase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2893 # text = Much of our focus in understanding Th1/Th2 development has been on the signals delivered by IL-12 and IL-4 as final determinants of terminal T cell differentiation. 1 Much much ADJ JJ Degree=Pos _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 focus focus NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 understanding understanding NOUN NN Number=Sing _ _ _ _ 7 Th1 th1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 Th2 Th2 NUM CD NumType=Card _ _ _ _ 10 development development NOUN NN Number=Sing _ _ _ _ 11 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 signals signal NOUN NNS Number=Plur _ _ _ _ 16 delivered deliver VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 12 12 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 4 4 NUM CD NumType=Card _ _ _ _ 25 as as ADP IN _ _ _ _ _ 26 final final ADJ JJ Degree=Pos _ _ _ _ 27 determinants determinant NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 30 T T PROPN NNP Number=Sing _ _ _ _ 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 2894 # text = Because extinction of IL-12 signaling in early Th2 development could potentially be important in imprinting a more permanent Th2 phenotype on a population of T cells, we have also examined various parameters regulating the IL-12 signaling pathway. 1 Because because SCONJ IN _ _ _ _ _ 2 extinction extinction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 12 12 NUM CD NumType=Card _ _ _ _ 7 signaling signaling NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 early early ADJ JJ Degree=Pos _ _ _ _ 10 Th2 Th2 NUM CD NumType=Card _ _ _ _ 11 development development NOUN NN Number=Sing _ _ _ _ 12 could could AUX MD VerbForm=Fin _ _ _ _ 13 potentially potentially ADV RB _ _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 important important ADJ JJ Degree=Pos _ _ _ _ 16 in in SCONJ IN _ _ _ _ _ 17 imprinting imprint VERB VBG VerbForm=Ger _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 more more ADV RBR _ _ _ _ _ 20 permanent permanent ADJ JJ Degree=Pos _ _ _ _ 21 Th2 Th2 NUM CD NumType=Card _ _ _ _ 22 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 23 on on ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 population population NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 T t PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 31 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 32 also also ADV RB _ _ _ _ _ 33 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 various various ADJ JJ Degree=Pos _ _ _ _ 35 parameters parameter NOUN NNS Number=Plur _ _ _ _ 36 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 12 12 NUM CD NumType=Card _ _ _ _ 41 signaling signaling NOUN NN Number=Sing _ _ _ _ 42 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 2895 # text = Whereas IL-4 appears to repress functional IL-12 signaling through inhibition of IL-12R beta 2 expression, IFN-gamma in the mouse, and IFN-alpha in the human appear to induce IL-12R beta 2 expression and promote IL-12 responsiveness. 1 Whereas whereas PROPN NNP Number=Sing _ _ _ _ 2 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 4 4 NUM CD NumType=Card _ _ _ _ 5 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 repress repress VERB VB VerbForm=Inf _ _ _ _ 8 functional functional ADJ JJ Degree=Pos _ _ _ _ 9 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - SYM SYM _ _ _ _ SpaceAfter=No 11 12 12 NUM CD NumType=Card _ _ _ _ 12 signaling signaling VERB VBG VerbForm=Ger _ _ _ _ 13 through through ADP IN _ _ _ _ _ 14 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 IL- IL- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 12R 12R NOUN NN Number=Sing _ _ _ _ 18 beta beta NOUN NN Number=Sing _ _ _ _ 19 2 2 NUM CD NumType=Card _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 gamma gamma NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 mouse mouse NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 IFN Ifn ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 alpha alpha NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 human human ADJ JJ Degree=Pos _ _ _ _ 36 appear appear NOUN NN Number=Sing _ _ _ _ 37 to to PART TO _ _ _ _ _ 38 induce induce VERB VB VerbForm=Inf _ _ _ _ 39 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 -12R -12R PROPN NNP Number=Sing _ _ _ _ 41 beta beta NOUN NN Number=Sing _ _ _ _ 42 2 2 NUM CD NumType=Card _ _ _ _ 43 expression expression NOUN NN Number=Sing _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 promote promote VERB VB VerbForm=Inf _ _ _ _ 46 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 12 12 NUM CD NumType=Card _ _ _ _ 49 responsiveness responsiveness NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 2896 # text = We propose that Th1 development can be considered in two stages, capacitance and development. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 Th1 Th1 NUM CD NumType=Card _ _ _ _ 5 development development NOUN NN Number=Sing _ _ _ _ 6 can can AUX MD VerbForm=Fin _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 considered consider VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 two two NUM CD NumType=Card _ _ _ _ 11 stages stage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 capacitance capacitance NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2897 # text = Capacitance would simply involve expression of IL-12R beta 1 and beta 2 subunits, regulated by TCR, IL-4 and IFNs. 1 Capacitance Capacitance NOUN NN Number=Sing _ _ _ _ 2 would would AUX MD VerbForm=Fin _ _ _ _ 3 simply simply ADV RB _ _ _ _ _ 4 involve involve VERB VB VerbForm=Inf _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 IL- IL- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 12R 12R NOUN NN Number=Sing _ _ _ _ 9 beta beta NOUN NN Number=Sing _ _ _ _ 10 1 1 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 beta beta NOUN NN Number=Sing _ _ _ _ 13 2 2 NUM CD NumType=Card _ _ _ _ 14 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - SYM SYM _ _ _ _ SpaceAfter=No 22 4 4 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 IFNs IFNs PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2898 # text = The second stage, development, we propose is the true IL-12 induced developmental stage, involving expression of Stat4 inducible proteins. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 stage stage NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 8 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 true true ADJ JJ Degree=Pos _ _ _ _ 12 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - SYM SYM _ _ _ _ SpaceAfter=No 14 12 12 NUM CD NumType=Card _ _ _ _ 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 17 stage stage NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 involving involve VERB VBG VerbForm=Ger _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 Stat4 Stat4 NUM CD NumType=Card _ _ _ _ 23 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 24 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2899 # text = In the human, this may also occur via IFN-alpha, which is able to activate Stat4. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 human human NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 6 may may AUX MD VerbForm=Fin _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 occur occur VERB VB VerbForm=Inf _ _ _ _ 9 via via ADP IN _ _ _ _ _ 10 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 able able ADJ JJ Degree=Pos _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 activate activate VERB VB VerbForm=Inf _ _ _ _ 19 Stat4 Stat4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 2900 # text = It is perhaps possible that all of Stat4 actions on Th1 development may be exert directly by Stat4 at the IFN-gamma gene, however we suggest that, more likely, Stat4 may act to induce Th1 development through the induction of other non-cytokine genes, whose stable expression maintains the transcriptional state of a Th1 cell. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 perhaps perhaps ADV RB _ _ _ _ _ 4 possible possible ADJ JJ Degree=Pos _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 all all DET DT _ _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Stat4 Stat4 NUM CD NumType=Card _ _ _ _ 9 actions action NOUN NNS Number=Plur _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 Th1 th1 NUM CD NumType=Card _ _ _ _ 12 development development NOUN NN Number=Sing _ _ _ _ 13 may may AUX MD VerbForm=Fin _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 exert exert VERB VB VerbForm=Inf _ _ _ _ 16 directly directly ADV RB _ _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 Stat4 Stat4 PROPN NNP Number=Sing _ _ _ _ 19 at at ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 gamma gamma NOUN NN Number=Sing _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 however however ADV RB _ _ _ _ _ 27 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 28 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 more more ADV RBR _ _ _ _ _ 32 likely likely ADV RB _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 Stat4 Stat4 PROPN NNP Number=Sing _ _ _ _ 35 may may AUX MD VerbForm=Fin _ _ _ _ 36 act act VERB VB VerbForm=Inf _ _ _ _ 37 to to PART TO _ _ _ _ _ 38 induce induce VERB VB VerbForm=Inf _ _ _ _ 39 Th1 Th1 NUM CD NumType=Card _ _ _ _ 40 development development NOUN NN Number=Sing _ _ _ _ 41 through through ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 induction induction NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 other other ADJ JJ Degree=Pos _ _ _ _ 46 non-cytokine non-cytokine ADJ JJ Degree=Pos _ _ _ _ 47 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 50 stable stable ADJ JJ Degree=Pos _ _ _ _ 51 expression expression NOUN NN Number=Sing _ _ _ _ 52 maintains maintain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 53 the the DET DT Definite=Def|PronType=Art _ _ _ _ 54 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 55 state state NOUN NN Number=Sing _ _ _ _ 56 of of ADP IN _ _ _ _ _ 57 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 58 Th1 Th1 NUM CD NumType=Card _ _ _ _ 59 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2901 # text = Document 003003343 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003343 003003343 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2902 # text = Differential inhibition of Smad6 and Smad7 on bone morphogenetic protein- and activin-mediated growth arrest and apoptosis in B cells. 1 Differential differential ADJ JJ Degree=Pos _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Smad6 Smad6 NUM CD NumType=Card _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 Smad7 Smad7 NUM CD NumType=Card _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 bone bone PRON NN Number=Sing _ _ _ _ 9 morphogenetic morphogenetic ADJ JJ Degree=Pos _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 activin activin NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 growth growth NOUN NN Number=Sing _ _ _ _ 17 arrest arrest NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 B b ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2903 # text = Smad6 and Smad7 prevent ligand-induced activation of signal-transducing Smad proteins in the transforming growth factor-beta family. 1 Smad6 Smad6 PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 Smad7 Smad7 NUM CD NumType=Card _ _ _ _ 4 prevent prevent ADJ JJ Degree=Pos _ _ _ _ 5 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 transducing transducing VERB VBG VerbForm=Ger _ _ _ _ 13 Smad Smad ADJ JJ Degree=Pos _ _ _ _ 14 proteins protein NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 transforming transforming VERB VBG VerbForm=Ger _ _ _ _ 18 growth growth NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 beta beta NOUN NN Number=Sing _ _ _ _ 22 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2904 # text = Here we demonstrate that both Smad6 and Smad7 are human bone morphogenetic protein-2 (hBMP-2)-inducible antagonists of hBMP-2-induced growth arrest and apoptosis in mouse B cell hybridoma HS-72 cells. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 both both DET DT _ _ _ _ _ 6 Smad6 smad6 NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 Smad7 Smad7 NOUN NN Number=Sing _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 bone bone NOUN NN Number=Sing _ _ _ _ 12 morphogenetic morphogenetic ADJ JJ Degree=Pos _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 hBMP hbmp NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 23 antagonists antagonist NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 hBMP hbmp NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 growth growth NOUN NN Number=Sing _ _ _ _ 31 arrest arrest NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 mouse mouse NOUN NN Number=Sing _ _ _ _ 36 B b NOUN NN Number=Sing _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 hybridoma hybridoma NOUN NN Number=Sing _ _ _ _ 39 HS h NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 - - PUNCT , _ _ _ _ SpaceAfter=No 41 72 72 NUM CD NumType=Card _ _ _ _ 42 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 2905 # text = Moreover, we confirmed that the ectopic expressions of Smad6 and Smad7 inhibited the hBMP-2-induced Smad1/Smad5 phosphorylation. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 confirmed confirm VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 ectopic ectopic ADJ JJ Degree=Pos _ _ _ _ 8 expressions expression NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 Smad6 Smad6 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 Smad7 Smad7 NUM CD NumType=Card _ _ _ _ 13 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 hBMP hbmp NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 Smad1 smad1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 Smad5 smad5 NUM CD NumType=Card _ _ _ _ 23 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2906 # text = We previously reported that Smad7 is an activin A-inducible antagonist of activin A-induced growth arrest and apoptosis in HS-72 cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 previously previously ADV RB _ _ _ _ _ 3 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 Smad7 Smad7 NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 activin activin NOUN NN Number=Sing _ _ _ _ 9 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 12 antagonist antagonist NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 activin activin NOUN NN Number=Sing _ _ _ _ 15 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 growth growth NOUN NN Number=Sing _ _ _ _ 19 arrest arrest NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 HS HS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 72 72 NUM CD NumType=Card _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2907 # text = Interestingly, although mRNA expression of Smad6 was induced by activin A in HS-72 cells, Smad6 showed no antagonistic effect on activin A-induced growth arrest and apoptosis. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 although although SCONJ IN _ _ _ _ _ 4 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Smad6 smad6 PROPN NNP Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 activin activin NOUN NN Number=Sing _ _ _ _ 12 A a NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 HS HS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 72 72 NUM CD NumType=Card _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 Smad6 Smad6 PROPN NNP Number=Sing _ _ _ _ 20 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 no no DET DT _ _ _ _ _ 22 antagonistic antagonistic ADJ JJ Degree=Pos _ _ _ _ 23 effect effect NOUN NN Number=Sing _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 activin activin ADP IN _ _ _ _ _ 26 A a DET DT Definite=Ind|PronType=Art _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 growth growth NOUN NN Number=Sing _ _ _ _ 30 arrest arrest NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 2908 # text = Moreover, we found that the ectopic expression of Smad7, but not Smad6, inhibited the activin A-induced Smad2 phosphorylation in HS-72 cells. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 ectopic ectopic ADJ JJ Degree=Pos _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 Smad7 Smad7 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 not not ADV RB _ _ _ _ _ 14 Smad6 Smad6 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 activin activin NOUN NN Number=Sing _ _ _ _ 19 A a DET DT Definite=Ind|PronType=Art _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 Smad2 smad2 NOUN NN Number=Sing _ _ _ _ 23 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 HS HS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 72 72 NUM CD NumType=Card _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 2909 # text = Thus, Smad6 and Smad7 exhibit differential inhibitory effects in bone morphogenetic protein-2- and activin 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Smad6 Smad6 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 Smad7 Smad7 NUM CD NumType=Card _ _ _ _ 6 exhibit exhibit NOUN NN Number=Sing _ _ _ _ 7 differential differential ADJ JJ Degree=Pos _ _ _ _ 8 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 9 effects effect NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 bone bone ADJ JJ Degree=Pos _ _ _ _ 12 morphogenetic morphogenetic ADJ JJ Degree=Pos _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 activin activin NOUN NN Number=Sing _ _ _ _ # sent_id = 2910 # text = A-mediated signaling in B lineage cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 signaling signaling NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 B b ADJ JJ Degree=Pos _ _ _ _ 7 lineage lineage NOUN NN Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2911 # text = Document 003003344 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003344 003003344 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2912 # text = The interleukin-5/receptor interaction activates Lyn and Jak2 tyrosine kinases and propagates signals via the Ras-Raf-1-MAP kinase and the Jak-STAT pathways in eosinophils. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 interaction interaction NOUN NN Number=Sing _ _ _ _ 8 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 Lyn Lyn PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 Jak2 Jak2 NUM CD NumType=Card _ _ _ _ 12 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 13 kinases kinase NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 propagates propagate NOUN NNS Number=Plur _ _ _ _ 16 signals signal NOUN NNS Number=Plur _ _ _ _ 17 via via ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 Ras Ras PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 MAP map NOUN NN Number=Sing _ _ _ _ 26 kinase kinase NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 Jak Jak PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 STAT Stat PROPN NNP Number=Sing _ _ _ _ 32 pathways pathway NOUN NNS Number=Plur _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2913 # text = We have shown that the interaction of interleukin (IL)-5 with the receptor activates Lyn tyrosine kinase within 1 min and Jak2 tyrosine kinase within 1-3 min. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 interaction interaction NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 5 5 NUM CD NumType=Card _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ _ 17 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 Lyn Lyn PROPN NNP Number=Sing _ _ _ _ 19 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 20 kinase kinase NOUN NN Number=Sing _ _ _ _ 21 within within ADP IN _ _ _ _ _ 22 1 1 NUM CD NumType=Card _ _ _ _ 23 min min NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 Jak2 Jak2 NUM CD NumType=Card _ _ _ _ 26 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 27 kinase kinase NOUN NN Number=Sing _ _ _ _ 28 within within ADP IN _ _ _ _ _ 29 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 - - SYM SYM _ _ _ _ SpaceAfter=No 31 3 3 NUM CD NumType=Card _ _ _ _ 32 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 2914 # text = IL-5 also stimulates GTP binding to p21ras. 1 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 5 5 NUM CD NumType=Card _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 GTP GTP PROPN NNP Number=Sing _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 p21ras p21ra NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 2915 # text = The signal is subsequently propagated through the activation of Raf-1, MEK, and MAP kinases as shown by their increased autophosphorylation in vitro and phosphorylation in situ. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 signal signal NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 subsequently subsequently ADV RB _ _ _ _ _ 5 propagated propagate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 through through ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 MEK MEK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 MAP map ADJ JJ Degree=Pos _ _ _ _ 18 kinases kinase NOUN NNS Number=Plur _ _ _ _ 19 as as SCONJ IN _ _ _ _ _ 20 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 23 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 autophosphorylation autophosphorylation NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 vitro vitro NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 situ situ NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 2916 # text = Jak2 kinase has been shown to phosphorylate 1 Jak2 Jak2 NUM CD NumType=Card _ _ _ _ 2 kinase kinase NOUN NN Number=Sing _ _ _ _ 3 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 phosphorylate phosphorylate VERB VB VerbForm=Inf _ _ _ _ # sent_id = 2917 # text = STAT nuclear proteins. 1 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ _ # sent_id = 2918 # text = The activation of STAT nuclear factors was studied by electrophoretic mobility shift assay using a gamma activation site (GAS) probe. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 factors factor NOUN NNS Number=Plur _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 11 mobility mobility NOUN NN Number=Sing _ _ _ _ 12 shift shift NOUN NN Number=Sing _ _ _ _ 13 assay assay NOUN NN Number=Sing _ _ _ _ 14 using use VERB VBG VerbForm=Ger _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 gamma gamma NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 GAS gas PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 probe probe NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2919 # text = We found that IL-5 induces two GAS-binding proteins in eosinophils, one of which is STAT1. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 5 5 NUM CD NumType=Card _ _ _ _ 7 induces induce NOUN NNS Number=Plur _ _ _ _ 8 two two NUM CD NumType=Card _ _ _ _ 9 GAS Ga NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 proteins protein NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 one one NUM CD NumType=Card _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 which which PRON WDT PronType=Int _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 STAT1 STAT1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2920 # text = We conclude that IL-5 induced signals are propagated through two distinct pathways: (1) Lyn-->Ras-->Raf-1-->MEK-->MAP kinase and (2) Jak2-->STAT1. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 5 5 NUM CD NumType=Card _ _ _ _ 7 induced induced ADJ JJ Degree=Pos _ _ _ _ 8 signals signal NOUN NNS Number=Plur _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 propagated propagate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 through through ADP IN _ _ _ _ _ 12 two two NUM CD NumType=Card _ _ _ _ 13 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 14 pathways pathways NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 : : PUNCT : _ _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 1 1 X LS _ _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 Lyn Lyn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 --> --> PUNCT , _ _ _ _ SpaceAfter=No 21 Ras Ras PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 --> --> PUNCT , _ _ _ _ SpaceAfter=No 23 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 1--> 1--> SYM NFP _ _ _ _ SpaceAfter=No 26 MEK MEK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 --> --> SYM NFP _ _ _ _ SpaceAfter=No 28 MAP map NOUN NN Number=Sing _ _ _ _ 29 kinase kinase NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 2 2 X LS _ _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 Jak2 Jak2 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 --> --> SYM NFP _ _ _ _ SpaceAfter=No 36 STAT1 stat1 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2921 # text = Document 003003345 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003345 003003345 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2922 # text = Analysis of the modulation of transcriptional activity in myelopoiesis and leukemogenesis. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 modulation modulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 myelopoiesis myelopoiesis NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 leukemogenesis leukemogenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2923 # text = Acute myeloid leukemia (AML) is still associated with a mortality of 60 to 80%. 1 Acute Acute ADJ JJ Degree=Pos _ _ _ _ 2 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 3 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 AML AML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 still still ADV RB _ _ _ _ _ 9 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 mortality mortality NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 60 60 NUM CD NumType=Card _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 80% 80% SYM NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2924 # text = AML is characterized by a block in myeloid differentiation. 1 AML AML ADV RB _ _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 characterized characterize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 block block NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 9 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 2925 # text = The transcription factors PU.1 and C/EBPalpha are responsible for normal myeloid differentiation from stem cells to monocytes or granulocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 PU.1 PU.1 PROPN NNP Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 EBPalpha EBPalpha PROPN NNP Number=Sing _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 normal normal ADJ JJ Degree=Pos _ _ _ _ 13 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 14 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 stem stem NOUN NN Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2926 # text = In particular, PU.1 induces expression of the macrophage colony-stimulating factor (M-CSF) receptor and the development of monocytes, whereas C/EBPalpha increases the expression of the granulocyte colony-stimulating factor (G-CSF) receptor and leads to mature granulocytes. 1 In in ADP IN _ _ _ _ _ 2 particular particular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 PU.1 PU.1 NUM CD NumType=Card _ _ _ _ 5 induces induce NOUN NNS Number=Plur _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 10 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 stimulating stimulating NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 CSF Csf NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 receptor receptor NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 development development NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 whereas whereas SCONJ IN _ _ _ _ _ 27 C/ C/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 EBPalpha EBPalpha PROPN NNP Number=Sing _ _ _ _ 29 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 expression expression NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 granulocyte granulocyte NOUN NN Number=Sing _ _ _ _ 35 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 38 factor factor NOUN NN Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 G- G- NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 CSF CSF NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 receptor receptor NOUN NN Number=Sing _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 leads lead NOUN NNS Number=Plur _ _ _ _ 46 to to ADP IN _ _ _ _ _ 47 mature mature ADJ JJ Degree=Pos _ _ _ _ 48 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 2927 # text = In AML, chromosomal aberrations result in oncoproteins such as AML1/ETO, PML/RARalpha, or activated Ras, which can deregulate genes important for normal myelopoiesis. 1 In in ADP IN _ _ _ _ _ 2 AML aml ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 chromosomal chromosomal ADJ JJ Degree=Pos _ _ _ _ 5 aberrations aberration NOUN NNS Number=Plur _ _ _ _ 6 result result VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 oncoproteins oncoprotein NOUN NNS Number=Plur _ _ _ _ 9 such such ADJ JJ Degree=Pos _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 AML1/ Aml1/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 12 ETO ETO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 PML PML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 RARalpha RARalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 Ras Ras PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 can can AUX MD VerbForm=Fin _ _ _ _ 24 deregulate deregulate VERB VB VerbForm=Inf _ _ _ _ 25 genes gene NOUN NNS Number=Plur _ _ _ _ 26 important important ADJ JJ Degree=Pos _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 normal normal ADJ JJ Degree=Pos _ _ _ _ 29 myelopoiesis myelopoiesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2928 # text = Thus, AML1/ETO can bind to the transcription factor C/EBPalpha, inhibit C/EBPalpha-dependent transcription, and block granulocytic differentiation. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 AML1/ AML1/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 4 ETO ETO PROPN NNP Number=Sing _ _ _ _ 5 can can AUX MD VerbForm=Fin _ _ _ _ 6 bind bind VERB VB VerbForm=Inf _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 EBPalpha EBPalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 inhibit inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 C/EBPalpha C/EBPalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 block block ADJ JJ Degree=Pos _ _ _ _ 23 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 24 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 2929 # text = However, AML1/ETO can also synergize with the transcription factor AML1 to enhance the activity of the M-CSF receptor promoter. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 AML1/ETO AML1/ETO PROPN NNP Number=Sing _ _ _ _ 4 can can AUX MD VerbForm=Fin _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 synergize synergize VERB VB VerbForm=Inf _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 AML1 Aml1 NOUN NN Number=Sing _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 CSF Csf NOUN NN Number=Sing _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2930 # text = On the other hand, the PML/RARalpha fusion protein causes transcriptional repression by recruiting the nuclear corepressor (N-CoR) histone deacetylase complex to the DNA, which results in decreased histone acetylation and a repressive chromatin organization. 1 On on ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 hand hand NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 PML PML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 RARalpha RARalpha PROPN NNP Number=Sing _ _ _ _ 10 fusion fusion NOUN NN Number=Sing _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 causes cause NOUN NNS Number=Plur _ _ _ _ 13 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 14 repression repression NOUN NN Number=Sing _ _ _ _ 15 by by SCONJ IN _ _ _ _ _ 16 recruiting recruit VERB VBG VerbForm=Ger _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 corepressor corepressor NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 N and PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 CoR CoR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 histone histone NOUN NN Number=Sing _ _ _ _ 26 deacetylase deacetylase NOUN NN Number=Sing _ _ _ _ 27 complex complex NOUN NN Number=Sing _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 which which DET WDT PronType=Int _ _ _ _ 33 results result NOUN NNS Number=Plur _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 histone histone NOUN NN Number=Sing _ _ _ _ 37 acetylation acetylation NOUN NN Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 repressive repressive ADJ JJ Degree=Pos _ _ _ _ 41 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 42 organization organization NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 2931 # text = Here we describe methods to investigate whether and how signaling agonists induce myeloid differentiation and how oncoproteins might cause AML by modulating the activity of transcription factors that are pivotal for normal myeloid development. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 describe describe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 methods method NOUN NNS Number=Plur _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 7 whether whether SCONJ IN _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 how how ADV WRB PronType=Int _ _ _ _ 10 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 11 agonists agonist NOUN NNS Number=Plur _ _ _ _ 12 induce induce ADV RB _ _ _ _ _ 13 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 14 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 how how ADV WRB PronType=Int _ _ _ _ 17 oncoproteins oncoprotein NOUN NNS Number=Plur _ _ _ _ 18 might might AUX MD VerbForm=Fin _ _ _ _ 19 cause cause VERB VB VerbForm=Inf _ _ _ _ 20 AML AML ADV RB _ _ _ _ _ 21 by by SCONJ IN _ _ _ _ _ 22 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 factors factor NOUN NNS Number=Plur _ _ _ _ 28 that that PRON WDT PronType=Rel _ _ _ _ 29 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 pivotal pivotal ADJ JJ Degree=Pos _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 normal normal ADJ JJ Degree=Pos _ _ _ _ 33 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 34 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 2932 # text = Copyright 1999 Academic Press. 1 Copyright copyright NOUN NN Number=Sing _ _ _ _ 2 1999 1999 NUM CD NumType=Card _ _ _ _ 3 Academic academic PROPN NNP Number=Sing _ _ _ _ 4 Press. Press. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2933 # text = Document 003003348 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003348 003003348 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2934 # text = Interferon-beta mediates stromal cell rescue of T cells from apoptosis. 1 Interferon Interferon PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 beta beta NOUN NN Number=Sing _ _ _ _ 4 mediates mediate NOUN NNS Number=Plur _ _ _ _ 5 stromal stromal ADJ JJ Degree=Pos _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 rescue rescue NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2935 # text = The resolution of immune responses is characterized by extensive apoptosis of activated T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 resolution resolution NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 immune immune ADJ JJ Degree=Pos _ _ _ _ 5 responses response NOUN NNS Number=Plur _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 characterized characterize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 extensive extensive ADJ JJ Degree=Pos _ _ _ _ 10 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 2936 # text = However, to generate and maintain immunological memory, some antigen-specific T cells must survive and revert to a resting G0/G1 state. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 generate generate VERB VB VerbForm=Inf _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 maintain maintain VERB VB VerbForm=Inf _ _ _ _ 7 immunological immunological ADJ JJ Degree=Pos _ _ _ _ 8 memory memory NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 some some DET DT _ _ _ _ _ 11 antigen-specific antigen-specific ADJ JJ Degree=Pos _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 must must AUX MD VerbForm=Fin _ _ _ _ 15 survive survive VERB VB VerbForm=Inf _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 revert revert VERB VB VerbForm=Inf _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 resting reste VERB VBG VerbForm=Ger _ _ _ _ 21 G0/G1 G0/g1 NOUN NN Number=Sing _ _ _ _ 22 state state NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2937 # text = Cytokines that bind to the common gamma chain of the IL-2 receptor promote the survival of T cell blasts, but also induce proliferation. 1 Cytokines Cytokine NOUN NNS Number=Plur _ _ _ _ 2 that that PRON WDT PronType=Rel _ _ _ _ 3 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 common common ADJ JJ Degree=Pos _ _ _ _ 7 gamma gamma NOUN NN Number=Sing _ _ _ _ 8 chain chain NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 promote promote VERB VB VerbForm=Inf _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 survival survival NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 blasts blast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 but but CCONJ CC _ _ _ _ _ 24 also also ADV RB _ _ _ _ _ 25 induce induce ADJ JJ Degree=Pos _ _ _ _ 26 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2938 # text = In contrast, soluble factors secreted by stromal cells induce 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 5 factors factor NOUN NNS Number=Plur _ _ _ _ 6 secreted secret VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 stromal stromal ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 induce induce NOUN NN Number=Sing _ _ _ _ # sent_id = 2939 # text = Tcell survival in a resting G0/G1 state. 1 Tcell Tcell VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 survival survival NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 resting resting NOUN NN Number=Sing _ _ _ _ 6 G0/G1 G0/G1 NUM CD NumType=Card _ _ _ _ 7 state state NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 2940 # text = We now report that interferon-beta is the principal mediator of stromal cell-mediated 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 now now ADV RB _ _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 beta beta NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 principal principal NOUN NN Number=Sing _ _ _ _ 11 mediator mediator NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 stromal stromal ADJ JJ Degree=Pos _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ # sent_id = 2941 # text = Tcell rescue from apoptosis. 1 Tcell Tcell ADJ JJ Degree=Pos _ _ _ _ 2 rescue rescue NOUN NN Number=Sing _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 5 . . PUNCT . _ _ _ _ _ # sent_id = 2942 # text = Interferon-alpha and -beta promote the reversion of blast Tcells to a resting G0/G1 configuration with all the characteristic features of stromal cell rescue; such as high Bcl-XL expression and low Bcl-2. 1 Interferon Interferon PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 alpha alpha NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 beta beta PART TO Abbr=Yes _ _ _ _ 7 promote promote VERB VB VerbForm=Inf _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 reversion reversion NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 blast blast ADJ JJ Degree=Pos _ _ _ _ 12 Tcells Tcell NOUN NNS Number=Plur _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 resting reste VERB VBG VerbForm=Ger _ _ _ _ 16 G0/G1 G0/g1 NOUN NN Number=Sing _ _ _ _ 17 configuration configuration NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 all all DET PDT _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 characteristic characteristic ADJ JJ Degree=Pos _ _ _ _ 22 features feature NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 stromal stromal ADJ JJ Degree=Pos _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 rescue rescue NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ; ; PUNCT , _ _ _ _ _ 28 such such ADJ JJ Degree=Pos _ _ _ _ 29 as as ADP IN _ _ _ _ _ 30 high high ADJ JJ Degree=Pos _ _ _ _ 31 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 XL XL PROPN NNP Number=Sing _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 low low ADJ JJ Degree=Pos _ _ _ _ 37 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 2943 # text = Type I interferons and stromal cells stimulate apparently identical signaling pathways, leading to STAT-1 activation. 1 Type type NOUN NN Number=Sing _ _ _ _ 2 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 3 interferons interferon NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 stromal stromal ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 stimulate stimulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 apparently apparently ADV RB _ _ _ _ _ 9 identical identical ADJ JJ Degree=Pos _ _ _ _ 10 signaling signaling NOUN NN Number=Sing _ _ _ _ 11 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 leading lead VERB VBG VerbForm=Ger _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 STAT STAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2944 # text = We also show that this mechanism may play a fundamental role in the persistence of T cells at sites of chronic inflammation; suggesting that chronic inflammation is an aberrant consequence of immunological memory. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 7 may may AUX MD VerbForm=Fin _ _ _ _ 8 play play VERB VB VerbForm=Inf _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 fundamental fundamental ADJ JJ Degree=Pos _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 persistence persistence NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 at at ADP IN _ _ _ _ _ 19 sites site NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 22 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ; ; PUNCT , _ _ _ _ _ 24 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 27 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 aberrant aberrant ADJ JJ Degree=Pos _ _ _ _ 31 consequence consequence NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 immunological immunological ADJ JJ Degree=Pos _ _ _ _ 34 memory memory NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2945 # text = Document 003003351 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003351 003003351 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2946 # text = Effects of intranasal glucocorticoids on endogenous glucocorticoid peripheral and central function. 1 Effects Effects NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 intranasal intranasal ADJ JJ Degree=Pos _ _ _ _ 4 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 7 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ _ 8 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 central central ADJ JJ Degree=Pos _ _ _ _ 11 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2947 # text = Glucocorticoids are among the most potent antiinflammatory agents that can be used in the treatment of rhinitis. 1 Glucocorticoids Glucocorticoid NOUN NNS Number=Plur _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 among among ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 most most ADV RBS _ _ _ _ _ 6 potent potent ADJ JJ Degree=Pos _ _ _ _ 7 antiinflammatory antiinflammatory ADJ JJ Degree=Pos _ _ _ _ 8 agents agent NOUN NNS Number=Plur _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 can can AUX MD VerbForm=Fin _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 treatment treatment NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 rhinitis rhinitis NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2948 # text = Their mechanisms of action are multiple and complex and a number of reports describe significant systemic effects of locally administered glucocorticoids. 1 Their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 2 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 action action NOUN NN Number=Sing _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 complex complex ADJ JJ Degree=Pos _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 number number NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 reports report NOUN NNS Number=Plur _ _ _ _ 14 describe describe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 significant significant ADJ JJ Degree=Pos _ _ _ _ 16 systemic systemic ADJ JJ Degree=Pos _ _ _ _ 17 effects effect NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 locally locally ADV RB _ _ _ _ _ 20 administered administer VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2949 # text = In order to evaluate the short-term systemic effects of intranasally administered glucocorticoids, 14 normal healthy subjects were treated with two doses of either budesonide (BUD) or fluticasone propionate (FP) for 2 weeks. 1 In in ADP IN _ _ _ _ _ 2 order order NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 evaluate evaluate VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 short short ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 term term NOUN NN Number=Sing _ _ _ _ 9 systemic systemic NOUN NN Number=Sing _ _ _ _ 10 effects effect NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 intranasally intranasally ADV RB _ _ _ _ _ 13 administered administer VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 14 14 NUM CD NumType=Card _ _ _ _ 17 normal normal ADJ JJ Degree=Pos _ _ _ _ 18 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 19 subjects subject NOUN NNS Number=Plur _ _ _ _ 20 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 treated treat VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 two two NUM CD NumType=Card _ _ _ _ 24 doses dos NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 either either DET DT _ _ _ _ _ 27 budesonide budesonide NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 BUD Bud NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 or or CCONJ CC _ _ _ _ _ 32 fluticasone fluticasone PRON NN Number=Sing _ _ _ _ 33 propionate propionate ADJ JJ Degree=Pos _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 FP FP NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 2 2 NUM CD NumType=Card _ _ _ _ 39 weeks week NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 2950 # text = Before treatment, at regular intervals during the treatment, 1 week and finally 6 weeks after termination of treatment, the effects on glucocorticoid receptor (GR) and methallothionein (MTIIa) mRNA expression levels were examined in peripheral lymphocytes using a solution hybridization assay. 1 Before before ADP IN _ _ _ _ _ 2 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 at at ADP IN _ _ _ _ _ 5 regular regular ADJ JJ Degree=Pos _ _ _ _ 6 intervals interval NOUN NNS Number=Plur _ _ _ _ 7 during during ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 1 1 NUM CD NumType=Card _ _ _ _ 12 week week NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 finally finally ADV RB _ _ _ _ _ 15 6 6 NUM CD NumType=Card _ _ _ _ 16 weeks week NOUN NNS Number=Plur _ _ _ _ 17 after after ADP IN _ _ _ _ _ 18 termination termination NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 effects effect NOUN NNS Number=Plur _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 26 receptor receptor NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 GR GR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 methallothionein methallothionein NOUN NN Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 MTIIa MTIIa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ _ 37 levels level NOUN NNS Number=Plur _ _ _ _ 38 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 39 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 42 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 43 using use VERB VBG VerbForm=Ger _ _ _ _ 44 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 45 solution solution NOUN NN Number=Sing _ _ _ _ 46 hybridization hybridization NOUN NN Number=Sing _ _ _ _ 47 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 2951 # text = Serum cortisol, osteocalcin and urinary cortisol levels were also determined. 1 Serum Serum NOUN NN Number=Sing _ _ _ _ 2 cortisol cortisol NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 osteocalcin osteocalcin ADJ JJ Degree=Pos _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 urinary urinary ADJ JJ Degree=Pos _ _ _ _ 7 cortisol cortisol NOUN NN Number=Sing _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 also also ADV RB _ _ _ _ _ 11 determined determined ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 2952 # text = An insulin tolerance test (ITT) was performed at the end of the second week of treatment and at the end of the 6-week washout period with no statistically significant change in cortisol response. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 insulin insulin ADJ JJ Degree=Pos _ _ _ _ 3 tolerance tolerance NOUN NN Number=Sing _ _ _ _ 4 test test NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 ITT ITT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 performed perform VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 at at ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 end end NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 16 week week NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 treatment treatment NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 at at ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 end end NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 week week NOUN NN Number=Sing _ _ _ _ 28 washout washout ADP IN _ _ _ _ _ 29 period period NOUN NN Number=Sing _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 no no DET DT _ _ _ _ _ 32 statistically statistically ADV RB _ _ _ _ _ 33 significant significant ADJ JJ Degree=Pos _ _ _ _ 34 change change NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 cortisol cortisol ADJ JJ Degree=Pos _ _ _ _ 37 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 2953 # text = In peripheral lymphocytes, GR mRNA levels were significantly down-regulated. 1 In in ADP IN _ _ _ _ _ 2 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 3 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 GR Gr PROPN NNP Number=Sing _ _ _ _ 6 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 7 levels level NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 significantly significantly ADV RB _ _ _ _ _ 10 down down ADV RB _ _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 2954 # text = MTIIa mRNA levels increased significantly. 1 MTIIa MTIIa PROPN NNP Number=Sing _ _ _ _ 2 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 3 levels level NOUN NNS Number=Plur _ _ _ _ 4 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 significantly significantly ADV RB _ _ _ _ SpaceAfter=No 6 . . PUNCT . _ _ _ _ _ # sent_id = 2955 # text = Serum osteocalcin decreased significantly during treatment with both BUD and FP. 1 Serum Serum PROPN NNP Number=Sing _ _ _ _ 2 osteocalcin osteocalcin ADV RB _ _ _ _ _ 3 decreased decrease VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 significantly significantly ADV RB _ _ _ _ _ 5 during during ADP IN _ _ _ _ _ 6 treatment treatment NOUN NN Number=Sing _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 both both CCONJ CC _ _ _ _ _ 9 BUD Bud PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 FP FP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 2956 # text = Serum cortisol decreased after 1 week of treatment whereas urinary cortisol was not affected until the second week of treatment. 1 Serum Serum PROPN NNP Number=Sing _ _ _ _ 2 cortisol cortisol NOUN NN Number=Sing _ _ _ _ 3 decreased decrease VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 after after ADP IN _ _ _ _ _ 5 1 1 NUM CD NumType=Card _ _ _ _ 6 week week NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 treatment treatment NOUN NN Number=Sing _ _ _ _ 9 whereas wherea SCONJ IN _ _ _ _ _ 10 urinary urinary ADJ JJ Degree=Pos _ _ _ _ 11 cortisol cortisol NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 until until ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 18 week week NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2957 # text = In conclusion, intranasal glucocorticoids at clinically recommended doses have not only significant systemic effects on adrenal function, but also have an effect on specific gene expression in peripheral lymphocytes. 1 In in ADP IN _ _ _ _ _ 2 conclusion conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 intranasal intranasal ADJ JJ Degree=Pos _ _ _ _ 5 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 6 at at ADP IN _ _ _ _ _ 7 clinically clinically ADV RB _ _ _ _ _ 8 recommended recommend VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 doses dos NOUN NNS Number=Plur _ _ _ _ 10 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 not not ADV RB _ _ _ _ _ 12 only only ADV RB _ _ _ _ _ 13 significant significant ADJ JJ Degree=Pos _ _ _ _ 14 systemic systemic ADJ JJ Degree=Pos _ _ _ _ 15 effects effect NOUN NNS Number=Plur _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 adrenal adrenal ADJ JJ Degree=Pos _ _ _ _ 18 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 also also ADV RB _ _ _ _ _ 22 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 effect effect NOUN NN Number=Sing _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 specific specific ADJ JJ Degree=Pos _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 31 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 2958 # text = These effects are receptor-dependent, reversible, and according to serum and urinary cortisol levels and ITT, leave the hypothalamic-pituitary-adrenal function intact. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 reversible reversible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 according accord VERB VBG VerbForm=Ger _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 serum serum NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 urinary urinary ADJ JJ Degree=Pos _ _ _ _ 16 cortisol cortisol NOUN NN Number=Sing _ _ _ _ 17 levels level NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 ITT Itt NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 leave leave VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 hypothalamic hypothalamic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 pituitary pituitary NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 adrenal adrenal ADJ JJ Degree=Pos _ _ _ _ 28 function function NOUN NN Number=Sing _ _ _ _ 29 intact intact NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 2959 # text = Finally, these short-term systemic effects were not associated with any of the noticeable side-effects usually observed during long-term treatment with glucocorticoids. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 short short ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 term term NOUN NN Number=Sing _ _ _ _ 7 systemic systemic ADJ JJ Degree=Pos _ _ _ _ 8 effects effect NOUN NNS Number=Plur _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 any any DET DT _ _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 noticeable noticeable ADJ JJ Degree=Pos _ _ _ _ 17 side side NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 effects effect NOUN NNS Number=Plur _ _ _ _ 20 usually usually ADV RB _ _ _ _ _ 21 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 during during ADP IN _ _ _ _ _ 23 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 term term NOUN NN Number=Sing _ _ _ _ 26 treatment treatment NOUN NN Number=Sing _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2960 # text = Document 003003354 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003354 003003354 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2961 # text = Association of the interleukin-4 receptor alpha chain with p47phox, an activator of the phagocyte NADPH oxidase in B cells. 1 Association Association NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 4 4 NUM CD NumType=Card _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 alpha alpha NOUN NN Number=Sing _ _ _ _ 9 chain chain NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 p47phox p47phox NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 activator activator NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 phagocyte phagocyte ADJ JJ Degree=Pos _ _ _ _ 18 NADPH NADPh ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 19 oxidase oxidase NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 B b ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2962 # text = Interleukin (IL)-4 plays an important role in IgE synthesis in B cells and in Th2 differentiation in T cells. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 4 4 NUM CD NumType=Card _ _ _ _ 7 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 important important ADJ JJ Degree=Pos _ _ _ _ 10 role role NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 IgE Ige PROPN NNP Number=Sing _ _ _ _ 13 synthesis synthesis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 B b ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 Th2 Th2 NUM CD NumType=Card _ _ _ _ 20 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 2963 # text = IL-4 conducts its biological activities through binding to the IL-4 receptor (IL-4R) on the surface of target cells. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ _ 4 conducts conduct NOUN NNS Number=Plur _ _ _ _ 5 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 6 biological biological ADJ JJ Degree=Pos _ _ _ _ 7 activities activity NOUN NNS Number=Plur _ _ _ _ 8 through through SCONJ IN _ _ _ _ _ 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 4 4 NUM CD NumType=Card _ _ _ _ 15 receptor receptor NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 4R 4r PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 on on ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 surface surface NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 target target NOUN NN Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2964 # text = IL-4R are thought to be composed of the IL-4R alpha chain (IL-4R alpha) and either the IL-2R gamma chain or the IL-13R alpha chain. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 4R 4r NOUN NN Number=Sing _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 4R 4r PROPN NNP Number=Sing _ _ _ _ 14 alpha alpha NOUN NN Number=Sing _ _ _ _ 15 chain chain NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 4R 4r NOUN NN Number=Sing _ _ _ _ 20 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 either either CCONJ CC _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2R 2r NOUN NN Number=Sing _ _ _ _ 28 gamma gamma NOUN NN Number=Sing _ _ _ _ 29 chain chain NOUN NN Number=Sing _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 13R 13r PROPN NNP Number=Sing _ _ _ _ 35 alpha alpha NOUN NN Number=Sing _ _ _ _ 36 chain chain NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 2965 # text = We have previously shown that the membrane-proximal portion in the cytoplasmic domain of the human IL-4R alpha (hIL-4R alpha) is critical for proliferation, generation of germline epsilon transcript, and activation of STAT6, based on analyses of truncated hIL-4R alphas. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 membrane membrane NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 10 portion portion NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 14 domain domain NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 4R 4r PROPN NNP Number=Sing _ _ _ _ 21 alpha alpha NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 hIL hil NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 4R 4r NOUN NN Number=Sing _ _ _ _ 26 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 critical critical ADJ JJ Degree=Pos _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 generation generation NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 germline germline NOUN NN Number=Sing _ _ _ _ 36 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 37 transcript transcript NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 activation activation NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 STAT6 Stat6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 on on ADP IN _ _ _ _ _ 46 analyses analysis NOUN NNS Number=Plur _ _ _ _ 47 of of ADP IN _ _ _ _ _ 48 truncated truncated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 49 hIL hIL NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 4R 4R NOUN NN Number=Sing _ _ _ _ 52 alphas alpha NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 2966 # text = In this study, we found that p47phox, an activator of the phagocyte NADPH oxidase, binds to this portion by the two-hybrid system. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 p47phox p47phox NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 activator activator NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 phagocyte phagocyte ADJ JJ Degree=Pos _ _ _ _ 15 NADPH NADPH PROPN NNP Number=Sing _ _ _ _ 16 oxidase oxidase NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 binds bind NOUN NNS Number=Plur _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 21 portion portion NOUN NN Number=Sing _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 hybrid hybrid NOUN NN Number=Sing _ _ _ _ 27 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2967 # text = Furthermore, we observed the association of p47phox with the hIL-4R alpha in B cells derived from a normal donor. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 association association NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 p47phox p47phox NOUN NN Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 hIL hil NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 4R 4r NOUN NN Number=Sing _ _ _ _ 14 alpha alpha NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 B b ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 derived derive VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 normal normal ADJ JJ Degree=Pos _ _ _ _ 22 donor donor NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2968 # text = These results suggest that p47phox is involved in the signal transduction of IL-4 in B cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 p47phox p47phox NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 involved involved ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 signal signal NOUN NN Number=Sing _ _ _ _ 11 transduction transduction NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 4 4 NUM CD NumType=Card _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 B b ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 2969 # text = However, activation of STAT6, CD23 expression, and IgE synthesis induced by IL-4 were not affected in p47phox-deficient patients, which raises the possibility that p47phox may be important in other signaling activities as well in B cells. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 STAT6 STAT6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 CD23 CD23 NUM CD NumType=Card _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 IgE Ige ADJ JJ Degree=Pos _ _ _ _ 12 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 4 4 NUM CD NumType=Card _ _ _ _ 18 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 p47phox p47phox NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 25 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 which which PRON WDT PronType=Rel _ _ _ _ 28 raises raise VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 possibility possibility NOUN NN Number=Sing _ _ _ _ 31 that that SCONJ IN _ _ _ _ _ 32 p47phox p47phox NOUN NN Number=Sing _ _ _ _ 33 may may AUX MD VerbForm=Fin _ _ _ _ 34 be be AUX VB VerbForm=Inf _ _ _ _ 35 important important ADJ JJ Degree=Pos _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 other other ADJ JJ Degree=Pos _ _ _ _ 38 signaling signaling NOUN NN Number=Sing _ _ _ _ 39 activities activity NOUN NNS Number=Plur _ _ _ _ 40 as as ADV RB _ _ _ _ _ 41 well well ADV RB Degree=Pos _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 B b ADJ JJ Degree=Pos _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2970 # text = Document 003003355 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003355 003003355 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2971 # text = PU.1 (Spi-1) and C/EBP alpha regulate expression of the granulocyte-macrophage colony-stimulating factor receptor alpha gene. 1 PU.1 PU.1 PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 X LS _ _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 / / PUNCT , _ _ _ _ SpaceAfter=No 10 EBP EBP PROPN NNP Number=Sing _ _ _ _ 11 alpha alpha X FW Foreign=Yes _ _ _ _ 12 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 19 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 stimulating stimulate VERB VBG VerbForm=Ger _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 receptor receptor NOUN NN Number=Sing _ _ _ _ 24 alpha alpha ADP IN _ _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2972 # text = Growth factor receptors play an important role in hematopoiesis. 1 Growth growth ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 receptors receptor NOUN NNS Number=Plur _ _ _ _ 4 play play VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 important important ADJ JJ Degree=Pos _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 hematopoiesis hematopoiesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 2973 # text = In order to further understand the mechanisms directing the expression of these key regulators of hematopoiesis, we initiated a study investigating the transcription factors activating the expression of the granulocyte-macrophage colony-stimulating factor (GM-CSF) receptor alpha gene. 1 In in ADP IN _ _ _ _ _ 2 order order NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 further further ADV RB _ _ _ _ _ 5 understand understand VERB VB VerbForm=Inf _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 8 directing direct VERB VBG VerbForm=Ger _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 13 key key ADJ JJ Degree=Pos _ _ _ _ 14 regulators regulator NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 hematopoiesis hematopoiesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 19 initiated initiate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 study study NOUN NN Number=Sing _ _ _ _ 22 investigating investigate VERB VBG VerbForm=Ger _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 factors factor NOUN NNS Number=Plur _ _ _ _ 26 activating activate VERB VBG VerbForm=Ger _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 34 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 37 factor factor NOUN NN Number=Sing _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 receptor receptor NOUN NN Number=Sing _ _ _ _ 44 alpha alpha ADP IN _ _ _ _ _ 45 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 2974 # text = Here, we demonstrate that the human GM-CSF receptor alpha promoter directs reporter gene activity in a tissue-specific fashion in myelomonocytic cells, which correlates with its expression pattern as analyzed by reverse transcription PCR. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 CSF CSF PROPN NNP Number=Sing _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 alpha alpha ADP IN _ _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 directs direct NOUN NNS Number=Plur _ _ _ _ 15 reporter reporter NOUN NN Number=Sing _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 specific specific ADJ JJ Degree=Pos _ _ _ _ 23 fashion fashion NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 myelomonocytic myelomonocytic ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 which which PRON WDT PronType=Rel _ _ _ _ 29 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ _ 33 pattern pattern ADJ JJ Degree=Pos _ _ _ _ 34 as as SCONJ IN _ _ _ _ _ 35 analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 reverse reverse NOUN NN Number=Sing _ _ _ _ 38 transcription transcription NOUN NN Number=Sing _ _ _ _ 39 PCR Pcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 2975 # text = The GM-CSF receptor alpha promoter contains an important functional site between positions -53 and -41 as identified by deletion analysis of reporter constructs. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 CSF CSF PROPN NNP Number=Sing _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ _ 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 promoter promoter NOUN NN Number=Sing _ _ _ _ 8 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 important important ADJ JJ Degree=Pos _ _ _ _ 11 functional functional ADJ JJ Degree=Pos _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ _ 13 between between ADP IN _ _ _ _ _ 14 positions position NOUN NNS Number=Plur _ _ _ _ 15 -53 -53 NUM CD NumType=Card _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 - - SYM SYM _ _ _ _ SpaceAfter=No 18 41 41 NUM CD NumType=Card _ _ _ _ 19 as as ADV RB _ _ _ _ _ 20 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 deletion deletion NOUN NN Number=Sing _ _ _ _ 23 analysis analysis NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 reporter reporter NOUN NN Number=Sing _ _ _ _ 26 constructs constructs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2976 # text = We show that the myeloid and B cell transcription factor PU.1 binds specifically to this site. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 PU.1 PU.1 NUM CD NumType=Card _ _ _ _ 12 binds bind NOUN NNS Number=Plur _ _ _ _ 13 specifically specifically ADV RB _ _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 16 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 2977 # text = Furthermore, we demonstrate that a CCAAT site located upstream of the PU.1 site between positions -70 and -54 is involved in positive-negative regulation of the GM-CSF receptor alpha promoter activity. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 CCAAT Ccaat ADJ JJ Degree=Pos _ _ _ _ 8 site site NOUN NN Number=Sing _ _ _ _ 9 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 upstream upstream NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 PU.1 PU.1 PROPN NNP Number=Sing _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ _ 15 between between ADP IN _ _ _ _ _ 16 positions position NOUN NNS Number=Plur _ _ _ _ 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 70 70 NUM CD NumType=Card _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 - - SYM SYM _ _ _ _ SpaceAfter=No 21 54 54 NUM CD NumType=Card _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 involved involved ADJ JJ Degree=Pos _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 positive positive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 negative negative ADJ JJ Degree=Pos _ _ _ _ 28 regulation regulation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 CSF CSF PROPN NNP Number=Sing _ _ _ _ 34 receptor receptor NOUN NN Number=Sing _ _ _ _ 35 alpha alpha ADP IN _ _ _ _ _ 36 promoter promoter NOUN NN Number=Sing _ _ _ _ 37 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 2978 # text = C/EBP alpha is the major CCAAT/enhancer-binding protein (C/EBP) form binding to this site in nuclear extracts of U937 cells. 1 C/ C/ SYM NFP _ _ _ _ SpaceAfter=No 2 EBP EBP PROPN NNP Number=Sing _ _ _ _ 3 alpha alpha PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 major major ADJ JJ Degree=Pos _ _ _ _ 7 CCAAT Ccaat NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 C/ Cith NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 EBP EBP NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 form form NOUN NN Number=Sing _ _ _ _ 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 21 site site NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 24 extracts extract NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 U937 U937 NUM CD NumType=Card _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 2979 # text = Point mutations of either the PU.1 site or the C/EBP site that abolish the binding of the respective factors result in a significant decrease of GM-CSF receptor alpha promoter activity in myelomonocytic cells only. 1 Point point ADJ JJ Degree=Pos _ _ _ _ 2 mutations mutation NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 either either CCONJ CC _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 7 site site NOUN NN Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 C/ c/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 EBP EBP NOUN NN Number=Sing _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 abolish abolish VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 binding binding NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 respective respective ADJ JJ Degree=Pos _ _ _ _ 20 factors factor NOUN NNS Number=Plur _ _ _ _ 21 result result VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 significant significant ADJ JJ Degree=Pos _ _ _ _ 25 decrease decrease NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 CSF CSF PROPN NNP Number=Sing _ _ _ _ 30 receptor receptor NOUN NN Number=Sing _ _ _ _ 31 alpha alpha ADP IN _ _ _ _ _ 32 promoter promoter NOUN NN Number=Sing _ _ _ _ 33 activity activity NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 myelomonocytic myelomonocytic ADJ JJ Degree=Pos _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ _ 37 only only ADV RB _ _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 2980 # text = Furthermore, we demonstrate that in myeloid and B cell extracts, PU.1 forms a novel, specific, more slowly migrating complex (PU-SF) when binding the GM-CSF receptor alpha promoter PU.1 site. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 B b ADJ JJ Degree=Pos _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 PU.1 PU.1 NUM CD NumType=Card _ _ _ _ 14 forms form NOUN NNS Number=Plur _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 novel novel NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 more more ADV RBR _ _ _ _ _ 21 slowly slowly ADV RB _ _ _ _ _ 22 migrating migrating VERB VBG VerbForm=Ger _ _ _ _ 23 complex complex NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 PU PU PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 SF SF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 when when ADV WRB PronType=Int _ _ _ _ 30 binding bind VERB VBG VerbForm=Ger _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 CSF CSF PROPN NNP Number=Sing _ _ _ _ 35 receptor receptor NOUN NN Number=Sing _ _ _ _ 36 alpha alpha NOUN NN Number=Sing _ _ _ _ 37 promoter promoter NOUN NN Number=Sing _ _ _ _ 38 PU.1 Pu.1 NUM CD NumType=Card _ _ _ _ 39 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 2981 # text = This is the first demonstration of a specific interaction with PU.1 on a myeloid PU.1 binding site. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 5 demonstration demonstration NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 interaction interaction NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 PU.1 PU.1 NUM CD NumType=Card _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 15 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 2982 # text = The novel complex is distinct from that described previously as binding to B cell enhancer sites and can be formed by addition of PU.1 to extracts from certain nonmyeloid cell types which do not express PU.1, including T cells and epithelial cells, but not from erythroid cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 novel novel NOUN NN Number=Sing _ _ _ _ 3 complex complex NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 8 described describe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 previously previously ADV RB _ _ _ _ _ 10 as as SCONJ IN _ _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 B b PROPN NNP Number=Sing _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 16 sites site NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 can can AUX MD VerbForm=Fin _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 formed form VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 addition addition NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 PU.1 PU.1 NUM CD NumType=Card _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 extracts extract NOUN NNS Number=Plur _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 certain certain ADJ JJ Degree=Pos _ _ _ _ 29 nonmyeloid nonmyeloid ADJ JJ Degree=Pos _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 types type NOUN NNS Number=Plur _ _ _ _ 32 which which PRON WDT PronType=Rel _ _ _ _ 33 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 not not PART RB _ _ _ _ _ 35 express express VERB VB VerbForm=Inf _ _ _ _ 36 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 including include VERB VBG VerbForm=Ger _ _ _ _ 39 T t PROPN NNP Number=Sing _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 but but CCONJ CC _ _ _ _ _ 46 not not ADV RB _ _ _ _ _ 47 from from ADP IN _ _ _ _ _ 48 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 49 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 2983 # text = Furthermore, we demonstrate that the PU-SF complex binds to PU.1 sites found on a number of myeloid promoters, and its formation requires an intact PU.1 site adjacent to a single-stranded region. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 PU PU PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 SF SF PROPN NNP Number=Sing _ _ _ _ 10 complex complex ADJ JJ Degree=Pos _ _ _ _ 11 binds bind NOUN NNS Number=Plur _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 PU.1 PU.1 PROPN NNP Number=Sing _ _ _ _ 14 sites site NOUN NNS Number=Plur _ _ _ _ 15 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 number number NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 21 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 25 formation formation NOUN NN Number=Sing _ _ _ _ 26 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 intact intact ADJ JJ Degree=Pos _ _ _ _ 29 PU.1 PU.1 NOUN NN Number=Sing _ _ _ _ 30 site site NOUN NN Number=Sing _ _ _ _ 31 adjacent adjacent NOUN NN Number=Sing _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 single single ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 stranded strand VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 2984 # text = Expression of PU.1 in nonmyeloid cells can activate the GM-CSF receptor alpha promoter. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 PU.1 Pu.1 NUM CD NumType=Card _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 nonmyeloid nonmyeloid ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 can can AUX MD VerbForm=Fin _ _ _ _ 8 activate activate VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 CSF CSF PROPN NNP Number=Sing _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ _ 14 alpha alpha NOUN NN Number=Sing _ _ _ _ 15 promoter. promoter. NOUN NN Number=Sing _ _ _ _ # sent_id = 2985 # text = Deletion of the amino-terminal region of PU.1 results in a failure to form the PU-SF complex and in a concomitant loss of transactivation, suggesting that formation of the PU-SF complex is of functional importance for the activity of the GM-CSF receptor alpha promoter. 1 Deletion Deletion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 amino amino NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 terminal terminal NOUN NN Number=Sing _ _ _ _ 7 region region NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 PU.1 PU.1 NUM CD NumType=Card _ _ _ _ 10 results result NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 failure failure NOUN NN Number=Sing _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 form form VERB VB VerbForm=Inf _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 PU PU PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 SF SF PROPN NNP Number=Sing _ _ _ _ 20 complex complex NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 concomitant concomitant ADJ JJ Degree=Pos _ _ _ _ 25 loss loss NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 transactivation transactivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 30 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 31 formation formation NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 PU PU PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 SF SF PROPN NNP Number=Sing _ _ _ _ 37 complex complex NOUN NN Number=Sing _ _ _ _ 38 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 functional functional ADJ JJ Degree=Pos _ _ _ _ 41 importance importance NOUN NN Number=Sing _ _ _ _ 42 for for ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 activity activity NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 CSF CSF PROPN NNP Number=Sing _ _ _ _ 50 receptor receptor NOUN NN Number=Sing _ _ _ _ 51 alpha alpha ADP IN _ _ _ _ _ 52 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 2986 # text = Finally, we demonstrate that C/EBP alpha can also active the GM-CSF receptor alpha promoter in nonmyeloid cells. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 8 EBP EBP PROPN NNP Number=Sing _ _ _ _ 9 alpha alpha NOUN NN Number=Sing _ _ _ _ 10 can can AUX MD VerbForm=Fin _ _ _ _ 11 also also ADV RB _ _ _ _ _ 12 active active VERB VB VerbForm=Inf _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 CSF CSF PROPN NNP Number=Sing _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 alpha alpha NOUN NN Number=Sing _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 nonmyeloid nonmyeloid ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 2987 # text = (ABSTRACT TRUNCATED AT 400 WORDS) 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 ABSTRACT ABSTRACT X GW _ _ _ _ _ 3 TRUNCATED Truncate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 AT at ADV RB _ _ _ _ _ 5 400 400 NUM CD NumType=Card _ _ _ _ 6 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2988 # text = Document 003003358 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003358 003003358 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 2989 # text = The NF-kappa B inhibitor, tepoxalin, suppresses surface expression of the cell adhesion molecules CD62E, CD11b/CD18 and CD106. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 tepoxalin tepoxalin NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 suppresses suppress VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 surface surface NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 17 molecules molecule NOUN NNS Number=Plur _ _ _ _ 18 CD62E CD62E PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 CD11b/CD18 CD11b/CD18 PROPN NNP Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 106 106 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 2990 # text = Tepoxalin, a dual enzyme inhibitor of cyclooxygenase and 5-lipoxygenase has been shown to inhibit T-cell activation. 1 Tepoxalin Tepoxalin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 dual dual ADJ JJ Degree=Pos _ _ _ _ 5 enzyme enzyme NOUN NN Number=Sing _ _ _ _ 6 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 cyclooxygenase cyclooxygenase NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT : _ _ _ _ SpaceAfter=No 12 lipoxygenase lipoxygenase NOUN NN Number=Sing _ _ _ _ 13 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 15 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 18 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 2991 # text = Its immunosuppressive property is distinct from cyclosporin because only tepoxalin, but not cyclosporin, suppresses NF-kappa B activation. 1 Its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 2 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 3 property property NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 8 because because SCONJ IN _ _ _ _ _ 9 only only ADV RB _ _ _ _ _ 10 tepoxalin tepoxalin VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 not not ADV RB _ _ _ _ _ 14 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 suppresses suppress VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2992 # text = Here we report that tepoxalin selectively inhibits intercellular adhesion molecule-1 (ICAM-1, CD54)/MAC-1 (CD11b/CD18) dependent adhesion of polymorphonuclear cells to IL-1 activated human umbilical vein endothelial cells. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 tepoxalin tepoxalin NOUN NN Number=Sing _ _ _ _ 6 selectively selectively ADV RB _ _ _ _ _ 7 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 intercellular intercellular ADJ JJ Degree=Pos _ _ _ _ 9 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 10 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 CD54) CD54) NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 /MAC /mac NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 CD11b/CD18 CD11b/CD18 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 26 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 polymorphonuclear polymorphonuclear ADJ JJ Degree=Pos _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 human human ADJ JJ Degree=Pos _ _ _ _ 36 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 37 vein vein NOUN NN Number=Sing _ _ _ _ 38 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 2993 # text = The mechanism of inhibition is related to the surface expression of several cell adhesion molecules. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 related related ADJ JJ Degree=Pos _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 surface surface NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 several several ADJ JJ Degree=Pos _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 15 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2994 # text = Flow cytometry analyses on cultured cells that were treated with tepoxalin or antisense oligonucleotides to the P65/p50 subunit of NF-kappa B, and then stimulated with PMA, revealed a reduced expression of CD11b/CD18 on monocytic HL60 cells, and endothelial adhesion molecule-1 (CD62E) and vascular adhesion molecule-1 (CD106) on human umbilical vein endothelial cells. 1 Flow flow ADJ JJ Degree=Pos _ _ _ _ 2 cytometry cytometry NOUN NN Number=Sing _ _ _ _ 3 analyses analysis NOUN NNS Number=Plur _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 cultured culture ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 treated treat VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 tepoxalin tepoxalin NOUN NN Number=Sing _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 antisense antisense NOUN NN Number=Sing _ _ _ _ 14 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 P65 P65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 / / PUNCT , _ _ _ _ SpaceAfter=No 19 p50 p50 NUM CD NumType=Card _ _ _ _ 20 subunit subunit NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ 25 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 then then ADV RB PronType=Dem _ _ _ _ 29 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 CD11b/CD18 CD11b/CD18 NOUN NN Number=Sing _ _ _ _ 39 on on ADP IN _ _ _ _ _ 40 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 41 HL60 HL60 NUM CD NumType=Card _ _ _ _ 42 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 46 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 47 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 1 1 NUM CD NumType=Card _ _ _ _ 50 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 51 CD62E Cd62e NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 ) ) PUNCT -RRB- _ _ _ _ _ 53 and and CCONJ CC _ _ _ _ _ 54 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 55 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 56 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 1 1 NUM CD NumType=Card _ _ _ _ 59 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 60 CD106 CD106 NOUN NN Number=Sing _ _ _ SpaceAfter=No 61 ) ) PUNCT -RRB- _ _ _ _ _ 62 on on ADP IN _ _ _ _ _ 63 human human ADJ JJ Degree=Pos _ _ _ _ 64 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 65 vein vein NOUN NN Number=Sing _ _ _ _ 66 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 67 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 68 . . PUNCT . _ _ _ _ _ # sent_id = 2995 # text = Expression of other adhesion molecules such as lymphocyte function associated-antigen-1 (CD11a/CD18) and CD54 were unaffected. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 5 molecules molecule NOUN NNS Number=Plur _ _ _ _ 6 such such ADJ JJ Degree=Pos _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 lymphocyte lymphocyte ADJ JJ Degree=Pos _ _ _ _ 9 function function NOUN NN Number=Sing _ _ _ _ 10 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 antigen antigen NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 CD11a/CD18 CD11a/CD18 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 CD54 CD54 PROPN NNP Number=Sing _ _ _ _ 20 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 unaffected unaffected ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 2996 # text = Tepoxalin also inhibited the secretion of a NF-kappa B regulated chemokine, IL-8, a known inducer of CD11b/CD18 expression. 1 Tepoxalin Tepoxalin PROPN NNP Number=Sing _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 secretion secretion NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 chemokine chemokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 inducer inducer NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 CD11b/ Cd11b/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 18 18 NUM CD NumType=Card _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 2997 # text = Thus the suppression of CD11b/CD18 expression by tepoxalin may involve IL-8. 1 Thus thus ADV RB _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 suppression suppression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 CD11b/ CD11b/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 CD CD NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 18 18 NUM CD NumType=Card _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 tepoxalin tepoxalin NOUN NN Number=Sing _ _ _ _ 11 may may AUX MD VerbForm=Fin _ _ _ _ 12 involve involve VERB VB VerbForm=Inf _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 2998 # text = Our results suggest that by inhibiting NF-kappa B activation, surface expression of several adhesion molecules can be modulated and that tepoxalin may be useful in treating selected adhesion mediated events such as leukocyte migration or atherosclerotic plaque formation. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 by by SCONJ IN _ _ _ _ _ 6 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B b PROPN NNP Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 surface surface NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 several several ADJ JJ Degree=Pos _ _ _ _ 17 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 18 molecules molecule NOUN NNS Number=Plur _ _ _ _ 19 can can AUX MD VerbForm=Fin _ _ _ _ 20 be be AUX VB VerbForm=Inf _ _ _ _ 21 modulated modulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 tepoxalin tepoxalin NOUN NN Number=Sing _ _ _ _ 25 may may AUX MD VerbForm=Fin _ _ _ _ 26 be be AUX VB VerbForm=Inf _ _ _ _ 27 useful useful ADJ JJ Degree=Pos _ _ _ _ 28 in in SCONJ IN _ _ _ _ _ 29 treating treat VERB VBG VerbForm=Ger _ _ _ _ 30 selected select VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 32 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 events event NOUN NNS Number=Plur _ _ _ _ 34 such such ADJ JJ Degree=Pos _ _ _ _ 35 as as ADP IN _ _ _ _ _ 36 leukocyte leukocyte ADJ JJ Degree=Pos _ _ _ _ 37 migration migration NOUN NN Number=Sing _ _ _ _ 38 or or CCONJ CC _ _ _ _ _ 39 atherosclerotic atherosclerotic ADJ JJ Degree=Pos _ _ _ _ 40 plaque plaque NOUN NN Number=Sing _ _ _ _ 41 formation formation NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 2999 # text = Document 003003360 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003360 003003360 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3000 # text = Chronic human immunodeficiency virus type 1 infection of myeloid cells disrupts the autoregulatory control of the NF-kappaB/Rel pathway via enhanced IkappaBalpha degradation. 1 Chronic Chronic ADJ JJ Degree=Pos _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 4 virus virus NOUN NN Number=Sing _ _ _ _ 5 type type NOUN NN Number=Sing _ _ _ _ 6 1 1 NUM CD NumType=Card _ _ _ _ 7 infection infection NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 disrupts disrupt VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 autoregulatory autoregulatory ADJ JJ Degree=Pos _ _ _ _ 14 control control NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 21 Rel Rel PROPN NNP Number=Sing _ _ _ _ 22 pathway pathway NOUN NN Number=Sing _ _ _ _ 23 via via ADP IN _ _ _ _ _ 24 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 26 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3001 # text = Productive human immunodeficiency virus type 1 (HIV-1) infection causes sustained NF-kappaB DNA-binding activity in chronically infected monocytic cells. 1 Productive Productive ADJ JJ Degree=Pos _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 4 virus virus NOUN NN Number=Sing _ _ _ _ 5 type type NOUN NN Number=Sing _ _ _ _ 6 1 1 NUM CD NumType=Card _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 infection infection NOUN NN Number=Sing _ _ _ _ 13 causes cause NOUN NNS Number=Plur _ _ _ _ 14 sustained sustain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 18 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 binding bind VERB VBG VerbForm=Ger _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 chronically chronically ADV RB _ _ _ _ _ 24 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3002 # text = A direct temporal correlation exists between HIV infection and the appearance of NF-kappaB DNA-binding activity in myelomonoblastic PLB-985 cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 direct direct ADJ JJ Degree=Pos _ _ _ _ 3 temporal temporal ADJ JJ Degree=Pos _ _ _ _ 4 correlation correlation NOUN NN Number=Sing _ _ _ _ 5 exists exist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 between between ADP IN _ _ _ _ _ 7 HIV Hiv NOUN NN Number=Sing _ _ _ _ 8 infection infection NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 appearance appearance NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 myelomonoblastic myelomonoblastic ADJ JJ Degree=Pos _ _ _ _ 22 PLB PLB NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 985 985 NUM CD NumType=Card _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3003 # text = To examine the molecular basis of constitutive NF-kappaB DNA-binding activity in HIV1 -infected cells, we analyzed the phosphorylation and turnover of IkappaBalpha protein, the activity of the double-stranded RNA-dependent protein kinase (PKR) and the intracellular levels of NF-kappaB subunits in the PLB-985 and U937 myeloid cell models. 1 To to PART TO _ _ _ _ _ 2 examine examine VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 5 basis basis NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 11 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 binding binding VERB VBG VerbForm=Ger _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 HIV1 HIV1 PROPN NNP Number=Sing _ _ _ _ 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 22 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 turnover turnover NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 activity activity NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 stranded strand VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 RNA RNa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 41 protein protein NOUN NN Number=Sing _ _ _ _ 42 kinase kinase NOUN NN Number=Sing _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 PKR PKR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 49 levels level NOUN NNS Number=Plur _ _ _ _ 50 of of ADP IN _ _ _ _ _ 51 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 54 subunits subunit NOUN NNS Number=Plur _ _ _ _ 55 in in ADP IN _ _ _ _ _ 56 the the DET DT Definite=Def|PronType=Art _ _ _ _ 57 PLB PLB NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 -985 -985 NUM CD NumType=Card _ _ _ _ 59 and and CCONJ CC _ _ _ _ _ 60 U937 U937 NUM CD NumType=Card _ _ _ _ 61 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 62 cell cell NOUN NN Number=Sing _ _ _ _ 63 models model NOUN NNS Number=Plur _ _ _ SpaceAfter=No 64 . . PUNCT . _ _ _ _ _ # sent_id = 3004 # text = HIV-1 infection resulted in constitutive, low-level expression of type 1 interferon (IFN) at the mRNA level. 1 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 infection infection NOUN NN Number=Sing _ _ _ _ 5 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 constitutive constitutive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 low low ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 level level NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 type type NOUN NN Number=Sing _ _ _ _ 15 1 1 NUM CD NumType=Card _ _ _ _ 16 interferon interferon NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 at at ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 23 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3005 # text = Constitutive PKR activity was also detected in HIV-1-infected cells as a result of low-level IFN production, since the addition of anti-IFN-alpha/beta antibody to the cells decreased PKR expression. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 PKR Pkr NOUN NN Number=Sing _ _ _ _ 3 activity activity NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 result result NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 low low ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 level level NOUN NN Number=Sing _ _ _ _ 21 IFN Ifn NOUN NN Number=Sing _ _ _ _ 22 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 since since SCONJ IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 addition addition NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 anti-IFN- anti-IFN- NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 alpha/ alpha/ PUNCT HYPH _ _ _ _ SpaceAfter=No 30 beta beof NOUN NN Number=Sing _ _ _ _ 31 antibody antibody NOUN NN Number=Sing _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ _ 35 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 PKR Pkr ADP IN _ _ _ _ _ 37 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 3006 # text = Furthermore, the analysis of IkappaBalpha turnover demonstrated an increased degradation of IkappaBalpha in HIV-1-infected cells that may account for the constitutive DNA binding activity. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 7 turnover turnover ADV RB _ _ _ _ _ 8 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 degradation degradation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 -infected -infected ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 may may AUX MD VerbForm=Fin _ _ _ _ 22 account account VERB VB VerbForm=Inf _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 26 DNA dna NOUN NN Number=Sing _ _ _ _ 27 binding bind VERB VBG VerbForm=Ger _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3007 # text = A dramatic increase in the intracellular levels of NF-kappaB subunits c-Rel and NF-kappaB2 p100 and a moderate increase in NF-kappaB2 p52 and RelA(p65) were detected in HIV-1-infected cells, whereas NF-kappaB1 p105/p50 levels were not altered relative to the levels in uninfected cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 dramatic dramatic ADJ JJ Degree=Pos _ _ _ _ 3 increase increase NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 7 levels level NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 12 subunits subunit NOUN NNS Number=Plur _ _ _ _ 13 c class NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 Rel Rel NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB2 kappab2 NOUN NN Number=Sing _ _ _ _ 20 p100 p100 NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 moderate moderate ADJ JJ Degree=Pos _ _ _ _ 24 increase increase NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 kappaB2 kappab2 NUM CD NumType=Card _ _ _ _ 29 p52 p52 NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 RelA Rela NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT , _ _ _ _ SpaceAfter=No 40 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 -infected -infect ADJ JJ Degree=Pos _ _ _ _ 42 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 whereas whereas SCONJ IN _ _ _ _ _ 45 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 kappaB1 kappaB1 PROPN NNP Number=Sing _ _ _ _ 48 p105 p105 NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 / / PUNCT , _ _ _ _ SpaceAfter=No 50 p50 p50 NUM CD NumType=Card _ _ _ _ 51 levels level NOUN NNS Number=Plur _ _ _ _ 52 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 53 not not PART RB _ _ _ _ _ 54 altered alter VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 55 relative relative ADV RB _ _ _ _ _ 56 to to ADP IN _ _ _ _ _ 57 the the DET DT Definite=Def|PronType=Art _ _ _ _ 58 levels level NOUN NNS Number=Plur _ _ _ _ 59 in in ADP IN _ _ _ _ _ 60 uninfected uninfected ADJ JJ Degree=Pos _ _ _ _ 61 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 62 . . PUNCT . _ _ _ _ _ # sent_id = 3008 # text = We suggest that HIV-1 infection of myeloid cells induces IFN production and PKR activity, which in turn contribute to enhanced IkappaBalpha phosphorylation and subsequent degradation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 infection infection NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 induces induces NOUN NNS Number=Plur _ _ _ _ 12 IFN Ifn ADP IN _ _ _ _ _ 13 production production NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 PKR Pkr NOUN NN Number=Sing _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 turn turn NOUN NN Number=Sing _ _ _ _ 21 contribute contribute NOUN NN Number=Sing _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 enhanced enhance VERB VB VerbForm=Inf _ _ _ _ 24 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 25 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 28 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3009 # text = Nuclear translocation of NF-kappaB subunits may ultimately increase the intracellular pool of NF-kappaB/IkappaBalpha by an autoregulatory mechanism. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 translocation translocation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 subunits subunit NOUN NNS Number=Plur _ _ _ _ 8 may may AUX MD VerbForm=Fin _ _ _ _ 9 ultimately ultimately ADV RB _ _ _ _ _ 10 increase increase VERB VB VerbForm=Inf _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 13 pool pool NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 19 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 autoregulatory autoregulatory ADJ JJ Degree=Pos _ _ _ _ 23 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3010 # text = Enhanced turnover of IkappaBalpha and the accumulation of NF-kappaB/Rel proteins may contribute to the chronically activated state of HIV-1-infected cells. 1 Enhanced enhance ADJ JJ Degree=Pos _ _ _ _ 2 turnover turnover NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 13 Rel Rel PROPN NNP Number=Sing _ _ _ _ 14 proteins protein NOUN NNS Number=Plur _ _ _ _ 15 may may AUX MD VerbForm=Fin _ _ _ _ 16 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 chronically chronically ADV RB _ _ _ _ _ 20 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 state state NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3011 # text = Document 003003364 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003364 003003364 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3012 # text = The role of gamma/delta T cell receptor positive cells in pregnancy. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 gamma gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 delta delta PROPN NNP Number=Sing _ _ _ _ 7 T T PROPN NNP Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ _ 10 positive positive ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 pregnancy pregnancy NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3013 # text = PROBLEM: Due to the lack of classical HLA antigens on the trophoblast, fetal antigens are possibly presented in a non major histocompatibility complex (MHC) restricted way. 1 PROBLEM problem NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Due due ADP IN _ _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 lack lack NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 classical classical ADJ JJ Degree=Pos _ _ _ _ 9 HLA HLA NOUN NN Number=Sing _ _ _ _ 10 antigens antigen NOUN NNS Number=Plur _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 trophoblast trophoblast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 16 antigens antigen NOUN NNS Number=Plur _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 possibly possibly ADV RB _ _ _ _ _ 19 presented present VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 non non X AFX _ _ _ _ _ 23 major major ADJ JJ Degree=Pos _ _ _ _ 24 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 25 complex complex NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 MHC MHC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 restricted restrict VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 way way NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3014 # text = Decidual gammadelta 1 Decidual Decidual ADJ JJ Degree=Pos _ _ _ _ 2 gammadelta gammadelta NOUN NN Number=Sing _ _ _ _ # sent_id = 3015 # text = T cells, which significantly increase in number during pregnancy, might play a role in recognition of fetal antigens and also in determining the quality of the response to these antigens. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 significantly significantly ADV RB _ _ _ _ _ 6 increase increase VERB VB VerbForm=Inf _ _ _ _ 7 in in ADP RP _ _ _ _ _ 8 number number NOUN NN Number=Sing _ _ _ _ 9 during during ADP IN _ _ _ _ _ 10 pregnancy pregnancy NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 might might AUX MD VerbForm=Fin _ _ _ _ 13 play play VERB VB VerbForm=Inf _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 role role NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 recognition recognition NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 20 antigens antigen NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 also also ADV RB _ _ _ _ _ 23 in in SCONJ IN _ _ _ _ _ 24 determining determine VERB VBG VerbForm=Ger _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 quality quality NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 response response NOUN NN Number=Sing _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 32 antigens antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3016 # text = Our study was aimed at investigating the role of this cell population in progesterone-dependent immunomodulation. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 aimed aim VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 at at SCONJ IN _ _ _ _ _ 6 investigating investigate VERB VBG VerbForm=Ger _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 population population NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 progesterone progesterone ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 17 immunomodulation immunomodulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3017 # text = METHOD OF STUDY: 1 METHOD method NOUN NN Number=Sing _ _ _ _ 2 OF of ADP IN _ _ _ _ _ 3 STUDY study PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ # sent_id = 3018 # text = Peripheral lymphocytes from healthy pregnant women and from habitual aborters were tested by immunocytochemistry for the presence of gamma/delta T cell receptor (TCR) and progesterone receptor. 1 Peripheral Peripheral ADJ JJ Degree=Pos _ _ _ _ 2 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 5 pregnant pregnant ADJ JJ Degree=Pos _ _ _ _ 6 women woman NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 habitual habitual ADJ JJ Degree=Pos _ _ _ _ 10 aborters aborter NOUN NNS Number=Plur _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 tested test VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 immunocytochemistry immunocytochemistry NOUN NN Number=Sing _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 presence presence NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 gamma/ gamma/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 20 delta delof PROPN NNP Number=Sing _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 receptor receptor NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 TCR TCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 progesterone progesterone VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3019 # text = To investigate the effect of treatment with a pan anti gamma/delta antibody, lymphocytes were incubated for 3 hr with the antibody, and then interleukin (IL)-10, IL-12 and progesterone-induced blocking factor (PIBF) expression (by immuno-cytochemistry) as well as natural killer (NK) cell activity were determined. 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effect effect NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 treatment treatment NOUN NN Number=Sing _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 pan pan NOUN NN Number=Sing _ _ _ _ 10 anti anti X AFX _ _ _ _ _ 11 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 delta delta NOUN NN Number=Sing _ _ _ _ 14 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 17 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 incubated incubate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 3 3 NUM CD NumType=Card _ _ _ _ 21 hr hr NOUN NN Number=Sing _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 then then ADV RB PronType=Dem _ _ _ _ 28 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 - - SYM SYM _ _ _ _ SpaceAfter=No 33 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 IL IL ADV RB _ _ _ _ SpaceAfter=No 36 - - SYM SYM _ _ _ _ SpaceAfter=No 37 12 12 NUM CD NumType=Card _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 progesterone progesterone NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 blocking blocking NOUN NN Number=Sing _ _ _ _ 43 factor factor NOUN NN Number=Sing _ _ _ _ 44 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 45 PIBF PIBF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 ) ) PUNCT -RRB- _ _ _ _ _ 47 expression expression NOUN NN Number=Sing _ _ _ _ 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 by by ADP IN _ _ _ _ _ 50 immuno immuno ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 51 -cytochemistry -cytochemistry NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 ) ) PUNCT -RRB- _ _ _ _ _ 53 as as ADV RB _ _ _ _ _ 54 well well ADV RB Degree=Pos _ _ _ _ 55 as as ADP IN _ _ _ _ _ 56 natural natural ADJ JJ Degree=Pos _ _ _ _ 57 killer killer NOUN NN Number=Sing _ _ _ _ 58 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 59 NK NK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 60 ) ) PUNCT -RRB- _ _ _ _ _ 61 cell cell NOUN NN Number=Sing _ _ _ _ 62 activity activity NOUN NN Number=Sing _ _ _ _ 63 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 64 determined determine ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 65 . . PUNCT . _ _ _ _ _ # sent_id = 3020 # text = RESULTS: In peripheral blood of healthy pregnant women the percentage of gamma/delta TCR+ cells was significantly higher (P < 0.001) than in that of recurrent aborters or of non-pregnant individuals. 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 In in ADP IN _ _ _ _ _ 4 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 5 blood blood NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 8 pregnant pregnant ADJ JJ Degree=Pos _ _ _ _ 9 women woman NOUN NNS Number=Plur _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 percentage percentage NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 gamma/ gammaith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 14 delta delta PROPN NNP Number=Sing _ _ _ _ 15 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 + + SYM SYM _ _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 significantly significantly ADV RB _ _ _ _ _ 20 higher higher ADJ JJR Degree=Cmp _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 P P NOUN NN Number=Sing _ _ _ _ 23 < < PUNCT -LRB- _ _ _ _ _ 24 0.001 0.001 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 than than ADP IN _ _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 recurrent recurrent ADJ JJ Degree=Pos _ _ _ _ 31 aborters aborter NOUN NNS Number=Plur _ _ _ _ 32 or or CCONJ CC _ _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 non-pregnant non-pregnant ADJ JJ Degree=Pos _ _ _ _ 35 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 3021 # text = Ninety-seven percent of gamma/delta TCR+ pregnancy lymphocytes expressed progesterone receptor. 1 Ninety Ninety NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 seven seven NUM CD NumType=Card _ _ _ _ 4 percent percent NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 gamma/ gammaith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 7 delta delta PROPN NNP Number=Sing _ _ _ _ 8 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 + + SYM SYM _ _ _ _ _ 10 pregnancy pregnancy ADJ JJ Degree=Pos _ _ _ _ 11 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 progesterone progesterone ADJ JJ Degree=Pos _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3022 # text = Binding of a specific antibody to the gamma/delta TCR inhibited PIBF- as well as IL-10 production, whereas it increased NK activity and IL-12 expression. 1 Binding binding VERB VBG VerbForm=Ger _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 antibody antibody NOUN NN Number=Sing _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 gamma/ gammaith SYM NFP _ _ _ _ SpaceAfter=No 9 delta delta PROPN NNP Number=Sing _ _ _ _ 10 TCR TCR PROPN NNP Number=Sing _ _ _ _ 11 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 PIBF PIBF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ _ 14 as as ADV RB _ _ _ _ _ 15 well well ADV RB Degree=Pos _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 10 10 NUM CD NumType=Card _ _ _ _ 20 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 whereas whereas SCONJ IN _ _ _ _ _ 23 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 24 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 NK NK PROPN NNP Number=Sing _ _ _ _ 26 activity activity NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 12 12 NUM CD NumType=Card _ _ _ _ 31 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3023 # text = CONCLUSIONS: 1 CONCLUSIONS conclusion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 3024 # text = These data suggest the role of gamma/delta TCR-bearing lymphocytes in progesterone-dependent immunomodulation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 gamma/ gammaith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 8 delta delta PROPN NNP Number=Sing _ _ _ _ 9 TCR Tcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 bearing bearing NOUN NN Number=Sing _ _ _ _ 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 progesterone progesterone ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 17 immunomodulation immunomodulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3025 # text = Document 003003368 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003368 003003368 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3026 # text = The functional synergy between IL-12 and IL-2 involves p38 mitogen-activated protein kinase and is associated with the augmentation of STAT serine phosphorylation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 functional functional ADJ JJ Degree=Pos _ _ _ _ 3 synergy synergy NOUN NN Number=Sing _ _ _ _ 4 between between ADP IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 12 12 NUM CD NumType=Card _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 involves involf NOUN NNS Number=Plur _ _ _ _ 13 p38 p38 NUM CD NumType=Card _ _ _ _ 14 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 -activated -activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 kinase kinase NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 augmentation augmentation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 STAT Stat NOUN NN Number=Sing _ _ _ _ 26 serine serine NOUN NN Number=Sing _ _ _ _ 27 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3027 # text = IL-12 and IL-2 can stimulate mitogen- or CD3-activated T cells to proliferate, produce IFN-gamma, and kill tumor cells. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 12 12 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 10 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 proliferate proliferate VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 produce produce VERB VB VerbForm=Inf _ _ _ _ 22 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 kill kill VERB VB VerbForm=Inf _ _ _ _ 28 tumor tumor NOUN NN Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3028 # text = The magnitude of these functional responses is greatly augmented when T cells are activated by the combination of IL-12 and IL-2. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 magnitude magnitude NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 functional functional ADJ JJ Degree=Pos _ _ _ _ 6 responses response NOUN NNS Number=Plur _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 greatly greatly ADV RB _ _ _ _ _ 9 augmented augment VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 when when ADV WRB PronType=Int _ _ _ _ 11 T t NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 combination combination NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 12 12 NUM CD NumType=Card _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3029 # text = Although peripheral blood T cells are largely unresponsive to these cytokines without prior activation, a small subset of CD8+ T cells (CD8+CD18bright) is strongly activated by the combination of IL-12 and IL-2. 1 Although although SCONJ IN _ _ _ _ _ 2 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 3 blood blood NOUN NN Number=Sing _ _ _ _ 4 T t NOUN NN Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 largely largely ADV RB _ _ _ _ _ 8 unresponsive unresponsive ADJ JJ Degree=Pos _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 12 without without ADP IN _ _ _ _ _ 13 prior prior ADJ JJ Degree=Pos _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 small small ADJ JJ Degree=Pos _ _ _ _ 18 subset subset NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 CD8 CD8 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 + + SYM SYM _ _ _ _ _ 22 T t NUM CD NumType=Card _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 CD8+CD18bright CD8+CD18bright PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 strongly strongly ADV RB _ _ _ _ _ 29 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 combination combination NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 12 12 NUM CD NumType=Card _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 3030 # text = In this report we show that the functional synergy between IL-12 and IL-2 in CD8+CD18bright T cells correlates with the activation of the stress kinases, p38 mitogen-activated protein (MAP) kinase and stress-activated protein kinase (SAPK)/Jun N-terminal kinase, but not with the activation of the extracellular signal-regulated kinases. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 functional functional ADJ JJ Degree=Pos _ _ _ _ 9 synergy synergy NOUN NN Number=Sing _ _ _ _ 10 between between ADP IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 12 12 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 CD8+CD Cd8+cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 18bright 18bright AUX MD VerbForm=Fin _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 stress stress NOUN NN Number=Sing _ _ _ _ 30 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 p38 p38 NUM CD NumType=Card _ _ _ _ 33 mitogen mitogen NUM CD NumType=Card _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 protein protein NOUN NN Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 MAP map PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 kinase kinase NOUN NN Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 stress stress NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 protein protein NOUN NN Number=Sing _ _ _ _ 46 kinase kinase NOUN NN Number=Sing _ _ _ _ 47 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 48 SAPK SAPK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 50 / / PUNCT , _ _ _ _ SpaceAfter=No 51 Jun Jun PROPN NNP Number=Sing _ _ _ _ 52 N- N- SYM NFP _ _ _ _ SpaceAfter=No 53 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 54 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 , , PUNCT , _ _ _ _ _ 56 but but CCONJ CC _ _ _ _ _ 57 not not ADV RB _ _ _ _ _ 58 with with ADP IN _ _ _ _ _ 59 the the DET DT Definite=Def|PronType=Art _ _ _ _ 60 activation activation NOUN NN Number=Sing _ _ _ _ 61 of of ADP IN _ _ _ _ _ 62 the the DET DT Definite=Def|PronType=Art _ _ _ _ 63 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 64 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 65 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 66 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 67 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 68 . . PUNCT . _ _ _ _ _ # sent_id = 3031 # text = The functional synergy between IL-2 and IL-12 is also associated with a prominent increase in STAT1 and STAT3 serine phosphorylation over that observed with IL-12 or IL-2 alone. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 functional functional ADJ JJ Degree=Pos _ _ _ _ 3 synergy synergy NOUN NN Number=Sing _ _ _ _ 4 between between ADP IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 12 12 NUM CD NumType=Card _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 also also ADV RB _ _ _ _ _ 14 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 prominent prominent ADJ JJ Degree=Pos _ _ _ _ 18 increase increase NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 STAT1 STAT1 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 STAT3 STAT3 NUM CD NumType=Card _ _ _ _ 23 serine serine NOUN NN Number=Sing _ _ _ _ 24 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 25 over over ADP IN _ _ _ _ _ 26 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 27 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 12 12 NUM CD NumType=Card _ _ _ _ 32 or or CCONJ CC _ _ _ _ _ 33 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 2 2 NUM CD NumType=Card _ _ _ _ 36 alone alone ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3032 # text = By contrast, STAT tyrosine phosphorylation is not augmented over that seen with either cytokine alone. 1 By by ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 STAT Stat NOUN NN Number=Sing _ _ _ _ 5 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 6 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 augmented augment VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 over over ADP IN _ _ _ _ _ 11 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 12 seen see NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 either either DET DT _ _ _ _ _ 15 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 16 alone alone ADV RB _ _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3033 # text = A specific inhibitor of p38 MAP kinase completely inhibits the serine phosphorylation of STAT1 and STAT3 induced by IL-12 and IL-2 and abrogates the functional synergy between IL-12 and IL-2 without affecting 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 specific specific ADJ JJ Degree=Pos _ _ _ _ 3 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 p38 p38 NUM CD NumType=Card _ _ _ _ 6 MAP map NOUN NN Number=Sing _ _ _ _ 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 completely completely ADV RB _ _ _ _ _ 9 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 serine serine NOUN NN Number=Sing _ _ _ _ 12 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 STAT1 STAT1 NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 STAT3 STAT3 NOUN NN Number=Sing _ _ _ _ 17 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 12 12 NUM CD NumType=Card _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 abrogates abrogate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 functional functional ADJ JJ Degree=Pos _ _ _ _ 30 synergy synergy NOUN NN Number=Sing _ _ _ _ 31 between between ADP IN _ _ _ _ _ 32 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 12 12 NUM CD NumType=Card _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 2 2 NUM CD NumType=Card _ _ _ _ 39 without without SCONJ IN _ _ _ _ _ 40 affecting affect VERB VBG VerbForm=Ger _ _ _ _ # sent_id = 3034 # text = STAT tyrosine phosphorylation. 1 STAT Stat VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 tyrosine tyrosine PRON PRP _ _ _ _ _ 3 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ _ # sent_id = 3035 # text = This suggests that p38 MAP kinase may play an important role in regulating 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 p38 p38 NUM CD NumType=Card _ _ _ _ 5 MAP map NOUN NN Number=Sing _ _ _ _ 6 kinase kinase NOUN NN Number=Sing _ _ _ _ 7 may may AUX MD VerbForm=Fin _ _ _ _ 8 play play VERB VB VerbForm=Inf _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 important important ADJ JJ Degree=Pos _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 in in SCONJ IN _ _ _ _ _ 13 regulating regulat VERB VBG VerbForm=Ger _ _ _ _ # sent_id = 3036 # text = STAT serine phosphorylation in response to the combination of IL-12 and IL-2. Furthermore, these findings indicate that the optimal activation of T cells by IL-12 and IL-2 may depend on an interaction between the p38 MAP kinase and Janus kinase/STAT signaling pathways. 1 STAT Stat VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 serine serine PRON PRP _ _ _ _ _ 3 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 response response NOUN NN Number=Sing _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 combination combination NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 12 12 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ 18 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 21 findings finding NOUN NNS Number=Plur _ _ _ _ 22 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 12 12 NUM CD NumType=Card _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 2 2 NUM CD NumType=Card _ _ _ _ 38 may may AUX MD VerbForm=Fin _ _ _ _ 39 depend depend VERB VB VerbForm=Inf _ _ _ _ 40 on on ADP IN _ _ _ _ _ 41 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 interaction interaction NOUN NN Number=Sing _ _ _ _ 43 between between ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 p38 p38 NUM CD NumType=Card _ _ _ _ 46 MAP map NOUN NN Number=Sing _ _ _ _ 47 kinase kinase NOUN NN Number=Sing _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 Janus Janus PROPN NNP Number=Sing _ _ _ _ 50 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 /STAT /stat SCONJ IN _ _ _ _ _ 52 signaling signale VERB VBG VerbForm=Ger _ _ _ _ 53 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3037 # text = Document 003003369 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003369 003003369 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3038 # text = Interleukin-6 production in hemorrhagic shock is accompanied by neutrophil recruitment and lung injury. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 6 6 NUM CD NumType=Card _ _ _ _ 4 production production NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 hemorrhagic hemorrhagic ADJ JJ Degree=Pos _ _ _ _ 7 shock shock NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 12 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 lung lung NOUN NN Number=Sing _ _ _ _ 15 injury injury NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3039 # text = Hemorrhagic shock (HS) initiates an inflammatory cascade that includes the production of cytokines and recruitment of neutrophils (PMN) and may progress to organ failure, inducing acute respiratory distress syndrome (ARDS). 1 Hemorrhagic Hemorrhagic ADJ JJ Degree=Pos _ _ _ _ 2 shock shock NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 HS HS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 initiates initiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 9 cascade cascade NOUN NN Number=Sing _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 includes include VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 production production NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 PMN PMN NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 may may AUX MD VerbForm=Fin _ _ _ _ 25 progress progress VERB VB VerbForm=Inf _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 organ organ VERB VB VerbForm=Inf _ _ _ _ 28 failure failure NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 31 acute acute ADJ JJ Degree=Pos _ _ _ _ 32 respiratory respiratory NOUN NN Number=Sing _ _ _ _ 33 distress distress NOUN NN Number=Sing _ _ _ _ 34 syndrome syndrome NOUN NN Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 ARDS ARDS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 3040 # text = To examine the hypothesis that interleukin-6 (IL-6) contributes to PMN infiltration and lung damage in HS, we examined the lungs of rats subjected to unresuscitated and resuscitated HS for the production of IL-6 and activation of Stat3. 1 To to PART TO _ _ _ _ _ 2 examine examine VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 interleukin interleukin VERB VBG Tense=Pres|VerbForm=Part _ _ _ SpaceAfter=No 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 6 6 NUM CD NumType=Card _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 contributes contribute VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 PMN Pmn VERB VB VerbForm=Inf _ _ _ _ 17 infiltration infiltration NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 lung lung NOUN NN Number=Sing _ _ _ _ 20 damage damage NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 HS HS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 25 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 lungs lung NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 rats rat NOUN NNS Number=Plur _ _ _ _ 30 subjected subject VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 unresuscitated unresuscitated VERB VB VerbForm=Inf _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 resuscitated resuscitate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 HS H NOUN NNS Number=Plur _ _ _ _ 36 for for ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 production production NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 6 6 NUM CD NumType=Card _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 activation activation NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 Stat3 Stat3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 3041 # text = Using semiquantitative RT-PCR, we found a striking increase in IL-6 mRNA levels only in resuscitated HS, with peak levels observed 1 h after initiation of resuscitation. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 semiquantitative semiquantitative ADJ JJ Degree=Pos _ _ _ _ 3 RT Rt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 PCR PCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 8 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 striking strik VERB VBG VerbForm=Ger _ _ _ _ 11 increase increase NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 6 6 NUM CD NumType=Card _ _ _ _ 16 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 17 levels level NOUN NNS Number=Plur _ _ _ _ 18 only only ADV RB _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 resuscitated resuscitated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 HS HS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 peak peak NOUN NN Number=Sing _ _ _ _ 25 levels level NOUN NNS Number=Plur _ _ _ _ 26 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 1 1 NUM CD NumType=Card _ _ _ _ 28 h h NOUN NN Number=Sing _ _ _ _ 29 after after ADP IN _ _ _ _ _ 30 initiation initiation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 resuscitation resuscitation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3042 # text = Increased IL-6 protein expression was localized to bronchial and alveolar cells. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 6 6 NUM CD NumType=Card _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 localized localize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 bronchial bronchial ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 alveolar alveolar ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 3043 # text = Electrophoretic mobility shift assay of protein extracts from shock lungs exhibited an increase in Stat3 activation with kinetics similar to IL-6 mRNA. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assay assay NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 extracts extract NOUN NNS Number=Plur _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 shock shock NOUN NN Number=Sing _ _ _ _ 10 lungs lung NOUN NNS Number=Plur _ _ _ _ 11 exhibited exhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 increase increase NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 Stat3 Stat3 NUM CD NumType=Card _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 19 similar similar ADJ JJ Degree=Pos _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 6 6 NUM CD NumType=Card _ _ _ _ 24 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3044 # text = In situ DNA binding assay determined Stat3 activation predominantly within alveoli. 1 In in ADP IN _ _ _ _ _ 2 situ situ NOUN NN Number=Sing _ _ _ _ 3 DNA dna NOUN NN Number=Sing _ _ _ _ 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 assay assay ADV RB _ _ _ _ _ 6 determined determined ADJ JJ Degree=Pos _ _ _ _ 7 Stat3 Stat3 NOUN NN Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 predominantly predominantly ADV RB _ _ _ _ _ 10 within within ADP IN _ _ _ _ _ 11 alveoli alveoli NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 3045 # text = Intratracheal instillation of IL-6 alone into normal rats resulted in PMN infiltration into lung interstitium and alveoli, marked elevation of bronchoalveolar lavage cellularity, and increased wet-to-dry ratio. 1 Intratracheal Intratracheal ADJ JJ Degree=Pos _ _ _ _ 2 instillation instillation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 6 6 NUM CD NumType=Card _ _ _ _ 7 alone alone ADV RB _ _ _ _ _ 8 into into ADP IN _ _ _ _ _ 9 normal normal ADJ JJ Degree=Pos _ _ _ _ 10 rats rat NOUN NNS Number=Plur _ _ _ _ 11 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 PMN Pmn PROPN NNP Number=Sing _ _ _ _ 14 infiltration infiltration NOUN NN Number=Sing _ _ _ _ 15 into into ADP IN _ _ _ _ _ 16 lung lung NOUN NN Number=Sing _ _ _ _ 17 interstitium interstitium NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 alveoli alveoli NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 elevation elevation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 bronchoalveolar bronchoalveolar ADJ JJ Degree=Pos _ _ _ _ 25 lavage lavage NOUN NN Number=Sing _ _ _ _ 26 cellularity cellularity NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 wet wet ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 to to ADP IN _ _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 dry dry ADJ JJ Degree=Pos _ _ _ _ 35 ratio ratio NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 3046 # text = These findings indicate that IL-6 production and Stat3 activation occur early in HS and may contribute to PMN-mediated lung injury, including ARDS after HS. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 6 6 NUM CD NumType=Card _ _ _ _ 8 production production NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 Stat3 Stat3 NUM CD NumType=Card _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 occur occur NOUN NN Number=Sing _ _ _ _ 13 early early ADV RB Degree=Pos _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 HS HS PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 may may AUX MD VerbForm=Fin _ _ _ _ 18 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 PMN Pmn VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 lung lung NOUN NN Number=Sing _ _ _ _ 24 injury injury NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 including include VERB VBG VerbForm=Ger _ _ _ _ 27 ARDS ARDS PROPN NNP Number=Sing _ _ _ _ 28 after after ADP IN _ _ _ _ _ 29 HS HS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3047 # text = Document 003003371 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003371 003003371 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3048 # text = A novel B cell-derived coactivator potentiates the activation of immunoglobulin promoters by octamer-binding transcription factors. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 novel novel NOUN NN Number=Sing _ _ _ _ 3 B b NOUN NN Number=Sing _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 8 potentiates potentiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 13 promoters promoter NOUN NNS Number=Plur _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3049 # text = A novel B cell-restricted activity, required for high levels of octamer/Oct-dependent transcription from an immunoglobulin heavy chain (IgH) promoter, was detected in an in vitro system consisting of HeLa cell-derived extracts complemented with fractionated B cell nuclear proteins. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 novel novel NOUN NN Number=Sing _ _ _ _ 3 B b NOUN NN Number=Sing _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 high high ADJ JJ Degree=Pos _ _ _ _ 12 levels level NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 23 heavy heavy ADJ JJ Degree=Pos _ _ _ _ 24 chain chain NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 IgH IgH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 31 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 vitro vitro NOUN NN Number=Sing _ _ _ _ 36 system system NOUN NN Number=Sing _ _ _ _ 37 consisting consiste VERB VBG VerbForm=Ger _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 40 cell cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 extracts extract NOUN NNS Number=Plur _ _ _ _ 44 complemented complement VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 with with ADP IN _ _ _ _ _ 46 fractionated fractionate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 B b NOUN NN Number=Sing _ _ _ _ 48 cell cell NOUN NN Number=Sing _ _ _ _ 49 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 50 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 3050 # text = The factor responsible for this activity was designated Oct coactivator from B cells (OCA-B). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 designated designate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 Oct Oct PROPN NNP Number=Sing _ _ _ _ 10 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 B b ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 OCA Oca NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3051 # text = OCA-B stimulates the transcription from an IgH promoter in conjunction with either Oct-1 or Oct-2 but shows no significant effect on the octamer/Oct-dependent transcription of the ubiquitously expressed histone H2B promoter and the transcription of USF- and Sp1-regulated promoters. 1 OCA Oca INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 B B PROPN NNP Number=Sing _ _ _ _ 4 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 IgH Igh PROPN NNP Number=Sing _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 conjunction conjunction NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 either either CCONJ CC _ _ _ _ _ 15 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 shows show VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 no no DET DT _ _ _ _ _ 25 significant significant ADJ JJ Degree=Pos _ _ _ _ 26 effect effect NOUN NN Number=Sing _ _ _ _ 27 on on ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 / / PUNCT , _ _ _ _ SpaceAfter=No 31 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 ubiquitously ubiquitously ADV RB _ _ _ _ _ 38 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 histone histone NOUN NN Number=Sing _ _ _ _ 40 H2B H2b NOUN NN Number=Sing _ _ _ _ 41 promoter promoter NOUN NN Number=Sing _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 transcription transcription NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 USF USF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT , _ _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 Sp1 sp1 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 -regulated -regulate ADJ JJ Degree=Pos _ _ _ _ 51 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 3052 # text = Taken together, our results suggest that OCA-B is a tissue-, promoter-, and factor-specific coactivator and that OCA-B may be a major determinant for B cell-specific activation of immunoglobulin promoters. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 OCA OCa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 B b PROPN NNP Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 factor factor ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 22 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 OCA OCa NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 B b NOUN NN Number=Sing _ _ _ _ 28 may may AUX MD VerbForm=Fin _ _ _ _ 29 be be AUX VB VerbForm=Inf _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 major major ADJ JJ Degree=Pos _ _ _ _ 32 determinant determinant NOUN NN Number=Sing _ _ _ _ 33 for for ADP IN _ _ _ _ _ 34 B b ADJ JJ Degree=Pos _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 37 activation activation NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 40 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 3053 # text = In light of the evidence showing physical and functional interactions between Oct factors and OCA-B, we propose a mechanism of action for OCA-B and discuss the implications of OCA-B for the transcriptional regulation of other tissue-specific promoters. 1 In in ADP IN _ _ _ _ _ 2 light light NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 evidence evidence NOUN NN Number=Sing _ _ _ _ 6 showing show VERB VBG VerbForm=Ger _ _ _ _ 7 physical physical ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 functional functional ADJ JJ Degree=Pos _ _ _ _ 10 interactions interaction NOUN NNS Number=Plur _ _ _ _ 11 between between ADP IN _ _ _ _ _ 12 Oct Oct PROPN NNP Number=Sing _ _ _ _ 13 factors factor NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 OCA OCa NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 20 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 action action NOUN NN Number=Sing _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 OCA OCA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 B B PROPN NNP Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 discuss discuss VERB VB VerbForm=Inf _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 implications implication NOUN NNS Number=Plur _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 OCA OCa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 B b PROPN NNP Number=Sing _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 40 regulation regulation NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 other other ADJ JJ Degree=Pos _ _ _ _ 43 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 specific specific ADJ JJ Degree=Pos _ _ _ _ 46 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3054 # text = Document 003003373 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003373 003003373 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3055 # text = Heterogeneity of antigen molecules recognized by anti-tax1 monoclonal antibody Lt-4 in cell lines bearing human T cell leukemia virus type I and related retroviruses. 1 Heterogeneity Heterogeneity NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 4 molecules molecule NOUN NNS Number=Plur _ _ _ _ 5 recognized recognize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 anti-tax1 anti-tax1 NUM CD NumType=Card _ _ _ _ 8 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 9 antibody antibody ADJ JJ Degree=Pos _ _ _ _ 10 Lt Lt NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 4 4 NUM CD NumType=Card _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 lines line NOUN NNS Number=Plur _ _ _ _ 16 bearing bear VERB VBG VerbForm=Ger _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 21 virus virus NOUN NN Number=Sing _ _ _ _ 22 type type NOUN NN Number=Sing _ _ _ _ 23 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 related relate ADJ JJ Degree=Pos _ _ _ _ 26 retroviruses retroviruse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3056 # text = Using a monoclonal antibody, Lt-4, directed against human T cell leukemia virus type I (HTLV-I) trans-activator (tax1) antigen, we examined the expression of tax1 and related antigens in a variety of T cell lines bearing HTLV-I and related retroviruses, simian T cell leukemia virus type I (STLV-I) and HTLV-II, by immunofluorescence and immunoblot assays. Lt-4 reacted with all HTLV-I-bearing cell lines tested and five out of eight simian cell lines bearing STLV-I, but not with an HTLV-II-bearing cell line. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 4 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 Lt Lt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 against against ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ _ 17 type type NOUN NN Number=Sing _ _ _ _ 18 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 activator activator NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 tax1 tax1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 antigen antigen NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 33 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 tax1 tax1 NUM CD NumType=Card _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 related related ADJ JJ Degree=Pos _ _ _ _ 40 antigens antigen NOUN NNS Number=Plur _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 variety variety NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 T t PROPN NNP Number=Sing _ _ _ _ 46 cell cell NOUN NN Number=Sing _ _ _ _ 47 lines line NOUN NNS Number=Plur _ _ _ _ 48 bearing bear VERB VBG VerbForm=Ger _ _ _ _ 49 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 52 and and CCONJ CC _ _ _ _ _ 53 related related ADJ JJ Degree=Pos _ _ _ _ 54 retroviruses retroviruse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 55 , , PUNCT , _ _ _ _ _ 56 simian simian ADJ JJ Degree=Pos _ _ _ _ 57 T t PROPN NNP Number=Sing _ _ _ _ 58 cell cell NOUN NN Number=Sing _ _ _ _ 59 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 60 virus virus NOUN NN Number=Sing _ _ _ _ 61 type type NOUN NN Number=Sing _ _ _ _ 62 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 63 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 64 STLV STLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 65 - - PUNCT , _ _ _ _ SpaceAfter=No 66 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 67 ) ) PUNCT -RRB- _ _ _ _ _ 68 and and CCONJ CC _ _ _ _ _ 69 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 70 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 71 II II PROPN NNP Number=Sing _ _ _ SpaceAfter=No 72 , , PUNCT , _ _ _ _ _ 73 by by ADP IN _ _ _ _ _ 74 immunofluorescence immunofluorescence NOUN NN Number=Sing _ _ _ _ 75 and and CCONJ CC _ _ _ _ _ 76 immunoblot immunoblot ADV RB _ _ _ _ _ 77 assays. assays. ADP IN _ _ _ _ _ 78 Lt Lt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 79 - - PUNCT , _ _ _ _ SpaceAfter=No 80 4 4 NUM CD NumType=Card _ _ _ _ 81 reacted react VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 82 with with ADP IN _ _ _ _ _ 83 all all DET DT _ _ _ _ _ 84 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 85 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 86 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 87 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 88 bearing bear VERB VBG VerbForm=Ger _ _ _ _ 89 cell cell NOUN NN Number=Sing _ _ _ _ 90 lines line NOUN NNS Number=Plur _ _ _ _ 91 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 92 and and CCONJ CC _ _ _ _ _ 93 five five NUM CD NumType=Card _ _ _ _ 94 out out ADP IN _ _ _ _ _ 95 of of ADP IN _ _ _ _ _ 96 eight eight NUM CD NumType=Card _ _ _ _ 97 simian simian ADJ JJ Degree=Pos _ _ _ _ 98 cell cell NOUN NN Number=Sing _ _ _ _ 99 lines line NOUN NNS Number=Plur _ _ _ _ 100 bearing bear VERB VBG VerbForm=Ger _ _ _ _ 101 STLV STLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 102 - - PUNCT , _ _ _ _ SpaceAfter=No 103 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 104 , , PUNCT , _ _ _ _ _ 105 but but CCONJ CC _ _ _ _ _ 106 not not ADV RB _ _ _ _ _ 107 with with ADP IN _ _ _ _ _ 108 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 109 HTLV HTLV NOUN NN Number=Sing _ _ _ SpaceAfter=No 110 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 111 II II NUM CD NumType=Card _ _ _ SpaceAfter=No 112 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 113 bearing bear VERB VBG VerbForm=Ger _ _ _ _ 114 cell cell NOUN NN Number=Sing _ _ _ _ 115 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 116 . . PUNCT . _ _ _ _ _ # sent_id = 3057 # text = Lt-4 detected 40 kd tax1 antigen molecules in most HTLV-I-bearing cell lines except one cell line that expressed 39 kd tax1 antigen. 1 Lt Lt VERB VB Mood=Imp|VerbForm=Fin _ _ _ SpaceAfter=No 2 - - SYM SYM _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ _ 4 detected detect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 40 40 NUM CD NumType=Card _ _ _ _ 6 kd kd NOUN NN Number=Sing _ _ _ _ 7 tax1 tax1 NUM CD NumType=Card _ _ _ _ 8 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 9 molecules molecule NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 most most ADJ JJS Degree=Sup _ _ _ _ 12 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 bearing bear VERB VBG VerbForm=Ger _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 lines line NOUN NNS Number=Plur _ _ _ _ 19 except except ADP IN _ _ _ _ _ 20 one one NUM CD NumType=Card _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 line line NOUN NN Number=Sing _ _ _ _ 23 that that PRON WDT PronType=Rel _ _ _ _ 24 expressed express VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 39 39 NUM CD NumType=Card _ _ _ _ 26 kd kd NOUN NN Number=Sing _ _ _ _ 27 tax1 tax1 NUM CD NumType=Card _ _ _ _ 28 antigen antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3058 # text = In the STLV-I-bearing T cell lines, tax1-related antigen molecules detected by Lt-4 were heterogeneous, having molecular weights in the range of 36-41 kd. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 STLV Stlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 6 -bearing -bear VERB VBG VerbForm=Ger _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 tax1 tax1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 related related ADJ JJ Degree=Pos _ _ _ _ 14 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 15 molecules molecule NOUN NNS Number=Plur _ _ _ _ 16 detected detect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 Lt Lt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 4 4 NUM CD NumType=Card _ _ _ _ 21 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 heterogeneous heterogeneous ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 having have VERB VBG VerbForm=Ger _ _ _ _ 25 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 26 weights weight NOUN NNS Number=Plur _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 range range NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 36 36 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 - - SYM SYM _ _ _ _ SpaceAfter=No 33 41 41 NUM CD NumType=Card _ _ _ _ 34 kd k NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3059 # text = Document 003003375 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003375 003003375 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3060 # text = Cutting edge: TCR stimulation by antibody and bacterial superantigen induces Stat3 activation in human T cells. 1 Cutting cut NOUN NN Number=Sing _ _ _ _ 2 edge edge NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 : : PUNCT : _ _ _ _ _ 4 TCR Tcr ADJ JJ Degree=Pos _ _ _ _ 5 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 antibody antibody ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 10 superantigen superantigen NUM CD NumType=Card _ _ _ _ 11 induces induce NOUN NNS Number=Plur _ _ _ _ 12 Stat3 Stat3 NUM CD NumType=Card _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3061 # text = Recent data show that TCR/CD3 stimulation induces activation of Stat5 in murine T cells. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 TCR/ TCR/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 6 CD3 CD3 NUM CD NumType=Card _ _ _ _ 7 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 8 induces induce NOUN NNS Number=Plur _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 Stat5 stat5 PROPN NNP Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 murine murine PROPN NNP Number=Sing _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 3062 # text = Here, we show that CD3 ligation by mAb and Staphylococcal enterotoxin (SE) induce a rapid, gradually accumulating, long-lasting tyrosine, and serine phosphorylation of Stat3 (but not Stat5) in allogen-specific human CD4+ T cell lines. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 CD3 CD3 NUM CD NumType=Card _ _ _ _ 7 ligation ligation NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 mAb mAb PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 Staphylococcal Staphylococcal PROPN NNP Number=Sing _ _ _ _ 12 enterotoxin enterotoxin PROPN NNP Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 SE SE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 induce induce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 rapid rapid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 gradually gradually ADV RB _ _ _ _ _ 21 accumulating accumulate VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 long long ADV RB Degree=Pos _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 lasting lasting VERB VBG VerbForm=Ger _ _ _ _ 26 tyrosine tyrosine NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 serine serine NOUN NN Number=Sing _ _ _ _ 30 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 Stat3 Stat3 NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 but but CCONJ CC _ _ _ _ _ 35 not not ADV RB _ _ _ _ _ 36 Stat5 Stat5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 allogen allogen ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 specific specific ADJ JJ Degree=Pos _ _ _ _ 42 human human ADJ JJ Degree=Pos _ _ _ _ 43 CD4 CD4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 + + SYM SYM _ _ _ _ _ 45 T t NUM CD NumType=Card _ _ _ _ 46 cell cell NOUN NN Number=Sing _ _ _ _ 47 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 3063 # text = In contrast, IL-2 induces a rapid and transient tyrosine and serine phosphorylation of Stat3. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 induces induce NOUN NNS Number=Plur _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 transient transient ADJ JJ Degree=Pos _ _ _ _ 12 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 serine serine NOUN NN Number=Sing _ _ _ _ 15 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 Stat3 Stat3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3064 # text = Compared with IL-2, CD3 ligation induces a delayed Stat3 binding to oligonucleotide probes from the ICAM-1 and IL-2R alpha promoter. 1 Compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 CD3 CD3 NUM CD NumType=Card _ _ _ _ 8 ligation ligation NOUN NN Number=Sing _ _ _ _ 9 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 delayed delayed ADJ JJ Degree=Pos _ _ _ _ 12 Stat3 Stat3 NOUN NN Number=Sing _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 oligonucleotide oligonucleotide VERB VB VerbForm=Inf _ _ _ _ 16 probes probe NOUN NNS Number=Plur _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2R 2r NOUN NN Number=Sing _ _ _ _ 26 alpha alpha NOUN NN Number=Sing _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3065 # text = CD3-mediated activation of Stat3 is almost completely inhibited by a Src kinase inhibitor (PP1), whereas IL-2-induced Stat3 activation is unaffected. 1 CD3 CD3 X LS _ _ _ _ SpaceAfter=No 2 -mediated -mediated ADJ JJ Degree=Pos _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Stat3 Stat3 NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 almost almost ADV RB _ _ _ _ _ 8 completely completely ADV RB _ _ _ _ _ 9 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 Src Src PROPN NNP Number=Sing _ _ _ _ 13 kinase kinase NOUN NN Number=Sing _ _ _ _ 14 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 PP1 Pp1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 whereas whereas SCONJ IN _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 Stat3 Stat3 NOUN NN Number=Sing _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 unaffected unaffected ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3066 # text = In conclusion, we show that CD3 ligation by mAb and SE triggers a rapid, PP1-sensitive tyrosine and serine phosphorylation of Stat3 in human CD4+ T cells. 1 In in ADP IN _ _ _ _ _ 2 conclusion conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 CD3 CD3 NUM CD NumType=Card _ _ _ _ 8 ligation ligation NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 mAb mAb PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 SE SE PROPN NNP Number=Sing _ _ _ _ 13 triggers trigger NOUN NNS Number=Plur _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 rapid rapid NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 PP1 Pp1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 20 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 serine serine NOUN NN Number=Sing _ _ _ _ 23 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 Stat3 Stat3 NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 human human ADJ JJ Degree=Pos _ _ _ _ 28 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 + + SYM SYM _ _ _ _ _ 30 T t NUM CD NumType=Card _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3067 # text = Moreover, we provide evidence that TCR/CD3 and IL-2 induce Stat3 activation via distinct signaling pathways. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 evidence evidence NOUN NN Number=Sing _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 TCR/CD3 TCR/CD3 NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 induce induce NOUN NN Number=Sing _ _ _ _ 13 Stat3 Stat3 NUM CD NumType=Card _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 via via ADP IN _ _ _ _ _ 16 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 17 signaling signaling NOUN NN Number=Sing _ _ _ _ 18 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3068 # text = Document 003003378 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003378 003003378 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3069 # text = Anti-immunoglobulin 1 Anti-immunoglobulin Anti-immunoglobulin PROPN NNP Number=Sing _ _ _ _ # sent_id = 3070 # text = M activates nuclear calcium/calmodulin-dependent protein kinase II in human B lymphocytes. 1 M m NOUN NN Number=Sing _ _ _ _ 2 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 calcium/calmodulin calcium/calmodulin NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 -dependent -dependent ADJ JJ Degree=Pos _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 II ii NUM CD NumType=Card _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3071 # text = We and others have previously shown that the nuclear protein, Ets-1, is phosphorylated in a calcium-dependent manner after ligation of immunoglobulin 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 others other NOUN NNS Number=Plur _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 previously previously ADV RB _ _ _ _ _ 6 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 Ets Ets NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 23 manner manner NOUN NN Number=Sing _ _ _ _ 24 after after ADP IN _ _ _ _ _ 25 ligation ligation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 immunoglobulin immunoglobulin NOUN NN Number=Sing _ _ _ _ # sent_id = 3072 # text = (Ig) M on B lymphocytes. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 Ig ig PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 M m NOUN NN Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 B b ADJ JJ Degree=Pos _ _ _ _ 7 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 3073 # text = As this phosphorylation was independent of protein kinase C activity, we tested whether a calcium/calmodulin-dependent protein kinase (CaM kinase) might phosphorylate the Ets-1 protein after elevation of intracellular free calcium concentrations. 1 As as ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 independent independent ADJ JJ Degree=Pos _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 kinase kinase NOUN NN Number=Sing _ _ _ _ 9 C C NOUN NN Number=Sing _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 13 tested test VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 whether whether SCONJ IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 calcium/calmodulin calcium/calmodulin NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 kinase kinase NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 CaM Cam NOUN NN Number=Sing _ _ _ _ 23 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 might might AUX MD VerbForm=Fin _ _ _ _ 26 phosphorylate phosphorylate VERB VB VerbForm=Inf _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 Ets Et NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 protein protein NOUN NN Number=Sing _ _ _ _ 32 after after ADP IN _ _ _ _ _ 33 elevation elevation NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 36 free free ADJ JJ Degree=Pos _ _ _ _ 37 calcium calcium NOUN NN Number=Sing _ _ _ _ 38 concentrations concentration NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 3074 # text = The dephosphorylated form of Ets-1 has been shown to bind to chromatin, suggesting that the operative kinase should be detectable in the nucleus. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 dephosphorylated dephosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 form form NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Ets Ets NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 10 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 bind bind VERB VB VerbForm=Inf _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 chromatin chromatin NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 operative operative NOUN NN Number=Sing _ _ _ _ 20 kinase kinase NOUN NN Number=Sing _ _ _ _ 21 should should AUX MD VerbForm=Fin _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3075 # text = We prepared nuclear extracts from two human B cell lines in which increased intracellular free calcium levels correlated with increased phosphorylation of the Ets-1 protein. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 prepared prepare VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 extracts extract NOUN NNS Number=Plur _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 two two NUM CD NumType=Card _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 lines line NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 intracellular intracelular ADJ JJ Degree=Pos _ _ _ _ 15 free free ADJ JJ Degree=Pos _ _ _ _ 16 calcium calcium NOUN NN Number=Sing _ _ _ _ 17 levels level NOUN NNS Number=Plur _ _ _ _ 18 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 Ets et NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3076 # text = Activity of the CaM kinases was determined using a synthetic peptide substrate both in the absence and presence of an inhibitor specific for the CaM kinase family, KN-62. 1 Activity activity NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 CaM Cam NOUN NN Number=Sing _ _ _ _ 5 kinases kinase NOUN NNS Number=Plur _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 determined determined VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 using use VERB VBG VerbForm=Ger _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 11 peptide peptide NOUN NN Number=Sing _ _ _ _ 12 substrate substrate NOUN NN Number=Sing _ _ _ _ 13 both both CCONJ CC _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 absence absence NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 presence presence NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 22 specific specific ADJ JJ Degree=Pos _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 CaM CaM PROPN NNP Number=Sing _ _ _ _ 26 kinase kinase NOUN NN Number=Sing _ _ _ _ 27 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 KN KN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - SYM SYM _ _ _ _ SpaceAfter=No 31 62 62 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3077 # text = Stimulation of cells with anti-IgM led to increased activity of a nuclear kinase that could phosphorylate the peptide, and this activity was reduced by 10 microM KN-62. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 anti-IgM anti-Igm NOUN NN Number=Sing _ _ _ _ 6 led lead VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 kinase kinase NOUN NN Number=Sing _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 could could AUX MD VerbForm=Fin _ _ _ _ 16 phosphorylate phosphorylate VERB VB VerbForm=Inf _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 peptide peptide NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 10 10 NUM CD NumType=Card _ _ _ _ 27 microM microm NUM CD NumType=Card _ _ _ _ 28 KN KN NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - SYM SYM _ _ _ _ SpaceAfter=No 30 62 62 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3078 # text = Kinase activity was reduced in lysates preadsorbed using an antibody specific for CaM kinase II. 1 Kinase Kinase ADJ JJ Degree=Pos _ _ _ _ 2 activity activity NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 lysates lysate NOUN NNS Number=Plur _ _ _ _ 7 preadsorbed preadsor VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 using use VERB VBG VerbForm=Ger _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 antibody antibody NOUN NN Number=Sing _ _ _ _ 11 specific specific ADJ JJ Degree=Pos _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 CaM CaM PROPN NNP Number=Sing _ _ _ _ 14 kinase kinase NOUN NN Number=Sing _ _ _ _ 15 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 3079 # text = Two-dimensional phosphopeptide maps of the Ets-1 protein from cells incubated with ionomycin or anti-IgM contained two unique phosphopeptides that were absent in untreated cells. 1 Two two NUM CD NumType=Card _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 dimensional dimensional ADJ JJ Degree=Pos _ _ _ _ 4 phosphopeptide phosphopeptide NOUN NN Number=Sing _ _ _ _ 5 maps map NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 Ets et NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 incubated incubate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 ionomycin ionomycin NOUN NN Number=Sing _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 anti anti X AFX _ _ _ _ SpaceAfter=No 19 -IgM -Igm ADJ JJ Degree=Pos _ _ _ _ 20 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 two two NUM CD NumType=Card _ _ _ _ 22 unique unique ADJ JJ Degree=Pos _ _ _ _ 23 phosphopeptides phosphopeptide NOUN NNS Number=Plur _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 absent absend VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 untreated untreated ADJ JJ Degree=Pos _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3080 # text = Incubation of isolated Ets-1 protein with purified CaM kinase II produced phosphorylation of peptides that migrated identically to those found in cells incubated with either anti-IgM or ionomycin. 1 Incubation incubation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 Ets Et NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 CaM Cam NOUN NN Number=Sing _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 II ii PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 13 produced produce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 peptides peptide NOUN NNS Number=Plur _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 migrated migrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 identically identically ADV RB _ _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 22 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 incubated incubate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 either either CCONJ CC _ _ _ _ _ 28 anti-IgM anti-Igm ADJ JJ Degree=Pos _ _ _ _ 29 or or CCONJ CC _ _ _ _ _ 30 ionomycin ionomycin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3081 # text = These data suggest a model of signal transduction by the antigen receptor on B lymphocytes in which increased intracellular free calcium can rapidly activate nuclear CaM kinase II, potentially resulting in phosphorylation and regulation of DNA-binding proteins. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 model model NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 signal signal NOUN NN Number=Sing _ _ _ _ 8 transduction transduction NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 B b ADJ JJ Degree=Pos _ _ _ _ 15 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 intracellular intracelular ADJ JJ Degree=Pos _ _ _ _ 20 free free ADJ JJ Degree=Pos _ _ _ _ 21 calcium calcium NOUN NN Number=Sing _ _ _ _ 22 can can AUX MD VerbForm=Fin _ _ _ _ 23 rapidly rapidly ADV RB _ _ _ _ _ 24 activate activate VERB VB VerbForm=Inf _ _ _ _ 25 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 26 CaM Cam NOUN NN Number=Sing _ _ _ _ 27 kinase kinase NOUN NN Number=Sing _ _ _ _ 28 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 potentially potentially ADV RB _ _ _ _ _ 31 resulting result VERB VBG VerbForm=Ger _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 regulation regulation NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT , _ _ _ _ SpaceAfter=No 39 binding binding VERB VBG VerbForm=Ger _ _ _ _ 40 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3082 # text = Document 003003384 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003384 003003384 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3083 # text = Regulation of the balance of cytokine production and the signal transducer and activator of transcription (STAT) transcription factor activity by cytokines and inflammatory synovial fluids. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 balance balance NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 7 production production NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 signal signal ADJ JJ Degree=Pos _ _ _ _ 11 transducer transducer NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 activator activator NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 STAT STAT NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 26 synovial synovial ADJ JJ Degree=Pos _ _ _ _ 27 fluids fluid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3084 # text = The balance between type 1 and 2 T helper cell cytokine production plays an important role in several animal models of autoimmunity, and skewed patterns of cytokine expression have been described in human inflammatory diseases. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 balance balance NOUN NN Number=Sing _ _ _ _ 3 between between ADP IN _ _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ _ 5 1 1 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 2 2 NUM CD NumType=Card _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 helper helper NOUN NN Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 12 production production NOUN NN Number=Sing _ _ _ _ 13 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 important important ADJ JJ Degree=Pos _ _ _ _ 16 role role NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 several several ADJ JJ Degree=Pos _ _ _ _ 19 animal animal NOUN NN Number=Sing _ _ _ _ 20 models model NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 autoimmunity autoimmunity NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 skewed skew VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 patterns pattern NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 32 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 human human ADJ JJ Degree=Pos _ _ _ _ 35 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 36 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3085 # text = Many cytokines activate signal transducer and activation of transcription (STAT) transcription factors, which, in turn, activate transcription of inflammatory effector genes. 1 Many many ADJ JJ Degree=Pos _ _ _ _ 2 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 3 activate activate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 signal signal ADJ JJ Degree=Pos _ _ _ _ 5 transducer transducer NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 STAT STAT NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 turn turn NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 activate activate ADJ JJ Degree=Pos _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 25 effector effector NOUN NN Number=Sing _ _ _ _ 26 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3086 # text = We used mononuclear cell priming cultures and inflammatory synovial fluids (SFs) derived from arthritis patients to examine the regulation of cytokine production and STAT activity by an inflammatory synovial microenvironment. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 mononuclear mononuclear NOUN NN Number=Sing _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 priming priming VERB VBG VerbForm=Ger _ _ _ _ 6 cultures culture NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 9 synovial synovial ADJ JJ Degree=Pos _ _ _ _ 10 fluids fluid NOUN NNS Number=Plur _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 SFs Sfs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 derived derive VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 arthritis arthritis DET DT Number=Sing|PronType=Dem _ _ _ _ 17 patients patient NOUN NN Number=Sing _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 examine examine VERB VB VerbForm=Inf _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 regulation regulation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 24 production production NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 STAT Stat NOUN NN Number=Sing _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 31 synovial synovial ADJ JJ Degree=Pos _ _ _ _ 32 microenvironment microenvironment NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3087 # text = Exposure to SFs during priming resulted in an 81% inhibition of interferon (IFN)-gamma, but not interleukin (IL) 4, production by effector cells generated in priming cultures. 1 Exposure exposure VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 to to PART TO _ _ _ _ _ 3 SFs SF VERB VB VerbForm=Inf _ _ _ _ 4 during during ADP IN _ _ _ _ _ 5 priming priming NOUN NN Number=Sing _ _ _ _ 6 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 81 81 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 % % SYM NN Number=Sing _ _ _ _ 11 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 interferon interferon PROPN NNP Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 - - PUNCT : _ _ _ _ SpaceAfter=No 18 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 not not ADV RB _ _ _ _ _ 22 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 production production NOUN NN Number=Sing _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 effector effector NOUN NN Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 priming priming ADJ JJ Degree=Pos _ _ _ _ 35 cultures culture NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 3088 # text = SF suppression was mediated by IL-4 and IL-10 and inhibition of IL-12 expression, and it was reversed in a dominant fashion by exogenous IL-12. 1 SF SF PROPN NNP Number=Sing _ _ _ _ 2 suppression suppression NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 4 4 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 10 10 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 12 12 NUM CD NumType=Card _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 reversed reverse VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 28 fashion fashion NOUN NN Number=Sing _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 31 IL il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - SYM SYM _ _ _ _ SpaceAfter=No 33 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 3089 # text = SFs blocked the sustained activity of transcription factor Stat1, but not Stat3, during the priming period, and Stat1 activity was differentially regulated by cytokines in parallel with their positive or negative regulation of IFN-gamma production. 1 SFs Sfs NOUN NNS Number=Plur _ _ _ _ 2 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 sustained sustain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 Stat1 stat1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 not not ADV RB _ _ _ _ _ 13 Stat3 Stat3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 during during ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 priming priming ADJ JJ Degree=Pos _ _ _ _ 18 period period NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 Stat1 Stat1 NUM CD NumType=Card _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 differentially differentially ADV RB _ _ _ _ _ 25 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 parallel parallel NOUN NN Number=Sing _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 32 positive positive ADJ JJ Degree=Pos _ _ _ _ 33 or or CCONJ CC _ _ _ _ _ 34 negative negative ADJ JJ Degree=Pos _ _ _ _ 35 regulation regulation NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 gamma gamma NOUN NN Number=Sing _ _ _ _ 40 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 3090 # text = Active Stat3, but not Stat1, was detected in cells from inflamed joints. 1 Active active ADJ JJ Degree=Pos _ _ _ _ 2 Stat3 Stat3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 but but CCONJ CC _ _ _ _ _ 5 not not ADV RB _ _ _ _ _ 6 Stat1 stat1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 inflamed inflam VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 joints joint NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3091 # text = These results suggest a role for altered balance of Stat1 and Stat3 transcriptional activity in the regulation of T cell differentiation and in the pathogenesis of inflammatory synovitis. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 altered alter VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 balance balance NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 Stat1 Stat1 PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 Stat3 Stat3 NUM CD NumType=Card _ _ _ _ 13 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 regulation regulation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 28 synovitis synovitis NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3092 # text = Document 003003386 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003386 003003386 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3093 # text = CD40, but not lipopolysaccharide and anti-IgM stimulation of primary B lymphocytes, leads to a persistent nuclear accumulation of RelB. 1 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 but but CCONJ CC _ _ _ _ _ 4 not not ADV RB _ _ _ _ _ 5 lipopolysaccharide lipopolysaccharide ADJ JJ Degree=Pos _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 anti-IgM anti-igm ADJ JJ Degree=Pos _ _ _ _ 8 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 primary primary ADJ JJ Degree=Pos _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 persistent persistent ADJ JJ Degree=Pos _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 RelB RelB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3094 # text = In this study we analyzed the effect of CD40 stimulation on the activity and nuclear appearance of Rel/nuclear factor kappaB (NF-kappaB) factors in primary murine B lymphocytes. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 effect effect NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 CD40 CD40 NUM CD NumType=Card _ _ _ _ 10 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 appearance appearance NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 / / PUNCT , _ _ _ _ SpaceAfter=No 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 factors factor NOUN NNS Number=Plur _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 primary primary ADJ JJ Degree=Pos _ _ _ _ 31 murine murine NOUN NN Number=Sing _ _ _ _ 32 B b NOUN NN Number=Sing _ _ _ _ 33 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 3095 # text = We show that triggering of CD40 signaling pathway(s) by CD40 ligands expressed on L cells led to strong activation of an NF-kappaB-controlled beta-globin reporter gene in primary B lymphocytes from transgenic mice. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 triggering triggering VERB VBG VerbForm=Ger _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 7 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 8 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 s s X AFX _ _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 14 ligands ligand NOUN NNS Number=Plur _ _ _ _ 15 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 L l ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 strong strong ADJ JJ Degree=Pos _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 controlled control VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 globin globin ADJ JJ Degree=Pos _ _ _ _ 33 reporter reporter NOUN NN Number=Sing _ _ _ _ 34 gene gene NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 primary primary ADJ JJ Degree=Pos _ _ _ _ 37 B b NOUN NN Number=Sing _ _ _ _ 38 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 39 from from ADP IN _ _ _ _ _ 40 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 41 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3096 # text = Analyses of nuclear translocation of individual members of Rel proteins after CD40 induction of primary B cells showed a strong and long-lasting accumulation of RelB and, less pronounced, of c-Rel. 1 Analyses analysis NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 translocation translocation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 individual individual ADJ JJ Degree=Pos _ _ _ _ 7 members member NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 Rel Rel NOUN NN Number=Sing _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ _ 11 after after ADP IN _ _ _ _ _ 12 CD40 CD40 NUM CD NumType=Card _ _ _ _ 13 induction induction NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 primary primary ADJ JJ Degree=Pos _ _ _ _ 16 B b ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 strong strong ADJ JJ Degree=Pos _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 lasting lasting VERB VBG VerbForm=Ger _ _ _ _ 25 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 RelB Relb NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 less less ADV RBR Degree=Cmp _ _ _ _ 31 pronounced pronounce ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3097 # text = LPS stimulation did not give rise to a persistent nuclear accumulation of RelB and c-Rel, whereas nuclear c-Rel, but not RelB, accumulated after B cell receptor stimulation. 1 LPS Lps NOUN NN Number=Sing _ _ _ _ 2 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 3 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 give give VERB VB VerbForm=Inf _ _ _ _ 6 rise rise NOUN NN Number=Sing _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 persistent persistent ADJ JJ Degree=Pos _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 RelB Relb NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 whereas whereas SCONJ IN _ _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 but but CCONJ CC _ _ _ _ _ 26 not not ADV RB _ _ _ _ _ 27 RelB Relb NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 accumulated accumulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 after after ADP IN _ _ _ _ _ 31 B b NOUN NN Number=Sing _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 receptor receptor NOUN NN Number=Sing _ _ _ _ 34 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 3098 # text = CD40 induced not only nuclear translocation but also de novo synthesis of RelB RNA and protein. 1 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 2 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 not not ADV RB _ _ _ _ _ 4 only only ADV RB _ _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 translocation translocation NOUN NN Number=Sing _ _ _ _ 7 but but CCONJ CC _ _ _ _ _ 8 also also ADV RB _ _ _ _ _ 9 de de X FW Foreign=Yes _ _ _ _ 10 novo novo ADJ JJ Degree=Pos _ _ _ _ 11 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 RelB RelB PROPN NNP Number=Sing _ _ _ _ 14 RNA RNA PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3099 # text = S107 plasmacytoma cells, which express CD40 but are defective for the nuclear appearance of p50/p65-NF-kappaB, do not express RelB after CD40 stimulation. 1 S107 S107 NUM CD NumType=Card _ _ _ _ 2 plasmacytoma plasmacytoma NOUN NN Number=Sing _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 which which DET WDT PronType=Int _ _ _ _ 6 express express ADJ JJ Degree=Pos _ _ _ _ 7 CD40 CD40 NOUN NN Number=Sing _ _ _ _ 8 but but CCONJ CC _ _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 defective defective ADJ JJ Degree=Pos _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 appearance appearance NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 p50/p65 p50/p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 do do AUX VB Mood=Imp|VerbForm=Fin _ _ _ _ 23 not not PART RB _ _ _ _ _ 24 express express VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 25 RelB RelB NOUN NN Number=Sing _ _ _ _ 26 after after ADP IN _ _ _ _ _ 27 CD40 CD40 NUM CD NumType=Card _ _ _ _ 28 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3100 # text = In S107 cells stably transfected with relB genes, stimulation of nuclear 1 In in ADP IN _ _ _ _ _ 2 S107 S107 NUM CD NumType=Card _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 stably stably ADV RB _ _ _ _ _ 5 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 relB relb NOUN NN Number=Sing _ _ _ _ 8 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ # sent_id = 3101 # text = RelB translocation by CD40 was observed. 1 RelB Relb VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 translocation translocation NOUN NN Number=Sing _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 observed observed ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ _ # sent_id = 3102 # text = These results indicate that stimulation of CD40 signaling pathways exerts a long-lasting stimulatory effect on both the transcription and nuclear translocation of RelB. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 CD40 CD40 NUM CD NumType=Card _ _ _ _ 8 signaling signaling VERB VBG VerbForm=Ger _ _ _ _ 9 pathways pathways NOUN NNS Number=Plur _ _ _ _ 10 exerts exert NOUN NNS Number=Plur _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 long long ADV RB Degree=Pos _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 lasting lasting VERB VBG VerbForm=Ger _ _ _ _ 15 stimulatory stimulatory ADJ JJ Degree=Pos _ _ _ _ 16 effect effect NOUN NN Number=Sing _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 both both CCONJ CC _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 23 translocation translocation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 RelB RelB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3103 # text = Since LPS and anti-IgM were unable to activate RelB, CD40 appears to trigger a special program of gene expression involved in the proliferation and/or differentiation of B lymphocytes. 1 Since since SCONJ IN _ _ _ _ _ 2 LPS LPS PROPN NNP Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 anti-IgM anti-IgM ADJ JJ Degree=Pos _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 unable unable ADJ JJ Degree=Pos _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 activate activate VERB VB VerbForm=Inf _ _ _ _ 9 RelB RelB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 12 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 trigger trigger VERB VB VerbForm=Inf _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 special special ADJ JJ Degree=Pos _ _ _ _ 17 program program NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 involved involved ADJ JJ Degree=Pos _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ SpaceAfter=No 26 / / PUNCT , _ _ _ _ SpaceAfter=No 27 or or CCONJ CC _ _ _ _ _ 28 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 B b ADJ JJ Degree=Pos _ _ _ _ 31 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3104 # text = Document 003003387 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003387 003003387 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3105 # text = Temperature-induced down-regulation of the glucocorticoid receptor in peripheral blood mononuclear leucocyte in patients with sepsis or septic shock. 1 Temperature temperature NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 down down NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 regulation regulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 13 blood blood NOUN NN Number=Sing _ _ _ _ 14 mononuclear mononuclear NOUN NN Number=Sing _ _ _ _ 15 leucocyte leucocyte NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 patients patient NOUN NNS Number=Plur _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 sepsis sepsis NOUN NN Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 septic septic ADJ JJ Degree=Pos _ _ _ _ 22 shock shock NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3106 # text = OBJECTIVE: Activation of the hypothalamic-pituitary-adrenal axis is of vital importance during critical illness. 1 OBJECTIVE objective NUM CD NumType=Card _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Activation Activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 hypothalamic hypothalamic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 pituitary pituitary NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 adrenal adrenal ADJ JJ Degree=Pos _ _ _ _ 11 axis axis NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 vital vital ADJ JJ Degree=Pos _ _ _ _ 15 importance importance NOUN NN Number=Sing _ _ _ _ 16 during during ADP IN _ _ _ _ _ 17 critical critical ADJ JJ Degree=Pos _ _ _ _ 18 illness illness NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3107 # text = We have studied the adaptive mechanisms which occur at the level of the glucocorticoid receptor in glucocorticoid target tissues in patients with sepsis or septic shock. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 studied studie VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 adaptive adaptive ADJ JJ Degree=Pos _ _ _ _ 6 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 occur occur VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 at at ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 level level NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 15 receptor receptor NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 18 target target NOUN NN Number=Sing _ _ _ _ 19 tissues tissue NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 patients patient NOUN NNS Number=Plur _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 sepsis sepsis NOUN NN Number=Sing _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 septic septic ADJ JJ Degree=Pos _ _ _ _ 26 shock shock NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3108 # text = DESIGN: The effects of hypercortisolaemia, hyperthermia and cellular composition on number of glucocorticoid receptors per cell and their affinity were evaluated, both in vitro and in vivo, in peripheral blood mononuclear leucocytes of control subjects and in patients with sepsis or septic shock. 1 DESIGN Design NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 The the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effects effect NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 hypercortisolaemia hypercortisolaemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 hyperthermia hyperthermia NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 11 composition composition NOUN NN Number=Sing _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 number number NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 16 receptors receptor NOUN NNS Number=Plur _ _ _ _ 17 per per ADP IN _ _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 affinity affinity NOUN NN Number=Sing _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 evaluated evaluate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 both both CCONJ CC _ _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 vitro vitro NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 34 blood blood NOUN NN Number=Sing _ _ _ _ 35 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 36 leucocytes leucocyte NOUN NNS Number=Plur _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 control control NOUN NN Number=Sing _ _ _ _ 39 subjects subjects NOUN NNS Number=Plur _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 patients patient NOUN NN Number=Sing _ _ _ _ 43 with with ADP IN _ _ _ _ _ 44 sepsis sepsis NOUN NN Number=Sing _ _ _ _ 45 or or CCONJ CC _ _ _ _ _ 46 septic septic ADJ JJ Degree=Pos _ _ _ _ 47 shock shock NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 3109 # text = SUBJECTS: Fifteen patients (age 25-79) with sepsis or septic shock who were admitted to an intensive care unit were studied. 1 SUBJECTS sUBJECTs NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Fifteen fifteen NUM CD NumType=Card _ _ _ _ 4 patients patient NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 age age NOUN NN Number=Sing _ _ _ _ 7 25 25 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - SYM SYM _ _ _ _ SpaceAfter=No 9 79 79 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 sepsis sepsis NOUN NN Number=Sing _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 septic septic ADJ JJ Degree=Pos _ _ _ _ 15 shock shock NOUN NN Number=Sing _ _ _ _ 16 who who PRON WP PronType=Rel _ _ _ _ 17 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 admitted admit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 intensive intensive ADJ JJ Degree=Pos _ _ _ _ 22 care care NOUN NN Number=Sing _ _ _ _ 23 unit unit NOUN NN Number=Sing _ _ _ _ 24 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3110 # text = The control group consisted of 24 healthy laboratory employees. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 control control NOUN NN Number=Sing _ _ _ _ 3 group group NOUN NN Number=Sing _ _ _ _ 4 consisted consist VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 24 24 NUM CD NumType=Card _ _ _ _ 7 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 8 laboratory laboratory NOUN NN Number=Sing _ _ _ _ 9 employees employee NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 3111 # text = MEASUREMENTS: 1 MEASUREMENTS Measurements NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 3112 # text = The binding capacity and affinity of the glucocorticoid receptors were measured and compared to clinical data and the plasma cortisol concentrations. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 binding binding VERB VBG VerbForm=Ger _ _ _ _ 3 capacity capacity NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 affinity affinity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 9 receptors receptor NOUN NNS Number=Plur _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 measured measure VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 16 data data NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 plasma plasma NOUN NN Number=Sing _ _ _ _ 20 cortisol cortisol NOUN NN Number=Sing _ _ _ _ 21 concentrations concentration NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3113 # text = RESULTS: Hypercortisolaemia, in vitro, resulted in a decreased affinity and a decreased binding capacity of the glucocorticoid receptor. 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Hypercortisolaemia Hypercortisolaemia PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 vitro vitro PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 decreased decreased VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 affinity affinity NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 capacity capacity NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3114 # text = In vitro, hyperthermia as well as variations in the cellular composition did not influence the glucocorticoid receptor. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 hyperthermia hyperthermia NOUN NN Number=Sing _ _ _ _ 5 as as ADV RB _ _ _ _ _ 6 well well ADV RB Degree=Pos _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 variations variation NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 12 composition composition NOUN NN Number=Sing _ _ _ _ 13 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 influence influence VERB VB VerbForm=Inf _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 18 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3115 # text = In vivo, there was no change in the number of receptors per cell in patients with sepsis or septic shock as compared to healthy controls. 1 In in ADP IN _ _ _ _ _ 2 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 there there PRON EX _ _ _ _ _ 5 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 no no DET DT _ _ _ _ _ 7 change change NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 number number NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 receptors receptor NOUN NNS Number=Plur _ _ _ _ 13 per per ADP IN _ _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 patients patient NOUN NNS Number=Plur _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 sepsis sepsis NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 septic septic ADJ JJ Degree=Pos _ _ _ _ 21 shock shock NOUN NN Number=Sing _ _ _ _ 22 as as SCONJ IN _ _ _ _ _ 23 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 26 controls control NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3116 # text = However, a decreased affinity of the glucocorticoid receptor was observed. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 affinity affinity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 3117 # text = There was a weak but significant negative correlation between body temperature and the number of glucocorticoid receptors in the patient group. 1 There there PRON EX _ _ _ _ _ 2 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 weak weak ADJ JJ Degree=Pos _ _ _ _ 5 but but CCONJ CC _ _ _ _ _ 6 significant significant ADJ JJ Degree=Pos _ _ _ _ 7 negative negative ADJ JJ Degree=Pos _ _ _ _ 8 correlation correlation NOUN NN Number=Sing _ _ _ _ 9 between between ADP IN _ _ _ _ _ 10 body body NOUN NN Number=Sing _ _ _ _ 11 temperature temperature NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 number number NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 17 receptors receptor NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 patient patient NOUN NN Number=Sing _ _ _ _ 21 group group NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3118 # text = There was no relation between circulating cortisol concentrations and glucocorticoid receptor affinity and number. 1 There there PRON EX _ _ _ _ _ 2 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 no no DET DT _ _ _ _ _ 4 relation relation NOUN NN Number=Sing _ _ _ _ 5 between between ADP IN _ _ _ _ _ 6 circulating circulat VERB VBG VerbForm=Ger _ _ _ _ 7 cortisol cortisol NOUN NN Number=Sing _ _ _ _ 8 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 affinity affinity NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 number number NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3119 # text = CONCLUSIONS: 1 CONCLUSIONS conclusion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 3120 # text = There is no obvious regulation of the number of glucocorticoid receptors by plasma cortisol concentrations in vivo. 1 There there PRON EX _ _ _ _ _ 2 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 no no DET DT _ _ _ _ _ 4 obvious obvious ADJ JJ Degree=Pos _ _ _ _ 5 regulation regulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 number number NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 11 receptors receptor NOUN NNS Number=Plur _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 plasma plasma NOUN NN Number=Sing _ _ _ _ 14 cortisol cortisol NOUN NN Number=Sing _ _ _ _ 15 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3121 # text = The decreased affinity of the glucocorticoid receptor together with the negative correlation between hyperthermia and the number of glucocorticoid receptors in patients with sepsis or septic shock suggest that hypothalamic-pituitary-adrenal axis activation during critical illness is accompanied by peripheral adaptation in glucocorticoid receptor number and affinity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 affinity affinity NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 together together ADV RB _ _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 negative negative ADJ JJ Degree=Pos _ _ _ _ 12 correlation correlation NOUN NN Number=Sing _ _ _ _ 13 between between ADP IN _ _ _ _ _ 14 hyperthermia hyperthermia NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 number number NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 20 receptors receptor NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 patients patient NOUN NNS Number=Plur _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 sepsis sepsis NOUN NN Number=Sing _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 septic septic ADJ JJ Degree=Pos _ _ _ _ 27 shock shock NOUN NN Number=Sing _ _ _ _ 28 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 that that SCONJ IN _ _ _ _ _ 30 hypothalamic hypothalamic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 pituitary pituitary NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 adrenal adrenal ADJ JJ Degree=Pos _ _ _ _ 35 axis axis NOUN NN Number=Sing _ _ _ _ 36 activation activation NOUN NN Number=Sing _ _ _ _ 37 during during ADP IN _ _ _ _ _ 38 critical critical ADJ JJ Degree=Pos _ _ _ _ 39 illness illness NOUN NN Number=Sing _ _ _ _ 40 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 41 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 42 by by ADP IN _ _ _ _ _ 43 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 44 adaptation adaptation NOUN NN Number=Sing _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 47 receptor receptor NOUN NN Number=Sing _ _ _ _ 48 number number NOUN NN Number=Sing _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 affinity affinity NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3122 # text = Document 003003388 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003388 003003388 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3123 # text = Bacterial peptidoglycan induces CD14-dependent activation of transcription factors CREB/ATF and AP-1. 1 Bacterial Bacterial ADJ JJ Degree=Pos _ _ _ _ 2 peptidoglycan peptidoglycan ADJ JJ Degree=Pos _ _ _ _ 3 induces induce NOUN NNS Number=Plur _ _ _ _ 4 CD14 CD14 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT : _ _ _ _ SpaceAfter=No 6 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ _ 11 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 ATF ATF PROPN NNP Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3124 # text = Peptidoglycan (PGN), the major cell wall component of Gram-positive bacteria, induces secretion of cytokines in macrophages through CD14, the pattern recognition receptor that binds lipopolysaccharide and other microbial products. 1 Peptidoglycan Peptidoglycan PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 PGN PGN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 major major ADJ JJ Degree=Pos _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 wall wall NOUN NN Number=Sing _ _ _ _ 10 component component NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 Gram- Gram- PUNCT : _ _ _ _ SpaceAfter=No 13 positive positive ADJ JJ Degree=Pos _ _ _ _ 14 bacteria bacteria NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 induces induce NOUN NNS Number=Plur _ _ _ _ 17 secretion secretion NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 22 through through ADP IN _ _ _ _ _ 23 CD14 CD14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 pattern pattern ADJ JJ Degree=Pos _ _ _ _ 27 recognition recognition NOUN NN Number=Sing _ _ _ _ 28 receptor receptor NOUN NN Number=Sing _ _ _ _ 29 that that PRON WDT PronType=Rel _ _ _ _ 30 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 other other ADJ JJ Degree=Pos _ _ _ _ 34 microbial microbial ADJ JJ Degree=Pos _ _ _ _ 35 products product NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 3125 # text = To begin to elucidate the mechanisms that regulate the transcription of cytokine genes, we wanted to determine which transcription factors are activated by PGN in mouse RAW264.7 and human THP-1 macrophage cells. 1 To to PART TO _ _ _ _ _ 2 begin begin VERB VB VerbForm=Inf _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 elucidate elucidate VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 16 wanted want VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 determine determine VERB VB VerbForm=Inf _ _ _ _ 19 which which DET WDT PronType=Int _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factors factor NOUN NNS Number=Plur _ _ _ _ 22 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 PGN Pgn PROPN NNP Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 mouse mouse NOUN NN Number=Sing _ _ _ _ 28 RAW RAW PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 264.7 264.7 NUM CD NumType=Card _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 human human ADJ JJ Degree=Pos _ _ _ _ 32 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ _ 35 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3126 # text = Our results demonstrated that: (i) PGN induced phosphorylation of the transcription factors ATF-1 and CREB; (ii) ATF-1 and CREB bound DNA as a dimer and induced transcriptional activation of a CRE reporter plasmid, which was inhibited by dominant negative CREB and ATF-1; (iii) PGN induced phosphorylation of c-Jun, protein synthesis of JunB and c-Fos, and transcriptional activation of the AP-1 reporter plasmid, which was inhibited by dominant negative c-Fos; and (iv) PGN-induced activation of CREB/ATF and AP-1 was mediated through CD14. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ SpaceAfter=No 5 : : PUNCT : _ _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 i i X LS _ _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 PGN Pgn ADP IN _ _ _ _ _ 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ _ 16 ATF ATF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 CREB Creb NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ; ; PUNCT , _ _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 ii ii X LS _ _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 ATF ATF NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 CREB CREB PROPN NNP Number=Sing _ _ _ _ 30 bound bound ADJ JJ Degree=Pos _ _ _ _ 31 DNA dna NOUN NN Number=Sing _ _ _ _ 32 as as ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 dimer dimer NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 38 activation activation NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 41 CRE CRE ADJ JJ Degree=Pos _ _ _ _ 42 reporter reporter NOUN NN Number=Sing _ _ _ _ 43 plasmid plasmid NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 which which PRON WDT PronType=Rel _ _ _ _ 46 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 47 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 48 by by ADP IN _ _ _ _ _ 49 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 50 negative negative ADJ JJ Degree=Pos _ _ _ _ 51 CREB Creb NOUN NN Number=Sing _ _ _ _ 52 and and CCONJ CC _ _ _ _ _ 53 ATF Atf NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 56 ; ; PUNCT , _ _ _ _ _ 57 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 58 iii iii X LS _ _ _ _ SpaceAfter=No 59 ) ) PUNCT -RRB- _ _ _ _ _ 60 PGN Pgn ADP IN _ _ _ _ _ 61 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 62 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 63 of of ADP IN _ _ _ _ _ 64 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 65 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 66 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 67 , , PUNCT , _ _ _ _ _ 68 protein protein NOUN NN Number=Sing _ _ _ _ 69 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 70 of of ADP IN _ _ _ _ _ 71 JunB JunB PROPN NNP Number=Sing _ _ _ _ 72 and and CCONJ CC _ _ _ _ _ 73 c- c- SYM NFP _ _ _ _ SpaceAfter=No 74 Fos Fo PROPN NNP Number=Sing _ _ _ SpaceAfter=No 75 , , PUNCT , _ _ _ _ _ 76 and and CCONJ CC _ _ _ _ _ 77 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 78 activation activation NOUN NN Number=Sing _ _ _ _ 79 of of ADP IN _ _ _ _ _ 80 the the DET DT Definite=Def|PronType=Art _ _ _ _ 81 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 82 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 83 1 1 NUM CD NumType=Card _ _ _ _ 84 reporter reporter NOUN NN Number=Sing _ _ _ _ 85 plasmid plasmid NOUN NN Number=Sing _ _ _ SpaceAfter=No 86 , , PUNCT , _ _ _ _ _ 87 which which PRON WDT PronType=Rel _ _ _ _ 88 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 89 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 90 by by ADP IN _ _ _ _ _ 91 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 92 negative negative ADJ JJ Degree=Pos _ _ _ _ 93 c- c- SYM NFP _ _ _ _ SpaceAfter=No 94 Fos Fos PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 95 ; ; PUNCT , _ _ _ _ _ 96 and and CCONJ CC _ _ _ _ _ 97 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 98 iv iv X ADD _ _ _ _ SpaceAfter=No 99 ) ) PUNCT -RRB- _ _ _ _ _ 100 PGN Pgn ADP IN _ _ _ _ SpaceAfter=No 101 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 102 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 103 activation activation NOUN NN Number=Sing _ _ _ _ 104 of of ADP IN _ _ _ _ _ 105 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 106 / / PUNCT , _ _ _ _ SpaceAfter=No 107 ATF ATF PROPN NNP Number=Sing _ _ _ _ 108 and and CCONJ CC _ _ _ _ _ 109 AP Ap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 110 - - PUNCT , _ _ _ _ SpaceAfter=No 111 1 1 NUM CD NumType=Card _ _ _ _ 112 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 113 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 114 through through ADP IN _ _ _ _ _ 115 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 116 14 14 NUM CD NumType=Card _ _ _ SpaceAfter=No 117 . . PUNCT . _ _ _ _ _ # sent_id = 3127 # text = This is the first study to demonstrate activation of CREB/ATF and AP-1 transcription factors by PGN or by any other component of Gram-positive bacteria. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 5 study study NOUN NN Number=Sing _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 demonstrate demonstrate VERB VB VerbForm=Inf _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 ATF ATF PROPN NNP Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 factors factor NOUN NNS Number=Plur _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 PGN PGN PROPN NNP Number=Sing _ _ _ _ 21 or or CCONJ CC _ _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 any any DET DT _ _ _ _ _ 24 other other ADJ JJ Degree=Pos _ _ _ _ 25 component component NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 Gram- Gram- SYM NFP _ _ _ _ SpaceAfter=No 28 positive positive ADJ JJ Degree=Pos _ _ _ _ 29 bacteria bacteria NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3128 # text = Document 003003389 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003389 003003389 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3129 # text = Nonradioactive quantification of glucocorticoid receptor expression during differentiation of human monocytic cells (U937). 1 Nonradioactive Nonradioactive ADJ JJ Degree=Pos _ _ _ _ 2 quantification quantification NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 during during ADP IN _ _ _ _ _ 8 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 U937 U937 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3130 # text = We describe a method for relative quantification of specific mRNA using a nonradioactive assay based on DNA strand competition between identical sequences of biotin- and fluorescein-labeled amplicon (probe) and unlabeled amplicon (target) during hybridization. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 describe describe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 method method NOUN NN Number=Sing _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 relative relative ADJ JJ Degree=Pos _ _ _ _ 7 quantification quantification NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 11 using use VERB VBG VerbForm=Ger _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 nonradioactive nonradioactive ADJ JJ Degree=Pos _ _ _ _ 14 assay assay NOUN NN Number=Sing _ _ _ _ 15 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 DNA Dna NOUN NN Number=Sing _ _ _ _ 18 strand strand NOUN NN Number=Sing _ _ _ _ 19 competition competition NOUN NN Number=Sing _ _ _ _ 20 between between ADP IN _ _ _ _ _ 21 identical identical ADJ JJ Degree=Pos _ _ _ _ 22 sequences sequence NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 biotin biotin NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 fluorescein fluorescein NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 labeled label VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 amplicon amplicon NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 probe probe NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 unlabeled unlabel ADJ JJ Degree=Pos _ _ _ _ 36 amplicon amplicon NOUN NN Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 target target NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 during during ADP IN _ _ _ _ _ 41 hybridization hybridization NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3131 # text = As the target quantity increased, that of the double-labeled probe decreased in accordance with the mass action law. 1 As as SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 target target NOUN NN Number=Sing _ _ _ _ 4 quantity quantity NOUN NN Number=Sing _ _ _ _ 5 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 labeled label VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 probe probe NOUN NN Number=Sing _ _ _ _ 14 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 accordance accordance NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 mass mass ADJ JJ Degree=Pos _ _ _ _ 20 action action NOUN NN Number=Sing _ _ _ _ 21 law law NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3132 # text = This technique was successfully applied to evaluate differences in glucocorticoid receptor expression in U937 cells before and after the addition of potent differentiation inducers: 12-O-tetradecanoylphorbol 13-acetate (TPA) and a combination of all-trans retinoic acid (RA) and 1,25-dihydroxyvitamin D2 (VD). 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 technique technique NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 successfully successfully ADV RB _ _ _ _ _ 5 applied apply VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 evaluate evaluate VERB VB VerbForm=Inf _ _ _ _ 8 differences difference NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 U937 U937 NUM CD NumType=Card _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 before before ADV RB _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 after after ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 addition addition NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 potent potent NOUN NN Number=Sing _ _ _ _ 23 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 24 inducers inducer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 : : PUNCT : _ _ _ _ _ 26 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 -O -o NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 tetradecanoylphorbol tetradecanoylphorbol NOUN NN Number=Sing _ _ _ _ 30 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - PUNCT : _ _ _ _ SpaceAfter=No 32 acetate acetate NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 TPA TPA NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 combination combination NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 all all DET DT _ _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 trans tran NOUN NNS Number=Plur _ _ _ _ 43 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 44 acid acid NOUN NN Number=Sing _ _ _ _ 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 RA RA X AFX _ _ _ _ SpaceAfter=No 47 ) ) PUNCT -RRB- _ _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 dihydroxyvitamin dihydroxyvitamin NOUN NN Number=Sing _ _ _ _ 52 D2 d2 NOUN NN Number=Sing _ _ _ _ 53 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 54 VD VD NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 3133 # text = We observed that TPA treatment was associated with an increase in specific binding of [3H]dexamethasone and up-regulation of GR mRNA while no enhanced GR expression was perceived with RA/VD treatment. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 TPA TPA DET DT Definite=Ind|PronType=Art _ _ _ _ 5 treatment treatment NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 increase increase NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 binding binding NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 H] h] NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 regulation regulation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 GR GR PROPN NNP Number=Sing _ _ _ _ 25 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 26 while while SCONJ IN _ _ _ _ _ 27 no no DET DT _ _ _ _ _ 28 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 GR Gr NOUN NN Number=Sing _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 32 perceived perceive VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 / / PUNCT , _ _ _ _ SpaceAfter=No 36 VD Vd ADJ JJ Degree=Pos _ _ _ _ 37 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3134 # text = Document 003003390 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003390 003003390 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3135 # text = Alternative polyadenylation events contribute to the induction of NF-ATc in effector T cells. 1 Alternative alternative ADJ JJ Degree=Pos _ _ _ _ 2 polyadenylation polyadenylation NOUN NN Number=Sing _ _ _ _ 3 events event NOUN NNS Number=Plur _ _ _ _ 4 contribute contribute VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 induction induction NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 ATc ATc PROPN NNP Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 effector effector NOUN NN Number=Sing _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3136 # text = The transcription factor NF-ATc is synthesized in three prominent isoforms. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 ATc ATc PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 synthesized synthesize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 three three NUM CD NumType=Card _ _ _ _ 11 prominent prominent ADJ JJ Degree=Pos _ _ _ _ 12 isoforms isoform NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 3137 # text = These differ in the length of their C terminal peptides and mode of synthesis. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 differ differ NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 length length NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 8 C c X GW _ _ _ _ _ 9 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 10 peptides peptide NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 mode mode NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3138 # text = Due to a switch from the use of a 3' polyA site to a more proximal polyA site, NF-ATc expression switches from the synthesis of the two longer isoforms in naive T cells to that of short isoform A in T effector cells. 1 Due due ADP IN _ _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 switch switch NOUN NN Number=Sing _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 use use NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ' ' PUNCT `` _ _ _ _ _ 12 polyA polya NOUN NN Number=Sing _ _ _ _ 13 site site NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 more more ADV RBR _ _ _ _ _ 17 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 18 polyA polya NOUN NN Number=Sing _ _ _ _ 19 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 ATc ATc PROPN NNP Number=Sing _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 switches switche VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 from from ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 two two NUM CD NumType=Card _ _ _ _ 32 longer longer ADJ JJ Degree=Pos _ _ _ _ 33 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 naive naive ADJ JJ Degree=Pos _ _ _ _ 36 T t PROPN NNP Number=Sing _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ _ 38 to to ADP IN _ _ _ _ _ 39 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 short short ADJ JJ Degree=Pos _ _ _ _ 42 isoform isoform NOUN NN Number=Sing _ _ _ _ 43 A a NOUN NN Number=Sing _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 T t PROPN NNP Number=Sing _ _ _ _ 46 effector effector NOUN NN Number=Sing _ _ _ _ 47 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 3139 # text = The relative low binding affinity of cleavage stimulation factor CstF-64 to the proximal polyA site seems to contribute to its neglect in naive T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 relative relative ADJ JJ Degree=Pos _ _ _ _ 3 low low NOUN NN Number=Sing _ _ _ _ 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 affinity affinity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 cleavage cleavage NOUN NN Number=Sing _ _ _ _ 8 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 CstF CstF ADP IN _ _ _ _ SpaceAfter=No 11 -64 -64 NUM CD NumType=Card _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 15 polyA polya NOUN NN Number=Sing _ _ _ _ 16 site site NOUN NN Number=Sing _ _ _ _ 17 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 22 neglect neglect NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 naive naive ADJ JJ Degree=Pos _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3140 # text = These alternative polyadenylation events ensure the rapid accumulation of high concentrations of NF-ATc necessary to exceed critical threshold levels of NF-ATc for gene induction in effector T cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 3 polyadenylation polyadenylation NOUN NN Number=Sing _ _ _ _ 4 events event NOUN NNS Number=Plur _ _ _ _ 5 ensure ensure VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 8 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 high high ADJ JJ Degree=Pos _ _ _ _ 11 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 ATc ATc PROPN NNP Number=Sing _ _ _ _ 16 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 exceed exceed VERB VB VerbForm=Inf _ _ _ _ 19 critical critical ADJ JJ Degree=Pos _ _ _ _ 20 threshold threshold NOUN NN Number=Sing _ _ _ _ 21 levels level NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 ATc ATc PROPN NNP Number=Sing _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 induction induction NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 effector effector NOUN NN Number=Sing _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3141 # text = Document 003003392 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003392 003003392 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3142 # text = Direct demonstration of NFATp dephosphorylation and nuclear localization in activated HT-2 cells using a specific NFATp polyclonal antibody. 1 Direct direct ADJ JJ Degree=Pos _ _ _ _ 2 demonstration demonstration NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 5 dephosphorylation dephosphorylation NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 localization localization NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 HT HT NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 using use VERB VBG VerbForm=Ger _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 19 polyclonal polyclonal ADJ JJ Degree=Pos _ _ _ _ 20 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3143 # text = Nuclear factor of activated T cells (NFAT) regulates transcription of a number of cytokine genes, and NFAT DNA binding activity is stimulated following T cell activation. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 T T PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 number number NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 NFAT Nfat SCONJ IN _ _ _ _ _ 21 DNA dna NOUN NN Number=Sing _ _ _ _ 22 binding binding VERB VBG VerbForm=Ger _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 following follow VERB VBG VerbForm=Ger _ _ _ _ 27 T t PROPN NNP Number=Sing _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3144 # text = Several lines of evidence have suggested that NFAT is a substrate for calcineurin, a serine/threonine phosphatase. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 lines line NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 evidence evidence NOUN NN Number=Sing _ _ _ _ 5 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 suggested suggest VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 NFAT Nfat PRON DT Number=Sing|PronType=Dem _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 substrate substrate NOUN NN Number=Sing _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 calcineurin calcineurin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 threonine threonine NUM CD NumType=Card _ _ _ _ 19 phosphatase phosphatase NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3145 # text = Using a polyclonal antibody to murine NFATp, Western blot analysis of various mouse tissues demonstrated that the 110-130-kDa 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 polyclonal polyclonal ADJ JJ Degree=Pos _ _ _ _ 4 antibody antibody NOUN NN Number=Sing _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 murine murine VERB VB VerbForm=Inf _ _ _ _ 7 NFATp NFATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 Western western ADJ JJ Degree=Pos _ _ _ _ 10 blot blot NOUN NN Number=Sing _ _ _ _ 11 analysis analysis NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 various various ADJ JJ Degree=Pos _ _ _ _ 14 mouse mouse NOUN NN Number=Sing _ _ _ _ 15 tissues tissue NOUN NNS Number=Plur _ _ _ _ 16 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 110- 110- SYM NFP _ _ _ _ SpaceAfter=No 20 130 130 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 -kDa -kDa PROPN NNP Number=Sing _ _ _ _ # sent_id = 3146 # text = NFATp protein was highly expressed in thymus and spleen. 1 NFATp NFATp ADJ JJ Degree=Pos _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 highly highly ADV RB _ _ _ _ _ 5 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 thymus thymus NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 spleen spleen NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 3147 # text = Treatment of immunoprecipitated NFATp from untreated HT-2 cells with calcineurin resulted in the dephosphorylation of NFATp, demonstrating that NFATp is an in vitro substrate for calcineurin. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 immunoprecipitated immunoprecipitate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 NFATp NFATp NOUN NN Number=Sing _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 untreated untreated ADJ JJ Degree=Pos _ _ _ _ 7 HT HT NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 13 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 dephosphorylation dephosphorylation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NFATp NFATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 demonstrating demonstrat VERB VBG VerbForm=Ger _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 27 substrate substrate NOUN NN Number=Sing _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3148 # text = NFATp immunoprecipitated from 32P-labeled HT-2 cells migrated as an approximately 120-kDa protein that was localized to the cytosol of the cells. 1 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 2 immunoprecipitated immunoprecipitate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 32P 32p PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 labeled label VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 HT Ht NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 migrated migrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 approximately approximately ADV RB _ _ _ _ _ 15 120 120 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kDa kDa NOUN NN Number=Sing _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 localized localize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3149 # text = Treatment of the cells with ionomycin resulted in a decrease in the molecular weight of NFATp and a loss of 32P, consistent with NFATp dephosphorylation. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 ionomycin ionomycin NOUN NN Number=Sing _ _ _ _ 7 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 decrease decrease NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 14 weight weight NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 loss loss NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 32 32 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 P p NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 27 dephosphorylation dephosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3150 # text = The dephosphorylation of NFATp was accompanied by localization of the protein to the nuclear fraction. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 dephosphorylation dephosphorylation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 localization localization NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 fraction fraction NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 3151 # text = Both of these events were blocked by preincubation of the cells with FK506, a calcineurin inhibitor, consistent with the hypothesis that NFATp is a calcineurin substrate in cells. 1 Both both DET DT _ _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 events event NOUN NNS Number=Plur _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 preincubation preincubation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 FK506 FK506 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 17 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 23 that that PRON WDT PronType=Rel _ _ _ _ 24 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 28 substrate substrate NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3152 # text = Document 003003398 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003398 003003398 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3153 # text = p105 and p98 precursor proteins play an active role in NF-kappa B-mediated signal transduction. 1 p105 p105 NUM CD NumType=Card _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 p98 p98 NUM CD NumType=Card _ _ _ _ 4 precursor precursor ADJ JJ Degree=Pos _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ _ 6 play play VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 active active ADJ JJ Degree=Pos _ _ _ _ 9 role role NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 signal signal NOUN NN Number=Sing _ _ _ _ 18 transduction transduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3154 # text = The Rel/NF-kappa B family of transcription factors is composed of two distinct subgroups, proteins that undergo proteolytic processing and contain SWI6/ankyrin repeats in their carboxyl termini (p105, p98), and those without such repeats that do not require processing (p65, c-Rel, RelB, and Dorsal). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Rel/ rel/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 family family NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 two two NUM CD NumType=Card _ _ _ _ 15 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 16 subgroups subgroup NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 proteins protein NOUN NNS Number=Plur _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 undergo undergo VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 proteolytic proteolytic ADJ JJ Degree=Pos _ _ _ _ 22 processing processing NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 contain contain VERB VB VerbForm=Inf _ _ _ _ 25 SWI6 SWI6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 / / PUNCT , _ _ _ _ SpaceAfter=No 27 ankyrin ankyrin ADP IN _ _ _ _ _ 28 repeats repeat NOUN NNS Number=Plur _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 31 carboxyl carboxyl NOUN NN Number=Sing _ _ _ _ 32 termini termini NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 p105 p105 NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 p98 p98 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 41 without without ADP IN _ _ _ _ _ 42 such such ADJ JJ Degree=Pos _ _ _ _ 43 repeats repeat NOUN NNS Number=Plur _ _ _ _ 44 that that PRON WDT PronType=Rel _ _ _ _ 45 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 46 not not PART RB _ _ _ _ _ 47 require require VERB VB VerbForm=Inf _ _ _ _ 48 processing processing NOUN NN Number=Sing _ _ _ _ 49 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 50 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 , , PUNCT , _ _ _ _ _ 52 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 54 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 , , PUNCT , _ _ _ _ _ 56 RelB Relb NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 , , PUNCT , _ _ _ _ _ 58 and and CCONJ CC _ _ _ _ _ 59 Dorsal Dorsal NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ _ # sent_id = 3155 # text = We demonstrate that the p105 and p98 precursors share functional properties with the I kappa B proteins, which also contain SWI6/ankyrin repeats. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 p105 p105 NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 p98 p98 NUM CD NumType=Card _ _ _ _ 8 precursors precursor NOUN NNS Number=Plur _ _ _ _ 9 share share VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 functional functional ADJ JJ Degree=Pos _ _ _ _ 11 properties property NOUN NNS Number=Plur _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 I I ADJ JJ Degree=Pos _ _ _ _ 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 also also ADV RB _ _ _ _ _ 21 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 SWI6 Swi6 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 24 ankyrin ankyrin NOUN NN Number=Sing _ _ _ _ 25 repeats repeat NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3156 # text = Both p105 and p98 were found to form stable complexes with other Rel/NF-kappa B family members, including p65 and c-Rel. 1 Both both DET DT _ _ _ _ _ 2 p105 p105 NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 p98 p98 NUM CD NumType=Card _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 form form VERB VB VerbForm=Inf _ _ _ _ 9 stable stable ADJ JJ Degree=Pos _ _ _ _ 10 complexes complexe NOUN NNS Number=Plur _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 other other ADJ JJ Degree=Pos _ _ _ _ 13 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B b ADJ JJ Degree=Pos _ _ _ _ 19 family family NOUN NN Number=Sing _ _ _ _ 20 members member NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 including include VERB VBG VerbForm=Ger _ _ _ _ 23 p65 p65 NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3157 # text = Association with the precursors is sufficient for cytoplasmic retention of either p65 or c-Rel, both of which are otherwise nuclear. 1 Association Association NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 precursors precursor NOUN NNS Number=Plur _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 9 retention retention NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 either either CCONJ CC _ _ _ _ _ 12 p65 p65 NOUN NN Number=Sing _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 both both DET DT _ _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 which which PRON WDT PronType=Rel _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 otherwise otherwise ADV RB _ _ _ _ _ 23 nuclear nuclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3158 # text = These complexes undergo stimulus-responsive processing to produce active p50/c-Rel and p55/c-Rel complexes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 complexes complexe NOUN NNS Number=Plur _ _ _ _ 3 undergo undergo ADV RB _ _ _ _ _ 4 stimulus stimulus ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 7 processing processing NOUN NN Number=Sing _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 produce produce VERB VB VerbForm=Inf _ _ _ _ 10 active active ADJ JJ Degree=Pos _ _ _ _ 11 p50/c p50/c NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 Rel Rel NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 p55/c p55/c NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 Rel Rel NOUN NN Number=Sing _ _ _ _ 18 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3159 # text = These observations suggest a second pathway leading to NF-kappa B induction, in which processing of the precursors rather than phosphorylation of I kappa B plays a major role. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 6 pathway pathway NOUN NN Number=Sing _ _ _ _ 7 leading lead VERB VBG VerbForm=Ger _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa PROPN NNP Number=Sing _ _ _ _ 12 B b PROPN NNP Number=Sing _ _ _ _ 13 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 processing processing NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 precursors precursor NOUN NNS Number=Plur _ _ _ _ 21 rather rather ADV RB _ _ _ _ _ 22 than than ADP IN _ _ _ _ _ 23 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 26 kappa kappa PROPN NNP Number=Sing _ _ _ _ 27 B B PROPN NNP Number=Sing _ _ _ _ 28 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 major major ADJ JJ Degree=Pos _ _ _ _ 31 role role NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3160 # text = Document 003003399 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003399 003003399 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3161 # text = IL-10 induces the tyrosine phosphorylation of tyk2 and Jak1 and the differential assembly of STAT1 alpha and STAT3 complexes in human T cells and monocytes. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 induces induce NOUN NNS Number=Plur _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 7 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 tyk2 tyk2 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 Jak1 Jak1 PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 differential differential ADJ JJ Degree=Pos _ _ _ _ 15 assembly assembly NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 STAT1 STAT1 NUM CD NumType=Card _ _ _ _ 18 alpha alpha NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 STAT3 STAT3 NOUN NN Number=Sing _ _ _ _ 21 complexes complexe NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 T T PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3162 # text = IL-10 affects monocytes and T cells by driving the progression of immune responsiveness such that Th2 lymphocyte-mediated effects predominate. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 affects affect NOUN NNS Number=Plur _ _ _ _ 5 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 by by SCONJ IN _ _ _ _ _ 10 driving drive VERB VBG VerbForm=Ger _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 progression progression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 immune immune ADJ JJ Degree=Pos _ _ _ _ 15 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 16 such such ADJ JJ Degree=Pos _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 Th2 Th2 NUM CD NumType=Card _ _ _ _ 19 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 effects effect NOUN NNS Number=Plur _ _ _ _ 23 predominate predominate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3163 # text = In this report, we show that in monocytes and T cells IL-10 stimulates tyrosine phosphorylation of the signal transducers and activators of transcription, STAT1 alpha and STAT3, in a differential manner such that the relative formation of homo- and heterodimers varies between the two cell types. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 T t NOUN NN Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - SYM SYM _ _ _ _ SpaceAfter=No 15 10 10 NUM CD NumType=Card _ _ _ _ 16 stimulates stimulate NOUN NNS Number=Plur _ _ _ _ 17 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 18 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 signal signal NOUN NN Number=Sing _ _ _ _ 22 transducers transducer NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 activators activator NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 STAT1 STAT1 NUM CD NumType=Card _ _ _ _ 29 alpha alpha NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 STAT3 STAT3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 differential differential ADJ JJ Degree=Pos _ _ _ _ 36 manner manner NOUN NN Number=Sing _ _ _ _ 37 such such ADJ JJ Degree=Pos _ _ _ _ 38 that that SCONJ IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 relative relative ADJ JJ Degree=Pos _ _ _ _ 41 formation formation NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 homo homo NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT , _ _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 47 varies varies NOUN NNS Number=Plur _ _ _ _ 48 between between ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 two two NUM CD NumType=Card _ _ _ _ 51 cell cell NOUN NN Number=Sing _ _ _ _ 52 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 3164 # text = Moreover, monocytes express a novel IL-10-stimulated STAT protein with an M(r) of 70 kDa that is recognized by the anti-STAT3 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 4 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 novel novel NOUN NN Number=Sing _ _ _ _ 7 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 STAT Stat NOUN NN Number=Sing _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 r be NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 70 70 NUM CD NumType=Card _ _ _ _ 22 kDa kDa PROPN NNP Number=Sing _ _ _ _ 23 that that PRON WDT PronType=Rel _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 recognized recognize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 anti-STAT3 anti-STAT3 NOUN NN Number=Sing _ _ _ _ # sent_id = 3165 # text = Ab but is not observed in T cells. 1 Ab Ab PROPN NNP Number=Sing _ _ _ _ 2 but but CCONJ CC _ _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 3166 # text = IL-10 treatment of both T cells and monocytes results in the ligand-induced tyrosine phosphorylation of tyk2 and Jak1, but not Jak2 or Jak3. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 treatment treatment NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 both both DET DT _ _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 11 results result NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 18 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 tyk2 tyk2 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 Jak1 Jak1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 but but CCONJ CC _ _ _ _ _ 25 not not ADV RB _ _ _ _ _ 26 Jak2 Jak2 NOUN NN Number=Sing _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 Jak3 Jak3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3167 # text = Selective modulation of immune responsiveness by IL-10 in cells such as monocytes and T cells may result in part from the differential activation of 1 Selective selective ADJ JJ Degree=Pos _ _ _ _ 2 modulation modulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 immune immune ADJ JJ Degree=Pos _ _ _ _ 5 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 10 10 NUM CD NumType=Card _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 such such ADJ JJ Degree=Pos _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 T t ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 may may AUX MD VerbForm=Fin _ _ _ _ 19 result result VERB VB VerbForm=Inf _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 part part NOUN NN Number=Sing _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 differential differential ADJ JJ Degree=Pos _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ # sent_id = 3168 # text = STAT protein pairs. 1 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 pairs pair NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3169 # text = Document 003003405 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003405 003003405 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3170 # text = Impaired binding of a DQ2 and DQ8-binding HSV VP16 peptide to a DQA1*0501/DQB1*0302 trans class II heterodimer. 1 Impaired Impaired VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 binding binding VERB VBG VerbForm=Ger _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 DQ2 Dq2 NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 DQ8 Dq8 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 HSV Hsv PROPN NNP Number=Sing _ _ _ _ 11 VP vp NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 16 16 NUM CD NumType=Card _ _ _ _ 13 peptide peptide NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 DQA1*0501/DQB1* DQA1*0501/DQB1* NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 0302 0302 NUM CD NumType=Card _ _ _ _ 18 trans tran NOUN NNS Number=Plur _ _ _ _ 19 class class NOUN NN Number=Sing _ _ _ _ 20 II ii NUM CD NumType=Card _ _ _ _ 21 heterodimer heterodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3171 # text = DQalpha and DQbeta trans heterodimeric HLA-DQ molecules form in individuals heterozygous for the DQ2 and DQ8 specificities. 1 DQalpha DQalpha PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 DQbeta DQbeta PROPN NNP Number=Sing _ _ _ _ 4 trans tran VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 heterodimeric heterodimeric ADJ JJ Degree=Pos _ _ _ _ 6 HLA HLa NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 DQ Dq NOUN NN Number=Sing _ _ _ _ 9 molecules molecule NOUN NNS Number=Plur _ _ _ _ 10 form from NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 individuals individual NOUN NNS Number=Plur _ _ _ _ 13 heterozygous heterozygous ADJ JJ Degree=Pos _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 DQ2 Dq2 NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 DQ8 DQ8 NOUN NN Number=Sing _ _ _ _ 19 specificities specificity NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3172 # text = Unique functions and disease associations have been postulated for such trans-dimers, which may be different from cis-encoded DQ molecules encoded by the corresponding haplotypes. 1 Unique unique ADJ JJ Degree=Pos _ _ _ _ 2 functions function NOUN NNS Number=Plur _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 disease disease NOUN NN Number=Sing _ _ _ _ 5 associations association NOUN NNS Number=Plur _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 postulated postulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 such such ADJ JJ Degree=Pos _ _ _ _ 11 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 dimers dimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 may may AUX MD VerbForm=Fin _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 different different ADJ JJ Degree=Pos _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 cis cis DET DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 21 -encoded -encod ADJ JJ Degree=Pos _ _ _ _ 22 DQ Dq NOUN NN Number=Sing _ _ _ _ 23 molecules molecule NOUN NNS Number=Plur _ _ _ _ 24 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 corresponding corresponding NOUN NN Number=Sing _ _ _ _ 28 haplotypes haplotype VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3173 # text = We analyzed the ability of the trans-dimer encoded by HLA-DQA1*0501/DQB1*0302 to bind a peptide antigen which interacts with DQ molecules encoded by both parental haplotypes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 ability ability NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 dimer dimer NOUN NN Number=Sing _ _ _ _ 10 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 DQA1*0501/DQB DQA1*0501/DQB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 1*0302 1*0302 NOUN NN Number=Sing _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 bind bind VERB VB VerbForm=Inf _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 peptide peptide NOUN NN Number=Sing _ _ _ _ 20 antigen antigen NOUN NN Number=Sing _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 interacts interact VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 DQ Dq PROPN NNP Number=Sing _ _ _ _ 25 molecules molecule NOUN NNS Number=Plur _ _ _ _ 26 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 both both DET DT _ _ _ _ _ 29 parental parental ADJ JJ Degree=Pos _ _ _ _ 30 haplotypes haplotype NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3174 # text = Markedly impaired binding was observed, consistent with both the use of different anchor residues and with changes in levels of DQ cis-dimer availability for peptide binding interactions. 1 Markedly markedly ADV RB _ _ _ _ _ 2 impaired impaire VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 binding bind VERB VBG VerbForm=Ger _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 observed observe ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 both both CCONJ CC _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 use use NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 different different ADJ JJ Degree=Pos _ _ _ _ 14 anchor anchor NOUN NN Number=Sing _ _ _ _ 15 residues residue NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 changes change NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 levels level NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 DQ Dq NOUN NN Number=Sing _ _ _ _ 23 cis-dimer cis-dimer NOUN NN Number=Sing _ _ _ _ 24 availability availability NOUN NN Number=Sing _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 peptide peptide NOUN NN Number=Sing _ _ _ _ 27 binding bind VERB VBG VerbForm=Ger _ _ _ _ 28 interactions interaction NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3175 # text = Document 003003411 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003411 003003411 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3176 # text = Constitutive overexpression of the L-selectin gene in fresh leukemic cells of adult T-cell leukemia that can be transactivated by human T-cell lymphotropic virus type 1 Tax. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 L- L- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 selectin selectin NOUN NN Number=Sing _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 fresh fresh ADJ JJ Degree=Pos _ _ _ _ 10 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 adult adult NOUN NN Number=Sing _ _ _ _ 14 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 can can AUX MD VerbForm=Fin _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 transactivated transactivate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 lymphotropic lymphotropic NOUN NN Number=Sing _ _ _ _ 26 virus virus NOUN NN Number=Sing _ _ _ _ 27 type type NOUN NN Number=Sing _ _ _ _ 28 1 1 NUM CD NumType=Card _ _ _ _ 29 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3177 # text = L-selectin is an adhesion molecule of the selectin family that mediates the initial step of leukocyte adhesion to vascular endothelium. 1 L- L- SYM NFP _ _ _ _ SpaceAfter=No 2 selectin selectin NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 6 molecule molecule NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 selectin selectin ADJ JJ Degree=Pos _ _ _ _ 10 family family NOUN NN Number=Sing _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 initial initial ADJ JJ Degree=Pos _ _ _ _ 15 step step NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 18 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 21 endothelium endothelium NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3178 # text = Upon cellular activation, expression of the L-selectin gene is downregulated at both the protein and mRNA levels. 1 Upon upon ADP IN _ _ _ _ _ 2 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 L- l- NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 selectin selectin NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 downregulated downregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 at at ADP IN _ _ _ _ _ 14 both both CCONJ CC _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 19 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3179 # text = To understand the mechanism of leukemic cell infiltration into organs, we studied the expression and regulation of L-selectin mRNA in fresh leukemic cells of adult T-cell leukemia (ATL) patients and investigated the response of the L-selectin promoter to human T-cell lymphotropic virus type 1 (HTLV-1) Tax, which is a viral transcriptional transactivator. 1 To to PART TO _ _ _ _ _ 2 understand understand VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 infiltration infiltration NOUN NN Number=Sing _ _ _ _ 9 into into ADP IN _ _ _ _ _ 10 organs organ NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 13 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 regulation regulation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 L- L- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 selectin selectin NOUN NN Number=Sing _ _ _ _ 21 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 fresh fresh ADJ JJ Degree=Pos _ _ _ _ 24 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 adult adult NOUN NN Number=Sing _ _ _ _ 28 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 ATL ATL INTJ UH _ _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 patients patient NOUN NNS Number=Plur _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 response response NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 L- l- NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 selectin selectin NOUN NN Number=Sing _ _ _ _ 43 promoter promoter NOUN NN Number=Sing _ _ _ _ 44 to to ADP IN _ _ _ _ _ 45 human human ADJ JJ Degree=Pos _ _ _ _ 46 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 cell cell NOUN NN Number=Sing _ _ _ _ 48 lymphotropic lymphotropic NOUN NN Number=Sing _ _ _ _ 49 virus virus NOUN NN Number=Sing _ _ _ _ 50 type type NOUN NN Number=Sing _ _ _ _ 51 1 1 NUM CD NumType=Card _ _ _ _ 52 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 53 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 56 ) ) PUNCT -RRB- _ _ _ _ _ 57 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 , , PUNCT , _ _ _ _ _ 59 which which PRON WDT PronType=Rel _ _ _ _ 60 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 61 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 62 viral viral ADJ JJ Degree=Pos _ _ _ _ 63 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 64 transactivator transactivator NOUN NN Number=Sing _ _ _ SpaceAfter=No 65 . . PUNCT . _ _ _ _ _ # sent_id = 3180 # text = Flow cytometry showed that L-selectin was expressed on fresh ATL cells along with other activation antigens. 1 Flow Flow ADJ JJ Degree=Pos _ _ _ _ 2 cytometry cytometry NOUN NN Number=Sing _ _ _ _ 3 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 L- L- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 selectin selectin NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 fresh fresh ADJ JJ Degree=Pos _ _ _ _ 11 ATL Atl ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 along along ADP IN _ _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 other other ADJ JJ Degree=Pos _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 antigens antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3181 # text = Northern blot analysis showed that ATL cells overexpressed that L-selectin mRNA and that the level was aberrantly upregulated after PMA stimulation. 1 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 ATL Atl PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 overexpressed overexpress VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 L- L- SYM NFP _ _ _ _ SpaceAfter=No 11 selectin selectin NOUN NN Number=Sing _ _ _ _ 12 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 level level NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 aberrantly aberrantly ADV RB _ _ _ _ _ 19 upregulated upregulated VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 after after ADP IN _ _ _ _ _ 21 PMA Pma DET DT Definite=Ind|PronType=Art _ _ _ _ 22 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3182 # text = Studies using in situ hybridization showed expression of the L-selectin mRNA in the infiltrating leukemic cells in the liver of two ATL patients. 1 Studies study NOUN NNS Number=Plur _ _ _ _ 2 using use VERB VBG VerbForm=Ger _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 situ situ NOUN NN Number=Sing _ _ _ _ 5 hybridization hybridization NOUN NN Number=Sing _ _ _ _ 6 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 L- l- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 selectin selectin VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 infiltrating infiltrating ADJ JJ Degree=Pos _ _ _ _ 16 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 liver liver NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 two two NUM CD NumType=Card _ _ _ _ 23 ATL Atl ADJ JJ Degree=Pos _ _ _ _ 24 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3183 # text = Intravenous injection of a rat T-cell line that overexpresses L-selectin showed increased organ infiltration. 1 Intravenous Intravenous ADJ JJ Degree=Pos _ _ _ _ 2 injection injection NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 rat rat NOUN NN Number=Sing _ _ _ _ 6 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 line line NOUN NN Number=Sing _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 overexpresses overexpress VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 L- L- X GW _ _ _ _ SpaceAfter=No 12 selectin selectin NOUN NN Number=Sing _ _ _ _ 13 showed showed VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 organ organ ADJ JJ Degree=Pos _ _ _ _ 16 infiltration infiltration NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3184 # text = The induction of Tax expression in JPX9 cells resulted in about a twofold increase in the mRNA expression levels compared with the basal level. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Tax tax NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 JPX9 JPX9 PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 about about ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 twofold twofold NOUN NN Number=Sing _ _ _ _ 14 increase increase NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 levels level NOUN NNS Number=Plur _ _ _ _ 20 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 basal basal ADJ JJ Degree=Pos _ _ _ _ 24 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3185 # text = Chloramphenicol acetyltransferase (CAT) assay after transient cotransfection showed about a fivefold transactivation of the L-selectin promoter by Tax. 1 Chloramphenicol Chloramphenicol PROPN NNP Number=Sing _ _ _ _ 2 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 CAT Cat NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 assay assay NOUN NN Number=Sing _ _ _ _ 7 after after ADP IN _ _ _ _ _ 8 transient transient ADJ JJ Degree=Pos _ _ _ _ 9 cotransfection cotransfection NOUN NN Number=Sing _ _ _ _ 10 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 about about ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 fivefold fivefold NOUN NN Number=Sing _ _ _ _ 14 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 L- l- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 selectin selectin NOUN NN Number=Sing _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 Tax tax PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3186 # text = The serum level of the shed form of L-selectin was significantly increased in ATL patients (mean +/- SD, 4,215.4 +/- 4,111 ng/mL) compared with those of asymptomatic carriers and healthy blood donors (mean +/- SD, 1,148.0 +/- 269.0 ng/mL and 991.9 +/- 224 ng/mL, respectively). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 serum serum NOUN NN Number=Sing _ _ _ _ 3 level level NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 shed shed ADJ JJ Degree=Pos _ _ _ _ 7 form form NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 L- L- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 selectin selectin NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 significantly significantly ADV RB _ _ _ _ _ 13 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 ATL Atl PROPN NNP Number=Sing _ _ _ _ 16 patients patient NOUN NNS Number=Plur _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 mean mean X GW _ _ _ _ _ 19 +/- +/- X GW _ _ _ _ _ 20 SD sd NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 4,215.4 4,215.4 NUM CD NumType=Card _ _ _ _ 23 +/- +/- SYM SYM _ _ _ _ _ 24 4,111 4,111 NUM CD NumType=Card _ _ _ _ 25 ng ng NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 / / PUNCT , _ _ _ _ SpaceAfter=No 27 mL mL NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 asymptomatic asymptomatic ADJ JJ Degree=Pos _ _ _ _ 34 carriers carrier NOUN NNS Number=Plur _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 37 blood blood NOUN NN Number=Sing _ _ _ _ 38 donors donor NOUN NNS Number=Plur _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 mean mean X GW _ _ _ _ _ 41 +/- +/- X GW _ _ _ _ _ 42 SD SD NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 1,148.0 1,148.0 NUM CD NumType=Card _ _ _ _ 45 +/- +/- SYM SYM _ _ _ _ _ 46 269.0 269.0 NUM CD NumType=Card _ _ _ _ 47 ng/mL ng/mL NOUN NN Number=Sing _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 991.9 991.9 NUM CD NumType=Card _ _ _ _ 50 +/- +/- SYM SYM _ _ _ _ _ 51 224 224 NUM CD NumType=Card _ _ _ _ 52 ng ng NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 / / PUNCT , _ _ _ _ SpaceAfter=No 54 mL mL NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 , , PUNCT , _ _ _ _ _ 56 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 57 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 3187 # text = These results indicated that ATL cells constitutively overexpress the L-selectin gene that can be transactivated by HTLV-1 Tax. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 ATL Atl ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 constitutively constitutively ADV RB _ _ _ _ _ 8 overexpress overexpress VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 L- l- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 selectin selectin NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 can can AUX MD VerbForm=Fin _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 transactivated transactivate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3188 # text = The overexpression of L-selectin, as well as of inflammatory cytokines, by ATL cells may provide a basis for ATL cells to attach the vascular endothelium, leading to transmigration and organ infitration. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 L- L- NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 selectin selectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 as as ADV RB _ _ _ _ _ 8 well well ADV RB Degree=Pos _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 12 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 ATL Atl ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 may may AUX MD VerbForm=Fin _ _ _ _ 18 provide provide VERB VB VerbForm=Inf _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 basis basis NOUN NN Number=Sing _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 ATL Atl ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 attach attach VERB VB VerbForm=Inf _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 28 endothelium endothelium NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 leading lead VERB VBG VerbForm=Ger _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 transmigration transmigration NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 organ organ ADJ JJ Degree=Pos _ _ _ _ 35 infitration infitration NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3189 # text = Document 003003414 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003414 003003414 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3190 # text = Nonopsonic phagocytosis of Pseudomonas aeruginosa by macrophages and polymorphonuclear leukocytes requires the presence of the bacterial flagellum. 1 Nonopsonic Nonopsonic ADJ JJ Degree=Pos _ _ _ _ 2 phagocytosis phagocytosis NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Pseudomonas Pseudomonas PROPN NNP Number=Sing _ _ _ _ 5 aeruginosa aeruginosa NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 polymorphonuclear polymorphonuclear ADJ JJ Degree=Pos _ _ _ _ 10 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 11 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 presence presence NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 17 flagellum flagellum NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3191 # text = Whereas the mechanism of nonopsonic phagocytosis of Pseudomonas aeruginosa has been described, the bacterial ligands required are poorly understood. 1 Whereas whereas SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 nonopsonic nonopsonic ADJ JJ Degree=Pos _ _ _ _ 6 phagocytosis phagocytosis NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Pseudomonas Pseudomonas PROPN NNP Number=Sing _ _ _ _ 9 aeruginosa aeruginosa PROPN NNP Number=Sing _ _ _ _ 10 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 12 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 16 ligands ligand NOUN NNS Number=Plur _ _ _ _ 17 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 poorly poorly ADV RB _ _ _ _ _ 20 understood understand VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3192 # text = To identify the requisite bacterial ligands, studies with isogenic mutants of P. aeruginosa PAK lacking pili, flagella, and the RpoN sigma factor were undertaken. 1 To to PART TO _ _ _ _ _ 2 identify identify VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 requisite requisite NOUN NN Number=Sing _ _ _ _ 5 bacterial bacterial NOUN NN Number=Sing _ _ _ _ 6 ligands ligand NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 studies study NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 isogenic isogenic ADJ JJ Degree=Pos _ _ _ _ 11 mutants mutant NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 P. P. NOUN NN Number=Sing _ _ _ _ 14 aeruginosa aeruginosa NOUN NN Number=Sing _ _ _ _ 15 PAK Pak NOUN NN Number=Sing _ _ _ _ 16 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 17 pili pili NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 flagella flagella NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 RpoN RpoN ADJ JJ Degree=Pos _ _ _ _ 24 sigma sigma NOUN NN Number=Sing _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 undertaken undertaken ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3193 # text = The RpoN mutant, lacking pili, flagella, and nonpilus adhesins, bound poorly and was resistant to ingestion by both macrophages and neutrophils. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 RpoN RpoN PROPN NNP Number=Sing _ _ _ _ 3 mutant mutant NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 6 pili pili NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 flagella flagella NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 nonpilus nonpilus ADJ JJ Degree=Pos _ _ _ _ 12 adhesins adhesin NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 bound bound ADJ JJ Degree=Pos _ _ _ _ 15 poorly poorly ADV RB _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 ingestion ingestion VERB VB VerbForm=Inf _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 both both DET DT _ _ _ _ _ 23 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3194 # text = Pili were not absolutely required for binding or phagocytosis of P. 1 Pili Pili NOUN NN Number=Sing _ _ _ _ 2 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 not not PART RB _ _ _ _ _ 4 absolutely absolutely ADV RB _ _ _ _ _ 5 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 for for SCONJ IN _ _ _ _ _ 7 binding binding VERB VBG VerbForm=Ger _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 phagocytosis phagocytosis NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 P. P. PROPN NNP Number=Sing _ _ _ _ # sent_id = 3195 # text = aeruginosa. 1 aeruginosa aeruginosa INTJ UH _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ # sent_id = 3196 # text = The presence of a flagellum was not required for binding of P. aeruginosa to macrophages but was critical for the subsequent internalization of the bacterium, suggesting that this factor or a surface ligand associated with its assembly was responsible for stimulation of nonopsonic phagocytosis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 presence presence NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 flagellum flagellum NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 for for SCONJ IN _ _ _ _ _ 10 binding bind VERB VBG VerbForm=Ger _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 P. P. NOUN NN Number=Sing _ _ _ _ 13 aeruginosa aeruginosa NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 critical critical ADJ JJ Degree=Pos _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 22 internalization internalization NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 bacterium bacterium NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 28 that that SCONJ IN _ _ _ _ _ 29 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ _ 31 or or CCONJ CC _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 surface surface NOUN NN Number=Sing _ _ _ _ 34 ligand ligand NOUN NN Number=Sing _ _ _ _ 35 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 38 assembly assembly NOUN NN Number=Sing _ _ _ _ 39 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 40 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 41 for for ADP IN _ _ _ _ _ 42 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 nonopsonic nonopsonic ADJ JJ Degree=Pos _ _ _ _ 45 phagocytosis phagocytosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3197 # text = Document 003003415 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003415 003003415 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3198 # text = Synergistic interactions between overlapping binding sites for the serum response factor and ELK-1 proteins mediate both basal enhancement and phorbol ester responsiveness of primate cytomegalovirus major immediate-early promoters in monocyte and T-lymphocyte cell types. 1 Synergistic Synergistic ADJ JJ Degree=Pos _ _ _ _ 2 interactions interaction NOUN NNS Number=Plur _ _ _ _ 3 between between ADP IN _ _ _ _ _ 4 overlapping overlapp NOUN NN Number=Sing _ _ _ _ 5 binding bind VERB VBG VerbForm=Ger _ _ _ _ 6 sites site NOUN NNS Number=Plur _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 serum serum NOUN NN Number=Sing _ _ _ _ 10 response response NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 ELK elk NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 proteins protein NOUN NNS Number=Plur _ _ _ _ 17 mediate mediate ADJ JJ Degree=Pos _ _ _ _ 18 both both CCONJ CC _ _ _ _ _ 19 basal basal ADJ JJ Degree=Pos _ _ _ _ 20 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 23 ester ester NOUN NN Number=Sing _ _ _ _ 24 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 primate primate ADJ JJ Degree=Pos _ _ _ _ 27 cytomegalovirus cytomegalovirus NOUN NN Number=Sing _ _ _ _ 28 major major ADJ JJ Degree=Pos _ _ _ _ 29 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 early early ADJ JJ Degree=Pos _ _ _ _ 32 promoters promoter NOUN NNS Number=Plur _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3199 # text = Cytomegalovirus (CMV) infection is nonpermissive or persistent in many lymphoid and myeloid cell types but can be activated in differentiated macrophages. 1 Cytomegalovirus Cytomegalovirus PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 CMV CMV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 infection infection NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 nonpermissive nonpermissive ADJ JJ Degree=Pos _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 persistent persistent ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 many many ADJ JJ Degree=Pos _ _ _ _ 12 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 types type NOUN NNS Number=Plur _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 can can AUX MD VerbForm=Fin _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3200 # text = We have shown elsewhere that both the major immediate-early gene (MIE) and lytic cycle infectious progeny virus expression can be induced in otherwise nonpermissive monocyte-like U-937 cell cultures infected with either human CMV (HCMV) or simian CMV (SCMV) by treatment with the phorbol ester 12-O-tetradecanoylphorbol-13-acetate (TPA). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 elsewhere elsewhere ADV RB PronType=Dem _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 both both CCONJ CC _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 major major ADJ JJ Degree=Pos _ _ _ _ 9 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 early early ADJ JJ Degree=Pos _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 MIE MIE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 18 cycle cycle NOUN NN Number=Sing _ _ _ _ 19 infectious infectious ADJ JJ Degree=Pos _ _ _ _ 20 progeny progeny NOUN NN Number=Sing _ _ _ _ 21 virus virus NOUN NN Number=Sing _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 can can AUX MD VerbForm=Fin _ _ _ _ 24 be be AUX VB VerbForm=Inf _ _ _ _ 25 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 otherwise otherwise ADV RB _ _ _ _ _ 28 nonpermissive nonpermissive ADJ JJ Degree=Pos _ _ _ _ 29 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 -like -like ADP IN _ _ _ _ _ 31 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 937 937 NUM CD NumType=Card _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 cultures culture NOUN NNS Number=Plur _ _ _ _ 36 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 either either DET DT _ _ _ _ _ 39 human human ADJ JJ Degree=Pos _ _ _ _ 40 CMV Cmv PROPN NNP Number=Sing _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 HCMV HCMV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ _ 44 or or CCONJ CC _ _ _ _ _ 45 simian simian ADJ JJ Degree=Pos _ _ _ _ 46 CMV CMV PROPN NNP Number=Sing _ _ _ _ 47 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 48 SCMV SCMV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 ) ) PUNCT -RRB- _ _ _ _ _ 50 by by ADP IN _ _ _ _ _ 51 treatment treatment NOUN NN Number=Sing _ _ _ _ 52 with with ADP IN _ _ _ _ _ 53 the the DET DT Definite=Def|PronType=Art _ _ _ _ 54 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 55 ester ester NOUN NN Number=Sing _ _ _ _ 56 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 57 - - PUNCT , _ _ _ _ SpaceAfter=No 58 O of ADP IN Abbr=Yes _ _ _ SpaceAfter=No 59 -tetradecanoylphorbol -tetradecanoylphorbol ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 60 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 61 -acetate -acetate NOUN NN Number=Sing _ _ _ _ 62 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 63 TPA TPA NOUN NN Number=Sing _ _ _ SpaceAfter=No 64 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 65 . . PUNCT . _ _ _ _ _ # sent_id = 3201 # text = Two multicopy basal enhancer motifs within the SCMV MIE enhancer, namely, 11 copies of the 16-bp cyclic AMP response element (CRE) and 3 copies of novel 17-bp serum response factor (SRF) binding sites referred to as the SNE (SRF/NFkappaB-like element), as well as four classical NFkappaB sites within the HCMV version, contribute to TPA responsiveness in transient assays in monocyte and T-cell types. 1 Two two NUM CD NumType=Card _ _ _ _ 2 multicopy multicopy ADJ JJ Degree=Pos _ _ _ _ 3 basal basal ADJ JJ Degree=Pos _ _ _ _ 4 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 5 motifs motif NOUN NNS Number=Plur _ _ _ _ 6 within within ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 SCMV SCMV PROPN NNP Number=Sing _ _ _ _ 9 MIE MIE PROPN NNP Number=Sing _ _ _ _ 10 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 namely namely ADV RB _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 11 11 NUM CD NumType=Card _ _ _ _ 15 copies copy NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 16 16 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 bp bp NOUN NN Number=Sing _ _ _ _ 21 cyclic cyclic NOUN NN Number=Sing _ _ _ _ 22 AMP Amp SYM NFP _ _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ _ 24 element element NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 CRE CRE NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 3 3 NUM CD NumType=Card _ _ _ _ 30 copies copy NOUN NNS Number=Plur _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 novel novel NOUN NN Number=Sing _ _ _ _ 33 17 17 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 - - PUNCT : _ _ _ _ SpaceAfter=No 35 bp bp NOUN NN Number=Sing _ _ _ _ 36 serum serum NOUN NN Number=Sing _ _ _ _ 37 response response NOUN NN Number=Sing _ _ _ _ 38 factor factor NOUN NN Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 SRF SRF NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 binding bind VERB VBG VerbForm=Ger _ _ _ _ 43 sites site NOUN NNS Number=Plur _ _ _ _ 44 referred refer VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 to to ADP IN _ _ _ _ _ 46 as as ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 SNE SNE PROPN NNP Number=Sing _ _ _ _ 49 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 50 SRF SRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 52 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 54 like like ADJ JJ Degree=Pos _ _ _ _ 55 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 57 , , PUNCT , _ _ _ _ _ 58 as as ADV RB _ _ _ _ _ 59 well well ADV RB Degree=Pos _ _ _ _ 60 as as ADP IN _ _ _ _ _ 61 four four NUM CD NumType=Card _ _ _ _ 62 classical classical ADJ JJ Degree=Pos _ _ _ _ 63 NFkappaB Nfkappab NOUN NN Number=Sing _ _ _ _ 64 sites site NOUN NNS Number=Plur _ _ _ _ 65 within within ADP IN _ _ _ _ _ 66 the the DET DT Definite=Def|PronType=Art _ _ _ _ 67 HCMV HCMV PROPN NNP Number=Sing _ _ _ _ 68 version version NOUN NN Number=Sing _ _ _ SpaceAfter=No 69 , , PUNCT , _ _ _ _ _ 70 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 71 to to ADP IN _ _ _ _ _ 72 TPA TPA DET DT Definite=Ind|PronType=Art _ _ _ _ 73 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 74 in in ADP IN _ _ _ _ _ 75 transient transient ADJ JJ Degree=Pos _ _ _ _ 76 assays assay NOUN NNS Number=Plur _ _ _ _ 77 in in ADP IN _ _ _ _ _ 78 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 79 and and CCONJ CC _ _ _ _ _ 80 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 81 cell cell NOUN NN Number=Sing _ _ _ _ 82 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 83 . . PUNCT . _ _ _ _ _ # sent_id = 3202 # text = The SCMV SNE sites contain potential overlapping core recognition binding motifs for SRF, Rel/NFkappaB, ETS, and YY1 class transcription factors but fail to respond to either serum or tumor necrosis factor alpha. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 SCMV SCMV PROPN NNP Number=Sing _ _ _ _ 3 SNE SNE PROPN NNP Number=Sing _ _ _ _ 4 sites site NOUN NNS Number=Plur _ _ _ _ 5 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 potential potential ADJ JJ Degree=Pos _ _ _ _ 7 overlapping overlapp NOUN NN Number=Sing _ _ _ _ 8 core core NOUN NN Number=Sing _ _ _ _ 9 recognition recognition NOUN NN Number=Sing _ _ _ _ 10 binding bind VERB VBG VerbForm=Ger _ _ _ _ 11 motifs motif NOUN NNS Number=Plur _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 SRF SRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 Rel/ Rel/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 16 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 ETS Ets PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 YY1 YY1 NUM CD NumType=Card _ _ _ _ 22 class class NOUN NN Number=Sing _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factors factor NOUN NNS Number=Plur _ _ _ _ 25 but but CCONJ CC _ _ _ _ _ 26 fail fail VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 respond respond VERB VB VerbForm=Inf _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 either either CCONJ CC _ _ _ _ _ 31 serum serum NOUN NN Number=Sing _ _ _ _ 32 or or CCONJ CC _ _ _ _ _ 33 tumor tumor NOUN NN Number=Sing _ _ _ _ 34 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ _ 36 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3203 # text = Therefore, to evaluate the mechanism of TPA responsiveness of the SNE motifs and of a related 16-bp SEE (SRF/ETS element) motif found in the HCMV and chimpanzee CMV MIE enhancers, we have examined the functional responses and protein binding properties of multimerized wild-type and mutant elements added upstream to the SCMV MIE or simian virus 40 minimal promoter regions in the U-937, K-562, HL-60, THP-1, and Jurkat cell lines. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 evaluate evaluate VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 TPA TPa DET DT Definite=Ind|PronType=Art _ _ _ _ 9 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 SNE Sne ADJ JJ Degree=Pos _ _ _ _ 13 motifs motif NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 related relate ADJ JJ Degree=Pos _ _ _ _ 18 16 16 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 bp bp NOUN NN Number=Sing _ _ _ _ 21 SEE See NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 SRF SRF NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 / / PUNCT , _ _ _ _ SpaceAfter=No 25 ETS Ets NOUN NN Number=Sing _ _ _ _ 26 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 motif motif NOUN NN Number=Sing _ _ _ _ 29 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 HCMV HCMV PROPN NNP Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 chimpanzee chimpanzee PROPN NNP Number=Sing _ _ _ _ 35 CMV CMV PROPN NNP Number=Sing _ _ _ _ 36 MIE MIE PROPN NNP Number=Sing _ _ _ _ 37 enhancers enhancer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 40 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 41 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 functional functional ADJ JJ Degree=Pos _ _ _ _ 44 responses response NOUN NNS Number=Plur _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 protein protein VERB VB VerbForm=Inf _ _ _ _ 47 binding bind VERB VBG VerbForm=Ger _ _ _ _ 48 properties property NOUN NNS Number=Plur _ _ _ _ 49 of of ADP IN _ _ _ _ _ 50 multimerized multimerize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 51 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 type type NOUN NN Number=Sing _ _ _ _ 54 and and CCONJ CC _ _ _ _ _ 55 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 56 elements element NOUN NNS Number=Plur _ _ _ _ 57 added add VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 58 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 59 to to ADP IN _ _ _ _ _ 60 the the DET DT Definite=Def|PronType=Art _ _ _ _ 61 SCMV SCMV PROPN NNP Number=Sing _ _ _ _ 62 MIE MIE PROPN NNP Number=Sing _ _ _ _ 63 or or CCONJ CC _ _ _ _ _ 64 simian simian ADJ JJ Degree=Pos _ _ _ _ 65 virus virus NOUN NN Number=Sing _ _ _ _ 66 40 40 NUM CD NumType=Card _ _ _ _ 67 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 68 promoter promoter NOUN NN Number=Sing _ _ _ _ 69 regions region NOUN NNS Number=Plur _ _ _ _ 70 in in ADP IN _ _ _ _ _ 71 the the DET DT Definite=Def|PronType=Art _ _ _ _ 72 U- u- NOUN NN Number=Sing _ _ _ SpaceAfter=No 73 937 937 NUM CD NumType=Card _ _ _ SpaceAfter=No 74 , , PUNCT , _ _ _ _ _ 75 K k NUM CD NumType=Card _ _ _ SpaceAfter=No 76 - - SYM SYM _ _ _ _ SpaceAfter=No 77 562 562 NUM CD NumType=Card _ _ _ SpaceAfter=No 78 , , PUNCT , _ _ _ _ _ 79 HL HL NOUN NN Number=Sing _ _ _ SpaceAfter=No 80 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 81 60 60 NUM CD NumType=Card _ _ _ SpaceAfter=No 82 , , PUNCT , _ _ _ _ _ 83 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 84 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 85 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 86 , , PUNCT , _ _ _ _ _ 87 and and CCONJ CC _ _ _ _ _ 88 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 89 cell cell NOUN NN Number=Sing _ _ _ _ 90 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 91 . . PUNCT . _ _ _ _ _ # sent_id = 3204 # text = Unlike classical NFkappaB sites, neither the SNE nor the SEE motif responded to phosphatase inhibition by okadaic acid. 1 Unlike unlike ADP IN _ _ _ _ _ 2 classical classical ADJ JJ Degree=Pos _ _ _ _ 3 NFkappaB Nfkappab NOUN NN Number=Sing _ _ _ _ 4 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 neither neither CCONJ CC _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 SNE Sne NOUN NN Number=Sing _ _ _ _ 9 nor nor CCONJ CC _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 SEE see ADJ JJ Degree=Pos _ _ _ _ 12 motif motif NOUN NN Number=Sing _ _ _ _ 13 responded respond VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 phosphatase phosphatase VERB VB VerbForm=Inf _ _ _ _ 16 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 19 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3205 # text = However, the TPA responsiveness of both CMV elements proved to involve synergistic interactions between the core SRF binding site (CCATATATGG) and the adjacent inverted ETS binding motifs (TTCC), which correlated directly with formation of a bound tripartite complex containing both the cellular SRF and ELK-1 proteins. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 TPA TPA PROPN NNP Number=Sing _ _ _ _ 5 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 both both DET DT _ _ _ _ _ 8 CMV CMV PROPN NNP Number=Sing _ _ _ _ 9 elements element NOUN NNS Number=Plur _ _ _ _ 10 proved prove VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 involve involve VERB VB VerbForm=Inf _ _ _ _ 13 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 14 interactions interaction NOUN NNS Number=Plur _ _ _ _ 15 between between ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 core core NOUN NN Number=Sing _ _ _ _ 18 SRF Srf SCONJ IN _ _ _ _ _ 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 site site NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 CCATATATGG CCATATATGG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 27 inverted invert VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 ETS ets NOUN NNS Number=Plur _ _ _ _ 29 binding binding VERB VBG VerbForm=Ger _ _ _ _ 30 motifs motif NOUN NNS Number=Plur _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 TTCC TTCC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 which which PRON WDT PronType=Rel _ _ _ _ 36 correlated correlate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 37 directly directly ADV RB _ _ _ _ _ 38 with with ADP IN _ _ _ _ _ 39 formation formation NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 bound bound ADJ JJ Degree=Pos _ _ _ _ 43 tripartite tripartite ADJ JJ Degree=Pos _ _ _ _ 44 complex complex NOUN NN Number=Sing _ _ _ _ 45 containing contain VERB VBG VerbForm=Ger _ _ _ _ 46 both both CCONJ CC _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 49 SRF SRF PROPN NNP Number=Sing _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 ELK elk PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT , _ _ _ _ SpaceAfter=No 53 1 1 NUM CD NumType=Card _ _ _ _ 54 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 3206 # text = This protein complex was more abundant in U-937, K-562, and HeLa cell extracts than in Raji, HF, BALB/c 3T3, or HL-60 cells, but the binding activity was altered only twofold after TPA treatment. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 complex complex NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 more more ADV RBR _ _ _ _ _ 6 abundant abundant ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 937 937 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 K k NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - SYM SYM _ _ _ _ SpaceAfter=No 14 562 562 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 18 cell cell PROPN NNP Number=Sing _ _ _ _ 19 extracts extract VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 than than ADP IN _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 Raji Raji PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 HF HF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 BALB BALB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 / / PUNCT , _ _ _ _ SpaceAfter=No 28 c c NOUN NN Number=Sing _ _ _ _ 29 3T3 3T3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 or or CCONJ CC _ _ _ _ _ 32 HL HL NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 60 60 NUM CD NumType=Card _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 but but CCONJ CC _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 binding binding VERB VBG VerbForm=Ger _ _ _ _ 40 activity activity NOUN NN Number=Sing _ _ _ _ 41 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 42 altered alter VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 43 only only ADV RB _ _ _ _ _ 44 twofold twofold VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 45 after after ADP IN _ _ _ _ _ 46 TPA TPa DET DT Definite=Ind|PronType=Art _ _ _ _ 47 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 3207 # text = A 40-fold stimulation of chloramphenicol acetyltransferase activity mediated by four tandem repeats of the SNE could be induced within 2 h (and up to 250-fold within 6 h) after addition of TPA in DNA-transfected U-937 cells, indicating that the stimulation appeared likely to be a true protein kinase C-mediated signal transduction event rather than a differentiation response. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 fold fold NOUN NN Number=Sing _ _ _ _ 5 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 8 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 four four NUM CD NumType=Card _ _ _ _ 13 tandem tandem NOUN NN Number=Sing _ _ _ _ 14 repeats repeat NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 SNE Sne PROPN NNP Number=Sing _ _ _ _ 18 could could AUX MD VerbForm=Fin _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 within within ADP IN _ _ _ _ _ 22 2 2 NUM CD NumType=Card _ _ _ _ 23 h h NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 and and CCONJ CC _ _ _ _ _ 26 up up ADV RB _ _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 250 250 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 fold fold NOUN NN Number=Sing _ _ _ _ 31 within within ADP IN _ _ _ _ _ 32 6 6 NUM CD NumType=Card _ _ _ _ 33 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 after after ADP IN _ _ _ _ _ 36 addition addition NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 TPA TPA PROPN NNP Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 DNA Dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT , _ _ _ _ SpaceAfter=No 42 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - SYM SYM _ _ _ _ SpaceAfter=No 45 937 937 NUM CD NumType=Card _ _ _ _ 46 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 49 that that SCONJ IN _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 52 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 53 likely likely ADV RB _ _ _ _ _ 54 to to PART TO _ _ _ _ _ 55 be be AUX VB VerbForm=Inf _ _ _ _ 56 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 57 true true ADJ JJ Degree=Pos _ _ _ _ 58 protein protein NOUN NN Number=Sing _ _ _ _ 59 kinase kinase NOUN NN Number=Sing _ _ _ _ 60 C- C- PUNCT : _ _ _ _ SpaceAfter=No 61 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 62 signal signal NOUN NN Number=Sing _ _ _ _ 63 transduction transduction NOUN NN Number=Sing _ _ _ _ 64 event event NOUN NN Number=Sing _ _ _ _ 65 rather rather ADV RB _ _ _ _ _ 66 than than ADP IN _ _ _ _ _ 67 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 68 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 69 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 70 . . PUNCT . _ _ _ _ _ # sent_id = 3208 # text = Slight differences in the sequence of the core SRF binding site compared with that of the classical c-Fos promoter serum response element, together with differences in the spacing between the SRF and ETS motifs, appear to account for the inability of the SCMV SNEs to respond to serum induction. 1 Slight slight ADJ JJ Degree=Pos _ _ _ _ 2 differences difference NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 sequence sequence NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 core core NOUN NN Number=Sing _ _ _ _ 9 SRF SRF SCONJ IN _ _ _ _ _ 10 binding bind VERB VBG VerbForm=Ger _ _ _ _ 11 site site NOUN NN Number=Sing _ _ _ _ 12 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 classical classical ADJ JJ Degree=Pos _ _ _ _ 18 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 Fos Fos PROPN NNP Number=Sing _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 serum serum NOUN NN Number=Sing _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ _ 24 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 together together ADV RB _ _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 differences difference NOUN NNS Number=Plur _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 spacing spacing NOUN NN Number=Sing _ _ _ _ 32 between between ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 SRF Srf NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 ETS ets NOUN NN Number=Sing _ _ _ _ 37 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 appear appear VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 40 to to PART TO _ _ _ _ _ 41 account account VERB VB VerbForm=Inf _ _ _ _ 42 for for ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 inability inability NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 SCMV SCMV PROPN NNP Number=Sing _ _ _ _ 48 SNEs SNEs PROPN NNP Number=Sing _ _ _ _ 49 to to PART TO _ _ _ _ _ 50 respond respond VERB VB VerbForm=Inf _ _ _ _ 51 to to ADP IN _ _ _ _ _ 52 serum serum NOUN NN Number=Sing _ _ _ _ 53 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3209 # text = Document 003003417 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003417 003003417 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3210 # text = Human T-cell leukemia virus type I Tax associates with and is negatively regulated by the NF-kappa B2 p100 gene product: implications for viral latency. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 type type NOUN NN Number=Sing _ _ _ _ 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 8 Tax tax PROPN NNP Number=Sing _ _ _ _ 9 associates associate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 negatively negatively ADV RB _ _ _ _ _ 14 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B2 b2 NUM CD NumType=Card _ _ _ _ 21 p100 p100 NUM CD NumType=Card _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 product product NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 : : PUNCT : _ _ _ _ _ 25 implications implication NOUN NNS Number=Plur _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 viral viral ADJ JJ Degree=Pos _ _ _ _ 28 latency latency NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3211 # text = Human T-cell leukemia virus type I (HTLV-I) is the etiologic agent of the adult T-cell leukemia, an aggressive and often fatal malignancy of activated human CD4 T cells. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 type type NOUN NN Number=Sing _ _ _ _ 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 etiologic etiologic ADJ JJ Degree=Pos _ _ _ _ 16 agent agent NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 adult adult NOUN NN Number=Sing _ _ _ _ 20 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 aggressive aggressive ADJ JJ Degree=Pos _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 often often ADV RB _ _ _ _ _ 28 fatal fatal ADJ JJ Degree=Pos _ _ _ _ 29 malignancy malignancy NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 human human ADJ JJ Degree=Pos _ _ _ _ 33 CD4 Cd4 PROPN NNP Number=Sing _ _ _ _ 34 T t PROPN NNP Number=Sing _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 3212 # text = HTLV-I encodes an essential 40-kDa protein termed Tax that not only transactivates the long terminal repeat of this retrovirus but also induces an array of cellular genes. 1 HTLV Htlv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 4 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 essential essential ADJ JJ Degree=Pos _ _ _ _ 7 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kDa kDa NOUN NN Number=Sing _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 Tax Tax NOUN NN Number=Sing _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 not not ADV RB _ _ _ _ _ 15 only only ADV RB _ _ _ _ _ 16 transactivates transactivate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 long long ADJ JJ Degree=Pos _ _ _ _ 19 terminal terminal NOUN NN Number=Sing _ _ _ _ 20 repeat repeat NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 23 retrovirus retrovirus NOUN NN Number=Sing _ _ _ _ 24 but but CCONJ CC _ _ _ _ _ 25 also also ADV RB _ _ _ _ _ 26 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 array array NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 31 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3213 # text = Tax-mediated transformation of T cells likely involves the deregulated expression of various cellular genes that normally regulate lymphocyte growth produced by altered activity of various endogenous host transcription factors. 1 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 transformation transformation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 likely likely ADV RB _ _ _ _ _ 9 involves involf VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 deregulated deregulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 various various ADJ JJ Degree=Pos _ _ _ _ 15 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 16 genes gene NOUN NNS Number=Plur _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 normally normally ADV RB _ _ _ _ _ 19 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 lymphocyte lymphocyte ADJ JJ Degree=Pos _ _ _ _ 21 growth growth NOUN NN Number=Sing _ _ _ _ 22 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 altered alter VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 various various ADJ JJ Degree=Pos _ _ _ _ 28 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 29 host host NOUN NN Number=Sing _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ _ 31 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3214 # text = In particular, Tax is capable of modulating the expression or activity of various host transcription factors, including members of the NF-kappa B/Rel and CREB/ATF families, as well as the cellular factors HEB-1 and p67SRF. 1 In in ADP IN _ _ _ _ _ 2 particular particular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 Tax tax NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 capable capable ADJ JJ Degree=Pos _ _ _ _ 7 of of SCONJ IN _ _ _ _ _ 8 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 various various ADJ JJ Degree=Pos _ _ _ _ 15 host host NOUN NN Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 including include VERB VBG VerbForm=Ger _ _ _ _ 20 members member NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa PROPN NNP Number=Sing _ _ _ _ 26 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 / / PUNCT , _ _ _ _ SpaceAfter=No 28 Rel Rel PROPN NNP Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 / / PUNCT , _ _ _ _ SpaceAfter=No 32 ATF ATF PROPN NNP Number=Sing _ _ _ _ 33 families family NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 as as ADV RB _ _ _ _ _ 36 well well ADV RB Degree=Pos _ _ _ _ 37 as as ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 40 factors factor NOUN NNS Number=Plur _ _ _ _ 41 HEB HEB NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 1 1 NUM CD NumType=Card _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 p67SRF p67srf NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 3215 # text = An additional distinguishing characteristic of HTLV-I infection is the profound state of viral latency that is present in circulating primary leukemic T cells. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 additional additional ADJ JJ Degree=Pos _ _ _ _ 3 distinguishing distinguishing ADJ JJ Degree=Pos _ _ _ _ 4 characteristic characteristic NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 infection infection NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 profound profound ADJ JJ Degree=Pos _ _ _ _ 13 state state NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 viral viral ADJ JJ Degree=Pos _ _ _ _ 16 latency latency NOUN NN Number=Sing _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 present present ADJ JJ Degree=Pos _ _ _ _ 20 in in SCONJ IN _ _ _ _ _ 21 circulating circulate VERB VBG VerbForm=Ger _ _ _ _ 22 primary primary ADJ JJ Degree=Pos _ _ _ _ 23 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3216 # text = In this study, we demonstrate that HTLV-I Tax can physically associate with p100, the product of the Rel-related NF-kappa B2 gene, both in transfected cells and in HTLV-I-infected leukemic T-cell lines. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 HTLV HTLV NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 Tax tax NOUN NN Number=Sing _ _ _ _ 12 can can AUX MD VerbForm=Fin _ _ _ _ 13 physically physically ADV RB _ _ _ _ _ 14 associate associate VERB VB VerbForm=Inf _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 p100 p100 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 product product NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 Rel- rel- SYM SYM _ _ _ _ SpaceAfter=No 23 related relate ADJ JJ Degree=Pos _ _ _ _ 24 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa NOUN NN Number=Sing _ _ _ _ 27 B2 b2 NOUN NN Number=Sing _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 both both CCONJ CC _ _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 transfected transfected VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT , _ _ _ _ SpaceAfter=No 38 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 42 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 cell cell NOUN NN Number=Sing _ _ _ _ 44 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 3217 # text = Furthermore, the physical interaction of Tax with p100 leads to the inhibition of Tax-induced activation of the HTLV-I and human immunodeficiency virus type 1 long terminal repeats, reflecting p100-mediated cytoplasmic sequestration of the normally nuclearly expressed Tax protein. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 physical physical ADJ JJ Degree=Pos _ _ _ _ 5 interaction interaction NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Tax tax NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 p100 p100 NUM CD NumType=Card _ _ _ _ 10 leads lead NOUN NNS Number=Plur _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 Tax tax PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 27 virus virus NOUN NN Number=Sing _ _ _ _ 28 type type NOUN NN Number=Sing _ _ _ _ 29 1 1 NUM CD NumType=Card _ _ _ _ 30 long long ADJ JJ Degree=Pos _ _ _ _ 31 terminal terminal NOUN NN Number=Sing _ _ _ _ 32 repeats repeat NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 reflecting reflect VERB VBG VerbForm=Ger _ _ _ _ 35 p100 p100 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 39 sequestration sequestration NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 normally normally ADV RB _ _ _ _ _ 43 nuclearly nuclearly ADV RB _ _ _ _ _ 44 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 Tax Tax NOUN NN Number=Sing _ _ _ _ 46 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 3218 # text = In contrast, a mutant of Tax that selectively fails to activate nuclear NF-kappa B expression does not associate with p100. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 mutant mutant NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Tax tax NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 selectively selectively ADV RB _ _ _ _ _ 10 fails fail VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 activate activate VERB VB VerbForm=Inf _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 associate associate VERB VB VerbForm=Inf _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 p100 p100 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3219 # text = (ABSTRACT TRUNCATED AT 250 WORDS) 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 ABSTRACT ABSTRACT X GW _ _ _ _ _ 3 TRUNCATED Truncate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 AT at ADV RB _ _ _ _ _ 5 250 250 NUM CD NumType=Card _ _ _ _ 6 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3220 # text = Document 003003419 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003419 003003419 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3221 # text = A direct interaction between the adaptor protein Cbl-b and the kinase zap-70 induces a positive signal in T cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 direct direct ADJ JJ Degree=Pos _ _ _ _ 3 interaction interaction NOUN NN Number=Sing _ _ _ _ 4 between between ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 adaptor adaptor NOUN NN Number=Sing _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 Cbl Cbl NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 b b NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 kinase kinase NOUN NN Number=Sing _ _ _ _ 14 zap zap NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 70 70 NUM CD NumType=Card _ _ _ _ 17 induces induce NOUN NNS Number=Plur _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 positive positive ADJ JJ Degree=Pos _ _ _ _ 20 signal signal NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3222 # text = Engagement of the T-cell receptor (TCR)-CD3 complex induces a rapid increase in the activities of Src-family and Syk/Zap-70-family kinases [1] [2]. 1 Engagement engagement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 TCR TCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 - - PUNCT : _ _ _ _ SpaceAfter=No 11 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 12 complex complex NOUN NN Number=Sing _ _ _ _ 13 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 16 increase increase NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 activities activity NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 Src- src- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 family family NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 Syk/Zap-70-family Syk/Zap-70-family NOUN NN Number=Sing _ _ _ _ 25 kinases kinase NOUN NNS Number=Plur _ _ _ _ 26 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 ] ] PUNCT -RRB- _ _ _ _ _ 29 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3223 # text = These activated kinases then induce the tyrosine phosphorylation of multiple intracellular proteins, eventually leading to T-cell activation. 1 These these PRON DT Number=Plur|PronType=Dem _ _ _ _ 2 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 kinases kinase NOUN NNS Number=Plur _ _ _ _ 4 then then ADV RB PronType=Dem _ _ _ _ 5 induce induce SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 8 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 11 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 12 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 eventually eventually ADV RB _ _ _ _ _ 15 leading lead VERB VBG VerbForm=Ger _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3224 # text = One of the prominent substrates for these kinases is the adaptor protein Cbl [3] and recent studies suggest that Cbl negatively regulates upstream kinases such as Syk and Zap-70 [4] [5]. 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 prominent prominent ADJ JJ Degree=Pos _ _ _ _ 5 substrates substrate NOUN NNS Number=Plur _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 kinases kinase NOUN NNS Number=Plur _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 adaptor adaptor NOUN NN Number=Sing _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 Cbl Cbl PROPN NNP Number=Sing _ _ _ _ 14 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 3 3 X LS _ _ _ _ SpaceAfter=No 16 ] ] PUNCT -RRB- _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 recent recent ADJ JJ Degree=Pos _ _ _ _ 19 studies study NOUN NNS Number=Plur _ _ _ _ 20 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 Cbl Cbl PROPN NNP Number=Sing _ _ _ _ 23 negatively negatively ADV RB _ _ _ _ _ 24 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 26 kinases kinase NOUN NNS Number=Plur _ _ _ _ 27 such such ADJ JJ Degree=Pos _ _ _ _ 28 as as ADP IN _ _ _ _ _ 29 Syk Syk PROPN NNP Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 Zap Zap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - SYM SYM _ _ _ _ SpaceAfter=No 33 70 70 NUM CD NumType=Card _ _ _ _ 34 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ] ] PUNCT -RRB- _ _ _ _ _ 37 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 3225 # text = Cbl-b, a homologue of Cbl, is widely expressed in many tissues and cells including hematopoietic cells [6] [7]. 1 Cbl Cbl ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 b b NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 homologue homologue NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Cbl Cbl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 widely widely ADV RB _ _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 many many ADJ JJ Degree=Pos _ _ _ _ 15 tissues tissue NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 including include VERB VBG VerbForm=Ger _ _ _ _ 19 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ] ] PUNCT -RRB- _ _ _ _ _ 24 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3226 # text = Cbl-b undergoes rapid tyrosine phosphorylation upon stimulation of the TCR and cytokine receptors [8] [9]. 1 Cbl Cbl ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 b b NOUN NN Number=Sing _ _ _ _ 4 undergoes undergo NOUN NNS Number=Plur _ _ _ _ 5 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 6 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 7 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 8 upon upon ADP IN _ _ _ _ _ 9 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 TCR Tcr NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 15 receptors receptor NOUN NNS Number=Plur _ _ _ _ 16 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 8 8 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ] ] PUNCT -RRB- _ _ _ _ _ 19 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3227 # text = The role of Cbl-b is unclear, however. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Cbl Cbl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 b b NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 unclear unclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 however however ADV RB _ _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 3228 # text = Here, we show that overexpression of Cbl-b in T cells induced the constitutive activation of the transcription factor nuclear factor of activated T cells (NFAT). 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Cbl Cbl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 b b NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 T t PROPN NNP Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3229 # text = A loss-of-function mutation in Cbl-b disrupted the interaction between Cbl-b and Zap-70 and nearly completely abrogated the Cbl-b-mediated activation of NFAT. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 loss loss NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 of of ADP IN _ _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 function function NOUN NN Number=Sing _ _ _ _ 7 mutation mutation NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 Cbl Cbl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 b benefit NOUN NN Number=Sing _ _ _ _ 12 disrupted disrupt VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 interaction interaction NOUN NN Number=Sing _ _ _ _ 15 between between ADP IN _ _ _ _ _ 16 Cbl Cbl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 b b NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 Zap Zap NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 70 70 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 nearly nearly ADV RB _ _ _ _ _ 25 completely completely ADV RB _ _ _ _ _ 26 abrogated abrogate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 Cbl Cbl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 b- b- SYM SYM _ _ _ _ SpaceAfter=No 31 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 3230 # text = Unlike the proposed role of Cbl as a negative regulator, our results suggest that the Cbl homologue Cbl-b has a positive role in T-cell signaling, most likely via a direct interaction with the upstream kinase Zap-70. 1 Unlike unlike ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 proposed propose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 Cbl Cbl PROPN NNP Number=Sing _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 negative negative ADJ JJ Degree=Pos _ _ _ _ 10 regulator regulator NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 13 results result NOUN NNS Number=Plur _ _ _ _ 14 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 Cbl Cbl PROPN NNP Number=Sing _ _ _ _ 18 homologue homologue NOUN NN Number=Sing _ _ _ _ 19 Cbl Cbl NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 b b NOUN NN Number=Sing _ _ _ _ 22 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 positive positive ADJ JJ Degree=Pos _ _ _ _ 25 role role NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 most most ADV RBS _ _ _ _ _ 32 likely likely ADV RB _ _ _ _ _ 33 via via ADP IN _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 direct direct ADJ JJ Degree=Pos _ _ _ _ 36 interaction interaction NOUN NN Number=Sing _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 40 kinase kinase NOUN NN Number=Sing _ _ _ _ 41 Zap Zap NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 70 70 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3231 # text = Document 003003421 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003421 003003421 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3232 # text = Disruption of the human SCL locus by "illegitimate" V-(D)-J recombinase activity. 1 Disruption disruption NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 SCL Scl NOUN NN Number=Sing _ _ _ _ 6 locus locus NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 " " PUNCT `` _ _ _ _ SpaceAfter=No 9 illegitimate illegitimate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 " " PUNCT '' _ _ _ _ _ 11 V v NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 D d PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 - - PUNCT : _ _ _ _ SpaceAfter=No 17 J j NOUN NN Number=Sing _ _ _ _ 18 recombinase recombinase NOUN NN Number=Sing _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3233 # text = A fusion complementary DNA in the T cell line HSB-2 elucidates a provocative mechanism for the disruption of the putative hematopoietic transcription factor SCL. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 fusion fusion NOUN NN Number=Sing _ _ _ _ 3 complementary complementary ADJ JJ Degree=Pos _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 T T PROPN NNP Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 line line NOUN NN Number=Sing _ _ _ _ 10 HSB Hsb NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 elucidates elucidate NOUN NNS Number=Plur _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 provocative provocative ADJ JJ Degree=Pos _ _ _ _ 16 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 disruption disruption NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 putative putative ADJ JJ Degree=Pos _ _ _ _ 23 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 SCL Scl NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3234 # text = The fusion cDNA results from an interstitial deletion between a previously unknown locus, SIL (SCL interrupting locus), and the 5' untranslated region of SCL. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 fusion fusion NOUN NN Number=Sing _ _ _ _ 3 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 interstitial interstitial ADJ JJ Degree=Pos _ _ _ _ 8 deletion deletion NOUN NN Number=Sing _ _ _ _ 9 between between ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 previously previously ADV RB _ _ _ _ _ 12 unknown unknown ADJ JJ Degree=Pos _ _ _ _ 13 locus locus NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 SIL SIL PROPN NNP Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 SCL SCL PROPN NNP Number=Sing _ _ _ _ 18 interrupting interrupt VERB VBG VerbForm=Ger _ _ _ _ 19 locus locus NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ' 's PUNCT `` _ _ _ _ _ 26 untranslated untranslated ADJ JJ Degree=Pos _ _ _ _ 27 region region NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 SCL SCL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3235 # text = Similar to 1;14 translocations, this deletion disrupts the SCL 5' regulatory region. 1 Similar similar ADJ JJ Degree=Pos _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 1; 1; PUNCT , _ _ _ _ SpaceAfter=No 4 14 14 NUM CD NumType=Card _ _ _ _ 5 translocations translocation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 deletion deletion NOUN NN Number=Sing _ _ _ _ 9 disrupts disrupt VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 SCL Scl NOUN NN Number=Sing _ _ _ _ 12 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ' ' PUNCT `` _ _ _ _ _ 14 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 15 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 3236 # text = This event is probably mediated by V-(D)-J recombinase activity, although neither locus is an immunoglobulin or a T cell receptor. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 event event NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 probably probably ADV RB _ _ _ _ _ 5 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 V V PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 D d PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 J j NOUN NN Number=Sing _ _ _ _ 14 recombinase recombinase NOUN NN Number=Sing _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 although although SCONJ IN _ _ _ _ _ 18 neither neither DET DT _ _ _ _ _ 19 locus locus NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 immunoglobulin immunoglobulin NOUN NN Number=Sing _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3237 # text = Two other T cell lines, CEM and RPMI 8402, have essentially identical deletions. 1 Two two NUM CD NumType=Card _ _ _ _ 2 other other ADJ JJ Degree=Pos _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 CEM CEM PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 RPMI RPMI PROPN NNP Number=Sing _ _ _ _ 10 8402 8402 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 essentially essentially ADV RB _ _ _ _ _ 14 identical identical ADJ JJ Degree=Pos _ _ _ _ 15 deletions deletion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 3238 # text = Thus, in lymphocytes, growth-affecting genes other than immune receptors risk rearrangements. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 affecting affecting VERB VBG VerbForm=Ger _ _ _ _ 9 genes gene NOUN NNS Number=Plur _ _ _ _ 10 other other ADJ JJ Degree=Pos _ _ _ _ 11 than than ADP IN _ _ _ _ _ 12 immune immune ADJ JJ Degree=Pos _ _ _ _ 13 receptors receptor NOUN NNS Number=Plur _ _ _ _ 14 risk risk VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 rearrangements rearrangement NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3239 # text = Document 003003423 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003423 003003423 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3240 # text = Differential regulation of IL-6 gene transcription and expression by IL-4 and IL-10 in human monocytic cell lines. 1 Differential differential ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 6 6 NUM CD NumType=Card _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 4 4 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 10 10 NUM CD NumType=Card _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3241 # text = IL-4 and IL-10 inhibit the cytokine production and mRNA expression by monocytes/macrophages. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 10 10 NUM CD NumType=Card _ _ _ _ 8 inhibit inhibit NOUN NN Number=Sing _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 11 production production NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3242 # text = To investigate the molecular mechanism of the inhibitory effect on transcriptional or post-transcriptional regulation of IL-6 gene expression by IL-4 and IL-10, we studied IL-6 production, expression level of IL-6 mRNA, IL-6 promoter activity, transcriptional activity of NF-kappaB and NF-IL-6, and IL-6 mRNA stability in human monocytic cell lines, THP-1 and U937, stimulated by PMA and LPS in the absence or the presence of IL-4 or IL-10. 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 5 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 9 effect effect NOUN NN Number=Sing _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 post post X AFX _ _ _ _ SpaceAfter=No 14 -transcriptional -transcriptional ADJ JJ Degree=Pos _ _ _ _ 15 regulation regulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 6 6 NUM CD NumType=Card _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 4 4 NUM CD NumType=Card _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 32 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 33 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 6 6 NUM CD NumType=Card _ _ _ _ 36 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 expression expression NOUN NN Number=Sing _ _ _ _ 39 level level NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 6 6 NUM CD NumType=Card _ _ _ _ 44 mRNA mRNA NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 6 6 NUM CD NumType=Card _ _ _ _ 49 promoter promoter NOUN NN Number=Sing _ _ _ _ 50 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 , , PUNCT , _ _ _ _ _ 52 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 53 activity activity NOUN NN Number=Sing _ _ _ _ 54 of of ADP IN _ _ _ _ _ 55 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 56 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 57 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 58 and and CCONJ CC _ _ _ _ _ 59 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 60 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 61 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 62 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 63 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 64 , , PUNCT , _ _ _ _ _ 65 and and CCONJ CC _ _ _ _ _ 66 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 67 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 68 6 6 NUM CD NumType=Card _ _ _ _ 69 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 70 stability stability NOUN NN Number=Sing _ _ _ _ 71 in in ADP IN _ _ _ _ _ 72 human human ADJ JJ Degree=Pos _ _ _ _ 73 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 74 cell cell NOUN NN Number=Sing _ _ _ _ 75 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 76 , , PUNCT , _ _ _ _ _ 77 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 78 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 79 1 1 NUM CD NumType=Card _ _ _ _ 80 and and CCONJ CC _ _ _ _ _ 81 U937 U937 NUM CD NumType=Card _ _ _ SpaceAfter=No 82 , , PUNCT , _ _ _ _ _ 83 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 84 by by ADP IN _ _ _ _ _ 85 PMA PMA PROPN NNP Number=Sing _ _ _ _ 86 and and CCONJ CC _ _ _ _ _ 87 LPS LPS PROPN NNP Number=Sing _ _ _ _ 88 in in ADP IN _ _ _ _ _ 89 the the DET DT Definite=Def|PronType=Art _ _ _ _ 90 absence absence NOUN NN Number=Sing _ _ _ _ 91 or or CCONJ CC _ _ _ _ _ 92 the the DET DT Definite=Def|PronType=Art _ _ _ _ 93 presence presence NOUN NN Number=Sing _ _ _ _ 94 of of ADP IN _ _ _ _ _ 95 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 96 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 97 4 4 NUM CD NumType=Card _ _ _ _ 98 or or CCONJ CC _ _ _ _ _ 99 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 100 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 101 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 102 . . PUNCT . _ _ _ _ _ # sent_id = 3243 # text = Both IL-4 and IL-10 were seen to inhibit IL-6 production and the expression of IL-6 mRNA in both monocytic cell lines studied. 1 Both both DET DT _ _ _ _ _ 2 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 4 4 NUM CD NumType=Card _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 10 10 NUM CD NumType=Card _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 13 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 6 6 NUM CD NumType=Card _ _ _ _ 16 production production NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 6 6 NUM CD NumType=Card _ _ _ _ 24 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 both both DET DT _ _ _ _ _ 27 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 lines line NOUN NNS Number=Plur _ _ _ _ 30 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3244 # text = In chloramphenicol acetyltransferase assays, utilizing the transient transfection of a chloramphenicol acetyltransferase reporter plasmid containing the IL-6 gene promoter, IL-4, but not IL-10, suppressed the transcriptional activity of the IL-6 gene promoter stimulated by PMA and LPS. 1 In in ADP IN _ _ _ _ _ 2 chloramphenicol chloramphenicol ADJ JJ Degree=Pos _ _ _ _ 3 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 4 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 utilizing utilize VERB VBG VerbForm=Ger _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 transient transient ADJ JJ Degree=Pos _ _ _ _ 9 transfection transfection NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 13 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 14 reporter reporter NOUN NN Number=Sing _ _ _ _ 15 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 16 containing contain VERB VBG VerbForm=Ger _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 6 6 NUM CD NumType=Card _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 but but CCONJ CC _ _ _ _ _ 29 not not ADV RB _ _ _ _ _ 30 IL Il SYM $ _ _ _ _ SpaceAfter=No 31 - - SYM SYM _ _ _ _ SpaceAfter=No 32 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 suppressed suppress VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 37 activity activity NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 6 6 NUM CD NumType=Card _ _ _ _ 43 gene gene NOUN NN Number=Sing _ _ _ _ 44 promoter promoter NOUN NN Number=Sing _ _ _ _ 45 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 by by ADP IN _ _ _ _ _ 47 PMA PMA PROPN NNP Number=Sing _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 3245 # text = Electrophoretic mobility shift assays showed that IL-4, but not IL-10, inhibited nuclear NF-kappaB activity, and that IL-4 and IL-10 did not affect NF-IL-6 activity. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assays assays NOUN NNS Number=Plur _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - SYM SYM _ _ _ _ SpaceAfter=No 9 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 not not ADV RB _ _ _ _ _ 13 IL Il SYM $ _ _ _ _ SpaceAfter=No 14 - - SYM SYM _ _ _ _ SpaceAfter=No 15 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - SYM SYM _ _ _ _ SpaceAfter=No 28 4 4 NUM CD NumType=Card _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 10 10 NUM CD NumType=Card _ _ _ _ 33 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 not not PART RB _ _ _ _ _ 35 affect affect VERB VB VerbForm=Inf _ _ _ _ 36 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 6 6 NUM CD NumType=Card _ _ _ _ 41 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3246 # text = On the other hand, IL-10 enhanced the degradation of IL-6 mRNA in a mRNA stability assay. 1 On on ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 hand hand NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 10 10 NUM CD NumType=Card _ _ _ _ 9 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 degradation degradation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 6 6 NUM CD NumType=Card _ _ _ _ 16 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 20 stability stability NOUN NN Number=Sing _ _ _ _ 21 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3247 # text = These results suggest that IL-4 may inhibit the transcription of the IL-6 gene by affecting NF-kappaB binding activity, while IL-10 may inhibit the IL-6 mRNA levels post-transcriptionally, without suppressing promoter activity. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 4 4 NUM CD NumType=Card _ _ _ _ 8 may may AUX MD VerbForm=Fin _ _ _ _ 9 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 6 6 NUM CD NumType=Card _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 by by SCONJ IN _ _ _ _ _ 19 affecting affect VERB VBG VerbForm=Ger _ _ _ _ 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 23 binding binding VERB VBG VerbForm=Ger _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 while while SCONJ IN _ _ _ _ _ 27 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - SYM SYM _ _ _ _ SpaceAfter=No 29 10 10 NUM CD NumType=Card _ _ _ _ 30 may may AUX MD VerbForm=Fin _ _ _ _ 31 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT , _ _ _ _ SpaceAfter=No 35 6 6 NUM CD NumType=Card _ _ _ _ 36 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 37 levels level NOUN NNS Number=Plur _ _ _ _ 38 post-transcriptionally post-transcriptionally ADV RB _ _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 without without SCONJ IN _ _ _ _ _ 41 suppressing suppresse VERB VBG VerbForm=Ger _ _ _ _ 42 promoter promoter ADJ JJ Degree=Pos _ _ _ _ 43 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 3248 # text = Therefore, we conclude that IL-4 and IL-10 inhibit IL-6 production by different mechanisms in human monocytic cell lines. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 4 4 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 10 10 NUM CD NumType=Card _ _ _ _ 13 inhibit inhibit NOUN NN Number=Sing _ _ _ _ 14 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 6 6 NUM CD NumType=Card _ _ _ _ 17 production production NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 different different ADJ JJ Degree=Pos _ _ _ _ 20 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3249 # text = Document 003003424 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003424 003003424 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3250 # text = Flutamide in the treatment of hirsutism: long-term clinical effects, endocrine changes, and androgen receptor behavior. 1 Flutamide Flutamide VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 treatment treatment NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 hirsutism hirsutism NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 : : PUNCT : _ _ _ _ _ 8 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 term term NOUN NN Number=Sing _ _ _ _ 11 clinical clinical NOUN NN Number=Sing _ _ _ _ 12 effects effect NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 endocrine endocrine VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 15 changes change NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 androgen androgen ADJ JJ Degree=Pos _ _ _ _ 19 receptor receptor NOUN NN Number=Sing _ _ _ _ 20 behavior behavior NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3251 # text = OBJECTIVE: 1 OBJECTIVE objective NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 3252 # text = To investigate the long-term effects of treatment with low doses of flutamide on clinical and hormonal parameters, as well as on the androgen receptor status, in hirsute women. 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 term term NOUN NN Number=Sing _ _ _ _ 7 effects effect NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 treatment treatment NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 low low ADJ JJ Degree=Pos _ _ _ _ 12 doses dos NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 flutamide flutamide NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 hormonal hormonal ADJ JJ Degree=Pos _ _ _ _ 19 parameters parameter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 as as ADV RB _ _ _ _ _ 22 well well ADV RB Degree=Pos _ _ _ _ 23 as as ADP IN _ _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 androgen androgen ADJ JJ Degree=Pos _ _ _ _ 27 receptor receptor NOUN NN Number=Sing _ _ _ _ 28 status status NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 hirsute hirsute ADJ JJ Degree=Pos _ _ _ _ 32 women woman NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3253 # text = DESIGN: 1 DESIGN Design NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 3254 # text = Eighteen hirsute patients with regular menses were studied basally and during treatment with 125 mg flutamide, three times per day for 12 months. 1 Eighteen eighteen NUM CD NumType=Card _ _ _ _ 2 hirsute hirsute ADJ JJ Degree=Pos _ _ _ _ 3 patients patient NOUN NNS Number=Plur _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 regular regular ADJ JJ Degree=Pos _ _ _ _ 6 menses mense NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 basally basally ADV RB _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 during during ADP IN _ _ _ _ _ 12 treatment treatment NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 125 125 NUM CD NumType=Card _ _ _ _ 15 mg mg NOUN NN Number=Sing _ _ _ _ 16 flutamide flutamide NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 three three NUM CD NumType=Card _ _ _ _ 19 times time NOUN NNS Number=Plur _ _ _ _ 20 per per ADP IN _ _ _ _ _ 21 day day NOUN NN Number=Sing _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 12 12 NUM CD NumType=Card _ _ _ _ 24 months month NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3255 # text = Barrier or intrauterine contraception was used during the study in sexually active women. 1 Barrier barrier NOUN NN Number=Sing _ _ _ _ 2 or or CCONJ CC _ _ _ _ _ 3 intrauterine intrauterine NOUN NN Number=Sing _ _ _ _ 4 contraception contraception NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 during during ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 study study NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 sexually sexually ADV RB _ _ _ _ _ 12 active active ADJ JJ Degree=Pos _ _ _ _ 13 women woman NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 3256 # text = Safety parameters were assessed throughout the study. 1 Safety Safety PROPN NNP Number=Sing _ _ _ _ 2 parameters parameter NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 assessed assess VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 throughout throughout ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 3257 # text = Hirsutism, graded by the modified Ferriman-Gallwey score, and hormonal parameters were evaluated basally and at 4-month intervals during treatment. 1 Hirsutism Hirsutism INTJ UH _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 graded grad VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 modified modify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 Ferriman Ferriman PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Gallwey Gallwey PROPN NNP Number=Sing _ _ _ _ 10 score score NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 hormonal hormonal ADJ JJ Degree=Pos _ _ _ _ 14 parameters parameter NOUN NNS Number=Plur _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 evaluated evaluate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 basally basally ADV RB _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 at at ADP IN _ _ _ _ _ 20 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 month month NOUN NN Number=Sing _ _ _ _ 23 intervals interval NOUN NNS Number=Plur _ _ _ _ 24 during during ADP IN _ _ _ _ _ 25 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3258 # text = Gonadotropin-releasing hormone and ACTH stimulation tests were performed before and after 3 to 4 months of therapy. 1 Gonadotropin Gonadotropin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 releasing release VERB VBG VerbForm=Ger _ _ _ _ 4 hormone hormone NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 ACTH Acth DET DT _ _ _ _ _ 7 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 8 tests test NOUN NNS Number=Plur _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 performed perform VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 before before ADV RB _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 after after ADP IN _ _ _ _ _ 14 3 3 NUM CD NumType=Card _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 4 4 NUM CD NumType=Card _ _ _ _ 17 months month NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 therapy therapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3259 # text = In addition, the concentration of androgen receptors in mononuclear leukocytes was measured, in both the follicular and luteal phases of the menstrual cycle, basally and after 4 months of flutamide treatment. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 concentration concentration NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 androgen androgen ADJ JJ Degree=Pos _ _ _ _ 8 receptors receptor NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 11 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 measured measure VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 both both CCONJ CC _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 follicular follicular ADJ JJ Degree=Pos _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 luteal luteal ADJ JJ Degree=Pos _ _ _ _ 21 phases phase NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 menstrual menstrual ADJ JJ Degree=Pos _ _ _ _ 25 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 basally basally ADV RB _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 after after ADP IN _ _ _ _ _ 30 4 4 NUM CD NumType=Card _ _ _ _ 31 months month NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 flutamide flutamide ADJ JJ Degree=Pos _ _ _ _ 34 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 3260 # text = RESULTS: 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 3261 # text = Flutamide was well tolerated in all women, with the noticeable exception of one patient who presented increased serum transaminase after 8 months of therapy. 1 Flutamide Flutamide PROPN NNP Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 well well ADV RB Degree=Pos _ _ _ _ 4 tolerated tolerate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 all all DET DT _ _ _ _ _ 7 women woman NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 noticeable noticeable ADJ JJ Degree=Pos _ _ _ _ 12 exception exception NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 one one NUM CD NumType=Card _ _ _ _ 15 patient patient NOUN NN Number=Sing _ _ _ _ 16 who who PRON WP PronType=Rel _ _ _ _ 17 presented present VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 serum serum NOUN NN Number=Sing _ _ _ _ 20 transaminase transaminase NOUN NN Number=Sing _ _ _ _ 21 after after ADP IN _ _ _ _ _ 22 8 8 NUM CD NumType=Card _ _ _ _ 23 months month NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 therapy therapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3262 # text = Hirsutism markedly improved in all women during the treatment (Ferriman-Gallwey score after 1 year: 4.1 +/- 0.5 versus 14.1 +/- 0.9). 1 Hirsutism Hirsutism INTJ UH _ _ _ _ _ 2 markedly markedly ADV RB _ _ _ _ _ 3 improved improve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 all all DET DT _ _ _ _ _ 6 women woman NOUN NNS Number=Plur _ _ _ _ 7 during during ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 treatment treatment NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 Ferriman Ferriman PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 Gallwey Gallwey PROPN NNP Number=Sing _ _ _ _ 14 score score NOUN NN Number=Sing _ _ _ _ 15 after after ADP IN _ _ _ _ _ 16 1 1 NUM CD NumType=Card _ _ _ _ 17 year year NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 : : PUNCT : _ _ _ _ _ 19 4.1 4.1 NUM CD NumType=Card _ _ _ _ 20 +/- +/- SYM SYM _ _ _ _ _ 21 0.5 0.5 NUM CD NumType=Card _ _ _ _ 22 versus versus ADP IN _ _ _ _ _ 23 14.1 14.1 NUM CD NumType=Card _ _ _ _ 24 +/- +/- SYM SYM _ _ _ _ _ 25 0.9 0.9 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3263 # text = A reduction of serum androgens was found, whereas no change was observed in either basal or GnRH-stimulated gonadotropins or in the cortisol and 17 alpha-hydroxyprogesterone response to ACTH. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 reduction reduction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 serum serum NOUN NN Number=Sing _ _ _ _ 5 androgens androgen NOUN NNS Number=Plur _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 whereas whereas SCONJ IN _ _ _ _ _ 10 no no DET DT _ _ _ _ _ 11 change change NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 either either DET DT _ _ _ _ _ 16 basal basal NOUN NN Number=Sing _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 GnRH GnRh NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 gonadotropins gonadotropin NOUN NNS Number=Plur _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 cortisol cortisol NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 17 17 NUM CD NumType=Card _ _ _ _ 28 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 hydroxyprogesterone hydroxyprogesterone NOUN NN Number=Sing _ _ _ _ 31 response response NOUN NN Number=Sing _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 ACTH ACTH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 3264 # text = Cycles remained ovulatory. 1 Cycles cycle NOUN NNS Number=Plur _ _ _ _ 2 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 ovulatory ovulatory ADV RB _ _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ _ # sent_id = 3265 # text = Before treatment, the number of androgen receptors was higher in the luteal than in the follicular phase. 1 Before before ADP IN _ _ _ _ _ 2 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 number number NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 androgen androgen ADJ JJ Degree=Pos _ _ _ _ 8 receptors receptor NOUN NNS Number=Plur _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 higher higher ADJ JJR Degree=Cmp _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 luteal luteal NOUN NN Number=Sing _ _ _ _ 14 than than ADP IN _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 follicular follicular ADJ JJ Degree=Pos _ _ _ _ 18 phase phase NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3266 # text = This rhythmic differentiation disappeared after the patients had been given the antiandrogen drug. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 rhythmic rhythmic ADJ JJ Degree=Pos _ _ _ _ 3 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 4 disappeared disappear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 after after ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 patients patient NOUN NN Number=Sing _ _ _ _ 8 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 10 given give VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 antiandrogen antiandrogen ADJ JJ Degree=Pos _ _ _ _ 13 drug drug NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 3267 # text = CONCLUSIONS: 1 CONCLUSIONS conclusion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 3268 # text = Flutamide is effective in the treatment of hirsutism but requires constant surveillance of liver function. 1 Flutamide Flutamide PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 effective effective ADJ JJ Degree=Pos _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 treatment treatment NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 hirsutism hirsutism NOUN NN Number=Sing _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 constant constant ADJ JJ Degree=Pos _ _ _ _ 12 surveillance surveillance NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 liver liver NOUN NN Number=Sing _ _ _ _ 15 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 3269 # text = Androgen receptor blockade might be potentiated by a reduction of serum androgens. 1 Androgen Androgen ADJ JJ Degree=Pos _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ _ 3 blockade blockade NOUN NN Number=Sing _ _ _ _ 4 might might AUX MD VerbForm=Fin _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 potentiated potentiate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 reduction reduction NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 serum serum NOUN NN Number=Sing _ _ _ _ 12 androgens androgen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 3270 # text = Flutamide affects androgen receptor behavior during the menstrual cycle. 1 Flutamide Flutamide VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 affects affect PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 3 androgen androgen ADJ JJ Degree=Pos _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ _ 5 behavior behavior NOUN NN Number=Sing _ _ _ _ 6 during during ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 menstrual menstrual ADJ JJ Degree=Pos _ _ _ _ 9 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 3271 # text = The meaning of this finding remains to be elucidated . 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 meaning meaning NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 finding finding NOUN NN Number=Sing _ _ _ _ 6 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 elucidated elucidate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3272 # text = Document 003003430 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003430 003003430 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3273 # text = E1A gene expression induces susceptibility to killing by NK cells following immortalization but not adenovirus infection of human cells. 1 E1A E1a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 gene gene ADJ JJ Degree=Pos _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 induces induce NOUN NNS Number=Plur _ _ _ _ 5 susceptibility susceptibility NOUN NN Number=Sing _ _ _ _ 6 to to SCONJ IN _ _ _ _ _ 7 killing kill VERB VBG VerbForm=Ger _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 NK NK PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 following follow VERB VBG VerbForm=Ger _ _ _ _ 12 immortalization immortalization NOUN NN Number=Sing _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 not not ADV RB _ _ _ _ _ 15 adenovirus adenovirus ADJ JJ Degree=Pos _ _ _ _ 16 infection infection NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3274 # text = Adenovirus 1 Adenovirus Adenovirus PROPN NNP Number=Sing _ _ _ _ # sent_id = 3275 # text = (Ad) infection and E1A transfection were used to model changes in susceptibility to NK cell killing caused by transient vs stable E1A expression in human cells. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 Ad ad PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 infection infection NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 E1A E1a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 transfection transfection NOUN NN Number=Sing _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 model model NOUN NN Number=Sing _ _ _ _ 12 changes change NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 susceptibility susceptibility NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 NK Nk PROPN NNP Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 killing kill NOUN NN Number=Sing _ _ _ _ 19 caused cause VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 transient transient NOUN NN Number=Sing _ _ _ _ 22 vs versus ADP IN Abbr=Yes _ _ _ _ 23 stable stable ADJ JJ Degree=Pos _ _ _ _ 24 E1 E1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3276 # text = Only stably transfected target cells exhibited cytolytic susceptibility, despite expression of equivalent levels of E1A proteins in Ad-infected targets. 1 Only only ADV RB _ _ _ _ _ 2 stably stably ADV RB _ _ _ _ _ 3 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 target target NOUN NN Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 exhibited exhibite VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 cytolytic cytolytic ADJ JJ Degree=Pos _ _ _ _ 8 susceptibility susceptibility NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 despite despite ADP IN _ _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 equivalent equivalent ADJ JJ Degree=Pos _ _ _ _ 14 levels level NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 E1A E1a NOUN NN Number=Sing _ _ _ _ 17 proteins protein NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 Ad ad PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 targets target NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3277 # text = The inability of E1A gene products to induce cytolytic susceptibility during infection was not explained by an inhibitory effect of viral infection on otherwise susceptible target cells or by viral gene effects on class I MHC antigen expression on target cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inability inability NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 E1 E1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 gene gene ADJ JJ Degree=Pos _ _ _ _ 7 products product NOUN NNS Number=Plur _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 induce induce VERB VB VerbForm=Inf _ _ _ _ 10 cytolytic cytolytic ADJ JJ Degree=Pos _ _ _ _ 11 susceptibility susceptibility NOUN NN Number=Sing _ _ _ _ 12 during during ADP IN _ _ _ _ _ 13 infection infection NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 explained explain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 20 effect effect NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 viral viral ADJ JJ Degree=Pos _ _ _ _ 23 infection infection NOUN NN Number=Sing _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 otherwise otherwise ADV RB _ _ _ _ _ 26 susceptible susceptible ADJ JJ Degree=Pos _ _ _ _ 27 target target NOUN NN Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 or or CCONJ CC _ _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 viral viral ADJ JJ Degree=Pos _ _ _ _ 32 gene gene NOUN NN Number=Sing _ _ _ _ 33 effects effect NOUN NNS Number=Plur _ _ _ _ 34 on on ADP IN _ _ _ _ _ 35 class class NOUN NN Number=Sing _ _ _ _ 36 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 37 MHC MHC PROPN NNP Number=Sing _ _ _ _ 38 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 39 expression expression NOUN NN Number=Sing _ _ _ _ 40 on on ADP IN _ _ _ _ _ 41 target target NOUN NN Number=Sing _ _ _ _ 42 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 3278 # text = This differential effect of E1A expression on the cytolytic phenotypes of infected and stably transfected human cells suggests that human NK cells provide an effective immunologic barrier against the in vivo survival and neoplastic progression of E1A-immortalized cells that may emerge from the reservoir of persistently infected cells in the human host. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 differential differential ADJ JJ Degree=Pos _ _ _ _ 3 effect effect NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 E1 E1 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 cytolytic cytolytic ADJ JJ Degree=Pos _ _ _ _ 11 phenotypes phenotype NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 infected infect ADJ JJ Degree=Pos _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 stably stably ADV RB _ _ _ _ _ 16 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 NK NK PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 effective effective ADJ JJ Degree=Pos _ _ _ _ 27 immunologic immunologic ADJ JJ Degree=Pos _ _ _ _ 28 barrier barrier NOUN NN Number=Sing _ _ _ _ 29 against against ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 vivo vivo NOUN NN Number=Sing _ _ _ _ 33 survival survival NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 neoplastic neoplastic ADJ JJ Degree=Pos _ _ _ _ 36 progression progression NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 E1A E1A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 immortalized immortalize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ _ 42 that that PRON WDT PronType=Rel _ _ _ _ 43 may may AUX MD VerbForm=Fin _ _ _ _ 44 emerge emerge VERB VB VerbForm=Inf _ _ _ _ 45 from from ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 reservoir reservoir NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 persistently persistently ADV RB _ _ _ _ _ 50 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 51 cells cell NOUN NNS Number=Plur _ _ _ _ 52 in in ADP IN _ _ _ _ _ 53 the the DET DT Definite=Def|PronType=Art _ _ _ _ 54 human human ADJ JJ Degree=Pos _ _ _ _ 55 host host NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3279 # text = Document 003003434 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003434 003003434 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3280 # text = Inhibition of the differentiation of human myeloid cell lines by redox changes induced through glutathione depletion. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 lines line NOUN NNS Number=Plur _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 redox redox NOUN NN Number=Sing _ _ _ _ 12 changes change NOUN NNS Number=Plur _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 through through ADP IN _ _ _ _ _ 15 glutathione glutathione NOUN NN Number=Sing _ _ _ _ 16 depletion depletion NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3281 # text = We have investigated the effect of redox changes in vivo on the differentiation of two human myeloid cell lines, HL-60 and KG-1. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 redox redox NOUN NN Number=Sing _ _ _ _ 8 changes change NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 vivo vivo NOUN NN Number=Sing _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 two two NUM CD NumType=Card _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 60 60 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 KG kg NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3282 # text = The glutathione-depleting agent diethyl maleate (DEM) prevented the development of differentiated features in response to phorbol esters, including adherence of the cells to plastic surfaces and repression of the myeloperoxidase and CD34 genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 glutathione glutathione NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 depleting deplet NOUN NN Number=Sing _ _ _ _ 5 agent agent NOUN NN Number=Sing _ _ _ _ 6 diethyl diethyl NOUN NN Number=Sing _ _ _ _ 7 maleate maleate NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 DEM DEM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 development development NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 features feature NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 response response NOUN NN Number=Sing _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 phorbol phorbol VERB VB VerbForm=Inf _ _ _ _ 21 esters ester NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 including include VERB VBG VerbForm=Ger _ _ _ _ 24 adherence adherence NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 plastic plastic ADJ JJ Degree=Pos _ _ _ _ 30 surfaces surface NOUN NNS Number=Plur _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 repression repression NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 myeloperoxidase myeloperoxidase NOUN NN Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 CD34 Cd34 NOUN NN Number=Sing _ _ _ _ 38 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 3283 # text = Moreover, DEM abolished phorbol 12-myristate 13-acetate-induced activation of the transcription factors AP-1 and Egr-1, suggesting that inhibition of differentiation may be due, at least in part, to redox modifications of these proteins. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 DEM DEM PROPN NNP Number=Sing _ _ _ _ 4 abolished abolish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 6 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 myristate myristate NOUN NN Number=Sing _ _ _ _ 9 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 factors factor NOUN NNS Number=Plur _ _ _ _ 19 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 27 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 28 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 31 may may AUX MD VerbForm=Fin _ _ _ _ 32 be be AUX VB VerbForm=Inf _ _ _ _ 33 due due ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 at at ADV RB _ _ _ _ _ 36 least least ADV RBS Degree=Sup _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 part part NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 to to PART TO _ _ _ _ _ 41 redox redox VERB VB VerbForm=Inf _ _ _ _ 42 modifications modification NOUN NNS Number=Plur _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 45 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3284 # text = Document 003003436 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003436 003003436 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3285 # text = A new member of the leucine zipper class of proteins that binds to the HLA DR alpha promoter. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 new new ADJ JJ Degree=Pos _ _ _ _ 3 member member NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 leucine leucine NOUN NN Number=Sing _ _ _ _ 7 zipper zipper NOUN NN Number=Sing _ _ _ _ 8 class class NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 HLA HLA PROPN NNP Number=Sing _ _ _ _ 16 DR Dr PROPN NNP Number=Sing _ _ _ _ 17 alpha alpha ADP IN _ _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3286 # text = Several mutants derived from transformed human B cell lines are defective in expressing major histocompatibility complex (MHC) class II genes. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 mutants mutant NOUN NNS Number=Plur _ _ _ _ 3 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 lines line NOUN NNS Number=Plur _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 defective defective ADJ JJ Degree=Pos _ _ _ _ 12 in in SCONJ IN _ _ _ _ _ 13 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 14 major major ADJ JJ Degree=Pos _ _ _ _ 15 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 16 complex complex NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 MHC MHC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 class class NOUN NN Number=Sing _ _ _ _ 21 II ii NUM CD NumType=Card _ _ _ _ 22 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3287 # text = The failure to express a class II gene in at least one such mutant line has been mapped to the MHC class II X box, a conserved transcriptional element in the promoter region. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 failure failure NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 express express VERB VB VerbForm=Inf _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 class class NOUN NN Number=Sing _ _ _ _ 7 II ii NUM CD NumType=Card _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 at at ADV RB _ _ _ _ _ 11 least least ADV RBS Degree=Sup _ _ _ _ 12 one one NUM CD NumType=Card _ _ _ _ 13 such such ADJ JJ Degree=Pos _ _ _ _ 14 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 15 line line NOUN NN Number=Sing _ _ _ _ 16 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 18 mapped map VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 MHC MHC PROPN NNP Number=Sing _ _ _ _ 22 class class NOUN NN Number=Sing _ _ _ _ 23 II ii NUM CD NumType=Card _ _ _ _ 24 X x NOUN NN Number=Sing _ _ _ _ 25 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 30 element element NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 promoter promoter NOUN NN Number=Sing _ _ _ _ 34 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 3288 # text = A complementary DNA encoding a DNA-binding protein (human X box binding protein, hXBP-1) whose target is the human DR alpha X box and the 3' flanking region has now been cloned. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 complementary complementary ADJ JJ Degree=Pos _ _ _ _ 3 DNA dna NOUN NN Number=Sing _ _ _ _ 4 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 X x NOUN NN Number=Sing _ _ _ _ 13 box box NOUN NN Number=Sing _ _ _ _ 14 binding binding VERB VBG VerbForm=Ger _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 hXBP hXBP NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 1 1 X LS _ _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 22 target target NOUN NN Number=Sing _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 DR Dr NOUN NN Number=Sing _ _ _ _ 27 alpha alpha NOUN NN Number=Sing _ _ _ _ 28 X x SYM SYM _ _ _ _ _ 29 box box NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ' ' PUNCT `` _ _ _ _ _ 34 flanking flank NOUN NN Number=Sing _ _ _ _ 35 region region NOUN NN Number=Sing _ _ _ _ 36 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 now now ADV RB _ _ _ _ _ 38 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 39 cloned clon VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 3289 # text = This complementary DNA encoded a protein with structural similarities to the c-jun proto-oncogene product, and its target sequence was closely related to the palindromic target sequence of c-jun. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 complementary complementary ADJ JJ Degree=Pos _ _ _ _ 3 DNA dna NOUN NN Number=Sing _ _ _ _ 4 encoded encode VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 structural structural ADJ JJ Degree=Pos _ _ _ _ 9 similarities similarity NOUN NNS Number=Plur _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 c- c- SYM NFP _ _ _ _ SpaceAfter=No 13 jun jun NOUN NN Number=Sing _ _ _ _ 14 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 -oncogene -oncogene NOUN NN Number=Sing _ _ _ _ 16 product product NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 20 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 target target NOUN NN Number=Sing _ _ _ _ 22 sequence sequence NOUN NN Number=Sing _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 closely closely ADV RB _ _ _ _ _ 25 related related ADJ JJ Degree=Pos _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 palindromic palindromic ADJ JJ Degree=Pos _ _ _ _ 29 target target NOUN NN Number=Sing _ _ _ _ 30 sequence sequence NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 c- c- SYM NFP _ _ _ _ SpaceAfter=No 33 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 3290 # text = Mutation of the hXBP-1 DNA target sequence decreased DR alpha promoter activity in vivo. 1 Mutation Mutation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 hXBP hxbp NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 DNA dna NOUN NN Number=Sing _ _ _ _ 8 target target NOUN NN Number=Sing _ _ _ _ 9 sequence sequence NOUN NN Number=Sing _ _ _ _ 10 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 DR Dr PROPN NNP Number=Sing _ _ _ _ 12 alpha alpha ADP IN _ _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3291 # text = These studies suggest that the hXBP-1 protein acts as a transcription factor in B cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 hXBP hxbp NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 acts act NOUN NNS Number=Plur _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 B b ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3292 # text = Document 003003437 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003437 003003437 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3293 # text = Binding characteristics of the glucocorticoid receptor in peripheral blood lymphocytes in multiple sclerosis. 1 Binding bind VERB VBG VerbForm=Ger _ _ _ _ 2 characteristics characteristic NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 9 blood blood NOUN NN Number=Sing _ _ _ _ 10 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 13 sclerosis sclerosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3294 # text = Although the exact etiology of multiple sclerosis (MS) remains unresolved, immune reactions are believed to be the central pathogenic mechanisms. 1 Although although SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 exact exact ADJ JJ Degree=Pos _ _ _ _ 4 etiology etiology NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 7 sclerosis sclerosis NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 MS MS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 unresolved unresolved ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 immune immune ADJ JJ Degree=Pos _ _ _ _ 15 reactions reaction NOUN NNS Number=Plur _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 believed believe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 central central ADJ JJ Degree=Pos _ _ _ _ 22 pathogenic pathogenic NOUN NN Number=Sing _ _ _ _ 23 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3295 # text = Endogenous and therapeutic steroid hormones affect the immune system, and inflammatory diseases are associated with activation of the hypothalamic-pituitary-adrenal axis, providing evidence of an immune-endocrine interplay. 1 Endogenous Endogenous ADJ JJ Degree=Pos _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 4 steroid steroid ADJ JJ Degree=Pos _ _ _ _ 5 hormones hormone NOUN NNS Number=Plur _ _ _ _ 6 affect affect VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 immune immune ADJ JJ Degree=Pos _ _ _ _ 9 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 13 diseases diseasis NOUN NNS Number=Plur _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 hypothalamic hypothalamic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 pituitary pituitary NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 adrenal adrenal ADJ JJ Degree=Pos _ _ _ _ 25 axis axis NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 providing provid VERB VBG VerbForm=Ger _ _ _ _ 28 evidence evidence NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 immune immune NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 endocrine endocrine NOUN NN Number=Sing _ _ _ _ 34 interplay interplay NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 3296 # text = Function tests in MS have revealed dysregulation of the hypothalamic-pituitary-adrenal system in a substantial proportion of patients. 1 Function function NOUN NN Number=Sing _ _ _ _ 2 tests test NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 MS MS NOUN NNS Number=Plur _ _ _ _ 5 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 dysregulation dysregulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 hypothalamic hypothalamic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 -pituitary-adrenal -pituitary-adrenal ADJ JJ Degree=Pos _ _ _ _ 12 system system NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 substantial substantial ADJ JJ Degree=Pos _ _ _ _ 16 proportion proportion NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3297 # text = We characterized glucocorticoid receptor (GR) binding in peripheral blood lymphocytes from 39 MS patients and 14 age- and sex-matched controls with respect to dissociation constant and binding capacity, using a whole-cell binding assay with [3H]dexamethasone as the ligand. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 characterized characterize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 GR GR NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 11 blood blood NOUN NN Number=Sing _ _ _ _ 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 39 39 NUM CD NumType=Card _ _ _ _ 15 MS MS PROPN NNP Number=Sing _ _ _ _ 16 patients patient NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 14 14 NUM CD NumType=Card _ _ _ _ 19 age age NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 sex sex NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 -matched -matched VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 controls control NOUN NNS Number=Plur _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 respect respect NOUN NN Number=Sing _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 dissociation dissociation NOUN NN Number=Sing _ _ _ _ 29 constant constant NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 binding binde VERB VBG VerbForm=Ger _ _ _ _ 32 capacity capacity NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 using use VERB VBG VerbForm=Ger _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 whole whole NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 binding binding VERB VBG VerbForm=Ger _ _ _ _ 40 assay assay ADV RB _ _ _ _ _ 41 with with ADP IN _ _ _ _ _ 42 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 3H 3H PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 45 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 46 as as ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 3298 # text = GR binding parameters did not differ significantly between patients (Kd 8.98 +/- 1.07 nM, Bmax 183 +/- 29.8 fmol/mg) and controls (Kd 9.36 +/- 1.17 nM, Bmax 158 +/- 16 fmol/mg). 1 GR Gr VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 binding binding VERB VBG VerbForm=Ger _ _ _ _ 3 parameters parameter NOUN NNS Number=Plur _ _ _ _ 4 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 differ differ VERB VB VerbForm=Inf _ _ _ _ 7 significantly significantly ADV RB _ _ _ _ _ 8 between between ADP IN _ _ _ _ _ 9 patients patient NOUN NNS Number=Plur _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 Kd K PROPN NNP Number=Sing _ _ _ _ 12 8.98 8.98 NUM CD NumType=Card _ _ _ _ 13 +/- +/- SYM SYM _ _ _ _ _ 14 1.07 1.07 NUM CD NumType=Card _ _ _ _ 15 nM nm NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 Bmax Bmax PROPN NNP Number=Sing _ _ _ _ 18 183 183 NUM CD NumType=Card _ _ _ _ 19 +/- +/- SYM SYM _ _ _ _ _ 20 29.8 29.8 NUM CD NumType=Card _ _ _ _ 21 fmol fmol NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 / / PUNCT , _ _ _ _ SpaceAfter=No 23 mg mg NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 controls controls NOUN NNS Number=Plur _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 Kd K PROPN NNP Number=Sing _ _ _ _ 29 9.36 9.36 NUM CD NumType=Card _ _ _ _ 30 +/- +/- SYM SYM _ _ _ _ _ 31 1.17 1.17 NUM CD NumType=Card _ _ _ _ 32 nM nm NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 Bmax Bmax PROPN NNP Number=Sing _ _ _ _ 35 158 158 NUM CD NumType=Card _ _ _ _ 36 +/- +/- SYM SYM _ _ _ _ _ 37 16 16 NUM CD NumType=Card _ _ _ _ 38 fmol fmol NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 / / PUNCT , _ _ _ _ SpaceAfter=No 40 mg mg NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3299 # text = No effect of age, sex, course, duration or severity of disease, or prior steroid treatments was detected. 1 No no DET DT _ _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 age age NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 sex sex NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 course course NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 duration duration NOUN NN Number=Sing _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 severity severity NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 prior prior ADJ JJ Degree=Pos _ _ _ _ 18 steroid steroid ADJ JJ Degree=Pos _ _ _ _ 19 treatments treatment NOUN NNS Number=Plur _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3300 # text = GR binding parameters were analyzed in relation to the results of the combined dexamethasone-CRH test, which reflects corticosteroid receptor function at the hypothalamus, in 30 patients and 9 controls. 1 GR Gr VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 binding binding VERB VBG VerbForm=Ger _ _ _ _ 3 parameters parameter NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 relation relation NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 results result NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 CRH CRh NOUN NN Number=Sing _ _ _ _ 17 test test NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 reflects reflect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 corticosteroid corticosteroid ADJ JJ Degree=Pos _ _ _ _ 22 receptor receptor NOUN NN Number=Sing _ _ _ _ 23 function function NOUN NN Number=Sing _ _ _ _ 24 at at ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 hypothalamus hypothalamus NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 30 30 NUM CD NumType=Card _ _ _ _ 30 patients patient NOUN NNS Number=Plur _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 9 9 NUM CD NumType=Card _ _ _ _ 33 controls control NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 3301 # text = While controls showed a moderate correlation between binding affinity of the GR in lymphocytes and regulatory function at the hypothalamic level, the patients did not. 1 While while SCONJ IN _ _ _ _ _ 2 controls control NOUN NNS Number=Plur _ _ _ _ 3 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 moderate moderate ADJ JJ Degree=Pos _ _ _ _ 6 correlation correlation NOUN NN Number=Sing _ _ _ _ 7 between between ADP IN _ _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 affinity affinity NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 GR Gr NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 17 function function NOUN NN Number=Sing _ _ _ _ 18 at at ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 hypothalamic hypothalamic ADJ JJ Degree=Pos _ _ _ _ 21 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 patients patient NOUN NNS Number=Plur _ _ _ _ 25 did do VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 not not PART RB _ _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3302 # text = These data suggest that the physiological relationship between binding and function of the glucocorticoid receptor is disturbed in MS. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 physiological physiological ADJ JJ Degree=Pos _ _ _ _ 7 relationship relationship NOUN NN Number=Sing _ _ _ _ 8 between between ADP IN _ _ _ _ _ 9 binding binding NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 function function NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 15 receptor receptor NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 disturbed distur VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 MS MS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3303 # text = Document 003003438 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003438 003003438 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3304 # text = Molecular mechanisms of steroid action: a novel type of cross-talk between glucocorticoids and NF-kappa B transcription factors. 1 Molecular Molecular ADJ JJ Degree=Pos _ _ _ _ 2 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 steroid steroid NOUN NN Number=Sing _ _ _ _ 5 action action NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 : : PUNCT : _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 novel novel NOUN NN Number=Sing _ _ _ _ 9 type type NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 cross-talk cross-talk NOUN NN Number=Sing _ _ _ _ 12 between between ADP IN _ _ _ _ _ 13 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3305 # text = Despite the widespread use of glucocorticoids in the treatment of diseases characterized by inflammation, the molecular mechanism(s) by which these hormones exert this beneficial effect in patients with asthma remains to be elucidated. 1 Despite despite ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 widespread widespread ADJ JJ Degree=Pos _ _ _ _ 4 use use NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 treatment treatment NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 diseases diseasis NOUN NNS Number=Plur _ _ _ _ 12 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 18 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 s s X AFX _ _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 25 hormones hormone NOUN NNS Number=Plur _ _ _ _ 26 exert exert ADP IN Typo=Yes _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 beneficial beneficial ADJ JJ Degree=Pos _ _ _ _ 29 effect effect NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 patients patient NOUN NNS Number=Plur _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 asthma asthma NOUN NN Number=Sing _ _ _ _ 34 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 be be AUX VB VerbForm=Inf _ _ _ _ 37 elucidated elucidate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 3306 # text = Therefore, we have studied the transcriptional regulation of intercellular adhesion molecule-1 (ICAM-1) as adhesion molecules are likely to play a causal role in inflammation in promoting cell-cell and cell-matrix interactions. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 studied studie VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 8 regulation regulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 intercellular intercellular ADJ JJ Degree=Pos _ _ _ _ 11 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 12 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 X LS _ _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 22 molecules molecule NOUN NNS Number=Plur _ _ _ _ 23 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 likely likely ADJ JJ Degree=Pos _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 play play VERB VB VerbForm=Inf _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 causal causal ADJ JJ Degree=Pos _ _ _ _ 29 role role NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 32 in in SCONJ IN _ _ _ _ _ 33 promoting promote VERB VBG VerbForm=Ger _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 cell cell NOUN NN Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 matrix matrix NOUN NN Number=Sing _ _ _ _ 41 interactions interaction NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3307 # text = We observed that in a monocytic (U937) and a bronchial epithelial (H292) cell-line dexamethasone strongly suppressed basal and induced ICAM-1 expression. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 monocytic monocytic NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 U937 U937 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 bronchial bronchial ADJ JJ Degree=Pos _ _ _ _ 13 epithelial epithelial NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 H292 H292 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 line line NOUN NN Number=Sing _ _ _ _ 20 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 21 strongly strongly ADV RB _ _ _ _ _ 22 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 basal basal NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3308 # text = Subsequent analysis of the human ICAM-1 promoter has revealed that both 12-O-tetradecanoylphorbol 13-acetate (TPA) and tumour necrosis factor-alpha (TNF-alpha) upregulate ICAM-1 expression through the presence of a nuclear factor (NF-kappa B) target sequence (TGGAAATTCC). 1 Subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 both both DET DT _ _ _ _ _ 14 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 O of NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 tetradecanoylphorbol tetradecanoylphorbol NOUN NN Number=Sing _ _ _ _ 19 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 acetate acetate NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 tumour tumour PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 27 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 28 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 alpha alpha NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 upregulate upregulate ADJ JJ Degree=Pos _ _ _ _ 37 ICAM ICAM NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ _ 40 expression expression NOUN NN Number=Sing _ _ _ _ 41 through through ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 presence presence NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 46 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 47 factor factor NOUN NN Number=Sing _ _ _ _ 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 kappa kappa NOUN NN Number=Sing _ _ _ _ 52 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 ) ) PUNCT -RRB- _ _ _ _ _ 54 target target NOUN NN Number=Sing _ _ _ _ 55 sequence sequence NOUN NN Number=Sing _ _ _ _ 56 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 57 TGGAAATTCC TGGAAATTCC NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 3309 # text = No glucocorticoid recognition sequences are present in this promoter region and dexamethasone is still able to repress transcription when the multimerized NF-kappa B sequence is transactivated by TNF-alpha upon transfection in 293 cells. 1 No no DET DT _ _ _ _ _ 2 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ _ 3 recognition recognition NOUN NN Number=Sing _ _ _ _ 4 sequences sequence NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 present presend ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 region region NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 still still ADV RB _ _ _ _ _ 15 able able ADJ JJ Degree=Pos _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 repress repress VERB VB VerbForm=Inf _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 when when ADV WRB PronType=Int _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 multimerized multimerize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ _ 26 sequence sequence NOUN NN Number=Sing _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 transactivated transactivate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 alpha alpha ADV RB _ _ _ _ _ 33 upon upon ADP IN _ _ _ _ _ 34 transfection transfection NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 293 293 NUM CD NumType=Card _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 3310 # text = We propose that direct interaction between the glucocorticoid receptor and nuclear factor-kappa B factors is at least a partial explanation for the effects of this hormone in inflammatory diseases. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 direct direct ADJ JJ Degree=Pos _ _ _ _ 5 interaction interaction NOUN NN Number=Sing _ _ _ _ 6 between between ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 factors factor NOUN NNS Number=Plur _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 at at ADV RB _ _ _ _ _ 19 least least ADV RBS Degree=Sup _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 partial partial ADJ JJ Degree=Pos _ _ _ _ 22 explanation explanation NOUN NN Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 effects effect NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 hormone hormone NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 31 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3311 # text = Document 003003442 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003442 003003442 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3312 # text = Epstein-Barr virus nuclear antigen 2 transactivates latent membrane protein LMP1. 1 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 Barr Barr PROPN NNP Number=Sing _ _ _ _ 4 virus virus NOUN NN Number=Sing _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 7 2 2 NUM CD NumType=Card _ _ _ _ 8 transactivates transactivate NOUN NNS Number=Plur _ _ _ _ 9 latent latent ADJ JJ Degree=Pos _ _ _ _ 10 membrane membrane NOUN NN Number=Sing _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 LMP1 Lmp1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3313 # text = Several lines of evidence are compatible with the hypothesis that Epstein-Barr virus (EBV) nuclear antigen 2 (EBNA-2) or leader protein (EBNA-LP) affects expression of the EBV latent infection membrane protein LMP1. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 lines line NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 evidence evidence NOUN NN Number=Sing _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 compatible compatible ADJ JJ Degree=Pos _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 Barr Barr PROPN NNP Number=Sing _ _ _ _ 14 virus virus NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 antigen antigen NOUN NN Number=Sing _ _ _ _ 20 2 2 NUM CD NumType=Card _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 EBNA EBNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 X LS _ _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 leader leader NOUN NN Number=Sing _ _ _ _ 28 protein protein NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 LP LP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 affects affect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 EBV EBV PROPN NNP Number=Sing _ _ _ _ 39 latent latent ADJ JJ Degree=Pos _ _ _ _ 40 infection infection NOUN NN Number=Sing _ _ _ _ 41 membrane membrane NOUN NN Number=Sing _ _ _ _ 42 protein protein NOUN NN Number=Sing _ _ _ _ 43 LMP1 LMP1 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 3314 # text = We now demonstrate the following. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 now now ADV RB _ _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 following follow VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 6 . . PUNCT . _ _ _ _ _ # sent_id = 3315 # text = (i) Acute transfection and expression of EBNA-2 under control of simian virus 40 or Moloney murine leukemia virus promoters resulted in increased LMP1 expression in P3HR-1-infected Burkitt's lymphoma cells and the P3HR-1 or Daudi cell line. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 i i X LS _ _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 Acute Acute ADJ JJ Degree=Pos _ _ _ _ 5 transfection transfection NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 under under ADP IN _ _ _ _ _ 13 control control NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 simian simian ADJ JJ Degree=Pos _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ _ 17 40 40 NUM CD NumType=Card _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 Moloney Moloney NOUN NN Number=Sing _ _ _ _ 20 murine murine NOUN NN Number=Sing _ _ _ _ 21 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 22 virus virus NOUN NN Number=Sing _ _ _ _ 23 promoters promoter NOUN NNS Number=Plur _ _ _ _ 24 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 LMP1 Lmp1 NUM CD NumType=Card _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 P3HR P3HR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 -infected -infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 Burkitt Burkitt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 's 's PART POS _ _ _ _ _ 36 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 P3HR P3hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 1 1 NUM CD NumType=Card _ _ _ _ 43 or or CCONJ CC _ _ _ _ _ 44 Daudi Daudi PROPN NNP Number=Sing _ _ _ _ 45 cell cell NOUN NN Number=Sing _ _ _ _ 46 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 3316 # text = (ii) Transfection and expression of EBNA-LP alone had no effect on LMP1 expression and did not act synergistically with EBNA-2 to affect LMP1 expression. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 ii ii X LS _ _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 Transfection Transfection NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 LP LP PROPN NNP Number=Sing _ _ _ _ 11 alone alone ADV RB _ _ _ _ _ 12 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 no no DET DT _ _ _ _ _ 14 effect effect NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 LMP1 LMP1 NUM CD NumType=Card _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 act act VERB VB VerbForm=Inf _ _ _ _ 22 synergistically synergistically ADV RB _ _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 affect affect VERB VB VerbForm=Inf _ _ _ _ 29 LMP1 LMP1 NUM CD NumType=Card _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3317 # text = (iii) LMP1 expression in Daudi and P3HR-1-infected cells was controlled at the mRNA level, and EBNA-2 expression in Daudi cells increased LMP1 mRNA. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 iii iii X LS _ _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 LMP1 Lmp1 NUM CD NumType=Card _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 Daudi Daudi PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 P3HR P3hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 -infected -infected ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 at at ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 19 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 Daudi Daudi PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ _ 31 mRNA. mRNA. PROPN NNP Number=Sing _ _ _ _ # sent_id = 3318 # text = (iv) No other EBV genes were required for EBNA-2 transactivation of LMP1 since cotransfection of recombinant EBNA-2 expression vectors and genomic LMP1 DNA fragments enhanced LMP1 expression in the EBV-negative B-lymphoma cell lines BJAB, Louckes, and BL30. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 i i PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 3 v have NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 No no DET DT _ _ _ _ _ 6 other other ADJ JJ Degree=Pos _ _ _ _ 7 EBV Ebv PROPN NNP Number=Sing _ _ _ _ 8 genes gene NOUN NNS Number=Plur _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 LMP1 LMP1 NUM CD NumType=Card _ _ _ _ 18 since since ADP IN _ _ _ _ _ 19 cotransfection cotransfection NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 22 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 vectors vector NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 29 LMP1 LMP1 NUM CD NumType=Card _ _ _ _ 30 DNA dna NOUN NN Number=Sing _ _ _ _ 31 fragments fragment NOUN NNS Number=Plur _ _ _ _ 32 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 LMP1 Lmp1 NUM CD NumType=Card _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 negative negative ADJ JJ Degree=Pos _ _ _ _ 40 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 43 cell cell NOUN NN Number=Sing _ _ _ _ 44 lines line NOUN NNS Number=Plur _ _ _ _ 45 BJAB BJAB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 Louckes Louckes PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 BL30 BL30 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 3319 # text = (v) An EBNA-2-responsive element was found within the -512 to +40 LMP1 DNA since this DNA linked to a chloramphenicol acetyltransferase reporter gene was transactivated by cotransfection with an EBNA-2 expression vector. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 v v NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 10 element element NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 within within ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 - - SYM SYM _ _ _ _ SpaceAfter=No 16 512 512 NUM CD NumType=Card _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 +40 +40 NUM CD NumType=Card _ _ _ _ 19 LMP1 LMP1 NUM CD NumType=Card _ _ _ _ 20 DNA dna NOUN NN Number=Sing _ _ _ _ 21 since since ADP IN _ _ _ _ _ 22 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 23 DNA dna NOUN NN Number=Sing _ _ _ _ 24 linked link VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 28 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 29 reporter reporter NOUN NN Number=Sing _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ _ 31 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 32 transactivated transactivate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 cotransfection cotransfection NOUN NN Number=Sing _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 2 2 NUM CD NumType=Card _ _ _ _ 40 expression expression NOUN NN Number=Sing _ _ _ _ 41 vector vector NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3320 # text = (vi) The EBV type 2 EBNA-2 transactivated LMP1 as well as the EBV type 1 EBNA-2. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 vi vi X LS _ _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 The the DET DT Definite=Def|PronType=Art _ _ _ _ 5 EBV EBV PROPN NNP Number=Sing _ _ _ _ 6 type type NOUN NN Number=Sing _ _ _ _ 7 2 2 NUM CD NumType=Card _ _ _ _ 8 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - SYM SYM _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 transactivated transactivate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 LMP1 Lmp1 PROPN NNP Number=Sing _ _ _ _ 13 as as ADV RB _ _ _ _ _ 14 well well ADV RB Degree=Pos _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 EBV EBV PROPN NNP Number=Sing _ _ _ _ 18 type type NOUN NN Number=Sing _ _ _ _ 19 1 1 NUM CD NumType=Card _ _ _ _ 20 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - SYM SYM _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3321 # text = (vii) Two deletions within the EBNA-2 gene which rendered EBV transformation incompetent did not transactivate LMP1, whereas a transformation-competent EBNA-2 deletion mutant did transactivate LMP1. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 vii vii X LS _ _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 Two two NUM CD NumType=Card _ _ _ _ 5 deletions deletion NOUN NNS Number=Plur _ _ _ _ 6 within within ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 rendered render VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 EBV EBV PROPN NNP Number=Sing _ _ _ _ 15 transformation transformation NOUN NN Number=Sing _ _ _ _ 16 incompetent incompetent NOUN NN Number=Sing _ _ _ _ 17 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 not not PART RB _ _ _ _ _ 19 transactivate transactivate VERB VB VerbForm=Inf _ _ _ _ 20 LMP1 LMP1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 whereas whereas SCONJ IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 transformation transformation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 competent competent NOUN NN Number=Sing _ _ _ _ 27 EBNA EBNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 2 2 NUM CD NumType=Card _ _ _ _ 30 deletion deletion NOUN NN Number=Sing _ _ _ _ 31 mutant mutant NOUN NN Number=Sing _ _ _ _ 32 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 33 transactivate transactivate VERB VB VerbForm=Inf _ _ _ _ 34 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 3322 # text = LMP1 is a potent effector of B-lymphocyte activation and can act synergistically with EBNA-2 to induce cellular CD23 gene expression. 1 LMP1 Lmp1 PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 potent potent NOUN NN Number=Sing _ _ _ _ 5 effector effector NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 B B ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 can can AUX MD VerbForm=Fin _ _ _ _ 13 act act VERB VB VerbForm=Inf _ _ _ _ 14 synergistically synergistically ADV RB _ _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 induce induce VERB VB VerbForm=Inf _ _ _ _ 21 cellular celular ADJ JJ Degree=Pos _ _ _ _ 22 CD23 CD23 NOUN NN Number=Sing _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3323 # text = Thus, EBNA-2 transactivation of LMP1 amplifies the biological impact of EBNA-2 and underscores its central role in EBV-induced growth transformation. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ _ 9 amplifies amplify VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 biological biological ADJ JJ Degree=Pos _ _ _ _ 12 impact impact NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 underscores underscore VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 central central ADJ JJ Degree=Pos _ _ _ _ 21 role role NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 growth growth NOUN NN Number=Sing _ _ _ _ 27 transformation transformation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3324 # text = Document 003003446 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003446 003003446 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3325 # text = Microtubules mediate cellular 25-hydroxyvitamin D3 trafficking and the genomic response to 1,25-dihydroxyvitamin D3 in normal human monocytes. 1 Microtubules Microtubule NOUN NNS Number=Plur _ _ _ _ 2 mediate mediate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 cellular celular ADJ JJ Degree=Pos _ _ _ _ 4 25 25 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 hydroxyvitamin hydroxyvitamin NOUN NN Number=Sing _ _ _ _ 7 D3 D3 NOUN NN Number=Sing _ _ _ _ 8 trafficking trafficking NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 12 response response NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 dihydroxyvitamin dihydroxyvitamin NOUN NN Number=Sing _ _ _ _ 17 D3 D3 NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 normal normal ADJ JJ Degree=Pos _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3326 # text = The genomic actions of 1,25-dihydroxyvitamin D3 (1,25(OH)2D3) are mediated by the intracellular vitamin D receptor (VDR). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 3 actions action NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT : _ _ _ _ SpaceAfter=No 7 dihydroxyvitamin dihydroxyvitamin NOUN NN Number=Sing _ _ _ _ 8 D3 D3 NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 OH Oh INTJ UH _ _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 2D3 2D3 X LS _ _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 21 vitamin vitamin NOUN NN Number=Sing _ _ _ _ 22 D d NOUN NN Number=Sing _ _ _ _ 23 receptor receptor NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 VDR VDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3327 # text = Although immunocytochemistry has shown that disruption of microtubular assembly prevents nuclear access of the sterol-VDR complex, the role of microtubules in the response to 1,25(OH)2D3 has not been studied in viable cells. 1 Although although SCONJ IN _ _ _ _ _ 2 immunocytochemistry immunocytochemistry PROPN NNP Number=Sing _ _ _ _ 3 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 disruption disruption NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 microtubular microtubular ADJ JJ Degree=Pos _ _ _ _ 9 assembly assembly NOUN NN Number=Sing _ _ _ _ 10 prevents prevent NOUN NNS Number=Plur _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 access access NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 sterol sterol NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 VDR Vdr NOUN NN Number=Sing _ _ _ _ 18 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 role role NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 microtubules microtubule NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 response response NOUN NN Number=Sing _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 OH Oh INTJ UH _ _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 2D3 2D3 NOUN NN Number=Sing _ _ _ _ 33 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 not not PART RB _ _ _ _ _ 35 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 36 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 viable viable ADJ JJ Degree=Pos _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 3328 # text = Our studies examined this interaction in normal human monocytes. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 examined examin VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 interaction interaction NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 normal normal ADJ JJ Degree=Pos _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 3329 # text = Monocytes convert 25(OH)D3 to 1,25(OH)2D3 and to 24-hydroxylated metabolites more polar than 1,25(OH)2D3. 1 Monocytes Monocytes PROPN NNP Number=Sing _ _ _ _ 2 convert convert NOUN NN Number=Sing _ _ _ _ 3 25 25 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 7 D3 D3 NUM CD NumType=Card _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 2D3 2D3 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 24 24 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 hydroxylated hydroxylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 metabolites metabolite NOUN NNS Number=Plur _ _ _ _ 20 more more ADV RBR _ _ _ _ _ 21 polar polar ADJ JJ Degree=Pos _ _ _ _ 22 than than ADP IN _ _ _ _ _ 23 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 2D3 2D3 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3330 # text = Microtubule disruption totally abolished the ability of exogenous 1,25(OH)2D3 to suppress its own synthesis and to induce 24-hydroxylase mRNA and activity, without affecting either total 1,25(OH)2D3 uptake or maximal 1,25(OH)2D3-VDR binding. 1 Microtubule Microtubule NOUN NN Number=Sing _ _ _ _ 2 disruption disruption NOUN NN Number=Sing _ _ _ _ 3 totally totally ADV RB _ _ _ _ _ 4 abolished abolish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 ability ability NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 9 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 OH oh INTJ UH _ _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 2D3 2D3 NOUN NN Number=Sing _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 16 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 17 own own ADJ JJ Degree=Pos _ _ _ _ 18 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 induce induce VERB VB VerbForm=Inf _ _ _ _ 22 24 24 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 hydroxylase hydroxylase NOUN NN Number=Sing _ _ _ _ 25 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 without without SCONJ IN _ _ _ _ _ 30 affecting affect VERB VBG VerbForm=Ger _ _ _ _ 31 either either DET DT _ _ _ _ _ 32 total total ADJ JJ Degree=Pos _ _ _ _ 33 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 OH oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 2D3 2D3 NUM CD NumType=Card _ _ _ _ 38 uptake uptake NOUN NN Number=Sing _ _ _ _ 39 or or CCONJ CC _ _ _ _ _ 40 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 41 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 45 2D3 2D3 NUM CD NumType=Card _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 VDR Vdr NOUN NN Number=Sing _ _ _ _ 48 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 3331 # text = Thus, intact microtubules are essential for 1,25(OH)2D3-dependent modulation of gene transcription. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 intact intact ADJ JJ Degree=Pos _ _ _ _ 4 microtubules microtubule NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 essential essential ADJ JJ Degree=Pos _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 2D3 2D3 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 -dependent -dependent ADJ JJ Degree=Pos _ _ _ _ 14 modulation modulation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 gene gene ADJ JJ Degree=Pos _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3332 # text = Interestingly, microtubule disruption also decreased monocyte 1,25(OH)2D3 synthesis, not by decreasing the Vmax of monocyte mitochondrial 1 alpha-hydroxylase but through an increase in the Km for 25(OH)2D3. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 microtubule microtubule ADJ JJ Degree=Pos _ _ _ _ 4 disruption disruption NOUN NN Number=Sing _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 8 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 2D3 2D3 NUM CD NumType=Card _ _ _ _ 13 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 not not ADV RB _ _ _ _ _ 16 by by SCONJ IN _ _ _ _ _ 17 decreasing decrease VERB VBG VerbForm=Ger _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 Vmax Vmax NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 22 mitochondrial mitochondrial NOUN NN Number=Sing _ _ _ _ 23 1 1 NUM CD NumType=Card _ _ _ _ 24 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 hydroxylase hydroxylase NOUN NN Number=Sing _ _ _ _ 27 but but CCONJ CC _ _ _ _ _ 28 through through ADP IN _ _ _ _ _ 29 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 increase increase NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 Km Km PROPN NNP Number=Sing _ _ _ _ 34 for for ADP IN _ _ _ _ _ 35 25 25 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 OH oh INTJ UH _ _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 2D3 2D3 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 3333 # text = We examined 25(OH)D3 transport. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 25 25 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 OH oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 7 D3 D3 NUM CD NumType=Card _ _ _ _ 8 transport transport NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 3334 # text = Microtubule disruption did not affect total cellular 25(OH)D3 uptake but reduced its intracellular trafficking to the mitochondria. 1 Microtubule Microtubule NOUN NN Number=Sing _ _ _ _ 2 disruption disruption NOUN NN Number=Sing _ _ _ _ 3 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 affect affect VERB VB VerbForm=Inf _ _ _ _ 6 total total ADJ JJ Degree=Pos _ _ _ _ 7 cellular celular NOUN NN Number=Sing _ _ _ _ 8 25 25 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 OH oh INTJ UH _ _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 D3 D3 NOUN NN Number=Sing _ _ _ _ 13 uptake uptake NOUN NN Number=Sing _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 17 intracellular intracelular ADJ JJ Degree=Pos _ _ _ _ 18 trafficking traffick NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 mitochondria mitochondria NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3335 # text = Thus, microtubules participate in intracellular 25(OH)D3 transport, and their integrity determines normal 1,25(OH)2D3 synthesis. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 microtubules microtubule NOUN NNS Number=Plur _ _ _ _ 4 participate participate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 7 25 25 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 OH oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 D3 D3 NUM CD NumType=Card _ _ _ _ 12 transport transport NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 integrity integrity NOUN NN Number=Sing _ _ _ _ 17 determines determine VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 normal normal ADJ JJ Degree=Pos _ _ _ _ 19 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 OH oh INTJ UH _ _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 2D3 2D3 NUM CD NumType=Card _ _ _ _ 24 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3336 # text = Document 003003447 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003447 003003447 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3337 # text = Regulation of interferon-gamma gene expression. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 interferon interferon ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 gamma gamma NOUN NN Number=Sing _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3338 # text = Interferon-gamma ( IFN-gamma ), also known as type II interferon, is an important immunoregulatory gene that has multiple effects on the development, maturation, and function of the immune system. 1 Interferon Interferon PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 gamma gamma NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ _ 5 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 gamma gamma NOUN NN Number=Sing _ _ _ _ 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 also also ADV RB _ _ _ _ _ 11 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 type type NOUN NN Number=Sing _ _ _ _ 14 II ii PROPN NNP Number=Sing _ _ _ _ 15 interferon interferon PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 important important ADJ JJ Degree=Pos _ _ _ _ 20 immunoregulatory immunoregulatory ADJ JJ Degree=Pos _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 25 effects effect NOUN NNS Number=Plur _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 maturation maturation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 function function NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 immune immune ADJ JJ Degree=Pos _ _ _ _ 37 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 3339 # text = IFN-gamma mRNA and protein are expressed predominantly by T cells and large granular lymphocytes. 1 IFN- IFN- SYM NFP _ _ _ _ SpaceAfter=No 2 gamma gamma NOUN NN Number=Sing _ _ _ _ 3 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 predominantly predominantly ADV RB _ _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 large large ADJ JJ Degree=Pos _ _ _ _ 14 granular granular ADJ JJ Degree=Pos _ _ _ _ 15 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 3340 # text = The IFN-gamma mRNA is induced/inhibited in these cell types by a wide variety of extracellular signals, thus implicating a number of diverse, yet convergent signal transduction pathways in its transcriptional control. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 gamma gamma NOUN NN Number=Sing _ _ _ _ 5 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 types type NOUN NNS Number=Plur _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 wide wide ADJ JJ Degree=Pos _ _ _ _ 17 variety variety NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 20 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 thus thus ADV RB _ _ _ _ _ 23 implicating implicate VERB VBG VerbForm=Ger _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 number number NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 diverse diverse ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 yet yet CCONJ CC _ _ _ _ _ 30 convergent convergent ADJ JJ Degree=Pos _ _ _ _ 31 signal signal NOUN NN Number=Sing _ _ _ _ 32 transduction transduction NOUN NN Number=Sing _ _ _ _ 33 pathways pathway NOUN NNS Number=Plur _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 36 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 37 control control NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 3341 # text = In this review, I describe how DNA methylation and specific DNA binding proteins may regulate transcription of the IFN-gamma gene in response to extracellular signals. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 review review NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 describe describe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 how how ADV WRB PronType=Int _ _ _ _ 8 DNA dna NOUN NN Number=Sing _ _ _ _ 9 methylation methylation NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 specific specific ADJ JJ Degree=Pos _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 binding binding VERB VBG VerbForm=Ger _ _ _ _ 14 proteins protein NOUN NNS Number=Plur _ _ _ _ 15 may may AUX MD VerbForm=Fin _ _ _ _ 16 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 gamma gamma NOUN NN Number=Sing _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 response response NOUN NN Number=Sing _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 28 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3342 # text = Document 003003449 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003449 003003449 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3343 # text = Signal transduction by DR3, a death domain-containing receptor related to TNFR-1 and CD95. 1 Signal signal ADJ JJ Degree=Pos _ _ _ _ 2 transduction transduction NOUN NN Number=Sing _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 DR3 DR3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 death death NOUN NN Number=Sing _ _ _ _ 8 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 containing containing VERB VBG VerbForm=Ger _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 related related ADJ JJ Degree=Pos _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 TNFR TNFR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 CD95 CD95 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3344 # text = Tumor necrosis factor receptor-1 (TNFR-1) and CD95 (also called Fas or APO-1) are cytokine receptors that engage the apoptosis pathway through a region of intracellular homology, designated the "death domain." 1 Tumor tumor ADP IN _ _ _ _ _ 2 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT : _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 TNFR Tnfr NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 X LS _ _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 CD95 CD95 PROPN NNP Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 also also ADV RB _ _ _ _ _ 16 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 Fas Fas NOUN NNS Number=Plur _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 APO APO NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 X LS _ _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 cytokine cytokine ADJ JJ Degree=Pos _ _ _ _ 25 receptors receptor NOUN NNS Number=Plur _ _ _ _ 26 that that PRON WDT PronType=Rel _ _ _ _ 27 engage engage VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 30 pathway pathway NOUN NN Number=Sing _ _ _ _ 31 through through ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 region region NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 36 homology homology NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 designated designate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 " " PUNCT `` _ _ _ _ SpaceAfter=No 41 death death NOUN NN Number=Sing _ _ _ _ 42 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpaceAfter=No 44 " " PUNCT '' _ _ _ _ _ # sent_id = 3345 # text = Another death domain-containing member of the TNFR family, death receptor 3 (DR3), was identified and was shown to induce both apoptosis and activation of nuclear factor kappaB. 1 Another another DET DT _ _ _ _ _ 2 death death NOUN NN Number=Sing _ _ _ _ 3 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 containing contain VERB VBG VerbForm=Ger _ _ _ _ 6 member member NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 TNFR TNFR PROPN NNP Number=Sing _ _ _ _ 10 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 death death NOUN NN Number=Sing _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ _ 14 3 3 NUM CD NumType=Card _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 DR3 DR3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 induce induce VERB VB VerbForm=Inf _ _ _ _ 26 both both CCONJ CC _ _ _ _ _ 27 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 32 factor factor NOUN NN Number=Sing _ _ _ _ 33 kappaB kappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 3346 # text = Expression of DR3 appears to be restricted to tissues enriched in lymphocytes. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 DR3 DR3 NOUN NN Number=Sing _ _ _ _ 4 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 restricted restrict VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 tissues tissue NOUN NNS Number=Plur _ _ _ _ 10 enriched enrich VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 3347 # text = DR3 signal transduction is mediated by a complex of intracellular signaling molecules including TRADD, TRAF2, FADD, and FLICE. 1 DR3 DR3 NOUN NN Number=Sing _ _ _ _ 2 signal signal NOUN NN Number=Sing _ _ _ _ 3 transduction transduction NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 complex complex NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 intracellular intracelular ADJ JJ Degree=Pos _ _ _ _ 11 signaling signal NOUN NN Number=Sing _ _ _ _ 12 molecules molecule NOUN NNS Number=Plur _ _ _ _ 13 including include VERB VBG VerbForm=Ger _ _ _ _ 14 TRADD tRADd NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 TRAF2 Traf2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 FADD fadd NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 FLICE FLICE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3348 # text = Thus, DR3 likely plays a role in regulating lymphocyte homeostasis. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 DR3 DR3 NUM CD NumType=Card _ _ _ _ 4 likely likely ADV RB _ _ _ _ _ 5 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 in in SCONJ IN _ _ _ _ _ 9 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 10 lymphocyte lymphocyte ADJ JJ Degree=Pos _ _ _ _ 11 homeostasis homeostasis NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3349 # text = Document 003003452 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003452 003003452 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3350 # text = In vivo modulation of glucocorticoid receptor mRNA by inhaled fluticasone propionate in bronchial mucosa and blood lymphocytes in subjects with mild asthma. 1 In in ADP IN _ _ _ _ _ 2 vivo vivo ADJ JJ Degree=Pos _ _ _ _ 3 modulation modulation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 inhaled inhal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 fluticasone fluticasone NOUN NN Number=Sing _ _ _ _ 11 propionate propionate NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 bronchial bronchial ADJ JJ Degree=Pos _ _ _ _ 14 mucosa mucosa NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 blood blood NOUN NN Number=Sing _ _ _ _ 17 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 subjects subject NOUN NNS Number=Plur _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 mild mild ADJ JJ Degree=Pos _ _ _ _ 22 asthma asthma NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3351 # text = BACKGROUND: In vivo regulation of the glucocorticoid receptor (GR) by glucocorticoids provides a means of modulating sensitivity of targeted cells. 1 BACKGROUND background ADP IN _ _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 In in ADP IN _ _ _ _ _ 4 vivo vivo ADJ JJ Degree=Pos _ _ _ _ 5 regulation regulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 GR GR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 15 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 means means NOUN NN Number=Sing _ _ _ _ 18 of of SCONJ IN _ _ _ _ _ 19 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 20 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 targeted target VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3352 # text = OBJECTIVE: 1 OBJECTIVE objective NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 3353 # text = We sought to determine the in vivo modulation of GR mRNA expression by fluticasone propionate (FP) in subjects with mild asthma. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 sought seek VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 determine determine VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 vivo vivo NOUN NN Number=Sing _ _ _ _ 8 modulation modulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 GR GR PROPN NNP Number=Sing _ _ _ _ 11 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 fluticasone fluticasone ADJ JJ Degree=Pos _ _ _ _ 15 propionate propionate NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 FP Fp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 subjects subject NOUN NNS Number=Plur _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 mild mild ADJ JJ Degree=Pos _ _ _ _ 23 asthma asthma NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3354 # text = METHODS: Ten atopic asthmatic subjects were treated with FP 250 microg twice daily for 4 weeks. 1 METHODS method NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Ten ten NUM CD NumType=Card _ _ _ _ 4 atopic atopic ADJ JJ Degree=Pos _ _ _ _ 5 asthmatic asthmatic ADJ JJ Degree=Pos _ _ _ _ 6 subjects subject NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 treated treat VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 FP Fp NOUN NN Number=Sing _ _ _ _ 11 250 250 NUM CD NumType=Card _ _ _ _ 12 microg microg NOUN NN Number=Sing _ _ _ _ 13 twice twice ADV RB NumType=Mult _ _ _ _ 14 daily daily ADV RB _ _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 4 4 NUM CD NumType=Card _ _ _ _ 17 weeks week NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3355 # text = Before and after treatment, the patients underwent fiberoptic bronchoscopy with endobronchial biopsy and sampling of venous blood for measurements of GR mRNA levels. 1 Before before ADP IN _ _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 after after ADP IN _ _ _ _ _ 4 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 patients patient NOUN NNS Number=Plur _ _ _ _ 8 underwent underwent ADJ JJ Degree=Pos _ _ _ _ 9 fiberoptic fiberoptic ADJ JJ Degree=Pos _ _ _ _ 10 bronchoscopy bronchoscopy NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 endobronchial endobronchial ADJ JJ Degree=Pos _ _ _ _ 13 biopsy biopsy NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 sampling sampling NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 venous venous ADJ JJ Degree=Pos _ _ _ _ 18 blood blood NOUN NN Number=Sing _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 measurements measurement NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 GR GR PROPN NNP Number=Sing _ _ _ _ 23 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 24 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3356 # text = A solution hybridization assay was used for quantitative analysis of GR mRNA. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 solution solution NOUN NN Number=Sing _ _ _ _ 3 hybridization hybridization NOUN NN Number=Sing _ _ _ _ 4 assay assay NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 quantitative quantitative ADJ JJ Degree=Pos _ _ _ _ 9 analysis analysis NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 GR GR PROPN NNP Number=Sing _ _ _ _ 12 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 3357 # text = In addition, a 24-hour urinary cortisol excretion and an adrenocorticotropic hormone test before and after treatment with FP were performed. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 24 24 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 hour hour NOUN NN Number=Sing _ _ _ _ 8 urinary urinary ADJ JJ Degree=Pos _ _ _ _ 9 cortisol cortisol NOUN NN Number=Sing _ _ _ _ 10 excretion excretion NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 adrenocorticotropic adrenocorticotropic ADJ JJ Degree=Pos _ _ _ _ 14 hormone hormone NOUN NN Number=Sing _ _ _ _ 15 test test NOUN NN Number=Sing _ _ _ _ 16 before before ADP IN _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 after after ADP IN _ _ _ _ _ 19 treatment treatment NOUN NN Number=Sing _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 FP FP PROPN NNP Number=Sing _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 performed perform VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3358 # text = RESULTS: A high interindividual variation in GR mRNA expression was seen. 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 high high ADJ JJ Degree=Pos _ _ _ _ 5 interindividual interindividual ADJ JJ Degree=Pos _ _ _ _ 6 variation variation NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 GR GR PROPN NNP Number=Sing _ _ _ _ 9 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 3359 # text = However, we detected a significant reduction of the GR mRNA levels in the endobronchial biopsy specimens after FP treatment (36.6 +/- 23.1 and 25.0 +/- 10.9 amol GR mRNA/microg RNA, respectively; P <.01). 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 detected detect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 significant significant ADJ JJ Degree=Pos _ _ _ _ 7 reduction reduction NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 GR GR PROPN NNP Number=Sing _ _ _ _ 11 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 12 levels level NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 endobronchial endobronchial ADJ JJ Degree=Pos _ _ _ _ 16 biopsy biopsy NOUN NN Number=Sing _ _ _ _ 17 specimens specimen NOUN NNS Number=Plur _ _ _ _ 18 after after ADP IN _ _ _ _ _ 19 FP Fp NOUN NN Number=Sing _ _ _ _ 20 treatment treatment NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 36.6 36.6 NUM CD NumType=Card _ _ _ _ 23 +/- +/- SYM SYM _ _ _ _ _ 24 23.1 23.1 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 25.0 25.0 NUM CD NumType=Card _ _ _ _ 27 +/- +/- SYM SYM _ _ _ _ _ 28 10.9 10.9 NUM CD NumType=Card _ _ _ _ 29 amol amol NOUN NN Number=Sing _ _ _ _ 30 GR GR PROPN NNP Number=Sing _ _ _ _ 31 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 / / PUNCT , _ _ _ _ SpaceAfter=No 33 microg microg PROPN NNP Number=Sing _ _ _ _ 34 RNA RNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 37 ; ; PUNCT , _ _ _ _ _ 38 P p PROPN NNP Number=Sing _ _ _ _ 39 < < PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 .01 .01 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3360 # text = In the peripheral blood lymphocytes an even more striking downregulation of the GR by its cognate ligand was documented (30.3 +/- 26.5 and 8.8 +/- 5 amol GR mRNA/microg RNA, respectively; P <.001), possibly reflecting differences in glucocorticoid sensitivity between tissues. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 4 blood blood NOUN NN Number=Sing _ _ _ _ 5 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 even even ADV RB _ _ _ _ _ 8 more more ADV RBR _ _ _ _ _ 9 striking strik VERB VBG VerbForm=Ger _ _ _ _ 10 downregulation downregulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 GR Gr PROPN NNP Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 cognate cognate ADJ JJ Degree=Pos _ _ _ _ 17 ligand ligand NOUN NN Number=Sing _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 documented document VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 30.3 30.3 NUM CD NumType=Card _ _ _ _ 22 +/- +/- SYM SYM _ _ _ _ _ 23 26.5 26.5 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 8.8 8.8 NUM CD NumType=Card _ _ _ _ 26 +/- +/- SYM SYM _ _ _ _ _ 27 5 5 NUM CD NumType=Card _ _ _ _ 28 amol amol NOUN NN Number=Sing _ _ _ _ 29 GR GR PROPN NNP Number=Sing _ _ _ _ 30 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 / / PUNCT , _ _ _ _ SpaceAfter=No 32 microg microg NOUN NN Number=Sing _ _ _ _ 33 RNA RNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 36 ; ; PUNCT , _ _ _ _ _ 37 P P PROPN NNP Number=Sing _ _ _ _ 38 < < PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 .001 .001 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 possibly possibly ADV RB _ _ _ _ _ 43 reflecting reflect VERB VBG VerbForm=Ger _ _ _ _ 44 differences difference NOUN NNS Number=Plur _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 47 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 48 between between ADP IN _ _ _ _ _ 49 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 3361 # text = A small but significant reduction of the 24-hour urinary cortisol excretion was observed (233 +/- 109 and 157 +/- 66 nmol/L, respectively; P <.01), whereas the feedback regulation of glucocorticoid synthesis by means of the hypothalamic-pituitary-adrenal axis as assessed by the adrenocorticotropic hormone test remained normal after treatment with FP. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 small small ADJ JJ Degree=Pos _ _ _ _ 3 but but CCONJ CC _ _ _ _ _ 4 significant significant ADJ JJ Degree=Pos _ _ _ _ 5 reduction reduction NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 24 24 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 hour hour NOUN NN Number=Sing _ _ _ _ 11 urinary urinary ADJ JJ Degree=Pos _ _ _ _ 12 cortisol cortisol NOUN NN Number=Sing _ _ _ _ 13 excretion excretion NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 233 233 NUM CD NumType=Card _ _ _ _ 18 +/- +/- SYM SYM _ _ _ _ _ 19 109 109 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 157 157 NUM CD NumType=Card _ _ _ _ 22 +/- +/- SYM SYM _ _ _ _ _ 23 66 66 NUM CD NumType=Card _ _ _ _ 24 nmol/L nmol/l NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 27 ; ; PUNCT , _ _ _ _ _ 28 P P PROPN NNP Number=Sing _ _ _ _ 29 < < PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 .01 .01 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 whereas whereas SCONJ IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 feedback feedback NOUN NN Number=Sing _ _ _ _ 36 regulation regulation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 39 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 40 by by ADP IN _ _ _ _ _ 41 means means NOUN NNS Number=Plur _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 hypothalamic hypothalamic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 45 -pituitary -pituitary ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 adrenal adrenal ADJ JJ Degree=Pos _ _ _ _ 48 axis axis NOUN NN Number=Sing _ _ _ _ 49 as as SCONJ IN _ _ _ _ _ 50 assessed assess VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 51 by by ADP IN _ _ _ _ _ 52 the the DET DT Definite=Def|PronType=Art _ _ _ _ 53 adrenocorticotropic adrenocorticotropic ADJ JJ Degree=Pos _ _ _ _ 54 hormone hormone NOUN NN Number=Sing _ _ _ _ 55 test test NOUN NN Number=Sing _ _ _ _ 56 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 57 normal normal ADJ JJ Degree=Pos _ _ _ _ 58 after after ADP IN _ _ _ _ _ 59 treatment treatment NOUN NN Number=Sing _ _ _ _ 60 with with ADP IN _ _ _ _ _ 61 FP FP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 62 . . PUNCT . _ _ _ _ _ # sent_id = 3362 # text = CONCLUSION: 1 CONCLUSION conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 3363 # text = The results in this study confirm the potency of the inhaled corticosteroid FP and provide evidence for a considerable tissue-specific interindividual variation in the expression of the GR. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 study study NOUN NN Number=Sing _ _ _ _ 6 confirm confirm VERB VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 potency potency NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 inhaled inhal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 corticosteroid corticosteroid NOUN NN Number=Sing _ _ _ _ 13 FP Fp NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 provide provide VERB VB VerbForm=Inf _ _ _ _ 16 evidence evidence NOUN NN Number=Sing _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 considerable considerable ADJ JJ Degree=Pos _ _ _ _ 20 tissue- tissue- PUNCT , _ _ _ _ SpaceAfter=No 21 specific specific ADJ JJ Degree=Pos _ _ _ _ 22 interindividual interindividual ADJ JJ Degree=Pos _ _ _ _ 23 variation variation NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 GR. GR. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3364 # text = Document 003003454 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003454 003003454 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3365 # text = Multiple NF-ATc isoforms with individual transcriptional properties are synthesized in T lymphocytes. 1 Multiple multiple PROPN NNP Number=Sing _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 ATc ATc PROPN NNP Number=Sing _ _ _ _ 5 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 individual individual ADJ JJ Degree=Pos _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 properties property NOUN NNS Number=Plur _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 synthesized synthesize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3366 # text = The transcription factor NF-ATc that controls gene expression in T lymphocytes and embryonic cardiac cells is expressed in three prominent isoforms. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 ATc ATc PROPN NNP Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 controls control VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 gene gene ADJ JJ Degree=Pos _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 embryonic embryonic ADJ JJ Degree=Pos _ _ _ _ 16 cardiac cardiac ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 three three NUM CD NumType=Card _ _ _ _ 22 prominent prominent ADJ JJ Degree=Pos _ _ _ _ 23 isoforms isoform NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3367 # text = This is due to alternative splice/polyadenylation events that lead to the predominant synthesis of two long isoforms in naive T cells and a shorter NF-ATc isoform in effector T cells. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 due due ADP IN _ _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 6 splice splice NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 polyadenylation polyadenylation NOUN NN Number=Sing _ _ _ _ 9 events event NOUN NNS Number=Plur _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 lead lead VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 predominant predominant ADJ JJ Degree=Pos _ _ _ _ 15 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 two two NUM CD NumType=Card _ _ _ _ 18 long long ADJ JJ Degree=Pos _ _ _ _ 19 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 naive naive ADJ JJ Degree=Pos _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 shorter shorter NOUN NN Number=Sing _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 ATc ATc PROPN NNP Number=Sing _ _ _ _ 30 isoform isoform NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 effector effector NOUN NN Number=Sing _ _ _ _ 33 T t PROPN NNP Number=Sing _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 3368 # text = Whereas the previously described isoform NF-ATc/A contains a relatively short C terminus, the longer isoforms, B and C, span extra C-terminal peptides of 128 and 246 aa, respectively. 1 Whereas whereas SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 isoform isoform NOUN NN Number=Sing _ _ _ _ 6 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 ATc/ Atc/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 A a NOUN NN Number=Sing _ _ _ _ 10 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 relatively relatively ADV RB _ _ _ _ _ 13 short short ADJ JJ Degree=Pos _ _ _ _ 14 C c PROPN NNP Number=Sing _ _ _ _ 15 terminus terminus NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 longer longer ADJ JJR Degree=Cmp _ _ _ _ 19 isoforms isoform NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 B b PROPN NNP Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 C c PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 span span ADJ JJ Degree=Pos _ _ _ _ 26 extra extra ADJ JJ Degree=Pos _ _ _ _ 27 C c NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 30 peptides peptide NOUN NNS Number=Plur _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 128 128 NUM CD NumType=Card _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 246 246 NUM CD NumType=Card _ _ _ _ 35 aa aa NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 3369 # text = We show here that in addition to the strong N-terminal trans-activation domain, TAD-A, which is common to all three NF-ATc isoforms, NF-ATc/C contains a second trans-activation domain, TAD-B, in its C-terminal peptide. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 addition addition NOUN NN Number=Sing _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 strong strong ADJ JJ Degree=Pos _ _ _ _ 10 N- n- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 terminal terminal NOUN NN Number=Sing _ _ _ _ 12 trans- trans- SYM SYM _ _ _ _ SpaceAfter=No 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 TAD tAd NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 which which PRON WDT PronType=Rel _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 common common ADJ JJ Degree=Pos _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 all all DET DT _ _ _ _ _ 25 three three NUM CD NumType=Card _ _ _ _ 26 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 ATc ATc NOUN NN Number=Sing _ _ _ _ 29 isoforms isoform NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 ATc/ ATcith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 34 C C PROPN NNP Number=Sing _ _ _ _ 35 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 38 trans- trans- SYM NFP _ _ _ _ SpaceAfter=No 39 activation activation NOUN NN Number=Sing _ _ _ _ 40 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 TAD tAd NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 48 C- C- NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 50 peptide peptide NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 3370 # text = Various stimuli of T cells that induce the activity of TAD-A also enhance the activity of TAD-B, but, unlike TAD-A, TAD-B remains unphosphorylated by protein from 12-O-tetradecanoyl 12-phorbol 13-acetate-stimulated T cells. 1 Various various ADJ JJ Degree=Pos _ _ _ _ 2 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 induce induce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 TAD TAD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 A A PROPN NNP Number=Sing _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 enhance enhance VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 TAD tAd NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 but but CCONJ CC _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 unlike unlike ADP IN _ _ _ _ _ 26 TAD tAd NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 TAD tAd NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 B b NOUN NN Number=Sing _ _ _ _ 33 remains remains NOUN NNS Number=Plur _ _ _ _ 34 unphosphorylated unphosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 protein protein NOUN NN Number=Sing _ _ _ _ 37 from from ADP IN _ _ _ _ _ 38 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 O of ADP IN Abbr=Yes _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 tetradecanoyl tetradecanoyl NOUN NN Number=Sing _ _ _ _ 43 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 - - PUNCT : _ _ _ _ SpaceAfter=No 45 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 46 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 51 T t PROPN NNP Number=Sing _ _ _ _ 52 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 3371 # text = The shorter C-terminal peptide of isoform NF-ATc/B exerts a suppressive transcriptional effect. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 shorter shorter NOUN NN Number=Sing _ _ _ _ 3 C- C- PUNCT , _ _ _ _ SpaceAfter=No 4 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 5 peptide peptide NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 isoform isoform NOUN NN Number=Sing _ _ _ _ 8 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 ATc/ ATc/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 B b NOUN NN Number=Sing _ _ _ _ 12 exerts exert VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 suppressive suppressive ADJ JJ Degree=Pos _ _ _ _ 15 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 16 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3372 # text = These properties of NF-ATc/B and -C might be of importance for gene regulation in naive T lymphocytes in which NF-ATc/B and -C are predominantly synthesized. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 properties property NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 ATc/B ATc/B PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 C C PROPN NNP Number=Sing _ _ _ _ 10 might might AUX MD VerbForm=Fin _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 importance importance NOUN NN Number=Sing _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 regulation regulation NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 naive naive ADJ JJ Degree=Pos _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 ATc/B ATc/B PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 C C PROPN NNP Number=Sing _ _ _ _ 29 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 predominantly predominantly ADV RB _ _ _ _ _ 31 synthesized synthesize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3373 # text = Document 003003456 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003456 003003456 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3374 # text = Latent membrane protein-1 induces cyclin D2 expression, pRb hyperphosphorylation, and loss of TGF-beta 1-mediated growth inhibition in EBV-positive B cells. 1 Latent Latent ADJ JJ Degree=Pos _ _ _ _ 2 membrane membrane NOUN NN Number=Sing _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 induces induce NOUN NNS Number=Plur _ _ _ _ 7 cyclin cyclin VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 D2 D2 NUM CD NumType=Card _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 pRb pRb NOUN NN Number=Sing _ _ _ _ 12 hyperphosphorylation hyperphosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 loss loss ADP IN _ _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 beta beta NOUN NN Number=Sing _ _ _ _ 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 growth growth NOUN NN Number=Sing _ _ _ _ 24 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 positive positive ADJ JJ Degree=Pos _ _ _ _ 29 B b ADJ JJ Degree=Pos _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3375 # text = The normal cell cycle is regulated by several molecules, such as the tumor-suppressor protein pRb, the G1 cyclins, the cyclin-dependent kinases, and their inhibitors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 normal normal ADJ JJ Degree=Pos _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 cycle cycle NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 several several ADJ JJ Degree=Pos _ _ _ _ 9 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 such such ADJ JJ Degree=Pos _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 tumor tumor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 suppressor suppressor NOUN NN Number=Sing _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 pRb pRb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 G1 g1 NOUN NN Number=Sing _ _ _ _ 22 cyclins cyclin NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 cyclin cyclin NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 28 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 32 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3376 # text = These regulators are targeted by negative growth regulatory signals, such as that provided by TGF-beta. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 regulators regulator NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 targeted target VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 negative negative ADJ JJ Degree=Pos _ _ _ _ 7 growth growth NOUN NN Number=Sing _ _ _ _ 8 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 9 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 such such ADJ JJ Degree=Pos _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 14 provided provide VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3377 # text = Here, we show that the presence of either wild-type EBV or its transforming latent membrane protein-1 (LMP-1) results in the loss of TGF-beta 1-mediated growth inhibition in human B cells. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 presence presence NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 either either CCONJ CC _ _ _ _ _ 10 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 type type NOUN NN Number=Sing _ _ _ _ 13 EBV Ebv NOUN NN Number=Sing _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 transforming transform VERB VBG VerbForm=Ger _ _ _ _ 17 latent latent ADJ JJ Degree=Pos _ _ _ _ 18 membrane membrane NOUN NN Number=Sing _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 -1 -1 NUM CD NumType=Card _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 LMP Lmp NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 results result NOUN NNS Number=Plur _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 loss loss NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 beta beta NOUN NN Number=Sing _ _ _ _ 34 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 growth growth NOUN NN Number=Sing _ _ _ _ 38 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 human human ADJ JJ Degree=Pos _ _ _ _ 41 B b ADJ JJ Degree=Pos _ _ _ _ 42 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 3378 # text = Chemical cross-linking with 125I-labeled TGF-beta 1 showed an essentially normal TGF-beta receptor profile in EBV-positive and EBV-negative Burkitt's lymphoma cell lines, and these receptors were shown to be functional in transducing signals, as evidenced by the TGF-beta 1-mediated modulation of junB gene expression. 1 Chemical Chemical PROPN NNP Number=Sing _ _ _ _ 2 cross cross PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 125I 125I PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 labeled label VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 TGF Tgf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 beta beta NOUN NN Number=Sing _ _ _ _ 11 1 1 NUM CD NumType=Card _ _ _ _ 12 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 essentially essentially ADV RB _ _ _ _ _ 15 normal normal ADJ JJ Degree=Pos _ _ _ _ 16 TGF Tgf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 beta beta NOUN NN Number=Sing _ _ _ _ 19 receptor receptor NOUN NN Number=Sing _ _ _ _ 20 profile profile NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 positive positive ADJ JJ Degree=Pos _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 negative negative ADJ JJ Degree=Pos _ _ _ _ 29 Burkitt Burkitt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 's 's PART POS _ _ _ _ _ 31 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 37 receptors receptor NOUN NNS Number=Plur _ _ _ _ 38 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 39 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 40 to to PART TO _ _ _ _ _ 41 be be AUX VB VerbForm=Inf _ _ _ _ 42 functional functional ADJ JJ Degree=Pos _ _ _ _ 43 in in SCONJ IN _ _ _ _ _ 44 transducing transduce VERB VBG VerbForm=Ger _ _ _ _ 45 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 as as SCONJ IN _ _ _ _ _ 48 evidenced evidence VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 49 by by ADP IN _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 TGF TGF NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 beta beta NOUN NN Number=Sing _ _ _ _ 54 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 55 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 56 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 57 modulation modulation NOUN NN Number=Sing _ _ _ _ 58 of of ADP IN _ _ _ _ _ 59 junB junB PROPN NNP Number=Sing _ _ _ _ 60 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 61 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 62 . . PUNCT . _ _ _ _ _ # sent_id = 3379 # text = However, TGF-beta 1 did not induce dephosphorylation of pRb in EBV (or LMP-1)-positive cells as opposed to EBV-negative cells, suggesting a dichotomy in the TGF-beta 1 signaling pathway leading to separable gene regulatory and growth inhibitory responses. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 beta beta PROPN NNP Number=Sing _ _ _ _ 6 1 1 NUM CD NumType=Card _ _ _ _ 7 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 induce induce VERB VB VerbForm=Inf _ _ _ _ 10 dephosphorylation dephosphorylation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 pRb pRb PROPN NNP Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 EBV EBV PROPN NNP Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 or or CCONJ CC _ _ _ _ _ 17 LMP Lmp NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 positive positive ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 as as SCONJ IN _ _ _ _ _ 25 opposed oppose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 negative negative ADJ JJ Degree=Pos _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 dichotomy dichotomy NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 TGF Tgf NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 beta beta NOUN NN Number=Sing _ _ _ _ 40 1 1 NUM CD NumType=Card _ _ _ _ 41 signaling signal NOUN NN Number=Sing _ _ _ _ 42 pathway pathway NOUN NN Number=Sing _ _ _ _ 43 leading lead VERB VBG VerbForm=Ger _ _ _ _ 44 to to ADP IN _ _ _ _ _ 45 separable separable ADJ JJ Degree=Pos _ _ _ _ 46 gene gene NOUN NN Number=Sing _ _ _ _ 47 regulatory regulatory NOUN NN Number=Sing _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 growth growth NOUN NN Number=Sing _ _ _ _ 50 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 51 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 3380 # text = Furthermore, LMP-1 was found to induce the expression of cyclin D2; normal B cells or EBV-negative Burkitt's lymphoma cells do not express D-type cyclins. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 LMP LMP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 induce induce VERB VB VerbForm=Inf _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 cyclin cyclin NOUN NN Number=Sing _ _ _ _ 14 D2 d2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ; ; PUNCT , _ _ _ _ _ 16 normal normal ADJ JJ Degree=Pos _ _ _ _ 17 B b ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 negative negative ADJ JJ Degree=Pos _ _ _ _ 23 Burkitt Burkitt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 's 's PART POS _ _ _ _ _ 25 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 not not PART RB _ _ _ _ _ 29 express express VERB VB VerbForm=Inf _ _ _ _ 30 D- D- NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 type type NOUN NN Number=Sing _ _ _ _ 32 cyclins cyclin NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3381 # text = Taken together, these data point to a potential mechanism underlying EBV-mediated B cell transformation whereby constitutive induction of key cell cycle regulators by LMP-1 can lead to pRb hyperphosphorylation and uncontrolled cell proliferation. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 data data NOUN NN Number=Sing _ _ _ _ 6 point point VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 potential potential NOUN NN Number=Sing _ _ _ _ 10 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 11 underlying underlying VERB VBG VerbForm=Ger _ _ _ _ 12 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 transformation transformation NOUN NN Number=Sing _ _ _ _ 18 whereby whereby ADP IN _ _ _ _ _ 19 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 20 induction induction NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 key key ADJ JJ Degree=Pos _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 cycle cycle NOUN NN Number=Sing _ _ _ _ 25 regulators regulator NOUN NNS Number=Plur _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 LMP LMP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 can can AUX MD VerbForm=Fin _ _ _ _ 31 lead lead VERB VB VerbForm=Inf _ _ _ _ 32 to to PART TO _ _ _ _ _ 33 pRb pRb VERB VB VerbForm=Inf _ _ _ _ 34 hyperphosphorylation hyperphosphorylation NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 uncontrolled uncontroll ADJ JJ Degree=Pos _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3382 # text = Document 003003457 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003457 003003457 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3383 # text = Cellular and molecular mechanisms of IFN-gamma production induced by IL-2 and IL-12 in a human NK cell line. 1 Cellular cellular ADJ JJ Degree=Pos _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 gamma gamma NOUN NN Number=Sing _ _ _ _ 9 production production NOUN NN Number=Sing _ _ _ _ 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 12 12 NUM CD NumType=Card _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 NK NK PROPN NNP Number=Sing _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3384 # text = Interferon-gamma (IFN-gamma) is an important immunoregulatory protein produced predominantly by T cells and large granular lymphocytes (LGL) in response to different extracellular signals. 1 Interferon Interferon PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 gamma gamma NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 important important ADJ JJ Degree=Pos _ _ _ _ 12 immunoregulatory immunoregulatory ADJ JJ Degree=Pos _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 predominantly predominantly ADV RB _ _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 T T PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 large large ADJ JJ Degree=Pos _ _ _ _ 21 granular granular ADJ JJ Degree=Pos _ _ _ _ 22 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 LGL LGL INTJ UH _ _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 response response NOUN NN Number=Sing _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 different different ADJ JJ Degree=Pos _ _ _ _ 30 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 31 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3385 # text = In particular, two interleukins (ILs), IL-2 and IL-12, have been shown to be potent inducers of IFN-gamma gene expression in both T cells and LGL. 1 In in ADP IN _ _ _ _ _ 2 particular particular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 interleukins interleukin NOUN NNS Number=Plur _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 ILs ILs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 20 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 potent potent ADJ JJ Degree=Pos _ _ _ _ 24 inducers inducer NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 IFN IFN NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 gamma gamma NOUN NN Number=Sing _ _ _ _ 29 gene gene NOUN NN Number=Sing _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 both both DET DT _ _ _ _ _ 33 T t PROPN NNP Number=Sing _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 LGL LGL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3386 # text = Although it has been reported that there are some T cell lines that produce IFN-gamma in response to IL-2 and IL-12 stimulation, there has as yet been no report of a natural killer (NK) cell line that responds in a similar manner. 1 Although although SCONJ IN _ _ _ _ _ 2 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 3 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 there there PRON EX _ _ _ _ _ 8 are be VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 some some DET DT _ _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 lines line NOUN NNS Number=Plur _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 produce produce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 IFN Ifn ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 gamma gamma NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 12 12 NUM CD NumType=Card _ _ _ _ 28 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 there there PRON EX _ _ _ _ _ 31 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 as as SCONJ IN _ _ _ _ _ 33 yet yet CCONJ CC _ _ _ _ _ 34 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 35 no no DET DT _ _ _ _ _ 36 report report NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 natural natural ADJ JJ Degree=Pos _ _ _ _ 40 killer killer NOUN NN Number=Sing _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 NK NK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ _ 44 cell cell NOUN NN Number=Sing _ _ _ _ 45 line line NOUN NN Number=Sing _ _ _ _ 46 that that PRON WDT PronType=Rel _ _ _ _ 47 responds respond VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 50 similar similar ADJ JJ Degree=Pos _ _ _ _ 51 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 3387 # text = In this report we present evidence that the cell line NK3.3 derived from human NK cells, responds to both IL-2 and IL-12, as measured by increases in IFN-gamma and granulocyte-macrophage colony-stimulating factor (GM-CSF) cytoplasmic mRNA and protein expression. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 present present ADJ JJ Degree=Pos _ _ _ _ 6 evidence evidence NOUN NN Number=Sing _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 line line NOUN NN Number=Sing _ _ _ _ 11 NK3.3 NK3.3 NUM CD NumType=Card _ _ _ _ 12 derived derive VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 NK NK PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 responds respond NOUN NNS Number=Plur _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 both both CCONJ CC _ _ _ _ _ 21 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 as as SCONJ IN _ _ _ _ _ 30 measured measure VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 increases increase NOUN NNS Number=Plur _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 gamma gamma NOUN NN Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 41 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 44 factor factor NOUN NN Number=Sing _ _ _ _ 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 ) ) PUNCT -RRB- _ _ _ _ _ 50 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 51 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 52 and and CCONJ CC _ _ _ _ _ 53 protein protein NOUN NN Number=Sing _ _ _ _ 54 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 3388 # text = In addition, when used together IL-2 and IL-12 synergized in the induction of IFN-gamma and GM-CSF and this synergy was attributed to an increased accumulation and stability of the IFN-gamma and GM-CSF mRNAs. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 when when ADV WRB PronType=Int _ _ _ _ 5 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 together together ADV RB _ _ _ _ _ 7 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 12 12 NUM CD NumType=Card _ _ _ _ 14 synergized synergize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 induction induction NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 gamma gamma PROPN NNP Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 CSF CSF PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 synergy synergy NOUN NN Number=Sing _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 attributed attribute VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 stability stability NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 gamma gamma PROPN NNP Number=Sing _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 CSF CSF PROPN NNP Number=Sing _ _ _ _ 46 mRNAs mRNA PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 3389 # text = To investigate the signaling pathways involved in the gene induction, five inhibitors, cyclosporin A (CsA), transforming growth factor-beta, cycloheximide, genistein, and staurosporine A, were used in analyzing the effects of IL-2 and IL-12 on NK3.3 cells. 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 signaling signaling NOUN NN Number=Sing _ _ _ _ 5 pathways pathway NOUN NNS Number=Plur _ _ _ _ 6 involved involved ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 five five NUM CD NumType=Card _ _ _ _ 13 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 16 A a NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 CsA csa NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 transforming transforming VERB VBG VerbForm=Ger _ _ _ _ 22 growth growth NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 genistein genistein NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 staurosporine staurosporine NOUN NN Number=Sing _ _ _ _ 33 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 in in SCONJ IN _ _ _ _ _ 38 analyzing analyze VERB VBG VerbForm=Ger _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 effects effect NOUN NNS Number=Plur _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 2 2 NUM CD NumType=Card _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 12 12 NUM CD NumType=Card _ _ _ _ 49 on on ADP IN _ _ _ _ _ 50 NK3.3 NK3.3 NUM CD NumType=Card _ _ _ _ 51 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 3390 # text = The results suggest that activation of protein kinase C, but not new protein synthesis, is required for IL-2 induction of IFN-gamma and GM-CSF cytoplasmic mRNA. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 kinase kinase NOUN NN Number=Sing _ _ _ _ 9 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 not not ADV RB _ _ _ _ _ 13 new new ADJ JJ Degree=Pos _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 induction induction NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 gamma gamma PROPN NNP Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 CSF CSF PROPN NNP Number=Sing _ _ _ _ 32 cytoplasmic cytoplasmic PROPN NNP Number=Sing _ _ _ _ 33 mRNA mRNa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 3391 # text = In contrast, IL-12 induction of IFN-gamma cytoplasmic mRNA appears to only partially depend on activation of protein kinase C. Furthermore, both transforming growth factor-beta and genistein, a tyrosine kinase inhibitor, could suppress IL-2 and IL-12 signaling but CsA was generally inactive. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 12 12 NUM CD NumType=Card _ _ _ _ 7 induction induction NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 gamma gamma X FW Foreign=Yes _ _ _ _ 12 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 13 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 14 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 only only ADV RB _ _ _ _ _ 17 partially partially ADV RB _ _ _ _ _ 18 depend depend VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 kinase kinase NOUN NN Number=Sing _ _ _ _ 24 C. c. PROPN NNP Number=Sing _ _ _ _ 25 Furthermore Furthermore PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 both both CCONJ CC _ _ _ _ _ 28 transforming transform VERB VBG VerbForm=Ger _ _ _ _ 29 growth growth NOUN NN Number=Sing _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 beta beta NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 genistein genistein NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 38 kinase kinase NOUN NN Number=Sing _ _ _ _ 39 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 could could AUX MD VerbForm=Fin _ _ _ _ 42 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 43 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 2 2 NUM CD NumType=Card _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 12 12 NUM CD NumType=Card _ _ _ _ 50 signaling signaling NOUN NN Number=Sing _ _ _ _ 51 but but CCONJ CC _ _ _ _ _ 52 CsA csa PROPN NNP Number=Sing _ _ _ _ 53 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 54 generally generally ADV RB _ _ _ _ _ 55 inactive inactive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 3392 # text = It also was observed that suppression of cytokine gene expression by these agents was independent of the inhibition of proliferation. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 suppression suppression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 13 agents agent NOUN NNS Number=Plur _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 independent independent ADJ JJ Degree=Pos _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3393 # text = In addition, IL-2 but not IL-12 induced nuclear factors NF-kappa B and AP1, and regulation of the nuclear levels of these two DNA binding protein complexes is correlated with IFN-gamma and GM-CSF gene expression. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 but but CCONJ CC _ _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - SYM SYM _ _ _ _ SpaceAfter=No 11 12 12 NUM CD NumType=Card _ _ _ _ 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 factors factor NOUN NNS Number=Plur _ _ _ _ 15 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B b PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 AP1 Ap1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 regulation regulation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 27 levels level NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 30 two two NUM CD NumType=Card _ _ _ _ 31 DNA dna NOUN NN Number=Sing _ _ _ _ 32 binding binde VERB VBG VerbForm=Ger _ _ _ _ 33 protein protein NOUN NN Number=Sing _ _ _ _ 34 complexes complex NOUN NNS Number=Plur _ _ _ _ 35 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 correlated correlate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 gamma gamma PROPN NNP Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 CSF CSF PROPN NNP Number=Sing _ _ _ _ 45 gene gene NOUN NN Number=Sing _ _ _ _ 46 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 3394 # text = These data indicate that IL-2 and IL-12 may have distinct signaling pathways leading to the induction of IFN-gamma and GM-CSF gene expression, and that the NK3.3 cell line may serve as a novel model for dissecting the biochemical and molecular events involved in these pathways. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 12 12 NUM CD NumType=Card _ _ _ _ 12 may may AUX MD VerbForm=Fin _ _ _ _ 13 have have VERB VB VerbForm=Inf _ _ _ _ 14 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 15 signaling signaling NOUN NN Number=Sing _ _ _ _ 16 pathways pathway NOUN NNS Number=Plur _ _ _ _ 17 leading lead VERB VBG VerbForm=Ger _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 induction induction NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 gamma gamma PROPN NNP Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 CSF CSF PROPN NNP Number=Sing _ _ _ _ 29 gene gene NOUN NN Number=Sing _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 that that SCONJ IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 NK3.3 NK3.3 NOUN NN Number=Sing _ _ _ _ 36 cell cell NOUN NN Number=Sing _ _ _ _ 37 line line NOUN NN Number=Sing _ _ _ _ 38 may may AUX MD VerbForm=Fin _ _ _ _ 39 serve serve VERB VB VerbForm=Inf _ _ _ _ 40 as as ADP IN _ _ _ _ _ 41 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 novel novel NOUN NN Number=Sing _ _ _ _ 43 model model NOUN NN Number=Sing _ _ _ _ 44 for for SCONJ IN _ _ _ _ _ 45 dissecting dissect VERB VBG VerbForm=Ger _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 50 events event NOUN NNS Number=Plur _ _ _ _ 51 involved involved ADJ JJ Degree=Pos _ _ _ _ 52 in in ADP IN _ _ _ _ _ 53 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 54 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3395 # text = Document 003003458 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003458 003003458 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3396 # text = Jeg-3 human choriocarcinoma-induced immunosuppression: downregulation of interleukin-2, interleukin-2 receptor alpha-chain, and its Jak/Stat signaling pathway. 1 Jeg Jeg PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 3 3 NUM CD NumType=Card _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 choriocarcinoma choriocarcinoma NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 -induced -induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 immunosuppression immunosuppression NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 : : PUNCT : _ _ _ _ _ 9 downregulation downregulation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 receptor receptor NOUN NN Number=Sing _ _ _ _ 19 alpha- alpha- SYM SYM _ _ _ _ SpaceAfter=No 20 chain chain NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 Jak Jak PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 / / PUNCT , _ _ _ _ SpaceAfter=No 26 Stat Stat PROPN NNP Number=Sing _ _ _ _ 27 signaling signale VERB VBG VerbForm=Ger _ _ _ _ 28 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3397 # text = PROBLEM: The mechanisms of the immunosuppressive and immunosuppression-inducing capacities of Jeg-3 human choriocarcinoma cell line supernatants (HCSs) are not yet completely understood. 1 PROBLEM problem NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 The the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 immunosuppression immunosuppression NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 12 capacities capacitie NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 Jeg Jeg PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 3 3 NUM CD NumType=Card _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 choriocarcinoma choriocarcinoma NOUN NN Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 line line NOUN NN Number=Sing _ _ _ _ 21 supernatants supernatant NOUN NNS Number=Plur _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 HCSs HCS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 not not PART RB _ _ _ _ _ 27 yet yet ADV RB _ _ _ _ _ 28 completely completely ADV RB _ _ _ _ _ 29 understood understand VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3398 # text = The influence on interleukin (IL)-2, IL-4 and interferon (IFN)-gamma production; IL-2 receptor (IL-2R) alpha-, beta-, and gamma-chain; and the signaling pathway molecules Janus kinase (Jak)1, Jak3, signal transducers and activators of transcription (Stat)1, Stat3, and Stat5 should be investigated. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 influence influence NOUN NN Number=Sing _ _ _ _ 3 on on ADP IN _ _ _ _ _ 4 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 4 4 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 interferon interferon NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 - - PUNCT : _ _ _ _ SpaceAfter=No 20 gamma gamma NOUN NN Number=Sing _ _ _ _ 21 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ; ; PUNCT , _ _ _ _ _ 23 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ _ 26 receptor receptor NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 2R 2R PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT : _ _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT , _ _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 chain chain NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 ; ; PUNCT , _ _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 46 pathway pathway NOUN NN Number=Sing _ _ _ _ 47 molecules molecule NOUN NNS Number=Plur _ _ _ _ 48 Janus Janus CCONJ CC _ _ _ _ _ 49 kinase kinase NOUN NN Number=Sing _ _ _ _ 50 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 51 Jak Jak PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 53 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 54 , , PUNCT , _ _ _ _ _ 55 Jak3 Jak3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 , , PUNCT , _ _ _ _ _ 57 signal signal NOUN NN Number=Sing _ _ _ _ 58 transducers transducer NOUN NNS Number=Plur _ _ _ _ 59 and and CCONJ CC _ _ _ _ _ 60 activators activator NOUN NNS Number=Plur _ _ _ _ 61 of of ADP IN _ _ _ _ _ 62 transcription transcription NOUN NN Number=Sing _ _ _ _ 63 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 64 Stat Stat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 65 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 66 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 67 , , PUNCT , _ _ _ _ _ 68 Stat3 Stat3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 69 , , PUNCT , _ _ _ _ _ 70 and and CCONJ CC _ _ _ _ _ 71 Stat5 Stat5 PROPN NNP Number=Sing _ _ _ _ 72 should should AUX MD VerbForm=Fin _ _ _ _ 73 be be AUX VB VerbForm=Inf _ _ _ _ 74 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 75 . . PUNCT . _ _ _ _ _ # sent_id = 3399 # text = METHOD OF STUDY: 1 METHOD method NOUN NN Number=Sing _ _ _ _ 2 OF of ADP IN _ _ _ _ _ 3 STUDY study PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ # sent_id = 3400 # text = For assessment of IL production, whole peripheral venous blood from healthy donors was stimulated with phorbol-myristate-acetate and ionomycine. 1 For for ADP IN _ _ _ _ _ 2 assessment assessment NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 IL Il PROPN NNP Number=Sing _ _ _ _ 5 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 whole whole ADJ JJ Degree=Pos _ _ _ _ 8 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 9 venous venous ADJ JJ Degree=Pos _ _ _ _ 10 blood blood NOUN NN Number=Sing _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 13 donors donor NOUN NNS Number=Plur _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 phorbol phorbol NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 myristate myristate NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 acetate acetate NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 ionomycine ionomycine NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3401 # text = Secretion of ILs was blocked with monensine. 1 Secretion Secretion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 ILs ILs PROPN NNP Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 monensine monensine NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 3402 # text = Intracellular ILs were analyzed by flow cytometry. 1 Intracellular Intracellular ADJ JJ Degree=Pos _ _ _ _ 2 ILs IL NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 flow flow NOUN NN Number=Sing _ _ _ _ 7 cytometry cytometry NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 3403 # text = For IL-2R and signaling pathway molecule analysis, peripheral blood lymphocytes were stimulated with phytohemagglutinin (PHA). 1 For for ADP IN _ _ _ _ _ 2 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 R r NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 8 pathway pathway NOUN NN Number=Sing _ _ _ _ 9 molecule molecule NOUN NN Number=Sing _ _ _ _ 10 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 13 blood blood NOUN NN Number=Sing _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 phytohemagglutinin phytohemagglutinin NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 PHA PHA NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3404 # text = IL-2R chains were measured by flow cytometry, and Jaks/Stats by sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) and Western blot. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 R r ADJ JJR Degree=Cmp _ _ _ _ 5 chains chain NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 measured measure VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 flow flow NOUN NN Number=Sing _ _ _ _ 10 cytometry cytometry NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 Jaks Jak PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 Stats Stat PROPN NNPS Number=Plur _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 sodium sodium NOUN NN Number=Sing _ _ _ _ 18 dodecyl dodecyl NOUN NN Number=Sing _ _ _ _ 19 sulfate sulfate NOUN NN Number=Sing _ _ _ _ 20 polyacrylamide polyacrylamide NOUN NN Number=Sing _ _ _ _ 21 gel gel NOUN NN Number=Sing _ _ _ _ 22 electrophoresis electrophoresis NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 SDS sDs NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 PAGE page NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 Western western ADJ JJ Degree=Pos _ _ _ _ 30 blot blot NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3405 # text = RESULTS: Phorbol-myristate-acetate and ionomycine strongly increase the percent-age of IL-2+ cells; an additional 50% HCSs significantly suppresses the percentage to, or below the level of unstimulated cells. 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Phorbol Phorbol NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 myristate myristate NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 acetate acetate NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 ionomycine ionomycine PRON PRP _ _ _ _ _ 10 strongly strongly ADV RB _ _ _ _ _ 11 increase increase VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 percent percent NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 age age NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 + + SYM SYM _ _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 ; ; PUNCT , _ _ _ _ _ 23 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 additional additional ADJ JJ Degree=Pos _ _ _ _ 25 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 % % SYM NN Number=Sing _ _ _ _ 27 HCSs HCSs PROPN NNPS Number=Plur _ _ _ _ 28 significantly significantly ADV RB _ _ _ _ _ 29 suppresses suppress VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 percentage percentage NOUN NN Number=Sing _ _ _ _ 32 to to ADP IN _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 or or CCONJ CC _ _ _ _ _ 35 below below ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 level level NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 3406 # text = IFN-gamma production is strongly decreased by HCSs in some cases, but not in others. 1 IFN Ifn ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 gamma gamma NOUN NN Number=Sing _ _ _ _ 4 production production NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 strongly strongly ADV RB _ _ _ _ _ 7 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 HCSs HCS NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 some some DET DT _ _ _ _ _ 12 cases case NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 not not ADV RB _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 others other NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3407 # text = PHA stimulates IL-2R alpha-, beta-, and gamma-chain expression and their signaling pathway molecules Jak1, Jak3, Stat1, Stat3, and Stat5. 1 PHA PHA PROPN NNP Number=Sing _ _ _ _ 2 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2R 2R PROPN NNP Number=Sing _ _ _ _ 6 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 chain chain NOUN NN Number=Sing _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 signaling signaling NOUN NN Number=Sing _ _ _ _ 20 pathway pathway NOUN NN Number=Sing _ _ _ _ 21 molecules molecule NOUN NNS Number=Plur _ _ _ _ 22 Jak1 Jak1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 Jak3 Jak3 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 Stat1 stat1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 Stat3 Stat3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 Stat5 Stat5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3408 # text = 50% HCS downregulates the alpha-chain and slightly upregulates the beta-chain. 1 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 % % SYM NN Number=Sing _ _ _ _ 3 HCS HCS PROPN NNP Number=Sing _ _ _ _ 4 downregulates downregulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 alpha- alpha- SYM NFP _ _ _ _ SpaceAfter=No 7 chain chain NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 slightly slightly ADV RB _ _ _ _ _ 10 upregulates upregulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 chain chain NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3409 # text = Jak1, Jak3, Stat1, Stat3, and Stat5 expression is suppressed approximately to, or below the level of unstimulated cells. 1 Jak1 Jak1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Jak3 Jak3 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 Stat1 stat1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 Stat3 Stat3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 Stat5 Stat5 NUM CD NumType=Card _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 approximately approximately ADV RB _ _ _ _ _ 15 to to ADP IN _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 below below ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 level level NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3410 # text = CONCLUSIONS: HCS forcefully blocks the production of IL-2; the IL-2R alpha-chain; and Jak1, Jak3, Stat1, Stat3, and Stat5 expression. 1 CONCLUSIONS conclusion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 HCS Hc NOUN NNS Number=Plur _ _ _ _ 4 forcefully forcefully ADV RB _ _ _ _ _ 5 blocks block VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 production production NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ; ; PUNCT , _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2R 2r NOUN NN Number=Sing _ _ _ _ 17 alpha- alpha- PUNCT : _ _ _ _ SpaceAfter=No 18 chain chain NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ; ; PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 Jak1 Jak1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 Jak3 Jak3 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 Stat1 stat1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 Stat3 Stat3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 Stat5 Stat5 NUM CD NumType=Card _ _ _ _ 31 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3411 # text = The observed phenomena might be caused by downregulation of an IL-2R regulation gene, and might play a key role in the expansion of choriocarcinoma, and possibly in the survival of the fetal allograft. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 observed observed ADJ JJ Degree=Pos _ _ _ _ 3 phenomena phenomena NOUN NN Number=Sing _ _ _ _ 4 might might AUX MD VerbForm=Fin _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 caused cause VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 downregulation downregulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2R 2R PROPN NNP Number=Sing _ _ _ _ 14 regulation regulation NOUN NN Number=Sing _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 might might AUX MD VerbForm=Fin _ _ _ _ 19 play play VERB VB VerbForm=Inf _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 key key ADJ JJ Degree=Pos _ _ _ _ 22 role role NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 expansion expansion NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 choriocarcinoma choriocarcinoma NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 possibly possibly ADV RB _ _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 survival survival NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 37 allograft allograft NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3412 # text = Document 003003459 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003459 003003459 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3413 # text = Signal transduction through interferon-gamma receptor on human eosinophils. 1 Signal signal ADJ JJ Degree=Pos _ _ _ _ 2 transduction transduction NOUN NN Number=Sing _ _ _ _ 3 through through ADP IN _ _ _ _ _ 4 interferon interferon ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 gamma gamma NOUN NN Number=Sing _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3414 # text = BACKGROUND: 1 BACKGROUND background NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 3415 # text = We reported on the constitutive interferon-gamma receptor (IFN-gammaR) expression on eosinophils. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 on on ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 6 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 gamma gamma NOUN NN Number=Sing _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 gammaR gammar NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3416 # text = But signal transduction through IFN-gammaR on eosinophils remains to be elucidated. 1 But but CCONJ CC _ _ _ _ _ 2 signal signal VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 3 transduction transduction NOUN NN Number=Sing _ _ _ _ 4 through through ADP IN _ _ _ _ _ 5 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 gammaR gammar NOUN NN Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ _ 10 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 elucidated elucidate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 3417 # text = In this study, we examined the involvement of the Jak/Stat pathway in the signaling of eosinophils after IFN-gammaR conjugation by the ligand binding. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 involvement involvement NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 Jak Jak PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 Stat Stat PROPN NNP Number=Sing _ _ _ _ 14 pathway pathway NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 signaling signaling NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ _ 20 after after ADP IN _ _ _ _ _ 21 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 gammaR gammaR PROPN NNP Number=Sing _ _ _ _ 24 conjugation conjugation NOUN NN Number=Sing _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 ligand ligand NOUN NN Number=Sing _ _ _ _ 28 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3418 # text = METHODS: Purified peripheral eosinophils were stimulated with IFN-gamma at 37 degrees C for 1-60 min. 1 METHODS method NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Purified Purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 5 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 IFN IFN NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 gamma gamma NOUN NN Number=Sing _ _ _ _ 12 at at ADP IN _ _ _ _ _ 13 37 37 NUM CD NumType=Card _ _ _ _ 14 degrees degree NOUN NNS Number=Plur _ _ _ _ 15 C C PROPN NNP Number=Sing _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - SYM SYM _ _ _ _ SpaceAfter=No 19 60 60 NUM CD NumType=Card _ _ _ _ 20 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3419 # text = Tyrosine phosphorylation of IFN-gammaR, Jak1, Jak2, and Stat1alpha was examined by immunoblotting. 1 Tyrosine Tyrosine NOUN NN Number=Sing _ _ _ _ 2 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 gammaR gammaR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 Jak1 Jak1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 Jak2 jak2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 Stat1 stat1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 alpha alpha PROPN NNP Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by SCONJ IN _ _ _ _ _ 18 immunoblotting immunoblott VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3420 # text = Gel-shift assay was also examined to show the formation of Stat1alpha-DNA complexes. 1 Gel gel NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assay assay NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 show show VERB VB VerbForm=Inf _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 formation formation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Stat1 Stat1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 DNA dna NOUN NN Number=Sing _ _ _ _ 17 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3421 # text = RESULTS: We show that binding of IFN-gamma to human eosinophils initiated a series of events that resulted in the rapid tyrosine phosphorylation of not only the IFN-gammaRalpha chain but also Jak1, Jak2, and Stat1alpha. 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 gamma gamma NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ _ 14 initiated initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 series series NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 events event NOUN NNS Number=Plur _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 24 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 25 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 not not ADV RB _ _ _ _ _ 28 only only ADV RB _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 gammaRalpha gammaRalpha PROPN NNP Number=Sing _ _ _ _ 33 chain chain NOUN NN Number=Sing _ _ _ _ 34 but but CCONJ CC _ _ _ _ _ 35 also also ADV RB _ _ _ _ _ 36 Jak1 Jak1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 Jak2 Jak2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 Stat1 Stat1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 3422 # text = In addition, IFN-gamma enhanced the DNA-binding activity of Stat1alpha. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 IFN IFN NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 gamma gamma NOUN NN Number=Sing _ _ _ _ 7 enhanced enhance VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 Stat1 Stat1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 3423 # text = CONCLUSION: 1 CONCLUSION conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 3424 # text = These data indicate that IFN-gamma affects eosinophils through its specific receptor and utilizes the Jak/Stat pathway as its mode of signaling. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 gamma gamma NOUN NN Number=Sing _ _ _ _ 8 affects affect NOUN NNS Number=Plur _ _ _ _ 9 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ _ 10 through through ADP IN _ _ _ _ _ 11 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 utilizes utilize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 Jak Jak PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 / / PUNCT , _ _ _ _ SpaceAfter=No 19 Stat Stat PROPN NNP Number=Sing _ _ _ _ 20 pathway pathway NOUN NN Number=Sing _ _ _ _ 21 as as SCONJ IN _ _ _ _ _ 22 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 23 mode mode NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3425 # text = Document 003003462 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003462 003003462 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3426 # text = Ras oncogene transformation of human B lymphoblasts is associated with lymphocyte activation and with a block of differentiation. 1 Ras Ras AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 2 oncogene oncogene ADJ JJ Degree=Pos _ _ _ _ 3 transformation transformation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 lymphoblasts lymphoblast NOUN NNS Number=Plur _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 block block NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3427 # text = The p21ras small GTP binding proteins participate in signal transduction from cell surface receptors and affect neoplastic transformation and development in many different cell types. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 p21ras p21ra NOUN NNS Number=Plur _ _ _ _ 3 small small ADJ JJ Degree=Pos _ _ _ _ 4 GTP Gtp NOUN NN Number=Sing _ _ _ _ 5 binding bind VERB VBG VerbForm=Ger _ _ _ _ 6 proteins protein NOUN NNS Number=Plur _ _ _ _ 7 participate participate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 signal signal NOUN NN Number=Sing _ _ _ _ 10 transduction transduction NOUN NN Number=Sing _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 surface surface NOUN NN Number=Sing _ _ _ _ 14 receptors receptor NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 affect affect ADJ JJ Degree=Pos _ _ _ _ 17 neoplastic neoplastic ADJ JJ Degree=Pos _ _ _ _ 18 transformation transformation NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 development development NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 many many ADJ JJ Degree=Pos _ _ _ _ 23 different different ADJ JJ Degree=Pos _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3428 # text = In the present study, we examined the relationship between ras transformation and differentiation of human B lymphocytes. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 relationship relationship NOUN NN Number=Sing _ _ _ _ 10 between between ADP IN _ _ _ _ _ 11 ras ras NOUN NN Number=Sing _ _ _ _ 12 transformation transformation NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3429 # text = We show that the constitutive expression of the T24 Ha-ras oncogene in EBV-immortalized B lymphoblasts was associated with the induction of the interleukin 2 receptor alpha subunit, with an impaired immunoglobulin gene expression, altered adhesion properties and increased survival in serum-free medium. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 T24 t24 NUM CD NumType=Card _ _ _ _ 10 Ha- Ha- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ras ra NOUN NNS Number=Plur _ _ _ _ 12 oncogene oncogene ADV RB _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 immortalized immortalize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 lymphoblasts lymphoblast NOUN NNS Number=Plur _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 induction induction NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 27 2 2 NUM CD NumType=Card _ _ _ _ 28 receptor receptor NOUN NN Number=Sing _ _ _ _ 29 alpha alpha ADP IN _ _ _ _ _ 30 subunit subunit NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 impaired impaire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 36 gene gene NOUN NN Number=Sing _ _ _ _ 37 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 altered alter VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 41 properties property NOUN NNS Number=Plur _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 survival survival NOUN NN Number=Sing _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 serum serum NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 free free ADJ JJ Degree=Pos _ _ _ _ 49 medium medium NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 3430 # text = Since induction of the IL-2 receptor alpha subunit is a hallmark of lymphocyte activation, we suggest that p21ras naturally triggers B cell activation. 1 Since since ADP IN _ _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 alpha alpha NOUN NN Number=Sing _ _ _ _ 10 subunit subunit NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 hallmark hallmark NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 19 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 21 p21ras p21ras AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 naturally naturally ADV RB _ _ _ _ _ 23 triggers trigger NOUN NNS Number=Plur _ _ _ _ 24 B b ADJ JJ Degree=Pos _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3431 # text = The ras-transformed lymphocytes displayed a fully functional IL-2r, as assessed by c-fos induction following treatment with IL-2; nevertheless, they were not growth stimulated by this lymphokine. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ras ra NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 6 displayed display VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 fully fully ADV RB _ _ _ _ _ 9 functional functional ADJ JJ Degree=Pos _ _ _ _ 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2r 2r NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 as as SCONJ IN _ _ _ _ _ 15 assessed assess VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 fos fos NOUN NN Number=Sing _ _ _ _ 20 induction induction NOUN NN Number=Sing _ _ _ _ 21 following follow VERB VBG VerbForm=Ger _ _ _ _ 22 treatment treatment NOUN NN Number=Sing _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ; ; PUNCT , _ _ _ _ _ 28 nevertheless nevertheless ADV RB _ _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 31 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 not not PART RB _ _ _ _ _ 33 growth growth ADV RB _ _ _ _ _ 34 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 37 lymphokine lymphokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 3432 # text = The decreased expression of immunoglobulin genes indicates that the ras oncogene blocks terminal differentiation to plasma cells, possibly by inhibiting the activity of lymphocyte-specific transcription factors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 6 genes gene NOUN NNS Number=Plur _ _ _ _ 7 indicates indicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 ras ra NOUN NNS Number=Plur _ _ _ _ 11 oncogene oncogene PRON PRP _ _ _ _ _ 12 blocks block NOUN NNS Number=Plur _ _ _ _ 13 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 14 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 plasma plasma NOUN NN Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 possibly possibly ADV RB _ _ _ _ _ 20 by by SCONJ IN _ _ _ _ _ 21 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 specific specific ADJ JJ Degree=Pos _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3433 # text = Somewhat unexpectedly, the constitutive p21ras activity did not cause an increased DNA binding of transcription factors PEA1 (AP1), PEA3, Oct-2 or NF-kB. 1 Somewhat somewhat ADV RB _ _ _ _ _ 2 unexpectedly unexpectedly ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 6 p21ras p21ras NOUN NNS Number=Plur _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 cause cause VERB VB VerbForm=Inf _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 DNA dna NOUN NN Number=Sing _ _ _ _ 14 binding binding VERB VBG VerbForm=Ger _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factors factor NOUN NNS Number=Plur _ _ _ _ 18 PEA1 PEA1 PROPN NNP Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 AP1 AP1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 PEA3 PEA3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kB. kB. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3434 # text = Document 003003463 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003463 003003463 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3435 # text = Inhibition of dexamethasone binding to human glucocorticoid receptor by New World primate cell extracts. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 New New PROPN NNP Number=Sing _ _ _ _ 11 World World PROPN NNP Number=Sing _ _ _ _ 12 primate primate ADJ JJ Degree=Pos _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3436 # text = To determine if New World primates express an inhibitor that influences glucocorticoid receptor (GR) binding characteristics, we examined [3H]dexamethasone binding in cytosol prepared from B95-8 lymphoid cells, derived from the cotton top tamarin (Saguinus oedipus), in combination with cytosol prepared from human or rat tissues. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 if if SCONJ IN _ _ _ _ _ 4 New New PROPN NNP Number=Sing _ _ _ _ 5 World world PROPN NNP Number=Sing _ _ _ _ 6 primates primate NOUN NNS Number=Plur _ _ _ _ 7 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 influences influence VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 GR GR NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 binding binding VERB VBG VerbForm=Ger _ _ _ _ 18 characteristics characteristic NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 21 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 3H] 3h] NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 25 binding bind VERB VBG VerbForm=Ger _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 28 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 from from ADP IN _ _ _ _ _ 30 B95 B95 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - SYM SYM _ _ _ _ SpaceAfter=No 32 8 8 NUM CD NumType=Card _ _ _ _ 33 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 from from ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 cotton cotton NOUN NN Number=Sing _ _ _ _ 40 top top NOUN NN Number=Sing _ _ _ _ 41 tamarin tamarin NOUN NN Number=Sing _ _ _ _ 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 Saguinus Saguinus ADJ JJ Degree=Pos _ _ _ _ 44 oedipus oedipus NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 combination combination NOUN NN Number=Sing _ _ _ _ 49 with with ADP IN _ _ _ _ _ 50 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 51 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 52 from from ADP IN _ _ _ _ _ 53 human human NOUN NN Number=Sing _ _ _ _ 54 or or CCONJ CC _ _ _ _ _ 55 rat rat NOUN NN Number=Sing _ _ _ _ 56 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 3437 # text = B95-8 cytosol inhibited specific binding of [3H]dexamethasone (P < 0.01) when mixed with cytosol prepared from either a human lymphoid cell line (HL) or rat thymus. 1 B95 B95 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 - - SYM SYM _ _ _ _ SpaceAfter=No 3 8 8 NUM CD NumType=Card _ _ _ _ 4 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 5 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 specific specific ADJ JJ Degree=Pos _ _ _ _ 7 binding binding NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 3H 3H PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 P p NOUN NN Number=Sing _ _ _ _ 15 < < PUNCT -LRB- _ _ _ _ _ 16 0.01 0.01 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 when when ADV WRB PronType=Int _ _ _ _ 19 mixed mix VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 22 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 either either CCONJ CC _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 lymphoid lymphoid NOUN NN Number=Sing _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 line line NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 HL HL NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 or or CCONJ CC _ _ _ _ _ 34 rat rat NOUN NN Number=Sing _ _ _ _ 35 thymus thymus NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 3438 # text = The inhibitory activity was heat labile and trypsin sensitive. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 3 activity activity NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 heat heat NOUN NN Number=Sing _ _ _ _ 6 labile labile NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 trypsin trypsin VERB VB VerbForm=Inf _ _ _ _ 9 sensitive sensitive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 3439 # text = Peak inhibitory activity was found in the 150-200 kd fractions after Sephacryl G-200 ultrafiltration. 1 Peak peak PROPN NNP Number=Sing _ _ _ _ 2 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 3 activity activity NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 150 150 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - SYM SYM _ _ _ _ SpaceAfter=No 10 200 200 NUM CD NumType=Card _ _ _ _ 11 kd k ADJ JJ Degree=Pos _ _ _ _ 12 fractions fraction NOUN NNS Number=Plur _ _ _ _ 13 after after ADP IN _ _ _ _ _ 14 Sephacryl Sephacryl PROPN NNP Number=Sing _ _ _ _ 15 G G PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 200 200 NUM CD NumType=Card _ _ _ _ 18 ultrafiltration ultrafiltration NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3440 # text = Scatchard analysis of [3H]dexamethasone binding using mixed cytosol showed a diminished GR apparent binding affinity when compared to HL cytosol. 1 Scatchard Scatchard ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 3H 3H PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 7 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 using use VERB VBG VerbForm=Ger _ _ _ _ 10 mixed mix ADJ JJ Degree=Pos _ _ _ _ 11 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 12 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 diminished diminish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 GR Gr NOUN NN Number=Sing _ _ _ _ 16 apparent apparent NOUN NN Number=Sing _ _ _ _ 17 binding binde VERB VBG VerbForm=Ger _ _ _ _ 18 affinity affinity NOUN NN Number=Sing _ _ _ _ 19 when when ADV WRB PronType=Int _ _ _ _ 20 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 HL Hl PROPN NNP Number=Sing _ _ _ _ 23 cytosol cytosol PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3441 # text = Kinetic studies using mixed cytosol indicated that B95-8 cytosol did not affect the apparent dissociation rate of [3H]dexamethasone. 1 Kinetic Kinetic ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 using use VERB VBG VerbForm=Ger _ _ _ _ 4 mixed mix ADJ JJ Degree=Pos _ _ _ _ 5 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 6 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 B95 B95 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - SYM SYM _ _ _ _ SpaceAfter=No 10 8 8 NUM CD NumType=Card _ _ _ _ 11 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 12 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 affect affect VERB VB VerbForm=Inf _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 apparent apparent ADJ JJ Degree=Pos _ _ _ _ 17 dissociation dissociation NOUN NN Number=Sing _ _ _ _ 18 rate rate NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 3H] 3h] NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3442 # text = These data demonstrate that B95-8 cells contain a competitive inhibitor that prevents binding of dexamethasone to its cognate receptor. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 B95 B95 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 8 8 NUM CD NumType=Card _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 competitive competitive ADJ JJ Degree=Pos _ _ _ _ 12 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 prevents prevent NOUN NNS Number=Plur _ _ _ _ 15 binding binding VERB VBG VerbForm=Ger _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 cognate cognate ADJ JJ Degree=Pos _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3443 # text = Document 003003465 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003465 003003465 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3444 # text = Age-related decreases in IL-2 production by human T cells are associated with impaired activation of nuclear transcriptional factors AP-1 and NF-AT. 1 Age age ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 related related ADJ JJ Degree=Pos _ _ _ _ 4 decreases decrease NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 production production NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 impaired impaire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ _ 23 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3445 # text = Although transcriptional factors AP-1 and nuclear factor of activated T cells (NF-AT) are important for the normal induction of IL-2, it is unknown if the age-related decline in IL-2 production by activated human T cells may be associated with aberrancies in transcriptional regulatory proteins. 1 Although although SCONJ IN _ _ _ _ _ 2 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 T T PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 important important ADJ JJ Degree=Pos _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 normal normal ADJ JJ Degree=Pos _ _ _ _ 24 induction induction NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 31 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 unknown unknown ADJ JJ Degree=Pos _ _ _ _ 33 if if SCONJ IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 age age NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 related related ADJ JJ Degree=Pos _ _ _ _ 38 decline decline NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 2 2 NUM CD NumType=Card _ _ _ _ 43 production production NOUN NN Number=Sing _ _ _ _ 44 by by ADP IN _ _ _ _ _ 45 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 human human ADJ JJ Degree=Pos _ _ _ _ 47 T t PROPN NNP Number=Sing _ _ _ _ 48 cells cell NOUN NNS Number=Plur _ _ _ _ 49 may may AUX MD VerbForm=Fin _ _ _ _ 50 be be AUX VB VerbForm=Inf _ _ _ _ 51 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 52 with with ADP IN _ _ _ _ _ 53 aberrancies aberrancy NOUN NNS Number=Plur _ _ _ _ 54 in in ADP IN _ _ _ _ _ 55 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 56 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 57 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 3446 # text = In the current studies, IL-2 production by T cells from elderly (mean 78 years) and young (mean 37 years) humans was measured in cultures stimulated with PHA, PHA plus PMA, crosslinked anti-CD3 mAB OKT3 plus PMA, or PMA plus ionomycin. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 current current ADJ JJ Degree=Pos _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 production production NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 elderly elderly ADV RB _ _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 mean mean VERB VB VerbForm=Inf _ _ _ _ 17 78 78 NUM CD NumType=Card _ _ _ _ 18 years year NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 young young ADV RB _ _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 mean mean VERB VB VerbForm=Inf _ _ _ _ 24 37 37 NUM CD NumType=Card _ _ _ _ 25 years year NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 humans human NOUN NNS Number=Plur _ _ _ _ 28 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 29 measured measure VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 cultures culture NOUN NNS Number=Plur _ _ _ _ 32 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 PHA PHA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 PHA PHA PROPN NNP Number=Sing _ _ _ _ 37 plus plus CCONJ CC _ _ _ _ _ 38 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 crosslinked crosslink VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 41 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 42 mAB mab NOUN NN Number=Sing _ _ _ _ 43 OKT3 OKT3 NUM CD NumType=Card _ _ _ _ 44 plus plus CCONJ CC _ _ _ _ _ 45 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 or or CCONJ CC _ _ _ _ _ 48 PMA PMA PROPN NNP Number=Sing _ _ _ _ 49 plus plus CCONJ CC _ _ _ _ _ 50 ionomycin ionomycin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 3447 # text = Substantial decreases of IL-2 production were observed for cell cultures from 7 of 12 elderly individuals in response to the different stimuli, whereas the levels of IL-2 produced by stimulated T cells from other elderly individuals were equivalent to those observed for stimulated T cells of young subjects. 1 Substantial substantial ADJ JJ Degree=Pos _ _ _ _ 2 decreases decrease NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 production production NOUN NN Number=Sing _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 cultures culture NOUN NNS Number=Plur _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 7 7 NUM CD NumType=Card _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 12 12 NUM CD NumType=Card _ _ _ _ 17 elderly elderly ADJ JJ Degree=Pos _ _ _ _ 18 individuals individual NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 response response NOUN NN Number=Sing _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 different different ADJ JJ Degree=Pos _ _ _ _ 24 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 whereas whereas SCONJ IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 levels level NOUN NNS Number=Plur _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 2 2 NUM CD NumType=Card _ _ _ _ 33 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 T t PROPN NNP Number=Sing _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ _ 38 from from ADP IN _ _ _ _ _ 39 other other ADJ JJ Degree=Pos _ _ _ _ 40 elderly elderly ADJ JJ Degree=Pos _ _ _ _ 41 individuals individual NOUN NNS Number=Plur _ _ _ _ 42 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 43 equivalent equivalent ADJ JJ Degree=Pos _ _ _ _ 44 to to ADP IN _ _ _ _ _ 45 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 46 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 for for ADP IN _ _ _ _ _ 48 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 49 T t PROPN NNP Number=Sing _ _ _ _ 50 cells cell NOUN NNS Number=Plur _ _ _ _ 51 of of ADP IN _ _ _ _ _ 52 young young ADJ JJ Degree=Pos _ _ _ _ 53 subjects subjects NOUN NNS Number=Plur _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 3448 # text = Analyses of nuclear extracts by electrophoretic DNA mobility shift assays showed that decreased IL-2 production by stimulated T cells of elderly individuals was closely associated with impairments in the activation of both AP-1 and NF-AT. 1 Analyses analysis NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 extracts extract NOUN NNS Number=Plur _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 7 DNA dna NOUN NN Number=Sing _ _ _ _ 8 mobility mobility NOUN NN Number=Sing _ _ _ _ 9 shift shift NOUN NN Number=Sing _ _ _ _ 10 assays assays NOUN NNS Number=Plur _ _ _ _ 11 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 production production NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 elderly elderly ADJ JJ Degree=Pos _ _ _ _ 24 individuals individual NOUN NNS Number=Plur _ _ _ _ 25 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 26 closely closely ADV RB _ _ _ _ _ 27 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 impairments impairment NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 both both DET DT _ _ _ _ _ 35 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 AT at PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3449 # text = By contrast, T cells from elderly subjects with normal levels of IL-2 production exhibited normal activation of AP-1 and NF-AT. 1 By by ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 T t NUM CD NumType=Card _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 elderly elderly ADJ JJ Degree=Pos _ _ _ _ 8 subjects subject NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 normal normal ADJ JJ Degree=Pos _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 production production NOUN NN Number=Sing _ _ _ _ 17 exhibited exhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 normal normal ADJ JJ Degree=Pos _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3450 # text = In addition, the results of competition experiments analyzing the normal components of NF-AT showed that the age-related reductions in stimulus-dependent NF-AT complexes corresponded to the slow migrating complexes that were composed of c-Fos/c-Jun AP-1. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 competition competition NOUN NN Number=Sing _ _ _ _ 8 experiments experiment NOUN NNS Number=Plur _ _ _ _ 9 analyzing analyze VERB VBG VerbForm=Ger _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 normal normal ADJ JJ Degree=Pos _ _ _ _ 12 components component NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 AT AT PROPN NNP Number=Sing _ _ _ _ 17 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 age age NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 related related ADJ JJ Degree=Pos _ _ _ _ 23 reductions reduction NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 stimulus stimulus ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 28 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 AT at PROPN NNP Number=Sing _ _ _ _ 31 complexes complex NOUN NNS Number=Plur _ _ _ _ 32 corresponded correspond VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 slow slow ADJ JJ Degree=Pos _ _ _ _ 36 migrating migrating NOUN NN Number=Sing _ _ _ _ 37 complexes complex NOUN NNS Number=Plur _ _ _ _ 38 that that PRON WDT PronType=Rel _ _ _ _ 39 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 40 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 c-Fos/c c-Fos/c PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 -Jun -Jun PROPN NNP Number=Sing _ _ _ _ 44 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 3451 # text = The resting and stimulated levels of NF kappa B were reduced in T cells from certain elderly individuals; however, alterations of NF kappa B did not correlate with changes in IL-2 expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 resting resting NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 stimulated stimulate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 levels level NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ _ 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B b PROPN NNP Number=Sing _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 certain certain ADJ JJ Degree=Pos _ _ _ _ 17 elderly elderly ADJ JJ Degree=Pos _ _ _ _ 18 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 ; ; PUNCT , _ _ _ _ _ 20 however however ADV RB _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 alterations alteration NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ _ 25 kappa kappa PROPN NNP Number=Sing _ _ _ _ 26 B B PROPN NNP Number=Sing _ _ _ _ 27 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 not not PART RB _ _ _ _ _ 29 correlate correlate VERB VB VerbForm=Inf _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 changes change NOUN NNS Number=Plur _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 2 2 NUM CD NumType=Card _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3452 # text = Thus, these results show that age-related impairments in the activation of AP-1 and NF-AT are closely associated with decreased expression of IL-2 and further suggest that aberrancies in the signaling pathways important for the induction of transcriptionally active c-Fos/c-Jun AP-1 may contribute to the impaired activation of NF-AT. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 age age NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 related related ADJ JJ Degree=Pos _ _ _ _ 10 impairments impairment NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 AT at NOUN NN Number=Sing _ _ _ _ 22 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 closely closely ADV RB _ _ _ _ _ 24 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 further further ADV RB _ _ _ _ _ 34 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 that that SCONJ IN _ _ _ _ _ 36 aberrancies aberrancy NOUN NNS Number=Plur _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 signaling signaling NOUN NN Number=Sing _ _ _ _ 40 pathways pathways NOUN NNS Number=Plur _ _ _ _ 41 important important ADJ JJ Degree=Pos _ _ _ _ 42 for for ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 induction induction NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 transcriptionally transcriptionally ADV RB _ _ _ _ _ 47 active active ADJ JJ Degree=Pos _ _ _ _ 48 c-Fos/c c-Fos/c ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 49 -Jun -Jun NOUN NN Number=Sing _ _ _ _ 50 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 1 1 NUM CD NumType=Card _ _ _ _ 53 may may AUX MD VerbForm=Fin _ _ _ _ 54 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 55 to to ADP IN _ _ _ _ _ 56 the the DET DT Definite=Def|PronType=Art _ _ _ _ 57 impaired impaire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 58 activation activation NOUN NN Number=Sing _ _ _ _ 59 of of ADP IN _ _ _ _ _ 60 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 61 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 62 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 63 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3453 # text = Document 003003469 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003469 003003469 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3454 # text = Dimerization of NF-KB2 with RelA(p65) regulates DNA binding, transcriptional activation, and inhibition by an I kappa B-alpha (MAD-3). 1 Dimerization Dimerization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 KB2 Kb2 NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 RelA RelA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 23 kappa kappa NOUN NN Number=Sing _ _ _ _ 24 B- B- SYM SYM _ _ _ _ SpaceAfter=No 25 alpha alpha NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 MAD mad NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3455 # text = Inducible expression of human immunodeficiency virus (HIV) is regulated by a cellular transcription factor, nuclear factor kappa B (NF-kappa B). 1 Inducible Inducible ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3456 # text = NF-kappa B is composed of distinct subunits; five independent genes, NFKB1(p105), NFKB2(p100), RelA(p65), c-rel and relB, that encode related proteins that bind to kappa B DNA elements have been isolated. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 9 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 ; ; PUNCT , _ _ _ _ _ 11 five five NUM CD NumType=Card _ _ _ _ 12 independent independent ADJ JJ Degree=Pos _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 NFKB1 NFKB1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 p105 p105 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 NFKB2 NFKB2 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 p100 p100 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 RelA RelA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 c- c- SYM NFP _ _ _ _ SpaceAfter=No 31 rel rel NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 relB relb NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 that that PRON WDT PronType=Rel _ _ _ _ 36 encode encode VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 37 related relate ADJ JJ Degree=Pos _ _ _ _ 38 proteins protein NOUN NNS Number=Plur _ _ _ _ 39 that that PRON WDT PronType=Rel _ _ _ _ 40 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 41 to to ADP IN _ _ _ _ _ 42 kappa kappa NOUN NN Number=Sing _ _ _ _ 43 B b NOUN NN Number=Sing _ _ _ _ 44 DNA dna NOUN NN Number=Sing _ _ _ _ 45 elements element NOUN NNS Number=Plur _ _ _ _ 46 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 47 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 48 isolated isolate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 3457 # text = We have previously found that NFKB2(p49/p52) acts in concert with RelA(p65) to stimulate the HIV enhancer in Jurkat T-leukemia cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 NFKB2 Nfkb2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 p49/ p49/ SYM SYM _ _ _ _ SpaceAfter=No 9 p52 p52 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 acts act NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 concert concert NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 RelA RelA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 HIV Hiv PROPN NNP Number=Sing _ _ _ _ 23 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 26 T- T- PUNCT , _ _ _ _ SpaceAfter=No 27 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3458 # text = Here we examine the biochemical basis for the transcriptional regulation of HIV by NFKB2. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 examine examine VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 6 basis basis NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 10 regulation regulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 HIV HIV PROPN NNP Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 NFKB2 NFKB2 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3459 # text = Using Scatchard analysis, we have determined the dissociation constants of homodimeric p49 and heterodimeric p49/p65 for binding to the HIV kappa B site. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 Scatchard Scatchard PROPN NNP Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 dissociation dissociation NOUN NN Number=Sing _ _ _ _ 10 constants constant NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 homodimeric homodimeric ADJ JJ Degree=Pos _ _ _ _ 13 p49 p49 NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 heterodimeric heterodimeric ADJ JJ Degree=Pos _ _ _ _ 16 p49 p49 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 p65 p65 NOUN NN Number=Sing _ _ _ _ 19 for for SCONJ IN _ _ _ _ _ 20 binding bind VERB VBG VerbForm=Ger _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 HIV HIV PROPN NNP Number=Sing _ _ _ _ 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ 25 B b PROPN NNP Number=Sing _ _ _ _ 26 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3460 # text = p49 has a approximately 18-fold-lower affinity for the HIV kappa B site (KD = 69.1 pM) 1 p49 p49 NOUN NN Number=Sing _ _ _ _ 2 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 approximately approximately ADV RB _ _ _ _ _ 5 18 18 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 lower lower ADJ JJ Degree=Pos _ _ _ _ 10 affinity affinity NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 HIV Hiv NOUN NN Number=Sing _ _ _ _ 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 site site NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 KD kd NOUN NN Number=Sing _ _ _ _ 19 = = SYM SYM _ _ _ _ _ 20 69.1 69.1 NUM CD NumType=Card _ _ _ _ 21 pM pm NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ # sent_id = 3461 # text = than does the approximately 50-kDa protein NFKB1(p50) derived from p105 (KD = 3.9 pM). 1 than than ADP IN _ _ _ _ _ 2 does do VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 approximately approximately ADV RB _ _ _ _ _ 5 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kDa kDa NOUN NN Number=Sing _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 NFKB1 NFKB1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 p105 p105 NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 KD kd NOUN NN Number=Sing _ _ _ _ 18 = = SYM SYM _ _ _ _ _ 19 3.9 3.9 NUM CD NumType=Card _ _ _ _ 20 pM pm NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3462 # text = In contrast, the affinity of heterodimeric NFKB2(p49)/RelA(p65) for this site is approximately 6-fold higher (KD = 11.8 pM) than that of p49 alone. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 affinity affinity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 heterodimeric heterodimeric ADJ JJ Degree=Pos _ _ _ _ 8 NFKB2 Nfkb2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 p49 p49 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 RelA RelA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 p65 p65 X LS _ _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 19 site site NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 approximately approximately ADV RB _ _ _ _ _ 22 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 fold fold NOUN NN Number=Sing _ _ _ _ 25 higher higher ADJ JJR Degree=Cmp _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 KD K VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 28 = = SYM SYM _ _ _ _ _ 29 11.8 11.8 NUM CD NumType=Card _ _ _ _ 30 pM pm NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 than than ADP IN _ _ _ _ _ 33 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 p49 p49 NUM CD NumType=Card _ _ _ _ 36 alone alone ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3463 # text = Consistent with these findings, in vitro transcription was stimulated 18-fold by the addition of preformed, heterodimeric NFKB2(p49)/RelA(p65) protein. 1 Consistent consistent ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 findings finding NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 18 18 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 fold fold VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 addition addition NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 preformed preformed VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 heterodimeric heterodimeric ADJ JJ Degree=Pos _ _ _ _ 21 NFKB2 Nfkb2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 p49 p49 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 / / PUNCT , _ _ _ _ SpaceAfter=No 26 RelA RelA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3464 # text = Transcriptional activation of the HIV enhancer was also subject to regulation by recently cloned I kappa B-alpha(MAD-3). 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 HIV HIV PROPN NNP Number=Sing _ _ _ _ 6 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 also also ADV RB _ _ _ _ _ 9 subject subject ADJ JJ Degree=Pos _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 regulation regulation VERB VB VerbForm=Inf _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 recently recently ADV RB _ _ _ _ _ 14 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 kappa kappa X GW _ _ _ _ _ 17 B- B- X GW _ _ _ _ SpaceAfter=No 18 alpha alpha X GW _ _ _ _ SpaceAfter=No 19 ( ( X GW _ _ _ _ SpaceAfter=No 20 MAD mad NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3465 # text = Recombinant 1 Recombinant Recombinant NOUN NN Number=Sing _ _ _ _ # sent_id = 3466 # text = I kappa B-alpha(MAD-3) inhibited the DNA binding activity of p65, p49/p65, and p50/p65 but stimulated the binding of NFKB2(p49) or NFKB1(p50). 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa X FW Foreign=Yes _ _ _ _ 3 B b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 MAD mad NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 DNA dna NOUN NN Number=Sing _ _ _ _ 14 binding binde VERB VBG VerbForm=Ger _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 p49/ p49/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 20 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 / / PUNCT , _ _ _ _ SpaceAfter=No 25 p65 p65 NOUN NN Number=Sing _ _ _ _ 26 but but CCONJ CC _ _ _ _ _ 27 stimulated stimulate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 binding binding NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 NFKB2 NFKB2 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 p49 p49 NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 or or CCONJ CC _ _ _ _ _ 36 NFKB1 NFKB1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 3467 # text = Functional activation of an HIV reporter plasmid by p49/p65 in transiently transfected Jurkat T-leukemia cells was also inhibited by coexpression of MAD-3. 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 HIV HIV PROPN NNP Number=Sing _ _ _ _ 6 reporter reporter NOUN NN Number=Sing _ _ _ _ 7 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 p49 p49 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 p65 p65 NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 transiently transiently ADV RB _ _ _ _ _ 14 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 16 T- T- SYM NFP _ _ _ _ SpaceAfter=No 17 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 also also ADV RB _ _ _ _ _ 21 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 coexpression coexpression NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 MAD mad PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3468 # text = (ABSTRACT TRUNCATED AT 250 WORDS) 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 ABSTRACT ABSTRACT X GW _ _ _ _ _ 3 TRUNCATED Truncate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 AT at ADV RB _ _ _ _ _ 5 250 250 NUM CD NumType=Card _ _ _ _ 6 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3469 # text = Document 003003471 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003471 003003471 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3470 # text = Interferon-alpha induction of STATs1, -3 DNA binding and growth arrest is independent of Lck and active mitogen-activated kinase in T cells. 1 Interferon Interferon PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 alpha alpha X FW Foreign=Yes _ _ _ _ 4 induction induction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 STATs1 STATs1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 3 3 NUM CD NumType=Card _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ _ 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 growth growth NOUN NN Number=Sing _ _ _ _ 14 arrest arrest NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 independent independent ADJ JJ Degree=Pos _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 Lck Lck PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 active active ADJ JJ Degree=Pos _ _ _ _ 21 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 kinase kinase NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 T t PROPN NNP Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3471 # text = Type I interferons (IFNs) are a family of cytokines that have antiviral and antiproliferative effects. 1 Type type NOUN NN Number=Sing _ _ _ _ 2 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 3 interferons interferon NOUN NNS Number=Plur _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 IFNs IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 family family NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 antiviral antiviral ADJ JJ Degree=Pos _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 antiproliferative antiproliferative ADJ JJ Degree=Pos _ _ _ _ 17 effects effect NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3472 # text = Data regarding the processes by which these cytokines transduce signals from the cell membrane to the nucleus are becoming increasingly complex. 1 Data data PROPN NNP Number=Sing _ _ _ _ 2 regarding regard VERB VBG VerbForm=Ger _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 processes process NOUN NNS Number=Plur _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 9 transduce transduce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 signals signal NOUN NNS Number=Plur _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 membrane membrane NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 becoming become VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 20 increasingly increasingly ADV RB _ _ _ _ _ 21 complex complex ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3473 # text = The most characterized pathway is via JAK-STAT signaling. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 most most ADV RBS _ _ _ _ _ 3 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 pathway pathway NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 via via ADP IN _ _ _ _ _ 7 JAK JAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 STAT Stat PROPN NNP Number=Sing _ _ _ _ 10 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 3474 # text = Previous studies established a potential role for the Src-family kinase Lck in JAK-STAT signaling. 1 Previous previous ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 established establish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 potential potential ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 Src- src- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 family family NOUN NN Number=Sing _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 Lck Lck PROPN NNP Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 JAK JAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 STAT STAT PROPN NNP Number=Sing _ _ _ _ 17 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3475 # text = Therefore, this study was designed to analyze the role of Lck in IFN-alpha signaling by using the Jurkat, JCam (an Lck-defective cell line derived from Jurkat), and JCam/Lck (JCam cells with Lck restored). 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 designed design VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 analyze analyze VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 role role NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 Lck Lck PROPN NNP Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 18 by by SCONJ IN _ _ _ _ _ 19 using use VERB VBG VerbForm=Ger _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 JCam JCam PROPN NNP Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 Lck-defective Lck-defective ADJ JJ Degree=Pos _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 line line NOUN NN Number=Sing _ _ _ _ 29 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 from from ADP IN _ _ _ _ _ 31 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 JC JC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 am be PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 / / PUNCT , _ _ _ _ SpaceAfter=No 38 Lck Lck PROPN NNP Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 JCam JCam PROPN NNP Number=Sing _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ _ 42 with with ADP IN _ _ _ _ _ 43 Lck Lck PROPN NNP Number=Sing _ _ _ _ 44 restored restore VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 3476 # text = The results show that IFN-alpha can induce MAPK activity, but only in cells containing Lck. Furthermore, STATs1 and -3 are effectively phosphorylated and activated to bind DNA in the absence of Lck expression in IFN-alpha-treated cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 IFN IFN NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 induce induce VERB VB VerbForm=Inf _ _ _ _ 10 MAPK MAPK PROPN NNP Number=Sing _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 only only ADV RB _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 containing contain VERB VBG VerbForm=Ger _ _ _ _ 18 Lck. Lck. PROPN NNP Number=Sing _ _ _ _ 19 Furthermore Furthermore PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 STATs1 STATs1 PROPN NNP Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 3 3 X LS _ _ _ _ _ 25 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 effectively effectively ADV RB _ _ _ _ _ 27 phosphorylated phosphorylated VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 to to PART TO _ _ _ _ _ 31 bind bind VERB VB VerbForm=Inf _ _ _ _ 32 DNA dna NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 absence absence NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 Lck Lck PROPN NNP Number=Sing _ _ _ _ 38 expression expression NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 3477 # text = Finally, the results demonstrate that IFN-alpha exerts an antiproliferative effect in all three cell lines. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 IFN Ifn ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 alpha alpha NOUN NN Number=Sing _ _ _ _ 10 exerts exert NOUN NNS Number=Plur _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 antiproliferative antiproliferative ADJ JJ Degree=Pos _ _ _ _ 13 effect effect NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 all all DET DT _ _ _ _ _ 16 three three NUM CD NumType=Card _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3478 # text = These data indicate that Lck and active MAPK do not affect IFN-alpha-induced growth arrest or induction of STAT1s1 and -3 DNA binding ability. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Lck Lck PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 active active ADJ JJ Degree=Pos _ _ _ _ 8 MAPK Mapk PROPN NNP Number=Sing _ _ _ _ 9 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 affect affect VERB VB VerbForm=Inf _ _ _ _ 12 IFN Ifn ADV RB _ _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 alpha-induced alpha-induced ADJ JJ Degree=Pos _ _ _ _ 15 growth growth NOUN NN Number=Sing _ _ _ _ 16 arrest arrest NOUN NN Number=Sing _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 induction induction NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 STAT1s1 STAT1s1 NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 3 3 NUM CD NumType=Card _ _ _ _ 24 DNA dna NOUN NN Number=Sing _ _ _ _ 25 binding binding VERB VBG VerbForm=Ger _ _ _ _ 26 ability ability NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3479 # text = Copyright 1999 Academic Press. 1 Copyright copyright NOUN NN Number=Sing _ _ _ _ 2 1999 1999 NUM CD NumType=Card _ _ _ _ 3 Academic academic PROPN NNP Number=Sing _ _ _ _ 4 Press. Press. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3480 # text = Document 003003473 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003473 003003473 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3481 # text = Evidence for a polyclonal etiology of palmar fibromatosis. 1 Evidence evidence NOUN NN Number=Sing _ _ _ _ 2 for for ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 polyclonal polyclonal ADJ JJ Degree=Pos _ _ _ _ 5 etiology etiology NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 palmar palmar NOUN NN Number=Sing _ _ _ _ 8 fibromatosis fibromatosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3482 # text = X chromosome inactivation patterns at the androgen receptor locus were evaluated to determine clonality in microdissected lesional tissue and in leukocytes from 2 women with Dupuytren's disease. 1 X x ADP IN _ _ _ _ _ 2 chromosome chromosome DET DT _ _ _ _ _ 3 inactivation inactivation NOUN NN Number=Sing _ _ _ _ 4 patterns pattern NOUN NNS Number=Plur _ _ _ _ 5 at at ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 androgen androgen ADJ JJ Degree=Pos _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 locus locus NOUN NN Number=Sing _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 evaluated evaluate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 determine determine VERB VB VerbForm=Inf _ _ _ _ 14 clonality clonality NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 microdissected microdissect ADJ JJ Degree=Pos _ _ _ _ 17 lesional lesional ADJ JJ Degree=Pos _ _ _ _ 18 tissue tissue NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 2 2 NUM CD NumType=Card _ _ _ _ 24 women woman NOUN NNS Number=Plur _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 Dupuytren Dupuytren PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 's 's PART POS _ _ _ _ _ 28 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3483 # text = The tissue from both patients generated a polyclonal pattern of X chromosome inactivation of the human androgen receptor gene. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 tissue tissue NOUN NN Number=Sing _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 both both DET DT _ _ _ _ _ 5 patients patient NOUN NN Number=Sing _ _ _ _ 6 generated generate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 polyclonal polyclonal ADJ JJ Degree=Pos _ _ _ _ 9 pattern pattern NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 X x ADJ JJ Degree=Pos _ _ _ _ 12 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 13 inactivation inactivation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 androgen androgen NOUN NN Number=Sing _ _ _ _ 18 receptor receptor NOUN NN Number=Sing _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3484 # text = This finding supports a polyclonal reactive process as the underlying etiology for palmar fibromatosis. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 finding finding NOUN NN Number=Sing _ _ _ _ 3 supports support VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 polyclonal polyclonal ADJ JJ Degree=Pos _ _ _ _ 6 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 7 process process NOUN NN Number=Sing _ _ _ _ 8 as as SCONJ IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 underlying underly ADJ JJ Degree=Pos _ _ _ _ 11 etiology etiology NOUN NN Number=Sing _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 palmar palmar NOUN NN Number=Sing _ _ _ _ 14 fibromatosis fibromatosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3485 # text = Document 003003476 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003476 003003476 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3486 # text = Comparative analysis identifies conserved tumor necrosis factor receptor-associated factor 3 binding sites in the human and simian Epstein-Barr virus oncogene LMP1. 1 Comparative Comparative ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 identifies identify VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 conserved conserve ADJ JJ Degree=Pos _ _ _ _ 5 tumor tumor NOUN NN Number=Sing _ _ _ _ 6 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 3 3 NUM CD NumType=Card _ _ _ _ 13 binding binding VERB VBG VerbForm=Ger _ _ _ _ 14 sites site NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 simian simian ADJ JJ Degree=Pos _ _ _ _ 20 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 Barr Barr PROPN NNP Number=Sing _ _ _ _ 23 virus virus NOUN NN Number=Sing _ _ _ _ 24 oncogene oncogene PROPN NNP Number=Sing _ _ _ _ 25 LMP1 Lmp1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3487 # text = Nonhuman primates are naturally infected with a B-lymphotropic herpesvirus closely related to Epstein-Barr virus (EBV). 1 Nonhuman Nonhuman ADJ JJ Degree=Pos _ _ _ _ 2 primates primate NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 naturally naturally ADV RB _ _ _ _ _ 5 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 lymphotropic lymphotropic NOUN NN Number=Sing _ _ _ _ 11 herpesvirus herpesvirus NOUN NN Number=Sing _ _ _ _ 12 closely closely ADV RB _ _ _ _ _ 13 related related ADJ JJ Degree=Pos _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 Barr Barr PROPN NNP Number=Sing _ _ _ _ 18 virus virus NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3488 # text = These simian EBV share considerable genetic, biologic, and epidemiologic features with human EBV, including virus-induced tumorigenesis. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 simian simian ADJ JJ Degree=Pos _ _ _ _ 3 EBV EBV PROPN NNP Number=Sing _ _ _ _ 4 share share NOUN NN Number=Sing _ _ _ _ 5 considerable considerable ADJ JJ Degree=Pos _ _ _ _ 6 genetic genetic NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 biologic biologic NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 epidemiologic epidemiologic ADJ JJ Degree=Pos _ _ _ _ 12 features feature NOUN NNS Number=Plur _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 EBV EBV NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 including include VERB VBG VerbForm=Ger _ _ _ _ 18 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 -induced -induced VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 tumorigenesis tumorigenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3489 # text = However, latent, transformation-associated viral genes demonstrate marked sequence divergence among species despite the conserved functions. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 latent latent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 transformation transformation NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 viral viral ADJ JJ Degree=Pos _ _ _ _ 9 genes gene NOUN NNS Number=Plur _ _ _ _ 10 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 sequence sequence NOUN NN Number=Sing _ _ _ _ 13 divergence divergence NOUN NN Number=Sing _ _ _ _ 14 among among ADP IN _ _ _ _ _ 15 species species NOUN NNS Number=Plur _ _ _ _ 16 despite despite ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 functions function NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3490 # text = We have cloned the latent membrane protein 1 (LMP1) homologs from the simian EBV naturally infecting baboons (cercopithicine herpesvirus 12, herpesvirus papio) and rhesus monkeys (cercopithicine herpesvirus 15) for a comparative study with the human EBV oncogene. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 latent latent ADJ JJ Degree=Pos _ _ _ _ 6 membrane membrane NOUN NN Number=Sing _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 1 1 NUM CD NumType=Card _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 LMP1 Lmp1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 homologs homolog NOUN NNS Number=Plur _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 simian simian ADJ JJ Degree=Pos _ _ _ _ 16 EBV EBV PROPN NNP Number=Sing _ _ _ _ 17 naturally naturally ADV RB _ _ _ _ _ 18 infecting infecte VERB VBG VerbForm=Ger _ _ _ _ 19 baboons baboon NOUN NNS Number=Plur _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 cercopithicine cercopithicine NOUN NN Number=Sing _ _ _ _ 22 herpesvirus herpesvirus NOUN NN Number=Sing _ _ _ _ 23 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 herpesvirus herpesvirus NOUN NN Number=Sing _ _ _ _ 26 papio papio NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 rhesus rhesus ADJ JJ Degree=Pos _ _ _ _ 30 monkeys monkey NOUN NNS Number=Plur _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 cercopithicine cercopithicine NOUN NN Number=Sing _ _ _ _ 33 herpesvirus herpesvirus NOUN NN Number=Sing _ _ _ _ 34 15 15 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 for for ADP IN _ _ _ _ _ 37 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 comparative comparative ADJ JJ Degree=Pos _ _ _ _ 39 study study NOUN NN Number=Sing _ _ _ _ 40 with with ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 human human ADJ JJ Degree=Pos _ _ _ _ 43 EBV EBV PROPN NNP Number=Sing _ _ _ _ 44 oncogene oncogene ADV RB _ _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 3491 # text = The transmembrane domains are well conserved, but there is striking sequence divergence of the carboxy-terminal cytoplasmic domain essential for B-cell immortalization and interaction with the tumor necrosis factor receptor signaling pathway. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transmembrane transmembrane NOUN NN Number=Sing _ _ _ _ 3 domains domain NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 well well ADV RB Degree=Pos _ _ _ _ 6 conserved conserve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 but but CCONJ CC _ _ _ _ _ 9 there there PRON EX _ _ _ _ _ 10 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 striking strik VERB VBG VerbForm=Ger _ _ _ _ 12 sequence sequence NOUN NN Number=Sing _ _ _ _ 13 divergence divergence NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 carboxy carboxy NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 19 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 20 domain domain NOUN NN Number=Sing _ _ _ _ 21 essential essential ADJ JJ Degree=Pos _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 B b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 immortalization immortalization NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 interaction interaction NOUN NN Number=Sing _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 tumor tumor NOUN NN Number=Sing _ _ _ _ 32 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 33 factor factor NOUN NN Number=Sing _ _ _ _ 34 receptor receptor NOUN NN Number=Sing _ _ _ _ 35 signaling signale VERB VBG VerbForm=Ger _ _ _ _ 36 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3492 # text = Nevertheless, the simian EBV LMP1s retain most functions in common with EBV LMP1, including the ability to induce NF-(kappa)B activity in human cells, to bind the tumor necrosis factor-associated factor 3 (TRAF3) in vitro, and to induce expression of tumor necrosis factor-responsive genes, such as ICAM1, in human B lymphocytes. 1 Nevertheless nevertheless ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 simian simian ADJ JJ Degree=Pos _ _ _ _ 5 EBV EBV PROPN NNP Number=Sing _ _ _ _ 6 LMP LMP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 1s 1 NOUN NNS Number=Plur _ _ _ _ 8 retain retain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 most most ADJ JJS Degree=Sup _ _ _ _ 10 functions function NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 common common ADJ JJ Degree=Pos _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 EBV EBV PROPN NNP Number=Sing _ _ _ _ 15 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 including include VERB VBG VerbForm=Ger _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 ability ability NOUN NN Number=Sing _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 induce induce VERB VB VerbForm=Inf _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 kappa kappa NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 B b ADJ JJ Degree=Pos _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 to to PART TO _ _ _ _ _ 34 bind bind VERB VB VerbForm=Inf _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 tumor tumor NOUN NN Number=Sing _ _ _ _ 37 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 38 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 -associated -associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 factor factor NOUN NN Number=Sing _ _ _ _ 41 3 3 NUM CD NumType=Card _ _ _ _ 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 TRAF3 TRAF3 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 vitro vitro PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 to to PART TO _ _ _ _ _ 50 induce induce VERB VB VerbForm=Inf _ _ _ _ 51 expression expression NOUN NN Number=Sing _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 tumor tumor NOUN NN Number=Sing _ _ _ _ 54 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 55 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 57 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 58 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 59 , , PUNCT , _ _ _ _ _ 60 such such ADJ JJ Degree=Pos _ _ _ _ 61 as as ADP IN _ _ _ _ _ 62 ICAM1 ICAM1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 63 , , PUNCT , _ _ _ _ _ 64 in in ADP IN _ _ _ _ _ 65 human human ADJ JJ Degree=Pos _ _ _ _ 66 B b NOUN NN Number=Sing _ _ _ _ 67 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 68 . . PUNCT . _ _ _ _ _ # sent_id = 3493 # text = Multiple TRAF3 binding sites containing a PXQXT/S core sequence can be identified in the simian EBV LMP1s by an in vitro binding assay. 1 Multiple multiple ADJ JJ Degree=Pos _ _ _ _ 2 TRAF3 TRAF3 NOUN NN Number=Sing _ _ _ _ 3 binding bind VERB VBG VerbForm=Ger _ _ _ _ 4 sites site NOUN NNS Number=Plur _ _ _ _ 5 containing contain VERB VBG VerbForm=Ger _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 PXQXT/ Pxqxt/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 S 's PART POS _ _ _ _ _ 9 core core NOUN NN Number=Sing _ _ _ _ 10 sequence sequence NOUN NN Number=Sing _ _ _ _ 11 can can AUX MD VerbForm=Fin _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 simian simian ADJ JJ Degree=Pos _ _ _ _ 17 EBV EBV PROPN NNP Number=Sing _ _ _ _ 18 LMP LMP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 1s 1 VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 vitro vitro NOUN NN Number=Sing _ _ _ _ 24 binding binding VERB VBG VerbForm=Ger _ _ _ _ 25 assay assay ADV RB _ _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3494 # text = A PXQXT/S-containing sequence is also present in the cytoplasmic domain of the Hodgkin's disease marker, CD30, and binds TRAF3 in vitro. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 PXQXT/S pxqxt/s NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 containing containing VERB VBG VerbForm=Ger _ _ _ _ 5 sequence sequence NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 present present ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 12 domain domain NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 Hodgkin Hodgkin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 's 's PART POS _ _ _ _ _ 17 disease disease NOUN NN Number=Sing _ _ _ _ 18 marker marker NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 CD30 CD30 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 binds bind NOUN NNS Number=Plur _ _ _ _ 24 TRAF3 TRAF3 VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3495 # text = The last 13 amino acids containing a PXQXT/S sequence are highly conserved in human and simian EBV LMP1 but do not bind TRAF3, suggesting a distinct role for this conserved region of LMP1. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 last last ADJ JJ Degree=Pos _ _ _ _ 3 13 13 NUM CD NumType=Card _ _ _ _ 4 amino amino NOUN NN Number=Sing _ _ _ _ 5 acids acid SCONJ IN _ _ _ _ _ 6 containing contain VERB VBG VerbForm=Ger _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 PXQXT/ Pxqxt/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 S 's PART POS _ _ _ _ _ 10 sequence sequence NOUN NN Number=Sing _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 highly highly ADV RB _ _ _ _ _ 13 conserved conserve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 simian simian ADJ JJ Degree=Pos _ _ _ _ 18 EBV EBV PROPN NNP Number=Sing _ _ _ _ 19 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 bind bind VERB VB VerbForm=Inf _ _ _ _ 24 TRAF3 TRAF3 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 29 role role NOUN NN Number=Sing _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 32 conserved conserved VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 region region NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 3496 # text = The conserved TRAF3 binding sites in LMP1 and the CD30 Hodgkin's disease marker provides further evidence that a TRAF3-mediated signal transduction pathway may be important in malignant transformation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 TRAF3 TRAF3 NOUN NN Number=Sing _ _ _ _ 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 sites site NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 CD30 CD30 PROPN NNP Number=Sing _ _ _ _ 11 Hodgkin Hodgkin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 's 's PART POS _ _ _ _ _ 13 disease disease NOUN NN Number=Sing _ _ _ _ 14 marker marker NOUN NN Number=Sing _ _ _ _ 15 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 further further ADJ JJ Degree=Pos _ _ _ _ 17 evidence evidence NOUN NN Number=Sing _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 TRAF3 TRAF3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 signal signal NOUN NN Number=Sing _ _ _ _ 24 transduction transduction NOUN NN Number=Sing _ _ _ _ 25 pathway pathway NOUN NN Number=Sing _ _ _ _ 26 may may AUX MD VerbForm=Fin _ _ _ _ 27 be be AUX VB VerbForm=Inf _ _ _ _ 28 important important ADJ JJ Degree=Pos _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 malignant malignant ADJ JJ Degree=Pos _ _ _ _ 31 transformation transformation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3497 # text = Document 003003478 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003478 003003478 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3498 # text = Overexpression of DR-nm23, a protein encoded by a member of the nm23 gene family, inhibits granulocyte differentiation and induces apoptosis in 32Dc13 myeloid cells. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 DR- dr- NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 nm23 nm23 NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 member member NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 nm23 nm23 NOUN NN Number=Sing _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 granulocyte granulocyte ADJ JJ Degree=Pos _ _ _ _ 20 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 induces induce NOUN NNS Number=Plur _ _ _ _ 23 apoptosis apoptosis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 32Dc13 32Dc13 NUM CD NumType=Card _ _ _ _ 26 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3499 # text = Chronic myelogenous leukemia evolves in two clinically distinct stages: a chronic and a blast crisis phase. 1 Chronic Chronic ADJ JJ Degree=Pos _ _ _ _ 2 myelogenous myelogenous ADJ JJ Degree=Pos _ _ _ _ 3 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 4 evolves evolve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 two two NUM CD NumType=Card _ _ _ _ 7 clinically clinically ADV RB _ _ _ _ _ 8 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 9 stages stage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 : : PUNCT : _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 chronic chronic NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 blast blast ADJ JJ Degree=Pos _ _ _ _ 16 crisis crisis NOUN NN Number=Sing _ _ _ _ 17 phase phase NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3500 # text = The molecular changes associated with chronic phase to blast crisis transition are largely unknown. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 3 changes change NOUN NNS Number=Plur _ _ _ _ 4 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 7 phase phase NOUN NN Number=Sing _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 blast blast VERB VB VerbForm=Inf _ _ _ _ 10 crisis crisis NOUN NN Number=Sing _ _ _ _ 11 transition transition NOUN NN Number=Sing _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 largely largely ADV RB _ _ _ _ _ 14 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3501 # text = We have identified a cDNA clone, DR-nm23, differentially expressed in a blast-crisis cDNA library, which has approximately 70% sequence similarity to the putative metastatic suppressor genes, nm23-H1 and nm23-H2. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 6 clone clone NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 DR- dr- NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 nm23 nm23 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 differentially differentially ADV RB _ _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 blast blast NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 crisis crisis NOUN NN Number=Sing _ _ _ _ 18 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 19 library library NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 approximately approximately ADV RB _ _ _ _ _ 24 70 70 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 % % SYM NN Number=Sing _ _ _ _ 26 sequence sequence NOUN NN Number=Sing _ _ _ _ 27 similarity similarity NOUN NN Number=Sing _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 putative putative ADJ JJ Degree=Pos _ _ _ _ 31 metastatic metastatic ADJ JJ Degree=Pos _ _ _ _ 32 suppressor suppressor NOUN NN Number=Sing _ _ _ _ 33 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 nm23 nm23 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 - - SYM SYM _ _ _ _ SpaceAfter=No 37 H1 H1 NUM CD NumType=Card _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 nm23 nm23 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 H2 H2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3502 # text = The deduced amino acid sequence similarity to the proteins encoded by these two latter genes is approximately 65% and includes domains and amino acid residues (the leucine zipper-like and the RGD domain, a serine and a histidine residue in the NH2- and in the COOH-terminal portion of the protein, respectively) postulated to be important for nm23 function. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 deduced deduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 amino amino DET DT _ _ _ _ _ 4 acid acid ADJ JJ Degree=Pos _ _ _ _ 5 sequence sequence NOUN NN Number=Sing _ _ _ _ 6 similarity similarity NOUN NN Number=Sing _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 13 two two NUM CD NumType=Card _ _ _ _ 14 latter latter ADJ JJ Degree=Pos _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 approximately approximately ADV RB _ _ _ _ _ 18 65 65 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 % % SYM NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 includes include VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 domains domain NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 amino amino DET DT _ _ _ _ _ 25 acid acid ADJ JJ Degree=Pos _ _ _ _ 26 residues residue NOUN NNS Number=Plur _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 leucine leucine NOUN NN Number=Sing _ _ _ _ 30 zipper zipper NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 like like ADJ JJ Degree=Pos _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 RGD RGD ADJ JJ Degree=Pos _ _ _ _ 36 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 serine serine NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 histidine histidine NOUN NN Number=Sing _ _ _ _ 43 residue residue NOUN NN Number=Sing _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 NH2 Nh2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT , _ _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 in in ADP IN _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 COOH COOh NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 54 portion portion NOUN NN Number=Sing _ _ _ _ 55 of of ADP IN _ _ _ _ _ 56 the the DET DT Definite=Def|PronType=Art _ _ _ _ 57 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 , , PUNCT , _ _ _ _ _ 59 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 60 ) ) PUNCT -RRB- _ _ _ _ _ 61 postulated postulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 62 to to PART TO _ _ _ _ _ 63 be be AUX VB VerbForm=Inf _ _ _ _ 64 important important ADJ JJ Degree=Pos _ _ _ _ 65 for for ADP IN _ _ _ _ _ 66 nm23 nm23 NUM CD NumType=Card _ _ _ _ 67 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 68 . . PUNCT . _ _ _ _ _ # sent_id = 3503 # text = DR-nm23 mRNA is preferentially expressed at early stages of myeloid differentiation of highly purified CD34+ cells. 1 DR- DR- SYM NFP _ _ _ _ SpaceAfter=No 2 nm23 nm23 NUM CD NumType=Card _ _ _ _ 3 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 preferentially preferentially ADV RB _ _ _ _ _ 6 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 at at ADP IN _ _ _ _ _ 8 early early ADJ JJ Degree=Pos _ _ _ _ 9 stages stage NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 12 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 highly highly ADV RB _ _ _ _ _ 15 purified purified VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 CD34 CD34 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 + + SYM SYM _ _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3504 # text = Its constitutive expression in the myeloid precursor 32Dc13 cell line, which is growth-factor dependent for both proliferation and differentiation, results in inhibition of granulocytic differentiation induced by granulocyte colony-stimulating factor and causes apoptotic cell death. 1 Its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 2 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 7 precursor precursor NOUN NN Number=Sing _ _ _ _ 8 32Dc13 32Dc13 NUM CD NumType=Card _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 both both DET DT _ _ _ _ _ 20 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 results result NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 29 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 30 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 granulocyte granulocyte NOUN NN Number=Sing _ _ _ _ 33 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 stimulating stimulating NOUN NN Number=Sing _ _ _ _ 36 factor factor NOUN NN Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 causes cause VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3505 # text = These results are consistent with a role for DR-nm23 in normal hematopoiesis and raise the possibility that its overexpression contributes to differentiation arrest, a feature of blastic transformation in chronic myelogenous leukemia. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 DR- DR- SYM NFP _ _ _ _ SpaceAfter=No 10 nm23 nm23 NUM CD NumType=Card _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 normal normal ADJ JJ Degree=Pos _ _ _ _ 13 hematopoiesis hematopoiesis NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 raise raise VERB VB VerbForm=Inf _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 possibility possibility NOUN NN Number=Sing _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 21 contributes contribute NOUN NNS Number=Plur _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 24 arrest arrest NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 feature feature NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 blastic blastic ADJ JJ Degree=Pos _ _ _ _ 30 transformation transformation NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 33 myelogenous myelogenous ADJ JJ Degree=Pos _ _ _ _ 34 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3506 # text = Document 003003481 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003481 003003481 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3507 # text = Induction of ICAM-1 and LFA-3 by Tax1 of human T-cell leukemia virus type 1 and mechanism of down-regulation of ICAM-1 or LFA-1 in adult-T-cell-leukemia cell lines. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 ICAM ICAM NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - SYM SYM _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 LFA LFa NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 3 3 NUM CD NumType=Card _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 Tax1 Tax1 NUM CD NumType=Card _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 17 virus virus NOUN NN Number=Sing _ _ _ _ 18 type type NOUN NN Number=Sing _ _ _ _ 19 1 1 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 down down ADV RB _ _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 regulation regulation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 ICAM ICAm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 LFA LFa NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 adult adult ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 36 -T-cell -T-cell ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3508 # text = The present study was undertaken to determine the role of HTLV-I TaxI in the up-regulation of ICAM-I and LFA-3 in human T cells transformed with HTLV-I and the mechanism of down-regulation of ICAM-I and LFA-I in ATL-derived cell lines. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 undertaken undertaken ADJ JJ Degree=Pos _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 determine determine VERB VB VerbForm=Inf _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 role role NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 14 TaxI taxi PROPN NNP Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 regulation regulation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 ICAM ICAm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 LFA LFA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 3 3 NUM CD NumType=Card _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 T t PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 down down ADV RB _ _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 regulation regulation NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 ICAM ICAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT , _ _ _ _ SpaceAfter=No 47 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 LFA LFA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT , _ _ _ _ SpaceAfter=No 51 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 52 in in ADP IN _ _ _ _ _ 53 ATL ATL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 56 cell cell NOUN NN Number=Sing _ _ _ _ 57 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 3509 # text = Induction of TaxI in a human T-cell line Jurkat carrying the TaxI gene under the metallothionein promoter led to increases in mRNA and surface expression of ICAM-I. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 TaxI taxi PROPN NNP Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 line line NOUN NN Number=Sing _ _ _ _ 10 Jurkat Jurkat SCONJ IN _ _ _ _ _ 11 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 TaxI taxi PROPN NNP Number=Sing _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 under under ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 metallothionein metallothionein NOUN NN Number=Sing _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ _ 19 led lead VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 increases increase NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 surface surface NOUN NN Number=Sing _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 ICAM ICAm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3510 # text = The response of LFA-3 to TaxI induction was, on the other hand, relatively slow and weak, and might be indirect. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 response response NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 LFA LFA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 3 3 NUM CD NumType=Card _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 TaxI taxi PROPN NNP Number=Sing _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 other other ADJ JJ Degree=Pos _ _ _ _ 15 hand hand NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 relatively relatively ADV RB _ _ _ _ _ 18 slow slow ADJ JJ Degree=Pos _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 weak weak ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 might might AUX MD VerbForm=Fin _ _ _ _ 24 be be AUX VB VerbForm=Inf _ _ _ _ 25 indirect indirect ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3511 # text = Transactivation of the ICAM-I promoter by TaxI was further shown by co-transfection of a CAT reporter construct with the ICAM-I promoter and a plasmid expressing TaxI. 1 Transactivation Transactivation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 promoter promoter VERB VB VerbForm=Inf _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 TaxI taxi PROPN NNP Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 further further ADV RB _ _ _ _ _ 12 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 co-transfection co-transfection NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 CAT cat ADJ JJ Degree=Pos _ _ _ _ 18 reporter reporter NOUN NN Number=Sing _ _ _ _ 19 construct construct NOUN NN Number=Sing _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 25 promoter promoter VERB VB VerbForm=Inf _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 29 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 30 TaxI taxi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3512 # text = The mechanism of down-regulation of ICAM-I or LFA-I in 4 ATL cell lines was next examined. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 down down ADV RB _ _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 regulation regulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 ICAM ICAm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 LFA LFA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 4 4 NUM CD NumType=Card _ _ _ _ 17 ATL Atl ADJ JJ Degree=Pos _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 lines line NOUN NNS Number=Plur _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 next next ADV RB _ _ _ _ _ 22 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3513 # text = ICAM-I mRNA was quite low in MT-I, but no genomic changes were found. 1 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 4 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 quite quite ADV RB _ _ _ _ _ 7 low low ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 MT Mt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 no no DET DT _ _ _ _ _ 15 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 16 changes change NOUN NNS Number=Plur _ _ _ _ 17 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3514 # text = The CAT reporter with the ICAM-I promoter was inactive in MT-I. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 CAT cat ADJ JJ Degree=Pos _ _ _ _ 3 reporter reporter NOUN NN Number=Sing _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 MT mt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 3515 # text = Finally, combined treatment of MT-I with 5-azacytidine and IFN-gamma induced re-expression of ICAM-I. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 treatment treatment NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 MT mt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 azacytidine azacytidine NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 gamma gamma NOUN NN Number=Sing _ _ _ _ 17 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 re-expression re-expression NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 ICAM ICAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3516 # text = Collectively, (a) transcriptional factor(s) necessary for expression of ICAM-I gene may be repressed in MT-I through DNA methylation. 1 Collectively collectively ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 a a X LS _ _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 s s X AFX _ _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 ICAM ICAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 gene gene PRON NN Number=Sing _ _ _ _ 19 may may AUX MD VerbForm=Fin _ _ _ _ 20 be be AUX VB VerbForm=Inf _ _ _ _ 21 repressed repress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 MT mt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 26 through through ADP IN _ _ _ _ _ 27 DNA dna NOUN NN Number=Sing _ _ _ _ 28 methylation methylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3517 # text = Three other ATL cell lines (TL-OmI, H582, HuT102) were found to have little mRNA for the LFA-I beta chain (CD18). 1 Three Three NUM CD NumType=Card _ _ _ _ 2 other other ADJ JJ Degree=Pos _ _ _ _ 3 ATL Atl ADJ JJ Degree=Pos _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 lines line NOUN NNS Number=Plur _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 TL TL NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 OmI OmI NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 H582 H582 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 HuT102 HuT102 X LS _ _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 have have VERB VB VerbForm=Inf _ _ _ _ 19 little little ADJ JJ Degree=Pos _ _ _ _ 20 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 LFA LFa NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 26 beta beof ADP IN Abbr=Yes _ _ _ _ 27 chain chain NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 18 18 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3518 # text = H582 and HuT102 were also negative for the LFA-I alpha chain (CDIIa) mRNA. 1 H582 H582 NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 HuT102 HuT102 NOUN NN Number=Sing _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 negative negative ADJ JJ Degree=Pos _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 LFA LFa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 12 alpha alpha X FW Foreign=Yes _ _ _ _ 13 chain chain NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 CDIIa CDIIa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 mRNA mRNa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3519 # text = No genomic changes were found, and a CAT reporter gene with the CD18 promoter was inactive in the 3 of them, again suggesting lack of (a) transcriptional factor(s) necessary for CD18 expression. 1 No no DET DT _ _ _ _ _ 2 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 3 changes change NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 CAT cat ADJ JJ Degree=Pos _ _ _ _ 10 reporter reporter NOUN NN Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 18 18 NUM CD NumType=Card _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 3 3 NUM CD NumType=Card _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 again again ADV RB _ _ _ _ _ 26 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 27 lack lack NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 a a X LS _ _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 33 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 s s X AFX _ _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 38 for for ADP IN _ _ _ _ _ 39 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 18 18 NUM CD NumType=Card _ _ _ _ 41 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3520 # text = Document 003003484 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003484 003003484 NUM CD NumType=Card _ _ _ _ 3 ends. ends. NOUN NN Number=Sing _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3521 # text = SOCS-3 is tyrosine phosphorylated in response to interleukin-2 and suppresses STAT5 phosphorylation and lymphocyte proliferation. 1 SOCS sOCs ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 3 3 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 tyrosine tyrosine PRON PRP _ _ _ _ _ 6 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 response response NOUN NN Number=Sing _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 interleukin interleukin VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 suppresses suppress VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 STAT5 STAT5 NUM CD NumType=Card _ _ _ _ 16 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 19 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3522 # text = Members of the recently discovered SOCS/CIS/SSI family have been proposed as regulators of cytokine signaling, and while targets and mechanisms have been suggested for some family members, the precise role of these proteins remains to be defined. 1 Members member NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 recently recently ADV RB _ _ _ _ _ 5 discovered discovered VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 SOCS/CIS sOCS/CIs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 SSI Ssi PROPN NNP Number=Sing _ _ _ _ 9 family family NOUN NN Number=Sing _ _ _ _ 10 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 12 proposed propose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 regulators regulator NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 17 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 while while SCONJ IN _ _ _ _ _ 21 targets target NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 24 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 26 suggested suggest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 some some DET DT _ _ _ _ _ 29 family family NOUN NN Number=Sing _ _ _ _ 30 members member NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 precise precise ADJ JJ Degree=Pos _ _ _ _ 34 role role NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 37 proteins protein NOUN NNS Number=Plur _ _ _ _ 38 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 to to PART TO _ _ _ _ _ 40 be be AUX VB VerbForm=Inf _ _ _ _ 41 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3523 # text = To date no SOCS proteins have been specifically implicated in interleukin-2 (IL-2) signaling in T cells. 1 To to ADP IN _ _ _ _ _ 2 date date NOUN NN Number=Sing _ _ _ _ 3 no no DET DT _ _ _ _ _ 4 SOCS sOCs NOUN NN Number=Sing _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 specifically specifically ADV RB _ _ _ _ _ 9 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 signaling signaling VERB VBG VerbForm=Ger _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3524 # text = Here we report SOCS-3 expression in response to IL-2 in both T-cell lines and human peripheral blood lymphocytes. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 SOCS SOCS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 3 3 NUM CD NumType=Card _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 response response NOUN NN Number=Sing _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 both both DET DT _ _ _ _ _ 16 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 lines line NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 22 blood blood NOUN NN Number=Sing _ _ _ _ 23 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3525 # text = SOCS-3 protein was detectable as early as 30 min following IL-2 stimulation, while CIS was seen only at low levels after 2 h. 1 SOCS sOCs ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 3 3 NUM CD NumType=Card _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 7 as as ADV RB _ _ _ _ _ 8 early early ADV RB Degree=Pos _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 30 30 NUM CD NumType=Card _ _ _ _ 11 min min NOUN NNS Number=Plur _ _ _ _ 12 following follow VERB VBG VerbForm=Ger _ _ _ _ 13 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 while while SCONJ IN _ _ _ _ _ 19 CIS CIS PRON DT Number=Sing|PronType=Dem _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 only only ADV RB _ _ _ _ _ 23 at at ADP IN _ _ _ _ _ 24 low low ADJ JJ Degree=Pos _ _ _ _ 25 levels level NOUN NNS Number=Plur _ _ _ _ 26 after after ADP IN _ _ _ _ _ 27 2 2 NUM CD NumType=Card _ _ _ _ 28 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3526 # text = Unlike CIS, SOCS-3 was rapidly tyrosine phosphorylated in response to IL-2. 1 Unlike unlike ADP IN _ _ _ _ _ 2 CIS CIS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 SOCS SOCS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 3 3 NUM CD NumType=Card _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 rapidly rapidly ADV RB _ _ _ _ _ 9 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 10 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 response response NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3527 # text = Tyrosine phosphorylation of SOCS-3 was observed upon coexpression with Jak1 and Jak2 but only weakly with Jak3. 1 Tyrosine Tyrosine NOUN NN Number=Sing _ _ _ _ 2 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 SOCS SOCS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 3 3 NUM CD NumType=Card _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 upon upon ADP IN _ _ _ _ _ 10 coexpression coexpression NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 Jak1 Jak1 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 Jak2 Jak2 NUM CD NumType=Card _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 only only ADV RB _ _ _ _ _ 17 weakly weakly ADV RB _ _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 Jak3 Jak3 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3528 # text = In these experiments, SOCS-3 associated with Jak1 and inhibited Jak1 phosphorylation, and this inhibition was markedly enhanced by the presence of IL-2 receptor beta chain (IL-2Rbeta). 1 In in ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 SOCS SOCS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 3 3 NUM CD NumType=Card _ _ _ _ 8 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 Jak1 Jak1 PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 Jak1 Jak1 PROPN NNP Number=Sing _ _ _ _ 14 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 18 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 markedly markedly ADV RB _ _ _ _ _ 21 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 presence presence NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ _ 29 receptor receptor NOUN NN Number=Sing _ _ _ _ 30 beta beta NOUN NN Number=Sing _ _ _ _ 31 chain chain NOUN NN Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 Rbeta Rbeta NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 3529 # text = Moreover, following IL-2 stimulation of T cells, SOCS-3 was able to interact with the IL-2 receptor complex, and in particular tyrosine phosphorylated Jak1 and IL-2Rbeta. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 following follow VERB VBG VerbForm=Ger _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 SOCS SOCS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 3 3 NUM CD NumType=Card _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 able able ADJ JJ Degree=Pos _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 interact interact VERB VB VerbForm=Inf _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ _ 24 receptor receptor NOUN NN Number=Sing _ _ _ _ 25 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 particular particular ADJ JJ Degree=Pos _ _ _ _ 30 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 31 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 Jak1 Jak1 PROPN NNP Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 Rbeta Rbeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 3530 # text = Additionally, in lymphocytes expressing SOCS-3 but not CIS, IL-2-induced tyrosine phosphorylation of STAT5b was markedly reduced, while there was only a weak effect on IL-3-mediated STAT5b tyrosine phosphorylation. 1 Additionally additionally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 5 expressing express VERB VBG VerbForm=Ger _ _ _ _ 6 SOCS SOCS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 3 3 NUM CD NumType=Card _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 CIS Cis PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 19 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 STAT5 stat5 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 b b NOUN NN Number=Sing _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 markedly markedly ADV RB _ _ _ _ _ 25 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 while while SCONJ IN _ _ _ _ _ 28 there there PRON EX _ _ _ _ _ 29 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 only only ADV RB _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 weak weak ADJ JJ Degree=Pos _ _ _ _ 33 effect effect NOUN NN Number=Sing _ _ _ _ 34 on on ADP IN _ _ _ _ _ 35 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 STAT5 stat5 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 b b NOUN NN Number=Sing _ _ _ _ 42 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 43 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 3531 # text = Finally, proliferation induced by both IL-2- and IL-3 was significantly inhibited in the presence of SOCS-3. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 both both DET DT _ _ _ _ _ 7 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 3 3 NUM CD NumType=Card _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 significantly significantly ADV RB _ _ _ _ _ 17 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 presence presence NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 SOCS SOCS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3532 # text = The findings suggest that when SOCS-3 is rapidly induced by IL-2 in T cells, it acts to inhibit IL-2 responses in a classical negative feedback loop. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 when when ADV WRB PronType=Int _ _ _ _ 6 SOCS SOCS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 3 3 NUM CD NumType=Card _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 rapidly rapidly ADV RB _ _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 21 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 24 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ _ 27 responses response NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 classical classical ADJ JJ Degree=Pos _ _ _ _ 31 negative negative ADJ JJ Degree=Pos _ _ _ _ 32 feedback feedback NOUN NN Number=Sing _ _ _ _ 33 loop loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3533 # text = Document 003003490 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003490 003003490 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3534 # text = HIV-1 LTR activity in human CD40-activated B lymphocytes is dependent on NF-kappaB. 1 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 LTR Ltr NOUN NN Number=Sing _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 -activated -activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 B b ADJ JJ Degree=Pos _ _ _ _ 11 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB. kappaB. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n # sent_id = 3535 # text = CD40-stimulated human B lymphocytes are highly permissive to a productive infection by the human immunodeficiency virus type 1. 1 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -stimulated -stimulated VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 highly highly ADV RB _ _ _ _ _ 8 permissive permissive ADJ JJ Degree=Pos _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 productive productive ADJ JJ Degree=Pos _ _ _ _ 12 infection infection NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 17 virus virus NOUN NN Number=Sing _ _ _ _ 18 type type NOUN NN Number=Sing _ _ _ _ 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3536 # text = In these cells, nuclear factors involved in activation of the HIV-1 LTR, which contains the transcriptional control elements of the virus, are unknown. 1 In in ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 factors factor NOUN NNS Number=Plur _ _ _ _ 7 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 HIV Hiv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 LTR Ltr NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 21 control control NOUN NN Number=Sing _ _ _ _ 22 elements element NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3537 # text = Transient expression assays with plasmids containing deleted parts of the LTR region linked to a reporter gene showed that the NF-kappaB binding site was essential for HIV-1 LTR activity in CD40-stimulated B lymphocytes. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 6 containing contain VERB VBG VerbForm=Ger _ _ _ _ 7 deleted delet VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 parts part NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 LTR LTR PROPN NNP Number=Sing _ _ _ _ 12 region region NOUN NN Number=Sing _ _ _ _ 13 linked link VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 reporter reporter NOUN NN Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 24 binding binding VERB VBG VerbForm=Ger _ _ _ _ 25 site site NOUN NN Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 essential essential ADJ JJ Degree=Pos _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 LTR Ltr NOUN NN Number=Sing _ _ _ _ 33 activity activity NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 B b NOUN NN Number=Sing _ _ _ _ 39 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 3538 # text = In addition, electrophoretic mobility shift and supershift assays revealed that important NF-kappaB binding activity composed of at least p50, p65, and c-Rel NF-kappaB subunits was present in nuclei of CD40-stimulated B cells. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 5 mobility mobility NOUN NN Number=Sing _ _ _ _ 6 shift shift NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 supershift supershift ADJ JJ Degree=Pos _ _ _ _ 9 assays assay NOUN NNS Number=Plur _ _ _ _ 10 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 important important ADJ JJ Degree=Pos _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 at at ADV RB _ _ _ _ _ 21 least least ADV RBS Degree=Sup _ _ _ _ 22 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 c c NOUN NN Abbr=Yes|Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 Rel Rel PROPN NNP Number=Sing _ _ _ _ 30 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 33 subunits subunit NOUN NNS Number=Plur _ _ _ _ 34 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 35 present present VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 CD40 CD40 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 - - PUNCT : _ _ _ _ SpaceAfter=No 41 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 B b ADJ JJ Degree=Pos _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 3539 # text = These results confirm at a molecular level the ability of HIV-1 to replicate in B cells and that this activity is strongly associated with NF-kappaB. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 confirm confirm VERB VB VerbForm=Inf _ _ _ _ 4 at at ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 7 level level NOUN NN Number=Sing _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 ability ability NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 replicate replicate VERB VB VerbForm=Inf _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 B b ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 strongly strongly ADV RB _ _ _ _ _ 25 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappaB. kappaB. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3540 # text = Document 003003493 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003493 003003493 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3541 # text = Oxidative stress triggers STAT3 tyrosine phosphorylation and nuclear translocation in human lymphocytes. 1 Oxidative Oxidative ADJ JJ Degree=Pos _ _ _ _ 2 stress stress NOUN NN Number=Sing _ _ _ _ 3 triggers trigger NOUN NNS Number=Plur _ _ _ _ 4 STAT3 STAT3 NUM CD NumType=Card _ _ _ _ 5 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 6 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 translocation translocation NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3542 # text = Oxidizing agents are powerful activators of factors responsible for the transcriptional activation of cytokine-encoding genes involved in tissue injury. 1 Oxidizing Oxidizing ADJ JJ Degree=Pos _ _ _ _ 2 agents agent NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 powerful powerful ADJ JJ Degree=Pos _ _ _ _ 5 activators activator NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 factors factor NOUN NNS Number=Plur _ _ _ _ 8 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 encoding encoding VERB VBG VerbForm=Ger _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 involved involved ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 tissue tissue ADJ JJ Degree=Pos _ _ _ _ 21 injury injury NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3543 # text = In this study we show evidence that STAT3 is a transcription factor whose activity is modulated by H2O2 in human lymphocytes, in which endogenous catalase had previously been inhibited. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 evidence evidence SCONJ IN _ _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 STAT3 STAT3 NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 modulated modulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 H2O2 H2O2 NUM CD NumType=Card _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 26 catalase catalase NOUN NN Number=Sing _ _ _ _ 27 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 previously previously ADV RB _ _ _ _ _ 29 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 30 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3544 # text = H2O2-induced nuclear translocation of STAT3 to form sequence-specific DNA-bound complexes was evidenced by immunoblotting of nuclear fractions and electrophoretic mobility shift assays, and vanadate was found to strongly synergize with H2O2. 1 H2O2 H2O2 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 translocation translocation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 STAT3 STAT3 NOUN NN Number=Sing _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 form form VERB VB VerbForm=Inf _ _ _ _ 10 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 bound bound ADJ JJ Degree=Pos _ _ _ _ 16 complexes complex NOUN NNS Number=Plur _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 evidenced evidence VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by SCONJ IN _ _ _ _ _ 20 immunoblotting immunoblott VERB VBG VerbForm=Ger _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 23 fractions fraction NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 26 mobility mobility NOUN NN Number=Sing _ _ _ _ 27 shift shift NOUN NN Number=Sing _ _ _ _ 28 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 vanadate vanadate NOUN NN Number=Sing _ _ _ _ 32 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 33 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 34 to to PART TO _ _ _ _ _ 35 strongly strongly ADV RB _ _ _ _ _ 36 synergize synergize VERB VB VerbForm=Inf _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 H2 H2 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 O2 O2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 3545 # text = Moreover, anti-STAT3 antibodies specifically precipitated a protein of 92 kDa that becomes phosphorylated on tyrosine upon lymphocyte treatment with H2O2. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 anti-STAT3 anti-STAT3 NUM CD NumType=Card _ _ _ _ 4 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 5 specifically specifically ADV RB _ _ _ _ _ 6 precipitated precipitate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 92 92 NUM CD NumType=Card _ _ _ _ 11 kDa kDa PROPN NNP Number=Sing _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 becomes become VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 17 upon upon ADP IN _ _ _ _ _ 18 lymphocyte lymphocyte ADJ JJ Degree=Pos _ _ _ _ 19 treatment treatment NOUN NN Number=Sing _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 H2 H2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 O2 O2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3546 # text = Phenylarsine oxide, a tyrosine phosphatase inhibitor, and genistein, a tyrosine kinase inhibitor, cooperated and cancelled, respectively, the H2O2-promoted STAT3 nuclear translocation. 1 Phenylarsine Phenylarsine VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 oxide oxide ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 6 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 7 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 genistein genistein VERB VB Mood=Imp|VerbForm=Fin _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 14 kinase kinase NOUN NN Number=Sing _ _ _ _ 15 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 cooperated cooperate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 cancelled cancell VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 H2O2 h2o2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 promoted promote VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 STAT3 STAT3 NUM CD NumType=Card _ _ _ _ 28 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 29 translocation translocation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3547 # text = Evidence is also presented, using Fe2+/Cu2+ ions, that.OH generated from H2O2 through Fenton reactions could be a candidate oxygen reactive species to directly activate STAT3. 1 Evidence evidence NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 presented present VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 using use VERB VBG VerbForm=Ger _ _ _ _ 7 Fe2+/Cu2 Fe2+/Cu2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 + + SYM SYM _ _ _ _ _ 9 ions ion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 that.OH that.Oh PROPN NNP Number=Sing _ _ _ _ 12 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 H2O2 H2O2 NOUN NN Number=Sing _ _ _ _ 15 through through ADP IN _ _ _ _ _ 16 Fenton Fenton PROPN NNP Number=Sing _ _ _ _ 17 reactions reaction NOUN NNS Number=Plur _ _ _ _ 18 could could AUX MD VerbForm=Fin _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 candidate candidate NOUN NN Number=Sing _ _ _ _ 22 oxygen oxygen ADJ JJ Degree=Pos _ _ _ _ 23 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 24 species species NOUN NNS Number=Plur _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 directly directly ADV RB _ _ _ _ _ 27 activate activate VERB VB VerbForm=Inf _ _ _ _ 28 STAT3 STAT3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3548 # text = Present data suggest that H2O2 and vanadate are likely to inhibit the activity of intracellular tyrosine phosphatase(s), leading to enhanced STAT3 tyrosine phosphorylation and hence its translocation to the nucleus. 1 Present present ADJ JJ Degree=Pos _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 H2O2 h2o2 NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 vanadate vanadate NOUN NN Number=Sing _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 likely likely ADJ JJ Degree=Pos _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 16 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 17 phosphatase phosphatase NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 s s X AFX _ _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 leading lead VERB VBG VerbForm=Ger _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 enhanced enhance VERB VB VerbForm=Inf _ _ _ _ 25 STAT3 STAT3 NUM CD NumType=Card _ _ _ _ 26 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 27 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 hence hence ADV RB _ _ _ _ _ 30 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 31 translocation translocation NOUN NN Number=Sing _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 3549 # text = These results demonstrate that the DNA binding activity of STAT3 can be modulated by oxidizing agents and provide a framework to understand the effects of oxidative stress on the JAK-STAT signaling pathway. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ _ 7 binding binding VERB VBG VerbForm=Ger _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 STAT3 STAT3 NOUN NN Number=Sing _ _ _ _ 11 can can AUX MD VerbForm=Fin _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 modulated modulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by SCONJ IN _ _ _ _ _ 15 oxidizing oxidize VERB VBG VerbForm=Ger _ _ _ _ 16 agents agent NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 provide provide VERB VB VerbForm=Inf _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 framework framework NOUN NN Number=Sing _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 understand understand VERB VB VerbForm=Inf _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 effects effect NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 27 stress stress NOUN NN Number=Sing _ _ _ _ 28 on on ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 JAK JAK NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 STAT STAT NOUN NN Number=Sing _ _ _ _ 33 signaling signaling NOUN NN Number=Sing _ _ _ _ 34 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3550 # text = Document 003003494 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003494 003003494 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3551 # text = 20-Epi analogues of 1,25-dihydroxyvitamin D3 are highly potent inducers of DRIP coactivator complex binding to the vitamin D3 receptor. 1 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 Epi Epi NOUN NN Number=Sing _ _ _ _ 4 analogues analogue NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT : _ _ _ _ SpaceAfter=No 8 dihydroxyvitamin dihydroxyvitamin NOUN NN Number=Sing _ _ _ _ 9 D3 D3 NOUN NN Number=Sing _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 highly highly ADV RB _ _ _ _ _ 12 potent potent ADJ JJ Degree=Pos _ _ _ _ 13 inducers inducer NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 DRIP drip NOUN NN Number=Sing _ _ _ _ 16 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 17 complex complex NOUN NN Number=Sing _ _ _ _ 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 vitamin vitamin NOUN NN Number=Sing _ _ _ _ 22 D3 D3 NOUN NN Number=Sing _ _ _ _ 23 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3552 # text = 1,25-Dihydroxyvitamin D3 (1,25(OH)2D3) plays a major role in the stimulation of bone growth, mineralization, and intestinal calcium and phosphate absorption; it also acts as a general inhibitor of cellular proliferation. 1 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 Dihydroxyvitamin Dihydroxyvitamin NOUN NN Number=Sing _ _ _ _ 4 D3 D3 NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 OH Oh INTJ UH _ _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 2D3 2D3 X LS _ _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 major major ADJ JJ Degree=Pos _ _ _ _ 15 role role NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 bone bone NOUN NN Number=Sing _ _ _ _ 21 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 mineralization mineralization NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 intestinal intestinal ADJ JJ Degree=Pos _ _ _ _ 27 calcium calcium NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 phosphate phosphate NOUN NN Number=Sing _ _ _ _ 30 absorption absorption NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ; ; PUNCT , _ _ _ _ _ 32 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 33 also also ADV RB _ _ _ _ _ 34 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 as as ADP IN _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 general general ADJ JJ Degree=Pos _ _ _ _ 38 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 41 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3553 # text = Several new, clinically relevant compounds dissociate antiproliferative and calcemic activities of 1,25(OH)2D3, but the molecular basis for this has not been clearly elucidated. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 new new ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 clinically clinically ADV RB _ _ _ _ _ 5 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 6 compounds compound NOUN NNS Number=Plur _ _ _ _ 7 dissociate dissociate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 antiproliferative antiproliferative ADJ JJ Degree=Pos _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 calcemic calcemic ADJ JJ Degree=Pos _ _ _ _ 11 activities activity NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 OH oh INTJ UH _ _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 2D3 2D3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 22 basis basis NOUN NN Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 25 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 not not PART RB _ _ _ _ _ 27 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 28 clearly clearly ADV RB _ _ _ _ _ 29 elucidated elucidate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3554 # text = Here, we tested whether the potency of one class of compounds, 20-epi analogues, to induce myeloid cell differentiation, is because of direct molecular effects on vitamin D receptor (VDR). 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 tested test VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 whether whether SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 potency potency NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 one one NUM CD NumType=Card _ _ _ _ 10 class class NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 compounds compound NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 epi epi NOUN NN Number=Sing _ _ _ _ 17 analogues analogue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 induce induce VERB VB VerbForm=Inf _ _ _ _ 21 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 because because ADP IN _ _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 direct direct ADJ JJ Degree=Pos _ _ _ _ 29 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 30 effects effect NOUN NNS Number=Plur _ _ _ _ 31 on on ADP IN _ _ _ _ _ 32 vitamin vitamin NOUN NN Number=Sing _ _ _ _ 33 D d NOUN NN Number=Sing _ _ _ _ 34 receptor receptor NOUN NN Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 VDR VDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 3555 # text = We report that two 20-epi analogues, MC1627 and MC1288, induced differentiation and transcription of p21(Waf1,Cip1), a key VDR target gene involved in growth inhibition, at a concentration 100-fold lower than that of 1,25(OH)2D3. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 epi epi NOUN NN Number=Sing _ _ _ _ 8 analogues analogue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 MC Mc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 1627 1627 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 MC1288 MC1288 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 p21 p21 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 Waf1 Waf1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ SpaceAfter=No 24 Cip1 Cip1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 key key ADJ JJ Degree=Pos _ _ _ _ 29 VDR VDR PROPN NNP Number=Sing _ _ _ _ 30 target target NOUN NN Number=Sing _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ _ 32 involved involved VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 growth growth NOUN NN Number=Sing _ _ _ _ 35 inhibition inhibition NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 at at ADP IN _ _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 concentration concentration NOUN NN Number=Sing _ _ _ _ 40 100 100 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 - - PUNCT : _ _ _ _ SpaceAfter=No 42 fold fold VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 lower lower ADJ JJR Degree=Cmp _ _ _ _ 44 than than ADP IN _ _ _ _ _ 45 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 OH oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 51 2D3 2D3 NUM CD NumType=Card _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 3556 # text = We compared this sensitivity to analogue effects on VDR interacting proteins: RXR, GRIP-1, and DRIP205, a subunit of the DRIP coactivator complex. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 compared compare VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 analogue analogue VERB VB VerbForm=Inf _ _ _ _ 7 effects effect NOUN NNS Number=Plur _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 VDR Vdr NOUN NN Number=Sing _ _ _ _ 10 interacting interacting VERB VBG VerbForm=Ger _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 : : PUNCT : _ _ _ _ _ 13 RXR Rxr NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 GRIP grip NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 DRIP205 DRIP205 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 subunit subunit NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 DRIP drip PROPN NNP Number=Sing _ _ _ _ 27 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 28 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3557 # text = Compared with the interaction of VDR with RXR or GRIP-1, the differentiation dose-response most closely correlated to the ligand-dependent recruitment of the DRIP coactivator complex to VDR and to the ability of the receptor to activate transcription in a cell-free system. 1 Compared compare VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 interaction interaction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 VDR VDR PROPN NNP Number=Sing _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 RXR RXR PROPN NNP Number=Sing _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 GRIP grip PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 16 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 response response NOUN NN Number=Sing _ _ _ _ 19 most most ADV RBS _ _ _ _ _ 20 closely closely ADV RB _ _ _ _ _ 21 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 27 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 DRIP drip PROPN NNP Number=Sing _ _ _ _ 31 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 32 complex complex NOUN NN Number=Sing _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 VDR VDR PROPN NNP Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 ability ability NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 receptor receptor NOUN NN Number=Sing _ _ _ _ 42 to to PART TO _ _ _ _ _ 43 activate activate VERB VB VerbForm=Inf _ _ _ _ 44 transcription transcription NOUN NN Number=Sing _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 47 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 free free ADJ JJ Degree=Pos _ _ _ _ 50 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 3558 # text = These results provide compelling links between the efficiency of the 20-epi analogue in inducing VDR/DRIP interactions, transactivation in vitro, and its enhanced ability to induce cellular differentiation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 compelling compelling ADJ JJ Degree=Pos _ _ _ _ 5 links link NOUN NNS Number=Plur _ _ _ _ 6 between between ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 efficiency efficiency NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 epi epi NOUN NN Number=Sing _ _ _ _ 14 analogue analogue NOUN NN Number=Sing _ _ _ _ 15 in in SCONJ IN _ _ _ _ _ 16 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 17 VDR VDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 / / PUNCT , _ _ _ _ SpaceAfter=No 19 DRIP drip NOUN NN Number=Sing _ _ _ _ 20 interactions interaction NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 28 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 ability ability NOUN NN Number=Sing _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 induce induce VERB VB VerbForm=Inf _ _ _ _ 33 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 34 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3559 # text = Document 003003495 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003495 003003495 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3560 # text = Expression of Th1 and Th2 type cytokines responding to HBsAg and HBxAg in chronic hepatitis B patients. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Th1 Th1 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 Th2 Th2 NUM CD NumType=Card _ _ _ _ 6 type type NOUN NN Number=Sing _ _ _ _ 7 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 8 responding respond VERB VBG VerbForm=Ger _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 HBsAg HBsAg PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 HBxAg HBxAg PROPN NNP Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 15 hepatitis hepatitis NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3561 # text = The cytokine pattern on viral antigen recognition is believed to exert a profound influence on the resolution of viral infections and viral clearance. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 3 pattern pattern NOUN NN Number=Sing _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 viral viral ADJ JJ Degree=Pos _ _ _ _ 6 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 7 recognition recognition NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 believed believe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 exert exert VERB VB VerbForm=Inf _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 profound profound ADJ JJ Degree=Pos _ _ _ _ 14 influence influence NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 resolution resolution NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 viral viral ADJ JJ Degree=Pos _ _ _ _ 20 infections infection NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 viral viral ADJ JJ Degree=Pos _ _ _ _ 23 clearance clearance NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3562 # text = This study was initiated to investigate whether a cytokine imbalance oriented toward Th2 type response plays a role in chronic hepatitis B. Cytokine profiles of peripheral blood mononuclear cells associated with chronic hepatitis 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 initiated initiate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 7 whether whether SCONJ IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 10 imbalance imbalance NOUN NN Number=Sing _ _ _ _ 11 oriented orient ADJ JJ Degree=Pos _ _ _ _ 12 toward toward ADP IN _ _ _ _ _ 13 Th2 Th2 NUM CD NumType=Card _ _ _ _ 14 type type NOUN NN Number=Sing _ _ _ _ 15 response response NOUN NN Number=Sing _ _ _ _ 16 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 role role NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 21 hepatitis hepatitis NOUN NN Number=Sing _ _ _ _ 22 B. B. PROPN NNP Number=Sing _ _ _ _ 23 Cytokine Cytokine PROPN NNP Number=Sing _ _ _ _ 24 profiles profile NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 27 blood blood NOUN NN Number=Sing _ _ _ _ 28 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 chronic chronic NOUN NN Number=Sing _ _ _ _ 33 hepatitis hepatitis NOUN NN Number=Sing _ _ _ _ # sent_id = 3563 # text = B were analysed by RT-PCR. 1 B benefit NOUN NN Number=Sing _ _ _ _ 2 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 analysed analyse VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 RT Rt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 PCR PCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 3564 # text = Upon HBsAg stimulation, expression of IFN-gamma, IL-2, IL-4, and IL-10 was detected in 41%, 8%, 41%, and 50% of the patients, respectively. 1 Upon upon ADP IN _ _ _ _ _ 2 HBsAg HBsAg ADJ JJ Degree=Pos _ _ _ _ 3 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 gamma gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 10 10 NUM CD NumType=Card _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 41 41 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 8 8 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 41 41 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 % % SYM NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 3565 # text = Among these cytokines, the expression of IFN-gamma was associated with high levels of serum AST/ALT. 1 Among among ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 gamma gamma NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 high high ADJ JJ Degree=Pos _ _ _ _ 15 levels level NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 serum serum NOUN NN Number=Sing _ _ _ _ 18 AST AST PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 / / PUNCT , _ _ _ _ SpaceAfter=No 20 ALT ALT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3566 # text = However, we could not prove that Th2 type cytokines had a protective effect on hepatocytes. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 could could AUX MD VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 prove prove VERB VB VerbForm=Inf _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 Th2 Th2 NUM CD NumType=Card _ _ _ _ 9 type type NOUN NN Number=Sing _ _ _ _ 10 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 11 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 protective protective ADJ JJ Degree=Pos _ _ _ _ 14 effect effect NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 hepatocytes hepatocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3567 # text = Upon HBxAg stimulation, there was no recognizable association of cytokine patterns with AST/ALT levels. 1 Upon upon ADP IN _ _ _ _ _ 2 HBxAg HBxAg ADJ JJ Degree=Pos _ _ _ _ 3 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 there there PRON EX _ _ _ _ _ 6 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 no no DET DT _ _ _ _ _ 8 recognizable recognizable ADJ JJ Degree=Pos _ _ _ _ 9 association association NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 12 patterns pattern NOUN NNS Number=Plur _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 AST Ast PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 ALT al VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3568 # text = In conclusion, production of a Th1 cytokine, IFN-gamma, by HBsAg-reactive cells was associated with hepatocyte damage in chronic hepatitis B, while no counteracting effect of Th2 cytokines produced by those cells was observed. 1 In in ADP IN _ _ _ _ _ 2 conclusion conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 production production NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 Th1 Th1 NUM CD NumType=Card _ _ _ _ 8 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 HBsAg HBsAg PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 hepatocyte hepatocyte NOUN NN Number=Sing _ _ _ _ 23 damage damage NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 26 hepatitis hepatitis NOUN NN Number=Sing _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 while while SCONJ IN _ _ _ _ _ 30 no no DET DT _ _ _ _ _ 31 counteracting counteract NOUN NN Number=Sing _ _ _ _ 32 effect effect NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 Th2 Th2 NUM CD NumType=Card _ _ _ _ 35 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 36 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 by by ADP IN _ _ _ _ _ 38 those those DET DT Number=Plur|PronType=Dem _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ _ 40 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 41 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3569 # text = Document 003003501 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003501 003003501 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3570 # text = Expression of the chemokine receptor BLR2/EBI1 is specifically transactivated by Epstein-Barr virus nuclear antigen 2. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 chemokine chemokine NOUN NN Number=Sing _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ _ 6 BLR2/EBI1 Blr2/ebi1 NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 specifically specifically ADV RB _ _ _ _ _ 9 transactivated transactivate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 Barr Barr PROPN NNP Number=Sing _ _ _ _ 14 virus virus NOUN NN Number=Sing _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 antigen antigen NOUN NN Number=Sing _ _ _ _ 17 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3571 # text = In our attempt to identify chemokine receptors that are related to Burkitt's lymphoma receptor 1 (BLR1) and are expressed in activated lymphocytes we used RT-PCR resulting in the isolation of a cDNA encoding a seven transmembrane receptor termed BLR2. 1 In in ADP IN _ _ _ _ _ 2 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 3 attempt attempt NOUN NN Number=Sing _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 identify identify VERB VB VerbForm=Inf _ _ _ _ 6 chemokine chemokine NOUN NN Number=Sing _ _ _ _ 7 receptors receptor NOUN NNS Number=Plur _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 related related ADJ JJ Degree=Pos _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 Burkitt Burkitt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 's 's PART POS _ _ _ _ _ 14 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 15 receptor receptor NOUN NN Number=Sing _ _ _ _ 16 1 1 NUM CD NumType=Card _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 BLR1 Blr1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 26 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 27 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 RT Rt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 PCR PCR PROPN NNP Number=Sing _ _ _ _ 31 resulting result VERB VBG VerbForm=Ger _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 isolation isolation NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 38 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 seven seven NUM CD NumType=Card _ _ _ _ 41 transmembrane transmembrane NOUN NN Number=Sing _ _ _ _ 42 receptor receptor NOUN NN Number=Sing _ _ _ _ 43 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 BLR2 Blr2 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 3572 # text = The protein shows significant sequence similarities to the family of G-protein coupled chemokine receptors and turned out to be identical to the recently described receptor EBI1. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 shows show VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 significant significant ADJ JJ Degree=Pos _ _ _ _ 5 sequence sequence NOUN NN Number=Sing _ _ _ _ 6 similarities similarity NOUN NNS Number=Plur _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 family family NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 G- G- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 coupled coupl VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 chemokine chemokine NOUN NN Number=Sing _ _ _ _ 15 receptors receptor NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 turned turn VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 out out ADP RP _ _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 be be AUX VB VerbForm=Inf _ _ _ _ 21 identical identical ADJ JJ Degree=Pos _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 recently recently ADV RB _ _ _ _ _ 25 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 receptor receptor NOUN NN Number=Sing _ _ _ _ 27 EBI1 Ebi1 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3573 # text = Northern blot analysis revealed that BLR2 mRNA could be highly stimulated in mitogen- and anti-CD3-treated peripheral blood lymphocytes. 1 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 BLR2 Blr2 NUM CD NumType=Card _ _ _ _ 7 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 8 could could AUX MD VerbForm=Fin _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 highly highly ADV RB _ _ _ _ _ 11 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 20 blood blood NOUN NN Number=Sing _ _ _ _ 21 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3574 # text = BLR2-specific mRNA could be detected in all Epstein-Barr virus positive B cell lines. 1 BLR2 Blr2 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 specific specific ADJ JJ Degree=Pos _ _ _ _ 4 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 5 could could AUX MD VerbForm=Fin _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 all all DET DT _ _ _ _ _ 10 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 Barr Barr PROPN NNP Number=Sing _ _ _ _ 13 virus virus NOUN NN Number=Sing _ _ _ _ 14 positive positive ADJ JJ Degree=Pos _ _ _ _ 15 B b ADJ JJ Degree=Pos _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3575 # text = We show that transcription of the BLR2 gene could be specifically induced in Epstein-Barr virus negative BL 41 cells via estrogen-mediated activation of Epstein-Barr virus nuclear antigen 2, a key regulator of viral and cellular genes in immortalized B cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 BLR2 Blr2 NOUN NN Number=Sing _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 could could AUX MD VerbForm=Fin _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 specifically specifically ADV RB _ _ _ _ _ 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 Barr Barr PROPN NNP Number=Sing _ _ _ _ 17 virus virus NOUN NN Number=Sing _ _ _ _ 18 negative negative ADJ JJ Degree=Pos _ _ _ _ 19 BL BL PROPN NNP Number=Sing _ _ _ _ 20 41 41 NUM CD NumType=Card _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 via via ADP IN _ _ _ _ _ 23 estrogen estrogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 -mediated -mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 Barr Barr PROPN NNP Number=Sing _ _ _ _ 30 virus virus NOUN NN Number=Sing _ _ _ _ 31 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 32 antigen antigen NOUN NN Number=Sing _ _ _ _ 33 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 key key ADJ JJ Degree=Pos _ _ _ _ 37 regulator regulator NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 viral viral ADJ JJ Degree=Pos _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 42 genes gene NOUN NNS Number=Plur _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 immortalized immortalized ADJ JJ Degree=Pos _ _ _ _ 45 B b ADJ JJ Degree=Pos _ _ _ _ 46 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 3576 # text = Our data suggest an involvement of BLR2 in the regulation of migration in activated lymphocytes and in viral pathogenesis. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 involvement involvement NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 BLR2 BLR2 NUM CD NumType=Card _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 regulation regulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 migration migration NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 activated activated ADJ JJ Degree=Pos _ _ _ _ 15 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 viral viral ADJ JJ Degree=Pos _ _ _ _ 19 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3577 # text = Document 003003502 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003502 003003502 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3578 # text = Functional roles of in vivo footprinted DNA motifs within an alpha-globin enhancer. 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 roles role NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 vivo vivo NOUN NN Number=Sing _ _ _ _ 6 footprinted footprint VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 DNA dna NOUN NN Number=Sing _ _ _ _ 8 motifs motif NOUN NNS Number=Plur _ _ _ _ 9 within within ADP IN _ _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 globin globin NOUN NN Number=Sing _ _ _ _ 14 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3579 # text = Erythroid lineage and developmental stage specificities. 1 Erythroid Erythroid ADJ JJ Degree=Pos _ _ _ _ 2 lineage lineage NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 5 stage stage NOUN NN Number=Sing _ _ _ _ 6 specificities specificity NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3580 # text = Transcriptional regulation of the human alpha-like globin genes, embryonic zeta 2 and adult alpha, during erythroid development is mediated by a distal enhancer, HS-40. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 like like ADJ JJ Degree=Pos _ _ _ _ 9 globin globin NOUN NN Number=Sing _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 embryonic embryonic ADJ JJ Degree=Pos _ _ _ _ 13 zeta zeta NOUN NN Number=Sing _ _ _ _ 14 2 2 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 adult adult NOUN NN Number=Sing _ _ _ _ 17 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 during during ADP IN _ _ _ _ _ 20 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 21 development development NOUN NN Number=Sing _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 distal distal ADJ JJ Degree=Pos _ _ _ _ 27 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 HS HS ADV RB _ _ _ _ SpaceAfter=No 30 - - SYM SYM _ _ _ _ SpaceAfter=No 31 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3581 # text = Previous protein-DNA binding studies have shown that HS-40 consists of multiple nuclear factor binding motifs that are occupied in vivo in an erythroid lineage- and developmental stage-specific manner. 1 Previous previous ADJ JJ Degree=Pos _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 DNA dna NOUN NN Number=Sing _ _ _ _ 5 binding binding VERB VBG VerbForm=Ger _ _ _ _ 6 studies study NOUN NNS Number=Plur _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 10 HS HS NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 40 40 NUM CD NumType=Card _ _ _ _ 13 consists consist NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 motifs motif NOUN NNS Number=Plur _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 occupied occupy VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 vivo vivo NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 28 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 32 stage stage NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 specific specific ADJ JJ Degree=Pos _ _ _ _ 35 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 3582 # text = We have systematically analyzed the functional roles of these factor binding motifs of HS-40 by site-directed mutagenesis and transient expression assay in erythroid cell cultures. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 systematically systematically ADV RB _ _ _ _ _ 4 analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 functional functional ADJ JJ Degree=Pos _ _ _ _ 7 roles role NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 motifs motif NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 HS HS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 40 40 NUM CD NumType=Card _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 transient transient ADJ JJ Degree=Pos _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 assay assay NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 cultures culture NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3583 # text = Three of these HS-40 enhancer motifs, 5'NF-E2/AP1, GT II, and GATA-1(c), positively regulate the zeta 2-globin promoter activity in embryonic/fetal erythroid K562 cells and the adult alpha-globin promoter activity in adult erythroid MEL cells. 1 Three three NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 HS H NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 40 40 NUM CD NumType=Card _ _ _ _ 7 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 8 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 5'NF- 5'NF- SYM NFP _ _ _ _ SpaceAfter=No 11 E2/AP1 E2/AP1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 GT GT PROPN NNP Number=Sing _ _ _ _ 14 II II PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 positively positively ADV RB _ _ _ _ _ 25 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 zeta zeta NOUN NN Number=Sing _ _ _ _ 28 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 globin globin NOUN NN Number=Sing _ _ _ _ 31 promoter promoter NOUN NN Number=Sing _ _ _ _ 32 activity activity NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 embryonic embryonic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 35 / / PUNCT , _ _ _ _ SpaceAfter=No 36 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 37 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 38 K562 k562 NUM CD NumType=Card _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 adult adult NOUN NN Number=Sing _ _ _ _ 43 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 globin globin NOUN NN Number=Sing _ _ _ _ 46 promoter promoter NOUN NN Number=Sing _ _ _ _ 47 activity activity NOUN NN Number=Sing _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 adult adult ADJ JJ Degree=Pos _ _ _ _ 50 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 51 MEL Mel NOUN NN Number=Sing _ _ _ _ 52 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 3584 # text = On the other hand, the 3'NF-E2/AP1 motif is able to exert both positive and negative regulatory effects on the zeta 2-globin promoter activity in K562 cells, and this dual function appears to be modulated through differential binding of the ubiquitous AP1 factors and the erythroid-enriched NF-E2 factor. 1 On on ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 hand hand NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 3'NF 3'nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 E2 e2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 AP1 Ap1 NUM CD NumType=Card _ _ _ _ 12 motif motif NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 able able ADJ JJ Degree=Pos _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 exert exert VERB VB VerbForm=Inf _ _ _ _ 17 both both CCONJ CC _ _ _ _ _ 18 positive positive ADJ JJ Degree=Pos _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 negative negative ADJ JJ Degree=Pos _ _ _ _ 21 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 22 effects effect NOUN NNS Number=Plur _ _ _ _ 23 on on ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 zeta zeta NOUN NN Number=Sing _ _ _ _ 26 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 globin globin NOUN NN Number=Sing _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ _ 30 activity activity NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 K562 K562 NUM CD NumType=Card _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 37 dual dual ADJ JJ Degree=Pos _ _ _ _ 38 function function NOUN NN Number=Sing _ _ _ _ 39 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 40 to to PART TO _ _ _ _ _ 41 be be AUX VB VerbForm=Inf _ _ _ _ 42 modulated modulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 43 through through ADP IN _ _ _ _ _ 44 differential differential ADJ JJ Degree=Pos _ _ _ _ 45 binding binding NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 49 AP1 Ap1 NUM CD NumType=Card _ _ _ _ 50 factors factor NOUN NNS Number=Plur _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 the the DET DT Definite=Def|PronType=Art _ _ _ _ 53 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 enriched enrich VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 56 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 E2 e2 NUM CD NumType=Card _ _ _ _ 59 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 3585 # text = Mutation in the GATA-1(d) motif, which exhibits an adult erythroid-specific genomic footprint, decreases the HS-40 enhancer function in dimethyl sulfoxide-induced MEL cells but not in K562 cells. 1 Mutation Mutation NOUN NN Number=Sing _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 GATA GATA NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 d would PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 exhibits exhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 adult adult ADJ JJ Degree=Pos _ _ _ _ 16 erythroid erythroid NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 specific specific ADJ JJ Degree=Pos _ _ _ _ 19 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 20 footprint footprint NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 decreases decrease VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 HS HS NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 40 40 NUM CD NumType=Card _ _ _ _ 27 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 28 function function NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 dimethyl dimethyl ADJ JJ Degree=Pos _ _ _ _ 31 sulfoxide sulfoxide NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 MEL MEL PROPN NNP Number=Sing _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ _ 36 but but CCONJ CC _ _ _ _ _ 37 not not PART RB _ _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 K562 K562 NUM CD NumType=Card _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 3586 # text = These studies have defined the regulatory roles of the different HS-40 motifs. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 defined define VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 7 roles role NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 different different ADJ JJ Degree=Pos _ _ _ _ 11 HS H NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 40 40 NUM CD NumType=Card _ _ _ _ 14 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3587 # text = The remarkable correlation between genomic footprinting data and the mutagenesis results also suggests that the erythroid lineage- and developmental stage-specific regulation of human alpha-like globin promoters is indeed modulated by stable binding of specific nuclear factors in vivo. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 remarkable remarkable ADJ JJ Degree=Pos _ _ _ _ 3 correlation correlation NOUN NN Number=Sing _ _ _ _ 4 between between ADP IN _ _ _ _ _ 5 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 6 footprinting footprinting NOUN NN Number=Sing _ _ _ _ 7 data data NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 mutagenesis mutagenesis ADJ JJ Degree=Pos _ _ _ _ 11 results result NOUN NNS Number=Plur _ _ _ _ 12 also also ADV RB _ _ _ _ _ 13 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 17 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 21 stage stage NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 specific specific ADJ JJ Degree=Pos _ _ _ _ 24 regulation regulation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 like like ADJ JJ Degree=Pos _ _ _ _ 30 globin globin NOUN NN Number=Sing _ _ _ _ 31 promoters promoter NOUN NNS Number=Plur _ _ _ _ 32 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 indeed indeed ADV RB _ _ _ _ _ 34 modulated modulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 stable stable ADJ JJ Degree=Pos _ _ _ _ 37 binding binding NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 specific specific ADJ JJ Degree=Pos _ _ _ _ 40 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 41 factors factor NOUN NNS Number=Plur _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 vivo. vivo. NOUN NN Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3588 # text = Document 003003503 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003503 003003503 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3589 # text = Expression of c-fos, c-jun and jun B in peripheral blood lymphocytes from young and elderly adults. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 c- c- PUNCT : _ _ _ _ SpaceAfter=No 4 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 c- c- SYM NFP _ _ _ _ SpaceAfter=No 7 jun jun NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 jun jun NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 13 blood blood NOUN NN Number=Sing _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 young young ADJ JJ Degree=Pos _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 elderly elderly ADJ JJ Degree=Pos _ _ _ _ 19 adults adult NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3590 # text = The expression of c-fos, c-jun and jun B proto-oncogenes was studied in phytohemagglutinin (PHA) activated peripheral blood lymphocytes (PBL) from young and aged humans. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 c- c- PUNCT : _ _ _ _ SpaceAfter=No 5 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 c- c- SYM NFP _ _ _ _ SpaceAfter=No 8 jun jun NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 jun jun NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 -oncogenes -oncogene NOUN NNS Number=Plur _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 phytohemagglutinin phytohemagglutinin NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 PHA PHA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 23 blood blood NOUN NN Number=Sing _ _ _ _ 24 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 PBL PBL INTJ UH _ _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 from from ADP IN _ _ _ _ _ 29 young young ADJ JJ Degree=Pos _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 aged aged ADJ JJ Degree=Pos _ _ _ _ 32 humans human NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3591 # text = Specific mRNAs for c-fos and c-jun were detectable within 30 min after cell activation and reached maximal levels within 2 h. 1 Specific specific ADJ JJ Degree=Pos _ _ _ _ 2 mRNAs mRNA NOUN NNS Number=Plur _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 fos fo NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 c- c- SYM NFP _ _ _ _ SpaceAfter=No 9 jun jun NOUN NN Number=Sing _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 12 within within ADP IN _ _ _ _ _ 13 30 30 NUM CD NumType=Card _ _ _ _ 14 min min NOUN NNS Number=Plur _ _ _ _ 15 after after ADP IN _ _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 reached reach VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 21 levels level NOUN NNS Number=Plur _ _ _ _ 22 within within ADP IN _ _ _ _ _ 23 2 2 NUM CD NumType=Card _ _ _ _ 24 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3592 # text = Both c-fos and jun B mRNAs decreased to pre-activation levels within 6 h, while c-jun mRNA remained elevated. 1 Both both DET DT _ _ _ _ _ 2 c- c- SYM NFP _ _ _ _ SpaceAfter=No 3 fos fo NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 jun jun NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 mRNAs mRNA AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 pre-activation pre-activation NOUN NN Number=Sing _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ _ 12 within within ADP IN _ _ _ _ _ 13 6 6 NUM CD NumType=Card _ _ _ _ 14 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 while while SCONJ IN _ _ _ _ _ 17 c- c- SYM NFP _ _ _ _ SpaceAfter=No 18 jun jun PROPN NNP Number=Sing _ _ _ _ 19 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 20 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3593 # text = In PHA-activated PBL, no age-related differences were observed in c-fos or jun B mRNA expression. 1 In in ADP IN _ _ _ _ _ 2 PHA PHA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 PBL pBl NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 no no DET DT _ _ _ _ _ 8 age age NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 related related ADJ JJ Degree=Pos _ _ _ _ 11 differences difference NOUN NNS Number=Plur _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 fos fo NOUN NNS Number=Plur _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 jun jun VERB VB VerbForm=Inf _ _ _ _ 20 B b PROPN NNP Number=Sing _ _ _ _ 21 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3594 # text = However, c-jun mRNA levels decreased significantly (1.73 +/- 0.08 vs. 1.16 +/- 0.09 arbitrary units, P < 0.01, young vs. old) in PBL from elderly individuals activated with PHA. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 c- c- SYM NFP _ _ _ _ SpaceAfter=No 4 jun jun ADJ JJ Degree=Pos _ _ _ _ 5 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 significantly significantly ADV RB _ _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 1.73 1.73 NUM CD NumType=Card _ _ _ _ 11 +/- +/- SYM SYM _ _ _ _ _ 12 0.08 0.08 NUM CD NumType=Card _ _ _ _ 13 vs. versus ADP IN _ _ _ _ _ 14 1.16 1.16 NUM CD NumType=Card _ _ _ _ 15 +/- +/- SYM SYM _ _ _ _ _ 16 0.09 0.09 NUM CD NumType=Card _ _ _ _ 17 arbitrary arbitrary ADJ JJ Degree=Pos _ _ _ _ 18 units unit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 P P PROPN NNP Number=Sing _ _ _ _ 21 < < PUNCT -LRB- _ _ _ _ _ 22 0.01 0.01 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 young young ADJ JJ Degree=Pos _ _ _ _ 25 vs. vs. CCONJ CC _ _ _ _ _ 26 old old ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 PBL PBL PROPN NNP Number=Sing _ _ _ _ 30 from from ADP IN _ _ _ _ _ 31 elderly elderly ADJ JJ Degree=Pos _ _ _ _ 32 individuals individual NOUN NNS Number=Plur _ _ _ _ 33 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 PHA PHa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 3595 # text = Because previous work has demonstrated that T cells from elderly individuals may display normal proliferative responses when activated via the anti-CD2 pathway, c-jun and jun B mRNA expression was also studied in anti-CD2-activated purified T cells. 1 Because because SCONJ IN _ _ _ _ _ 2 previous previous ADJ JJ Degree=Pos _ _ _ _ 3 work work NOUN NN Number=Sing _ _ _ _ 4 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 elderly elderly ADJ JJ Degree=Pos _ _ _ _ 11 individuals individual NOUN NNS Number=Plur _ _ _ _ 12 may may AUX MD VerbForm=Fin _ _ _ _ 13 display display VERB VB VerbForm=Inf _ _ _ _ 14 normal normal ADJ JJ Degree=Pos _ _ _ _ 15 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 16 responses response NOUN NNS Number=Plur _ _ _ _ 17 when when ADV WRB PronType=Int _ _ _ _ 18 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 via via ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 anti-CD2 anti-cd2 NOUN NN Number=Sing _ _ _ _ 22 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 c- c- SYM NFP _ _ _ _ SpaceAfter=No 25 jun jun NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 jun jun NOUN NN Number=Sing _ _ _ _ 28 B b PROPN NNP Number=Sing _ _ _ _ 29 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 32 also also ADV RB _ _ _ _ _ 33 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 anti-CD2 anti-CD2 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 -activated -activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 purified purify ADJ JJ Degree=Pos _ _ _ _ 38 T t PROPN NNP Number=Sing _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 3596 # text = No age-related differences were found in the expression of either of these two proto-oncogenes by anti-CD2 activated T cells. 1 No no DET DT _ _ _ _ _ 2 age age NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 related related ADJ JJ Degree=Pos _ _ _ _ 5 differences difference NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 either either DET DT _ _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 15 two two NUM CD NumType=Card _ _ _ _ 16 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 -oncogenes -oncogene NOUN NNS Number=Plur _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 anti-CD2 anti-CD2 NUM CD NumType=Card _ _ _ _ 20 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 T t NUM CD NumType=Card _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3597 # text = These results suggest that the decreased IL-2 production and proliferative response displayed by PHA-activated PBL from elderly adults may be related to age-related changes in c-jun mRNA expression and in the ratio of c-fos to c-jun mRNA. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 production production NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 13 response response NOUN NN Number=Sing _ _ _ _ 14 displayed display VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 PHA PHA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 PBL pBl NOUN NN Number=Sing _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 elderly elderly ADJ JJ Degree=Pos _ _ _ _ 22 adults adult NOUN NNS Number=Plur _ _ _ _ 23 may may AUX MD VerbForm=Fin _ _ _ _ 24 be be AUX VB VerbForm=Inf _ _ _ _ 25 related related ADJ JJ Degree=Pos _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 age age NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 related related ADJ JJ Degree=Pos _ _ _ _ 30 changes change NOUN NNS Number=Plur _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 c- c- SYM NFP _ _ _ _ SpaceAfter=No 33 jun jun NOUN NN Number=Sing _ _ _ _ 34 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 ratio ratio NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 fos fo NOUN NNS Number=Plur _ _ _ _ 44 to to ADP IN _ _ _ _ _ 45 c- c- SYM NFP _ _ _ _ SpaceAfter=No 46 jun jun PROPN NNP Number=Sing _ _ _ _ 47 mRNA. mRNA. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3598 # text = Document 003003506 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003506 003003506 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3599 # text = Lineage-specific activation of STAT3 by interferon-gamma in human neutrophils. 1 Lineage Lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 specific specific ADJ JJ Degree=Pos _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 STAT3 STAT3 NUM CD NumType=Card _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 interferon interferon NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT : _ _ _ _ SpaceAfter=No 10 gamma gamma NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3600 # text = Binding of interferon-gamma (IFN-gamma) to its heterodimeric receptor induces activation of the tyrosine kinases JAK1 and JAK2 followed by tyrosine phosphorylation of STAT1alpha. 1 Binding binding NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 interferon interferon ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 gamma gamma NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 heterodimeric heterodimeric ADJ JJ Degree=Pos _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 induces induce NOUN NNS Number=Plur _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 20 kinases kinase NOUN NNS Number=Plur _ _ _ _ 21 JAK1 JAK1 NUM CD NumType=Card _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 JAK2 JAK2 NUM CD NumType=Card _ _ _ _ 24 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 27 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 STAT1 STAT1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3601 # text = Selective activation of STAT1alpha at the IFN-gamma receptor is achieved by specific interaction between a cytosolic tyrosine motif including Y440 in the IFN-gamma receptor alpha-chain and the SH2 domain of STAT1alpha. 1 Selective selective ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 STAT1 STAT1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 alpha alpha NOUN NN Number=Sing _ _ _ _ 6 at at ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 gamma gamma NOUN NN Number=Sing _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 achieved achieve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 specific specific ADJ JJ Degree=Pos _ _ _ _ 16 interaction interaction NOUN NN Number=Sing _ _ _ _ 17 between between ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 20 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 21 motif motif SCONJ IN _ _ _ _ _ 22 including include VERB VBG VerbForm=Ger _ _ _ _ 23 Y440 Y440 NUM CD NumType=Card _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 gamma gamma NOUN NN Number=Sing _ _ _ _ 29 receptor receptor NOUN NN Number=Sing _ _ _ _ 30 alpha- alpha- SYM NFP _ _ _ _ SpaceAfter=No 31 chain chain NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 SH2 Sh2 NOUN NN Number=Sing _ _ _ _ 35 domain domain NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 STAT1 STAT1 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 3602 # text = We demonstrate that, in addition to STAT1alpha, STAT3 is also activated by IFN-gamma in human neutrophils. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 addition addition NOUN NN Number=Sing _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 STAT1 STAT1 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 STAT3 STAT3 NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 also also ADV RB _ _ _ _ _ 14 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 gamma gamma NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3603 # text = The activation of STAT3 was not found in human eosinophils, monocytes, and HL-60 cells, although the STAT3 protein was expressed in these cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 STAT3 STAT3 NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 HL HL ADV RB _ _ _ _ SpaceAfter=No 16 - - SYM SYM _ _ _ _ SpaceAfter=No 17 60 60 NUM CD NumType=Card _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 although although SCONJ IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 STAT3 STAT3 NOUN NN Number=Sing _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3604 # text = The cell type-specific activation of STAT3 by IFN-gamma was also observed in neutrophils that are differentiated in vitro from human CD34+ hematopoietic stem cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 STAT3 STAT3 NUM CD NumType=Card _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 gamma gamma NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 vitro vitro NOUN NN Number=Sing _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 CD34 CD34 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 + + SYM SYM _ _ _ _ _ 27 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 28 stem stem NOUN NN Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3605 # text = These results indicate that a single cytokine receptor can activate different 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 single single ADJ JJ Degree=Pos _ _ _ _ 7 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 can can AUX MD VerbForm=Fin _ _ _ _ 10 activate activate VERB VB VerbForm=Inf _ _ _ _ 11 different different ADJ JJ Degree=Pos _ _ _ _ # sent_id = 3606 # text = STAT family members in a cell-specific manner, which might result in cell-specific gene transcription. 1 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 2 family family NOUN NN Number=Sing _ _ _ _ 3 members member NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 might might AUX MD VerbForm=Fin _ _ _ _ 13 result result VERB VB VerbForm=Inf _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3607 # text = Document 003003508 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003508 003003508 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3608 # text = Identification and purification of human Stat proteins activated in response to interleukin-2. 1 Identification identification NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 purification purification NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 Stat Stat PROPN NNP Number=Sing _ _ _ _ 7 proteins protein NOUN NNS Number=Plur _ _ _ _ 8 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 response response NOUN NN Number=Sing _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 interleukin interleukin VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3609 # text = A key cytokine induced during the immune response is IL-2. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 key key ADJ JJ Degree=Pos _ _ _ _ 3 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 during during ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 immune immune ADJ JJ Degree=Pos _ _ _ _ 8 response response NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 3610 # text = Following T cell activation, the genes encoding IL-2 and the various chains of its receptor are transcriptionally induced. 1 Following follow VERB VBG VerbForm=Ger _ _ _ _ 2 T t PROPN NNP Number=Sing _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 genes gene NOUN NNS Number=Plur _ _ _ _ 8 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 various various ADJ JJ Degree=Pos _ _ _ _ 15 chains chain NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 receptor receptor NOUN NN Number=Sing _ _ _ _ 19 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 transcriptionally transcriptionally ADV RB _ _ _ _ _ 21 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3611 # text = In turn, secreted IL-2 serves to stimulate the proliferation and differentiation of T lymphocytes. 1 In in ADP IN _ _ _ _ _ 2 turn turn NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 secreted secret VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 serves serf NOUN NNS Number=Plur _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3612 # text = Several recent studies have implicated Jak kinases in the signaling pathway induced by IL-2. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 recent recent ADJ JJ Degree=Pos _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 implicated implicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 Jak Jak PROPN NNP Number=Sing _ _ _ _ 7 kinases kinase NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 signaling signaling NOUN NN Number=Sing _ _ _ _ 11 pathway pathway NOUN NN Number=Sing _ _ _ _ 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3613 # text = Following this lead, we set out to identify transcription factors induced in response to IL-2. 1 Following follow VERB VBG VerbForm=Ger _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 lead lead NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 set set VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 out out ADP RP _ _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 identify identify VERB VB VerbForm=Inf _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ _ 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 response response NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3614 # text = Human peripheral blood lymphocytes were observed to contain several IL-2-inducible DNA binding activities. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 3 blood blood NOUN NN Number=Sing _ _ _ _ 4 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 contain contain VERB VB VerbForm=Inf _ _ _ _ 9 several several ADJ JJ Degree=Pos _ _ _ _ 10 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 15 DNA dna NOUN NN Number=Sing _ _ _ _ 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 activities activity NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3615 # text = Similar activities were also observed in a transformed human lymphocyte line, termed YT. 1 Similar similar ADJ JJ Degree=Pos _ _ _ _ 2 activities activity NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 11 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 YT YT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3616 # text = We have purified these activities and found that the principal IL-2-inducible component bears significant relatedness to a prolactin-induced transcription factor first identified in sheep mammary gland tissue. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 activities activity NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 principal principal NOUN NN Number=Sing _ _ _ _ 11 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 16 component component ADJ JJ Degree=Pos _ _ _ _ 17 bears bear NOUN NNS Number=Plur _ _ _ _ 18 significant significant ADJ JJ Degree=Pos _ _ _ _ 19 relatedness relatedness NOUN NN Number=Sing _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 prolactin- prolactin- SYM SYM _ _ _ _ SpaceAfter=No 23 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 first first ADV RB _ _ _ _ _ 27 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 sheep sheep ADJ JJ Degree=Pos _ _ _ _ 30 mammary mammary ADJ JJ Degree=Pos _ _ _ _ 31 gland gland NOUN NN Number=Sing _ _ _ _ 32 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3617 # text = We hypothesize that activation of this protein, designated hStat5, helps govern the biological effects of IL-2 during the immune response. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 hypothesize hypothesize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 hStat5 hstat5 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 helps help VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 govern govern ADJ JJ Degree=Pos _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 biological biological ADJ JJ Degree=Pos _ _ _ _ 16 effects effect NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 during during ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 immune immune ADJ JJ Degree=Pos _ _ _ _ 24 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3618 # text = Document 003003514 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003514 003003514 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3619 # text = Retinoic acid activates interferon regulatory factor-1 gene expression in myeloid cells. 1 Retinoic Retinoic ADJ JJ Degree=Pos _ _ _ _ 2 acid acid ADJ JJ Degree=Pos _ _ _ _ 3 activates activate NOUN NNS Number=Plur _ _ _ _ 4 interferon interferon ADP IN _ _ _ _ _ 5 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3620 # text = All-trans-retinoic acid (ATRA) is the drug of choice in the treatment of acute promyelocytic leukemia (APL). 1 All all DET DT _ _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 6 acid acid NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 ATRA ATRA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 drug drug NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 choice choice NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 treatment treatment NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 acute acute ADJ JJ Degree=Pos _ _ _ _ 20 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ _ 21 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 APL APL NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3621 # text = ATRA induces both in vitro and in vivo differentiation of APL cells into mature granulocytes. 1 ATRA Atra PROPN NNP Number=Sing _ _ _ _ 2 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 both both CCONJ CC _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 vitro vitro NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 vivo vivo NOUN NN Number=Sing _ _ _ _ 9 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 APL Apl ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 into into ADP IN _ _ _ _ _ 14 mature mature ADJ JJ Degree=Pos _ _ _ _ 15 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 3622 # text = However, the molecular mechanisms involved in ATRA-dependent growth inhibition and cellular differentiation are not presently understood. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 5 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 6 involved involve ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 ATRA ATRA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 11 growth growth NOUN NN Number=Sing _ _ _ _ 12 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 not not PART RB _ _ _ _ _ 18 presently presently ADV RB _ _ _ _ _ 19 understood understand ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3623 # text = The NB4 cell line, which is derived from the bone marrow of a patient with APL during relapse, can be used as a model system to study the growth and differentiation of APL cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 NB4 NB4 NUM CD NumType=Card _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 derived derive VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 bone bone NOUN NN Number=Sing _ _ _ _ 12 marrow marrow NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 patient patient NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 APL Apl NOUN NNS Number=Plur _ _ _ _ 18 during during ADP IN _ _ _ _ _ 19 relapse relapse NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 can can AUX MD VerbForm=Fin _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 model model NOUN NN Number=Sing _ _ _ _ 27 system system NOUN NN Number=Sing _ _ _ _ 28 to to PART TO _ _ _ _ _ 29 study study VERB VB VerbForm=Inf _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 growth growth NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 APL Apl ADJ JJ Degree=Pos _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3624 # text = Because interferon (IFN) regulatory factors (IRF-1 and IRF-2) and other IFN-inducible gene products regulate cell growth, we analyzed the effects of ATRA on the expression of these genes. 1 Because because SCONJ IN _ _ _ _ _ 2 interferon interferon PROPN NNP Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 7 factors factor NOUN NNS Number=Plur _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 IRF IRF NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 X LS _ _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 other other ADJ JJ Degree=Pos _ _ _ _ 19 IFN Ifn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 products product NOUN NNS Number=Plur _ _ _ _ 24 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 29 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 effects effect NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 ATRA ATRA PROPN NNP Number=Sing _ _ _ _ 34 on on ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 39 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 3625 # text = We show that ATRA directly activates IRF-1 gene expression, followed by activation of IRF-2 and 2'-5' oligoadenylate synthetase (OAS) gene expression with slower kinetics. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 ATRA ATRA PROPN NNP Number=Sing _ _ _ _ 5 directly directly ADV RB _ _ _ _ _ 6 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 23 - - SYM SYM _ _ _ _ SpaceAfter=No 24 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ' ' PUNCT `` _ _ _ _ _ 26 oligoadenylate oligoadenylate ADJ JJ Degree=Pos _ _ _ _ 27 synthetase synthetase NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 OAS OAS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 gene gene ADJ JJ Degree=Pos _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 slower slower NOUN NN Number=Sing _ _ _ _ 35 kinetics kinetic NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 3626 # text = In addition to NB4 cells, ATRA also activated IRF-1 gene expression in HL-60, U937, and THP-1 cells, which all respond to ATRA by growth inhibition. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 NB4 NB4 NUM CD NumType=Card _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 ATRA ATRA PROPN NNP Number=Sing _ _ _ _ 8 also also ADV RB _ _ _ _ _ 9 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 60 60 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 U937 U937 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 which which PRON WDT PronType=Rel _ _ _ _ 29 all all DET DT _ _ _ _ _ 30 respond respond NOUN NN Number=Sing _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 ATRA ATRA PROPN NNP Number=Sing _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 growth growth NOUN NN Number=Sing _ _ _ _ 35 inhibition inhibition NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 3627 # text = A more than additive increase in IRF-1 gene expression was seen with ATRA and IFN-gamma in NB4 cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 more more ADJ JJR Degree=Cmp _ _ _ _ 3 than than ADP IN _ _ _ _ _ 4 additive additive ADJ JJ Degree=Pos _ _ _ _ 5 increase increase NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 ATRA ATRA PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 gamma gamma NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 NB4 NB4 NUM CD NumType=Card _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3628 # text = ATRA did not activate nuclear factor kappa B or signal transducer and activator of transcription (STAT) activation pathways, suggesting that an alternate mechanism is involved in IRF-1 gene activation. 1 ATRA ATRA ADV RB _ _ _ _ _ 2 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 not not PART RB _ _ _ _ _ 4 activate activate VERB VB VerbForm=Inf _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 signal signal NOUN NN Number=Sing _ _ _ _ 11 transducer transducer NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 activator activator NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 STAT STAT NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 alternate alternate ADJ JJ Degree=Pos _ _ _ _ 26 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 involved involved ADJ JJ Degree=Pos _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ _ 34 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 3629 # text = The ATRA-induced expression of IRF-1, an activator of transcription and repressor of transformation, may be one of the molecular mechanisms of ATRA-induced growth inhibition, and the basis for the synergistic actions of ATRA and IFNs in myeloid leukemia cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ATRA ATRa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 activator activator NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 repressor repressor NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 transformation transformation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 may may AUX MD VerbForm=Fin _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 one one NUM CD NumType=Card _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 26 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 ATRA ATRA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 growth growth NOUN NN Number=Sing _ _ _ _ 32 inhibition inhibition NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 basis basis NOUN NN Number=Sing _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 40 actions action NOUN NNS Number=Plur _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 ATRA ATRa PROPN NNP Number=Sing _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 IFNs IFN PROPN NNP Number=Sing _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 47 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 48 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3630 # text = Document 003003516 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003516 003003516 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3631 # text = Differential nuclear localization of p50, p52, and RelB proteins in human accessory cells of the immune response in situ. 1 Differential differential ADJ JJ Degree=Pos _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 localization localization NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 p52 p52 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 RelB Relb VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 accessory accessory ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 immune immune ADJ JJ Degree=Pos _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 situ situ NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3632 # text = The Rel/NF-kappa B proteins, p50, p52, p65, c-Rel, and RelB, constitute a family of transcription factors involved in the positive regulation of a variety of genes during the immune response. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Rel/ rel/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 p52 p52 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 RelB RelB VERB VB Mood=Imp|VerbForm=Fin _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 constitute constitute VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 family family NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 factors factor NOUN NNS Number=Plur _ _ _ _ 28 involved involved ADJ JJ Degree=Pos _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 positive positive ADJ JJ Degree=Pos _ _ _ _ 32 regulation regulation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 variety variety NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 genes gene NOUN NNS Number=Plur _ _ _ _ 38 during during ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 immune immune ADJ JJ Degree=Pos _ _ _ _ 41 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3633 # text = Recently, it has been shown that RelB knockout mice have no dendritic cells (DC). 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 4 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 6 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 RelB Relb NOUN NN Number=Sing _ _ _ _ 9 knockout knockout ADP IN _ _ _ _ _ 10 mice mouse NOUN NNS Number=Plur _ _ _ _ 11 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 no no DET DT _ _ _ _ _ 13 dendritic dendritic ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 DC DC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3634 # text = An overexpression of p50 has been described in follicular dendritic cells (FDC). 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p50 p50 NUM CD NumType=Card _ _ _ _ 5 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 7 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 follicular follicular ADJ JJ Degree=Pos _ _ _ _ 10 dendritic dendritic ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 FDC FDC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3635 # text = A constitutive NF-kappa B activity has been reported in mature macrophages. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 3 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 10 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 mature mature ADJ JJ Degree=Pos _ _ _ _ 13 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 3636 # text = This led to the hypothesis that some of the Rel/NF-kappa B proteins were key nuclear factors in functions of accessory cells of the immune response. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 some some DET DT _ _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 proteins protein NOUN NNS Number=Plur _ _ _ _ 17 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 key key ADJ JJ Degree=Pos _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 factors factor NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 functions function NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 accessory accessory ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 immune immune ADJ JJ Degree=Pos _ _ _ _ 29 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3637 # text = Therefore, we investigated in situ the nuclear localization of Rel/NF-kappa B proteins in accessory cells of the immune system by immunohistochemistry and double labeling by immunofluorescence from five normal human tonsils and five lymph nodes with follicular hyperplasia. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 situ situ PRON PRP Case=Acc|Person=2|PronType=Prs _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 localization localization NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 proteins protein NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 accessory accessory ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 immune immune ADJ JJ Degree=Pos _ _ _ _ 24 system system NOUN NN Number=Sing _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 immunohistochemistry immunohistochemistry ADJ JJ Degree=Pos _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 double double ADJ JJ Degree=Pos _ _ _ _ 29 labeling labele NOUN NN Number=Sing _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 immunofluorescence immunofluorescence NOUN NN Number=Sing _ _ _ _ 32 from from ADP IN _ _ _ _ _ 33 five five NUM CD NumType=Card _ _ _ _ 34 normal normal ADJ JJ Degree=Pos _ _ _ _ 35 human human ADJ JJ Degree=Pos _ _ _ _ 36 tonsils tonsil NOUN NNS Number=Plur _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 five five NUM CD NumType=Card _ _ _ _ 39 lymph lymph NOUN NN Number=Sing _ _ _ _ 40 nodes node NOUN NNS Number=Plur _ _ _ _ 41 with with ADP IN _ _ _ _ _ 42 follicular follicular ADJ JJ Degree=Pos _ _ _ _ 43 hyperplasia hyperplasia NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 3638 # text = Nuclear p65 and c-Rel proteins were found in all cell types including lymphocytes. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 p65 p65 NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 Rel Rel NOUN NN Number=Sing _ _ _ _ 7 proteins protein NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 all all DET DT _ _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 types type NOUN NNS Number=Plur _ _ _ _ 14 including include VERB VBG VerbForm=Ger _ _ _ _ 15 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 3639 # text = In germinal centers GC, p50, p52, and RelB were found in the nuclei of FDC only and were not detected in the nuclei of CD68+ cells. 1 In in ADP IN _ _ _ _ _ 2 germinal germinal ADJ JJ Degree=Pos _ _ _ _ 3 centers center NOUN NNS Number=Plur _ _ _ _ 4 GC GC NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 p52 p52 NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 RelB RelB PROPN NNP Number=Sing _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 FDC FDC PROPN NNP Number=Sing _ _ _ _ 19 only only ADV RB _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 CD68 CD68 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 + + SYM SYM _ _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3640 # text = In T cell areas, p50, p52, and RelB were found in the nuclei of HLA-DR+ cells with an antigen-presenting cell (APC) morphology. 1 In in ADP IN _ _ _ _ _ 2 T t PROPN NNP Number=Sing _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 areas area NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 p52 p52 NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 RelB RelB PROPN NNP Number=Sing _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 DR dr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 + + SYM SYM _ _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 antigen antigen ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 presenting present VERB VBG VerbForm=Ger _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 APC APC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 morphology morphology NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3641 # text = p52 and RelB were detected in the nuclei in both CD1a+ and CD68+ cells from the T cell area, whereas p50 was found only in CD68- and CD1a- cells. 1 p52 p52 NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 RelB Relb NOUN NN Number=Sing _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 both both DET DT _ _ _ _ _ 11 CD1a CD1a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 + + SYM SYM _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 CD68 CD68 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 + + SYM SYM _ _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 T T PROPN NNP Number=Sing _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 area area NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 whereas whereas SCONJ IN _ _ _ _ _ 24 p50 p50 NOUN NN Number=Sing _ _ _ _ 25 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 26 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 only only ADV RB _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 CD68 CD68 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 CD1a CD1a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 3642 # text = Cells with nuclear p50 were negative for the CD38, CD20 and CD2 markers. 1 Cells cell NOUN NNS Number=Plur _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 p50 p50 NOUN NN Number=Sing _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 negative negative ADJ JJ Degree=Pos _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 CD38 Cd38 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 CD20 CD20 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 CD2 CD2 NUM CD NumType=Card _ _ _ _ 14 markers marker NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3643 # text = These results show that, physiologically, high levels of nuclear of p50, p52 and RelB are restricted to accessory cells of the immune system, which include FDC in GC, and DC and macrophages in the T cell zone, that specialized scavenger macrophages from GC do not have detectable levels of p52 and RelB, whereas macrophages from the T cell area, known to present the antigen to T cells, do have both nuclear p52 and RelB, and that in the T cell zone, p52 and RelB are located in nuclei of both CD1a+, CD68+ or both, cells APC, whereas p50 is restricted to CD1a- and CD68- APC. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 physiologically physiologically ADV RB _ _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 high high ADJ JJ Degree=Pos _ _ _ _ 9 levels level NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 nuclear nuclear NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 p52 p52 NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 RelB Relb NOUN NN Number=Sing _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 restricted restrict VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 accessory accessory VERB VB VerbForm=Inf _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 immune immune ADJ JJ Degree=Pos _ _ _ _ 26 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 which which PRON WDT PronType=Rel _ _ _ _ 29 include include VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 FDC FDC PROPN NNP Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 GC GC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 DC DC PROPN NNP Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 T T PROPN NNP Number=Sing _ _ _ _ 41 cell cell NOUN NN Number=Sing _ _ _ _ 42 zone zone NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 that that PRON WDT PronType=Rel _ _ _ _ 45 specialized specialized VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 46 scavenger scavenger NOUN NN Number=Sing _ _ _ _ 47 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 48 from from ADP IN _ _ _ _ _ 49 GC GC PROPN NNPS Number=Plur _ _ _ _ 50 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 51 not not PART RB _ _ _ _ _ 52 have have VERB VB VerbForm=Inf _ _ _ _ 53 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 54 levels level NOUN NNS Number=Plur _ _ _ _ 55 of of ADP IN _ _ _ _ _ 56 p52 p52 NOUN NN Number=Sing _ _ _ _ 57 and and CCONJ CC _ _ _ _ _ 58 RelB Relb NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 , , PUNCT , _ _ _ _ _ 60 whereas whereas SCONJ IN _ _ _ _ _ 61 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 62 from from ADP IN _ _ _ _ _ 63 the the DET DT Definite=Def|PronType=Art _ _ _ _ 64 T T PROPN NNP Number=Sing _ _ _ _ 65 cell cell NOUN NN Number=Sing _ _ _ _ 66 area area NOUN NN Number=Sing _ _ _ SpaceAfter=No 67 , , PUNCT , _ _ _ _ _ 68 known known ADJ JJ Degree=Pos _ _ _ _ 69 to to PART TO _ _ _ _ _ 70 present present VERB VB VerbForm=Inf _ _ _ _ 71 the the DET DT Definite=Def|PronType=Art _ _ _ _ 72 antigen antigen NOUN NNS Number=Plur _ _ _ _ 73 to to PART TO _ _ _ _ _ 74 T t VERB VB VerbForm=Inf _ _ _ _ 75 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 76 , , PUNCT , _ _ _ _ _ 77 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 78 have have VERB VB VerbForm=Inf _ _ _ _ 79 both both DET DT _ _ _ _ _ 80 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 81 p52 p52 NOUN NN Number=Sing _ _ _ _ 82 and and CCONJ CC _ _ _ _ _ 83 RelB Relb NOUN NN Number=Sing _ _ _ SpaceAfter=No 84 , , PUNCT , _ _ _ _ _ 85 and and CCONJ CC _ _ _ _ _ 86 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 87 in in ADP IN _ _ _ _ _ 88 the the DET DT Definite=Def|PronType=Art _ _ _ _ 89 T T PROPN NNP Number=Sing _ _ _ _ 90 cell cell NOUN NN Number=Sing _ _ _ _ 91 zone zone NOUN NN Number=Sing _ _ _ SpaceAfter=No 92 , , PUNCT , _ _ _ _ _ 93 p52 p52 NOUN NN Number=Sing _ _ _ _ 94 and and CCONJ CC _ _ _ _ _ 95 RelB Relb NOUN NN Number=Sing _ _ _ _ 96 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 97 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 98 in in ADP IN _ _ _ _ _ 99 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 100 of of ADP IN _ _ _ _ _ 101 both both DET DT _ _ _ _ _ 102 CD1a CD1a NOUN NN Number=Sing _ _ _ SpaceAfter=No 103 + + SYM SYM _ _ _ _ SpaceAfter=No 104 , , PUNCT , _ _ _ _ _ 105 CD68 CD68 NUM CD NumType=Card _ _ _ SpaceAfter=No 106 + + SYM SYM _ _ _ _ _ 107 or or CCONJ CC _ _ _ _ _ 108 both both DET DT _ _ _ _ SpaceAfter=No 109 , , PUNCT , _ _ _ _ _ 110 cells cell NOUN NNS Number=Plur _ _ _ _ 111 APC Apc NOUN NN Number=Sing _ _ _ SpaceAfter=No 112 , , PUNCT , _ _ _ _ _ 113 whereas whereas SCONJ IN _ _ _ _ _ 114 p50 p50 NOUN NN Number=Sing _ _ _ _ 115 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 116 restricted restrict VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 117 to to ADP IN _ _ _ _ _ 118 CD1a CD1a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 119 - - PUNCT , _ _ _ _ _ 120 and and CCONJ CC _ _ _ _ _ 121 CD68 CD68 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 122 - - PUNCT HYPH _ _ _ _ _ 123 APC APC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 124 . . PUNCT . _ _ _ _ _ # sent_id = 3644 # text = The different patterns of p50, p52 and RelB protein nuclear localization may provide insight into their different roles during the immune response in vivo. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 different different ADJ JJ Degree=Pos _ _ _ _ 3 patterns pattern NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 p52 p52 NUM CD NumType=Card _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 RelB Relb PROPN NNP Number=Sing _ _ _ _ 10 protein protein VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 localization localization NOUN NN Number=Sing _ _ _ _ 13 may may AUX MD VerbForm=Fin _ _ _ _ 14 provide provide VERB VB VerbForm=Inf _ _ _ _ 15 insight insight ADV RB _ _ _ _ _ 16 into into ADP IN _ _ _ _ _ 17 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 different different ADJ JJ Degree=Pos _ _ _ _ 19 roles role NOUN NNS Number=Plur _ _ _ _ 20 during during ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 immune immune ADJ JJ Degree=Pos _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3645 # text = Document 003003523 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003523 003003523 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3646 # text = Glucocorticoid-mediated inhibition of interleukin-2 receptor alpha and -beta subunit expression by human T cells. 1 Glucocorticoid Glucocorticoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ _ 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 beta beta NOUN NN Number=Sing _ _ _ _ 14 subunit subunit NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3647 # text = To determine the mechanism of glucocorticoid (GC)-mediated inhibition of T cell functions, the effect of dexamethasone (DM) on T cell proliferation and interleukin-2 receptor (IL-2R) generation were studied. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 GC GC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 functions function NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 effect effect NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 DM DM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 T T PROPN NNP Number=Sing _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 2 2 NUM CD NumType=Card _ _ _ _ 33 receptor receptor NOUN NN Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 R r NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 generation generation NOUN NN Number=Sing _ _ _ _ 41 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 42 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 3648 # text = Dexamethasone inhibited IL-2-induced T cell proliferation by 30%-88%, relative to its concentration within the cultures. 1 Dexamethasone Dexamethasone PROPN NNP Number=Sing _ _ _ _ 2 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 30% 30% SYM NN Number=Sing _ _ _ SpaceAfter=No 13 - - SYM SYM _ _ _ _ SpaceAfter=No 14 88 88 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 relative relative ADV RB _ _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 concentration concentration NOUN NN Number=Sing _ _ _ _ 21 within within ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 cultures culture NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3649 # text = The effect of DM on expression of IL-2R alpha (Tac, p55, CD25) and beta (p75) genes in activated T cells was examined next. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 DM DM NOUN NN Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2R 2R PROPN NNP Number=Sing _ _ _ _ 11 alpha alpha PROPN NNP Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 Tac Tac PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 p55 p55 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 CD25 CD25 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 beta beta NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 p75 p75 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 genes gene NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 T t PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 next next ADV RB _ _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3650 # text = In T cells stimulated with purified phytohemagglutinin (PHA-p) and 4 beta-phorbol 12-myristate 13-acetate (PMA) addition of DM to the cultures resulted in a 60% reduction in IL-2R alpha and a 30% reduction in IL-2R beta membrane expression compared to T cells cultured in the absence of DM (p < 0.01). 1 In in ADP IN _ _ _ _ _ 2 T t PROPN NNP Number=Sing _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 phytohemagglutinin phytohemagglutinin NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 PHA PHa NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 p p NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 4 4 NUM CD NumType=Card _ _ _ _ 15 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 18 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 myristate myristate NOUN NN Number=Sing _ _ _ _ 21 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 acetate acetate NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 addition addition NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 DM Dm PROPN NNP Number=Sing _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 cultures culture NOUN NNS Number=Plur _ _ _ _ 33 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 60 60 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 % % SYM NN Number=Sing _ _ _ _ 38 reduction reduction NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 2R 2R PROPN NNP Number=Sing _ _ _ _ 43 alpha alpha PROPN NNP Number=Sing _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 46 30 30 NUM CD NumType=Card _ _ _ SpaceAfter=No 47 % % SYM NN Number=Sing _ _ _ _ 48 reduction reduction NOUN NN Number=Sing _ _ _ _ 49 in in ADP IN _ _ _ _ _ 50 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 2R 2R PROPN NNP Number=Sing _ _ _ _ 53 beta beta NOUN NN Number=Sing _ _ _ _ 54 membrane membrane NOUN NN Number=Sing _ _ _ _ 55 expression expression NOUN NN Number=Sing _ _ _ _ 56 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 57 to to ADP IN _ _ _ _ _ 58 T t PROPN NNP Number=Sing _ _ _ _ 59 cells cell NOUN NNS Number=Plur _ _ _ _ 60 cultured culture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 61 in in ADP IN _ _ _ _ _ 62 the the DET DT Definite=Def|PronType=Art _ _ _ _ 63 absence absence NOUN NN Number=Sing _ _ _ _ 64 of of ADP IN _ _ _ _ _ 65 DM DM PROPN NNP Number=Sing _ _ _ _ 66 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 67 p p NOUN NN Number=Sing _ _ _ _ 68 < < PUNCT -LRB- _ _ _ _ _ 69 0.01 0.01 NUM CD NumType=Card _ _ _ SpaceAfter=No 70 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 71 . . PUNCT . _ _ _ _ _ # sent_id = 3651 # text = Inhibition of membrane IL-2R alpha and IL-2R beta expression by 10(-6) 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 membrane membrane NOUN NN Number=Sing _ _ _ _ 4 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2R 2r PROPN NNP Number=Sing _ _ _ _ 7 alpha alpha PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2R 2r PROPN NNP Number=Sing _ _ _ _ 12 beta beta NOUN NN Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 (- (- PUNCT . _ _ _ _ SpaceAfter=No 17 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ # sent_id = 3652 # text = M DM was partially reversible by recombinant human IL-2 (rhIL-2). 1 M m NOUN NN Number=Sing _ _ _ _ 2 DM Dm PROPN NNP Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 partially partially ADV RB _ _ _ _ _ 5 reversible reversible ADJ JJ Degree=Pos _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 rhIL rhil NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3653 # text = By Northern blot analysis, DM caused a comparable decrease in IL-2R alpha and in IL-2R beta mRNA levels to membrane receptor expression in mitogen-stimulated T cells. 1 By by ADP IN _ _ _ _ _ 2 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 3 blot blot NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 DM DM PROPN NNP Number=Sing _ _ _ _ 7 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 comparable comparable ADJ JJ Degree=Pos _ _ _ _ 10 decrease decrease NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2R 2R PROPN NNP Number=Sing _ _ _ _ 15 alpha alpha PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2R 2R PROPN NNP Number=Sing _ _ _ _ 21 beta beta PROPN NNP Number=Sing _ _ _ _ 22 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 23 levels level NOUN NNS Number=Plur _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 membrane membrane VERB VB VerbForm=Inf _ _ _ _ 26 receptor receptor NOUN NN Number=Sing _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 T t PROPN NNP Number=Sing _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 3654 # text = By in vitro transcription assays, DM regulated IL-2R alpha gene expression at a transcriptional level while transcription of IL-2R beta gene was unaffected by DM. 1 By by ADP IN _ _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 vitro vitro NUM CD NumType=Card _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 DM Dm PROPN NNP Number=Sing _ _ _ _ 8 regulated regulate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 X LS _ _ _ _ SpaceAfter=No 12 R r X GW _ _ _ _ _ 13 alpha alpha X GW _ _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 at at ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 19 level level NOUN NN Number=Sing _ _ _ _ 20 while while SCONJ IN _ _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2R 2R PROPN NNP Number=Sing _ _ _ _ 26 beta beta NOUN NN Number=Sing _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 29 unaffected unaffected ADJ JJ Degree=Pos _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 DM DM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3655 # text = The mechanism of action of DM on IL-2R alpha transcription was examined by determining the mRNA levels of the p50 subunit of nuclear factor kappa B (NF-kappa B), a transcription factor that stimulates IL-2R alpha gene expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 action action NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 DM DM PROPN NNP Number=Sing _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2R 2R PROPN NNP Number=Sing _ _ _ _ 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by SCONJ IN _ _ _ _ _ 16 determining determine VERB VBG VerbForm=Ger _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 19 levels level NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 p50 p50 NOUN NN Number=Sing _ _ _ _ 23 subunit subunit NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ _ 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b PROPN NNP Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappa kappa PROPN NNP Number=Sing _ _ _ _ 33 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 transcription transcription NOUN NN Number=Sing _ _ _ _ 38 factor factor NOUN NN Number=Sing _ _ _ _ 39 that that PRON WDT PronType=Rel _ _ _ _ 40 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 41 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 2 2 X LS _ _ _ _ SpaceAfter=No 44 R r X GW _ _ _ _ _ 45 alpha alpha X FW Foreign=Yes _ _ _ _ 46 gene gene ADJ JJ Degree=Pos _ _ _ _ 47 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 3656 # text = The data indicate that 10(-6) M DM increased T cell p50 NF-kappa B mRNA levels by four-fold compared to the levels obtained in the absence of DM. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 (- (- PUNCT . _ _ _ _ SpaceAfter=No 7 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 M m NOUN NN Number=Sing _ _ _ _ 10 DM Dm NOUN NN Number=Sing _ _ _ _ 11 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 p50 p50 NUM CD NumType=Card _ _ _ _ 15 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B b PROPN NNP Number=Sing _ _ _ _ 19 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 20 levels level NOUN NNS Number=Plur _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 four four NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 fold fold NOUN NN Number=Sing _ _ _ _ 25 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 levels level NOUN NNS Number=Plur _ _ _ _ 29 obtained obtaine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 absence absence NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 DM DM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 3657 # text = Further, the level of nuclear proteins capable of binding to the NF-kappa B sites in activated T cells increased in response to DM. 1 Further further ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 level level NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 proteins protein NOUN NNS Number=Plur _ _ _ _ 8 capable capable ADJ JJ Degree=Pos _ _ _ _ 9 of of SCONJ IN _ _ _ _ _ 10 binding bind VERB VBG VerbForm=Ger _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 sites site NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 response response NOUN NN Number=Sing _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 DM DM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3658 # text = In sum, DM regulates T cell membrane expression of IL-2R by more than one molecular mechanism. 1 In in ADP IN _ _ _ _ _ 2 sum sum NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 DM DM PROPN NNP Number=Sing _ _ _ _ 5 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 T t NUM CD NumType=Card _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 membrane membrane NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2R 2R PROPN NNP Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 more more ADJ JJR Degree=Cmp _ _ _ _ 16 than than ADP IN _ _ _ _ _ 17 one one NUM CD NumType=Card _ _ _ _ 18 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 19 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3659 # text = Document 003003528 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003528 003003528 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3660 # text = Glucocorticoid receptor in patients with lupus nephritis: relationship between receptor levels in mononuclear leukocytes and effect of glucocorticoid therapy. 1 Glucocorticoid Glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 patients patient NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 lupus lupus NOUN NN Number=Sing _ _ _ _ 7 nephritis nephritis NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 : : PUNCT : _ _ _ _ _ 9 relationship relationship NOUN NN Number=Sing _ _ _ _ 10 between between ADP IN _ _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 levels level NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 15 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 effect effect NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 20 therapy therapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3661 # text = We investigated the clinical significance of glucocorticoid receptor determination in 20 patients with systemic lupus erythematosus (SLE) who afterwards developed nephrotic syndrome. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 5 significance significance NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 determination determination NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 20 20 NUM CD NumType=Card _ _ _ _ 12 patients patient NOUN NNS Number=Plur _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 systemic systemic ADJ JJ Degree=Pos _ _ _ _ 15 lupus lupus NOUN NN Number=Sing _ _ _ _ 16 erythematosus erythematosus NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 SLE SLE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 who who PRON WP PronType=Rel _ _ _ _ 21 afterwards afterwards ADV RB _ _ _ _ _ 22 developed develop VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 nephrotic nephrotic ADJ JJ Degree=Pos _ _ _ _ 24 syndrome syndrome NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3662 # text = Glucocorticoid receptor concentrations in mononuclear leukocytes (MNL) in these patients were comparable with those in both other patients with SLE and healthy persons. 1 Glucocorticoid Glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ _ 3 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 6 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 MNL MNL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 12 patients patient NOUN NNS Number=Plur _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 comparable comparable ADJ JJ Degree=Pos _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 both both DET DT _ _ _ _ _ 19 other other ADJ JJ Degree=Pos _ _ _ _ 20 patients patient NOUN NNS Number=Plur _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 SLE Sle NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 25 persons person NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3663 # text = Improvement in urinary protein excretion and in disease activity, which was scored according to the SLE Disease Activity Index system of the University of Toronto, closely related to the glucocorticoid receptor concentrations in MNL isolated from the corresponding patients. 1 Improvement improvement NOUN NN Number=Sing _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 urinary urinary ADJ JJ Degree=Pos _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 excretion excretion NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 disease disease NOUN NN Number=Sing _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 scored score VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 according accord VERB VBG VerbForm=Ger _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 SLE SLE PROPN NNP Number=Sing _ _ _ _ 18 Disease disease NOUN NN Number=Sing _ _ _ _ 19 Activity activity NOUN NN Number=Sing _ _ _ _ 20 Index index NOUN NN Number=Sing _ _ _ _ 21 system system NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 University University PROPN NNP Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 Toronto Toronto PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 closely closely ADV RB _ _ _ _ _ 29 related related ADJ JJ Degree=Pos _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 33 receptor receptor NOUN NN Number=Sing _ _ _ _ 34 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 MNL MNL PROPN NNP Number=Sing _ _ _ _ 37 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 from from ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 corresponding corresponding NOUN NN Number=Sing _ _ _ _ 41 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3664 # text = In summary, glucocorticoid receptor determination in patients with lupus nephritis may be a predictive clue for assessing responsiveness to glucocorticoid therapy. 1 In in ADP IN _ _ _ _ _ 2 summary summary NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ _ 6 determination determination NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 patients patient NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 lupus lupus NOUN NN Number=Sing _ _ _ _ 11 nephritis nephritis NOUN NN Number=Sing _ _ _ _ 12 may may AUX MD VerbForm=Fin _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 predictive predictive ADJ JJ Degree=Pos _ _ _ _ 16 clue clue NOUN NN Number=Sing _ _ _ _ 17 for for SCONJ IN _ _ _ _ _ 18 assessing assess VERB VBG VerbForm=Ger _ _ _ _ 19 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 glucocorticoid glucocorticoid VERB VB VerbForm=Inf _ _ _ _ 22 therapy therapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3665 # text = Document 003003533 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003533 003003533 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3666 # text = rel 1 rel rel NOUN NN Number=Sing _ _ _ _ # sent_id = 3667 # text = Is rapidly tyrosine-phosphorylated following granulocyte-colony stimulating factor treatment of human neutrophils. 1 Is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 2 rapidly rapidly ADV RB _ _ _ _ _ 3 tyrosine tyrosine ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 following follow VERB VBG VerbForm=Ger _ _ _ _ 7 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 colony colony NOUN NN Number=Sing _ _ _ _ 10 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 treatment treatment NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3668 # text = Stimulation of neutrophils with granulocyte-colony stimulating factor (G-CSF) results in an enhanced respiratory burst, prolonged survival, and increased tumor cell killing. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 colony colony NOUN NN Number=Sing _ _ _ _ 8 stimulating stimulating NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 G- G- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 CSF Csf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 results result NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 respiratory respiratory NOUN NN Number=Sing _ _ _ _ 19 burst burst NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 prolonged prolonge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 survival survival NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 tumor tumor NOUN NN Number=Sing _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 killing killing VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3669 # text = The effects of G-CSF are mediated by binding to specific, high affinity receptors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 G- g- NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 CSF Csf NOUN NN Number=Sing _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by SCONJ IN _ _ _ _ _ 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 high high ADJ JJ Degree=Pos _ _ _ _ 14 affinity affinity NOUN NN Number=Sing _ _ _ _ 15 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 3670 # text = G-CSF receptors lack intrinsic tyrosine kinase activity, but activation of the receptor results in the rapid induction of tyrosine kinase activity. 1 G- G- SYM NFP _ _ _ _ SpaceAfter=No 2 CSF CSF PROPN NNP Number=Sing _ _ _ _ 3 receptors receptor NOUN NNS Number=Plur _ _ _ _ 4 lack lack VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 intrinsic intrinsic ADJ JJ Degree=Pos _ _ _ _ 6 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 but but CCONJ CC _ _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 results result NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 19 induction induction NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 22 kinase kinase NOUN NN Number=Sing _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3671 # text = Antiphosphotyrosine immunoblots of whole cell lysates prepared from neutrophils show that the G-CSF rapidly induces prominent tyrosine phosphorylation of a protein of a relative molecular mass of 80 kDa. 1 Antiphosphotyrosine Antiphosphotyrosine ADJ JJ Degree=Pos _ _ _ _ 2 immunoblots immunoblot NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 whole whole ADJ JJ Degree=Pos _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 lysates lysate NOUN NNS Number=Plur _ _ _ _ 7 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 10 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 G- g- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 CSF CSF PROPN NNP Number=Sing _ _ _ _ 15 rapidly rapidly ADV RB _ _ _ _ _ 16 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 prominent prominent ADJ JJ Degree=Pos _ _ _ _ 18 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 19 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 relative relative ADV RB _ _ _ _ _ 26 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 27 mass mass NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 80 80 NUM CD NumType=Card _ _ _ _ 30 kDa kDa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3672 # text = Using monospecific antibodies, the 80-kDa tyrosine-phosphorylated protein has been shown to be p80c-rel, a proto-oncogene belonging to a family of transcriptional regulators which include NF-kB. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 monospecific monospecific ADJ JJ Degree=Pos _ _ _ _ 3 antibodies antibody NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 80 80 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kDa kDa NOUN NN Number=Sing _ _ _ _ 9 tyrosine tyrosine NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 15 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 p80c p80c NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 rel rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 -oncogene -oncogene NOUN NN Number=Sing _ _ _ _ 25 belonging belong VERB VBG VerbForm=Ger _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 family family NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 31 regulators regulator NOUN NNS Number=Plur _ _ _ _ 32 which which PRON WDT PronType=Rel _ _ _ _ 33 include include VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 kB kb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3673 # text = The induction of tyrosine phosphorylation of p80c-rel was unique to G-CSF in that granulocyte-macrophage colony stimulating factor which also stimulates neutrophils and induces tyrosine phosphorylation does not result in tyrosine phosphorylation of p80c-rel. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 5 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 p80c p80c NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 rel rel NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 unique unique ADJ JJ Degree=Pos _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 G- G- PUNCT : _ _ _ _ SpaceAfter=No 14 CSF CSF PROPN NNP Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 17 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 20 colony colony NOUN NN Number=Sing _ _ _ _ 21 stimulating stimulate VERB VBG VerbForm=Ger _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 also also ADV RB _ _ _ _ _ 25 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 induces induce NOUN NNS Number=Plur _ _ _ _ 29 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 30 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 31 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 not not PART RB _ _ _ _ _ 33 result result VERB VB VerbForm=Inf _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 36 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 p80c p80c NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 rel rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 3674 # text = The consequences of p80c-rel tyrosine phosphorylation are not yet known; however, tyrosine-phosphorylated p80c-rel is capable of binding to DNA, and G-CSF stimulation results in an increase in the amount of p80c-rel which binds to DNA. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 consequences consequence NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p80c p80c NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 rel rel NOUN NN Number=Sing _ _ _ _ 7 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 8 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 yet yet ADV RB _ _ _ _ _ 12 known known VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 13 ; ; PUNCT , _ _ _ _ _ 14 however however ADV RB _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 tyrosine tyrosine NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 p80c p80c NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 rel rel NOUN NN Number=Sing _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 capable capable ADJ JJ Degree=Pos _ _ _ _ 24 of of SCONJ IN _ _ _ _ _ 25 binding bind VERB VBG VerbForm=Ger _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 DNA Dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 G- G- NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 CSF Csf NOUN NN Number=Sing _ _ _ _ 32 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 33 results result NOUN NNS Number=Plur _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 increase increase NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 amount amount NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 p80c p80c NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 rel rel NOUN NN Number=Sing _ _ _ _ 44 which which PRON WDT PronType=Rel _ _ _ _ 45 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 46 to to ADP IN _ _ _ _ _ 47 DNA Dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 3675 # text = These results demonstrate that one of the first biochemical events which occurs in neutrophils following G-CSF stimulation, activation of a tyrosine kinase, leads directly to the tyrosine phosphorylation of p80c-rel. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 one one NUM CD NumType=Card _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 9 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 10 events event NOUN NNS Number=Plur _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 occurs occur VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 15 following follow VERB VBG VerbForm=Ger _ _ _ _ 16 G- G- PUNCT , _ _ _ _ SpaceAfter=No 17 CSF CSF PROPN NNP Number=Sing _ _ _ _ 18 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 24 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 directly directly ADV RB _ _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 31 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 p80c p80c NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 rel rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 3676 # text = Thus, the tyrosine kinase activated by G-CSF appears to directly transduce a signal to a protein which functions as a transcriptional regulator. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 tyrosine tyrosine ADJ JJ Degree=Pos _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ _ 6 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 G G PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 CSF CSF PROPN NNP Number=Sing _ _ _ _ 11 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 directly directly ADV RB _ _ _ _ _ 14 transduce transduce VERB VB VerbForm=Inf _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 signal signal NOUN NN Number=Sing _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 which which PRON WDT PronType=Rel _ _ _ _ 21 functions function VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 as as ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 25 regulator regulator NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3677 # text = Document 003003538 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003538 003003538 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3678 # text = Activation of STAT5 by IL-4 relies on Janus kinase function but not on receptor tyrosine phosphorylation, and can contribute to both cell proliferation and gene regulation. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 STAT5 STAT5 PROPN NNP Number=Sing _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 4 4 NUM CD NumType=Card _ _ _ _ 8 relies rely NOUN NNS Number=Plur _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 Janus Janus PROPN NNP Number=Sing _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 function function NOUN NN Number=Sing _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ _ 17 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 18 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 can can AUX MD VerbForm=Fin _ _ _ _ 22 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 both both DET DT _ _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3679 # text = We have investigated mechanisms and consequences of STAT5 activation through the human IL-4 receptor (IL-4R). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 consequences consequences NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 STAT5 stat5 NUM CD NumType=Card _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 through through ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 4 4 NUM CD NumType=Card _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 4R 4r PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3680 # text = By functionally expressing receptor mutants in the murine pro-B cell line Ba/F3, we could show that phosphorylated tyrosine residues within the IL-4R alpha chain are dispensable for IL-4-induced STAT5 activity. 1 By by ADP IN _ _ _ _ _ 2 functionally functionally ADV RB _ _ _ _ _ 3 expressing express ADJ JJ Degree=Pos _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ _ 5 mutants mutant NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 murine murine NOUN NN Number=Sing _ _ _ _ 9 pro-B pro-b NOUN NN Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 line line NOUN NN Number=Sing _ _ _ _ 12 Ba/F3 Ba/F3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 15 could could AUX MD VerbForm=Fin _ _ _ _ 16 show show VERB VB VerbForm=Inf _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 20 residues residue NOUN NNS Number=Plur _ _ _ _ 21 within within ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 4R 4r PROPN NNP Number=Sing _ _ _ _ 26 alpha alpha NOUN NN Number=Sing _ _ _ _ 27 chain chain NOUN NN Number=Sing _ _ _ _ 28 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 dispensable dispensable ADJ JJ Degree=Pos _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 STAT5 stat5 NUM CD NumType=Card _ _ _ _ 37 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 3681 # text = However, disruption of a membrane-proximal proline-rich sequence motif ('box1') in either subunit of the bipartite IL-4R abolished not only ligand-induced tyrosine phosphorylation of Janus kinases JAK1 and JAK3, but also IL-4-triggered activation of STAT5 and concomitant cell proliferation. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 disruption disruption NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 membrane membrane NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 9 proline proline NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 rich rich ADJ JJ Degree=Pos _ _ _ _ 12 sequence sequence NOUN NN Number=Sing _ _ _ _ 13 motif motif NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 16 box1 box1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 either either DET DT _ _ _ _ _ 21 subunit subunit NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 bipartite bipartite ADJ JJ Degree=Pos _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 4R 4R PROPN NNP Number=Sing _ _ _ _ 28 abolished abolish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 not not ADV RB _ _ _ _ _ 30 only only ADV RB _ _ _ _ _ 31 ligand ligand NUM CD NumType=Card _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 35 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 Janus Janus PROPN NNP Number=Sing _ _ _ _ 38 kinases kinase NOUN NNS Number=Plur _ _ _ _ 39 JAK1 JAK1 NUM CD NumType=Card _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 JAK3 JAK3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 but but CCONJ CC _ _ _ _ _ 44 also also ADV RB _ _ _ _ _ 45 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 triggered trigger VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 activation activation NOUN NN Number=Sing _ _ _ _ 51 of of ADP IN _ _ _ _ _ 52 STAT5 stat5 PROPN NNP Number=Sing _ _ _ _ 53 and and CCONJ CC _ _ _ _ _ 54 concomitant concomitant ADJ JJ Degree=Pos _ _ _ _ 55 cell cell NOUN NN Number=Sing _ _ _ _ 56 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 3682 # text = A dominant-negative version of STAT5b, but not of STAT5a, interfered with IL-4-induced DNA synthesis in Ba/F3 cells, suggesting an involvement of STAT5b in the control of cell proliferation through IL-4R. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 dominant dominant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 negative negative ADJ JJ Degree=Pos _ _ _ _ 5 version version NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 STAT5 STAT5 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 b b NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 but but CCONJ CC _ _ _ _ _ 11 not not ADV RB _ _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 STAT5a STAT5a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 interfered interfer VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 DNA dna NOUN NN Number=Sing _ _ _ _ 23 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 Ba/F3 Ba/F3 NUM CD NumType=Card _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 29 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 involvement involvement NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 STAT5 STAT5 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 b b NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 control control NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 40 through through ADP IN _ _ _ _ _ 41 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 4R 4R PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 3683 # text = Reporter gene experiments finally showed that transcription from promoters of STAT5 target genes can be specifically induced by challenging cells with IL-4, and that both STAT5a and STAT5b can contribute to IL-4-triggered transcriptional control. 1 Reporter reporter NOUN NN Number=Sing _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ _ 4 finally finally ADV RB _ _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 promoters promoter NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 STAT5 STAT5 NUM CD NumType=Card _ _ _ _ 12 target target NOUN NN Number=Sing _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 can can AUX MD VerbForm=Fin _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 specifically specifically ADV RB _ _ _ _ _ 17 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 challenging challenging ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 that that SCONJ IN _ _ _ _ _ 28 both both DET DT _ _ _ _ _ 29 STAT5 STAT5 NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 a a NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 STAT5 stat5 NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 b b NOUN NN Number=Sing _ _ _ _ 34 can can AUX MD VerbForm=Fin _ _ _ _ 35 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 triggered trigger VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 43 control control NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3684 # text = Document 003003539 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003539 003003539 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3685 # text = HTLV-1 Tax induces expression of various immediate early serum responsive genes. 1 HTLV HTLV NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 Tax tax NOUN NN Number=Sing _ _ _ _ 5 induces induce NOUN NNS Number=Plur _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 various various ADJ JJ Degree=Pos _ _ _ _ 9 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 10 early early ADJ JJ Degree=Pos _ _ _ _ 11 serum serum NOUN NN Number=Sing _ _ _ _ 12 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3686 # text = Human T-cell leukemia virus type 1 (HTLV-1) is an etiological agent of adult T-cell leukemia (ATL). 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 type type NOUN NN Number=Sing _ _ _ _ 7 1 1 NUM CD NumType=Card _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 HTLV HTLV NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 X LS _ _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 etiological etiological ADJ JJ Degree=Pos _ _ _ _ 16 agent agent NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 adult adult NOUN NN Number=Sing _ _ _ _ 19 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 ATL ATL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3687 # text = We showed here by mobility-shift assay that T-cell lines transformed with the virus contained high levels of AP-1 activities. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 mobility mobility NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 shift shift NOUN NN Number=Sing _ _ _ _ 8 assay assay NOUN NN Number=Sing _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 T- T- SYM NFP _ _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 lines line NOUN NNS Number=Plur _ _ _ _ 13 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ _ 17 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 high high ADJ JJ Degree=Pos _ _ _ _ 19 levels level NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 activities activity NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3688 # text = Consistent with this result, these cell lines expressed increased levels of mRNAs encoding the AP-1 proteins, c-Fos, Fra-1, c-Jun, JunB, and JunD. 1 Consistent consistent ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 result result NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 lines line NOUN NNS Number=Plur _ _ _ _ 9 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 mRNAs mRNA SCONJ IN _ _ _ _ _ 14 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 c- c- SYM NFP _ _ _ _ SpaceAfter=No 22 Fos Fos PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 Fra Fra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 c c NOUN NN Abbr=Yes|Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 JunB JunB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 JunD JunD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 3689 # text = Previously, transcription of the c-fos gene has been reported to be transactivated by the viral transcription factor, Tax1. 1 Previously previously ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 fos fo NOUN NNS Number=Plur _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 12 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 transactivated transactivate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 viral viral ADJ JJ Degree=Pos _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 Tax1 Tax1 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3690 # text = By using the human T-cell line (JPX-9), in which expression of the Tax1 is inducible, we showed that expression of mRNAs for Fra-1, c-Jun, and JunD was also transactivated by Tax1. 1 By by SCONJ IN _ _ _ _ _ 2 using use VERB VBG VerbForm=Ger _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 line line NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 JPX JPX NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - SYM SYM _ _ _ _ SpaceAfter=No 11 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 which which DET WDT PronType=Int _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 Tax1 tax1 NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 inducible inducible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 24 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 mRNAs mRNAs NOUN NNS Number=Plur _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 Fra Fra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 c c NOUN NN Abbr=Yes|Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 JunD JunD PROPN NNP Number=Sing _ _ _ _ 39 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 40 also also ADV RB _ _ _ _ _ 41 transactivated transactivate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 42 by by ADP IN _ _ _ _ _ 43 Tax1 Tax1 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 3691 # text = Moreover, Tax1 activated expression of two other transcription factors having zinc finger motifs, Egr-1 and Egr-2, in the same cells. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Tax1 Tax1 PROPN NNP Number=Sing _ _ _ _ 4 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 other other ADJ JJ Degree=Pos _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ _ 11 having have VERB VBG VerbForm=Ger _ _ _ _ 12 zinc zinc NOUN NN Number=Sing _ _ _ _ 13 finger finger NOUN NN Number=Sing _ _ _ _ 14 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 -2 -2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 same same ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3692 # text = The Tax1-inducible transcription factors identified here are encoded by the members of immediate early genes under the control of growth signals. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Tax1 tax1 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factors factor NOUN NNS Number=Plur _ _ _ _ 7 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 here here ADV RB PronType=Dem _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 encoded encod VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 members member NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 16 early early ADJ JJ Degree=Pos _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 under under ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 control control NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 growth growth NOUN NN Number=Sing _ _ _ _ 23 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3693 # text = Thus, Tax1 was suggested to replace growth signals, at least in part, by this mechanism. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Tax1 Tax1 PROPN NNP Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 suggested suggest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 replace replace VERB VB VerbForm=Inf _ _ _ _ 8 growth growth NOUN NN Number=Sing _ _ _ _ 9 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 at at ADV RB _ _ _ _ _ 12 least least ADV RBS Degree=Sup _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 part part ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 18 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3694 # text = Document 003003541 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003541 003003541 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3695 # text = Monoallelic expression of Pax5: a paradigm for the haploinsufficiency of mammalian Pax genes? 1 Monoallelic Monoallelic ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Pax5 Pax5 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 : : PUNCT : _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 paradigm paradigm NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 haploinsufficiency haploinsufficiency NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 13 Pax Pax NOUN NN Number=Sing _ _ _ _ 14 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 ? ? PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3696 # text = It is generally assumed that most mammalian genes are transcribed from both alleles. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 generally generally ADV RB _ _ _ _ _ 4 assumed assume VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 most most ADJ JJS Degree=Sup _ _ _ _ 7 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 8 genes gene NOUN NNS Number=Plur _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 both both DET DT _ _ _ _ _ 13 alleles allele NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 3697 # text = Hence, the diploid state of the genome offers the advantage that a loss-of-function mutation in one allele can be compensated for by the remaining wild-type allele of the same gene. 1 Hence hence ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 diploid diploid ADJ JJ Degree=Pos _ _ _ _ 5 state state NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 genome genome NOUN NN Number=Sing _ _ _ _ 9 offers offer VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 advantage advantage NOUN NN Number=Sing _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 loss loss NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 of of ADP IN _ _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 function function NOUN NN Number=Sing _ _ _ _ 19 mutation mutation NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 one one NUM CD NumType=Card _ _ _ _ 22 allele allele NOUN NN Number=Sing _ _ _ _ 23 can can AUX MD VerbForm=Fin _ _ _ _ 24 be be AUX VB VerbForm=Inf _ _ _ _ 25 compensated compensate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 remaining remain VERB VBG VerbForm=Ger _ _ _ _ 30 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 type type NOUN NN Number=Sing _ _ _ _ 33 allele allele NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 same same ADJ JJ Degree=Pos _ _ _ _ 37 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 3698 # text = Indeed, the vast majority of human disease syndromes and engineered mutations in the mouse genome are recessive, indicating that recessiveness is the 'default' state. 1 Indeed indeed ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 vast vast ADJ JJ Degree=Pos _ _ _ _ 5 majority majority NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 disease disease NOUN NN Number=Sing _ _ _ _ 9 syndromes syndrome NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 engineered engineer VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 mutations mutation NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 mouse mouse NOUN NN Number=Sing _ _ _ _ 16 genome genome NOUN NN Number=Sing _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 recessive recessive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 recessiveness recessiveness NOUN NN Number=Sing _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 26 default default NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ' ' PUNCT '' _ _ _ _ _ 28 state state NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3699 # text = However, a minority of genes are semi-dominant, as heterozygous loss-of-function mutation in these genes leads to phenotypic abnormalities. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 minority minority NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 genes gene NOUN NNS Number=Plur _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 semi-dominant semi-dominant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 as as SCONJ IN _ _ _ _ _ 11 heterozygous heterozygous ADJ JJ Degree=Pos _ _ _ _ 12 loss lose NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 of of ADP IN _ _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 function function NOUN NN Number=Sing _ _ _ _ 17 mutation mutation NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ _ 21 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 phenotypic phenotypic ADJ JJ Degree=Pos _ _ _ _ 24 abnormalities abnormality NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3700 # text = This condition, known as haploinsufficiency, has been described for five of the nine mammalian Pax genes, which are associated with mouse developmental mutants and human disease syndromes. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 condition condition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 haploinsufficiency haploinsufficiency NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 10 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 five five NUM CD NumType=Card _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 nine nine NUM CD NumType=Card _ _ _ _ 16 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 17 Pax Pax NOUN NN Number=Sing _ _ _ _ 18 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 which which PRON WDT PronType=Rel _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 mouse mouse NOUN NN Number=Sing _ _ _ _ 25 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 26 mutants mutant NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 disease disease NOUN NN Number=Sing _ _ _ _ 30 syndromes syndrome NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3701 # text = Recently we have reported that the Pax5 gene is subject to allele-specific regulation during B cell development. 1 Recently recently ADV RB _ _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 reported report VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 Pax5 pax5 NOUN NN Number=Sing _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 subject subject ADJ JJ Degree=Pos _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 allele allele ADV RB _ _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 specific specific ADJ JJ Degree=Pos _ _ _ _ 15 regulation regulation NOUN NN Number=Sing _ _ _ _ 16 during during ADP IN _ _ _ _ _ 17 B b ADJ JJ Degree=Pos _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3702 # text = Pax5 is predominantly transcribed from only one of its two alleles in early B-lymphoid progenitors and mature B cells, while it transiently switches to a biallelic mode of transcription in pre-B and immature B cells. 1 Pax5 pax5 NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 predominantly predominantly ADV RB _ _ _ _ _ 4 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 only only ADV RB _ _ _ _ _ 7 one one NUM CD NumType=Card _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 10 two two NUM CD NumType=Card _ _ _ _ 11 alleles allele NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 early early ADJ JJ Degree=Pos _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 lymphoid lymphoid NOUN NN Number=Sing _ _ _ _ 17 progenitors progenitor NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 mature mature ADJ JJ Degree=Pos _ _ _ _ 20 B b ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 while while SCONJ IN _ _ _ _ _ 24 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 25 transiently transiently ADV RB _ _ _ _ _ 26 switches switch VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 biallelic biallelic ADJ JJ Degree=Pos _ _ _ _ 30 mode mode NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 transcription transcription NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 pre pre X AFX _ _ _ _ SpaceAfter=No 35 -B -b ADJ JJ Degree=Pos _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 immature immature ADJ JJ Degree=Pos _ _ _ _ 38 B b ADJ JJ Degree=Pos _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 3703 # text = As a consequence, B-lymphoid tissues are mosaic with regard to the transcribed allele, and heterozygous mutation of Pax5 therefore results in deletion of B lymphocytes expressing only the mutant allele. 1 As as ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 consequence consequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 lymphoid lymphoid NOUN NN Number=Sing _ _ _ _ 8 tissues tissue NOUN NNS Number=Plur _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 mosaic mosaic ADJ JJ Degree=Pos _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 regard regard NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 allele allele NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 heterozygous heterozygous ADJ JJ Degree=Pos _ _ _ _ 20 mutation mutation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 Pax5 pax5 PROPN NNP Number=Sing _ _ _ _ 23 therefore therefore ADV RB _ _ _ _ _ 24 results result NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 deletion deletion NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 B b ADJ JJ Degree=Pos _ _ _ _ 29 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 30 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 31 only only ADV RB _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 34 allele allele NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 3704 # text = The allele-specific regulation of Pax5 raises the intriguing possibility that monoallelic expression may also be the mechanism causing the haploinsufficiency of other Pax genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 allele allele NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 regulation regulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Pax5 Pax5 NUM CD NumType=Card _ _ _ _ 8 raises rais NOUN NNS Number=Plur _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 intriguing intrigue VERB VBG VerbForm=Ger _ _ _ _ 11 possibility possibility NOUN NN Number=Sing _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 monoallelic monoallelic ADJ JJ Degree=Pos _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 may may AUX MD VerbForm=Fin _ _ _ _ 16 also also ADV RB _ _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 20 causing cause VERB VBG VerbForm=Ger _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 haploinsufficiency haploinsufficiency NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 other other ADJ JJ Degree=Pos _ _ _ _ 25 Pax Pax NOUN NN Number=Sing _ _ _ _ 26 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3705 # text = In this review, we discuss different models accounting for the haploinsufficiency of mammalian Pax genes, provide further evidence in support of the allele-specific regulation of Pax5 and discuss the implication of these findings in the context of the recent literature describing the stochastic and monoallelic activation of other hematopoietic genes. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 review review NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 discuss discuss VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 different different ADJ JJ Degree=Pos _ _ _ _ 8 models model NOUN NNS Number=Plur _ _ _ _ 9 accounting accounte NOUN NN Number=Sing _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 haploinsufficiency haploinsufficiency NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 15 Pax Pax NOUN NN Number=Sing _ _ _ _ 16 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 further further ADJ JJ Degree=Pos _ _ _ _ 20 evidence evidence NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 support support NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 allele allele NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 specific specific ADJ JJ Degree=Pos _ _ _ _ 28 regulation regulation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 Pax5 Pax5 NUM CD NumType=Card _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 discuss discuss VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 implication implication NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 37 findings finding NOUN NNS Number=Plur _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 context context NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 recent recent ADJ JJ Degree=Pos _ _ _ _ 44 literature literature NOUN NN Number=Sing _ _ _ _ 45 describing describe VERB VBG VerbForm=Ger _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 stochastic stochastic ADJ JJ Degree=Pos _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 monoallelic monoallelic ADJ JJ Degree=Pos _ _ _ _ 50 activation activation NOUN NN Number=Sing _ _ _ _ 51 of of ADP IN _ _ _ _ _ 52 other other ADJ JJ Degree=Pos _ _ _ _ 53 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 54 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3706 # text = Document 003003546 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003546 003003546 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3707 # text = [The effect of 24,25-dihydroxyvitamin D3 (dioxyvit) on Ca metabolism and immune status during chronic kidney failure] 1 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 The the DET DT Definite=Def|PronType=Art _ _ _ _ 3 effect effect NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 24,25 24,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT : _ _ _ _ SpaceAfter=No 7 dihydroxyvitamin dihydroxyvitamin NOUN NN Number=Sing _ _ _ _ 8 D3 D3 NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 dioxyvit dioxyvit NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 Ca ca NOUN NN Number=Sing _ _ _ _ 14 metabolism metabolism NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 immune immune ADJ JJ Degree=Pos _ _ _ _ 17 status status NOUN NN Number=Sing _ _ _ _ 18 during during ADP IN _ _ _ _ _ 19 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 20 kidney kidney NOUN NN Number=Sing _ _ _ _ 21 failure failure NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 3708 # text = Active metabolite of vitamin D3, 24R,25 (OH)2D3 (dioxyvit) was used at a daily dose of 100 micrograms in treatment of children affected with tubulointerstitial disease of kidney and with chronic glomerulonephritis under conditions of kidney insufficiency. 1 Active active ADJ JJ Degree=Pos _ _ _ _ 2 metabolite metabolite NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 vitamin vitamin ADJ JJ Degree=Pos _ _ _ _ 5 D3 D3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 24R,25 24R,25 NUM CD NumType=Card _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 2D3 2D3 NUM CD NumType=Card _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 dioxyvit dioxyvit NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 at at ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 daily daily ADJ JJ Degree=Pos _ _ _ _ 20 dose dose NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 100 100 NUM CD NumType=Card _ _ _ _ 23 micrograms microgram NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 treatment treatment NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 children child NOUN NNS Number=Plur _ _ _ _ 28 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 tubulointerstitial tubulointerstitial ADJ JJ Degree=Pos _ _ _ _ 31 disease disease NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 kidney kidney NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 37 glomerulonephritis glomerulonephritis NOUN NN Number=Sing _ _ _ _ 38 under under ADP IN _ _ _ _ _ 39 conditions condition NOUN NNS Number=Plur _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 kidney kidney NOUN NN Number=Sing _ _ _ _ 42 insufficiency insufficiency NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 3709 # text = The drug exhibited distinct normalizing effect on patterns of calcium metabolism: increase of total and ionized Ca2+ and of 25-OHD, decrease in concentration of parath hormone and osteocalcine in blood serum as well as on immunological parameters: restoration of decreased content of T- and 0-lymphocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 drug drug NOUN NN Number=Sing _ _ _ _ 3 exhibited exhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 5 normalizing normalizing NOUN NN Number=Sing _ _ _ _ 6 effect effect NOUN NN Number=Sing _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 patterns pattern NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 calcium calcium NOUN NN Number=Sing _ _ _ _ 11 metabolism metabolism NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 : : PUNCT : _ _ _ _ _ 13 increase increase NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 total total ADJ JJ Degree=Pos _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 ionized ionize ADJ JJ Degree=Pos _ _ _ _ 18 Ca2 Ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 + + SYM SYM _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 25 25 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 OHD Ohd NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 decrease decrease NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 concentration concentration NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 parath parath NOUN NN Number=Sing _ _ _ _ 31 hormone hormone NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 osteocalcine osteocalcine NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 blood blood NOUN NN Number=Sing _ _ _ _ 36 serum serum NOUN NN Number=Sing _ _ _ _ 37 as as ADV RB _ _ _ _ _ 38 well well ADV RB Degree=Pos _ _ _ _ 39 as as ADP IN _ _ _ _ _ 40 on on ADP IN _ _ _ _ _ 41 immunological immunological ADJ JJ Degree=Pos _ _ _ _ 42 parameters parameter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 : : PUNCT : _ _ _ _ _ 44 restoration restoration NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 content content NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 T t PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT , _ _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 0 0 NUM CD NumType=Card _ _ _ SpaceAfter=No 53 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 54 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 3710 # text = Concentration of receptors of hormonal form of 1,25(OH)2D3 was found to be minimal in lymphocytes under conditions of chronic kidney insufficiency, while their expression, after the dioxyvit action, was detected only in patients with glomerulonephritis. 1 Concentration concentration NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 receptors receptor NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 hormonal hormonal ADJ JJ Degree=Pos _ _ _ _ 6 form form NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 OH Oh INTJ UH _ _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 2D3 2D3 NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 be be AUX VB VerbForm=Inf _ _ _ _ 17 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 20 under under ADP IN _ _ _ _ _ 21 conditions condition NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 24 kidney kidney NOUN NN Number=Sing _ _ _ _ 25 insufficiency insufficiency NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 while while SCONJ IN _ _ _ _ _ 28 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 after after ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 dioxyvit dioxyvit NOUN NN Number=Sing _ _ _ _ 34 action action NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 37 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 only only ADV RB _ _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 patients patient NOUN NN Number=Sing _ _ _ _ 41 with with ADP IN _ _ _ _ _ 42 glomerulonephritis glomerulonephritis NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 3711 # text = Specific calcitropic effect of dioxyvit with simultaneous correction of vitamin D deficiency were apparently responsible for high efficacy of the drug in treatment of calcium metabolism and immunity impairments in children with renal deteriorations at the step of chronic kidney insufficiency. 1 Specific specific ADJ JJ Degree=Pos _ _ _ _ 2 calcitropic calcitropic ADJ JJ Degree=Pos _ _ _ _ 3 effect effect NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 dioxyvit dioxyvit NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 simultaneous simultaneous ADJ JJ Degree=Pos _ _ _ _ 8 correction correction NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 vitamin vitamin ADJ JJ Degree=Pos _ _ _ _ 11 D would NOUN NN Number=Sing _ _ _ _ 12 deficiency deficiency NOUN NN Number=Sing _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 apparently apparently ADV RB _ _ _ _ _ 15 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 high high ADJ JJ Degree=Pos _ _ _ _ 18 efficacy efficacy NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 drug drug NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 treatment treatment NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 calcium calcium NOUN NN Number=Sing _ _ _ _ 26 metabolism metabolism NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 immunity immunity NOUN NN Number=Sing _ _ _ _ 29 impairments impairment NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 children child NOUN NNS Number=Plur _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 renal renal ADJ JJ Degree=Pos _ _ _ _ 34 deteriorations deterioration NOUN NNS Number=Plur _ _ _ _ 35 at at ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 step step NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 40 kidney kidney NOUN NN Number=Sing _ _ _ _ 41 insufficiency insufficiency NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3712 # text = Document 003003547 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003547 003003547 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3713 # text = Detection of intracellular phosphorylated STAT-1 by flow cytometry. 1 Detection detection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 intracellular intracelular ADJ JJ Degree=Pos _ _ _ _ 4 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 STAT Stat NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 flow flow ADJ JJ Degree=Pos _ _ _ _ 10 cytometry cytometry NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3714 # text = We have applied flow cytometry to the investigation of interferon-gamma activation of human monocytes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 applied apply VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 flow flow ADJ JJ Degree=Pos _ _ _ _ 5 cytometry cytometry NOUN NN Number=Sing _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 investigation investigation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 gamma gamma NOUN NN Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3715 # text = This approach uses monoclonal antibodies that distinguish between the native and phosphorylated forms of STAT-1. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 approach approach NOUN NN Number=Sing _ _ _ _ 3 uses use VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 5 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 distinguish distinguish VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 between between ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 native native NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 forms form NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 STAT STAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3716 # text = It enables rapid and quantitative assessment of STAT-1 phosphorylation on a discrete cell basis and is both more sensitive and less time consuming than immunoblotting. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 enables enable VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 quantitative quantitative ADJ JJ Degree=Pos _ _ _ _ 6 assessment assessment NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 STAT STAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 discrete discrete NOUN NN Number=Sing _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 basis basis NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 both both ADV RB _ _ _ _ _ 20 more more ADV RBR _ _ _ _ _ 21 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 less less ADJ JJR Degree=Cmp _ _ _ _ 24 time time NOUN NN Number=Sing _ _ _ _ 25 consuming consume VERB VBG VerbForm=Ger _ _ _ _ 26 than than SCONJ IN _ _ _ _ _ 27 immunoblotting immunoblott VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3717 # text = Furthermore, it allows for discrimination between a mixture of cells that differ in their response to interferon-gamma. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 4 allows allow VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 discrimination discrimination NOUN NN Number=Sing _ _ _ _ 7 between between ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 mixture mixture NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 differ differ VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 response response NOUN NN Number=Sing _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 interferon interferon NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3718 # text = This approach should allow for the evaluation of different intracellular signaling pathways using a combination of monoclonal reagents that are specific for native and activation modified proteins. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 approach approach NOUN NN Number=Sing _ _ _ _ 3 should should AUX MD VerbForm=Fin _ _ _ _ 4 allow allow VERB VB VerbForm=Inf _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 evaluation evaluation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 different different ADJ JJ Degree=Pos _ _ _ _ 10 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 11 signaling signaling NOUN NN Number=Sing _ _ _ _ 12 pathways pathway NOUN NNS Number=Plur _ _ _ _ 13 using use VERB VBG VerbForm=Ger _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 combination combination NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 18 reagents reagent NOUN NNS Number=Plur _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 specific specific ADJ JJ Degree=Pos _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 native native NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 modified modify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3719 # text = Application of this form of testing should prove valuable in screening for signaling defects in selected patients with recurrent infections. 1 Application application NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 form form NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 testing testing NOUN NN Number=Sing _ _ _ _ 7 should should AUX MD VerbForm=Fin _ _ _ _ 8 prove prove VERB VB VerbForm=Inf _ _ _ _ 9 valuable valuable ADJ JJ Degree=Pos _ _ _ _ 10 in in SCONJ IN _ _ _ _ _ 11 screening screen VERB VBG VerbForm=Ger _ _ _ _ 12 for for SCONJ IN _ _ _ _ _ 13 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 14 defects defect NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 selected selected VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 patients patient NOUN NNS Number=Plur _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 recurrent recurrent ADJ JJ Degree=Pos _ _ _ _ 20 infections infection NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3720 # text = In addition, this technique should permit dissection of a full range of cellular signaling pathways at the protein level. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 technique technique NOUN NN Number=Sing _ _ _ _ 6 should should AUX MD VerbForm=Fin _ _ _ _ 7 permit permit VERB VB VerbForm=Inf _ _ _ _ 8 dissection dissection NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 full full ADJ JJ Degree=Pos _ _ _ _ 12 range range NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 15 signaling signaling NOUN NN Number=Sing _ _ _ _ 16 pathways pathway NOUN NNS Number=Plur _ _ _ _ 17 at at ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3721 # text = Document 003003552 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003552 003003552 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3722 # text = Two glucocorticoid binding sites on the human glucocorticoid receptor. 1 Two two NUM CD NumType=Card _ _ _ _ 2 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ _ 3 binding bind VERB VBG VerbForm=Ger _ _ _ _ 4 sites site NOUN NNS Number=Plur _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3723 # text = Glucocorticoids are known to have a lytic effect in leukemic cells via interactions with the glucocorticoid receptor (GR). 1 Glucocorticoids Glucocorticoid NOUN NNS Number=Plur _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 have have VERB VB VerbForm=Inf _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 8 effect effect NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 via via ADP IN _ _ _ _ _ 13 interactions interaction NOUN NNS Number=Plur _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 GR GR NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3724 # text = Cortisol and various synthetic glucocorticoids bind to the GR with one-site kinetics. 1 Cortisol Cortisol PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 various various ADJ JJ Degree=Pos _ _ _ _ 4 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 5 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 6 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 GR Gr NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 one one NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 site site NOUN NN Number=Sing _ _ _ _ 14 kinetics kinetic NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3725 # text = Cortivazol (CVZ) is a unique, high potency synthetic glucocorticoid, which has a phenylpyrazol fused to the A-ring of the steroid nucleus and displays binding consistent with two or more sites in the cytosol from CEM C7 cells (a human acute lymphoblastic T-cell line). 1 Cortivazol Cortivazol PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 CVZ CVZ PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 unique unique ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 high high ADJ JJ Degree=Pos _ _ _ _ 10 potency potency NOUN NN Number=Sing _ _ _ _ 11 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 12 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 phenylpyrazol phenylpyrazol NOUN NN Number=Sing _ _ _ _ 18 fused fused VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 ring ring NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 steroid steroid ADJ JJ Degree=Pos _ _ _ _ 27 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 displays display NOUN NNS Number=Plur _ _ _ _ 30 binding bind VERB VBG VerbForm=Ger _ _ _ _ 31 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 two two NUM CD NumType=Card _ _ _ _ 34 or or CCONJ CC _ _ _ _ _ 35 more more ADJ JJR Degree=Cmp _ _ _ _ 36 sites site NOUN NNS Number=Plur _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 40 from from ADP IN _ _ _ _ _ 41 CEM CEM PROPN NNP Number=Sing _ _ _ _ 42 C7 C7 NUM CD NumType=Card _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ _ 44 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 45 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 46 human human ADJ JJ Degree=Pos _ _ _ _ 47 acute acute NOUN NN Number=Sing _ _ _ _ 48 lymphoblastic lymphoblastic ADJ JJ Degree=Pos _ _ _ _ 49 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 cell cell NOUN NN Number=Sing _ _ _ _ 51 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 3726 # text = It has previously been shown that the lower affinity class of sites are similar in affinity and site molarity to those recognized by dexamethasone. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 lower lower ADJ JJR Degree=Cmp _ _ _ _ 9 affinity affinity NOUN NN Number=Sing _ _ _ _ 10 class class NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 sites site NOUN NNS Number=Plur _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 similar similar ADJ JJ Degree=Pos _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 affinity affinity NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ _ 19 molarity molarity NOUN NN Number=Sing _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 22 recognized recognize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3727 # text = The higher affinity sites bind CVZ with 20- to 50-fold greater affinity, consistent with CVZ's enhanced biological effects. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 higher higher ADJ JJR Degree=Cmp _ _ _ _ 3 affinity affinity NOUN NN Number=Sing _ _ _ _ 4 sites site NOUN NNS Number=Plur _ _ _ _ 5 bind bind ADP IN _ _ _ _ _ 6 CVZ CVZ PROPN NNP Number=Sing _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT : _ _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 fold fold VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 14 greater greater ADJ JJR Degree=Cmp _ _ _ _ 15 affinity affinity NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 consistent consistent VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 CVZ CVZ PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 's 's PART POS _ _ _ _ _ 21 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 biological biological ADJ JJ Degree=Pos _ _ _ _ 23 effects effect NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3728 # text = In mutant leukemic cells resistant to the lytic effects of dexamethasone, CVZ both lyses the cells and recognizes a single class of sites similar to the high affinity site in CEM C7 cells. 1 In in ADP IN _ _ _ _ _ 2 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 3 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 resistant resistant VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 9 effects effect NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 CVZ CVZ PROPN NNP Number=Sing _ _ _ _ 14 both both CCONJ CC _ _ _ _ _ 15 lyses lysis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 recognizes recognize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 single single ADJ JJ Degree=Pos _ _ _ _ 22 class class NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 sites site NOUN NNS Number=Plur _ _ _ _ 25 similar similar ADJ JJ Degree=Pos _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 high high ADJ JJ Degree=Pos _ _ _ _ 29 affinity affinity NOUN NN Number=Sing _ _ _ _ 30 site site NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 CEM CEM PROPN NNP Number=Sing _ _ _ _ 33 C7 C7 NUM CD NumType=Card _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 3729 # text = We have carried out experiments to define the nature of the higher affinity CVZ binding site. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 carried carry VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 out out ADP RP _ _ _ _ _ 5 experiments experiment NOUN NNS Number=Plur _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 define define VERB VB VerbForm=Inf _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 nature nature NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 higher higher ADJ JJR Degree=Cmp _ _ _ _ 13 affinity affinity NOUN NN Number=Sing _ _ _ _ 14 CVZ CVZ SCONJ IN Abbr=Yes _ _ _ _ 15 binding bind VERB VBG VerbForm=Ger _ _ _ _ 16 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3730 # text = We now show that: 1) CVZ has more than one binding site in a second, independent, B-cell line, IM-9; 2) the antiglucocorticoid RU 38486 is able to block both CVZ's higher and lower affinity sites; 3) all of CVZ's binding sites are on a protein immunologically indistinguishable from the human GR; and 4) freshly isolated clones of CVZ-resistant cells have lost all binding sites for CVZ. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 now now ADV RB _ _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ SpaceAfter=No 5 : : PUNCT : _ _ _ _ _ 6 1 1 X LS _ _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 CVZ Cvz NOUN NN Number=Sing _ _ _ _ 9 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 more more ADJ JJR Degree=Cmp _ _ _ _ 11 than than ADP IN _ _ _ _ _ 12 one one NUM CD NumType=Card _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 independent independent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 B b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 IM Im NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 ; ; PUNCT , _ _ _ _ _ 30 2 2 X LS _ _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 antiglucocorticoid antiglucocorticoid ADJ JJ Degree=Pos _ _ _ _ 34 RU RU PROPN NNP Number=Sing _ _ _ _ 35 38486 38486 NUM CD NumType=Card _ _ _ _ 36 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 able able ADJ JJ Degree=Pos _ _ _ _ 38 to to PART TO _ _ _ _ _ 39 block block VERB VB VerbForm=Inf _ _ _ _ 40 both both CCONJ CC _ _ _ _ _ 41 CVZ Cvz PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 's 's PART POS _ _ _ _ _ 43 higher higher ADJ JJR Degree=Cmp _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 lower lower ADJ JJR Degree=Cmp _ _ _ _ 46 affinity affinity NOUN NN Number=Sing _ _ _ _ 47 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 ; ; PUNCT , _ _ _ _ _ 49 3 3 X LS _ _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ _ 51 all all DET DT _ _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 CVZ CVZ PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 's 's PART POS _ _ _ _ _ 55 binding binding NOUN NN Number=Sing _ _ _ _ 56 sites site NOUN NNS Number=Plur _ _ _ _ 57 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 58 on on ADP IN _ _ _ _ _ 59 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 60 protein protein NOUN NN Number=Sing _ _ _ _ 61 immunologically immunologically ADV RB _ _ _ _ _ 62 indistinguishable indistinguishable ADJ JJ Degree=Pos _ _ _ _ 63 from from ADP IN _ _ _ _ _ 64 the the DET DT Definite=Def|PronType=Art _ _ _ _ 65 human human ADJ JJ Degree=Pos _ _ _ _ 66 GR Gr NOUN NN Number=Sing _ _ _ SpaceAfter=No 67 ; ; PUNCT , _ _ _ _ _ 68 and and CCONJ CC _ _ _ _ _ 69 4 4 X LS _ _ _ _ SpaceAfter=No 70 ) ) PUNCT -RRB- _ _ _ _ _ 71 freshly freshly ADV RB _ _ _ _ _ 72 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 73 clones clone NOUN NNS Number=Plur _ _ _ _ 74 of of ADP IN _ _ _ _ _ 75 CVZ CVZ PROPN NNP Number=Sing _ _ _ SpaceAfter=No 76 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 77 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 78 cells cell NOUN NNS Number=Plur _ _ _ _ 79 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 80 lost lose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 81 all all DET PDT _ _ _ _ _ 82 binding binding VERB VBG VerbForm=Ger _ _ _ _ 83 sites site NOUN NNS Number=Plur _ _ _ _ 84 for for ADP IN _ _ _ _ _ 85 CVZ CVZ PROPN NNP Number=Sing _ _ _ SpaceAfter=No 86 . . PUNCT . _ _ _ _ _ # sent_id = 3731 # text = These data indicate that CVZ is recognizing two glucocorticoid binding sites on the human GR or a protein very similar to it. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 CVZ CVZ PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 recognizing recognize VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 8 two two NUM CD NumType=Card _ _ _ _ 9 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ _ 10 binding bind VERB VBG VerbForm=Ger _ _ _ _ 11 sites site NOUN NNS Number=Plur _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 GR Gr NOUN NN Number=Sing _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 very very ADV RB _ _ _ _ _ 20 similar similar ADJ JJ Degree=Pos _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 it it PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3732 # text = Document 003003553 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003553 003003553 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3733 # text = Transcriptional activation of the macrophage colony-stimulating factor gene by IL-2 is associated with secretion of bioactive macrophage colony-stimulating factor protein by monocytes and involves activation of the transcription factor NF-kappa B. Human peripheral blood monocytes (Mo) constitutively display the beta-chain of the receptor for IL-2, whereas expression of the IL-2R alpha-chain is not constitutive but inducible with IL-2. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 6 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 secretion secretion NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 bioactive bioactive ADJ JJ Degree=Pos _ _ _ _ 21 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 22 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 stimulating stimulate VERB VBG VerbForm=Ger _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 involves involve NOUN NNS Number=Plur _ _ _ _ 31 activation activation NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ _ 36 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 kappa kappa PROPN NNP Number=Sing _ _ _ _ 39 B. B. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n 40 Human Human PROPN NNP Number=Sing _ _ _ _ 41 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 42 blood blood NOUN NN Number=Sing _ _ _ _ 43 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 44 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 45 Mo mo PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 ) ) PUNCT -RRB- _ _ _ _ _ 47 constitutively constitutively ADV RB _ _ _ _ _ 48 display display VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 chain chain NOUN NN Number=Sing _ _ _ _ 53 of of ADP IN _ _ _ _ _ 54 the the DET DT Definite=Def|PronType=Art _ _ _ _ 55 receptor receptor NOUN NN Number=Sing _ _ _ _ 56 for for ADP IN _ _ _ _ _ 57 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 58 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 59 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 60 , , PUNCT , _ _ _ _ _ 61 whereas whereas SCONJ IN _ _ _ _ _ 62 expression expression NOUN NN Number=Sing _ _ _ _ 63 of of ADP IN _ _ _ _ _ 64 the the DET DT Definite=Def|PronType=Art _ _ _ _ 65 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 66 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 67 2R 2r PROPN NNP Number=Sing _ _ _ _ 68 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 69 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 70 chain chain NOUN NN Number=Sing _ _ _ _ 71 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 72 not not PART RB _ _ _ _ _ 73 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 74 but but CCONJ CC _ _ _ _ _ 75 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 76 with with ADP IN _ _ _ _ _ 77 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 78 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 79 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 80 . . PUNCT . _ _ _ _ _ # sent_id = 3734 # text = Here we report that binding of human IL-2 to its binding site leads to transcriptional activation of the macrophage CSF (M-CSF) gene in Mo resulting in accumulation of M-CSF mRNA and subsequent release of bioactive M-CSF protein as demonstrated by ELISA and inhibition of IL-2 induced release of an activity-stimulating growth of monocyte-type colonies by a neutralizing anti-M-CSF antibody. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 binding bind VERB VBG VerbForm=Ger _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 binding binding VERB VBG VerbForm=Ger _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ _ 15 leads lead NOUN NNS Number=Plur _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 22 CSF CSF NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 CSF CSF NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 Mo mo PROPN NNP Number=Sing _ _ _ _ 31 resulting result VERB VBG VerbForm=Ger _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 M m PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 CSF CSF PROPN NNP Number=Sing _ _ _ _ 38 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 41 release release NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 bioactive bioactive ADJ JJ Degree=Pos _ _ _ _ 44 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 CSF CSF NOUN NN Number=Sing _ _ _ _ 47 protein protein NOUN NN Number=Sing _ _ _ _ 48 as as SCONJ IN _ _ _ _ _ 49 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 by by ADP IN _ _ _ _ _ 51 ELISA ELISA PROPN NNP Number=Sing _ _ _ _ 52 and and CCONJ CC _ _ _ _ _ 53 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 54 of of ADP IN _ _ _ _ _ 55 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 56 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 57 2 2 NUM CD NumType=Card _ _ _ _ 58 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 59 release release NOUN NN Number=Sing _ _ _ _ 60 of of ADP IN _ _ _ _ _ 61 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 62 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 63 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 64 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 65 growth growth NOUN NN Number=Sing _ _ _ _ 66 of of ADP IN _ _ _ _ _ 67 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 68 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 69 type type NOUN NN Number=Sing _ _ _ _ 70 colonies colony NOUN NNS Number=Plur _ _ _ _ 71 by by ADP IN _ _ _ _ _ 72 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 73 neutralizing neutralizing VERB VBG VerbForm=Ger _ _ _ _ 74 anti-M anti-M NOUN NN Number=Sing _ _ _ SpaceAfter=No 75 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 76 CSF CSF NOUN NN Number=Sing _ _ _ _ 77 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 78 . . PUNCT . _ _ _ _ _ # sent_id = 3735 # text = Transcriptional activation of the M-CSF gene by IL-2 is preceded by enhanced binding activity of the transcription factor NF-kappa B to its recognition sequence in the 5' regulatory enhancer region of the M-CSF gene. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 CSF CSF PROPN NNP Number=Sing _ _ _ _ 8 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 preceded preced VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 29 recognition recognition NOUN NN Number=Sing _ _ _ _ 30 sequence sequence NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 ' 's PUNCT `` _ _ _ _ _ 35 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 36 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 37 region region NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 CSF Csf NOUN NN Number=Sing _ _ _ _ 43 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 3736 # text = Moreover, using a heterologous promoter (herpes thymidine kinase) construct containing the NF-kappa B consensus sequence, it is shown that NF-kappa B binding by an IL-2-induced monocyte-derived nuclear protein confers reporter gene (human growth hormone) activity. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 using use VERB VBG VerbForm=Ger _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 6 promoter promoter NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 herpes herpes VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 thymidine thymidine PRON PRP _ _ _ _ _ 10 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 construct construct NOUN NN Number=Sing _ _ _ _ 13 containing contain VERB VBG VerbForm=Ger _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 consensus consensus NOUN NN Number=Sing _ _ _ _ 20 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 binding bind VERB VBG VerbForm=Ger _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 42 protein protein NOUN NN Number=Sing _ _ _ _ 43 confers confer NOUN NNS Number=Plur _ _ _ _ 44 reporter reporter NOUN NN Number=Sing _ _ _ _ 45 gene gene NOUN NN Number=Sing _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 human human ADJ JJ Degree=Pos _ _ _ _ 48 growth growth NOUN NN Number=Sing _ _ _ _ 49 hormone hormone NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ _ 51 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 3737 # text = Taken together, our findings indicate that IL-2 induces gene expression of M-CSF in human blood-derived Mo and provide evidence for involvement of NF-kappa B in transcriptional regulation of this gene. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 5 findings finding NOUN NNS Number=Plur _ _ _ _ 6 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 induces induces NOUN NNS Number=Plur _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 M- m- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 CSF Csf NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 blood blood NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 Mo mo PROPN NNP Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 provide provide VERB VB VerbForm=Inf _ _ _ _ 25 evidence evidence NOUN NN Number=Sing _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 involvement involvement NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappa kappa NOUN NN Number=Sing _ _ _ _ 32 B b NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 35 regulation regulation NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 38 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3738 # text = Document 003003557 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003557 003003557 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3739 # text = Human T-cell leukemia virus type 1 Tax protein induces the expression of STAT1 and STAT5 genes in T-cells. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 type type NOUN NN Number=Sing _ _ _ _ 7 1 1 NUM CD NumType=Card _ _ _ _ 8 Tax tax NOUN NN Number=Sing _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 STAT1 STAT1 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 STAT5 STAT5 NUM CD NumType=Card _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3740 # text = Human T-cell leukemia virus type 1 (HTLV-1) Tax transforms normal T-cells in the presence of interleukin (IL)-2 in vitro. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 type type NOUN NN Number=Sing _ _ _ _ 7 1 1 NUM CD NumType=Card _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 HTLV HTLV NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 X LS _ _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 Tax tax NOUN NN Number=Sing _ _ _ _ 14 transforms transform NOUN NNS Number=Plur _ _ _ _ 15 normal normal ADJ JJ Degree=Pos _ _ _ _ 16 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 presence presence NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 vitro vitro NUM CD NumType=Card _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3741 # text = STAT is a family of transcription factors that play a pivotal role in cytokine-induced functions of a various type of cells. 1 STAT Stat PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 family family NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factors factor NOUN NNS Number=Plur _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 play play VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 pivotal pivotal ADJ JJ Degree=Pos _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 functions function NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 various various ADJ JJ Degree=Pos _ _ _ _ 21 type type NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3742 # text = We investigated the involvement of STATs in the transformation of T-cells by HTLV-1. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 involvement involvement NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 STATs STATs PROPN NNPS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transformation transformation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3743 # text = HTLV-1-transformed T-cell lines expressed higher amounts of STAT1, STAT3 and STAT5 RNA and proteins than virus-negative T cells. 1 HTLV haHtlve NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 lines line NOUN NNS Number=Plur _ _ _ _ 9 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 higher higher ADJ JJR Degree=Cmp _ _ _ _ 11 amounts amount NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 STAT1 stat1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 STAT3 STAT3 NUM CD NumType=Card _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 STAT5 STAT5 PROPN NNP Number=Sing _ _ _ _ 18 RNA RNA PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 proteins protein NOUN NNS Number=Plur _ _ _ _ 21 than than ADP IN _ _ _ _ _ 22 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 negative negative ADJ JJ Degree=Pos _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3744 # text = The expression of STAT1 and STAT5 in a human T-cell line was induced by Tax. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 STAT1 stat1 NUM CD NumType=Card _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 STAT5 stat5 NUM CD NumType=Card _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 line line NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 Tax tax PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3745 # text = IL-2 induced the DNA binding activity of STAT3 and STAT5 of a HTLV-1-transformed cell line and then stimulated its proliferation. 1 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ _ 7 binding binde VERB VBG VerbForm=Ger _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 STAT3 STAT3 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 STAT5 STAT5 NUM CD NumType=Card _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 HTLV HTLV NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 line line NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 then then ADV RB PronType=Dem _ _ _ _ 24 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 26 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3746 # text = In contrast, IL-2 did neither in a cell line lacking STAT3 and STAT5. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 neither neither VERB VB VerbForm=Inf _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 line line NOUN NN Number=Sing _ _ _ _ 13 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 14 STAT3 STAT3 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 STAT5 stat5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3747 # text = The expression of STAT1, STAT3 and STAT5 mRNAs were also induced by a T-cell mitogen in normal human peripheral blood mononuclear cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 STAT1 stat1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 STAT3 STAT3 NUM CD NumType=Card _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 STAT5 STAT5 NUM CD NumType=Card _ _ _ _ 9 mRNAs mRNA NOUN NNS Number=Plur _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 also also ADV RB _ _ _ _ _ 12 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 mitogen mitogen NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 normal normal ADJ JJ Degree=Pos _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 22 blood blood NOUN NN Number=Sing _ _ _ _ 23 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3748 # text = Our results suggest that the induction of STAT1 and STAT5 by Tax enhances cytokine-induced functions of virus-infected T-cells, hence the induction may play a role in IL-2-dependent transformation steps of T-cells by HTLV-1. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 induction induction NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 STAT1 stat1 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 STAT5 stat5 NUM CD NumType=Card _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 Tax tax NOUN NN Number=Sing _ _ _ _ 13 enhances enhance NOUN NNS Number=Plur _ _ _ _ 14 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 functions function NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 virus-infected virus-infected ADJ JJ Degree=Pos _ _ _ _ 20 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 hence hence ADV RB _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 induction induction NOUN NN Number=Sing _ _ _ _ 26 may may AUX MD VerbForm=Fin _ _ _ _ 27 play play VERB VB VerbForm=Inf _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 role role NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 36 transformation transformation NOUN NN Number=Sing _ _ _ _ 37 steps step NOUN NNS Number=Plur _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 cells cell NOUN NNS Number=Plur _ _ _ _ 41 by by ADP IN _ _ _ _ _ 42 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3749 # text = Document 003003559 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003559 003003559 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3750 # text = A microtitre assay system for glucocorticoid receptors: 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 microtitre microtitre ADJ JJ Degree=Pos _ _ _ _ 3 assay assay NOUN NN Number=Sing _ _ _ _ 4 system system NOUN NN Number=Sing _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 7 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 : : PUNCT : _ _ _ _ _ # sent_id = 3751 # text = decreased receptor concentration in myocardial infarction. 1 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ _ 3 concentration concentration NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 myocardial myocardial ADJ JJ Degree=Pos _ _ _ _ 6 infarction infarction NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3752 # text = A major difficulty in determination of glucocorticoid receptor sites is the very complicated assay procedure. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 major major ADJ JJ Degree=Pos _ _ _ _ 3 difficulty difficulty NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 determination determination NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 sites site NOUN NNS Number=Plur _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 very very ADJ JJ Degree=Pos _ _ _ _ 13 complicated complicated ADJ JJ Degree=Pos _ _ _ _ 14 assay assay NOUN NN Number=Sing _ _ _ _ 15 procedure procedure NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 3753 # text = Therefore, we describe a microtitre assay system for glucocorticoid receptors which is a whole-cell competitive binding radioassay using [3H]-dexamethasone as radioligand. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 describe describe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 microtitre microtitre NOUN NN Number=Sing _ _ _ _ 7 assay assay NOUN NN Number=Sing _ _ _ _ 8 system system NOUN NN Number=Sing _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 11 receptors receptor NOUN NNS Number=Plur _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 whole whole ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 competitive competitive ADJ JJ Degree=Pos _ _ _ _ 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 radioassay radioassay NOUN NN Number=Sing _ _ _ _ 21 using use VERB VBG VerbForm=Ger _ _ _ _ 22 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 H h NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 28 as as ADP IN _ _ _ _ _ 29 radioligand radioligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3754 # text = This modification of a previously described protocol simplifies and reduces laboratory work and allows assay reproducibility to be controlled more reliably. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 modification modification NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 previously previously ADV RB _ _ _ _ _ 6 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 protocol protocol NOUN NN Number=Sing _ _ _ _ 8 simplifies simplify NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 reduces reduce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 laboratory laboratory ADJ JJ Degree=Pos _ _ _ _ 12 work work NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 allows allow VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 assay assay ADJ JJ Degree=Pos _ _ _ _ 16 reproducibility reproducibility NOUN NN Number=Sing _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 more more ADV RBR _ _ _ _ _ 21 reliably reliably ADV RB _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3755 # text = Thus enabled to perform the test on multiple blood samples in parallel, we investigated cardiac infarction patients over a 12-day period to test if glucocorticoid receptor binding is altered in this 'stressful' disease. 1 Thus thus ADV RB _ _ _ _ _ 2 enabled enable VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 perform perform VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 test test NOUN NN Number=Sing _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 9 blood blood NOUN NN Number=Sing _ _ _ _ 10 samples sample NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 parallel parallel NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 15 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 cardiac cardiac ADJ JJ Degree=Pos _ _ _ _ 17 infarction infarction NOUN NN Number=Sing _ _ _ _ 18 patients patient NOUN NN Number=Sing _ _ _ _ 19 over over ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 day day NOUN NN Number=Sing _ _ _ _ 24 period period NOUN NN Number=Sing _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 test test VERB VB VerbForm=Inf _ _ _ _ 27 if if SCONJ IN _ _ _ _ _ 28 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ _ 29 receptor receptor NOUN NN Number=Sing _ _ _ _ 30 binding binding VERB VBG VerbForm=Ger _ _ _ _ 31 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 altered alter VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 35 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 36 stressful stressful ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 ' ' PUNCT '' _ _ _ _ _ 38 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 3756 # text = On the first day of the disease, glucocorticoid receptor capacity was significantly decreased without alteration of the receptor-ligand affinity, whereas on days 4 and 12 the number of receptor sites was normal again. 1 On on ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 4 day day NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 capacity capacity NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 significantly significantly ADV RB _ _ _ _ _ 14 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 without without ADP IN _ _ _ _ _ 16 alteration alteration NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 ligand ligand NOUN NN Number=Sing _ _ _ _ 22 affinity affinity NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 whereas whereas SCONJ IN _ _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 days day NOUN NNS Number=Plur _ _ _ _ 27 4 4 NUM CD NumType=Card _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 12 12 NUM CD NumType=Card _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 number number NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 receptor receptor NOUN NN Number=Sing _ _ _ _ 34 sites site NOUN NNS Number=Plur _ _ _ _ 35 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 36 normal normal ADJ JJ Degree=Pos _ _ _ _ 37 again again ADV RB _ _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 3757 # text = This result fits well into the general observation of stress-induced down-regulation of immune responses. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 result result NOUN NN Number=Sing _ _ _ _ 3 fits fit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 well well ADV RB Degree=Pos _ _ _ _ 5 into into ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 general general ADJ JJ Degree=Pos _ _ _ _ 8 observation observation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 stress stress NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 down down NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 regulation regulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 immune immune ADJ JJ Degree=Pos _ _ _ _ 18 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3758 # text = Document 003003563 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003563 003003563 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3759 # text = The suppression of T cell function and NF(kappa)B expression by serine protease inhibitors is blocked by N-acetylcysteine. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 suppression suppression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 function function NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 kappa kappa X FW Foreign=Yes _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 B b ADJ JJ Degree=Pos _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 serine serine NOUN NN Number=Sing _ _ _ _ 16 protease protease NOUN NN Number=Sing _ _ _ _ 17 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 N- n- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 acetylcysteine acetylcysteine NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3760 # text = Direct evidence that N-acetylcysteine (NAC) enhances the immune response of peripheral blood T cells at the level of NF(kappa)B is presented. 1 Direct direct ADJ JJ Degree=Pos _ _ _ _ 2 evidence evidence NOUN NN Number=Sing _ _ _ _ 3 that that PRON WDT PronType=Rel _ _ _ _ 4 N- N- SYM NFP _ _ _ _ SpaceAfter=No 5 acetylcysteine acetylcysteine NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 NAC NAC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 enhances enhance VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 immune immune ADJ JJ Degree=Pos _ _ _ _ 12 response response NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 15 blood blood NOUN NN Number=Sing _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 at at ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 level level NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 kappa kappa X FW Foreign=Yes _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 B b NOUN NN Number=Sing _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 presented presented VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3761 # text = In addition, NAC blocks the suppression of T cell mitogenesis and cytokine production by protease inhibitors such as N-tosylphenylalanine chloromethyl ketone (TPCK). 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 NAC NAC PROPN NNP Number=Sing _ _ _ _ 5 blocks block NOUN NNS Number=Plur _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 suppression suppression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 mitogenesis mitogenesis NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 14 production production NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 protease protease NOUN NN Number=Sing _ _ _ _ 17 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 18 such such ADJ JJ Degree=Pos _ _ _ _ 19 as as ADP IN _ _ _ _ _ 20 N N PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 tosylphenylalanine tosylphenylalanine NUM CD NumType=Card _ _ _ _ 23 chloromethyl chloromethyl NOUN NN Number=Sing _ _ _ _ 24 ketone ketone NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 TPCK TPCK NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3762 # text = The proliferative responses of purified CD4+ or CD8+ T cells are suppressed more strongly by TPCK when anti-CD28 rather than the phorbol ester PMA is used as the mitogenic coactivator. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 3 responses response NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 purified purified VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 + + SYM SYM _ _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 CD8 CD8 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 + + SYM SYM _ _ _ _ _ 11 T t NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 more more ADV RBR _ _ _ _ _ 16 strongly strongly ADV RB _ _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 TPCK TPCK NUM CD NumType=Card _ _ _ _ 19 when when ADV WRB PronType=Int _ _ _ _ 20 anti-CD28 anti-CD28 NUM CD NumType=Card _ _ _ _ 21 rather rather ADV RB _ _ _ _ _ 22 than than ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 25 ester ester NOUN NN Number=Sing _ _ _ _ 26 PMA PMA PROPN NNP Number=Sing _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 as as ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 32 coactivator coactivator NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3763 # text = Cytokine (IL-2, IL-6, INF-gamma) production is inhibited 95-100% by concentrations of TPCK that totally suppress the mitogenesis of CD4+ or CD8+ cells. 1 Cytokine Cytokine PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 INF Inf NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 production production NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 95 95 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - SYM SYM _ _ _ _ SpaceAfter=No 20 100 100 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 % % SYM NN Number=Sing _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 TPCK TPCK NOUN NN Number=Sing _ _ _ _ 26 that that PRON WDT PronType=Rel _ _ _ _ 27 totally totally ADV RB _ _ _ _ _ 28 suppress suppress VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 mitogenesis mitogenesis NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 + + SYM SYM _ _ _ _ _ 34 or or CCONJ CC _ _ _ _ _ 35 CD8 CD8 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 + + SYM SYM _ _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 3764 # text = Using electrophoretic mobility shift assays, we find that TPCK virtually abolishes (to less than 1%) the levels of NF(kappa)B (but not Oct-1) found in nuclear and whole cell extracts of activated T cells. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 3 mobility mobility NOUN NN Number=Sing _ _ _ _ 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 8 find find VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 10 TPCK Tpck NOUN NN Number=Sing _ _ _ _ 11 virtually virtually ADV RB _ _ _ _ _ 12 abolishes abolish ADV RB _ _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 to to ADP IN _ _ _ _ _ 15 less less ADJ JJR Degree=Cmp _ _ _ _ 16 than than ADP IN _ _ _ _ _ 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 levels level NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 kappa kappa X FW Foreign=Yes _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 B b NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 but but CCONJ CC _ _ _ _ _ 30 not not ADV RB _ _ _ _ _ 31 Oct Oct ADV RB _ _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 1 1 X LS _ _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 whole whole ADJ JJ Degree=Pos _ _ _ _ 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 extracts extract NOUN NNS Number=Plur _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 T T PROPN NNP Number=Sing _ _ _ _ 45 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 3765 # text = Strikingly, the immunosuppressive effects of TPCK are blocked when T cells are pretreated for 15 min with 5 mM NAC. 1 Strikingly strikingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 TPCK Tpck NOUN NN Number=Sing _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 when when ADV WRB PronType=Int _ _ _ _ 11 T t NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 pretreated pretreate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 15 15 NUM CD NumType=Card _ _ _ _ 17 min min NOUN NNS Number=Plur _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 5 5 NUM CD NumType=Card _ _ _ _ 20 mM mm PROPN NNP Number=Sing _ _ _ _ 21 NAC Nac PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3766 # text = NAC not only blocks the effect of TPCK but enhances mitogenesis and cytokine production (>2.5-fold in some cases) upon activation of unsuppressed T cells. 1 NAC Nac NOUN NN Number=Sing _ _ _ _ 2 not not ADV RB _ _ _ _ _ 3 only only ADV RB _ _ _ _ _ 4 blocks block VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 effect effect NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 TPCK TPCK NOUN NN Number=Sing _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 enhances enhance NOUN NNS Number=Plur _ _ _ _ 11 mitogenesis mitogenesis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 cytokine cytokine VERB VB VerbForm=Inf _ _ _ _ 14 production production NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 > > PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 2.5 2.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 fold fold NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 some some DET DT _ _ _ _ _ 22 cases case NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 upon upon ADP IN _ _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 unsuppressed unsuppressed ADJ JJ Degree=Pos _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3767 # text = Our data support the notion that NF(kappa)B and I(kappa)B proteases play obligate roles in T cell activation and mitogenesis, roles that are enhanced significantly by NAC. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 support support VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 notion notion NOUN NN Number=Sing _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 B b NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 B b NOUN NN Number=Sing _ _ _ _ 18 proteases protease NOUN NNS Number=Plur _ _ _ _ 19 play play VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 obligate obligate ADJ JJ Degree=Pos _ _ _ _ 21 roles role NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 mitogenesis mitogenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 roles role NOUN NNS Number=Plur _ _ _ _ 30 that that PRON WDT PronType=Rel _ _ _ _ 31 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 32 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 significantly significantly ADV RB _ _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 NAC NAC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3768 # text = Document 003003571 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003571 003003571 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3769 # text = Detection in non-erythroid cells of a factor with the binding characteristics of the erythroid cell transcription factor EF1. 1 Detection detection NOUN NN Number=Sing _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 non-erythroid non-erythroid ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 binding binding VERB VBG VerbForm=Ger _ _ _ _ 11 characteristics characteristic NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 EF1 Ef1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3770 # text = The erythroid transcription factor erythroid factor-1 (EF1) plays a critical role in the transcription of erythroid-specific genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 erythroid erythroid NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 -1 -1 NUM CD NumType=Card _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 EF1 Ef1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 critical critical ADJ JJ Degree=Pos _ _ _ _ 14 role role NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 specific specific ADJ JJ Degree=Pos _ _ _ _ 22 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3771 # text = Here we report the presence of a factor with the mobility and sequence-specific DNA-binding characteristics of EF1 at low abundance in a wide variety of non-erythroid cell types. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 presence presence NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 mobility mobility NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 specific specific ADJ JJ Degree=Pos _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 characteristics characteristic NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 EF1 Ef1 NOUN NN Number=Sing _ _ _ _ 22 at at ADP IN _ _ _ _ _ 23 low low ADJ JJ Degree=Pos _ _ _ _ 24 abundance abundance NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 wide wide ADJ JJ Degree=Pos _ _ _ _ 28 variety variety NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 non-erythroid non-erythroid ADJ JJ Degree=Pos _ _ _ _ 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3772 # text = This is the first report of an EF1-like activity in non-erythroid cells and indicates that this factor may play a role in the regulation of genes expressed in such cells. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 5 report report NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 EF EF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 like like ADJ JJ Degree=Pos _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 non-erythroid non-erythroid ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 indicates indicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 may may AUX MD VerbForm=Fin _ _ _ _ 22 play play VERB VB VerbForm=Inf _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 role role NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 regulation regulation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 genes gene NOUN NNS Number=Plur _ _ _ _ 30 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 such such ADJ JJ Degree=Pos _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3773 # text = Document 003003578 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003578 003003578 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3774 # text = A newly established megakaryoblastic/erythroid cell line that differentiates to red cells in the presence of erythropoietin and produces platelet-like particles. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 newly newly ADV RB _ _ _ _ _ 3 established establish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 megakaryoblastic megakaryoblastic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 line line NOUN NN Number=Sing _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 differentiates differentiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 red red ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 presence presence NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 erythropoietin erythropoietin NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 produces produce NOUN NNS Number=Plur _ _ _ _ 21 platelet platelet ADV RB _ _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 like like ADJ JJ Degree=Pos _ _ _ _ 24 particles particle NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3775 # text = In August, 1992, we established a leukemic cell line (NS-Meg) from a patient in megakaryoblastic transformation of Philadelphia chromosome-positive chronic myeloid leukemia. 1 In in ADP IN _ _ _ _ _ 2 August August PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 1992 1992 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 established establish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 line line NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 NS NS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 Meg Meg PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 patient patient NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 megakaryoblastic megakaryoblastic ADJ JJ Degree=Pos _ _ _ _ 22 transformation transformation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 Philadelphia Philadelphia PROPN NNP Number=Sing _ _ _ _ 25 chromosome chromosome NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 positive positive ADJ JJ Degree=Pos _ _ _ _ 28 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 29 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 30 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3776 # text = The NS-Meg cells were positive for alpha-naphthyl acetate esterase and periodic acid-Schiff (PAS) staining and for surface CD4, CD7, CD13, CD34, CD41a, and glycophorin A antigens. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 NS N PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 Meg Meg PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 positive positive ADJ JJ Degree=Pos _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 naphthyl naphthyl ADJ JJ Degree=Pos _ _ _ _ 12 acetate acetate NOUN NN Number=Sing _ _ _ _ 13 esterase esterase NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 periodic periodic ADJ JJ Degree=Pos _ _ _ _ 16 acid acid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 Schiff Schiff NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 PAS PAS NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 staining stai VERB VBG VerbForm=Ger _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 surface surface NOUN NN Number=Sing _ _ _ _ 26 CD4 CD4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 CD7 CD7 NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 CD13 CD13 NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 CD34 CD34 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 CD41a CD41a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 glycophorin glycophorin VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 38 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 antigens antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 3777 # text = Ultrastructurally, the cells had alpha-granules, demarcation membranes, and platelet peroxidase activity. 1 Ultrastructurally Ultrastructurally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 granules granule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 demarcation demarcation NOUN NN Number=Sing _ _ _ _ 11 membranes membrane NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 platelet platelet NOUN NN Number=Sing _ _ _ _ 15 peroxidase peroxidase NOUN NN Number=Sing _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3778 # text = The NS-Meg cells spontaneously produced platelet-like particles which contained alpha-granules, mitochondria and dense bodies, strongly suggesting platelet production. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 NS N PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 Meg Meg PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 spontaneously spontaneously ADV RB _ _ _ _ _ 7 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 like like ADJ JJ Degree=Pos _ _ _ _ 11 particles particle NOUN NNS Number=Plur _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 contained contain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 granules granule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 mitochondria mitochondria NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 dense dense NOUN NN Number=Sing _ _ _ _ 21 bodies bodie NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 strongly strongly ADV RB _ _ _ _ _ 24 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 25 platelet platelet NOUN NN Number=Sing _ _ _ _ 26 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3779 # text = Erythropoietin (Epo), granulocyte/macrophage colony stimulating factor(GM-CSF), and interleukin 3 (IL-3) promoted the growth of NS-Meg cells. 1 Erythropoietin Erythropoietin PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 Epo Epo PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 9 colony colony NOUN NN Number=Sing _ _ _ _ 10 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 interleukin interleukin ADJ JJ Degree=Pos _ _ _ _ 20 3 3 NUM CD NumType=Card _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 promoted promote VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 growth growth NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 NS NS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 Meg Meg PROPN NNP Number=Sing _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 3780 # text = Phorbol-12-myristate-13-acetate increased the expression of both CD41a and CD61 antigens. 1 Phorbol Phorbol INTJ UH _ _ _ _ SpaceAfter=No 2 -12-myristate -12-myristate VERB VB Mood=Imp|VerbForm=Fin _ _ _ SpaceAfter=No 3 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 -acetate -acetate NOUN NN Number=Sing _ _ _ _ 5 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 both both CCONJ CC _ _ _ _ _ 10 CD41 CD41 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 CD61 Cd61 NOUN NN Number=Sing _ _ _ _ 14 antigens antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3781 # text = Ten-day exposure to Epo induced mature erythroblasts and red cells. 1 Ten ten NUM CD NumType=Card _ _ _ SpaceAfter=No 2 -day -day NOUN NN Number=Sing _ _ _ _ 3 exposure exposure NOUN NN Number=Sing _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 Epo Epo PROPN NNP Number=Sing _ _ _ _ 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 mature mature ADJ JJ Degree=Pos _ _ _ _ 8 erythroblasts erythroblast NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 red red ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 3782 # text = These benzidine-positive cells were positive for hemoglobin F staining. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 benzidine benzidine NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 positive positive ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 positive positive ADJ JJ Degree=Pos _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 hemoglobin hemoglobin NOUN NN Number=Sing _ _ _ _ 10 F f SCONJ IN _ _ _ _ _ 11 staining staining VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 3783 # text = Untreated NS-Meg cells expressed mRNA for the Epo receptor (EpoR), for GATA-1, and for alpha 1, alpha 2 and gamma globin genes. 1 Untreated untreate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 NS N PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 Meg Meg PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 Epo Epo PROPN NNP Number=Sing _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 EpoR EpoR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 alpha alpha NOUN NN Number=Sing _ _ _ _ 27 2 2 NUM CD NumType=Card _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 gamma gamma NOUN NN Number=Sing _ _ _ _ 30 globin globin NOUN NN Number=Sing _ _ _ _ 31 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3784 # text = These results indicate that NS-Meg cells undergo terminal differentiation of both megakaryocytic and erythroid lineages. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 NS NS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 Meg Meg PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 undergo undergo VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 11 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 both both CCONJ CC _ _ _ _ _ 14 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 17 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3785 # text = This cell line should be a very useful tool for the investigation of both megakaryocytic and erythroid maturation. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 line line NOUN NN Number=Sing _ _ _ _ 4 should should AUX MD VerbForm=Fin _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 very very ADV RB _ _ _ _ _ 8 useful useful ADJ JJ Degree=Pos _ _ _ _ 9 tool tool NOUN NN Number=Sing _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 investigation investigation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 both both CCONJ CC _ _ _ _ _ 15 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 18 maturation maturation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3786 # text = Document 003003583 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003583 003003583 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3787 # text = Cytomegalovirus modulates interleukin-6 gene expression. 1 Cytomegalovirus Cytomegalovirus PROPN NNP Number=Sing _ _ _ _ 2 modulates modulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 6 6 NUM CD NumType=Card _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3788 # text = Complications after lung transplantation include the development of rejection and an increased incidence of infection, particularly with cytomegalovirus (CMV). 1 Complications complication NOUN NNS Number=Plur _ _ _ _ 2 after after ADP IN _ _ _ _ _ 3 lung lung NOUN NN Number=Sing _ _ _ _ 4 transplantation transplantation NOUN NN Number=Sing _ _ _ _ 5 include include VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 development development NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 rejection rejection NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 increased increased VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 incidence incidence NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 particularly particularly ADV RB _ _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 cytomegalovirus cytomegalovirus NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 CMV CMV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3789 # text = Several recent studies have suggested that interleukin (IL)-6 may be used to detect both infection and rejection after lung transplantation. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 recent recent ADJ JJ Degree=Pos _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 suggested suggest VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 - - SYM SYM _ _ _ _ SpaceAfter=No 12 6 6 NUM CD NumType=Card _ _ _ _ 13 may may AUX MD VerbForm=Fin _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 detect detect VERB VB VerbForm=Inf _ _ _ _ 18 both both CCONJ CC _ _ _ _ _ 19 infection infection NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 rejection rejection NOUN NN Number=Sing _ _ _ _ 22 after after ADP IN _ _ _ _ _ 23 lung lung NOUN NN Number=Sing _ _ _ _ 24 transplantation transplantation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3790 # text = In addition, IL-6 may play a role in the development of bronchiolitis obliterans after transplantation. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 6 6 NUM CD NumType=Card _ _ _ _ 7 may may AUX MD VerbForm=Fin _ _ _ _ 8 play play VERB VB VerbForm=Inf _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 role role NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 development development NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 bronchiolitis bronchiolitis NOUN NN Number=Sing _ _ _ _ 16 obliterans obliteran NOUN NNS Number=Plur _ _ _ _ 17 after after ADP IN _ _ _ _ _ 18 transplantation transplantation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3791 # text = Because CMV is also associated with the development of bronchiolitis obliterans after transplantation, we determined whether CMV induces IL-6 gene expression. 1 Because because SCONJ IN _ _ _ _ _ 2 CMV CMV PROPN NNP Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 development development NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 bronchiolitis bronchiolitis NOUN NN Number=Sing _ _ _ _ 11 obliterans obliteran NOUN NNS Number=Plur _ _ _ _ 12 after after ADP IN _ _ _ _ _ 13 transplantation transplantation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 16 determined determine VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 whether whether SCONJ IN _ _ _ _ _ 18 CMV CMV PROPN NNP Number=Sing _ _ _ _ 19 induces induce PROPN NNPS Number=Plur _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 6 6 NUM CD NumType=Card _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3792 # text = We demonstrated that CMV infection increased both IL-6 protein and mRNA in peripheral blood mononuclear cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 CMV CMV PROPN NNP Number=Sing _ _ _ _ 5 infection infection NOUN NN Number=Sing _ _ _ _ 6 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 both both CCONJ CC _ _ _ _ _ 8 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 6 6 NUM CD NumType=Card _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 16 blood blood NOUN NN Number=Sing _ _ _ _ 17 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3793 # text = We also demonstrated that the CMV immediate early 1 gene product increased expression of the IL-6 promoter. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 CMV Cmv NOUN NN Number=Sing _ _ _ _ 7 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 8 early early ADV RB Degree=Pos _ _ _ _ 9 1 1 NUM CD NumType=Card _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 product product NOUN NN Number=Sing _ _ _ _ 12 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 6 6 NUM CD NumType=Card _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3794 # text = This effect of the CMV immediate early 1 gene product was dependent upon the presence of specific transcription factor binding sites in the IL-6 promoter. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 CMV CMV PROPN NNP Number=Sing _ _ _ _ 6 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 7 early early ADJ JJ Degree=Pos _ _ _ _ 8 1 1 NUM CD NumType=Card _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 product product NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 13 upon upon ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 presence presence NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 binding bind VERB VBG VerbForm=Ger _ _ _ _ 21 sites site NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 6 6 NUM CD NumType=Card _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3795 # text = These studies demonstrate that CMV may be an important cofactor in the development of rejection and infection after transplantation through its effects on IL-6. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 CMV CMV PROPN NNP Number=Sing _ _ _ _ 6 may may AUX MD VerbForm=Fin _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 important important ADJ JJ Degree=Pos _ _ _ _ 10 cofactor cofactor NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 development development NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 rejection rejection NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 infection infection NOUN NN Number=Sing _ _ _ _ 18 after after ADP IN _ _ _ _ _ 19 transplantation transplantation NOUN NN Number=Sing _ _ _ _ 20 through through ADP IN _ _ _ _ _ 21 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 22 effects effect NOUN NNS Number=Plur _ _ _ _ 23 on on ADP IN _ _ _ _ _ 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3796 # text = Document 003003585 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003585 003003585 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3797 # text = Signal transduction pathways in normal human monocytes stimulated by cytokines and mediators: comparative study with normal human neutrophils or transformed cells and the putative roles in functionality and cell biology. 1 Signal signal ADJ JJ Degree=Pos _ _ _ _ 2 transduction transduction NOUN NN Number=Sing _ _ _ _ 3 pathways pathway NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 normal normal ADJ JJ Degree=Pos _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 8 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 mediators mediator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 : : PUNCT : _ _ _ _ _ 14 comparative comparative ADJ JJ Degree=Pos _ _ _ _ 15 study study NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 normal normal ADJ JJ Degree=Pos _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 putative putative ADJ JJ Degree=Pos _ _ _ _ 26 roles role NOUN NNS Number=Plur _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 functionality functionality NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 biology biology NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3798 # text = Granulocyte-macrophage colony-stimulating factor (GM-CSF) and interleukin (IL) -3 induced tyrosine phosphorylation of 92-kDa protein in normal human monocytes. 1 Granulocyte Granulocyte ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 4 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 -stimulating -stimulating VERB VBG VerbForm=Ger _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 3 3 X LS _ _ _ _ _ 19 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 21 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 92 92 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kDa kDa NOUN NN Number=Sing _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 normal normal ADJ JJ Degree=Pos _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3799 # text = We identified this 92-kDa protein as STAT5, but not as STATs1, 3, and 6 nor c-fes and vav protooncogene products, and demonstrated its translocation to the nucleus, enhancement of specific DNA binding capacity, and potentiation of trancriptional activity by GM-CSF. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 4 92 92 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kDa kDa NOUN NN Number=Sing _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 STAT5 STAT5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 not not ADV RB _ _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 STATs1 STATs1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 6 6 NUM CD NumType=Card _ _ _ _ 20 nor nor CCONJ CC _ _ _ _ _ 21 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 fes fe NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 vav vave NOUN NN Number=Sing _ _ _ _ 26 protooncogene protooncogene NOUN NN Number=Sing _ _ _ _ 27 products product NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 32 translocation translocation NOUN NN Number=Sing _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 specific specific ADJ JJ Degree=Pos _ _ _ _ 40 DNA dna NOUN NN Number=Sing _ _ _ _ 41 binding binding VERB VBG VerbForm=Ger _ _ _ _ 42 capacity capacity NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 potentiation potentiation NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 trancriptional trancriptional ADJ JJ Degree=Pos _ _ _ _ 48 activity activity NOUN NN Number=Sing _ _ _ _ 49 by by ADP IN _ _ _ _ _ 50 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 3800 # text = N-formyl-methionyl-leucyl-phenylalanine (FMLP) and phorbol myristate acetate (PMA) induced tyrosine phosphorylation of 42- and 44-kDa proteins, which were identified as extracellular signal-regulated kinase (ERK), in human monocytes. 1 N-formyl-methionyl-leucyl-phenylalanine N-formyl-methionyl-leucyl-phenylalanine PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 FMLP FMLP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 7 myristate myristate NOUN NN Number=Sing _ _ _ _ 8 acetate acetate NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 14 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 42 42 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 44 44 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kDa kDa NOUN NN Number=Sing _ _ _ _ 22 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 as as ADP IN _ _ _ _ _ 28 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 29 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 kinase kinase NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 ERK ERK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 human human ADJ JJ Degree=Pos _ _ _ _ 39 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 3801 # text = In marked contrast to neutrophils and MO7e cells, GM-CSF did not induce tyrosine phosphorylation and activation of ERK in monocytes. 1 In in ADP IN _ _ _ _ _ 2 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 contrast contrast NOUN NN Number=Sing _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 MO7e MO7e NOUN NN Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 CSF CSF PROPN NNP Number=Sing _ _ _ _ 13 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 induce induce VERB VB VerbForm=Inf _ _ _ _ 16 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 17 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 ERK ERK PROPN NNP Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 3802 # text = Among upstream signaling molecules of ERK, Shc was constitutively associated with Grb2 and was not tyrosine-phosphorylated by GM-CSF and FMLP, and Sos1 and c-Raf-1 were not phosphorylated by GM-CSF, IL-3, TNF, and FMLP in monocytes, whereas all these signaling molecules were affected and/or utilized by GM-CSF in MO7e cells. 1 Among among ADP IN _ _ _ _ _ 2 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 3 signaling signaling NOUN NN Number=Sing _ _ _ _ 4 molecules molecule NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 ERK ERK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 Shc Shc PROPN NNP Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 constitutively constitutively ADV RB _ _ _ _ _ 11 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 Grb2 Grb2 NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 tyrosine tyrosine NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 CSF CSF PROPN NNP Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 FMLP FMLP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 Sos1 Sos1 PROPN NNP Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 c- c- SYM NFP _ _ _ _ SpaceAfter=No 31 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 not not PART RB _ _ _ _ _ 36 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 by by ADP IN _ _ _ _ _ 38 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT , _ _ _ _ SpaceAfter=No 44 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 FMLP FMLP NOUN NN Number=Sing _ _ _ _ 50 in in ADP IN _ _ _ _ _ 51 monocytes monocytes NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 whereas whereas SCONJ IN _ _ _ _ _ 54 all all DET DT _ _ _ _ _ 55 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 56 signaling signaling NOUN NN Number=Sing _ _ _ _ 57 molecules molecule NOUN NNS Number=Plur _ _ _ _ 58 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 59 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 60 and and CCONJ CC _ _ _ _ SpaceAfter=No 61 / / PUNCT , _ _ _ _ SpaceAfter=No 62 or or CCONJ CC _ _ _ _ _ 63 utilized utilize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 64 by by ADP IN _ _ _ _ _ 65 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 66 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 67 CSF CSF PROPN NNP Number=Sing _ _ _ _ 68 in in ADP IN _ _ _ _ _ 69 MO7e MO7e PROPN NNP Number=Sing _ _ _ _ 70 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 71 . . PUNCT . _ _ _ _ _ # sent_id = 3803 # text = In contrast to neutrophils, p38 was constitutively phosphorylated and agonist-dependent phosphorylation and activation was not detected in human monocytes. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 p38 p38 NUM CD NumType=Card _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 constitutively constitutively ADV RB _ _ _ _ _ 9 phosphorylated phosphorylate ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 agonist agonist ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 14 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 not not PART RB _ _ _ _ _ 19 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3804 # text = Superoxide release stimulated by FMLP was inhibited partially by PD98059 or SB203580, a specific inhibitor of ERK or p38 pathway, and was almost completely inhibited by the combination of both inhibitors, whereas PMA-induced superoxide release was resistant to these two inhibitors in monocytes. 1 Superoxide Superoxide ADJ JJ Degree=Pos _ _ _ _ 2 release release NOUN NN Number=Sing _ _ _ _ 3 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 FMLP FMLP PROPN NNP Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 partially partially ADV RB _ _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 PD98059 PD98059 PROPN NNP Number=Sing _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 SB Sb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 203580 203580 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 ERK ERK PROPN NNP Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 p38 p38 NUM CD NumType=Card _ _ _ _ 22 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 26 almost almost ADV RB _ _ _ _ _ 27 completely completely ADV RB _ _ _ _ _ 28 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 combination combination NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 both both DET DT _ _ _ _ _ 34 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 whereas whereas SCONJ IN _ _ _ _ _ 37 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 -induced -induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 39 superoxide superoxide ADJ JJ Degree=Pos _ _ _ _ 40 release release NOUN NN Number=Sing _ _ _ _ 41 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 42 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 43 to to ADP IN _ _ _ _ _ 44 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 45 two two NUM CD NumType=Card _ _ _ _ 46 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 3805 # text = PD98059 inhibited GM-CSF-dependent proliferation of MO7e cells. 1 PD98059 Pd98059 NOUN NN Number=Sing _ _ _ _ 2 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 GM- GM- PUNCT , _ _ _ _ SpaceAfter=No 4 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 7 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 MO7e MO7e ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 3806 # text = Present results indicate trancriptional roles of STAT5 and functional roles of ERK and/or p38 in normal human monocytes stimulated by physiological receptor-mediated agonists GM-CSF and FMLP. 1 Present present ADJ JJ Degree=Pos _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 trancriptional trancriptional ADJ JJ Degree=Pos _ _ _ _ 5 roles role NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 STAT5 stat5 PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 functional functional ADJ JJ Degree=Pos _ _ _ _ 10 roles role NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 ERK ERK PROPN NNP Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 or or CCONJ CC _ _ _ _ _ 16 p38 p38 NUM CD NumType=Card _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 normal normal ADJ JJ Degree=Pos _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 21 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 physiological physiological ADJ JJ Degree=Pos _ _ _ _ 24 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 agonists agonist NOUN NNS Number=Plur _ _ _ _ 28 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 CSF CSF PROPN NNP Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 FMLP FMLP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3807 # text = Possible roles of ERK in proliferation of transformed cells were also suggested. 1 Possible possible ADJ JJ Degree=Pos _ _ _ _ 2 roles role NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 ERK ERK PROPN NNP Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 transformed transformed ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 also also ADV RB _ _ _ _ _ 12 suggested suggest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3808 # text = Document 003003587 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003587 003003587 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3809 # text = Elevated cyclic AMP inhibits NF-kappaB-mediated transcription in human monocytic cells and endothelial cells. 1 Elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 cyclic cyclic ADJ JJ Degree=Pos _ _ _ _ 3 AMP Amp NOUN NN Number=Sing _ _ _ _ 4 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 kappaB- kappaB- SYM SYM _ _ _ _ SpaceAfter=No 8 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3810 # text = The NF-kappaB/Rel family of transcription factors regulates the inducible expression of many genes in activated human monocytes and endothelial cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 6 Rel Rel PROPN NNP Number=Sing _ _ _ _ 7 family family NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ _ 11 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 many many ADJ JJ Degree=Pos _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3811 # text = In this study, we examined the molecular mechanism by which agents that elevate intracellular cAMP inhibit the expression of the tumor necrosis factor alpha (TNFalpha), tissue factor, endothelial leukocyte adhesion molecule-1, and vascular cell adhesion molecule-1 genes. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 9 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 which which DET WDT PronType=Int _ _ _ _ 12 agents agent NOUN NNS Number=Plur _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 elevate elevate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 16 cAMP camp NOUN NNS Number=Plur _ _ _ _ 17 inhibit inhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 tumor tumor NOUN NN Number=Sing _ _ _ _ 23 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 alpha alpha NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 tissue tissue ADP IN _ _ _ _ _ 31 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 34 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 35 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 36 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 42 cell cell NOUN NN Number=Sing _ _ _ _ 43 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 44 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 1 1 NUM CD NumType=Card _ _ _ _ 47 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 3812 # text = Both forskolin and dibutyryl cAMP, which elevate intracellular cAMP by independent mechanisms, inhibited TNFalpha and tissue factor expression at the level of transcription. 1 Both both DET DT _ _ _ _ _ 2 forskolin forskolin NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 dibutyryl dibutyryl NOUN NN Number=Sing _ _ _ _ 5 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 elevate elevate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 10 cAMP camp NOUN NNS Number=Plur _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 independent independent ADJ JJ Degree=Pos _ _ _ _ 13 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 tissue tissue ADJ JJ Degree=Pos _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 at at ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 level level NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3813 # text = Induction of NF-kappaB-dependent gene expression in transiently transfected human monocytic THP-1 cells and human umbilical vein endothelial cells was inhibited by elevated cAMP and by overexpression of the catalytic subunit of protein kinase A (PKA). 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF-kappaB Nf-kappab ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 transiently transiently ADV RB _ _ _ _ _ 10 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 13 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 20 vein vein NOUN NN Number=Sing _ _ _ _ 21 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 cAMP camp NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 catalytic catalytic ADJ JJ Degree=Pos _ _ _ _ 34 subunit subunit NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 protein protein NOUN NN Number=Sing _ _ _ _ 37 kinase kinase NOUN NN Number=Sing _ _ _ _ 38 A A PROPN NNP Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 PKA PKA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3814 # text = Elevated cAMP did not prevent nuclear translocation of p50/p65 and c-Rel/p65 heterodimers, decrease nuclear translocation of p65, or significantly modify TNFalpha-induced phosphorylation of p65. 1 Elevated elevated PROPN NNP Number=Sing _ _ _ _ 2 cAMP camp PROPN NNP Number=Sing _ _ _ _ 3 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 prevent prevent VERB VB VerbForm=Inf _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 translocation translocation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 p50/ p50/ SYM SYM _ _ _ _ SpaceAfter=No 10 p65 p65 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 c- c- SYM NFP _ _ _ _ SpaceAfter=No 13 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 p65 p65 NOUN NN Number=Sing _ _ _ _ 16 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 decrease decrease NOUN NN Number=Sing _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 translocation translocation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 significantly significantly ADV RB _ _ _ _ _ 26 modify modify VERB VB VerbForm=Inf _ _ _ _ 27 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3815 # text = Functional studies demonstrated that transcriptional activation of a plasmid containing multimerized kappaB sites by p65 was inhibited by agents that elevate cAMP and by overexpression of the catalytic subunit of PKA. 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 10 containing contain VERB VBG VerbForm=Ger _ _ _ _ 11 multimerized multimerize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 13 sites site NOUN NNS Number=Plur _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 p65 p65 NOUN NN Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 agents agent NOUN NNS Number=Plur _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 elevate elevate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 cAMP camp NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 catalytic catalytic ADJ JJ Degree=Pos _ _ _ _ 29 subunit subunit NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 PKA PKA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3816 # text = This study indicates that activation of PKA reduces the induction of a distinct set of genes in monocytes and endothelial cells by inhibiting NF-kappaB-mediated transcription. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 indicates indicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 PKA PKA PROPN NNP Number=Sing _ _ _ _ 8 reduces reduce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 14 set set NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 genes gene NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 by by SCONJ IN _ _ _ _ _ 23 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3817 # text = Document 003003588 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003588 003003588 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3818 # text = The Epstein-Barr virus (EBV) BMRF1 promoter for early antigen (EA-D) is regulated by the EBV transactivators, BRLF1 and BZLF1, in a cell-specific manner. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 Barr Barr PROPN NNP Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 BMRF1 BMRF1 NUM CD NumType=Card _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 early early ADJ JJ Degree=Pos _ _ _ _ 13 antigen antigen NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 EA Ea PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 D d PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 EBV EBV PROPN NNP Number=Sing _ _ _ _ 24 transactivators transactivator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 BRLF1 BRLF1 PROPN NNP Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 BZLF1 BZLF1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 specific specific ADJ JJ Degree=Pos _ _ _ _ 35 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3819 # text = The Epstein-Barr virus early antigen diffuse component (EA-D) is essential for Epstein-Barr virus DNA polymerase activity, and its activity is suppressed during latent infection. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 Barr Barr PROPN NNP Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 early early ADJ JJ Degree=Pos _ _ _ _ 7 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 8 diffuse diffuse NOUN NN Number=Sing _ _ _ _ 9 component component NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 EA Ea PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 D d PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 essential essential ADJ JJ Degree=Pos _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 Barr Barr PROPN NNP Number=Sing _ _ _ _ 21 virus virus NOUN NN Number=Sing _ _ _ _ 22 DNA dna NOUN NN Number=Sing _ _ _ _ 23 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 28 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 activity activity NOUN NN Number=Sing _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 during during ADP IN _ _ _ _ _ 33 latent latent ADJ JJ Degree=Pos _ _ _ _ 34 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 3820 # text = We investigated the regulation of the promoter (BMRF1) for this early gene by studying its responsiveness in vitro to two immediate-early viral transactivators, BZLF1 (Z) and BRLF1 (R), focusing on the differences in response in lymphoid cells and epithelial cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 promoter promoter NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 BMRF1 BMRF1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 13 early early ADJ JJ Degree=Pos _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 by by SCONJ IN _ _ _ _ _ 16 studying study VERB VBG VerbForm=Ger _ _ _ _ 17 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 vitro vitro NUM CD NumType=Card _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 two two NUM CD NumType=Card _ _ _ _ 23 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 early early ADJ JJ Degree=Pos _ _ _ _ 26 viral viral ADJ JJ Degree=Pos _ _ _ _ 27 transactivators transactivator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 BZLF BZLF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 Z Z PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 BRLF1 BRLF1 PROPN NNP Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 R R PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 focusing focus VERB VBG VerbForm=Ger _ _ _ _ 41 on on ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 differences difference NOUN NNS Number=Plur _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 response response NOUN NN Number=Sing _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 48 cells cell NOUN NNS Number=Plur _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 51 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 3821 # text = In lymphoid cells, Z or R alone produced only small increases in EA-D promoter activity, whereas both transactivators together produced a large stimulatory effect. 1 In in ADP IN _ _ _ _ _ 2 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 Z Z PROPN NNP Number=Sing _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 R be PROPN NNP Number=Sing _ _ _ _ 8 alone alone ADV RB _ _ _ _ _ 9 produced produce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 only only ADV RB _ _ _ _ _ 11 small small ADJ JJ Degree=Pos _ _ _ _ 12 increases increase NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 EA EA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 D D PROPN NNP Number=Sing _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 whereas whereas SCONJ IN _ _ _ _ _ 21 both both DET DT _ _ _ _ _ 22 transactivators transactivator NOUN NNS Number=Plur _ _ _ _ 23 together together ADV RB _ _ _ _ _ 24 produced produce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 large large ADJ JJ Degree=Pos _ _ _ _ 27 stimulatory stimulatory ADJ JJ Degree=Pos _ _ _ _ 28 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3822 # text = In epithelial cells, the Z transactivator alone produced maximal stimulation of the EA-D promoter; the effect of R and Z together was no greater than that of Z alone. 1 In in ADP IN _ _ _ _ _ 2 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 Z Z PROPN NNP Number=Sing _ _ _ _ 7 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 8 alone alone ADV RB _ _ _ _ _ 9 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 11 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 EA EA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 D D PROPN NNP Number=Sing _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ; ; PUNCT , _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 effect effect NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 R R PROPN NNP Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 Z Z PROPN NNP Number=Sing _ _ _ _ 25 together together ADV RB _ _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 no no ADV RB _ _ _ _ _ 28 greater greater ADJ JJR Degree=Cmp _ _ _ _ 29 than than ADP IN _ _ _ _ _ 30 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 Z Z PROPN NNP Number=Sing _ _ _ _ 33 alone alone ADV RB _ _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 3823 # text = Deletional analysis and site-directed mutagenesis of the EA-D promoter demonstrated that in epithelial cells the potential AP-1 binding site plays an essential role in Z responsiveness, although sequences further upstream are also important. 1 Deletional Deletional ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 EA Ea PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 D d PROPN NNP Number=Sing _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 potential potential ADJ JJ Degree=Pos _ _ _ _ 21 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 binding binding VERB VBG VerbForm=Ger _ _ _ _ 25 site site NOUN NN Number=Sing _ _ _ _ 26 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 essential essential ADJ JJ Degree=Pos _ _ _ _ 29 role role NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 Z Z PROPN NNP Number=Sing _ _ _ _ 32 responsiveness responsiveness NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 although although SCONJ IN _ _ _ _ _ 35 sequences sequence NOUN NNS Number=Plur _ _ _ _ 36 further further ADV RB _ _ _ _ _ 37 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 38 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 39 also also ADV RB _ _ _ _ _ 40 important important ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 3824 # text = In lymphoid cells, only the upstream sequences are required for transactivation by the Z/R combination, and the AP-1 site is dispensable. 1 In in ADP IN _ _ _ _ _ 2 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 only only ADV RB _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 8 sequences sequence NOUN NNS Number=Plur _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 Z/R Z/R PROPN NNP Number=Sing _ _ _ _ 16 combination combination NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 site site NOUN NN Number=Sing _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 dispensable dispensable ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3825 # text = These data suggest that EA-D (BMRF1) promoter regulation by Z and R is cell type specific and appears to involve different mechanisms in each cell type. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 EA Ea PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 D d PROPN NNP Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 BMRF1 BMRF1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 regulation regulation NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 Z Z PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 R R PROPN NNP Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 type type NOUN NN Number=Sing _ _ _ _ 20 specific specific ADJ JJ Degree=Pos _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 involve involve VERB VB VerbForm=Inf _ _ _ _ 25 different different ADJ JJ Degree=Pos _ _ _ _ 26 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 each each DET DT _ _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3826 # text = Document 003003589 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003589 003003589 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3827 # text = Bcl-6 expression in reactive follicular hyperplasia, follicular lymphoma, and angioimmunoblastic T-cell lymphoma with hyperplastic germinal centers: heterogeneity of intrafollicular T-cells and their altered distribution in the pathogenesis of angioimmunoblastic T-cell lymphoma. 1 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -6 -6 NUM CD NumType=Card _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 6 follicular follicular ADJ JJ Degree=Pos _ _ _ _ 7 hyperplasia hyperplasia NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 follicular follicular ADJ JJ Degree=Pos _ _ _ _ 10 lymphoma lymphoma NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 angioimmunoblastic angioimmunoblastic ADJ JJ Degree=Pos _ _ _ _ 14 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 hyperplastic hyperplastic ADJ JJ Degree=Pos _ _ _ _ 19 germinal germinal ADJ JJ Degree=Pos _ _ _ _ 20 centers center NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 : : PUNCT : _ _ _ _ _ 22 heterogeneity heterogeneity NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 intrafollicular intrafollicular ADJ JJ Degree=Pos _ _ _ _ 25 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 29 altered alter VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 distribution distribution NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 angioimmunoblastic angioimmunoblastic ADJ JJ Degree=Pos _ _ _ _ 36 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 lymphoma lymphoma NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3828 # text = BACKGROUND: The Bcl-6 gene product, a nuclear phosphoprotein, is expressed independently of Bcl-6 gene rearrangement. 1 BACKGROUND background ADP IN _ _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 The the DET DT Definite=Def|PronType=Art _ _ _ _ 4 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 6 6 NUM CD NumType=Card _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 product product NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 phosphoprotein phosphoprotein NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 independently independently ADV RB _ _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 6 6 NUM CD NumType=Card _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 rearrangement rearrangement NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3829 # text = In lymph nodes, expression of Bcl-6 protein is restricted to germinal center (GC) B-cells and 10% to 15% of CD3/CD4+ intrafollicular 1 In in ADP IN _ _ _ _ _ 2 lymph lymph ADJ JJ Degree=Pos _ _ _ _ 3 nodes node NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 6 6 NUM CD NumType=Card _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 restricted restrict VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 germinal germinal VERB VB VerbForm=Inf _ _ _ _ 15 center center NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 GC GC NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 % % SYM NN Number=Sing _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 15 15 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 % % SYM NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 CD3/CD4 CD3/CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 + + SYM SYM _ _ _ _ _ 31 intrafollicular intrafollicular ADJ JJ Degree=Pos _ _ _ _ # sent_id = 3830 # text = T cells. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 . . PUNCT . _ _ _ _ _ # sent_id = 3831 # text = Interfollicular cells are negative for Bcl-6 protein, except for rare CD3+/CD4+ T cells. 1 Interfollicular Interfollicular ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 negative negative ADJ JJ Degree=Pos _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 6 6 NUM CD NumType=Card _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 except except ADP IN _ _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 rare rare ADJ JJ Degree=Pos _ _ _ _ 14 CD3+/CD4 CD3+/CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 + + SYM SYM _ _ _ _ _ 16 T t NUM CD NumType=Card _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3832 # text = Recently, we reported cases of angioimmunoblastic T-cell lymphoma (AITL) with hyperplastic GCs (AITL/GC), and observed that borders of enlarged GCs were ill defined, with features suggestive of an outward migration of GC cells to surrounding interfollicular zones. 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 cases casis NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 angioimmunoblastic angioimmunoblastic ADJ JJ Degree=Pos _ _ _ _ 8 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 AITL AITL INTJ UH _ _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 hyperplastic hyperplastic ADJ JJ Degree=Pos _ _ _ _ 16 GCs GC NOUN NNS Number=Plur _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 AITL/ AITL/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 GC GC NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 borders border NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 enlarged enlarge ADJ JJ Degree=Pos _ _ _ _ 28 GCs Gcs NOUN NNS Number=Plur _ _ _ _ 29 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 ill ill ADV RB _ _ _ _ _ 31 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 with with SCONJ IN _ _ _ _ _ 34 features feature NOUN NNS Number=Plur _ _ _ _ 35 suggestive suggestive VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 outward outward ADJ JJ Degree=Pos _ _ _ _ 39 migration migration NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 GC Gc PROPN NNP Number=Sing _ _ _ _ 42 cells cell NOUN NNS Number=Plur _ _ _ _ 43 to to SCONJ IN _ _ _ _ _ 44 surrounding surround VERB VBG VerbForm=Ger _ _ _ _ 45 interfollicular interfollicular ADJ JJ Degree=Pos _ _ _ _ 46 zones zone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 3833 # text = This prompted a study of follicular borders with Bcl-6 staining in reactive follicular hyperplasias and follicular lymphomas to compare with AITL/GC. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 prompted prompt VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 follicular follicular ADJ JJ Degree=Pos _ _ _ _ 7 borders border NOUN NNS Number=Plur _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 6 6 NUM CD NumType=Card _ _ _ _ 12 staining staining VERB VBG VerbForm=Ger _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 15 follicular follicular ADJ JJ Degree=Pos _ _ _ _ 16 hyperplasias hyperplasia NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 follicular follicular ADJ JJ Degree=Pos _ _ _ _ 19 lymphomas lymphoma NOUN NNS Number=Plur _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 compare compare VERB VB VerbForm=Inf _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 AITL AITL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 / / PUNCT , _ _ _ _ SpaceAfter=No 25 GC GC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3834 # text = MATERIALS AND METHODS: Formalin-fixed paraffin sections were used for immunostaining of Bcl-6. 1 MATERIALS material NOUN NNS Number=Plur _ _ _ _ 2 AND and CCONJ CC _ _ _ _ _ 3 METHODS method NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ 5 Formalin Formalin ADP IN _ _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 fixed fix VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 paraffin paraffin NOUN NN Number=Sing _ _ _ _ 9 sections section NOUN NNS Number=Plur _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 for for SCONJ IN _ _ _ _ _ 13 immunostaining immunostaining VERB VBG VerbForm=Ger _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3835 # text = Six cases of AITL/GC, 12 nonspecific reactive follicular hyperplasia (FH), 7 HIV adenopathy, 10 follicular lymphoma (FL), and 8 typical AITL (ie, AITL without GC) were studied. 1 Six six NUM CD NumType=Card _ _ _ _ 2 cases case NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 AITL/GC AITL/GC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 12 12 NUM CD NumType=Card _ _ _ _ 7 nonspecific nonspecific ADJ JJ Degree=Pos _ _ _ _ 8 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 9 follicular follicular ADJ JJ Degree=Pos _ _ _ _ 10 hyperplasia hyperplasia NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 FH FH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 7 7 NUM CD NumType=Card _ _ _ _ 16 HIV Hiv NOUN NN Number=Sing _ _ _ _ 17 adenopathy adenopathy NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 10 10 NUM CD NumType=Card _ _ _ _ 20 follicular follicular ADJ JJ Degree=Pos _ _ _ _ 21 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 FL FL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 8 8 NUM CD NumType=Card _ _ _ _ 28 typical typical ADJ JJ Degree=Pos _ _ _ _ 29 AITL Aitl NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 ie ie X FW _ _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 AITL AITL ADV RB _ _ _ _ _ 34 without without ADP IN _ _ _ _ _ 35 GC GC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 38 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 3836 # text = Double staining for Bcl-6/CD20, Bcl-6/CD3, and Bcl-6/CD57 was performed in selected cases. 1 Double double ADJ JJ Degree=Pos _ _ _ _ 2 staining stai VERB VBG VerbForm=Ger _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 Bcl-6/CD20 Bcl-6/CD20 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 Bcl-6/CD3 Bcl-6/CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 Bcl-6/CD57 Bcl-6/CD57 NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 performed perform VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 selected select VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 cases casis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3837 # text = RESULTS: In FH and HIV adenopathy, staining for Bcl-6 revealed densely populated GCs with well-defined and regular GC borders, whereas Bcl-6+ cells were rare in the interfollicular areas. 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 In in ADP IN _ _ _ _ _ 4 FH FH PROPN NNP Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 HIV HIV PROPN NNP Number=Sing _ _ _ _ 7 adenopathy adenopathy NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 staining stain VERB VBG VerbForm=Ger _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 6 6 NUM CD NumType=Card _ _ _ _ 14 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 densely densely ADV RB _ _ _ _ _ 16 populated populate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 GCs GC NOUN NNS Number=Plur _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 well well ADV RB Degree=Pos _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 defined define VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 regular regular ADJ JJ Degree=Pos _ _ _ _ 24 GC Gc NOUN NN Number=Sing _ _ _ _ 25 borders border NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 whereas whereas SCONJ IN _ _ _ _ _ 28 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - SYM SYM _ _ _ _ SpaceAfter=No 30 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 + + SYM SYM _ _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 rare rare ADJ JJ Degree=Pos _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 interfollicular interfollicular ADJ JJ Degree=Pos _ _ _ _ 38 areas area NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 3838 # text = An occasional GC with an ill-defined border was invariably surrounded by a broad mantle zone; those with indistinct mantle zones had well-defined, regular borders. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 occasional occasional ADJ JJ Degree=Pos _ _ _ _ 3 GC Gc NOUN NN Number=Sing _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 ill ill ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 border border NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 invariably invariably ADV RB _ _ _ _ _ 12 surrounded surround VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 broad broad ADJ JJ Degree=Pos _ _ _ _ 16 mantle mantle NOUN NN Number=Sing _ _ _ _ 17 zone zone NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ; ; PUNCT , _ _ _ _ _ 19 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 indistinct indistinct ADJ JJ Degree=Pos _ _ _ _ 22 mantle mantle NOUN NN Number=Sing _ _ _ _ 23 zones zone NOUN NNS Number=Plur _ _ _ _ 24 had have VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 well well ADV RB Degree=Pos _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 defined define VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 regular regular ADJ JJ Degree=Pos _ _ _ _ 30 borders border NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3839 # text = In FL, follicles were densely populated, and their borders were irregular, with some Bcl-6+ cells in the interfollicular zones. 1 In in ADP IN _ _ _ _ _ 2 FL FL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 follicles follicle NOUN NNS Number=Plur _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 densely densely ADV RB _ _ _ _ _ 7 populated populate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 11 borders border NOUN NNS Number=Plur _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 irregular irregular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 some some DET DT _ _ _ _ _ 17 Bcl Bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 + + SYM SYM _ _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 interfollicular interfollicular ADJ JJ Degree=Pos _ _ _ _ 25 zones zone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3840 # text = In AITL/GC, GCs were less dense, GC borders were ill defined and irregular, and the number of interfollicular Bcl-6+ cells was markedly increased. 1 In in ADP IN _ _ _ _ _ 2 AITL/GC AITL/GC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 GCs Gcs PROPN NNP Number=Sing _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 less less ADV RBR Degree=Cmp _ _ _ _ 7 dense dense ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 GC Gc ADJ JJ Degree=Pos _ _ _ _ 10 borders border NOUN NNS Number=Plur _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 ill ill AUX MD VerbForm=Fin _ _ _ _ 13 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 irregular irregular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 number number NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 interfollicular interfollicular ADJ JJ Degree=Pos _ _ _ _ 22 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - SYM SYM _ _ _ _ SpaceAfter=No 24 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 + + SYM SYM _ _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 28 markedly markedly ADV RB _ _ _ _ _ 29 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3841 # text = Double staining revealed that these interfollicular Bcl-6+ cells in AITL/GC were Bcl6+/CD3+/CD20-/CD57- 1 Double double ADJ JJ Degree=Pos _ _ _ _ 2 staining stai NOUN NN Number=Sing _ _ _ _ 3 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 interfollicular interfollicular ADJ JJ Degree=Pos _ _ _ _ 7 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - SYM SYM _ _ _ _ SpaceAfter=No 9 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 + + SYM SYM _ _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 AITL/ AITLith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 14 GC GC PROPN NNP Number=Sing _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 Bcl6+/CD3+/CD20-/CD57- Bcl6+/CD3+/CD20-/CD57- SYM NFP _ _ _ _ _ # sent_id = 3842 # text = T cells. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 . . PUNCT . _ _ _ _ _ # sent_id = 3843 # text = Moreover, CD3+ intrafollicular 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 CD3 CD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 + + SYM SYM _ _ _ _ _ 5 intrafollicular intrafollicular ADJ JJ Degree=Pos _ _ _ _ # sent_id = 3844 # text = T cells were depleted in AITL/GC, whereas they were abundant in FH. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 depleted deplet VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 AITL/GC AITL/GC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 whereas whereas SCONJ IN _ _ _ _ _ 9 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 abundant abundant ADV RB _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 FH FH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 3845 # text = Intrafollicular CD57+ cells did not stain for Bcl-6, and were also depleted in AITL/GC. 1 Intrafollicular Intrafollicular ADJ JJ Degree=Pos _ _ _ _ 2 CD57 CD57 NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 + + SYM SYM _ _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 stain stain VERB VB VerbForm=Inf _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 -6 -6 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 depleted deplet VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 AITL AITL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 /GC /GC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3846 # text = In typical AITL, some neoplastic cells were positive for Bcl-6, showing variable degrees of staining. 1 In in ADP IN _ _ _ _ _ 2 typical typical ADJ JJ Degree=Pos _ _ _ _ 3 AITL Aitl NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 some some DET DT _ _ _ _ _ 6 neoplastic neoplastic ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 positive positive ADJ JJ Degree=Pos _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 -6 -6 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 showing show VERB VBG VerbForm=Ger _ _ _ _ 15 variable variable ADJ JJ Degree=Pos _ _ _ _ 16 degrees degree NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 staining staining NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 3847 # text = CONCLUSIONS: (1) GCs of AITL/GC differed from those of other reactive follicular hyperplasias and follicular lymphomas, and staining for Bcl-6 was useful to discern them. 1 CONCLUSIONS conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 1 1 X LS _ _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 GCs Gcs NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 AITL AITL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 / / PUNCT , _ _ _ _ SpaceAfter=No 10 GC GC PROPN NNP Number=Sing _ _ _ _ 11 differed differ VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 other other ADJ JJ Degree=Pos _ _ _ _ 16 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 17 follicular follicular ADJ JJ Degree=Pos _ _ _ _ 18 hyperplasias hyperplasia NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 follicular follicular ADJ JJ Degree=Pos _ _ _ _ 21 lymphomas lymphoma NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 staining stai VERB VBG VerbForm=Ger _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 6 6 NUM CD NumType=Card _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 useful useful ADJ JJ Degree=Pos _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 discern discern VERB VB VerbForm=Inf _ _ _ _ 33 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 3848 # text = (2) 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 2 2 X LS _ _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ # sent_id = 3849 # text = Intrafollicular CD3+ T cells, many of which were also positive for Bcl-6, were markedly depleted in AITL/GC, with increased interfollicular Bcl-6+/CD3+ cells, suggesting an outward migration of intrafollicular 1 Intrafollicular Intrafollicular ADJ JJ Degree=Pos _ _ _ _ 2 CD3 CD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 + + SYM SYM _ _ _ _ _ 4 T t NUM CD NumType=Card _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 many many ADJ JJ Degree=Pos _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 which which PRON WDT PronType=Int _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 also also ADV RB _ _ _ _ _ 12 positive positive ADJ JJ Degree=Pos _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 -6 -6 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 markedly markedly ADV RB _ _ _ _ _ 19 depleted deplet VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 AITL AITL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 / / PUNCT , _ _ _ _ SpaceAfter=No 23 GC GC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 interfollicular interfollicular ADJ JJ Degree=Pos _ _ _ _ 28 Bcl-6+/CD3 Bcl-6+/CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 + + SYM SYM _ _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 33 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 outward outward ADJ JJ Degree=Pos _ _ _ _ 35 migration migration NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 intrafollicular intrafollicular ADJ JJ Degree=Pos _ _ _ _ # sent_id = 3850 # text = T cells in this condition. 1 T t ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 condition condition NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 . . PUNCT . _ _ _ _ _ # sent_id = 3851 # text = (3) Interfollicular Bcl-6+/CD3+ cells in AITL/GC were too numerous to be accounted for by migration alone, suggesting local proliferation. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 3 3 X LS _ _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 Interfollicular Interfollicular ADJ JJ Degree=Pos _ _ _ _ 5 Bcl-6+/CD3 Bcl-6+/CD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 + + SYM SYM _ _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 AITL AITL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 GC GC PROPN NNP Number=Sing _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 too too ADV RB _ _ _ _ _ 14 numerous numerous ADJ JJ Degree=Pos _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 be be AUX VB VerbForm=Inf _ _ _ _ 17 accounted account VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 migration migration NOUN NN Number=Sing _ _ _ _ 21 alone alone ADV RB _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 24 local local ADJ JJ Degree=Pos _ _ _ _ 25 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3852 # text = (4) Intrafollicular CD57+ cells were negative for Bcl-6, indicating heterogeneity of the intrafollicular T-cell population. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 4 4 X LS _ _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 Intrafollicular Intrafollicular ADJ JJ Degree=Pos _ _ _ _ 5 CD57 CD57 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 + + SYM SYM _ _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 negative negative ADJ JJ Degree=Pos _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 -6 -6 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 15 heterogeneity heterogeneity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 intrafollicular intrafollicular ADJ JJ Degree=Pos _ _ _ _ 19 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 population population NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3853 # text = (5) Some neoplastic cells in AITL stained for Bcl-6, suggesting up-regulation of Bcl-6 expression in this tumor. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 5 5 X LS _ _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 Some some DET DT _ _ _ _ _ 5 neoplastic neoplastic ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 AITL AITL PROPN NNP Number=Sing _ _ _ _ 9 stained stain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 -6 -6 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 15 up up ADV RB _ _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 regulation regulation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 6 6 NUM CD NumType=Card _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 25 tumor. tumor. NOUN NN Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3854 # text = Document 003003593 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003593 003003593 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3855 # text = Staphylococcal enterotoxins modulate interleukin 2 receptor expression and ligand-induced tyrosine phosphorylation of the Janus protein-tyrosine kinase 3 (Jak3) and signal transducers and activators of transcription 1 Staphylococcal Staphylococcal ADJ JJ Degree=Pos _ _ _ _ 2 enterotoxins enterotoxin NOUN NNS Number=Plur _ _ _ _ 3 modulate modulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 interleukin interleukin ADJ JJ Degree=Pos _ _ _ _ 5 2 2 NUM CD NumType=Card _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 13 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 Janus Janus PROPN NNP Number=Sing _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 20 kinase kinase NOUN NN Number=Sing _ _ _ _ 21 3 3 NUM CD NumType=Card _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 Jak3 Jak3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 signal signal ADJ JJ Degree=Pos _ _ _ _ 27 transducers transducer NOUN NNS Number=Plur _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 activators activator NOUN NNS Number=Plur _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ _ # sent_id = 3856 # text = (Stat proteins). 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 Stat Stat VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 3 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 5 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3857 # text = Staphylococcal enterotoxins (SE) stimulate T cells expressing the appropriate variable region beta chain of (V beta) T-cell receptors and have been implicated in the pathogenesis of several autoimmune diseases. 1 Staphylococcal Staphylococcal ADJ JJ Degree=Pos _ _ _ _ 2 enterotoxins enterotoxin NOUN NNS Number=Plur _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 SE SE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 appropriate appropriate ADJ JJ Degree=Pos _ _ _ _ 12 variable variable ADJ JJ Degree=Pos _ _ _ _ 13 region region NOUN NN Number=Sing _ _ _ _ 14 beta beta NOUN NN Number=Sing _ _ _ _ 15 chain chain NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 V V PROPN NNP Number=Sing _ _ _ _ 19 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 receptors receptor NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 27 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 several several ADJ JJ Degree=Pos _ _ _ _ 33 autoimmune autoimmune NOUN NN Number=Sing _ _ _ _ 34 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 3858 # text = Depending on costimulatory signals, SE induce either proliferation or anergy in T cells. 1 Depending depend VERB VBG VerbForm=Ger _ _ _ _ 2 on on ADP IN _ _ _ _ _ 3 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 4 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 SE Se PROPN NNP Number=Sing _ _ _ _ 7 induce induce NOUN NN Number=Sing _ _ _ _ 8 either either CCONJ CC _ _ _ _ _ 9 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 anergy anergy NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3859 # text = In addition, SE can induce an interleukin-2 (IL-2) nonresponsive state and apoptosis. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 SE SE PROPN NNP Number=Sing _ _ _ _ 5 can can AUX MD VerbForm=Fin _ _ _ _ 6 induce induce VERB VB VerbForm=Inf _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 X LS _ _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 nonresponsive nonresponsive ADJ JJ Degree=Pos _ _ _ _ 17 state state NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3860 # text = Here, we show that SE induce dynamic changes in the expression of and signal transduction through the IL-2 receptor (IL-2R) beta and gamma chains (IL-2R beta and IL-2R gamma) in human antigen-specific CD4+ T-cell lines. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 SE SE PROPN NNP Number=Sing _ _ _ _ 7 induce induce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 dynamic dynamic ADJ JJ Degree=Pos _ _ _ _ 9 changes change NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 signal signal NOUN NN Number=Sing _ _ _ _ 16 transduction transduction NOUN NN Number=Sing _ _ _ _ 17 through through ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ _ 22 receptor receptor NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2R 2r NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 beta beta NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 gamma gamma NOUN NN Number=Sing _ _ _ _ 31 chains chain NOUN NNS Number=Plur _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 2R 2r NOUN NN Number=Sing _ _ _ _ 36 beta beta NOUN NN Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 2R 2r NOUN NN Number=Sing _ _ _ _ 41 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 human human ADJ JJ Degree=Pos _ _ _ _ 45 antigen antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 47 CD4 Cd4 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 + + SYM SYM _ _ _ _ _ 49 T- t- SYM SYM _ _ _ _ SpaceAfter=No 50 cell cell NOUN NN Number=Sing _ _ _ _ 51 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 3861 # text = Thus, after 4 hr of exposure to SEA and SEB, the expression of IL-2R beta was down-regulated, IL-2R gamma was slightly up-regulated, while IL-2R alpha remained largely unaffected. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 after after ADP IN _ _ _ _ _ 4 4 4 NUM CD NumType=Card _ _ _ _ 5 hr hr NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 exposure exposure NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 SEA sea NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 SEB SEB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2R 2R PROPN NNP Number=Sing _ _ _ _ 19 beta beta PROPN NNP Number=Sing _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 down down ADV RB _ _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 R r PROPN NNP Number=Sing _ _ _ _ 29 gamma gamma PROPN NNP Number=Sing _ _ _ _ 30 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 31 slightly slightly ADV RB _ _ _ _ _ 32 up up ADV RB _ _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 while while SCONJ IN _ _ _ _ _ 37 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 2R 2R PROPN NNP Number=Sing _ _ _ _ 40 alpha alpha NOUN NN Number=Sing _ _ _ _ 41 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 42 largely largely ADV RB _ _ _ _ _ 43 unaffected unaffected ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 3862 # text = The changes in the composition of IL-2Rs were accompanied by inhibition of IL-2-induced tyrosine phosphorylation of the Janus protein-tyrosine kinase 3 (Jak3) and signal transducers and activators of transcription called Stat3 and Stat5. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 changes change NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 composition composition NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 Rs R NOUN NNS Number=Plur _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 22 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 Janus Janus PROPN NNP Number=Sing _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 29 kinase kinase NOUN NN Number=Sing _ _ _ _ 30 3 3 NUM CD NumType=Card _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 Jak3 Jak3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 signal signal ADJ JJ Degree=Pos _ _ _ _ 36 transducers transducer NOUN NNS Number=Plur _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 activators activator NOUN NNS Number=Plur _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 transcription transcription NOUN NN Number=Sing _ _ _ _ 41 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 Stat3 Stat3 NUM CD NumType=Card _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 Stat5 stat5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 3863 # text = In parallel experiments, IL-2-driven proliferation was inhibited significantly. 1 In in ADP IN _ _ _ _ _ 2 parallel parallel ADJ JJ Degree=Pos _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 driven driven VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 significantly significantly ADV RB _ _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 3864 # text = After 16 hr of exposure to SE, the expression of IL-2R beta remained low, while that of IL2R alpha and IL2R gamma was further up-regulated, and ligand-induced tyrosine phosphorylation of Jak3 and Stat proteins was partly normalized. 1 After after ADP IN _ _ _ _ _ 2 16 16 NUM CD NumType=Card _ _ _ _ 3 hr hr NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 exposure exposure NOUN NN Number=Sing _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 SE SE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2R 2R PROPN NNP Number=Sing _ _ _ _ 15 beta beta NOUN NN Number=Sing _ _ _ _ 16 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 low low ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 while while SCONJ IN _ _ _ _ _ 20 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 IL2R IL2R PROPN NNP Number=Sing _ _ _ _ 23 alpha alpha PROPN NNP Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 IL2R IL2R PROPN NNP Number=Sing _ _ _ _ 26 gamma gamma PROPN NNP Number=Sing _ _ _ _ 27 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 28 further further ADV RB _ _ _ _ _ 29 up up ADV RB _ _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 38 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 Jak3 Jak3 NOUN NN Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 Stat Stat NOUN NN Number=Sing _ _ _ _ 43 proteins protein NOUN NNS Number=Plur _ _ _ _ 44 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 45 partly partly ADV RB _ _ _ _ _ 46 normalized normalize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 3865 # text = Yet, IL-2-driven proliferation remained profoundly inhibited, suggesting that signaling events other than Jak3/Stat activation had also been changed following SE stimulation. 1 Yet yet CCONJ CC _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 driven driven VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 9 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 profoundly profoundly ADV RB _ _ _ _ _ 11 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 16 events event NOUN NNS Number=Plur _ _ _ _ 17 other other ADJ JJ Degree=Pos _ _ _ _ 18 than than ADP IN _ _ _ _ _ 19 Jak3 Jak3 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 Stat Stat PROPN NNP Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ _ 23 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 also also ADV RB _ _ _ _ _ 25 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 26 changed change VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 following follow VERB VBG VerbForm=Ger _ _ _ _ 28 SE Se ADJ JJ Degree=Pos _ _ _ _ 29 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3866 # text = In conclusion, our data suggest that SE can modulate IL-2R expression and signal transduction involving the Jak/Stat pathway in CD4+ T-cell lines. 1 In in ADP IN _ _ _ _ _ 2 conclusion conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 5 data data NOUN NN Number=Sing _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 SE SE PROPN NNP Number=Sing _ _ _ _ 9 can can AUX MD VerbForm=Fin _ _ _ _ 10 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 11 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2R 2r PROPN NNP Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 signal signal NOUN NN Number=Sing _ _ _ _ 17 transduction transduction NOUN NN Number=Sing _ _ _ _ 18 involving involve VERB VBG VerbForm=Ger _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 Jak Jak PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 Stat Stat PROPN NNP Number=Sing _ _ _ _ 23 pathway pathway NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 + + SYM SYM _ _ _ _ _ 27 T- T- SYM NFP _ _ _ _ SpaceAfter=No 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3867 # text = Document 003003595 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003595 003003595 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3868 # text = The 56-59-kilodalton protein identified in untransformed steroid receptor complexes is a unique protein that exists in cytosol in a complex with both the 70- and 90-kilodalton heat shock proteins. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 56 56 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - SYM SYM _ _ _ _ SpaceAfter=No 4 59 59 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 -kilodalton -kilodalton NUM CD NumType=Card _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 untransformed untransformed ADJ JJ Degree=Pos _ _ _ _ 10 steroid steroid ADJ JJ Degree=Pos _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 complexes complex NOUN NNS Number=Plur _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 unique unique ADJ JJ Degree=Pos _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 exists exist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 complex complex NOUN NN Number=Sing _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 both both CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 70 70 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 90 90 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kilodalton kilodalton NOUN NN Number=Sing _ _ _ _ 33 heat heat NOUN NN Number=Sing _ _ _ _ 34 shock shock NOUN NN Number=Sing _ _ _ _ 35 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3869 # text = It has previously been shown that 9S, untransformed progestin, estrogen, androgen, and glucocorticoid receptor complexes in rabbit uterine and liver cytosols contain a 59-kDa protein [Tai, P.K., Maeda, Y., Nakao, K., Wakim, N.G., Duhring, J.L., & Faber, L.E.(1986) Biochemistry 25, 5269-5275]. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 S s NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 untransformed untransformed ADJ JJ Degree=Pos _ _ _ _ 11 progestin progestin NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 estrogen estrogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 androgen androgen NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 glucocorticoid glucocorticoid VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 receptor receptor NOUN NN Number=Sing _ _ _ _ 20 complexes complex NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 rabbit rabbit NOUN NN Number=Sing _ _ _ _ 23 uterine uterine NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 liver liver NOUN NN Number=Sing _ _ _ _ 26 cytosols cytosol NOUN NNS Number=Plur _ _ _ _ 27 contain contain VERB VB VerbForm=Inf _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 59 59 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kDa kDa NOUN NN Number=Sing _ _ _ _ 32 protein protein NOUN NN Number=Sing _ _ _ _ 33 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 Tai Tai PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 P.K. P.K. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 Maeda Maeda PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 Y. Y. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 Nakao Nakao PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 K. K. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 Wakim Wakim PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 N.G. N.G. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 Duhring Duhr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 , , PUNCT , _ _ _ _ _ 52 J.L. J.L. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 53 , , PUNCT , _ _ _ _ _ 54 & & CCONJ CC _ _ _ _ _ 55 Faber Faber PROPN NNP Number=Sing _ _ _ SpaceAfter=No 56 , , PUNCT , _ _ _ _ _ 57 L.E. L.E. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 58 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 59 1986 1986 NUM CD NumType=Card _ _ _ SpaceAfter=No 60 ) ) PUNCT -RRB- _ _ _ _ _ 61 Biochemistry Biochemistry NOUN NN Number=Sing _ _ _ _ 62 25 25 NUM CD NumType=Card _ _ _ SpaceAfter=No 63 , , PUNCT , _ _ _ _ _ 64 5269 5269 NUM CD NumType=Card _ _ _ SpaceAfter=No 65 - - SYM SYM _ _ _ _ SpaceAfter=No 66 5275 5275 NUM CD NumType=Card _ _ _ SpaceAfter=No 67 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 68 . . PUNCT . _ _ _ _ _ # sent_id = 3870 # text = In this work we show that the monoclonal antibody KN 382/EC1 raised against the rabbit 59-kDa protein reacts with 9S, untransformed glucocorticoid receptor complexes in cytosol prepared from human IM-9 lymphocytes but not with 4S salt-transformed receptors. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 work work NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 9 antibody antibody NOUN NN Number=Sing _ _ _ _ 10 KN KN NOUN NN Number=Sing _ _ _ _ 11 382/ 382/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 12 EC1 Ec1 PROPN NNP Number=Sing _ _ _ _ 13 raised raise VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 against against ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 rabbit rabbit NOUN NN Number=Sing _ _ _ _ 17 59 59 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kDa kDa NOUN NN Number=Sing _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 reacts react VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 S s NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 untransformed untransformed ADJ JJ Degree=Pos _ _ _ _ 27 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 28 receptor receptor NOUN NN Number=Sing _ _ _ _ 29 complexes complex NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 32 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 from from ADP IN _ _ _ _ _ 34 human human ADJ JJ Degree=Pos _ _ _ _ 35 IM Im NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 9 9 NUM CD NumType=Card _ _ _ _ 38 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 39 but but CCONJ CC _ _ _ _ _ 40 not not ADV RB _ _ _ _ _ 41 with with ADP IN _ _ _ _ _ 42 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 S S PROPN NNP Number=Sing _ _ _ _ 44 salt salt NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 3871 # text = The human protein recognized by the EC1 antibody is a 56-kDa protein (p56) of moderate abundance located predominantly in the cytoplasm by indirect immunofluorescence. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 recognized recognize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 EC1 EC1 PROPN NNP Number=Sing _ _ _ _ 8 antibody antibody NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 56 56 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kDa kDa NOUN NN Number=Sing _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 p56 p56 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 moderate moderate ADJ JJ Degree=Pos _ _ _ _ 20 abundance abundance NOUN NN Number=Sing _ _ _ _ 21 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 predominantly predominantly ADV RB _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 indirect indirect ADJ JJ Degree=Pos _ _ _ _ 28 immunofluorescence immunofluorescence NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3872 # text = There are at least six isomorphs of p56 by two-dimensional gel analysis. 1 There there PRON EX _ _ _ _ _ 2 are be VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 at at ADV RB _ _ _ _ _ 4 least least ADV RBS Degree=Sup _ _ _ _ 5 six six NUM CD NumType=Card _ _ _ _ 6 isomorphs isomorph NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 p56 p56 NUM CD NumType=Card _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 dimensional dimensional ADJ JJ Degree=Pos _ _ _ _ 13 gel gel NOUN NN Number=Sing _ _ _ _ 14 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3873 # text = N-Terminal sequencing (20 amino acids) shows that p56 is a unique human protein. 1 N- N- SYM NFP _ _ _ _ SpaceAfter=No 2 Terminal Terminal NOUN NN Number=Sing _ _ _ _ 3 sequencing sequencing NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 20 20 NUM CD NumType=Card _ _ _ _ 6 amino amino NOUN NN Number=Sing _ _ _ _ 7 acids acid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 shows show VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 11 p56 p56 NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 unique unique ADJ JJ Degree=Pos _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 3874 # text = When p56 is immunoadsorbed from IM-9 cell cytosol, both the 70- and 90-kDa heat shock proteins are coadsorbed in an immune-specific manner. 1 When when ADV WRB PronType=Int _ _ _ _ 2 p56 p56 NUM CD NumType=Card _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 immunoadsorbed immunoadsor VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 IM Im PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 9 9 NUM CD NumType=Card _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 cytosol cytosol NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 both both CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 70 70 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 90 90 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kDa kDa NOUN NN Number=Sing _ _ _ _ 20 heat heat NOUN NN Number=Sing _ _ _ _ 21 shock shock NOUN NN Number=Sing _ _ _ _ 22 proteins protein NOUN NNS Number=Plur _ _ _ _ 23 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 coadsorbed coadsor VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 immune-specific immune-specific ADJ JJ Degree=Pos _ _ _ _ 28 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3875 # text = Neither heat shock protein reacts directly with the EC1 antibody. 1 Neither neither DET DT _ _ _ _ _ 2 heat heat NOUN NN Number=Sing _ _ _ _ 3 shock shock NOUN NN Number=Sing _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 reacts react VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 directly directly ADV RB _ _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 EC1 ec1 PROPN NNP Number=Sing _ _ _ _ 10 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 3876 # text = We conclude that p56 exists in cytosol in a higher order complex containing hsp70 and hsp90, both of which in turn have been found to be associated with untransformed steroid receptors. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 p56 p56 NOUN NN Number=Sing _ _ _ _ 5 exists exist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 higher higher ADJ JJR Degree=Cmp _ _ _ _ 11 order order NOUN NN Number=Sing _ _ _ _ 12 complex complex NOUN NN Number=Sing _ _ _ _ 13 containing contain VERB VBG VerbForm=Ger _ _ _ _ 14 hsp70 hsp70 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 hsp90 hsp90 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 both both DET DT _ _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 which which PRON WDT PronType=Rel _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 turn turn NOUN NN Number=Sing _ _ _ _ 23 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 25 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 be be AUX VB VerbForm=Inf _ _ _ _ 28 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 untransformed untransform ADJ JJ Degree=Pos _ _ _ _ 31 steroid steroid NOUN NN Number=Sing _ _ _ _ 32 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3877 # text = Document 003003596 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003596 003003596 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3878 # text = Oncogenicity of human papillomavirus- or adenovirus-transformed cells correlates with resistance to lysis by natural killer cells. 1 Oncogenicity Oncogenicity NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 papillomavirus papillomavirus NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 adenovirus adenovirus NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 correlates correlate NOUN NNS Number=Plur _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 resistance resistance NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 lysis lysis PRON DT Number=Sing|PronType=Dem _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 natural natural ADJ JJ Degree=Pos _ _ _ _ 18 killer killer NOUN NN Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3879 # text = The reasons for the dissimilar oncogenicities of human adenoviruses and human papillomaviruses (HPV) in humans are unknown but may relate to differences in the capacities of the E1A and E7 proteins to target cells for rejection by the host natural killer (NK) cell response. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 reasons reason NOUN NNS Number=Plur _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 dissimilar dissimilar ADJ JJ Degree=Pos _ _ _ _ 6 oncogenicities oncogenicity NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 adenoviruses adenoviruse NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 papillomaviruses papillomaviruse NOUN NNS Number=Plur _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 HPV HPV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 humans human NOUN NNS Number=Plur _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 unknown unknown ADJ JJ Degree=Pos _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 may may AUX MD VerbForm=Fin _ _ _ _ 22 relate relate VERB VB VerbForm=Inf _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 differences difference NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 capacities capacity NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 E1A E1a PROPN NNP Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 E7 E7 NUM CD NumType=Card _ _ _ _ 33 proteins protein NOUN NNS Number=Plur _ _ _ _ 34 to to PART TO _ _ _ _ _ 35 target target VERB VB VerbForm=Inf _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 rejection rejection NOUN NN Number=Sing _ _ _ _ 39 by by ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 host host ADV RBS _ _ _ _ _ 42 natural natural ADJ JJ Degree=Pos _ _ _ _ 43 killer killer NOUN NN Number=Sing _ _ _ _ 44 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 45 NK NK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 ) ) PUNCT -RRB- _ _ _ _ _ 47 cell cell NOUN NN Number=Sing _ _ _ _ 48 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 3880 # text = As one test of this hypothesis, we compared the abilities of E1A- and E7-expressing human fibroblastic or keratinocyte-derived human cells to be selectively killed by either unstimulated or interferon (IFN)-activated NK cells. 1 As as SCONJ IN _ _ _ _ _ 2 one one NUM CD NumType=Card _ _ _ _ 3 test test NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 hypothesis hypothesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 9 compared compare VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 abilities abilitie NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 E1A E1A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 E7 E7 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 -expressing -expresse VERB VBG VerbForm=Ger _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 fibroblastic fibroblastic NOUN NN Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 keratinocyte keratinocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 be be AUX VB VerbForm=Inf _ _ _ _ 28 selectively selectively ADV RB _ _ _ _ _ 29 killed kill VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 either either CCONJ CC _ _ _ _ _ 32 unstimulated unstimulate ADJ JJ Degree=Pos _ _ _ _ 33 or or CCONJ CC _ _ _ _ _ 34 interferon interferon NOUN NN Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 NK Nk PROPN NNP Number=Sing _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3881 # text = Cells expressing the E1A oncoprotein were selectively killed by unstimulated NK cells, while the same parental cells but expressing the HPV type 16 (HPV-16) or HPV-18 E7 oncoprotein were resistant to NK cell lysis. 1 Cells cell NOUN NNS Number=Plur _ _ _ _ 2 expressing express VERB VBG VerbForm=Ger _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 E1A E1a NOUN NN Number=Sing _ _ _ _ 5 oncoprotein oncoprotein ADV WRB PronType=Rel _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 selectively selectively ADV RB _ _ _ _ _ 8 killed kill VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 unstimulated unstimulate ADJ JJ Degree=Pos _ _ _ _ 11 NK Nk PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 while while SCONJ IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 same same ADJ JJ Degree=Pos _ _ _ _ 17 parental parental ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 HPV HPV PROPN NNP Number=Sing _ _ _ _ 23 type type NOUN NN Number=Sing _ _ _ _ 24 16 16 NUM CD NumType=Card _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 HPV Hpv NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 16 16 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 HPV HPV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 18 18 NUM CD NumType=Card _ _ _ _ 34 E7 E7 NUM CD NumType=Card _ _ _ _ 35 oncoprotein oncoprotein NOUN NN Number=Sing _ _ _ _ 36 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 37 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 38 to to ADP IN _ _ _ _ _ 39 NK Nk PROPN NNP Number=Sing _ _ _ _ 40 cell cell PROPN NNP Number=Sing _ _ _ _ 41 lysis lysis PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3882 # text = The ability of IFN-activated NK cells to selectively kill virally transformed cells depends on IFN's ability to induce resistance to NK cell lysis in normal (i.e., non-viral oncogene-expressing) but not virally transformed cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ability ability NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 NK Nk PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 selectively selectively ADV RB _ _ _ _ _ 11 kill kill VERB VB VerbForm=Inf _ _ _ _ 12 virally virally ADV RB _ _ _ _ _ 13 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 depends depend VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 's 's PART POS _ _ _ _ _ 19 ability ability NOUN NN Number=Sing _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 induce induce VERB VB VerbForm=Inf _ _ _ _ 22 resistance resistance NOUN NN Number=Sing _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 NK Nk PROPN NNP Number=Sing _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 lysis lysis NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 normal normal ADJ JJ Degree=Pos _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 i.e. i.e. X FW _ _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 non-viral non-viral ADJ JJ Degree=Pos _ _ _ _ 33 oncogene oncogene ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 expressing expressing NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 but but CCONJ CC _ _ _ _ _ 38 not not ADV RB _ _ _ _ _ 39 virally virally ADV RB _ _ _ _ _ 40 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3883 # text = E1A blocked IFN's induction of cytolytic resistance, resulting in the selective lysis of adenovirus-transformed cells by IFN-activated NK cells. 1 E1A E1A PROPN NNP Number=Sing _ _ _ _ 2 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 's 's PART POS _ _ _ _ _ 5 induction induction NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 cytolytic cytolytic ADJ JJ Degree=Pos _ _ _ _ 8 resistance resistance NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 resulting result VERB VBG VerbForm=Ger _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 selective selective ADJ JJ Degree=Pos _ _ _ _ 14 lysis lysis NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 adenovirus adenovirus NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 NK Nk PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3884 # text = The extent of IFN-induced NK cell killing of E1A-expressing cells was proportional to the level of E1A expression and correlated with the ability of E1A to block IFN-stimulated gene expression in target cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 extent extent NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 NK Nk PROPN NNP Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 killing killing NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 E1A E1A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 proportional proportional ADJ JJ Degree=Pos _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 level level NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 E1 E1 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 ability ability NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 E1A E1A PROPN NNP Number=Sing _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 block block VERB VB VerbForm=Inf _ _ _ _ 33 IFN Ifn ADV RB _ _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 gene gene NOUN NN Number=Sing _ _ _ _ 37 expression expression NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 target target NOUN NN Number=Sing _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 3885 # text = In contrast, E7 blocked neither IFN-stimulated gene expression nor IFN's induction of cytolytic resistance, thereby precluding the selective lysis of HPV-transformed cells by IFN-activated NK cells. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 E7 E7 NUM CD NumType=Card _ _ _ _ 5 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 neither neither DET DT _ _ _ _ _ 7 IFN IFN NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 nor nor CCONJ CC _ _ _ _ _ 13 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 's 's PART POS _ _ _ _ _ 15 induction induction NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 cytolytic cytolytic ADJ JJ Degree=Pos _ _ _ _ 18 resistance resistance NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 thereby thereby ADV RB _ _ _ _ _ 21 precluding preclud VERB VBG VerbForm=Ger _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 selective selective ADJ JJ Degree=Pos _ _ _ _ 24 lysis lysis NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 HPV HPV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 NK Nk PROPN NNP Number=Sing _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 3886 # text = In conclusion, E1A expression marks cells for destruction by the host NK cell response, whereas the E7 oncoprotein lacks this activity. 1 In in ADP IN _ _ _ _ _ 2 conclusion conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 E1 E1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 marks mark VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 destruction destruction NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 host host NOUN NN Number=Sing _ _ _ _ 14 NK NK PROPN NNP Number=Sing _ _ _ _ 15 cell cell PROPN NNP Number=Sing _ _ _ _ 16 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 whereas whereas SCONJ IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 E7 E7 NOUN NN Number=Sing _ _ _ _ 21 oncoprotein oncoprotein ADV WRB PronType=Rel _ _ _ _ 22 lacks lack VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3887 # text = Document 003003597 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003597 003003597 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3888 # text = Cloning a cDNA from human NK/T cells which codes for a protein with high proline content. 1 Cloning Clon VERB VBG VerbForm=Ger _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 NK/T Nk/t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 codes code VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 high high ADJ JJ Degree=Pos _ _ _ _ 15 proline proline NOUN NN Number=Sing _ _ _ _ 16 content content NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3889 # text = A cDNA clone, B4-2, was isolated from a natural killer (NK) minus T cell subtractive library. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 3 clone clone NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 B4 B4 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 isolated isolate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 natural natural ADJ JJ Degree=Pos _ _ _ _ 14 killer killer NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 NK NK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 minus minus CCONJ CC _ _ _ _ _ 19 T T PROPN NNP Number=Sing _ _ _ _ 20 cell cell VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 subtractive subtractive ADJ JJ Degree=Pos _ _ _ _ 22 library library NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3890 # text = The B4-2 clone coded for an mRNA of 2061 bp in length. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 B4 B4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 clone clone NOUN NN Number=Sing _ _ _ _ 6 coded cod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 2061 2061 NUM CD NumType=Card _ _ _ _ 12 bp bp NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 length length NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 3891 # text = It encodes a deduced 327 aa protein with a calculated molecular mass of 35.2 kDa. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 deduced deduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 327 327 NUM CD NumType=Card _ _ _ _ 6 aa a DET DT Typo=Yes _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 calculated calculate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 12 mass mass NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 35.2 35.2 NUM CD NumType=Card _ _ _ _ 15 kDa. kDa. PROPN NNP Number=Sing _ _ _ _ # sent_id = 3892 # text = Searching of B4-2 DNA and protein sequences against various databases revealed no high homology to other sequences. 1 Searching searching VERB VBG VerbForm=Ger _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 B4 B4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 sequences sequence NOUN NNS Number=Plur _ _ _ _ 10 against against ADP IN _ _ _ _ _ 11 various various ADJ JJ Degree=Pos _ _ _ _ 12 databases database NOUN NNS Number=Plur _ _ _ _ 13 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 no no DET DT _ _ _ _ _ 15 high high ADJ JJ Degree=Pos _ _ _ _ 16 homology homology NOUN NN Number=Sing _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 other other ADJ JJ Degree=Pos _ _ _ _ 19 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3893 # text = However, B4-2 has an unusually high proline content (13%), contains a putative nuclear targeting sequence, and has several SPXX motifs which are frequently found in gene regulatory proteins. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 B4 B4 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - SYM SYM _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 unusually unusually ADV RB _ _ _ _ _ 9 high high ADJ JJ Degree=Pos _ _ _ _ 10 proline proline NOUN NN Number=Sing _ _ _ _ 11 content content NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 putative putative ADJ JJ Degree=Pos _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 targeting targeting NOUN NN Number=Sing _ _ _ _ 22 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 several several ADJ JJ Degree=Pos _ _ _ _ 27 SPXX Spxx NOUN NN Number=Sing _ _ _ _ 28 motifs motif NOUN NNS Number=Plur _ _ _ _ 29 which which PRON WDT PronType=Rel _ _ _ _ 30 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 frequently frequently ADV RB _ _ _ _ _ 32 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 gene gene ADJ JJ Degree=Pos _ _ _ _ 35 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 36 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3894 # text = One of the stretches of prolines in B4-2 closely resembles the ligand for proteins with SH3 domains. 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 stretches stretch NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 prolines proline NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 B4 B4 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - SYM SYM _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 closely closely ADV RB _ _ _ _ _ 12 resembles resemble VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 ligand ligand NOUN NN Number=Sing _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 proteins protein NOUN NNS Number=Plur _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 SH3 SH3 NOUN NN Number=Sing _ _ _ _ 19 domains domains NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3895 # text = Northern hybridization data showed that B4-2 is not a lymphoid specific gene and is expressed in a hepatoma cell line and also weakly transcribed or absent in a variety of other cells. 1 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 2 hybridization hybridization NOUN NN Number=Sing _ _ _ _ 3 data data NOUN NN Number=Sing _ _ _ _ 4 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 B4 B4 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 hepatoma hepatoma NOUN NN Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 line line NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 also also ADV RB _ _ _ _ _ 25 weakly weakly ADV RB _ _ _ _ _ 26 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 absent absent VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 variety variety NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 other other ADJ JJ Degree=Pos _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 3896 # text = A polyclonal antiserum raised against recombinant B4-2 recognizes a 32-34 kDa protein in lymphocytes. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 polyclonal polyclonal ADJ JJ Degree=Pos _ _ _ _ 3 antiserum antiserum NOUN NN Number=Sing _ _ _ _ 4 raised raise VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 against against ADP IN _ _ _ _ _ 6 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 7 B4 B4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 recognizes recognize NOUN NNS Number=Plur _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 32 32 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - SYM SYM _ _ _ _ SpaceAfter=No 14 34 34 NUM CD NumType=Card _ _ _ _ 15 kDa kDa PROPN NNP Number=Sing _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3897 # text = Document 003003598 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003598 003003598 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3898 # text = Visualization of the endogenous NF-kappa B p50 subunit in the nucleus of follicular dendritic cells in germinal centers. 1 Visualization visualization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 5 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 p50 p50 NUM CD NumType=Card _ _ _ _ 10 subunit subunit NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 follicular follicular ADJ JJ Degree=Pos _ _ _ _ 16 dendritic dendritic ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 germinal germinal ADJ JJ Degree=Pos _ _ _ _ 20 centers center NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3899 # text = NF-kappa B, a 50 kDa/65 kDa (p50/p65) heterodimer, is a ubiquitous transcription factor involved in the positive regulation of various immune genes. 1 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa PROPN NNP Number=Sing _ _ _ _ 4 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 50 50 NUM CD NumType=Card _ _ _ _ 8 kDa/65 kDa/65 NOUN NN Number=Sing _ _ _ _ 9 kDa kDa PROPN NNP Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 / / SYM SYM _ _ _ _ SpaceAfter=No 13 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 heterodimer heterodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 positive positive ADJ JJ Degree=Pos _ _ _ _ 26 regulation regulation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 various various ADJ JJ Degree=Pos _ _ _ _ 29 immune immune ADJ JJ Degree=Pos _ _ _ _ 30 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 3900 # text = The aim of this study was to determine whether NF-kappa B is related to a particular cell type and/or differentiation step during immunopoiesis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 aim aim NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 study study NOUN NN Number=Sing _ _ _ _ 6 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 determine determine VERB VB VerbForm=Inf _ _ _ _ 9 whether whether SCONJ IN _ _ _ _ _ 10 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 related related ADJ JJ Degree=Pos _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 particular particular ADJ JJ Degree=Pos _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 type type NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ SpaceAfter=No 22 / / PUNCT , _ _ _ _ SpaceAfter=No 23 or or CCONJ CC _ _ _ _ _ 24 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 25 step step NOUN NN Number=Sing _ _ _ _ 26 during during ADP IN _ _ _ _ _ 27 immunopoiesis immunopoiesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3901 # text = Using in situ hybridization on sections from non HIV hyperplastic lymph nodes, we found that the gene of the 105 kDa precursor of p50 was overexpressed in the light zone of germinal centers, with a network aspect, which suggested the involvement of follicular dendritic cells (FDC). 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 situ situ NOUN NN Number=Sing _ _ _ _ 4 hybridization hybridization NOUN NN Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 sections section NOUN NNS Number=Plur _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 non non PROPN NNP Number=Sing _ _ _ _ 9 HIV HIV PROPN NNP Number=Sing _ _ _ _ 10 hyperplastic hyperplastic ADJ JJ Degree=Pos _ _ _ _ 11 lymph lymph NOUN NN Number=Sing _ _ _ _ 12 nodes node NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 15 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 105 105 NUM CD NumType=Card _ _ _ _ 22 kDa kDa NOUN NN Number=Sing _ _ _ _ 23 precursor precursor NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 p50 p50 NOUN NN Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 overexpressed overexpress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 light light NOUN NN Number=Sing _ _ _ _ 31 zone zone NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 germinal germinal ADJ JJ Degree=Pos _ _ _ _ 34 centers center NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 network network NOUN NN Number=Sing _ _ _ _ 39 aspect aspect NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 which which PRON WDT PronType=Rel _ _ _ _ 42 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 involvement involvement NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 follicular follicular ADJ JJ Degree=Pos _ _ _ _ 47 dendritic dendritic ADJ JJ Degree=Pos _ _ _ _ 48 cells cell NOUN NNS Number=Plur _ _ _ _ 49 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 50 FDC FDC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 3902 # text = By immunohistochemistry, p50 protein was detected in the cytoplasm and nucleus of FDC, confirming the involvement of FDC. 1 By by ADP IN _ _ _ _ _ 2 immunohistochemistry immunohistochemistry NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 p50 p50 NUM CD NumType=Card _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 FDC FDC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 confirming confirm VERB VBG VerbForm=Ger _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 involvement involvement NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 FDC FDC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3903 # text = Furthermore, p50 protein was detected in the cytoplasm of all lymphocytes. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 p50 p50 NUM CD NumType=Card _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 all all DET DT _ _ _ _ _ 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 3904 # text = Thus, we focused our study on isolated FDC clusters from normal tonsils. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 focused focus VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 6 study study NOUN NN Number=Sing _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 FDC Fdc NOUN NN Number=Sing _ _ _ _ 10 clusters cluster NOUN NNS Number=Plur _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 normal normal ADJ JJ Degree=Pos _ _ _ _ 13 tonsils tonsil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 3905 # text = As showed on tissue sections, we detected the p50 in both cytoplasm and nucleus of FDC. 1 As as SCONJ IN _ _ _ _ _ 2 showed show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 on on ADP IN _ _ _ _ _ 4 tissue tissue NOUN NN Number=Sing _ _ _ _ 5 sections section NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 8 detected detect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 p50 p50 NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 both both CCONJ CC _ _ _ _ _ 13 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 FDC FDC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3906 # text = Nuclei of lymphocytes from FDC clusters were negative. 1 Nuclei Nuclei NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 FDC FDC PROPN NNP Number=Sing _ _ _ _ 6 clusters cluster NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 negative negative ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 3907 # text = We next studied p65 and c-Rel protein expression in FDC clusters. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 next next ADV RB _ _ _ _ _ 3 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 p65 p65 NUM CD NumType=Card _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 Rel Rel NOUN NN Number=Sing _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 FDC FDC ADJ JJ Degree=Pos _ _ _ _ 13 clusters cluster NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 3908 # text = p65 was detected in the cytoplasm of FDC, whereas nuclei were negative. 1 p65 p65 NOUN NN Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 FDC FDC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 whereas whereas SCONJ IN _ _ _ _ _ 11 nuclei nuclei NOUN NNS Number=Plur _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 negative negative ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 3909 # text = Furthermore, p65 was detected in the nuclei of some lymphocytes. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 p65 p65 NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 some some DET DT _ _ _ _ _ 11 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 3910 # text = c-Rel protein was detected only in the cytoplasm of lymphocytes and not in the nucleus and cytoplasm of FDC. 1 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 Rel Rel NOUN NN Number=Sing _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 only only ADV RB _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 FDC FDC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3911 # text = Our results indicated that, in the context of T cell-dependent B cell immunopoiesis occurring in FDC clusters, p50 is mainly related to FDC with a massive overexpression in the nuclei, whereas p65 is expressed in a scattered manner in the nuclei of lymphocytes and c-Rel protein exclusively in the cytoplasm of lymphocytes from FDC clusters. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 context context NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 immunopoiesis immunopoiesis NOUN NN Number=Sing _ _ _ _ 17 occurring occurre VERB VBG VerbForm=Ger _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 FDC FDC PROPN NNP Number=Sing _ _ _ _ 20 clusters cluster NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 p50 p50 NOUN NN Number=Sing _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 mainly mainly ADV RB _ _ _ _ _ 25 related related ADJ JJ Degree=Pos _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 FDC FDC PROPN NNP Number=Sing _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 massive massive ADJ JJ Degree=Pos _ _ _ _ 31 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 nuclei nuclei NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 whereas whereas SCONJ IN _ _ _ _ _ 37 p65 p65 NOUN NN Number=Sing _ _ _ _ 38 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 scattered scatter VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 manner manner NOUN NN Number=Sing _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 47 of of ADP IN _ _ _ _ _ 48 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 Rel Rel NOUN NN Number=Sing _ _ _ _ 53 protein protein NOUN NN Number=Sing _ _ _ _ 54 exclusively exclusively ADV RB _ _ _ _ _ 55 in in ADP IN _ _ _ _ _ 56 the the DET DT Definite=Def|PronType=Art _ _ _ _ 57 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 58 of of ADP IN _ _ _ _ _ 59 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 60 from from ADP IN _ _ _ _ _ 61 FDC FDC PROPN NNP Number=Sing _ _ _ _ 62 clusters cluster NOUN NNS Number=Plur _ _ _ SpaceAfter=No 63 . . PUNCT . _ _ _ _ _ # sent_id = 3912 # text = These results suggested that the two subunits of NF-kappa B and the c-Rel protein have different roles in different cell types during B cell immunopoiesis. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 two two NUM CD NumType=Card _ _ _ _ 7 subunits subunit NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa PROPN NNP Number=Sing _ _ _ _ 12 B b PROPN NNP Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 Rel Rel NOUN NN Number=Sing _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 different different ADJ JJ Degree=Pos _ _ _ _ 21 roles role NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 different different ADJ JJ Degree=Pos _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 types type NOUN NNS Number=Plur _ _ _ _ 26 during during ADP IN _ _ _ _ _ 27 B b ADJ JJ Degree=Pos _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 immunopoiesis immunopoiesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3913 # text = Document 003003607 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003607 003003607 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3914 # text = Sp1 functions in a chromatin-dependent manner to augment human alpha-globin promoter activity. 1 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 2 functions function NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 chromatin chromatin NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 8 manner manner NOUN NN Number=Sing _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 augment augment VERB VB VerbForm=Inf _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 globin globin NOUN NN Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3915 # text = The 5' flanking region of the human alpha-globin gene is highly G + C rich and contains multiple copies of the consensus sequence for the Sp1 binding site. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 ' ' PUNCT `` _ _ _ _ _ 4 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 5 region region NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 globin globin NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 highly highly ADV RB _ _ _ _ _ 15 G G ADJ JJ Degree=Pos _ _ _ _ 16 + + SYM SYM _ _ _ _ _ 17 C C PROPN NNP Number=Sing _ _ _ _ 18 rich rich ADJ JJ Degree=Pos _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 22 copies copy NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 consensus consensus NOUN NN Number=Sing _ _ _ _ 26 sequence sequence NOUN NN Number=Sing _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 30 binding bind VERB VBG VerbForm=Ger _ _ _ _ 31 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3916 # text = We investigated the role of this G + C-rich region in augmenting alpha-globin promoter activity in the presence of the far-upstream alpha-globin enhancer, HS-40. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 G g NOUN NN Number=Sing _ _ _ _ 8 + + SYM SYM _ _ _ _ _ 9 C- C- SYM NFP _ _ _ _ SpaceAfter=No 10 rich rich ADJ JJ Degree=Pos _ _ _ _ 11 region region NOUN NN Number=Sing _ _ _ _ 12 in in SCONJ IN _ _ _ _ _ 13 augmenting augment VERB VBG VerbForm=Ger _ _ _ _ 14 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 globin globin ADJ JJ Degree=Pos _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 presence presence NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 far- far- X AFX _ _ _ _ SpaceAfter=No 25 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 26 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 globin globin NOUN NN Number=Sing _ _ _ _ 29 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 HS HS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - SYM SYM _ _ _ _ SpaceAfter=No 33 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 3917 # text = We show that in transiently transfected erythroid cells, deletion of the alpha-globin G + C-rich 5' flanking region has no effect on alpha-globin promoter activity. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 transiently transiently ADV RB _ _ _ _ _ 6 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 deletion deletion NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 globin globin NOUN NN Number=Sing _ _ _ _ 16 G g NOUN NN Number=Sing _ _ _ _ 17 + + SYM SYM _ _ _ _ _ 18 C- C- SYM NFP _ _ _ _ SpaceAfter=No 19 rich rich ADJ JJ Degree=Pos _ _ _ _ 20 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ' ' PUNCT `` _ _ _ _ _ 22 flanking flanking NOUN NN Number=Sing _ _ _ _ 23 region region NOUN NN Number=Sing _ _ _ _ 24 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 no no DET DT _ _ _ _ _ 26 effect effect NOUN NN Number=Sing _ _ _ _ 27 on on ADP IN _ _ _ _ _ 28 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 globin globin NOUN NN Number=Sing _ _ _ _ 31 promoter promoter NOUN NN Number=Sing _ _ _ _ 32 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3918 # text = However, upon stable integration into chromatin, deletion of this region causes a nearly 90% decrease in promoter activity compared with expression from an alpha-globin promoter retaining this region. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 upon upon ADP IN _ _ _ _ _ 4 stable stable ADJ JJ Degree=Pos _ _ _ _ 5 integration integration NOUN NN Number=Sing _ _ _ _ 6 into into ADP IN _ _ _ _ _ 7 chromatin chromatin NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 deletion deletion NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 12 region region NOUN NN Number=Sing _ _ _ _ 13 causes cause VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 nearly nearly ADV RB _ _ _ _ _ 16 90 90 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 % % SYM NN Number=Sing _ _ _ _ 18 decrease decrease NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 promoter promoter ADJ JJ Degree=Pos _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 from from ADP IN _ _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 globin globin NOUN NN Number=Sing _ _ _ _ 30 promoter promoter NOUN NN Number=Sing _ _ _ _ 31 retaining retain VERB VBG VerbForm=Ger _ _ _ _ 32 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 33 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 3919 # text = These results suggest that the alpha-globin G + C-rich 5' flanking region augments alpha-globin promoter activity in a chromatin-dependent manner. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 globin globin NOUN NN Number=Sing _ _ _ _ 9 G g NOUN NN Number=Sing _ _ _ _ 10 + + SYM SYM _ _ _ _ _ 11 C- C- SYM NFP _ _ _ _ SpaceAfter=No 12 rich rich ADJ JJ Degree=Pos _ _ _ _ 13 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ' ' PUNCT `` _ _ _ _ _ 15 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 16 region region NOUN NN Number=Sing _ _ _ _ 17 augments augment NOUN NNS Number=Plur _ _ _ _ 18 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 globin globin ADJ JJ Degree=Pos _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 chromatin chromatin NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 28 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3920 # text = We further show that this G + C-rich region is required for the activation of alpha-globin gene expression during erythroid differentiation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 G g NOUN NN Number=Sing _ _ _ _ 7 + + SYM SYM _ _ _ _ _ 8 C- C- SYM SYM _ _ _ _ SpaceAfter=No 9 rich rich ADJ JJ Degree=Pos _ _ _ _ 10 region region NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 globin globin ADJ JJ Degree=Pos _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 during during ADP IN _ _ _ _ _ 23 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 24 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3921 # text = Finally, we show by both footprint analysis and functional assays that the ability of the G + C-rich region to increase alpha-globin promoter activity from a stably integrated alpha-globin gene is mediated by its multiple binding sites for the transcription factor Sp1. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 both both DET DT _ _ _ _ _ 7 footprint footprint NOUN NN Number=Sing _ _ _ _ 8 analysis analysis NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 functional functional ADJ JJ Degree=Pos _ _ _ _ 11 assays assay NOUN NNS Number=Plur _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 ability ability NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 G g PROPN NNP Number=Sing _ _ _ _ 18 + + SYM SYM _ _ _ _ _ 19 C- C- SYM SYM _ _ _ _ SpaceAfter=No 20 rich rich ADJ JJ Degree=Pos _ _ _ _ 21 region region NOUN NN Number=Sing _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 increase increase VERB VB VerbForm=Inf _ _ _ _ 24 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 globin globin ADJ JJ Degree=Pos _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ _ 29 from from ADP IN _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 stably stably ADV RB _ _ _ _ _ 32 integrated integrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 globin globin NOUN NN Number=Sing _ _ _ _ 36 gene gene NOUN NN Number=Sing _ _ _ _ 37 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 by by ADP IN _ _ _ _ _ 40 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 41 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 42 binding binding VERB VBG VerbForm=Ger _ _ _ _ 43 sites site NOUN NNS Number=Plur _ _ _ _ 44 for for ADP IN _ _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 transcription transcription NOUN NN Number=Sing _ _ _ _ 47 factor factor NOUN NN Number=Sing _ _ _ _ 48 Sp1 sp1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3922 # text = Document 003003608 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003608 003003608 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3923 # text = A central role for a single c-Myb binding site in a thymic locus control region. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 central central ADJ JJ Degree=Pos _ _ _ _ 3 role role NOUN NN Number=Sing _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 single single ADJ JJ Degree=Pos _ _ _ _ 7 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 Myb Myb PROPN NNP Number=Sing _ _ _ _ 10 binding bind VERB VBG VerbForm=Ger _ _ _ _ 11 site site NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 thymic thymic ADJ JJ Degree=Pos _ _ _ _ 15 locus locus NOUN NN Number=Sing _ _ _ _ 16 control control NOUN NN Number=Sing _ _ _ _ 17 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3924 # text = Locus control regions (LCRs) are powerful assemblies of cis elements that organize the actions of cell-type-specific trans-acting factors. 1 Locus Locus ADJ JJ Degree=Pos _ _ _ _ 2 control control NOUN NN Number=Sing _ _ _ _ 3 regions region NOUN NNS Number=Plur _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 LCRs LCR NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 powerful powerful ADJ JJ Degree=Pos _ _ _ _ 9 assemblies assembly NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 cis cis NOUN NN Number=Sing _ _ _ _ 12 elements element NOUN NNS Number=Plur _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 organize organize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 actions action NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 specific specific ADJ JJ Degree=Pos _ _ _ _ 23 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 acting act VERB VBG VerbForm=Ger _ _ _ _ 26 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3925 # text = A 2.3-kb LCR in the human adenosine deaminase (ADA) gene first intron, which controls expression in thymocytes, is composed of a 200-bp enhancer domain and extended flanking sequences that facilitate activation from within chromatin. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 2.3 2.3 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kb kb NOUN NN Number=Sing _ _ _ _ 5 LCR Lcr NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 adenosine adenosine NOUN NN Number=Sing _ _ _ _ 10 deaminase deaminase NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 ADA ada PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 gene gene PRON NN Number=Sing _ _ _ _ 15 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 16 intron intron NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 controls control VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 200 200 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 bp bp NOUN NN Number=Sing _ _ _ _ 31 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 32 domain domain NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 extended extend VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 36 sequences sequence NOUN NNS Number=Plur _ _ _ _ 37 that that PRON WDT PronType=Rel _ _ _ _ 38 facilitate facilitate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 39 activation activation NOUN NN Number=Sing _ _ _ _ 40 from from ADP IN _ _ _ _ _ 41 within within ADP IN _ _ _ _ _ 42 chromatin chromatin NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 3926 # text = Prior analyses have demonstrated that the enhancer contains a 28-bp core region and local adjacent augmentative cis elements. 1 Prior prior ADJ JJ Degree=Pos _ _ _ _ 2 analyses analysis NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 8 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 28 28 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 bp bp NOUN NN Number=Sing _ _ _ _ 13 core core NOUN NN Number=Sing _ _ _ _ 14 region region NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 local local ADJ JJ Degree=Pos _ _ _ _ 17 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 18 augmentative augmentative ADJ JJ Degree=Pos _ _ _ _ 19 cis cis NOUN NN Number=Sing _ _ _ _ 20 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3927 # text = We now show that the core contains a single critical c-Myb binding site. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 now now ADV RB _ _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 core core NOUN NN Number=Sing _ _ _ _ 7 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 single single ADJ JJ Degree=Pos _ _ _ _ 10 critical critical ADJ JJ Degree=Pos _ _ _ _ 11 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 Myb Myb PROPN NNP Number=Sing _ _ _ _ 14 binding binding VERB VBG VerbForm=Ger _ _ _ _ 15 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 3928 # text = In both transiently cotransfected human cells and stable chromatin-integrated yeast cells, c-Myb strongly transactivated reporter constructs that contained polymerized core sequences. 1 In in ADP IN _ _ _ _ _ 2 both both DET DT _ _ _ _ _ 3 transiently transiently ADV RB _ _ _ _ _ 4 cotransfected cotransfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 stable stable ADJ JJ Degree=Pos _ _ _ _ 9 chromatin- chromatin- PUNCT , _ _ _ _ SpaceAfter=No 10 integrated integrate ADJ JJ Degree=Pos _ _ _ _ 11 yeast yeast ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 c- c- SYM NFP _ _ _ _ SpaceAfter=No 15 Myb Myb PROPN NNP Number=Sing _ _ _ _ 16 strongly strongly ADV RB _ _ _ _ _ 17 transactivated transactivate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 reporter reporter NOUN NN Number=Sing _ _ _ _ 19 constructs constructs NOUN NNS Number=Plur _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 contained contain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 polymerized polymerize ADJ JJ Degree=Pos _ _ _ _ 23 core core NOUN NN Number=Sing _ _ _ _ 24 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 3929 # text = c-Myb protein was strongly evident in T lymphoblasts in which the enhancer was active and was localized within discrete nuclear structures. 1 c- c- SYM NFP _ _ _ _ SpaceAfter=No 2 Myb Myb PROPN NNP Number=Sing _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 strongly strongly ADV RB _ _ _ _ _ 6 evident evident ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 lymphoblasts lymphoblast NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 active active ADJ JJ Degree=Pos _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=1|Tense=Past|VerbForm=Fin _ _ _ _ 18 localized localize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 within within ADP IN _ _ _ _ _ 20 discrete discrete NOUN NN Number=Sing _ _ _ _ 21 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 22 structures structure NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3930 # text = Fetal murine thymus exhibited a striking concordance of endogenous c-myb expression with that of mouse ADA and human ADA LCR-directed transgene expression. 1 Fetal Fetal ADJ JJ Degree=Pos _ _ _ _ 2 murine murine NOUN NN Number=Sing _ _ _ _ 3 thymus thymus NOUN NN Number=Sing _ _ _ _ 4 exhibited exhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 striking strik NOUN NN Number=Sing _ _ _ _ 7 concordance concordance NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 10 c- c- PUNCT : _ _ _ _ SpaceAfter=No 11 myb myb NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 mouse mouse NOUN NN Number=Sing _ _ _ _ 17 ADA ada NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 ADA Ada PROPN NNP Number=Sing _ _ _ _ 21 LCR LCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 transgene transgene NOUN NN Number=Sing _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 3931 # text = Point mutation of the c-Myb site within the intact 2.3-kb LCR severely attenuated enhancer activity in transfections and LCR activity in transgenic thymocytes. 1 Point point NOUN NN Number=Sing _ _ _ _ 2 mutation mutation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 Myb Myb NOUN NN Number=Sing _ _ _ _ 8 site site NOUN NN Number=Sing _ _ _ _ 9 within within ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 intact intact NOUN NN Number=Sing _ _ _ _ 12 2.3 2.3 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT : _ _ _ _ SpaceAfter=No 14 kb kb NOUN NN Number=Sing _ _ _ _ 15 LCR LCR X GW _ _ _ _ _ 16 severely severely ADV RB _ _ _ _ _ 17 attenuated attenuate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 transfections transfection NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 LCR Lcr ADJ JJ Degree=Pos _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 27 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3932 # text = Within the context of a complex enhancer and LCR, c-Myb can act as an organizer of thymocyte-specific gene expression via a single binding site. 1 Within within ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 context context NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 complex complex ADJ JJ Degree=Pos _ _ _ _ 7 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 LCR Lcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 c- c- SYM NFP _ _ _ _ SpaceAfter=No 12 Myb Myb PROPN NNP Number=Sing _ _ _ _ 13 can can AUX MD VerbForm=Fin _ _ _ _ 14 act act VERB VB VerbForm=Inf _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 organizer organizer NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 thymocyte thymocyte ADV RB _ _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 specific specific ADJ JJ Degree=Pos _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 via via ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 single single ADJ JJ Degree=Pos _ _ _ _ 27 binding binding NOUN NN Number=Sing _ _ _ _ 28 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3933 # text = Document 003003609 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003609 003003609 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3934 # text = [Hormonal metabolic status in breast cancer patients after conservative surgery: comparison with known prognostic criteria] 1 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 Hormonal Hormonal ADJ JJ Degree=Pos _ _ _ _ 3 metabolic metabolic ADJ JJ Degree=Pos _ _ _ _ 4 status status NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 breast breast NOUN NN Number=Sing _ _ _ _ 7 cancer cancer NOUN NN Number=Sing _ _ _ _ 8 patients patient NOUN NNS Number=Plur _ _ _ _ 9 after after ADP IN _ _ _ _ _ 10 conservative conservative ADJ JJ Degree=Pos _ _ _ _ 11 surgery surgery NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 : : PUNCT : _ _ _ _ _ 13 comparison comparison NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 prognostic prognostic ADJ JJ Degree=Pos _ _ _ _ 17 criteria criteria NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 3935 # text = Body weight, body mass index, body fat, lean body mass, blood-glucose, cholesterol, HDL-cholesterol, triglyceride, beta-lipoproteins, insulin, gonadotropin, estradiol, testosterone, SHBG, T3, T4 and TSH levels as well as estradiol and progesterone receptor levels in excised tumor were studied in 40 patients with breast cancer prior to conservative treatment. 1 Body Body NOUN NN Number=Sing _ _ _ _ 2 weight weight NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 body body NOUN NN Number=Sing _ _ _ _ 5 mass mass ADJ JJ Degree=Pos _ _ _ _ 6 index index NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 body body NOUN NN Number=Sing _ _ _ _ 9 fat fat ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 lean lean ADJ JJ Degree=Pos _ _ _ _ 12 body body NOUN NN Number=Sing _ _ _ _ 13 mass mass ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 blood blood NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 glucose glucose NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 cholesterol cholesterol NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 HDL Hdl NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 cholesterol cholesterol NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 triglyceride triglyceride NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 lipoproteins lipoprotein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 insulin insulin NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 gonadotropin gonadotropin NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 estradiol estradiol NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 testosterone testosterone NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 SHBG SHBG NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 T3 T3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 T4 T4 NUM CD NumType=Card _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 TSH Tsh NOUN NN Number=Sing _ _ _ _ 46 levels level NOUN NNS Number=Plur _ _ _ _ 47 as as ADV RB _ _ _ _ _ 48 well well ADV RB Degree=Pos _ _ _ _ 49 as as ADP IN _ _ _ _ _ 50 estradiol estradiol ADJ JJ Degree=Pos _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 progesterone progesterone ADJ JJ Degree=Pos _ _ _ _ 53 receptor receptor NOUN NN Number=Sing _ _ _ _ 54 levels level NOUN NNS Number=Plur _ _ _ _ 55 in in ADP IN _ _ _ _ _ 56 excised excised ADJ JJ Degree=Pos _ _ _ _ 57 tumor tumor NOUN NN Number=Sing _ _ _ _ 58 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 59 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 60 in in ADP IN _ _ _ _ _ 61 40 40 NUM CD NumType=Card _ _ _ _ 62 patients patient NOUN NNS Number=Plur _ _ _ _ 63 with with ADP IN _ _ _ _ _ 64 breast breast NOUN NN Number=Sing _ _ _ _ 65 cancer cancer NOUN NN Number=Sing _ _ _ _ 66 prior prior ADJ JJ Degree=Pos _ _ _ _ 67 to to ADP IN _ _ _ _ _ 68 conservative conservative ADJ JJ Degree=Pos _ _ _ _ 69 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 70 . . PUNCT . _ _ _ _ _ # sent_id = 3936 # text = Said anthropometric, metabolic and hormonal parameters were compared with the index of lymphocytic infiltration of tumor selected as a prognostic factor. 1 Said say ADJ JJ Degree=Pos _ _ _ _ 2 anthropometric anthropometric ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 metabolic metabolic ADJ JJ Degree=Pos _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 hormonal hormonal ADJ JJ Degree=Pos _ _ _ _ 7 parameters parameter NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 compared compare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 index index NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 lymphocytic lymphocytic ADJ JJ Degree=Pos _ _ _ _ 15 infiltration infiltration NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 tumor tumor NOUN NN Number=Sing _ _ _ _ 18 selected select VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 as as ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 prognostic prognostic ADJ JJ Degree=Pos _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3937 # text = A significant correlation between high lymphocytic infiltration (2.5 points), low body mass and fat was identified. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 significant significant ADJ JJ Degree=Pos _ _ _ _ 3 correlation correlation NOUN NN Number=Sing _ _ _ _ 4 between between ADP IN _ _ _ _ _ 5 high high ADJ JJ Degree=Pos _ _ _ _ 6 lymphocytic lymphocytic ADJ JJ Degree=Pos _ _ _ _ 7 infiltration infiltration NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 2.5 2.5 NUM CD NumType=Card _ _ _ _ 10 points point NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 low low ADJ JJ Degree=Pos _ _ _ _ 14 body body NOUN NN Number=Sing _ _ _ _ 15 mass mass NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 fat fat NOUN NN Number=Sing _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3938 # text = Also, smoking contributed to loss of body mass and fat; however, it caused lymphocytic infiltration to rise. 1 Also also ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 smoking smok NOUN NN Number=Sing _ _ _ _ 4 contributed contribute VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 loss loss VERB VB VerbForm=Inf _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 body body NOUN NN Number=Sing _ _ _ _ 9 mass mass ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 fat fat ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 ; ; PUNCT , _ _ _ _ _ 13 however however ADV RB _ _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 16 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 lymphocytic lymphocytic ADJ JJ Degree=Pos _ _ _ _ 18 infiltration infiltration NOUN NN Number=Sing _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 rise rise VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 3939 # text = Moderate body mass, relatively low fat level and positive receptor status are among factors of good prognosis in breast cancer of early stages. 1 Moderate moderate ADJ JJ Degree=Pos _ _ _ _ 2 body body NOUN NN Number=Sing _ _ _ _ 3 mass mass ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 relatively relatively ADV RB _ _ _ _ _ 6 low low ADJ JJ Degree=Pos _ _ _ _ 7 fat fat ADJ JJ Degree=Pos _ _ _ _ 8 level level NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 positive positive ADJ JJ Degree=Pos _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 status status NOUN NN Number=Sing _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 among among ADP IN _ _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 good good ADJ JJ Degree=Pos _ _ _ _ 18 prognosis prognosis NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 breast breast NOUN NN Number=Sing _ _ _ _ 21 cancer cancer NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 early early ADJ JJ Degree=Pos _ _ _ _ 24 stages stage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3940 # text = Document 003003610 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003610 003003610 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3941 # text = FK506 and ciclosporin: molecular probes for studying intracellular signal transduction. 1 FK506 FK506 NUM CD NumType=Card _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 ciclosporin ciclosporin NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ 5 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 6 probes probe NOUN NNS Number=Plur _ _ _ _ 7 for for SCONJ IN _ _ _ _ _ 8 studying study VERB VBG VerbForm=Ger _ _ _ _ 9 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 10 signal signal NOUN NN Number=Sing _ _ _ _ 11 transduction transduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3942 # text = The immunosuppressants ciclosporin and FK506 block the Ca(2+)-dependent signal-transduction pathway emanating from the T-cell receptor, thereby inhibiting the activation of helper T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 immunosuppressants immunosuppressant NOUN NNS Number=Plur _ _ _ _ 3 ciclosporin ciclosporin VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 FK506 FK506 NUM CD NumType=Card _ _ _ _ 6 block block NOUN NN Number=Sing _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 Ca ca NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 +) +) SYM NFP _ _ _ _ SpaceAfter=No 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 14 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 transduction transduction NOUN NN Number=Sing _ _ _ _ 17 pathway pathway NOUN NN Number=Sing _ _ _ _ 18 emanating emanat VERB VBG VerbForm=Ger _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 thereby thereby ADV RB _ _ _ _ _ 26 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 helper helper ADJ JJR Degree=Cmp _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3943 # text = Using these drugs as probes, chemists and biologists have uncovered several intracellular signalling molecules bridging the generation of second-messenger Ca2+ ions and the transcriptional activation of IL-2, among which are calmodulin, calcineurin and the nuclear factor of activated T cells (NF-AT). 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 drugs drug NOUN NNS Number=Plur _ _ _ _ 4 as as ADP IN _ _ _ _ _ 5 probes probe NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 chemists chemist NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 biologists biologist NOUN NNS Number=Plur _ _ _ _ 10 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 uncovered uncover VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 several several ADJ JJ Degree=Pos _ _ _ _ 13 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 14 signalling signalling NOUN NN Number=Sing _ _ _ _ 15 molecules molecule NOUN NNS Number=Plur _ _ _ _ 16 bridging bridge VERB VBG VerbForm=Ger _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 generation generation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 messenger messenger NOUN NN Number=Sing _ _ _ _ 23 Ca2 ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 + + SYM SYM _ _ _ _ _ 25 ions ion NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 among among ADP IN _ _ _ _ _ 36 which which PRON WDT PronType=Rel _ _ _ _ 37 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 38 calmodulin calmodulin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 44 factor factor NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 T t PROPN NNP Number=Sing _ _ _ _ 48 cells cell NOUN NNS Number=Plur _ _ _ _ 49 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 50 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 53 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 3944 # text = Hence, Ca2+ binds to calmodulin, leading to the binding of calmodulin to calcineurin; the activated calcineurin, in turn, may dephosphorylate the cytoplasmic subunit of NF-AT, resulting in its translocation from the cytoplasm into the nucleus to form a competent transcriptional activator. 1 Hence hence ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 + + SYM SYM _ _ _ _ _ 5 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 calmodulin calmodulin VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 leading lead VERB VBG VerbForm=Ger _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 binding binding NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 calmodulin calmodulin NOUN NN Number=Sing _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 calcineurin calcineurin VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 17 ; ; PUNCT , _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 turn turn NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 may may AUX MD VerbForm=Fin _ _ _ _ 26 dephosphorylate dephosphorylate VERB VB VerbForm=Inf _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 29 subunit subunit NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 resulting result VERB VBG VerbForm=Ger _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 38 translocation translocation NOUN NN Number=Sing _ _ _ _ 39 from from ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 42 into into ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 45 to to PART TO _ _ _ _ _ 46 form form VERB VB VerbForm=Inf _ _ _ _ 47 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 48 competent competent ADJ JJ Degree=Pos _ _ _ _ 49 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 50 activator activator NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 3945 # text = As described by Jun Liu, these drugs manifest their effects in an unprecedented fashion. 1 As as SCONJ IN _ _ _ _ _ 2 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 Jun Jun PROPN NNP Number=Sing _ _ _ _ 5 Liu Liu PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 drugs drug NOUN NNS Number=Plur _ _ _ _ 9 manifest manifest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 11 effects effect NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 unprecedented unprecedented ADJ JJ Degree=Pos _ _ _ _ 15 fashion fashion NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 3946 # text = They do not directly intercept intracellular signalling molecules. 1 They they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 2 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 not not PART RB _ _ _ _ _ 4 directly directly ADV RB _ _ _ _ _ 5 intercept intercept VERB VB VerbForm=Inf _ _ _ _ 6 intracellular intracelular ADJ JJ Degree=Pos _ _ _ _ 7 signalling signall NOUN NN Number=Sing _ _ _ _ 8 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 3947 # text = Instead, they form tight complexes with two different classes of abundant cytosolic receptors called immunophilins upon entering the cell, and consequently inhibit their peptidyl prolyl cis-trans isomerase activities. 1 Instead instead ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 4 form form VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 tight tight ADJ JJ Degree=Pos _ _ _ _ 6 complexes complexe NOUN NNS Number=Plur _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 two two NUM CD NumType=Card _ _ _ _ 9 different different ADJ JJ Degree=Pos _ _ _ _ 10 classes class NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 abundant abundant ADJ JJ Degree=Pos _ _ _ _ 13 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 14 receptors receptor NOUN NNS Number=Plur _ _ _ _ 15 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 immunophilins immunophilin NOUN NNS Number=Plur _ _ _ _ 17 upon upon SCONJ IN _ _ _ _ _ 18 entering enter VERB VBG VerbForm=Ger _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 consequently consequently ADV RB _ _ _ _ _ 24 inhibit inhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 26 peptidyl peptidyl NOUN NN Number=Sing _ _ _ _ 27 prolyl prolyl NOUN NN Number=Sing _ _ _ _ 28 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 trans tran NOUN NNS Number=Plur _ _ _ _ 31 isomerase isomerase NOUN NN Number=Sing _ _ _ _ 32 activities activity NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3948 # text = The two structurally distinct immunophilin-drug complexes bind to, and inhibit, the phosphatase activity of calcineurin. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 structurally structurally ADV RB _ _ _ _ _ 4 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 5 immunophilin immunophilin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 drug drug NOUN NN Number=Sing _ _ _ _ 8 complexes complex NOUN NNS Number=Plur _ _ _ _ 9 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 to to ADP IN _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 inhibit inhibit NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3949 # text = Document 003003613 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003613 003003613 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3950 # text = Latent membrane protein 1 of Epstein-Barr virus interacts with JAK3 and activates 1 Latent Latent ADJ JJ Degree=Pos _ _ _ _ 2 membrane membrane NOUN NN Number=Sing _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 1 1 NUM CD NumType=Card _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 Barr Barr PROPN NNP Number=Sing _ _ _ _ 9 virus virus NOUN NN Number=Sing _ _ _ _ 10 interacts interact VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 JAK3 JAK3 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ # sent_id = 3951 # text = STAT proteins. 1 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 2 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3952 # text = Latent membrane protein 1 (LMP1) acts like a permanently activated receptor of the tumor necrosis factor (TNF)-receptor superfamily and is absolutely required for B cell immortalization by Epstein-Barr virus. 1 Latent Latent ADJ JJ Degree=Pos _ _ _ _ 2 membrane membrane NOUN NN Number=Sing _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 1 1 NUM CD NumType=Card _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 LMP1 Lmp1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 like like ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 permanently permanently ADV RB _ _ _ _ _ 12 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 tumor tumor NOUN NN Number=Sing _ _ _ _ 17 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 - - PUNCT : _ _ _ _ SpaceAfter=No 23 receptor receptor NOUN NN Number=Sing _ _ _ _ 24 superfamily superfamily ADV RB _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 absolutely absolutely ADV RB _ _ _ _ _ 28 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 B b ADJ JJ Degree=Pos _ _ _ _ 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 immortalization immortalization NOUN NN Number=Sing _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 Barr Barr PROPN NNP Number=Sing _ _ _ _ 37 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 3953 # text = Molecular and biochemical approaches demonstrated that LMP1 usurps cellular signaling pathways resulting in the induction of NF-kappaB and AP-1 via two C-terminal activating regions. 1 Molecular Molecular ADJ JJ Degree=Pos _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 4 approaches approach NOUN NNS Number=Plur _ _ _ _ 5 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ _ 8 usurps usurp VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 cellular celular ADJ JJ Degree=Pos _ _ _ _ 10 signaling signale NOUN NN Number=Sing _ _ _ _ 11 pathways pathway NOUN NNS Number=Plur _ _ _ _ 12 resulting result VERB VBG VerbForm=Ger _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 induction induction NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 via via ADP IN _ _ _ _ _ 25 two two NUM CD NumType=Card _ _ _ _ 26 C- c- NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 terminal terminal NOUN NN Number=Sing _ _ _ _ 28 activating activate VERB VBG VerbForm=Ger _ _ _ _ 29 regions region NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3954 # text = We demonstrate here that a third region encompassing a proline rich sequence within the 33 bp repetitive stretch of LMP1's C-terminus is required for the activation of Janus kinase 3 (JAK3). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 third third ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 7 region region NOUN NN Number=Sing _ _ _ _ 8 encompassing encompasse VERB VBG VerbForm=Ger _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 proline proline NOUN NN Number=Sing _ _ _ _ 11 rich rich ADJ JJ Degree=Pos _ _ _ _ 12 sequence sequence NOUN NN Number=Sing _ _ _ _ 13 within within ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 33 33 NUM CD NumType=Card _ _ _ _ 16 bp bp NOUN NN Number=Sing _ _ _ _ 17 repetitive repetitive ADJ JJ Degree=Pos _ _ _ _ 18 stretch stretch NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 LMP LMP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 1's 1' PART POS _ _ _ _ _ 22 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 terminus terminus NOUN NN Number=Sing _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 Janus Janus PROPN NNP Number=Sing _ _ _ _ 32 kinase kinase NOUN NN Number=Sing _ _ _ _ 33 3 3 NUM CD NumType=Card _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 JAK3 JAK3 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 3955 # text = The interaction of LMP1 and JAK3 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 interaction interaction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 LMP1 LMP1 NUM CD NumType=Card _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 JAK3 JAK3 NUM CD NumType=Card _ _ _ _ # sent_id = 3956 # text = leads to the enhanced tyrosine auto/transphosphorylation of JAK3 within minutes after crosslinking of a conditional NGF-R:LMP1 chimera and is a prerequisite for the activation of STAT transcription factors. 1 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 6 auto auto NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 transphosphorylation transphosphorylation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 JAK3 JAK3 NOUN NN Number=Sing _ _ _ _ 11 within within ADP IN _ _ _ _ _ 12 minutes minute NOUN NNS Number=Plur _ _ _ _ 13 after after SCONJ IN _ _ _ _ _ 14 crosslinking crosslinking VERB VBG VerbForm=Ger _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 conditional conditional ADJ JJ Degree=Pos _ _ _ _ 18 NGF NGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 -R:LMP1 -R:LMP1 NUM CD NumType=Card _ _ _ _ 20 chimera chimera NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 prerequisite prerequisite NOUN NN Number=Sing _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 STAT Stat NOUN NN Number=Sing _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ _ 31 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 3957 # text = These results reveal a novel activating region in the LMP1 C-terminus and identify the JAK/STAT pathway as a target of this viral integral membrane protein in B cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 reveal reveal VERB VB VerbForm=Inf _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 novel novel NOUN NN Number=Sing _ _ _ _ 6 activating activat VERB VBG VerbForm=Ger _ _ _ _ 7 region region NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ _ 11 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 terminus terminus NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 identify identify VERB VB VerbForm=Inf _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 JAK JAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 / / PUNCT , _ _ _ _ SpaceAfter=No 19 STAT Stat PROPN NNP Number=Sing _ _ _ _ 20 pathway pathway NOUN NN Number=Sing _ _ _ _ 21 as as ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 target target NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 26 viral viral ADJ JJ Degree=Pos _ _ _ _ 27 integral integral ADJ JJ Degree=Pos _ _ _ _ 28 membrane membrane NOUN NN Number=Sing _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 B b ADJ JJ Degree=Pos _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3958 # text = Document 003003614 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003614 003003614 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3959 # text = Mutation of Jak3 in a patient with SCID: essential role of Jak3 in lymphoid development. 1 Mutation Mutation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Jak3 Jak3 NUM CD NumType=Card _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 patient patient NOUN NN Number=Sing _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 SCID Scid NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 : : PUNCT : _ _ _ _ _ 10 essential essential ADJ JJ Degree=Pos _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Jak3 Jak3 NUM CD NumType=Card _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 16 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3960 # text = Males with X-linked severe combined immunodeficiency (XSCID) have defects in the common cytokine receptor gamma chain (gamma c) gene that encodes a shared, essential component of the receptors of interleukin-2 (IL-2), IL-4, IL-7, IL-9, and IL-15. 1 Males male NOUN NNS Number=Plur _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 X X PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 severe severe ADJ JJ Degree=Pos _ _ _ _ 7 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 XSCID XSCID PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 defects defect NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 common common ADJ JJ Degree=Pos _ _ _ _ 17 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 18 receptor receptor NOUN NN Number=Sing _ _ _ _ 19 gamma gamma NOUN NN Number=Sing _ _ _ _ 20 chain chain NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 gamma gamma NOUN NN Number=Sing _ _ _ _ 23 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 that that PRON WDT PronType=Rel _ _ _ _ 27 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 shared share VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 essential essential ADJ JJ Degree=Pos _ _ _ _ 32 component component NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 receptors receptor NOUN NNS Number=Plur _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 2 2 NUM CD NumType=Card _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 53 , , PUNCT , _ _ _ _ _ 54 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 55 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 56 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 57 , , PUNCT , _ _ _ _ _ 58 and and CCONJ CC _ _ _ _ _ 59 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 60 - - SYM SYM _ _ _ _ SpaceAfter=No 61 15 15 NUM CD NumType=Card _ _ _ SpaceAfter=No 62 . . PUNCT . _ _ _ _ _ # sent_id = 3961 # text = The Janus family tyrosine kinase Jak3 is the only signaling molecule known to be associated with gamma c, so it was hypothesized that defects in Jak3 might cause an XSCID-like phenotype. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Janus Janus PROPN NNP Number=Sing _ _ _ _ 3 family family NOUN NN Number=Sing _ _ _ _ 4 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ _ 6 Jak3 Jak3 NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 only only ADJ JJ Degree=Pos _ _ _ _ 10 signaling signaling NOUN NN Number=Sing _ _ _ _ 11 molecule molecule NOUN NN Number=Sing _ _ _ _ 12 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 gamma gamma NOUN NN Number=Sing _ _ _ _ 18 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 so so ADV RB _ _ _ _ _ 21 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 hypothesized hypothesize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 defects defect NOUN NNS Number=Plur _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 Jak3 Jak3 NOUN NN Number=Sing _ _ _ _ 28 might might AUX MD VerbForm=Fin _ _ _ _ 29 cause cause VERB VB VerbForm=Inf _ _ _ _ 30 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 XSCID XSCID NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 like like ADJ JJ Degree=Pos _ _ _ _ 34 phenotype phenotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 3962 # text = A girl with immunological features indistinguishable from those of XSCID was therefore selected for analysis. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 girl girl NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 immunological immunological ADJ JJ Degree=Pos _ _ _ _ 5 features feature NOUN NNS Number=Plur _ _ _ _ 6 indistinguishable indistinguishable ADJ JJ Degree=Pos _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 XSCID XSCID PROPN NNP Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 therefore therefore ADV RB _ _ _ _ _ 13 selected select VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 3963 # text = An Epstein-Barr virus (EBV)-transformed cell line derived from her lymphocytes had normal gamma c expression but lacked Jak3 protein and had greatly diminished Jak3 messenger RNA. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 Barr Barr PROPN NNP Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 - - PUNCT : _ _ _ _ SpaceAfter=No 10 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 line line NOUN NN Number=Sing _ _ _ _ 13 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 her she PRON PRP$ Gender=Fem|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 17 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 normal normal ADJ JJ Degree=Pos _ _ _ _ 19 gamma gamma NOUN NN Number=Sing _ _ _ _ 20 c c NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 lacked lack VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 Jak3 Jak3 NUM CD NumType=Card _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 greatly greatly ADV RB _ _ _ _ _ 29 diminished diminish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 Jak3 Jak3 NUM CD NumType=Card _ _ _ _ 31 messenger messenger NOUN NN Number=Sing _ _ _ _ 32 RNA RNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3964 # text = Sequencing revealed a different mutation on each allele: a single nucleotide insertion resulting in a frame shift and premature termination in the Jak3 JH4 domain and a nonsense mutation in the Jak3 JH2 domain. 1 Sequencing Sequencing PROPN NNP Number=Sing _ _ _ _ 2 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 different different ADJ JJ Degree=Pos _ _ _ _ 5 mutation mutation NOUN NN Number=Sing _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 each each DET DT _ _ _ _ _ 8 allele allele NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 : : PUNCT : _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 single single ADJ JJ Degree=Pos _ _ _ _ 12 nucleotide nucleotide NOUN NN Number=Sing _ _ _ _ 13 insertion insertion NOUN NN Number=Sing _ _ _ _ 14 resulting result VERB VBG VerbForm=Ger _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 frame frame NOUN NN Number=Sing _ _ _ _ 18 shift shift NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 premature premature ADJ JJ Degree=Pos _ _ _ _ 21 termination termination NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 Jak3 Jak3 NUM CD NumType=Card _ _ _ _ 25 JH4 JH4 NUM CD NumType=Card _ _ _ _ 26 domain domain NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 nonsense nonsense NOUN NN Number=Sing _ _ _ _ 30 mutation mutation NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 Jak3 Jak3 NUM CD NumType=Card _ _ _ _ 34 JH2 JH2 NUM CD NumType=Card _ _ _ _ 35 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 3965 # text = The lack of Jak3 expression correlated with impaired B cell signaling, as demonstrated by the inability of IL-4 to activate Stat6 in the EBV-transformed cell line from the patient. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 lack lack NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Jak3 Jak3 NUM CD NumType=Card _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 impaired impaire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 as as SCONJ IN _ _ _ _ _ 14 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 inability inability NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 4 4 NUM CD NumType=Card _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 activate activate VERB VB VerbForm=Inf _ _ _ _ 24 Stat6 stat6 NUM CD NumType=Card _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 line line NOUN NN Number=Sing _ _ _ _ 32 from from ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 patient patient NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 3966 # text = These observations indicate that the functions of gamma c are dependent on Jak3 and that Jak3 is essential for lymphoid development and signaling. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 functions function NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 gamma gamma NOUN NN Number=Sing _ _ _ _ 9 c c NOUN NN Number=Sing _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 Jak3 Jak3 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 Jak3 Jak3 NOUN NN Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 essential essential ADJ JJ Degree=Pos _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 21 development development NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3967 # text = Document 003003618 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003618 003003618 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3968 # text = Minimally modified low density lipoprotein-induced inflammatory responses in endothelial cells are mediated by cyclic adenosine monophosphate. 1 Minimally Minimally ADV RB _ _ _ _ _ 2 modified modify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 low low ADJ JJ Degree=Pos _ _ _ _ 4 density density NOUN NN Number=Sing _ _ _ _ 5 lipoprotein-induced lipoprotein-induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 7 responses response NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 cyclic cyclic ADJ JJ Degree=Pos _ _ _ _ 15 adenosine adenosine NOUN NN Number=Sing _ _ _ _ 16 monophosphate monophosphate NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3969 # text = We have previously shown that minimally oxidized LDL (MM-LDL) activated endothelial cells to increase their interaction with monocytes but not neutrophils, inducing monocyte but not neutrophil binding and synthesis of monocyte chemotactic protein-1 and monocyte colony-stimulating factor (M-CSF). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 minimally minimally ADV RB _ _ _ _ _ 7 oxidized oxidize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 LDL LDL PROPN NNP Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 MM mm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 LDL LDL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 increase increase VERB VB VerbForm=Inf _ _ _ _ 19 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 interaction interaction NOUN NN Number=Sing _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 23 but but CCONJ CC _ _ _ _ _ 24 not not ADV RB _ _ _ _ _ 25 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 28 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 29 but but CCONJ CC _ _ _ _ _ 30 not not ADV RB _ _ _ _ _ 31 neutrophil neutrophil SCONJ IN _ _ _ _ _ 32 binding binding VERB VBG VerbForm=Ger _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 monocyte monocyte ADJ JJ Degree=Pos _ _ _ _ 37 chemotactic chemotactic ADJ JJ Degree=Pos _ _ _ _ 38 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 1 1 NUM CD NumType=Card _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 43 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 46 factor factor NOUN NN Number=Sing _ _ _ _ 47 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 48 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 CSF Csf NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 3970 # text = In the present studies we have examined the signaling pathways by which this monocyte-specific response is induced. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 signaling signaling NOUN NN Number=Sing _ _ _ _ 10 pathways pathway NOUN NNS Number=Plur _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 14 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 response response NOUN NN Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 3971 # text = Both induction of monocyte binding and mRNA levels for M-CSF by MM-LDL were not inhibited in protein kinase C-depleted endothelial cells. 1 Both both DET DT _ _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 5 binding binding VERB VBG VerbForm=Ger _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 mRNA mRNa ADJ JJ Degree=Pos _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 M m PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 CSF CSF PROPN NNP Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 MM mm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 LDL LDL PROPN NNP Number=Sing _ _ _ _ 17 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 not not PART RB _ _ _ _ _ 19 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ _ 22 kinase kinase NOUN NN Number=Sing _ _ _ _ 23 C c PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 depleted deplet VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3972 # text = A number of our studies indicate that cAMP is the second messenger for the effects of MM-LDL cited above. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 number number NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 5 studies study NOUN NNS Number=Plur _ _ _ _ 6 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 cAMP camp PROPN NNP Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 12 messenger messenger NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 effects effect NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 MM mm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 LDL LDL PROPN NNP Number=Sing _ _ _ _ 20 cited cite VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 above above ADV RB _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3973 # text = Incubation of endothelial cells with MM-LDL caused a 173% increase in intracellular cAMP levels. 1 Incubation incubation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 MM mm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 LDL LDL PROPN NNP Number=Sing _ _ _ _ 9 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 173 173 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 % % SYM NN Number=Sing _ _ _ _ 13 increase increase NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 16 cAMP camp NOUN NN Number=Sing _ _ _ _ 17 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 3974 # text = Agents which increased cAMP levels, including cholera toxin, pertussis toxin, dibutyryl cAMP, and isoproterenol mimicked the actions of MM-LDL. Agents which elevated cAMP were also shown to activate NF kappa B, suggesting a role for this transcription factor in activation of monocyte-endothelial interactions. 1 Agents agent NOUN NNS Number=Plur _ _ _ _ 2 which which PRON WDT PronType=Rel _ _ _ _ 3 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 cAMP camp NOUN NN Number=Sing _ _ _ _ 5 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 including include VERB VBG VerbForm=Ger _ _ _ _ 8 cholera cholera NOUN NN Number=Sing _ _ _ _ 9 toxin toxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 pertussis pertussis NOUN NN Number=Sing _ _ _ _ 12 toxin toxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 dibutyryl dibutyryl NOUN NN Number=Sing _ _ _ _ 15 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 isoproterenol isoproterenol ADV RB _ _ _ _ _ 19 mimicked mimick VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 actions action NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 MM mm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 LDL. LDL. PROPN NNP Number=Sing _ _ _ _ 26 Agents Agents PROPN NNPS Number=Plur _ _ _ _ 27 which which PRON WDT PronType=Rel _ _ _ _ 28 elevated elevate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 cAMP camp NOUN NN Number=Sing _ _ _ _ 30 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 also also ADV RB _ _ _ _ _ 32 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 to to PART TO _ _ _ _ _ 34 activate activate VERB VB VerbForm=Inf _ _ _ _ 35 NF NF ADP RP _ _ _ _ _ 36 kappa kappa NOUN NN Number=Sing _ _ _ _ 37 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 40 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 41 role role NOUN NN Number=Sing _ _ _ _ 42 for for ADP IN _ _ _ _ _ 43 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 44 transcription transcription NOUN NN Number=Sing _ _ _ _ 45 factor factor NOUN NN Number=Sing _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 activation activation NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT , _ _ _ _ SpaceAfter=No 51 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 52 interactions interaction NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 3975 # text = Although endothelial leukocyte adhesion molecule (ELAM) mRNA synthesis can be regulated by NF kappa B, ELAM was not expressed and ELAM mRNA was only slightly elevated in response to MM-LDL. We present evidence that induction of neutrophil binding by LPS is actually suppressed by agents that elevated cAMP levels. 1 Although although SCONJ IN _ _ _ _ _ 2 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 3 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 4 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 5 molecule molecule NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 ELAM ELAM NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 10 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 11 can can AUX MD VerbForm=Fin _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ _ 16 kappa kappa PROPN NNP Number=Sing _ _ _ _ 17 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 ELAM ELAM PROPN NNP Number=Sing _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 ELAM ELAM PROPN NNP Number=Sing _ _ _ _ 25 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 only only ADV RB _ _ _ _ _ 28 slightly slightly ADV RB _ _ _ _ _ 29 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 response response NOUN NN Number=Sing _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 MM mm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 LDL LDL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ 37 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 38 present present ADJ JJ Degree=Pos _ _ _ _ 39 evidence evidence NOUN NN Number=Sing _ _ _ _ 40 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 41 induction induction NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 neutrophil neutrophil SCONJ IN _ _ _ _ _ 44 binding binding VERB VBG VerbForm=Ger _ _ _ _ 45 by by ADP IN _ _ _ _ _ 46 LPS LPS PROPN NNP Number=Sing _ _ _ _ 47 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 48 actually actually ADV RB _ _ _ _ _ 49 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 50 by by ADP IN _ _ _ _ _ 51 agents agent NOUN NNS Number=Plur _ _ _ _ 52 that that PRON WDT PronType=Rel _ _ _ _ 53 elevated elevate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 54 cAMP camp NOUN NN Number=Sing _ _ _ _ 55 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3976 # text = Document 003003620 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003620 003003620 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3977 # text = The role of shared receptor motifs and common 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 shared share VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ _ 6 motifs motif NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 common common ADJ JJ Degree=Pos _ _ _ _ # sent_id = 3978 # text = Stat proteins in the generation of cytokine pleiotropy and redundancy by IL-2, IL-4, IL-7, IL-13, and IL-15. 1 Stat Stat VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 proteins protein NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 generation generation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 8 pleiotropy pleiotropy NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 redundancy redundancy NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 -7 -7 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - SYM SYM _ _ _ _ SpaceAfter=No 29 15 15 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3979 # text = To understand the molecular bases for cytokine redundancy and pleiotropy, we have compared the Stat proteins activated in peripheral blood lymphocytes (PBLs) by cytokines with shared and distinct actions. 1 To to PART TO _ _ _ _ _ 2 understand understand VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 5 bases basis NOUN NNS Number=Plur _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 8 redundancy redundancy NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 pleiotropy pleiotropy NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 13 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 Stat Stat PROPN NNP Number=Sing _ _ _ _ 17 proteins protein NOUN NNS Number=Plur _ _ _ _ 18 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 21 blood blood NOUN NN Number=Sing _ _ _ _ 22 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 PBLs PBL NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 shared share ADJ JJ Degree=Pos _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 32 actions action NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3980 # text = Interleukin-2 (IL-2) rapidly activated Stat5 in fresh PBL, and Stat3 and Stat5 in preactivated PBL. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 X LS _ _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 rapidly rapidly ADV RB _ _ _ _ _ 10 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 Stat5 Stat5 NUM CD NumType=Card _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 fresh fresh ADJ JJ Degree=Pos _ _ _ _ 14 PBL PBL NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 Stat3 Stat3 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 Stat5 Stat5 NUM CD NumType=Card _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 preactivated preactivate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 PBL pBl NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 3981 # text = IL-7 and IL-15 induced the same complexes as IL-2, a feature explained by the existence of similar tyrosine-phosphorylated motifs in the cytoplasmic domains of IL-2R beta and IL-7R that can serve as docking sites for 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 7 7 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 15 15 NUM CD NumType=Card _ _ _ _ 8 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 same same ADJ JJ Degree=Pos _ _ _ _ 11 complexes complexe NOUN NNS Number=Plur _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 feature feature NOUN NN Number=Sing _ _ _ _ 19 explained explain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 existence existence NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 similar similar ADJ JJ Degree=Pos _ _ _ _ 25 tyrosine tyrosine NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 motifs motif NOUN NNS Number=Plur _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 32 domains domains NOUN NNS Number=Plur _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 2R 2R PROPN NNP Number=Sing _ _ _ _ 37 beta beta PROPN NNP Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 7R 7r PROPN NNP Number=Sing _ _ _ _ 42 that that PRON WDT PronType=Rel _ _ _ _ 43 can can AUX MD VerbForm=Fin _ _ _ _ 44 serve serve VERB VB VerbForm=Inf _ _ _ _ 45 as as SCONJ IN _ _ _ _ _ 46 docking docke VERB VBG VerbForm=Ger _ _ _ _ 47 sites site NOUN NNS Number=Plur _ _ _ _ 48 for for ADP IN _ _ _ _ _ # sent_id = 3982 # text = Stat proteins. 1 Stat Stat NOUN NN Number=Sing _ _ _ _ 2 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 . . PUNCT . _ _ _ _ _ # sent_id = 3983 # text = IL-13 1 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -13 -13 NUM CD NumType=Card _ _ _ _ # sent_id = 3984 # text = Induced the same complexes as IL-4, a finding explained by our studies implicating IL-4R as a shared component of the receptors. 1 Induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 same same ADJ JJ Degree=Pos _ _ _ _ 4 complexes complexe NOUN NNS Number=Plur _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 finding finding NOUN NN Number=Sing _ _ _ _ 12 explained explain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 15 studies study NOUN NNS Number=Plur _ _ _ _ 16 implicating implicate VERB VBG VerbForm=Ger _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 4R 4R PROPN NNP Number=Sing _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 shared share VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 component component NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 3985 # text = These studies demonstrate that a single cytokine can activate different combinations of Stat proteins under different physiological conditions, and also indicate two mechanisms by which distinct cytokines can activate the same Stat protein. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 single single ADJ JJ Degree=Pos _ _ _ _ 7 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 activate activate VERB VB VerbForm=Inf _ _ _ _ 10 different different ADJ JJ Degree=Pos _ _ _ _ 11 combinations combination NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Stat Stat PROPN NNP Number=Sing _ _ _ _ 14 proteins protein NOUN NNS Number=Plur _ _ _ _ 15 under under ADP IN _ _ _ _ _ 16 different different ADJ JJ Degree=Pos _ _ _ _ 17 physiological physiological ADJ JJ Degree=Pos _ _ _ _ 18 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 also also ADV RB _ _ _ _ _ 22 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 two two NUM CD NumType=Card _ _ _ _ 24 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 which which PRON WDT PronType=Rel _ _ _ _ 27 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 28 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 29 can can AUX MD VerbForm=Fin _ _ _ _ 30 activate activate VERB VB VerbForm=Inf _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 same same ADJ JJ Degree=Pos _ _ _ _ 33 Stat Stat NOUN NN Number=Sing _ _ _ _ 34 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3986 # text = Document 003003622 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003622 003003622 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 3987 # text = Identification of essential GATA and Ets binding motifs within the promoter of the platelet glycoprotein 1 Identification identification NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 essential essential ADJ JJ Degree=Pos _ _ _ _ 4 GATA GATA PROPN NNP Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 Ets ets PROPN NNPS Number=Plur _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 motifs motif NOUN NNS Number=Plur _ _ _ _ 9 within within ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 platelet platelet NOUN NN Number=Sing _ _ _ _ 15 glycoprotein glycoprotein NOUN NN Number=Sing _ _ _ _ # sent_id = 3988 # text = Ib alpha gene. 1 Ib Ib VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 alpha alpha ADP IN _ _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 3989 # text = Platelet glycoprotein (GP) Ib-IX-V is a multisubunit adhesion receptor that supports platelet attachment to thrombogenic surfaces at sites of vascular injury. 1 Platelet Platelet NOUN NN Number=Sing _ _ _ _ 2 glycoprotein glycoprotein NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 GP GP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 Ib Ib PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 IX IX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 V V PROPN NNP Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 multisubunit multisubunit NOUN NN Number=Sing _ _ _ _ 14 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 15 receptor receptor NOUN NN Number=Sing _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 supports support VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 platelet platelet NOUN NN Number=Sing _ _ _ _ 19 attachment attachment NOUN NN Number=Sing _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 thrombogenic thrombogenic ADJ JJ Degree=Pos _ _ _ _ 22 surfaces surface NOUN NNS Number=Plur _ _ _ _ 23 at at ADP IN _ _ _ _ _ 24 sites site NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 27 injury injury NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 3990 # text = The congenital absence of the receptor results in a bleeding disorder associated with "giant" platelets, a condition linking the expression of the complex to platelet morphogenesis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 congenital congenital ADJ JJ Degree=Pos _ _ _ _ 3 absence absence NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 results result NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 bleeding bleeding VERB VBG VerbForm=Ger _ _ _ _ 11 disorder disorder NOUN NN Number=Sing _ _ _ _ 12 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 " " PUNCT `` _ _ _ _ SpaceAfter=No 15 giant giant NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 " " PUNCT '' _ _ _ _ _ 17 platelets platelet NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 condition condition NOUN NN Number=Sing _ _ _ _ 21 linking link VERB VBG VerbForm=Ger _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 complex complex NOUN NN Number=Sing _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 platelet platelet VERB VB VerbForm=Inf _ _ _ _ 29 morphogenesis morphogenesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 3991 # text = To understand better the expression of the GP 1 To to PART TO _ _ _ _ _ 2 understand understand VERB VB VerbForm=Inf _ _ _ _ 3 better better ADV RBR Degree=Cmp _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 GP GP PROPN NNP Number=Sing _ _ _ _ # sent_id = 3992 # text = Ib-IX-V complex, studies were undertaken to define the essential genetic elements supporting the expression of the alpha-subunit of the complex (GP Ib alpha). 1 Ib Ib PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 IX IX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 V V PROPN NNP Number=Sing _ _ _ _ 6 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 studies study NOUN NNS Number=Plur _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 undertaken undertaken ADJ JJ Degree=Pos _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 define define VERB VB VerbForm=Inf _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 essential essential ADJ JJ Degree=Pos _ _ _ _ 15 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 16 elements element NOUN NNS Number=Plur _ _ _ _ 17 supporting support VERB VBG VerbForm=Ger _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 subunit subunit NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 complex complex NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 GP GP PROPN NNP Number=Sing _ _ _ _ 30 Ib Ib PROPN NNP Number=Sing _ _ _ _ 31 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3993 # text = GP 1 GP Gp SYM NFP _ _ _ _ _ # sent_id = 3994 # text = Ib alpha promoter activity was evaluated by transfection of human erythroleukemia cells with reporter plasmids coding for the enzyme, luciferase. 1 Ib Ib X LS _ _ _ _ _ 2 alpha alpha X FW Foreign=Yes _ _ _ _ 3 promoter promoter X GW _ _ _ _ _ 4 activity activity NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 evaluated evaluate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 transfection transfection NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 erythroleukemia erythroleukemia NOUN NN Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 reporter reporter NOUN NN Number=Sing _ _ _ _ 15 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 16 coding cod VERB VBG VerbForm=Ger _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 enzyme enzyme NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 luciferase luciferase NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 3995 # text = Studies were initiated with a fragment extending 2,738 nucleotides 5' to the transcription start site and lead to the identification of 253 nucleotides retaining full promoter activity in human erythroleukemia cells. 1 Studies study NOUN NNS Number=Plur _ _ _ _ 2 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 initiated initiate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 fragment fragment NOUN NN Number=Sing _ _ _ _ 7 extending extend VERB VBG VerbForm=Ger _ _ _ _ 8 2,738 2,738 NUM CD NumType=Card _ _ _ _ 9 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 10 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ' ' NOUN NNS Number=Plur _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 start start NOUN NN Number=Sing _ _ _ _ 16 site site NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 lead lead VERB VB VerbForm=Inf _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 identification identification NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 253 253 NUM CD NumType=Card _ _ _ _ 24 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 25 retaining retain VERB VBG VerbForm=Ger _ _ _ _ 26 full full ADJ JJ Degree=Pos _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 erythroleukemia erythroleukemia NOUN NN Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 3996 # text = In cells of nonhematopoietic lineage, human endothelial and HeLa cells, the GP Ib alpha promoter activity was no greater than background levels obtained with promoterless constructs. 1 In in ADP IN _ _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 nonhematopoietic nonhematopoietic ADJ JJ Degree=Pos _ _ _ _ 5 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 HeLa Hela ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 GP GP PROPN NNP Number=Sing _ _ _ _ 15 Ib Ib PROPN NNP Number=Sing _ _ _ _ 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 no no ADV RB _ _ _ _ _ 21 greater greater ADJ JJR Degree=Cmp _ _ _ _ 22 than than ADP IN _ _ _ _ _ 23 background background NOUN NN Number=Sing _ _ _ _ 24 levels level NOUN NNS Number=Plur _ _ _ _ 25 obtained obtain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 promoterless promoterless ADJ JJ Degree=Pos _ _ _ _ 28 constructs constructs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 3997 # text = Gel shift assays and site-directed mutagenesis studies defined essential GATA and Ets binding motifs 93 and 150 nucleotides upstream of the transcription start site, a finding which further substantiates these elements as important determinants of megakaryocytic gene expression. 1 Gel gel NOUN NN Number=Sing _ _ _ _ 2 shift shift NOUN NN Number=Sing _ _ _ _ 3 assays assay NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ _ 9 studies study NOUN NNS Number=Plur _ _ _ _ 10 defined define VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 essential essential ADJ JJ Degree=Pos _ _ _ _ 12 GATA GATa NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 Ets Et NOUN NNS Number=Plur _ _ _ _ 15 binding bind VERB VBG VerbForm=Ger _ _ _ _ 16 motifs motif NOUN NNS Number=Plur _ _ _ _ 17 93 93 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 150 150 NUM CD NumType=Card _ _ _ _ 20 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 21 upstream upstream NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 start start NOUN NN Number=Sing _ _ _ _ 26 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 finding finding NOUN NN Number=Sing _ _ _ _ 30 which which PRON WDT PronType=Rel _ _ _ _ 31 further further ADV RB _ _ _ _ _ 32 substantiates substantiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 34 elements element NOUN NNS Number=Plur _ _ _ _ 35 as as ADP IN _ _ _ _ _ 36 important important ADJ JJ Degree=Pos _ _ _ _ 37 determinants determinant NOUN NNS Number=Plur _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 40 gene gene NOUN NN Number=Sing _ _ _ _ 41 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 3998 # text = The results define essential cis-acting elements responsible for the expression of GP Ib alpha and provide insights into molecular events coinciding with the release of normal platelets into the bloodstream. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 define define VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 essential essential ADJ JJ Degree=Pos _ _ _ _ 5 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 -acting -act VERB VBG VerbForm=Ger _ _ _ _ 7 elements element NOUN NNS Number=Plur _ _ _ _ 8 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 GP GP PROPN NNP Number=Sing _ _ _ _ 14 Ib Ib PROPN NNP Number=Sing _ _ _ _ 15 alpha alpha PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 provide provide VERB VB VerbForm=Inf _ _ _ _ 18 insights insight NOUN NNS Number=Plur _ _ _ _ 19 into into ADP IN _ _ _ _ _ 20 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 21 events event NOUN NNS Number=Plur _ _ _ _ 22 coinciding coincide VERB VBG VerbForm=Ger _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 release release NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 normal normal ADJ JJ Degree=Pos _ _ _ _ 28 platelets platelet NOUN NNS Number=Plur _ _ _ _ 29 into into ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 bloodstream bloodstream NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 3999 # text = Document 003003623 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003623 003003623 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4000 # text = Protein-tyrosine kinase activation is required for lipopolysaccharide induction of interleukin 1beta and NFkappaB activation, but not NFkappaB nuclear translocation. 1 Protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 4 kinase kinase NOUN NN Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 interleukin interleukin ADV RB _ _ _ _ _ 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 beta beta NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 NFkappaB Nfkappab NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 not not ADV RB _ _ _ _ _ 21 NFkappaB Nfkappab ADV RB _ _ _ _ _ 22 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 23 translocation translocation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4001 # text = In human monocytes, interleukin 1beta protein production and steady state mRNA levels are increased in response to lipopolysaccharide, predominantly as a result of increased transcription of the interleukin 1beta gene. 1 In in ADP IN _ _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 interleukin interleukin ADJ JJ Degree=Pos _ _ _ _ 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 beta beta NOUN NN Number=Sing _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 production production NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 steady steady ADJ JJ Degree=Pos _ _ _ _ 12 state state NOUN NN Number=Sing _ _ _ _ 13 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 14 levels level NOUN NNS Number=Plur _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 response response NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 predominantly predominantly ADV RB _ _ _ _ _ 23 as as ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 result result NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 interleukin interleukin ADJ JJ Degree=Pos _ _ _ _ 32 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 beta beta NOUN NN Number=Sing _ _ _ _ 34 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4002 # text = Expression of interleukin 1beta and other cytokines, such as interleukin 6 and tumor necrosis factor alpha, has been shown to be dependent on the activation of the transcription factor, NFkappaB. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 interleukin interleukin ADJ JJ Degree=Pos _ _ _ _ 4 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 beta beta NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 other other ADJ JJ Degree=Pos _ _ _ _ 8 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 such such ADJ JJ Degree=Pos _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 interleukin interleukin ADJ JJ Degree=Pos _ _ _ _ 13 6 6 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 tumor tumor NOUN NN Number=Sing _ _ _ _ 16 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 22 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 be be AUX VB VerbForm=Inf _ _ _ _ 25 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ _ 32 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4003 # text = Since recent studies have shown that lipopolysaccharide-induced tyrosine kinase activation is not required for NFkappaB nuclear translocation, we sought to determine whether NFkappaB translocated in the absence of tyrosine kinase activity was active in stimulating transcription. 1 Since since ADP IN _ _ _ _ _ 2 recent recent ADJ JJ Degree=Pos _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 translocation translocation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 22 sought seek VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 determine determine VERB VB VerbForm=Inf _ _ _ _ 25 whether whether SCONJ IN _ _ _ _ _ 26 NFkappaB Nfkappab PROPN NNP Number=Sing _ _ _ _ 27 translocated translocate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 absence absence NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 33 kinase kinase NOUN NN Number=Sing _ _ _ _ 34 activity activity NOUN NN Number=Sing _ _ _ _ 35 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 36 active active ADJ JJ Degree=Pos _ _ _ _ 37 in in SCONJ IN _ _ _ _ _ 38 stimulating stimulate VERB VBG VerbForm=Ger _ _ _ _ 39 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 4004 # text = We have found that, in the human pro-monocytic cell line, THP-1, the lipopolysaccharide-induced expression of interleukin 1beta is dependent on tyrosine kinase activation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 pro-monocytic pro-monocytic ADJ JJ Degree=Pos _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 interleukin interleukin ADJ JJ Degree=Pos _ _ _ _ 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 beta beta NOUN NN Number=Sing _ _ _ _ 26 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 28 on on ADP IN _ _ _ _ _ 29 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 30 kinase kinase NOUN NN Number=Sing _ _ _ _ 31 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4005 # text = Tyrosine kinases are not required for lipopolysaccharide-mediated nuclear translocation of NFkappaB. 1 Tyrosine Tyrosine NOUN NN Number=Sing _ _ _ _ 2 kinases kinase NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 translocation translocation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 4006 # text = However, in the absence of tyrosine kinase activity, the ability of NFkappaB to stimulate transcription is impaired. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 absence absence NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 8 kinase kinase NOUN NN Number=Sing _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 ability ability NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 impaired impaired ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4007 # text = This inhibition of transcription is specific for NFkappaB; in the absence of tyrosine kinase activity, AP-1-dependent transcription is enhanced. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 specific specific ADJ JJ Degree=Pos _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ; ; PUNCT , _ _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 absence absence NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 15 kinase kinase NOUN NN Number=Sing _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4008 # text = These results suggest that, while lipopolysaccharide-induced expression of inflammatory mediators requires tyrosine kinase activity, tyrosine kinase activity is not obligatory for lipopolysaccharide signal transduction. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 while while SCONJ IN _ _ _ _ _ 7 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 13 mediators mediator NOUN NNS Number=Plur _ _ _ _ 14 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 tyrosine tyrosine PRON PRP _ _ _ _ _ 16 kinase kinase NOUN NN Number=Sing _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 20 kinase kinase NOUN NN Number=Sing _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 not not PART RB _ _ _ _ _ 24 obligatory obligatory ADJ JJ Degree=Pos _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 27 signal signal NOUN NN Number=Sing _ _ _ _ 28 transduction transduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4009 # text = Document 003003626 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003626 003003626 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4010 # text = Cleavage of transcription factor SP1 by caspases during anti-IgM-induced B-cell apoptosis. 1 Cleavage Cleavage NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 SP1 Sp1 NUM CD NumType=Card _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 caspases caspase NOUN NNS Number=Plur _ _ _ _ 8 during during ADP IN _ _ _ _ _ 9 anti-IgM anti-IgM ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4011 # text = Apoptosis is instrumental in the processes generating the diversity of the B-cell repertoire. 1 Apoptosis Apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 instrumental instrumental ADJ JJ Degree=Pos _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 processes processe NOUN NNS Number=Plur _ _ _ _ 7 generating generate VERB VBG VerbForm=Ger _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 diversity diversity NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 repertoire repertoire NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4012 # text = Autoreactive B-cells are eliminated by anti-IgM crosslinking after encountering self-antigens, but precise mechanisms leading to B-cell apoptosis are still not well understood. 1 Autoreactive Autoreactive ADJ JJ Degree=Pos _ _ _ _ 2 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 eliminated eliminate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 anti anti X AFX _ _ _ _ SpaceAfter=No 9 -IgM -Igm ADJ JJ Degree=Pos _ _ _ _ 10 crosslinking crosslink NOUN NN Number=Sing _ _ _ _ 11 after after SCONJ IN _ _ _ _ _ 12 encountering encounter VERB VBG VerbForm=Ger _ _ _ _ 13 self self NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 antigens antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 precise precise ADJ JJ Degree=Pos _ _ _ _ 19 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 20 leading lead VERB VBG VerbForm=Ger _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 26 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 still still ADV RB _ _ _ _ _ 28 not not ADV RB _ _ _ _ _ 29 well well ADV RB Degree=Pos _ _ _ _ 30 understood understand VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4013 # text = We report here the cleavage of the transcription factor SP1 in the human Burkitt lymphoma cell line BL60 during anti-IgM-induced apoptosis. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 cleavage cleavage NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 SP1 SP1 NUM CD NumType=Card _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 Burkitt Burkitt PROPN NNP Number=Sing _ _ _ _ 15 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 line line NOUN NN Number=Sing _ _ _ _ 18 BL60 BL60 NUM CD NumType=Card _ _ _ _ 19 during during ADP IN _ _ _ _ _ 20 anti-IgM anti-IgM ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 induced induce ADJ JJ Degree=Pos _ _ _ _ 23 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4014 # text = Western blot analysis revealed two cleavage products of approximately 68 kDa and 45 kDa after induction of apoptosis. 1 Western western ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 two two NUM CD NumType=Card _ _ _ _ 6 cleavage cleavage NOUN NN Number=Sing _ _ _ _ 7 products product NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 approximately approximately ADV RB _ _ _ _ _ 10 68 68 NUM CD NumType=Card _ _ _ _ 11 kDa kDa PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 45 45 NUM CD NumType=Card _ _ _ _ 14 kDa kDa PROPN NNP Number=Sing _ _ _ _ 15 after after ADP IN _ _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 4015 # text = Cleavage could be completely inhibited by zDEVD-fmk, an inhibitor specific for caspase 3-like proteases. 1 Cleavage Cleavage NOUN NN Number=Sing _ _ _ _ 2 could could AUX MD VerbForm=Fin _ _ _ _ 3 be be AUX VB VerbForm=Inf _ _ _ _ 4 completely completely ADV RB _ _ _ _ _ 5 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 zDEVD zdevd NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 fmk fmk NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 caspase caspase NOUN NN Number=Sing _ _ _ _ 16 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 like like ADP IN _ _ _ _ _ 19 proteases protease NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4016 # text = In-vitro cleavage of recombinant SP1 by recombinant caspase 3 (CPP32) or caspase 7 (Mch 3) results in similar cleavage products as those observed in vivo. 1 In in ADP IN _ _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 vitro vitro NOUN NN Number=Sing _ _ _ _ 4 cleavage cleavage NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 7 SP1 Sp1 NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 10 caspase caspase NOUN NN Number=Sing _ _ _ _ 11 3 3 NUM CD NumType=Card _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 CPP32 Cpp32 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 or or CCONJ CC _ _ _ _ _ 16 caspase caspase NOUN NN Number=Sing _ _ _ _ 17 7 7 NUM CD NumType=Card _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 Mch Mch NOUN NN Number=Sing _ _ _ _ 20 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 results result NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 similar similar ADJ JJ Degree=Pos _ _ _ _ 25 cleavage cleavage NOUN NN Number=Sing _ _ _ _ 26 products product NOUN NNS Number=Plur _ _ _ _ 27 as as ADP IN _ _ _ _ _ 28 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 29 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4017 # text = Recombinant caspase 6 (Mch 2) primarily generates a 68-kDa cleavage product, as observed after calcium ionophore (CaI) induced B-cell apoptosis. 1 Recombinant Recombinant NOUN NN Number=Sing _ _ _ _ 2 caspase caspase NOUN NN Number=Sing _ _ _ _ 3 6 6 NUM CD NumType=Card _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 Mch Mch NOUN NN Number=Sing _ _ _ _ 6 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 primarily primarily ADV RB _ _ _ _ _ 9 generates generate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 68 68 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kDa kDa NOUN NN Number=Sing _ _ _ _ 14 cleavage cleavage NOUN NN Number=Sing _ _ _ _ 15 product product NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 as as SCONJ IN _ _ _ _ _ 18 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 after after ADP IN _ _ _ _ _ 20 calcium calcium NOUN NN Number=Sing _ _ _ _ 21 ionophore ionophore NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 CaI CaI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4018 # text = In contrast, caspase 1 (ICE) did not cleave SP1 in vitro. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 caspase caspase NOUN NN Number=Sing _ _ _ _ 5 1 1 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 ICE ice NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 cleave cleave VERB VB VerbForm=Inf _ _ _ _ 12 SP1 Sp1 NUM CD NumType=Card _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 4019 # text = The time course of SP1 cleavage during anti-IgM-induced apoptosis is paralleled by an increase of caspase activity measured by DEVD-p-nitroanilide (DEVD-pNA) cleavage. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 time time NOUN NN Number=Sing _ _ _ _ 3 course course NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 SP1 SP1 NUM CD NumType=Card _ _ _ _ 6 cleavage cleavage NOUN NN Number=Sing _ _ _ _ 7 during during ADP IN _ _ _ _ _ 8 anti-IgM anti-IgM ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 paralleled parallel VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 increase increase NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 caspase caspase NOUN NN Number=Sing _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ _ 20 measured measure VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 DEVD DEVD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 p-nitroanilide p-nitroanilide NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 DEVD Devd NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 pNA pNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 cleavage cleavage NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4020 # text = DNA band-shift assays revealed a decrease in the intensity of the full length SP1/DNA complex and an increase in the intensity of a smaller complex due to the binding of one SP1 cleavage product. 1 DNA dna NOUN NN Number=Sing _ _ _ _ 2 band band NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assays assays NOUN NNS Number=Plur _ _ _ _ 6 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 decrease decrease NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 intensity intensity NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 full full ADJ JJ Degree=Pos _ _ _ _ 15 length length NOUN NN Number=Sing _ _ _ _ 16 SP sp NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 1/ 1ith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 18 DNA dna NOUN NN Number=Sing _ _ _ _ 19 complex complex NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 increase increase NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 intensity intensity NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 smaller smaller ADJ JJR Degree=Cmp _ _ _ _ 29 complex complex NOUN NN Number=Sing _ _ _ _ 30 due due ADP IN _ _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 binding binding NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 one one NUM CD NumType=Card _ _ _ _ 36 SP1 SP1 NUM CD NumType=Card _ _ _ _ 37 cleavage cleavage NOUN NN Number=Sing _ _ _ _ 38 product product NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 4021 # text = By Edman sequencing we could identify a caspase 3 cleavage site after Asp584 (D584AQPQAGR), generating a 22-kDa C-terminal SP1 protein fragment which still contains the DNA binding site. 1 By by ADP IN _ _ _ _ _ 2 Edman Edman PROPN NNP Number=Sing _ _ _ _ 3 sequencing sequencing NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 could could AUX MD VerbForm=Fin _ _ _ _ 6 identify identify VERB VB VerbForm=Inf _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 caspase caspase NOUN NN Number=Sing _ _ _ _ 9 3 3 NUM CD NumType=Card _ _ _ _ 10 cleavage cleavage NOUN NN Number=Sing _ _ _ _ 11 site site NOUN NN Number=Sing _ _ _ _ 12 after after ADP IN _ _ _ _ _ 13 Asp584 Asp584 PROPN NNP Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 D584AQPQAGR D584AQPQAGR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 generating generate VERB VBG VerbForm=Ger _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 22 22 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kDa kDa NOUN NN Number=Sing _ _ _ _ 23 C- C- NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 terminal terminal NOUN NN Number=Sing _ _ _ _ 25 SP1 Sp1 NUM CD NumType=Card _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ _ 27 fragment fragment NOUN NN Number=Sing _ _ _ _ 28 which which PRON WDT PronType=Rel _ _ _ _ 29 still still ADV RB _ _ _ _ _ 30 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 DNA dna NOUN NN Number=Sing _ _ _ _ 33 binding binding VERB VBG VerbForm=Ger _ _ _ _ 34 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4022 # text = Our results show the cleavage of the human transcription factor SP1 in vivo and in vitro, underlining the central role of caspase 3-like proteases during the process of anti-IgM-induced apoptosis. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 cleavage cleavage NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 SP1 Sp1 NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 vivo vivo NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 underlining underlin VERB VBG VerbForm=Ger _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 central central ADJ JJ Degree=Pos _ _ _ _ 21 role role NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 caspase caspase NOUN NN Number=Sing _ _ _ _ 24 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 like like SCONJ IN _ _ _ _ _ 27 proteases protease NOUN NNS Number=Plur _ _ _ _ 28 during during ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 process process NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 anti-IgM anti-IgM ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4023 # text = Document 003003640 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003640 003003640 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4024 # text = [Effect of the regimen of kidney-tonifying and qi-invigorating on aging changes of glucocorticoid receptor] 1 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 Effect effect PROPN NNP Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 regimen regiman NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 kidney kidney NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 tonifying tonifying NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 qi qi NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 -invigorating -invigorat VERB VBG VerbForm=Ger _ _ _ _ 13 on on SCONJ IN _ _ _ _ _ 14 aging ag VERB VBG VerbForm=Ger _ _ _ _ 15 changes change NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 18 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 4025 # text = The plasma cortisol concentration and the sites of glucocorticoid receptor (GCR) in the peripheral lymphocytes were measured in 32 healthy aged persons and 13 young adults. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 plasma plasma NOUN NN Number=Sing _ _ _ _ 3 cortisol cortisol NOUN NN Number=Sing _ _ _ _ 4 concentration concentration NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 sites site NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 GCR GCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 17 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 18 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 measured measure VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 32 32 NUM CD NumType=Card _ _ _ _ 22 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 23 aged age ADJ JJ Degree=Pos _ _ _ _ 24 persons person NOUN NNS Number=Plur _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 13 13 NUM CD NumType=Card _ _ _ _ 27 young young ADJ JJ Degree=Pos _ _ _ _ 28 adults adult NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4026 # text = In animal experiment, GCR of spleen lymphocytic cell was also measured in 18 aged rats and 9 young rats. 1 In in ADP IN _ _ _ _ _ 2 animal animal NOUN NN Number=Sing _ _ _ _ 3 experiment experiment NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 GCR Gcr ADP IN _ _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 spleen spleen NUM CD NumType=Card _ _ _ _ 8 lymphocytic lymphocytic ADJ JJ Degree=Pos _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 also also ADV RB _ _ _ _ _ 12 measured measure VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 18 18 NUM CD NumType=Card _ _ _ _ 15 aged aged ADJ JJ Degree=Pos _ _ _ _ 16 rats rat NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 9 9 NUM CD NumType=Card _ _ _ _ 19 young young ADJ JJ Degree=Pos _ _ _ _ 20 rats rat NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4027 # text = The results showed that GCR was significantly lower in the aged persons or rats than that in the young while the plasma cortisol level didn't change with aging. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 GCR GCR PROPN NNP Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 significantly significantly ADV RB _ _ _ _ _ 8 lower lower ADJ JJR Degree=Cmp _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 aged aged ADJ JJ Degree=Pos _ _ _ _ 12 persons person NOUN NNS Number=Plur _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 rats rat NOUN NNS Number=Plur _ _ _ _ 15 than than ADP IN _ _ _ _ _ 16 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 young young NOUN NNS Number=Plur _ _ _ _ 20 while while SCONJ IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 plasma plasma NOUN NN Number=Sing _ _ _ _ 23 cortisol cortisol NOUN NN Number=Sing _ _ _ _ 24 level level NOUN NN Number=Sing _ _ _ _ 25 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 26 n't not PART RB _ _ _ _ _ 27 change change VERB VB VerbForm=Inf _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 aging aging NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4028 # text = So we think that GCR is more sensitive than the plasma cortisol level to reflect the aging change of the adrenal cortex function. 1 So so ADV RB _ _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 think think VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 GCR GCR PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 more more ADV RBR _ _ _ _ _ 8 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 9 than than ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 plasma plasma NOUN NN Number=Sing _ _ _ _ 12 cortisol cortisol NOUN NN Number=Sing _ _ _ _ 13 level level NOUN NN Number=Sing _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 reflect reflect VERB VB VerbForm=Inf _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 aging ag VERB VBG VerbForm=Ger _ _ _ _ 18 change change NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 adrenal adrenal ADJ JJ Degree=Pos _ _ _ _ 22 cortex cortex NOUN NN Number=Sing _ _ _ _ 23 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4029 # text = After the treatment with the regimen of Kidney-tonifying and Qi-invigorating, the GCR of the aged persons and rats was enhanced, and in this way, the function of the aged adrenal cortex was improved. 1 After after SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 treatment treatment NOUN NN Number=Sing _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 regimen regimen NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Kidney kidney PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 tonifying tonify VERB VBG VerbForm=Ger _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 Qi-invigorating Qi-invigorat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 GCR Gcr NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 aged aged ADJ JJ Degree=Pos _ _ _ _ 19 persons person NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 rats rat NOUN NNS Number=Plur _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 way way NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 function function NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 aged age ADJ JJ Degree=Pos _ _ _ _ 35 adrenal adrenal ADJ JJ Degree=Pos _ _ _ _ 36 cortex cortex NOUN NN Number=Sing _ _ _ _ 37 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 38 improved improve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4030 # text = Document 003003645 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003645 003003645 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4031 # text = Immune functions, clinical parameters and hormone receptor status in breast cancer patients. 1 Immune Immune ADJ JJ Degree=Pos _ _ _ _ 2 functions function NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 5 parameters parameter NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 hormone hormone NOUN NN Number=Sing _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 status status NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 breast breast NOUN NN Number=Sing _ _ _ _ 12 cancer cancer NOUN NN Number=Sing _ _ _ _ 13 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4032 # text = We have carried out a detailed analysis of the cellular immune functions of breast cancer patients in comparison with healthy controls. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 carried carry VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 out out ADP RP _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 detailed detailed ADJ JJ Degree=Pos _ _ _ _ 7 analysis analysis NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 11 immune immune ADJ JJ Degree=Pos _ _ _ _ 12 functions function NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 breast breast NOUN NN Number=Sing _ _ _ _ 15 cancer cancer NOUN NN Number=Sing _ _ _ _ 16 patients patient NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 comparison comparison NOUN NN Number=Sing _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 21 controls control NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4033 # text = A possible correlation between immune and clinical parameters was analysed in 50 breast cancer patients. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 possible possible ADJ JJ Degree=Pos _ _ _ _ 3 correlation correlation NOUN NN Number=Sing _ _ _ _ 4 between between ADP IN _ _ _ _ _ 5 immune immune ADJ JJ Degree=Pos _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 8 parameters parameter NOUN NNS Number=Plur _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 analysed analyse VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 50 50 NUM CD NumType=Card _ _ _ _ 13 breast breast NOUN NN Number=Sing _ _ _ _ 14 cancer cancer NOUN NN Number=Sing _ _ _ _ 15 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4034 # text = Immune parameters, natural killer cell and T lymphocyte functions and the numbers of circulating T lymphocytes were analysed against the clinical parameters comprising the tumour burden, the stage of the disease and the expression of hormone receptors on the tumour. 1 Immune Immune ADJ JJ Degree=Pos _ _ _ _ 2 parameters parameter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 natural natural ADJ JJ Degree=Pos _ _ _ _ 5 killer killer NOUN NN Number=Sing _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 T t NUM CD NumType=Card _ _ _ _ 9 lymphocyte lymphocyte ADJ JJ Degree=Pos _ _ _ _ 10 functions function NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 numbers number NOUN NNS Number=Plur _ _ _ _ 14 of of SCONJ IN _ _ _ _ _ 15 circulating circulate VERB VBG VerbForm=Ger _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 18 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 analysed analyse VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 against against ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 23 parameters parameter NOUN NNS Number=Plur _ _ _ _ 24 comprising comprise VERB VBG VerbForm=Ger _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 tumour tumour NOUN NN Number=Sing _ _ _ _ 27 burden burden NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 stage stage NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 disease disease NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 hormone hormone ADJ JJ Degree=Pos _ _ _ _ 39 receptors receptor NOUN NNS Number=Plur _ _ _ _ 40 on on ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 tumour tumour NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 4035 # text = In order to analyse the immune function data effectively, low responders were identified with stringent cut-off values. 1 In in ADP IN _ _ _ _ _ 2 order order NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 analyse analyse VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 immune immune ADJ JJ Degree=Pos _ _ _ _ 7 function function NOUN NN Number=Sing _ _ _ _ 8 data data NOUN NN Number=Sing _ _ _ _ 9 effectively effectively ADV RB _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 low low ADJ JJ Degree=Pos _ _ _ _ 12 responders responder NOUN NNS Number=Plur _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 stringent stringent NOUN NN Number=Sing _ _ _ _ 17 cut cut VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 off off ADP RP _ _ _ _ _ 20 values value NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4036 # text = Considerably higher proportions of low responders were found among the patient population. 1 Considerably considerably ADV RB _ _ _ _ _ 2 higher higher ADJ JJR Degree=Cmp _ _ _ _ 3 proportions proportion NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 low low ADJ JJ Degree=Pos _ _ _ _ 6 responders responder NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 among among ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 patient patient ADJ JJ Degree=Pos _ _ _ _ 12 population population NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 4037 # text = Elevated numbers of circulating T lymphocytes and CD3-directed cytolysis correlated with the expression of oestrogen receptors independently of the clinical/histological parameters. 1 Elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 numbers number NOUN NNS Number=Plur _ _ _ _ 3 of of SCONJ IN _ _ _ _ _ 4 circulating circulate VERB VBG VerbForm=Ger _ _ _ _ 5 T T PROPN NNP Number=Sing _ _ _ _ 6 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 cytolysis cytolysis NOUN NN Number=Sing _ _ _ _ 12 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 oestrogen oestrogen ADJ JJ Degree=Pos _ _ _ _ 18 receptors receptor NOUN NNS Number=Plur _ _ _ _ 19 independently independently ADV RB _ _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 clinical clinical ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 / / PUNCT , _ _ _ _ SpaceAfter=No 24 histological histological ADJ JJ Degree=Pos _ _ _ _ 25 parameters parameter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4038 # text = Document 003003647 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003647 003003647 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4039 # text = Charybdotoxin-sensitive, Ca(2+)-dependent membrane potential changes are not involved in human T or B cell activation and proliferation. 1 Charybdotoxin Charybdotoxin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 sensitive sensitive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 Ca ca PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 + + SYM SYM _ _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 - - PUNCT : _ _ _ _ SpaceAfter=No 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 membrane membrane NOUN NN Number=Sing _ _ _ _ 13 potential potential NOUN NN Number=Sing _ _ _ _ 14 changes change NOUN NNS Number=Plur _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 involved involved ADJ JJ Degree=Pos _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 or or CCONJ CC _ _ _ _ _ 22 B b PROPN NNP Number=Sing _ _ _ _ 23 cell cell PROPN NNP Number=Sing _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4040 # text = The involvement of ion channels in B and T lymphocyte activation is supported by many reports of changes in ion fluxes and membrane potential after mitogen binding. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 involvement involvement NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 ion ion NOUN NN Number=Sing _ _ _ _ 5 channels channel NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 B b PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 supported support VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 many many ADJ JJ Degree=Pos _ _ _ _ 16 reports report NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 changes change NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 ion ion NOUN NN Number=Sing _ _ _ _ 21 fluxes flux NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 membrane membrane NOUN NN Number=Sing _ _ _ _ 24 potential potential NOUN NN Number=Sing _ _ _ _ 25 after after ADP IN _ _ _ _ _ 26 mitogen mitogen NOUN NNS Number=Plur _ _ _ _ 27 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4041 # text = Human T and B lymphocytes demonstrate an early and transient hyperpolarization after ligand binding. 1 Human human PROPN NNP Number=Sing _ _ _ _ 2 T T PROPN NNP Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 B b ADJ JJ Degree=Pos _ _ _ _ 5 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 early early ADJ JJ Degree=Pos _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 transient transient ADJ JJ Degree=Pos _ _ _ _ 11 hyperpolarization hyperpolarization NOUN NN Number=Sing _ _ _ _ 12 after after ADP IN _ _ _ _ _ 13 ligand ligand NOUN NN Number=Sing _ _ _ _ 14 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 4042 # text = Inasmuch as the change in membrane potential is dependent on elevation of free cytosolic calcium, the hyperpolarization is presumably through opening of Ca(2+)-stimulated K+ channels. 1 Inasmuch Inasmuch ADV RB _ _ _ _ _ 2 as as ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 change change NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 membrane membrane NOUN NN Number=Sing _ _ _ _ 7 potential potential NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 elevation elevation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 free free ADJ JJ Degree=Pos _ _ _ _ 14 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 15 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 hyperpolarization hyperpolarization NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 presumably presumably ADV RB _ _ _ _ _ 21 through through ADP IN _ _ _ _ _ 22 opening opening NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 Ca ca PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 +) +) SYM NFP _ _ _ _ SpaceAfter=No 28 - - SYM SYM _ _ _ _ SpaceAfter=No 29 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 K k NUM CD NumType=Card _ _ _ SpaceAfter=No 31 + + SYM SYM _ _ _ _ _ 32 channels channel NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4043 # text = We have used charybdotoxin, a known inhibitor of Ca(2+)-dependent K+ channels, to study the role of these channels in lymphocyte activation and mitogenesis. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 charybdotoxin charybdotoxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 Ca ca PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 +) +) SYM NFP _ _ _ _ SpaceAfter=No 14 - - SYM SYM _ _ _ _ SpaceAfter=No 15 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 16 K k PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 + + SYM SYM _ _ _ _ _ 18 channels channel NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 study study VERB VB VerbForm=Inf _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 role role NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 26 channels channel NOUN NNS Number=Plur _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 mitogenesis mitogenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4044 # text = We demonstrate that charybdotoxin inhibits the ligand-induced transient membrane hyperpolarization in B and T cells in a dose-dependent fashion, without affecting changes in cytosolic Ca2+. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 charybdotoxin charybdotoxin NOUN NN Number=Sing _ _ _ _ 5 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 transient transient NOUN NN Number=Sing _ _ _ _ 11 membrane membrane NOUN NN Number=Sing _ _ _ _ 12 hyperpolarization hyperpolarization NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 B b PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 23 fashion fashion NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 without without SCONJ IN _ _ _ _ _ 26 affecting affecte VERB VBG VerbForm=Ger _ _ _ _ 27 changes change NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 30 Ca2 ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 +. +. NOUN NN Number=Sing _ _ _ _ # sent_id = 4045 # text = However, blockade of the Ca(2+)-activated K+ channel is not associated with changes in cell-cycle gene activation, IL-2 production, IL-2R expression or B and T cell mitogenesis. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 blockade blockade NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 Ca ca NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 +) +) SYM NFP _ _ _ _ SpaceAfter=No 10 - - SYM SYM _ _ _ _ SpaceAfter=No 11 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 K k NUM CD NumType=Card _ _ _ SpaceAfter=No 13 + + SYM SYM _ _ _ _ _ 14 channel channel NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 changes change NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 cycle cycle NOUN NN Number=Sing _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 2 2 NUM CD NumType=Card _ _ _ _ 30 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 2R 2R NOUN NN Number=Sing _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ _ 36 or or CCONJ CC _ _ _ _ _ 37 B b NOUN NN Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 T t NUM CD NumType=Card _ _ _ _ 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 mitogenesis mitogenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 4046 # text = These results imply that membrane potential changes secondary to the ligand-dependent opening of Ca(2+)-activated K+ channels are not involved in B and T lymphocyte activation and mitogenesis. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 imply imply ADV RB _ _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 membrane membrane ADJ JJ Degree=Pos _ _ _ _ 6 potential potential NOUN NN Number=Sing _ _ _ _ 7 changes change NOUN NNS Number=Plur _ _ _ _ 8 secondary secondary ADJ JJ Degree=Pos _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 14 opening opening NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 Ca ca PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 +) +) SYM NFP _ _ _ _ SpaceAfter=No 20 - - SYM SYM _ _ _ _ SpaceAfter=No 21 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 K k NUM CD NumType=Card _ _ _ SpaceAfter=No 23 + + SYM SYM _ _ _ _ _ 24 channels channel NOUN NNS Number=Plur _ _ _ _ 25 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 not not PART RB _ _ _ _ _ 27 involved involved ADJ JJ Degree=Pos _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 B b PROPN NNP Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 33 activation activation NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 mitogenesis mitogenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4047 # text = Document 003003650 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003650 003003650 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4048 # text = Epstein-Barr virus nuclear antigen 2 and latent membrane protein independently transactivate p53 through induction of NF-kappaB activity. 1 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 Barr Barr PROPN NNP Number=Sing _ _ _ _ 4 virus virus NOUN NN Number=Sing _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 antigen antigen NOUN NN Number=Sing _ _ _ _ 7 2 2 NUM CD NumType=Card _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 latent latent ADJ JJ Degree=Pos _ _ _ _ 10 membrane membrane NOUN NN Number=Sing _ _ _ _ 11 protein protein ADV WRB PronType=Rel _ _ _ _ 12 independently independently ADV RB _ _ _ _ _ 13 transactivate transactivate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 p53 p53 NUM CD NumType=Card _ _ _ _ 15 through through ADP IN _ _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4049 # text = B-cell immortalization by Epstein-Barr virus (EBV) is dependent on permanent control of the cellular processes which normally regulate cell division and apoptosis, functions possessed by p53 in a number of normal cell types. 1 B b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 immortalization immortalization NOUN NN Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 Barr Barr PROPN NNP Number=Sing _ _ _ _ 9 virus virus NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 permanent permanent ADJ JJ Degree=Pos _ _ _ _ 17 control control NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 21 processes processe NOUN NNS Number=Plur _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 normally normally ADV RB _ _ _ _ _ 24 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 division division NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 functions function NOUN NNS Number=Plur _ _ _ _ 31 possessed possess VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 p53 p53 NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 number number NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 normal normal ADJ JJ Degree=Pos _ _ _ _ 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 4050 # text = In studies initiated to evaluate relationships between EBV latent genes and p53, p53 levels were found to increase approximately 10-fold 4 to 5 days after EBV infection of purified resting human B cells; the induced p53 was transcriptionally active. 1 In in ADP IN _ _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 initiated initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 evaluate evaluate VERB VB VerbForm=Inf _ _ _ _ 6 relationships relationship NOUN NNS Number=Plur _ _ _ _ 7 between between ADP IN _ _ _ _ _ 8 EBV EBV PROPN NNP Number=Sing _ _ _ _ 9 latent latent ADJ JJ Degree=Pos _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 p53 p53 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 p53 p53 NUM CD NumType=Card _ _ _ _ 15 levels level NOUN NNS Number=Plur _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 increase increase VERB VB VerbForm=Inf _ _ _ _ 20 approximately approximately ADV RB _ _ _ _ _ 21 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 fold fold VERB VB VerbForm=Inf _ _ _ _ 24 4 4 NUM CD NumType=Card _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 5 5 NUM CD NumType=Card _ _ _ _ 27 days day NOUN NNS Number=Plur _ _ _ _ 28 after after ADP IN _ _ _ _ _ 29 EBV EBV PROPN NNP Number=Sing _ _ _ _ 30 infection infection NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 resting reste VERB VBG VerbForm=Ger _ _ _ _ 34 human human ADJ JJ Degree=Pos _ _ _ _ 35 B b NOUN NN Number=Sing _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 ; ; PUNCT , _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 p53 p53 NOUN NN Number=Sing _ _ _ _ 41 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 42 transcriptionally transcriptionally ADV RB _ _ _ _ _ 43 active active ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 4051 # text = Latent membrane protein 1 and, to a lesser extent, EBV nuclear antigen 2 mediated the increase in p53 levels via activation of the NF-kappaB transcription factor. 1 Latent Latent ADJ JJ Degree=Pos _ _ _ _ 2 membrane membrane NOUN NN Number=Sing _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 1 1 NUM CD NumType=Card _ _ _ _ 5 and and CCONJ CC _ _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 lesser lesser ADJ JJR Degree=Cmp _ _ _ _ 10 extent extent NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 EBV EBV PROPN NNP Number=Sing _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 antigen antigen NUM CD NumType=Card _ _ _ _ 15 2 2 NUM CD NumType=Card _ _ _ _ 16 mediated mediate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 increase increase NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 p53 p53 NUM CD NumType=Card _ _ _ _ 21 levels level NOUN NNS Number=Plur _ _ _ _ 22 via via ADP IN _ _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4052 # text = Document 003003651 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003651 003003651 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4053 # text = Grf40, A novel Grb2 family member, is involved in T cell signaling through interaction with SLP-76 and LAT. 1 Grf40 Grf40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 novel novel NOUN NN Number=Sing _ _ _ _ 5 Grb2 Grb2 NUM CD NumType=Card _ _ _ _ 6 family family NOUN NN Number=Sing _ _ _ _ 7 member member NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 involved involved ADJ JJ Degree=Pos _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cell cell PROPN NNP Number=Sing _ _ _ _ 14 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 15 through through ADP IN _ _ _ _ _ 16 interaction interaction NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 SLP SLP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 76 76 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 LAT LAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4054 # text = We molecularly cloned a new Grb2 family member, named Grf40, containing the common SH3-SH2-SH3 motif. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 molecularly molecularly ADV RB _ _ _ _ _ 3 cloned clon VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 new new ADJ JJ Degree=Pos _ _ _ _ 6 Grb2 grb2 NOUN NN Number=Sing _ _ _ _ 7 family family NOUN NN Number=Sing _ _ _ _ 8 member member NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 named nam VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 Grf40 Grf40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 containing contain VERB VBG VerbForm=Ger _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 common common ADJ JJ Degree=Pos _ _ _ _ 16 SH3-SH2 Sh3-sh2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 SH3 SH3 NOUN NN Number=Sing _ _ _ _ 19 motif. motif. NOUN NN Number=Sing _ _ _ _ # sent_id = 4055 # text = Expression of Grf40 is predominant in hematopoietic cells, particularly T cells. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Grf40 Grf40 PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 predominant predominant ADJ JJ Degree=Pos _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 particularly particularly ADV RB _ _ _ _ _ 11 T t NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 4056 # text = Grf40 binds to the SH2 domain-containing leukocyte protein of 76 kD (SLP-76) via its SH3 domain more tightly than Grb2. 1 Grf40 Grf40 NUM CD NumType=Card _ _ _ _ 2 binds bind NOUN NNS Number=Plur _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 SH2 Sh2 NOUN NN Number=Sing _ _ _ _ 6 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 containing contain VERB VBG VerbForm=Ger _ _ _ _ 9 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 76 76 NUM CD NumType=Card _ _ _ _ 13 kD kD NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 SLP SLP NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 76 76 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 via via ADP IN _ _ _ _ _ 20 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 SH3 SH3 NOUN NN Number=Sing _ _ _ _ 22 domain domain ADV RB _ _ _ _ _ 23 more more ADV RBR _ _ _ _ _ 24 tightly tightly ADV RB _ _ _ _ _ 25 than than ADP IN _ _ _ _ _ 26 Grb2 Grb2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4057 # text = Incidentally, Grf40 binds to linker for activation of T cells (LAT) possibly via its SH2 domain. 1 Incidentally Incidentally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Grf40 Grf40 PROPN NNP Number=Sing _ _ _ _ 4 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 linker linker VERB VB VerbForm=Inf _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 LAT LAT NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 possibly possibly ADV RB _ _ _ _ _ 16 via via ADP IN _ _ _ _ _ 17 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 SH2 Sh2 NOUN NN Number=Sing _ _ _ _ 19 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4058 # text = Overexpression of wild-type Grf40 in Jurkat cells induced a significant increase of SLP-76-dependent interleukin (IL)-2 promoter and nuclear factor of activated T cell (NF-AT) activation upon T cell receptor (TCR) stimulation, whereas the COOH-terminal SH3-deleted Grf40 mutant lacked any recognizable increase in IL-2 promoter activity. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 type type NOUN NN Number=Sing _ _ _ _ 6 Grf40 Grf40 NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 significant significant ADJ JJ Degree=Pos _ _ _ _ 13 increase increase NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 SLP-76 SLP-76 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 -dependent -dependent ADJ JJ Degree=Pos _ _ _ _ 17 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 T t PROPN NNP Number=Sing _ _ _ _ 30 cell cell PROPN NNP Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 AT at PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 activation activation NOUN NN Number=Sing _ _ _ _ 37 upon upon ADP IN _ _ _ _ _ 38 T t PROPN NNP Number=Sing _ _ _ _ 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 receptor receptor NOUN NN Number=Sing _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 TCR TCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ _ 44 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 whereas whereas SCONJ IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 COOH COOh NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 terminal terminal NOUN NN Number=Sing _ _ _ _ 51 SH3 SH3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 deleted delet VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 54 Grf40 Grf40 PROPN NNP Number=Sing _ _ _ _ 55 mutant mutant ADV RB _ _ _ _ _ 56 lacked lack VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 57 any any DET DT _ _ _ _ _ 58 recognizable recognizable ADJ JJ Degree=Pos _ _ _ _ 59 increase increase NOUN NN Number=Sing _ _ _ _ 60 in in ADP IN _ _ _ _ _ 61 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 62 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 63 2 2 NUM CD NumType=Card _ _ _ _ 64 promoter promoter NOUN NN Number=Sing _ _ _ _ 65 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 66 . . PUNCT . _ _ _ _ _ # sent_id = 4059 # text = Furthermore, the SH2-deleted Grf40 mutant led to a marked inhibition of these regulatory activities, the effect of which is apparently stronger than that of the SH2-deleted Grb2 mutant. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 SH2 Sh2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 deleted delet VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 Grf40 Grf40 PROPN NNP Number=Sing _ _ _ _ 8 mutant mutant NOUN NN Number=Sing _ _ _ _ 9 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 16 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 17 activities activity NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 effect effect NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 apparently apparently ADV RB _ _ _ _ _ 25 stronger stronger ADJ JJR Degree=Cmp _ _ _ _ 26 than than ADP IN _ _ _ _ _ 27 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 SH2 Sh2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 deleted delet VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 Grb2 grb2 NOUN NN Number=Sing _ _ _ _ 34 mutant mutant NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4060 # text = Our data suggest that Grf40 is an adaptor molecule involved in TCR-mediated signaling through a more efficient interaction than Grb2 with SLP-76 and LAT. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Grf40 Grf40 PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 adaptor adaptor NOUN NN Number=Sing _ _ _ _ 9 molecule molecule NOUN NN Number=Sing _ _ _ _ 10 involved involved ADJ JJ Degree=Pos _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 mediated mediated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 signaling signaling VERB VBG VerbForm=Ger _ _ _ _ 16 through through ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 more more ADV RBR _ _ _ _ _ 19 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 20 interaction interaction NOUN NN Number=Sing _ _ _ _ 21 than than ADP IN _ _ _ _ _ 22 Grb2 grb2 NOUN NN Number=Sing _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 SLP SLP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 76 76 NUM CD NumType=Card _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 LAT Lat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4061 # text = Document 003003655 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003655 003003655 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4062 # text = Regulation of the human interleukin-2 gene by the alpha and beta isoforms of the glucocorticoid receptor. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 beta beta NOUN NN Number=Sing _ _ _ _ 14 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 18 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4063 # text = The immunosuppressive effects of glucocorticoids are largely due to transcriptional inhibition of immunologically relevant genes, such as the interleukin-2 (IL-2) gene. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 3 effects effect NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 largely largely ADV RB _ _ _ _ _ 8 due due ADP IN _ _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 immunologically immunologically ADV RB _ _ _ _ _ 14 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 such such ADJ JJ Degree=Pos _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4064 # text = These effects are mediated by the intracellular glucocorticoid receptor (GR). 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 8 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 GR GR NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 4065 # text = In humans, alternative splicing of the GR precursor mRNA gives rise to two receptor isoforms, termed GRalpha and GRbeta. 1 In in ADP IN _ _ _ _ _ 2 humans human NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 5 splicing splicing NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 GR GR PROPN NNP Number=Sing _ _ _ _ 9 precursor precursor PROPN NNP Number=Sing _ _ _ _ 10 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 11 gives give VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 rise rise NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 two two NUM CD NumType=Card _ _ _ _ 15 receptor receptor NOUN NN Number=Sing _ _ _ _ 16 isoforms isoform NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 GRalpha GRalpha PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 GRbeta GRbeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4066 # text = We previously demonstrated that GRbeta could antagonize GRalpha-mediated transactivation of a glucocorticoid-responsive element (GRE)-driven reporter gene in COS-7 cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 previously previously ADV RB _ _ _ _ _ 3 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 GRbeta GRbeta PROPN NNP Number=Sing _ _ _ _ 6 could could AUX MD VerbForm=Fin _ _ _ _ 7 antagonize antagonize VERB VB VerbForm=Inf _ _ _ _ 8 GRalpha GRalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 17 element element NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 GRE GRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 reporter reporter NOUN NN Number=Sing _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 COS COS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 7 7 NUM CD NumType=Card _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4067 # text = The present study was designed to analyze the roles of the two GR isoforms on glucocorticoid-mediated transrepression of the IL-2 gene. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 designed design VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 analyze analyze VERB VB VerbForm=Inf _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 roles role NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 two two NUM CD NumType=Card _ _ _ _ 13 GR Gr ADJ JJ Degree=Pos _ _ _ _ 14 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 glucocorticoid glucocorticoid VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 transrepression transrepression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4068 # text = Using a recently developed transfection technique, we demonstrate that in primary human lymphocytes, stimulation of a 548 bp IL-2 promoter-luciferase reporter construct by phorbol ester and calcium ionophore is reversed by dexamethasone to a similar extent as in Jurkat T lymphoma cells transfected with a GRalpha expression vector. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 recently recently ADV RB _ _ _ _ _ 4 developed develop VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 transfection transfection NOUN NN Number=Sing _ _ _ _ 6 technique technique NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 9 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 primary primary ADJ JJ Degree=Pos _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 548 548 NUM CD NumType=Card _ _ _ _ 20 bp bp NOUN NN Number=Sing _ _ _ _ 21 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ _ 24 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 27 reporter reporter NOUN NN Number=Sing _ _ _ _ 28 construct construct NOUN NN Number=Sing _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 31 ester ester NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 calcium calcium NOUN NN Number=Sing _ _ _ _ 34 ionophore ionophore NOUN NN Number=Sing _ _ _ _ 35 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 reversed reverse VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 by by ADP IN _ _ _ _ _ 38 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 39 to to ADP IN _ _ _ _ _ 40 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 41 similar similar ADJ JJ Degree=Pos _ _ _ _ 42 extent extent NOUN NN Number=Sing _ _ _ _ 43 as as ADP IN _ _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 46 T t PROPN NNP Number=Sing _ _ _ _ 47 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 48 cells cell NOUN NNS Number=Plur _ _ _ _ 49 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 with with ADP IN _ _ _ _ _ 51 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 52 GRalpha GRalpha PROPN NNP Number=Sing _ _ _ _ 53 expression expression NOUN NN Number=Sing _ _ _ _ 54 vector vector NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 4069 # text = Transfection of a GRbeta expression vector alone did not result in IL-2 promoter repression in response to glucocorticoids. 1 Transfection Transfection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 GRbeta GRbeta PROPN NNP Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 vector vector NOUN NN Number=Sing _ _ _ _ 7 alone alone ADV RB _ _ _ _ _ 8 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 result result VERB VB VerbForm=Inf _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 repression repression NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 response response NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4070 # text = Furthermore, GRbeta did not antagonize the repressive effects of GRalpha on IL-2 promoter activity. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 GRbeta GRbeta PROPN NNP Number=Sing _ _ _ _ 4 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 antagonize antagonize VERB VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 repressive repressive ADJ JJ Degree=Pos _ _ _ _ 9 effects effect NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 GRalpha GRalpha PROPN NNP Number=Sing _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4071 # text = Surprisingly, overexpression of GRbeta in Jurkat cells did not cause significant inhibition of GRalpha-induced transactivation of a GRE-dependent luciferase reporter gene either. 1 Surprisingly surprisingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 GRbeta GRbeta PROPN NNP Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 cause cause VERB VB VerbForm=Inf _ _ _ _ 12 significant significant ADJ JJ Degree=Pos _ _ _ _ 13 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 GRalpha GRalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 GRE GRE NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 24 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 25 reporter reporter NOUN NN Number=Sing _ _ _ _ 26 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 either either ADV RB _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4072 # text = We conclude that the transrepressive effect of glucocorticoids on IL-2 gene transcription is exclusively mediated by GRalpha. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 transrepressive transrepressive ADJ JJ Degree=Pos _ _ _ _ 6 effect effect NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 exclusively exclusively ADV RB _ _ _ _ _ 17 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 GRalpha GRalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4073 # text = GRbeta can neither antagonize GRalpha-mediated transactivation nor transrepression in Jurkat cells, indicating a cell type-specific pattern of GRbeta-mediated antiglucocorticoid activity. 1 GRbeta GRbeta PROPN NNP Number=Sing _ _ _ _ 2 can can AUX MD VerbForm=Fin _ _ _ _ 3 neither neither ADV RB _ _ _ _ _ 4 antagonize antagonize VERB VB VerbForm=Inf _ _ _ _ 5 GRalpha GRalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 9 nor nor CCONJ CC _ _ _ _ _ 10 transrepression transrepression NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 specific specific ADJ JJ Degree=Pos _ _ _ _ 21 pattern pattern NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 GRbeta GRbeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 antiglucocorticoid antiglucocorticoid ADJ JJ Degree=Pos _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4074 # text = Document 003003662 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003662 003003662 NUM CD NumType=Card _ _ _ _ 3 ends. ends. NOUN NN Number=Sing _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4075 # text = HLA-DR-, CD33+, CD56+, CD16- myeloid/natural killer cell acute leukemia: a previously unrecognized form of acute leukemia potentially misdiagnosed as French-American-British acute myeloid leukemia-M3 [see comments] 1 HLA-DR Hla-dr ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 CD33+ Cd33+ NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 CD56+ Cd56+ NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 CD16 CD16 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ _ 10 myeloid myeloid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 natural natural ADJ JJ Degree=Pos _ _ _ _ 13 killer killer NOUN NN Number=Sing _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 acute acute NOUN NN Number=Sing _ _ _ _ 16 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 : : PUNCT : _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 previously previously ADV RB _ _ _ _ _ 20 unrecognized unrecognized ADJ JJ Degree=Pos _ _ _ _ 21 form form NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 acute acute ADJ JJ Degree=Pos _ _ _ _ 24 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 25 potentially potentially ADV RB _ _ _ _ _ 26 misdiagnosed misdiagnose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 as as ADP IN _ _ _ _ _ 28 French french ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 American- American- SYM NFP _ _ _ _ SpaceAfter=No 31 British british ADJ JJ Degree=Pos _ _ _ _ 32 acute acute ADJ JJ Degree=Pos _ _ _ _ 33 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 34 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 M3 M3 NOUN NN Number=Sing _ _ _ _ 37 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 see see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 comments comment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 4076 # text = We have identified and characterized a previously unrecognized form of acute leukemia that shares features of both myeloid and natural killer (NK) cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 characterized characterize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 previously previously ADV RB _ _ _ _ _ 8 unrecognized unrecognized ADJ JJ Degree=Pos _ _ _ _ 9 form form NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 acute acute ADJ JJ Degree=Pos _ _ _ _ 12 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 shares share VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 features feature NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 both both CCONJ CC _ _ _ _ _ 18 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 natural natural ADJ JJ Degree=Pos _ _ _ _ 21 killer killer NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 NK NK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4077 # text = From a consecutive series of 350 cases of adult de novo acute myeloid leukemia (AML), we identified 20 cases (6%) with a unique immunophenotype: CD33+, CD56+, CD11a+, CD13lo, CD15lo, CD34+/-, HLA-DR-, CD16-. 1 From from ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 consecutive consecutive ADJ JJ Degree=Pos _ _ _ _ 4 series series NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 350 350 NUM CD NumType=Card _ _ _ _ 7 cases case NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 adult adult NOUN NN Number=Sing _ _ _ _ 10 de de X FW Foreign=Yes _ _ _ _ 11 novo novo ADV RB _ _ _ _ _ 12 acute acute VERB VB VerbForm=Inf _ _ _ _ 13 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 14 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 AML AML INTJ UH _ _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 20 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 20 20 NUM CD NumType=Card _ _ _ _ 22 cases case NOUN NNS Number=Plur _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 unique unique ADJ JJ Degree=Pos _ _ _ _ 30 immunophenotype immunophenotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 : : PUNCT : _ _ _ _ _ 32 CD33+ Cd33+ NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 CD56+ Cd56+ NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 CD11a CD11a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 + + SYM SYM _ _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 CD13 CD13 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 lo lo NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 CD15 CD15 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 lo lo NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 CD34+/-, Cd34+/-, NOUN NN Number=Sing _ _ _ _ 46 HLA- HLA- PUNCT : _ _ _ _ SpaceAfter=No 47 DR dr NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 16-. 16-. NOUN NN Number=Sing _ _ _ _ # sent_id = 4078 # text = Multicolor flow cytometric assays confirmed the coexpression of myeloid (CD33, CD13, CD15) and NK cell-associated (CD56) antigens in each case, whereas reverse transcription polymerase chain reaction (RT-PCR) assays confirmed the identity of CD56 (neural cell adhesion molecule) in leukemic blasts. 1 Multicolor Multicolor PROPN NNP Number=Sing _ _ _ _ 2 flow flow VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 cytometric cytometric ADJ JJ Degree=Pos _ _ _ _ 4 assays assay NOUN NNS Number=Plur _ _ _ _ 5 confirmed confirm VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 coexpression coexpression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 CD33 CD33 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 CD13 CD13 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 CD15 CD15 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 NK NK PROPN NNP Number=Sing _ _ _ _ 19 cell cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 CD56 Cd56 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 antigens antigen NOUN NNS Number=Plur _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 each each DET DT _ _ _ _ _ 28 case case NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 whereas whereas SCONJ IN _ _ _ _ _ 31 reverse reverse NOUN NN Number=Sing _ _ _ _ 32 transcription transcription NOUN NN Number=Sing _ _ _ _ 33 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 34 chain chain NOUN NN Number=Sing _ _ _ _ 35 reaction reaction NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 RT-PCR Rt-pcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 assays assay NOUN NNS Number=Plur _ _ _ _ 40 confirmed confirm VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 identity identity NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 CD56 Cd56 PROPN NNP Number=Sing _ _ _ _ 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 neural neural ADJ JJ Degree=Pos _ _ _ _ 47 cell cell NOUN NN Number=Sing _ _ _ _ 48 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 49 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ _ 51 in in ADP IN _ _ _ _ _ 52 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 53 blasts blast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 4079 # text = Although two cases expressed CD4, no case expressed CD2, CD3, or CD8 and no case showed clonal rearrangement of genes encoding the T-cell receptor (TCR beta, gamma, delta). 1 Although although SCONJ IN _ _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 cases case NOUN NNS Number=Plur _ _ _ _ 4 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 CD4 Cd4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 no no DET DT _ _ _ _ _ 8 case case NOUN NN Number=Sing _ _ _ _ 9 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 CD2 Cd2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 CD8 CD8 PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 no no DET DT _ _ _ _ _ 18 case case NOUN NN Number=Sing _ _ _ _ 19 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 clonal clonal ADJ JJ Degree=Pos _ _ _ _ 21 rearrangement rearrangement NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 genes gene NOUN NNS Number=Plur _ _ _ _ 24 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 receptor receptor NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 TCR Tcr NOUN NN Number=Sing _ _ _ _ 31 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 delta delta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 4080 # text = Leukemic blasts in the majority of cases shared unique morphologic features (deeply invaginated nuclear membranes, scant cytoplasm with fine azurophilic granularity, and finely granular Sudan black B and myeloperoxidase cytochemical reactivity) that were remarkably similar to those of acute promyelocytic leukemia (APL); particularly the microgranular variant (FAB AML-M3v). 1 Leukemic Leukemic ADJ JJ Degree=Pos _ _ _ _ 2 blasts blast NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 majority majority NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 cases case NOUN NNS Number=Plur _ _ _ _ 8 shared share VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 unique unique ADJ JJ Degree=Pos _ _ _ _ 10 morphologic morphologic NOUN NN Number=Sing _ _ _ _ 11 features feature NOUN NNS Number=Plur _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 deeply deeply ADV RB _ _ _ _ _ 14 invaginated invaginate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 membranes membrane NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 scant scant ADJ JJ Degree=Pos _ _ _ _ 19 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 fine fine ADJ JJ Degree=Pos _ _ _ _ 22 azurophilic azurophilic ADJ JJ Degree=Pos _ _ _ _ 23 granularity granularity NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 finely finely ADV RB _ _ _ _ _ 27 granular granular ADJ JJ Degree=Pos _ _ _ _ 28 Sudan Sudan PROPN NNP Number=Sing _ _ _ _ 29 black black ADJ JJ Degree=Pos _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 myeloperoxidase myeloperoxidase ADJ JJ Degree=Pos _ _ _ _ 33 cytochemical cytochemical ADJ JJ Degree=Pos _ _ _ _ 34 reactivity reactivity NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 that that PRON WDT PronType=Rel _ _ _ _ 37 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 38 remarkably remarkably ADV RB _ _ _ _ _ 39 similar similar ADJ JJ Degree=Pos _ _ _ _ 40 to to ADP IN _ _ _ _ _ 41 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 acute acute ADJ JJ Degree=Pos _ _ _ _ 44 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ _ 45 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 APL Apl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 49 ; ; PUNCT , _ _ _ _ _ 50 particularly particularly ADV RB _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 microgranular microgranular ADJ JJ Degree=Pos _ _ _ _ 53 variant variant NOUN NN Number=Sing _ _ _ _ 54 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 55 FAB FAB PROPN NNP Number=Sing _ _ _ _ 56 AML aml PROPN NNP Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 M3 M3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 v v NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ _ # sent_id = 4081 # text = However, all 20 cases lacked the t(15;17) and 17 cases tested lacked the promyelocytic/retinoic acid receptor alpha (RAR alpha) fusion transcript in RT-PCR assays; 12 cases had 46,XX or 46,XY karyotypes, whereas 2 cases had abnormalities of chromosome 17q: 1 with del(17)(q25) and the other with t(11;17)(q23;q21) and the promyelocytic leukemia zinc finger/RAR alpha fusion transcript. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 all all DET DT _ _ _ _ _ 4 20 20 NUM CD NumType=Card _ _ _ _ 5 cases case NOUN NNS Number=Plur _ _ _ _ 6 lacked lack VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 t t NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 15;17 15;17 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 17 17 NUM CD NumType=Card _ _ _ _ 14 cases case NOUN NNS Number=Plur _ _ _ _ 15 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 lacked lack VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 / / PUNCT , _ _ _ _ SpaceAfter=No 20 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 21 acid acid ADJ JJ Degree=Pos _ _ _ _ 22 receptor receptor NOUN NN Number=Sing _ _ _ _ 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 RAR Rar NOUN NN Number=Sing _ _ _ _ 26 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 fusion fusion NOUN NN Number=Sing _ _ _ _ 29 transcript transcriep NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 RT Rt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 PCR PCR PROPN NNP Number=Sing _ _ _ _ 34 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 ; ; PUNCT , _ _ _ _ _ 36 12 12 NUM CD NumType=Card _ _ _ _ 37 cases case NOUN NNS Number=Plur _ _ _ _ 38 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 39 46 46 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ SpaceAfter=No 41 XX XX PROPN NNP Number=Sing _ _ _ _ 42 or or CCONJ CC _ _ _ _ _ 43 46 46 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ SpaceAfter=No 45 XY Xy NOUN NN Number=Sing _ _ _ _ 46 karyotypes karyotype NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 whereas wherea SCONJ IN _ _ _ _ _ 49 2 2 NUM CD NumType=Card _ _ _ _ 50 cases case NOUN NNS Number=Plur _ _ _ _ 51 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 52 abnormalities abnormality NOUN NNS Number=Plur _ _ _ _ 53 of of ADP IN _ _ _ _ _ 54 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 55 17q 17q NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 : : PUNCT : _ _ _ _ _ 57 1 1 NUM CD NumType=Card _ _ _ _ 58 with with ADP IN _ _ _ _ _ 59 del del NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 61 17 17 NUM CD NumType=Card _ _ _ SpaceAfter=No 62 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 63 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 64 q25 q25 X LS _ _ _ _ SpaceAfter=No 65 ) ) PUNCT -RRB- _ _ _ _ _ 66 and and CCONJ CC _ _ _ _ _ 67 the the DET DT Definite=Def|PronType=Art _ _ _ _ 68 other other ADJ JJ Degree=Pos _ _ _ _ 69 with with ADP IN _ _ _ _ _ 70 t t NOUN NN Number=Sing _ _ _ SpaceAfter=No 71 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 72 11;17 11;17 NUM CD NumType=Card _ _ _ SpaceAfter=No 73 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 74 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 75 q23;q21 q23;q21 X LS _ _ _ _ SpaceAfter=No 76 ) ) PUNCT -RRB- _ _ _ _ _ 77 and and CCONJ CC _ _ _ _ _ 78 the the DET DT Definite=Def|PronType=Art _ _ _ _ 79 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ _ 80 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 81 zinc zinc NOUN NN Number=Sing _ _ _ _ 82 finger finger NOUN NN Number=Sing _ _ _ SpaceAfter=No 83 / / PUNCT , _ _ _ _ SpaceAfter=No 84 RAR Rar NOUN NN Number=Sing _ _ _ _ 85 alpha alpha NOUN NN Number=Sing _ _ _ _ 86 fusion fusion NOUN NN Number=Sing _ _ _ _ 87 transcript transcript NOUN NN Number=Sing _ _ _ SpaceAfter=No 88 . . PUNCT . _ _ _ _ _ # sent_id = 4082 # text = All cases tested (6/20), including the case with t(11;17), failed to differentiate in vitro in response to all-trans retinoic acid (ATRA), suggesting that these cases may account for some APLs that have not shown a clinical response to ATRA. 1 All all DET DT _ _ _ _ _ 2 cases case NOUN NNS Number=Plur _ _ _ _ 3 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 6/20 6/20 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 including include VERB VBG VerbForm=Ger _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 case case NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 t t NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 11;17 11;17 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 differentiate differentiate VERB VB VerbForm=Inf _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 vitro vitro NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 all all DET DT _ _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 trans tran NOUN NNS Number=Plur _ _ _ _ 28 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 29 acid acid NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 ATRA Atra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 35 that that SCONJ IN _ _ _ _ _ 36 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 37 cases case NOUN NNS Number=Plur _ _ _ _ 38 may may AUX MD VerbForm=Fin _ _ _ _ 39 account account VERB VB VerbForm=Inf _ _ _ _ 40 for for ADP IN _ _ _ _ _ 41 some some DET DT _ _ _ _ _ 42 APLs APL NOUN NNS Number=Plur _ _ _ _ 43 that that PRON WDT PronType=Rel _ _ _ _ 44 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 45 not not PART RB _ _ _ _ _ 46 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 48 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 49 response response NOUN NN Number=Sing _ _ _ _ 50 to to ADP IN _ _ _ _ _ 51 ATRA ATRA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 4083 # text = Four of 6 cases tested showed functional NK cell-mediated cytotoxicity, suggesting a relationship between these unique CD33+, CD56+, CD16- acute leukemias and normal CD56+, CD16- NK precursor cells. 1 Four four NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 6 6 NUM CD NumType=Card _ _ _ _ 4 cases case NOUN NNS Number=Plur _ _ _ _ 5 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 showed show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 functional functional ADJ JJ Degree=Pos _ _ _ _ 8 NK NK PROPN NNP Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 cytotoxicity cytotoxicity NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 relationship relationship NOUN NN Number=Sing _ _ _ _ 17 between between ADP IN _ _ _ _ _ 18 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 19 unique unique ADJ JJ Degree=Pos _ _ _ _ 20 CD33+ Cd33+ NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 CD56+ Cd56+ NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 CD16 CD16 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ _ 26 acute acute NOUN NN Number=Sing _ _ _ _ 27 leukemias leukemia NOUN NNS Number=Plur _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 normal normal ADJ JJ Degree=Pos _ _ _ _ 30 CD56+ Cd56+ NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 16 16 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 - - PUNCT , _ _ _ _ _ 35 NK NK PROPN NNP Number=Sing _ _ _ _ 36 precursor precursor ADJ JJ Degree=Pos _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 4084 # text = Using a combination of panning and multiparameter flow cytometric sorting, we identified a normal CD56+, CD33+, CD16- counterpart cell at a frequency of 1% to 2% in the peripheral blood of healthy individuals. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 combination combination NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 panning panning NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 multiparameter multiparameter NOUN NN Number=Sing _ _ _ _ 8 flow flow NOUN NN Number=Sing _ _ _ _ 9 cytometric cytometric NOUN NN Number=Sing _ _ _ _ 10 sorting sorting VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 13 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 normal normal ADJ JJ Degree=Pos _ _ _ _ 16 CD56+ Cd56+ NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 CD33+ Cd33+ NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 CD16 CD16 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ _ 22 counterpart counterpart NOUN NN Number=Sing _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 at at ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 frequency frequency NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 % % SYM NN Number=Sing _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 % % SYM NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 36 blood blood NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 39 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 4085 # text = Our studies suggest that this form of acute leukemia may arise from transformation of a precursor cell common to both the myeloid and NK cell lineages; thus we propose the designation myeloid/NK acute leukemia. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 form form NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 acute acute ADJ JJ Degree=Pos _ _ _ _ 9 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 10 may may AUX MD VerbForm=Fin _ _ _ _ 11 arise arise VERB VB VerbForm=Inf _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 transformation transformation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 precursor precursor ADJ JJ Degree=Pos _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 common common ADJ JJ Degree=Pos _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 both both CCONJ CC _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 NK Nk PROPN NNP Number=Sing _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 ; ; PUNCT , _ _ _ _ _ 28 thus thus ADV RB _ _ _ _ _ 29 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 30 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 designation designation NOUN NN Number=Sing _ _ _ _ 33 myeloid myeloid NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 / / PUNCT , _ _ _ _ SpaceAfter=No 35 NK NK PROPN NNP Number=Sing _ _ _ _ 36 acute acute ADJ JJ Degree=Pos _ _ _ _ 37 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 4086 # text = Recognition of this new leukemic entity will be important in distinguishing these ATRA-nonresponsive cases from ATRA-responsive true APL. 1 Recognition recognition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 new new ADJ JJ Degree=Pos _ _ _ _ 5 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 6 entity entity NOUN NN Number=Sing _ _ _ _ 7 will will AUX MD VerbForm=Fin _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 important important ADJ JJ Degree=Pos _ _ _ _ 10 in in SCONJ IN _ _ _ _ _ 11 distinguishing distinguish VERB VBG VerbForm=Ger _ _ _ _ 12 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 13 ATRA Atra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 nonresponsive nonresponsive ADJ JJ Degree=Pos _ _ _ _ 16 cases cas NOUN NNS Number=Plur _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 ATRA ATRA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 21 true true ADJ JJ Degree=Pos _ _ _ _ 22 APL Apl NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4087 # text = Document 003003667 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003667 003003667 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4088 # text = Single point estimation of glucocorticoid receptors in lymphocytes of normal subjects and of children under long term glucocorticoid treatment. 1 Single single ADJ JJ Degree=Pos _ _ _ _ 2 point point NOUN NN Number=Sing _ _ _ _ 3 estimation estimation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 6 receptors receptor NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 normal normal ADJ JJ Degree=Pos _ _ _ _ 11 subjects subjects NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 children child NOUN NNS Number=Plur _ _ _ _ 15 under under ADP IN _ _ _ _ _ 16 long long ADJ JJ Degree=Pos _ _ _ _ 17 term term NOUN NN Number=Sing _ _ _ _ 18 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ _ 19 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4089 # text = A single point assay of glucocorticoid receptors (GR) in human lymphocytes based on the measurement of specific dexamethasone binding has been developed and compared with a common multi-point Scatchard analysis. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 single single ADJ JJ Degree=Pos _ _ _ _ 3 point point NOUN NN Number=Sing _ _ _ _ 4 assay assay NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 7 receptors receptor NOUN NNS Number=Plur _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 GR GR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 14 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 measurement measurement NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 21 binding binding NOUN NN Number=Sing _ _ _ _ 22 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 24 developed develop VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 common common ADJ JJ Degree=Pos _ _ _ _ 30 multi-point multi-point ADJ JJ Degree=Pos _ _ _ _ 31 Scatchard Scatchard PROPN NNP Number=Sing _ _ _ _ 32 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4090 # text = The assay conditions-concentration of the ligand 20 nmol/l, incubation time 2 h and the cell count 2-6 mil. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 assay assay NOUN NN Number=Sing _ _ _ _ 3 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 - - PUNCT : _ _ _ _ SpaceAfter=No 5 concentration concentration NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 ligand ligand NOUN NN Number=Sing _ _ _ _ 9 20 20 NUM CD NumType=Card _ _ _ _ 10 nmol nmol NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 l l NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 incubation incubation NOUN NN Number=Sing _ _ _ _ 15 time time NOUN NN Number=Sing _ _ _ _ 16 2 2 NUM CD NumType=Card _ _ _ _ 17 h h NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 count count NOUN NN Number=Sing _ _ _ _ 22 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - SYM SYM _ _ _ _ SpaceAfter=No 24 6 6 NUM CD NumType=Card _ _ _ _ 25 mil. mil. NOUN NNS Number=Plur _ _ _ _ # sent_id = 4091 # text = cells/tube in the assay volume 0.25 ml were found to be optimal. 1 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 / / PUNCT , _ _ _ _ SpaceAfter=No 3 tube tube NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 assay assay NOUN NN Number=Sing _ _ _ _ 7 volume volume NOUN NN Number=Sing _ _ _ _ 8 0.25 0.25 NUM CD NumType=Card _ _ _ _ 9 ml ml NOUN NN Number=Sing _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 optimal optimal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 4092 # text = An attempt was also undertaken to use a cell harvester for the separation of cells from unbound ligand. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 attempt attempt NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 undertaken undertaken ADJ JJ Degree=Pos _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 use use VERB VB VerbForm=Inf _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 harvester harvester NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 separation separation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 from from ADP IN _ _ _ _ _ 17 unbound unbound ADJ JJ Degree=Pos _ _ _ _ 18 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 4093 # text = Though specifically bound dexamethasone measured by whole-cell assay and that using cell harvester correlated well, almost by one order lower values obtained with the latter method render it non-applicable for receptor quantitation. 1 Though though SCONJ IN _ _ _ _ _ 2 specifically specifically ADV RB _ _ _ _ _ 3 bound bound ADJ JJ Degree=Pos _ _ _ _ 4 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 5 measured measure VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 whole whole ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 assay assay NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 using use VERB VBG VerbForm=Ger _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 harvester harvester NOUN NN Number=Sing _ _ _ _ 16 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 well well ADV RB Degree=Pos _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 almost almost ADV RB _ _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 one one NUM CD NumType=Card _ _ _ _ 22 order order NOUN NN Number=Sing _ _ _ _ 23 lower lower ADJ JJR Degree=Cmp _ _ _ _ 24 values value NOUN NNS Number=Plur _ _ _ _ 25 obtained obtaine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 latter latter ADJ JJ Degree=Pos _ _ _ _ 29 method method NOUN NN Number=Sing _ _ _ _ 30 render render VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 it it PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 32 non-applicable non-applicable ADJ JJ Degree=Pos _ _ _ _ 33 for for ADP IN _ _ _ _ _ 34 receptor receptor NOUN NN Number=Sing _ _ _ _ 35 quantitation quantitation NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 4094 # text = The results from 9 healthy volunteers (average GR concentration 7131 +/- 1256 sites/cell) correlated excellently with those obtained by the Scatchard analysis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 9 9 NUM CD NumType=Card _ _ _ _ 5 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 6 volunteers volunteer NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 average average ADJ JJ Degree=Pos _ _ _ _ 9 GR Gr NOUN NN Number=Sing _ _ _ _ 10 concentration concentration NOUN NN Number=Sing _ _ _ _ 11 7131 7131 NUM CD NumType=Card _ _ _ _ 12 +/- +/- SYM SYM _ _ _ _ _ 13 1256 1256 NUM CD NumType=Card _ _ _ _ 14 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 /cell /cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 excellently excellently ADV RB _ _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 21 obtained obtaine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 Scatchard Scatchard PROPN NNP Number=Sing _ _ _ _ 25 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4095 # text = The single point assay has been also applied for determination of GH in 10 children treated with large doses of prednisone. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 single single ADJ JJ Degree=Pos _ _ _ _ 3 point point NOUN NN Number=Sing _ _ _ _ 4 assay assay NOUN NN Number=Sing _ _ _ _ 5 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 applied apply VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 determination determination NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 GH GH PROPN NNP Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 10 10 NUM CD NumType=Card _ _ _ _ 15 children child NOUN NNS Number=Plur _ _ _ _ 16 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 large large ADJ JJ Degree=Pos _ _ _ _ 19 doses dos NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 prednisone prednisone NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4096 # text = The average values from healthy volunteers did not differ significantly from those found in these children, though much broader range was found in patients. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 average average ADJ JJ Degree=Pos _ _ _ _ 3 values value NOUN NNS Number=Plur _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 6 volunteers volunteer NOUN NNS Number=Plur _ _ _ _ 7 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 differ differ VERB VB VerbForm=Inf _ _ _ _ 10 significantly significantly ADV RB _ _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 13 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 16 children child NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 though though ADV RB _ _ _ _ _ 19 much much ADJ JJ Degree=Pos _ _ _ _ 20 broader broader NOUN NN Number=Sing _ _ _ _ 21 range range NOUN NN Number=Sing _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4097 # text = Document 003003670 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003670 003003670 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4098 # text = Interleukin 2 signaling involves the phosphorylation of Stat proteins. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ _ 2 2 2 NUM CD NumType=Card _ _ _ _ 3 signaling signaling NOUN NN Number=Sing _ _ _ _ 4 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Stat Stat PROPN NNP Number=Sing _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4099 # text = One of the most important cytokines involved in immune response regulation is interleukin 2 (IL-2), a potent activator of the proliferation and function of T lymphocytes and natural killer cells. 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 most most ADV RBS _ _ _ _ _ 5 important important ADJ JJ Degree=Pos _ _ _ _ 6 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 7 involved involved ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 immune immune ADJ JJ Degree=Pos _ _ _ _ 10 response response NOUN NN Number=Sing _ _ _ _ 11 regulation regulation NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 interleukin interleukin VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 14 2 2 NUM CD NumType=Card _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 potent potent NOUN NN Number=Sing _ _ _ _ 23 activator activator NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 function function NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 T t PROPN NNP Number=Sing _ _ _ _ 31 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 natural natural ADJ JJ Degree=Pos _ _ _ _ 34 killer killer NOUN NN Number=Sing _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 4100 # text = The mechanisms by which the effects of IL-2 are propagated within cells are not understood. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 effects effect NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 propagated propagate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 within within ADP IN _ _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 understood understand VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4101 # text = While the binding of IL-2 to its receptor was recently shown to lead to the activation of two kinases, Jak-1 and Jak-3, subsequent steps in the signaling pathway to the nucleus that lead to the activation of specific genes had not been characterized. 1 While while SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 binding binding NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 recently recently ADV RB _ _ _ _ _ 13 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 lead lead VERB VB VerbForm=Inf _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 two two NUM CD NumType=Card _ _ _ _ 21 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 Jak Jak PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 Jak Jak PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 32 steps step NOUN NNS Number=Plur _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 signaling signal NOUN NN Number=Sing _ _ _ _ 36 pathway pathway NOUN NN Number=Sing _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 40 that that PRON WDT PronType=Rel _ _ _ _ 41 lead lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 42 to to ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 activation activation NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 specific specific ADJ JJ Degree=Pos _ _ _ _ 47 genes gene NOUN NNS Number=Plur _ _ _ _ 48 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 49 not not PART RB _ _ _ _ _ 50 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 51 characterized characterize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 4102 # text = Since many cytokines that activate Jak kinases also lead to the tyrosine phosphorylation and activation of members of the Stat family of transcription factors, the ability of IL-2 to trigger 1 Since since SCONJ IN _ _ _ _ _ 2 many many ADJ JJ Degree=Pos _ _ _ _ 3 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 activate activate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 Jak Jak PROPN NNP Number=Sing _ _ _ _ 7 kinases kinase NOUN NNS Number=Plur _ _ _ _ 8 also also ADV RB _ _ _ _ _ 9 lead lead VERB VB VerbForm=Inf _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 13 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 members member NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 Stat Stat PROPN NNP Number=Sing _ _ _ _ 21 family family NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 ability ability NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 trigger trigger ADJ JJR Degree=Cmp _ _ _ _ # sent_id = 4103 # text = Stat phosphorylation was examined. 1 Stat Stat NOUN NN Number=Sing _ _ _ _ 2 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 5 . . PUNCT . _ _ _ _ _ # sent_id = 4104 # text = Exposure of activated human T lymphocytes or of a natural killer cell line (NKL) to IL-2 leads to the phosphorylation of Stat1 alpha, Stat1 beta, and Stat3, as well as of two Stat-related proteins, p94 and p95. p94 and p95 share homology with Stat1 at the phosphorylation site and in the Src homology 2 (SH2) domain, but otherwise are immunologically distinct from Stat1. 1 Exposure exposure NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 natural natural ADJ JJ Degree=Pos _ _ _ _ 11 killer killer NOUN NN Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 line line NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 NKL NKL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 leads lead NOUN NNS Number=Plur _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 Stat1 Stat1 PROPN NNP Number=Sing _ _ _ _ 27 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 Stat1 Stat1 PROPN NNP Number=Sing _ _ _ _ 30 beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 Stat3 Stat3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 as as ADV RB _ _ _ _ _ 36 well well ADV RB Degree=Pos _ _ _ _ 37 as as ADP IN _ _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 two two NUM CD NumType=Card _ _ _ _ 40 Stat Stat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - SYM SYM _ _ _ _ SpaceAfter=No 42 related related ADJ JJ Degree=Pos _ _ _ _ 43 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 p94 p94 NOUN NN Number=Sing _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 p95. p95. NOUN NN Number=Sing _ _ _ _ 48 p94 p94 NOUN NN Number=Sing _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 p95 p95 NUM CD NumType=Card _ _ _ _ 51 share share NOUN NN Number=Sing _ _ _ _ 52 homology homology NOUN NN Number=Sing _ _ _ _ 53 with with ADP IN _ _ _ _ _ 54 Stat1 stat1 PROPN NNP Number=Sing _ _ _ _ 55 at at ADP IN _ _ _ _ _ 56 the the DET DT Definite=Def|PronType=Art _ _ _ _ 57 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 58 site site NOUN NN Number=Sing _ _ _ _ 59 and and CCONJ CC _ _ _ _ _ 60 in in ADP IN _ _ _ _ _ 61 the the DET DT Definite=Def|PronType=Art _ _ _ _ 62 Src Src PROPN NNP Number=Sing _ _ _ _ 63 homology homology NOUN NN Number=Sing _ _ _ _ 64 2 2 NUM CD NumType=Card _ _ _ _ 65 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 66 SH2 Sh2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 67 ) ) PUNCT -RRB- _ _ _ _ _ 68 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 69 , , PUNCT , _ _ _ _ _ 70 but but CCONJ CC _ _ _ _ _ 71 otherwise otherwise ADV RB _ _ _ _ _ 72 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 73 immunologically immunologically ADV RB _ _ _ _ _ 74 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 75 from from ADP IN _ _ _ _ _ 76 Stat1 stat1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 77 . . PUNCT . _ _ _ _ _ # sent_id = 4105 # text = These 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ # sent_id = 4106 # text = Stat proteins were found to translocate to the nucleus and to bind to a specific DNA sequence. 1 Stat Stat PROPN NNP Number=Sing _ _ _ _ 2 proteins protein NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 translocate translocate VERB VB VerbForm=Inf _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 bind bind VERB VB VerbForm=Inf _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 specific specific ADJ JJ Degree=Pos _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ _ 17 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4107 # text = These findings suggest a mechanism by which IL-2 binding to its receptor may activate specific genes involved in immune cell function. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 may may AUX MD VerbForm=Fin _ _ _ _ 16 activate activate VERB VB VerbForm=Inf _ _ _ _ 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 genes gene NOUN NNS Number=Plur _ _ _ _ 19 involved involved ADJ JJ Degree=Pos _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 immune immune ADJ JJ Degree=Pos _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4108 # text = Document 003003671 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003671 003003671 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4109 # text = Nuclear factor-90 of activated T-cells: 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 -90 -90 NUM CD NumType=Card _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 : : PUNCT : _ _ _ _ _ # sent_id = 4110 # text = A double-stranded RNA-binding protein and substrate for the double-stranded RNA-dependent protein kinase, PKR. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 stranded strand VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 RNA RNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 binding binding VERB VBG VerbForm=Ger _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 substrate substrate NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 -stranded -stranded ADJ JJ Degree=Pos _ _ _ _ 15 RNA RNa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 PKR PKR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4111 # text = NFAT transcription factors play a central role in initiating T-cell activation through the induction of immediate-early T-cell specific genes including interleukin-2 (IL-2). 1 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 play play VERB VB VerbForm=Inf _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 central central ADJ JJ Degree=Pos _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 in in SCONJ IN _ _ _ _ _ 9 initiating initiat VERB VBG VerbForm=Ger _ _ _ _ 10 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 through through ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 induction induction NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 early early ADJ JJ Degree=Pos _ _ _ _ 20 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 specific specific ADJ JJ Degree=Pos _ _ _ _ 23 genes gene NOUN NNS Number=Plur _ _ _ _ 24 including include VERB VBG VerbForm=Ger _ _ _ _ 25 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4112 # text = NFAT transcription factors bind to a sequence in the IL-2 enhancer known as the antigen receptor response element 2 (ARRE-2). 1 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 sequence sequence NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 14 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 18 receptor receptor NOUN NN Number=Sing _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ _ 20 element element NOUN NN Number=Sing _ _ _ _ 21 2 2 NUM CD NumType=Card _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 ARRE Arre NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4113 # text = Multiple proteins exhibiting ARRE-2 binding activity have been isolated, including a heterodimer from stimulated T-cell nuclear extracts consisting of Mr = 90 000 (NF90) and Mr = 45 000 (NF45) subunits. 1 Multiple multiple ADJ JJ Degree=Pos _ _ _ _ 2 proteins protein NOUN NNS Number=Plur _ _ _ _ 3 exhibiting exhibit VERB VBG VerbForm=Ger _ _ _ _ 4 ARRE Arre ADV RB PronType=Dem _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 binding binding VERB VBG VerbForm=Ger _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 11 isolated isolate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 including include VERB VBG VerbForm=Ger _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 16 from from ADP IN _ _ _ _ _ 17 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 extracts extract NOUN NNS Number=Plur _ _ _ _ 22 consisting consiste VERB VBG VerbForm=Ger _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 Mr mr PROPN NNP Number=Sing _ _ _ _ 25 = = SYM SYM _ _ _ _ _ 26 90 90 NUM CD NumType=Card _ _ _ _ 27 000 000 NUM CD NumType=Card _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 NF90 NF90 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 Mr mr PROPN NNP Number=Sing _ _ _ _ 33 = = SYM SYM _ _ _ _ _ 34 45 45 NUM CD NumType=Card _ _ _ _ 35 000 000 NUM CD NumType=Card _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 NF45 Nf45 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 4114 # text = The subunits of this heterodimer have been cloned, and NF90 was found to encode a protein containing two domains that are predicted to form motifs capable of binding to double-stranded RNA. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 subunits subunit NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 cloned clon VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 NF90 NF90 PROPN NNP Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 encode encode VERB VB VerbForm=Inf _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 containing contain VERB VBG VerbForm=Ger _ _ _ _ 19 two two NUM CD NumType=Card _ _ _ _ 20 domains domain NOUN NNS Number=Plur _ _ _ _ 21 that that PRON WDT PronType=Rel _ _ _ _ 22 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 predicted predict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 form form VERB VB VerbForm=Inf _ _ _ _ 26 motifs motif NOUN NNS Number=Plur _ _ _ _ 27 capable capable ADJ JJ Degree=Pos _ _ _ _ 28 of of SCONJ IN _ _ _ _ _ 29 binding bind VERB VBG VerbForm=Ger _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 stranded strand VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 RNA RNa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4115 # text = Using in vitro translated polypeptides, we have demonstrated that NF90 specifically binds to double-stranded RNA. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 vitro vitro NOUN NN Number=Sing _ _ _ _ 4 translated translate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 polypeptides polypeptide NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 8 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 NF90 NF90 PROPN NNP Number=Sing _ _ _ _ 12 specifically specifically ADV RB _ _ _ _ _ 13 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 double double VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 stranded strand VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 RNA RNa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 4116 # text = Furthermore, NF90 was phosphorylated in a double-stranded RNA-dependent manner likely by the interferon-induced, double-stranded RNA-dependent protein kinase, PKR. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 NF90 NF90 PROPN NNP Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 stranded strand VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 RNA RNa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 14 manner manner NOUN NN Number=Sing _ _ _ _ 15 likely likely ADV RB _ _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 stranded strand VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 RNA RNa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 28 protein protein NOUN NN Number=Sing _ _ _ _ 29 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 PKR PKR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4117 # text = The NF90 protein was found to be expressed not only in T-cells, but also in nonimmune HeLa cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 NF90 NF90 NUM CD NumType=Card _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 not not ADV RB _ _ _ _ _ 10 only only ADV RB _ _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 also also ADV RB _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 nonimmune nonimmune ADJ JJ Degree=Pos _ _ _ _ 19 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4118 # text = In HeLa cells, the protein was almost exclusively localized to the ribosome salt wash fraction of cell lysates. 1 In in ADP IN _ _ _ _ _ 2 HeLa Hela PROPN NNP Number=Sing _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 almost almost ADV RB _ _ _ _ _ 9 exclusively exclusively ADV RB _ _ _ _ _ 10 localized localize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 ribosome ribosome ADJ JJ Degree=Pos _ _ _ _ 14 salt salt NOUN NN Number=Sing _ _ _ _ 15 wash wash NOUN NN Number=Sing _ _ _ _ 16 fraction fraction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 lysates lysate NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4119 # text = Document 003003674 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003674 003003674 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4120 # text = Prolactin and interleukin-2 receptors in T lymphocytes signal through a MGF-STAT5-like transcription factor. 1 Prolactin Prolactin NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 receptors receptor NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 T T PROPN NNP Number=Sing _ _ _ _ 9 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 10 signal signal VERB VB VerbForm=Inf _ _ _ _ 11 through through ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 MGF MGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 STAT5 STAT5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 like like ADJ JJ Degree=Pos _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4121 # text = The cell surface receptors for PRL and interleukin-2 (IL-2) are structurally distinct, but share regulatory tasks in T lymphocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 surface surface NOUN NN Number=Sing _ _ _ _ 4 receptors receptor NOUN NNS Number=Plur _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 PRL pRl NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 structurally structurally ADV RB _ _ _ _ _ 18 distinct distinct ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 share share VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 23 tasks task NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4122 # text = They can stimulate proliferation and activate transcription of over-lapping sets of genes of T cells. 1 They they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 2 can can AUX MD VerbForm=Fin _ _ _ _ 3 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 4 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 activate activate ADJ JJ Degree=Pos _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 over over SCONJ IN _ _ _ _ SpaceAfter=No 10 -lapping -lapp VERB VBG VerbForm=Ger _ _ _ _ 11 sets set NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4123 # text = PRL and IL-2 receptor activation are both linked to the Jak/Stat (signal transducer and activator of transcription) pathway. 1 PRL pRl PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 both both ADV RB _ _ _ _ _ 10 linked link VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 Jak Jak PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 Stat Stat PROPN NNP Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 signal signal NOUN NN Number=Sing _ _ _ _ 18 transducer transducer NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 activator activator NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4124 # text = We investigated the ability of PRL and IL-2 to activate 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 ability ability NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 PRL pRl PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 activate activate VERB VB VerbForm=Inf _ _ _ _ # sent_id = 4125 # text = Stat proteins in different T cell lines. 1 Stat Stat VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 proteins protein NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 different different ADJ JJ Degree=Pos _ _ _ _ 5 T T PROPN NNP Number=Sing _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 4126 # text = The DNA binding specificities, the reactivities toward Stat-specific antisera, and the mol wt of IL-2- and PRL-induced DNA-binding proteins in Nb2 and C196 T cell lines were investigated. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ _ 3 binding binding VERB VBG VerbForm=Ger _ _ _ _ 4 specificities specificity NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 reactivities reactivity NOUN NNS Number=Plur _ _ _ _ 8 toward toward ADP IN _ _ _ _ _ 9 Stat Stat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 specific specific ADJ JJ Degree=Pos _ _ _ _ 12 antisera antisera NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 mol mol NOUN NN Number=Sing _ _ _ _ 17 wt wt NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 PRL pRl NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 binding binding VERB VBG VerbForm=Ger _ _ _ _ 30 proteins protein NOUN NNS Number=Plur _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 Nb2 nb2 NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 C196 C196 PROPN NNP Number=Sing _ _ _ _ 35 T t PROPN NNP Number=Sing _ _ _ _ 36 cell cell NOUN NN Number=Sing _ _ _ _ 37 lines line NOUN NNS Number=Plur _ _ _ _ 38 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 39 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 4127 # text = A comparison with the Stat proteins induced by interferon-gamma, PRL, and IL-6 in T47D mammary tumor cells was made. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 comparison comparison NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 Stat Stat PROPN NNP Number=Sing _ _ _ _ 6 proteins protein NOUN NNS Number=Plur _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 PRL PRL NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 6 6 NUM CD NumType=Card _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 T47D T47d ADJ JJ Degree=Pos _ _ _ _ 21 mammary mammary ADJ JJ Degree=Pos _ _ _ _ 22 tumor tumor NOUN NN Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 made make VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4128 # text = We found that these parameters were indistinguishable for one of the PRL- and IL-2-induced factors. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 parameters parameter NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 indistinguishable indistinguishable ADJ JJ Degree=Pos _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 one one NUM CD NumType=Card _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 PRL pRl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4129 # text = A transcription factor closely related to mammary gland factor-Stat5 is rapidly activated upon interaction of IL-2 and PRL with their respective receptors. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 closely closely ADV RB _ _ _ _ _ 5 related related ADJ JJ Degree=Pos _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 mammary mammary ADJ JJ Degree=Pos _ _ _ _ 8 gland gland NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 Stat5 Stat5 PROPN NNP Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 rapidly rapidly ADV RB _ _ _ _ _ 14 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 upon upon ADP IN _ _ _ _ _ 16 interaction interaction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 PRL pRl NOUN NN Number=Sing _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 25 respective respective ADJ JJ Degree=Pos _ _ _ _ 26 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4130 # text = Activation of a second protein related to Stat1 was also observed. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 related related ADJ JJ Degree=Pos _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 Stat1 Stat1 PROPN NNP Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 also also ADV RB _ _ _ _ _ 11 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 4131 # text = Our results emphasize the role of PRL as a regulator of the immune response and indicate that the Stat factors mammary gland factor-Stat5 and Stat1 play a role in the regulation of gene expression during T cell development. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 emphasize emphasize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 PRL pRl NOUN NN Number=Sing _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 regulator regulator NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 immune immune ADJ JJ Degree=Pos _ _ _ _ 14 response response NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 Stat Stat NOUN NN Number=Sing _ _ _ _ 20 factors factor NOUN NNS Number=Plur _ _ _ _ 21 mammary mammary ADJ JJ Degree=Pos _ _ _ _ 22 gland gland NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 Stat5 stat5 PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 Stat1 stat1 PROPN NNP Number=Sing _ _ _ _ 28 play play VERB VB VerbForm=Inf _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 role role NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 regulation regulation NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 gene gene NOUN NN Number=Sing _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ _ 37 during during ADP IN _ _ _ _ _ 38 T t PROPN NNP Number=Sing _ _ _ _ 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4132 # text = Document 003003682 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003682 003003682 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4133 # text = Mutations in the Pit-1 gene in children with combined pituitary hormone deficiency. 1 Mutations Mutation NOUN NNS Number=Plur _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 Pit pit NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 children child NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 pituitary pituitary NOUN NN Number=Sing _ _ _ _ 13 hormone hormone NOUN NN Number=Sing _ _ _ _ 14 deficiency deficiency NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4134 # text = Pit-1 is a pituitary-specific transcription factor that binds to and transactivates promoters of growth hormone and prolactin genes. 1 Pit pit NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 pituitary pituitary NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 transactivates transactivate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 promoters promoter NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 growth growth NOUN NN Number=Sing _ _ _ _ 19 hormone hormone NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 prolactin prolactin NOUN NN Number=Sing _ _ _ _ 22 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4135 # text = In three unrelated Japanese children with combined pituitary hormone deficiency, we identified three point mutations in the Pit-1 gene, Pro24Leu, Arg143Gln, and Arg271Trp, located on the major transactivation region, POU-specific domain, and POU-homeodomain, respectively. 1 In in ADP IN _ _ _ _ _ 2 three three NUM CD NumType=Card _ _ _ _ 3 unrelated unrelated ADJ JJ Degree=Pos _ _ _ _ 4 Japanese japanese ADJ JJ Degree=Pos _ _ _ _ 5 children child NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 pituitary pituitary NOUN NN Number=Sing _ _ _ _ 9 hormone hormone NOUN NN Number=Sing _ _ _ _ 10 deficiency deficiency NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 13 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 three three NUM CD NumType=Card _ _ _ _ 15 point point NOUN NN Number=Sing _ _ _ _ 16 mutations mutation NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 Pit pit NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 Pro24Leu Pro24Leu PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 Arg143Gln Arg143Gln PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 Arg271 Arg271 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 Trp Trp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 on on ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 major major ADJ JJ Degree=Pos _ _ _ _ 36 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 37 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 POU POU NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 specific specific ADJ JJ Degree=Pos _ _ _ _ 42 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 POU- Pou- NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 homeodomain homeodomain NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4136 # text = Document 003003691 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003691 003003691 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4137 # text = Activation of the HIV-1 enhancer by the LEF-1 HMG protein on nucleosome-assembled DNA in vitro. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 LEF LEF NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 HMG Hmg NOUN NN Number=Sing _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 nucleosome nucleosome ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 assembled assemble VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 DNA dna NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4138 # text = Lymphoid enhancer-binding factor 1 (LEF-1) is a regulatory high mobility group (HMG) protein that activates the T cell receptor alpha (TCR alpha) enhancer in a context-restricted manner in T cells. 1 Lymphoid Lymphoid ADJ JJ Degree=Pos _ _ _ _ 2 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 1 1 NUM CD NumType=Card _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 LEF Lef NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 X LS _ _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 15 high high ADJ JJ Degree=Pos _ _ _ _ 16 mobility mobility NOUN NN Number=Sing _ _ _ _ 17 group group NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 HMG HMG INTJ UH _ _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 T T PROPN NNP Number=Sing _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 receptor receptor NOUN NN Number=Sing _ _ _ _ 28 alpha alpha NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 TCR Tcr NOUN NN Number=Sing _ _ _ _ 31 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 context context NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 manner manner NOUN NN Number=Sing _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 T t PROPN NNP Number=Sing _ _ _ _ 42 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 4139 # text = In this paper we demonstrate that the distal region of the human immunodeficiency virus-1 (HIV-1) enhancer, which contains DNA-binding sites for LEF-1 and Ets-1, also provides a functional context for activation by LEF-1. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 paper paper NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 distal distal ADJ JJ Degree=Pos _ _ _ _ 9 region region NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 14 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 binding binding VERB VBG VerbForm=Ger _ _ _ _ 29 sites site NOUN NNS Number=Plur _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 LEF LEF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 Ets et NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 - - PUNCT , _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 also also ADV RB _ _ _ _ _ 40 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 41 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 functional functional ADJ JJ Degree=Pos _ _ _ _ 43 context context NOUN NN Number=Sing _ _ _ _ 44 for for ADP IN _ _ _ _ _ 45 activation activation NOUN NN Number=Sing _ _ _ _ 46 by by ADP IN _ _ _ _ _ 47 LEF LEF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 4140 # text = First, we show that mutations in the LEF-1-binding site inhibit the activity of multimerized copies of the HIV-1 enhancer in Jurkat T cells, and that LEF-1/GAL4 can activate a GAL4-substituted HIV-1 enhancer 80- to 100-fold in vivo. 1 First first ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 mutations mutation NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 LEF LEF NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ _ 15 inhibit inhibit NOUN NN Number=Sing _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 multimerized multimerize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 copies copy NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 29 T T PROPN NNP Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 that that SCONJ IN _ _ _ _ _ 34 LEF LEF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1/ 1ith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 37 GAL4 GAL4 PROPN NNP Number=Sing _ _ _ _ 38 can can AUX MD VerbForm=Fin _ _ _ _ 39 activate activate VERB VB VerbForm=Inf _ _ _ _ 40 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 41 GAL4 Gal4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 substituted substitute VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 1 1 NUM CD NumType=Card _ _ _ _ 47 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 48 80 80 NUM CD NumType=Card _ _ _ SpaceAfter=No 49 - - PUNCT , _ _ _ _ _ 50 to to ADP IN _ _ _ _ _ 51 100 100 NUM CD NumType=Card _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 fold fold NOUN NN Number=Sing _ _ _ _ 54 in in ADP IN _ _ _ _ _ 55 vivo. vivo. NOUN NN Number=Sing _ _ _ _ # sent_id = 4141 # text = Second, recombinant LEF-1 is shown to activate HIV-1 transcription on chromatin-assembled DNA in vitro. 1 Second second ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 4 LEF LEF NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 activate activate VERB VB VerbForm=Inf _ _ _ _ 11 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 chromatin- chromatin- SYM NFP _ _ _ _ SpaceAfter=No 17 assembled assembled VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 DNA dna NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4142 # text = By using a nucleosome-assembly system derived from Drosophila embryos, we find that the packaging of DNA into chromatin in vitro strongly represses HIV-1 transcription and that repression can be counteracted efficiently by preincubation of the DNA with LEF-1 (or LEF-1 and Ets-1) supplemented with fractions containing the promoter-binding protein, Sp1. 1 By by SCONJ IN _ _ _ _ _ 2 using use VERB VBG VerbForm=Ger _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 nucleosome nucleosome NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 assembly assembly NOUN NN Number=Sing _ _ _ _ 7 system system NOUN NN Number=Sing _ _ _ _ 8 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 Drosophila Drosophila PROPN NNP Number=Sing _ _ _ _ 11 embryos embryo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 find find VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 packaging packaging NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 DNA dna NOUN NN Number=Sing _ _ _ _ 20 into into ADP IN _ _ _ _ _ 21 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 vitro vitro PROPN NNP Number=Sing _ _ _ _ 24 strongly strongly ADV RB _ _ _ _ _ 25 represses repress VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 32 repression repression NOUN NN Number=Sing _ _ _ _ 33 can can AUX MD VerbForm=Fin _ _ _ _ 34 be be AUX VB VerbForm=Inf _ _ _ _ 35 counteracted counteract VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 efficiently efficiently ADV RB _ _ _ _ _ 37 by by ADP IN _ _ _ _ _ 38 preincubation preincubation NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 DNA dna NOUN NN Number=Sing _ _ _ _ 42 with with ADP IN _ _ _ _ _ 43 LEF LEF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT , _ _ _ _ SpaceAfter=No 45 1 1 NUM CD NumType=Card _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 or or CCONJ CC _ _ _ _ _ 48 LEF LEF NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 1 1 NUM CD NumType=Card _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 Ets ets PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 53 - - PUNCT , _ _ _ _ SpaceAfter=No 54 1 1 X LS _ _ _ _ SpaceAfter=No 55 ) ) PUNCT -RRB- _ _ _ _ _ 56 supplemented supplement VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 57 with with ADP IN _ _ _ _ _ 58 fractions fraction NOUN NNS Number=Plur _ _ _ _ 59 containing contain VERB VBG VerbForm=Ger _ _ _ _ 60 the the DET DT Definite=Def|PronType=Art _ _ _ _ 61 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 62 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 63 binding binding VERB VBG VerbForm=Ger _ _ _ _ 64 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 65 , , PUNCT , _ _ _ _ _ 66 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 67 . . PUNCT . _ _ _ _ _ # sent_id = 4143 # text = Addition of TFE-3, which binds to an E-box motif upstream of the LEF-1 and Ets-1 sites, further augments transcription in this system. 1 Addition Addition PROPN NNP Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 TFE TFE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 box box NOUN NN Number=Sing _ _ _ _ 13 motif motif NOUN NN Number=Sing _ _ _ _ 14 upstream upstream NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 LEF LEF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 Ets Et NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 further further ADJ JJ Degree=Pos _ _ _ _ 27 augments augment NOUN NNS Number=Plur _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 31 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4144 # text = Individually or collectively, none of the three enhancer-binding proteins (LEF-1, Ets-1, and TFE-3) could activate transcription in the absence of Sp1. 1 Individually individually ADV RB _ _ _ _ _ 2 or or CCONJ CC _ _ _ _ _ 3 collectively collectively ADV RB _ _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 none none NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 three three NUM CD NumType=Card _ _ _ _ 9 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 proteins protein NOUN NNS Number=Plur _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 LEF LEF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 Ets ets PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 18 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 TFE TFE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 3 3 X LS _ _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 could could AUX MD VerbForm=Fin _ _ _ _ 26 activate activate VERB VB VerbForm=Inf _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 absence absence NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 Sp1 sp1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4145 # text = A truncation mutant of LEF-1 (HMG-88), which contains the HMG box but lacks the trans-activation domain, did not activate transcription from nucleosomal DNA, indicating that bending of DNA by the HMG domain is not sufficient to activate transcription in vitro. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 truncation truncation NOUN NN Number=Sing _ _ _ _ 3 mutant mutant NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 LEF LEF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 HMG Hmg NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 88 88 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 HMG Hmg NOUN NN Number=Sing _ _ _ _ 18 box box NOUN NN Number=Sing _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 lacks lack VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 not not PART RB _ _ _ _ _ 29 activate activate VERB VB VerbForm=Inf _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ _ 31 from from ADP IN _ _ _ _ _ 32 nucleosomal nucleosomal ADJ JJ Degree=Pos _ _ _ _ 33 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 36 that that SCONJ IN _ _ _ _ _ 37 bending bend VERB VBG VerbForm=Ger _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 DNA dna NOUN NN Number=Sing _ _ _ _ 40 by by ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 HMG HMG PROPN NNP Number=Sing _ _ _ _ 43 domain domain NOUN NN Number=Sing _ _ _ _ 44 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 45 not not PART RB _ _ _ _ _ 46 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 47 to to PART TO _ _ _ _ _ 48 activate activate VERB VB VerbForm=Inf _ _ _ _ 49 transcription transcription NOUN NN Number=Sing _ _ _ _ 50 in in ADP IN _ _ _ _ _ 51 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 4146 # text = We conclude that transcription activation by LEF-1 in vitro is a chromatin-dependent process that requires a functional trans-activation domain in addition to the HMG domain. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 LEF LEF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 vitro vitro NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 chromatin chromatin NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 17 process process NOUN NN Number=Sing _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 functional functional ADJ JJ Degree=Pos _ _ _ _ 22 trans- trans- SYM NFP _ _ _ _ SpaceAfter=No 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 domain domain NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 addition addition NOUN NN Number=Sing _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 HMG HMG PROPN NNP Number=Sing _ _ _ _ 30 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4147 # text = Document 003003692 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003692 003003692 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4148 # text = Lymphocyte cell lines from vitamin D-dependent rickets type II show functional defects in the 1 alpha,25-dihydroxyvitamin D3 receptor. 1 Lymphocyte Lymphocyte ADJ JJ Degree=Pos _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 lines line NOUN NNS Number=Plur _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 vitamin vitamin NOUN NNS Number=Plur _ _ _ _ 6 D- D- PUNCT : _ _ _ _ SpaceAfter=No 7 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 8 rickets ricket NOUN NNS Number=Plur _ _ _ _ 9 type type NOUN NN Number=Sing _ _ _ _ 10 II II PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 functional functional ADJ JJ Degree=Pos _ _ _ _ 13 defects defect NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 1 1 NUM CD NumType=Card _ _ _ _ 17 alpha,25 alpha,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 -dihydroxyvitamin -dihydroxyvitamin NOUN NN Number=Sing _ _ _ _ 19 D3 D3 NUM CD NumType=Card _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4149 # text = Lymphocyte cell lines were established from five patients with vitamin D-dependent rickets, type II (VDDR-II). 1 Lymphocyte Lymphocyte ADJ JJ Degree=Pos _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 lines line NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 established establish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 five five NUM CD NumType=Card _ _ _ _ 8 patients patient NOUN NN Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 vitamin vitamin NOUN NNS Number=Plur _ _ _ _ 11 D- D- PUNCT , _ _ _ _ SpaceAfter=No 12 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 13 rickets ricket NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 type type NOUN NN Number=Sing _ _ _ _ 16 II ii NUM CD NumType=Card _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 VDDR Vddr NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4150 # text = These lines were established by infection with human T-lymphotrophic virus type I (HTLV-I). 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 lines line NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 established establish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 infection infection NOUN NN Number=Sing _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 T- T- PUNCT , _ _ _ _ SpaceAfter=No 10 lymphotrophic lymphotrophic ADJ JJ Degree=Pos _ _ _ _ 11 virus virus NOUN NN Number=Sing _ _ _ _ 12 type type NOUN NN Number=Sing _ _ _ _ 13 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 4151 # text = Binding of [3H]1 alpha,25-dihydroxyvitamin D3 (1,25(OH)2D3) to its receptor in these cell lines was compared to binding studies using a T-lymphocyte cell line (S-LB1) from a normal individual. 1 Binding binding NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 3H 3H PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 alpha,25-dihydroxyvitamin alpha,25-dihydroxyvitamin NOUN NN Number=Sing _ _ _ _ 8 D3 D3 NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 OH Oh INTJ UH _ _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 2D3 2D3 X LS _ _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 receptor receptor NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 lines line NOUN NNS Number=Plur _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 compared compare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 binding bind VERB VBG VerbForm=Ger _ _ _ _ 27 studies study NOUN NNS Number=Plur _ _ _ _ 28 using use VERB VBG VerbForm=Ger _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 line line NOUN NN Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 S s PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 LB1 Lb1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 from from ADP IN _ _ _ _ _ 40 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 41 normal normal ADJ JJ Degree=Pos _ _ _ _ 42 individual individual NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 4152 # text = The 1,25(OH)2D3 receptor of S-LB1 was comparable to the well-characterized chick intestinal 1,25(OH)2D3 receptor in terms of its ligand binding affinity and capacity, its mobility on 5-20% sucrose gradients, and its adsorption to and elution properties from DNA-cellulose. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 6 2D3 2D3 NUM CD NumType=Card _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 S S PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 LB1 LB1 PROPN NNP Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 comparable comparable ADJ JJ Degree=Pos _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 well well ADV RB Degree=Pos _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 chick chick NOUN NN Number=Sing _ _ _ _ 20 intestinal intestinal ADJ JJ Degree=Pos _ _ _ _ 21 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 2D3 2D3 NUM CD NumType=Card _ _ _ _ 26 receptor receptor NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 terms term NOUN NNS Number=Plur _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 31 ligand ligand NOUN NN Number=Sing _ _ _ _ 32 binding binding VERB VBG VerbForm=Ger _ _ _ _ 33 affinity affinity NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 capacity capacity NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 38 mobility mobility NOUN NN Number=Sing _ _ _ _ 39 on on ADP IN _ _ _ _ _ 40 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 - - SYM SYM _ _ _ _ SpaceAfter=No 42 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 % % SYM NN Number=Sing _ _ _ _ 44 sucrose sucrose DET DT Number=Plur|PronType=Dem _ _ _ _ 45 gradients gradient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 49 adsorption adsorption NOUN NN Number=Sing _ _ _ _ 50 to to ADP IN _ _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 elution elution NOUN NN Number=Sing _ _ _ _ 53 properties property NOUN NNS Number=Plur _ _ _ _ 54 from from ADP IN _ _ _ _ _ 55 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 57 cellulose cellulose NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 4153 # text = Three cell lines established from patients with VDDR-II (Rh-VDR, Sh-VDR, and Ab-VDR) showed no specific binding of 1,25(OH)2D3 to a receptor and treatment of the cultured cells with 1,25(OH)2D3 did not stimulate production of 24,25-dihydroxy-vitamin D3 (24,25(OH)2D3), a response which is diagnostic of the presence of a functional 1,25(OH)2D3 receptor. 1 Three three NUM CD NumType=Card _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 lines line NOUN NNS Number=Plur _ _ _ _ 4 established establish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 patients patient NOUN NN Number=Sing _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 VDDR VDDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 II II PROPN NNP Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 Rh- Rh- SYM NFP _ _ _ _ SpaceAfter=No 13 VDR VDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 Sh Sh PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 VDR VDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 Ab Ab PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 VDR VDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 no no DET DT _ _ _ _ _ 26 specific specific ADJ JJ Degree=Pos _ _ _ _ 27 binding binding NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 OH oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 2D3 2D3 NUM CD NumType=Card _ _ _ _ 34 to to ADP IN _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 receptor receptor NOUN NN Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 treatment treatment NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 cultured culture ADJ JJ Degree=Pos _ _ _ _ 42 cells cell NOUN NNS Number=Plur _ _ _ _ 43 with with ADP IN _ _ _ _ _ 44 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 48 2D3 2D3 NUM CD NumType=Card _ _ _ _ 49 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 50 not not PART RB _ _ _ _ _ 51 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 52 production production NOUN NN Number=Sing _ _ _ _ 53 of of ADP IN _ _ _ _ _ 54 24,25 24,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 55 -dihydroxy- -dihydroxy- PUNCT : _ _ _ _ SpaceAfter=No 56 vitamin vitamin NOUN NN Number=Sing _ _ _ _ 57 D3 D3 NOUN NN Number=Sing _ _ _ _ 58 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 59 24,25 24,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 60 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 61 OH oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 62 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 63 2D3 2D3 NUM CD NumType=Card _ _ _ SpaceAfter=No 64 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 65 , , PUNCT , _ _ _ _ _ 66 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 67 response response NOUN NN Number=Sing _ _ _ _ 68 which which PRON WDT PronType=Rel _ _ _ _ 69 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 70 diagnostic diagnostic ADJ JJ Degree=Pos _ _ _ _ 71 of of ADP IN _ _ _ _ _ 72 the the DET DT Definite=Def|PronType=Art _ _ _ _ 73 presence presence NOUN NN Number=Sing _ _ _ _ 74 of of ADP IN _ _ _ _ _ 75 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 76 functional functional ADJ JJ Degree=Pos _ _ _ _ 77 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 78 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 79 OH oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 80 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 81 2D3 2D3 NUM CD NumType=Card _ _ _ _ 82 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 83 . . PUNCT . _ _ _ _ _ # sent_id = 4154 # text = In a fourth cell line, A1-VDR, the receptor for 1,25(OH)2D3 had a low binding capacity and 25(OH)D3-24-hydroxylase activity was not detectable. 1 In in ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 fourth fourth ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 A1 A1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 VDR VDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 2D3 2D3 NUM CD NumType=Card _ _ _ _ 19 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 low low ADJ JJ Degree=Pos _ _ _ _ 22 binding binding NOUN NN Number=Sing _ _ _ _ 23 capacity capacity NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 25 25 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 OH oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 D d NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 3- 3- PUNCT : _ _ _ _ SpaceAfter=No 31 24 24 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 hydroxylase hydroxylase NOUN NN Number=Sing _ _ _ _ 34 activity activity NOUN NN Number=Sing _ _ _ _ 35 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 36 not not PART RB _ _ _ _ _ 37 detectable detectable ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 4155 # text = Induction of 24,25-(OH)2D3 synthesis by 1,25(OH)2D3 was observed in the fifth cell line, designated Ro-VDR, although the sensitivity to hormone treatment was lower than in the control cell line from a normal donor. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 24,25 24,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 -( -( PUNCT . _ _ _ _ SpaceAfter=No 5 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 7 2D3 2D3 NUM CD NumType=Card _ _ _ _ 8 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 OH Oh INTJ UH _ _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 2D3 2D3 NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 fifth fifth ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 Ro Ro PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 VDR VDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 although although SCONJ IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 hormone hormone VERB VB VerbForm=Inf _ _ _ _ 33 treatment treatment NOUN NN Number=Sing _ _ _ _ 34 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 35 lower lower ADJ JJR Degree=Cmp _ _ _ _ 36 than than ADP IN _ _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 control control NOUN NN Number=Sing _ _ _ _ 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 line line NOUN NN Number=Sing _ _ _ _ 42 from from ADP IN _ _ _ _ _ 43 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 44 normal normal ADJ JJ Degree=Pos _ _ _ _ 45 donor donor NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 4156 # text = The capacity of the receptor for 1,25(OH)2D3 was low in Ro-VDR. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 capacity capacity NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 OH Oh INTJ UH _ _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 2D3 2D3 NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 low low ADJ JJ Degree=Pos _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 Ro Ro PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 VDR VDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4157 # text = In all cell lines where 1,25(OH)2D3 binding to a receptor was detectable, the receptor had the typical sedimentation coefficient of 3.7 S on sucrose density gradient analysis. 1 In in ADP IN _ _ _ _ _ 2 all all DET DT _ _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 lines line NOUN NNS Number=Plur _ _ _ _ 5 where where ADV WRB PronType=Int _ _ _ _ 6 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 2D3 2D3 NUM CD NumType=Card _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 detectable detectable ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 receptor receptor NOUN NN Number=Sing _ _ _ _ 20 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 typical typical ADJ JJ Degree=Pos _ _ _ _ 23 sedimentation sedimentation NOUN NN Number=Sing _ _ _ _ 24 coefficient coefficient NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 3.7 3.7 NUM CD NumType=Card _ _ _ _ 27 S s NOUN NN Number=Sing _ _ _ _ 28 on on ADP IN _ _ _ _ _ 29 sucrose sucrose NOUN NN Number=Sing _ _ _ _ 30 density density NOUN NN Number=Sing _ _ _ _ 31 gradient gradient NOUN NN Number=Sing _ _ _ _ 32 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4158 # text = Binding and elution properties to DNA-cellulose, however, differed from normal in both Ro-VDR and A1-VDR cells where elution from DNA-cellulose occurred at a lower salt concentration than is typical of the 1,25(OH)2D3 receptor. 1 Binding binding NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 elution elution NOUN NN Number=Sing _ _ _ _ 4 properties property NOUN NNS Number=Plur _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 DNA Dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 cellulose cellulose NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 however however ADV RB _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 differed differ VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 normal normal ADJ JJ Degree=Pos _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 both both CCONJ CC _ _ _ _ _ 17 Ro Ro PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 -VDR -VDR PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 A1 A1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 VDR VDR PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 where where ADV WRB PronType=Rel _ _ _ _ 25 elution elution NOUN NN Number=Sing _ _ _ _ 26 from from ADP IN _ _ _ _ _ 27 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 cellulose cellulose NOUN NN Number=Sing _ _ _ _ 30 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 at at ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 lower lower ADJ JJR Degree=Cmp _ _ _ _ 34 salt salt NOUN NN Number=Sing _ _ _ _ 35 concentration concentration NOUN NN Number=Sing _ _ _ _ 36 than than ADP IN _ _ _ _ _ 37 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 typical typical ADJ JJ Degree=Pos _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 OH oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 45 2D3 2D3 NUM CD NumType=Card _ _ _ _ 46 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 4159 # text = While Ro-VDR cells showed typical nuclear localization of the unoccupied 1,25(OH)2D3 receptor, neither the unoccupied nor the occupied receptor from A1-VDR cells was completely localized in the nucleus. 1 While while SCONJ IN _ _ _ _ _ 2 Ro Ro PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 VDR VDR PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 typical typical ADJ JJ Degree=Pos _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 localization localization NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 unoccupied unoccupied ADJ JJ Degree=Pos _ _ _ _ 13 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 OH oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 2D3 2D3 NUM CD NumType=Card _ _ _ _ 18 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 neither neither CCONJ CC _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 unoccupied unoccupied ADJ JJ Degree=Pos _ _ _ _ 23 nor nor CCONJ CC _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 occupied occupy VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 receptor receptor NOUN NN Number=Sing _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 A1 A1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 VDR VDR PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 33 completely completely ADV RB _ _ _ _ _ 34 localized localize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 4160 # text = In a series of functional studies we found that modulation of the level of the mRNAs coding for both the c-myc oncogene and the growth factor known as granulocyte-monocyte colony stimulating activity by 1,25(OH)2D3 correlated with the 1,25(OH)2D3 receptor status of these cells. 1 In in ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 series series NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 functional functional ADJ JJ Degree=Pos _ _ _ _ 6 studies study NOUN NNS Number=Plur _ _ _ _ 7 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 8 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 10 modulation modulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 level level NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 mRNAs mRNAs NOUN NNS Number=Plur _ _ _ _ 17 coding code VERB VBG VerbForm=Ger _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 both both CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 c- c- SYM NFP _ _ _ _ SpaceAfter=No 22 myc myc ADJ JJ Degree=Pos _ _ _ _ 23 oncogene oncogene NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 growth growth NOUN NN Number=Sing _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ _ 28 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 as as ADP IN _ _ _ _ _ 30 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 33 colony colony NOUN NN Number=Sing _ _ _ _ 34 stimulating stimulate VERB VBG VerbForm=Ger _ _ _ _ 35 activity activity NOUN NN Number=Sing _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 2D3 2D3 NUM CD NumType=Card _ _ _ _ 42 correlated correlate ADJ JJ Degree=Pos _ _ _ _ 43 with with ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 49 2D3 2D3 NUM CD NumType=Card _ _ _ _ 50 receptor receptor NOUN NN Number=Sing _ _ _ _ 51 status status NOUN NN Number=Sing _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 54 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 4161 # text = Use of these cell lines will facilitate further study of the molecular defect(s) in the receptor for 1,25(OH)2D3 in vitamin D-dependent rickets type II and will allow a correlation with impairment of cellular functions. 1 Use use ADP IN _ _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 lines line NOUN NNS Number=Plur _ _ _ _ 6 will will AUX MD VerbForm=Fin _ _ _ _ 7 facilitate facilitate VERB VB VerbForm=Inf _ _ _ _ 8 further further ADJ JJ Degree=Pos _ _ _ _ 9 study study NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 13 defect defect NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 s s X AFX _ _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 receptor receptor NOUN NN Number=Sing _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 OH oh INTJ UH _ _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 2D3 2D3 NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 vitamin vitamin NOUN NNS Number=Plur _ _ _ _ 28 D- D- SYM SYM _ _ _ _ SpaceAfter=No 29 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 30 rickets ricket NOUN NNS Number=Plur _ _ _ _ 31 type type VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 32 II ii NUM CD NumType=Card _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 will will AUX MD VerbForm=Fin _ _ _ _ 35 allow allow VERB VB VerbForm=Inf _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 correlation correlation NOUN NN Number=Sing _ _ _ _ 38 with with ADP IN _ _ _ _ _ 39 impairment impairment NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 42 functions function NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4162 # text = Document 003003693 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003693 003003693 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4163 # text = Activation of human monocytic cells by Treponema pallidum and Borrelia burgdorferi lipoproteins and synthetic lipopeptides proceeds via a pathway distinct from that of lipopolysaccharide but involves the transcriptional activator NF-kappa B. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 Treponema Treponema PROPN NNP Number=Sing _ _ _ _ 8 pallidum pallidum PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 Borrelia Borrelia PROPN NNP Number=Sing _ _ _ _ 11 burgdorferi burgdorferi ADJ JJ Degree=Pos _ _ _ _ 12 lipoproteins lipoprotein NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 15 lipopeptides lipopeptide NOUN NNS Number=Plur _ _ _ _ 16 proceeds proceed VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 via via ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 pathway pathway NOUN NN Number=Sing _ _ _ _ 20 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 25 but but CCONJ CC _ _ _ _ _ 26 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 29 activator activator NOUN NN Number=Sing _ _ _ _ 30 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappa kappa NOUN NN Number=Sing _ _ _ _ 33 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4164 # text = There is increasing evidence that lipoproteins of Treponema pallidum and Borrelia burgdorferi are key inflammatory mediators during syphilis and Lyme disease. 1 There there PRON EX _ _ _ _ _ 2 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 4 evidence evidence NOUN NN Number=Sing _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 lipoproteins lipoprotein NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Treponema Treponema PROPN NNP Number=Sing _ _ _ _ 9 pallidum pallidum PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 Borrelia Borrelia PROPN NNP Number=Sing _ _ _ _ 12 burgdorferi burgdorferus PRON PRP _ _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 key key ADJ JJ Degree=Pos _ _ _ _ 15 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 16 mediators mediator NOUN NNS Number=Plur _ _ _ _ 17 during during ADP IN _ _ _ _ _ 18 syphilis syphilis NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 Lyme Lyme ADJ JJ Degree=Pos _ _ _ _ 21 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4165 # text = A principal objective of the present study was to identify more precisely similarities and divergences among lipopolysaccharide (LPS)- and lipoprotein-lipopeptide-induced immune cell signaling events. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 principal principal ADJ JJ Degree=Pos _ _ _ _ 3 objective objective NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 present present ADJ JJ Degree=Pos _ _ _ _ 7 study study NOUN NN Number=Sing _ _ _ _ 8 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 identify identify VERB VB VerbForm=Inf _ _ _ _ 11 more more ADV RBR _ _ _ _ _ 12 precisely precisely ADV RB _ _ _ _ _ 13 similarities similarity NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 divergences divergence NOUN NNS Number=Plur _ _ _ _ 16 among among ADP IN _ _ _ _ _ 17 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 LPS LPS INTJ UH _ _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 lipoprotein-lipopeptide lipoprotein-lipopeptide NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 immune immune NOUN NN Number=Sing _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 signaling signaling VERB VBG VerbForm=Ger _ _ _ _ 29 events event NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4166 # text = Like LPS, purified native B. burgdorferi OspA and synthetic analogs of OspA, OspB, and two T. pallidum lipoproteins (Tpp47 and Tpp17) all induced NF-kappa B translocation in THP-1 human monocytoid cells. 1 Like like ADP IN _ _ _ _ _ 2 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 purified purify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 native native ADJ JJ Degree=Pos _ _ _ _ 6 B. B. PROPN NNP Number=Sing _ _ _ _ 7 burgdorferi burgdorferi PROPN NNP Number=Sing _ _ _ _ 8 OspA OspA PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 11 analogs analog NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 OspA OspA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 OspB OspB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 two two NUM CD NumType=Card _ _ _ _ 19 T. T. NOUN NN Number=Sing _ _ _ _ 20 pallidum pallidum NOUN NN Number=Sing _ _ _ _ 21 lipoproteins lipoprotein NOUN NNS Number=Plur _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 Tpp47 Tpp47 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 Tpp17 Tpp17 NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 all all DET DT _ _ _ _ _ 28 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappa kappa NOUN NN Number=Sing _ _ _ _ 32 B b NOUN NN Number=Sing _ _ _ _ 33 translocation translocation NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 THP THP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT , _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ _ 38 human human ADJ JJ Degree=Pos _ _ _ _ 39 monocytoid monocytoid NOUN NN Number=Sing _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 4167 # text = Acylation of OspA and the synthetic peptides was requisite for cell activation. 1 Acylation Acylation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 OspA OspA PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 7 peptides peptide NOUN NNS Number=Plur _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 requisite requisite VERB VB VerbForm=Inf _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 4168 # text = Polymyxin B abrogated only the response to LPS. 1 Polymyxin Polymyxin PROPN NNP Number=Sing _ _ _ _ 2 B B PROPN NNP Number=Sing _ _ _ _ 3 abrogated abrogate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 only only ADV RB _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 response response NOUN NN Number=Sing _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 4169 # text = By using 70Z/3-derived pre-B-cell lines either lacking or expressing human CD14 (the LPS receptor), it was observed that expression of human CD14 imparted responsiveness to LPS but not to OspA or spirochetal lipopeptides (assessed by induction of NF-kappa B and expression of surface immunoglobulin M). 1 By by SCONJ IN _ _ _ _ _ 2 using use VERB VBG VerbForm=Ger _ _ _ _ 3 70Z/3 70Z/3 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 pre pre X AFX _ _ _ _ SpaceAfter=No 7 -B -b NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 lines line NOUN NNS Number=Plur _ _ _ _ 11 either either CCONJ CC _ _ _ _ _ 12 lacking lack NOUN NN Number=Sing _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 14 14 NUM CD NumType=Card _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 LPS LPS ADJ JJ Degree=Pos _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 25 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 26 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 14 14 NUM CD NumType=Card _ _ _ _ 33 imparted impart VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 LPS LPS PROPN NNP Number=Sing _ _ _ _ 37 but but CCONJ CC _ _ _ _ _ 38 not not ADV RB _ _ _ _ _ 39 to to ADP IN _ _ _ _ _ 40 OspA OspA PROPN NNP Number=Sing _ _ _ _ 41 or or CCONJ CC _ _ _ _ _ 42 spirochetal spirochetal ADJ JJ Degree=Pos _ _ _ _ 43 lipopeptides lipopeptide NOUN NNS Number=Plur _ _ _ _ 44 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 45 assessed assess VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 by by ADP IN _ _ _ _ _ 47 induction induction NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 kappa kappa NOUN NN Number=Sing _ _ _ _ 52 B b NOUN NN Number=Sing _ _ _ _ 53 and and CCONJ CC _ _ _ _ _ 54 expression expression NOUN NN Number=Sing _ _ _ _ 55 of of ADP IN _ _ _ _ _ 56 surface surface NOUN NN Number=Sing _ _ _ _ 57 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 58 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 4170 # text = Finally, the biological relevance of the observation that T. pallidum lipoproteins-lipopeptides induce both NF-kappa B and cytokine production in monocytes was supported by the ability of the synthetic analogs to promote human immunodeficiency virus replication in chronically infected U1 monocytoid cells; these observations also suggest a potential mechanism whereby a syphilitic chancre can serve as a cofactor for human immunodeficiency virus transmission. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 biological biological ADJ JJ Degree=Pos _ _ _ _ 5 relevance relevance NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 observation observation NOUN NN Number=Sing _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 T. T. PROPN NNP Number=Sing _ _ _ _ 11 pallidum pallidum NOUN NN Number=Sing _ _ _ _ 12 lipoproteins lipoprotein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 lipopeptides lipopeptide NOUN NNS Number=Plur _ _ _ _ 15 induce induce NOUN NN Number=Sing _ _ _ _ 16 both both CCONJ CC _ _ _ _ _ 17 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 23 production production NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 supported support VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 ability ability NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 34 analogs analog NOUN NNS Number=Plur _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 promote promote VERB VB VerbForm=Inf _ _ _ _ 37 human human ADJ JJ Degree=Pos _ _ _ _ 38 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 39 virus virus NOUN NN Number=Sing _ _ _ _ 40 replication replication NOUN NN Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 chronically chronically ADV RB _ _ _ _ _ 43 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 U1 u1 NUM CD NumType=Card _ _ _ _ 45 monocytoid monocytoid ADJ JJ Degree=Pos _ _ _ _ 46 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 ; ; PUNCT , _ _ _ _ _ 48 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 49 observations observation NOUN NNS Number=Plur _ _ _ _ 50 also also ADV RB _ _ _ _ _ 51 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 52 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 53 potential potential ADJ JJ Degree=Pos _ _ _ _ 54 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 55 whereby whereby ADP IN _ _ _ _ _ 56 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 57 syphilitic syphilitic ADJ JJ Degree=Pos _ _ _ _ 58 chancre chancre NOUN NN Number=Sing _ _ _ _ 59 can can AUX MD VerbForm=Fin _ _ _ _ 60 serve serve VERB VB VerbForm=Inf _ _ _ _ 61 as as ADP IN _ _ _ _ _ 62 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 63 cofactor cofactor NOUN NN Number=Sing _ _ _ _ 64 for for ADP IN _ _ _ _ _ 65 human human ADJ JJ Degree=Pos _ _ _ _ 66 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 67 virus virus NOUN NN Number=Sing _ _ _ _ 68 transmission transmission NOUN NN Number=Sing _ _ _ SpaceAfter=No 69 . . PUNCT . _ _ _ _ _ # sent_id = 4171 # text = The combined data lend additional support to the proposal that spirochetal lipoproteins and LPS initiate monocyte activation via different cell surface events but that the signaling pathways ultimately converge to produce qualitatively similar cellular responses. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 data data NOUN NN Number=Sing _ _ _ _ 4 lend lend NOUN NN Number=Sing _ _ _ _ 5 additional additional ADJ JJ Degree=Pos _ _ _ _ 6 support support NOUN NN Number=Sing _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 proposal proposal NOUN NN Number=Sing _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 spirochetal spirochetal ADJ JJ Degree=Pos _ _ _ _ 12 lipoproteins lipoprotein NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 LPS Lp NOUN NNS Number=Plur _ _ _ _ 15 initiate initiate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 monocyte monocyte ADJ JJ Degree=Pos _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 via via ADP IN _ _ _ _ _ 19 different different ADJ JJ Degree=Pos _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 surface surface NOUN NN Number=Sing _ _ _ _ 22 events event NOUN NNS Number=Plur _ _ _ _ 23 but but CCONJ CC _ _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 signaling signaling NOUN NN Number=Sing _ _ _ _ 27 pathways pathway NOUN NNS Number=Plur _ _ _ _ 28 ultimately ultimately ADV RB _ _ _ _ _ 29 converge converge ADJ JJ Degree=Pos _ _ _ _ 30 to to PART TO _ _ _ _ _ 31 produce produce VERB VB VerbForm=Inf _ _ _ _ 32 qualitatively qualitatively ADV RB _ _ _ _ _ 33 similar similar ADJ JJ Degree=Pos _ _ _ _ 34 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 35 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4172 # text = Document 003003702 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003702 003003702 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4173 # text = The Epstein-Barr virus latency BamHI-Q promoter is positively regulated by STATs and Zta interference with JAK/STAT activation leads to loss of BamHI-Q promoter activity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 Barr Barr PROPN NNP Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 latency latency NOUN NN Number=Sing _ _ _ _ 7 BamHI BamHI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Q q PROPN NNP Number=Sing _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 positively positively ADV RB _ _ _ _ _ 13 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 STATs STATs PROPN NNPS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 Zta Zta PROPN NNP Number=Sing _ _ _ _ 18 interference interference NOUN NN Number=Sing _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 JAK JAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 STAT Stat PROPN NNP Number=Sing _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 loss loss VERB VB VerbForm=Inf _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 BamHI BamHI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 Q q PROPN NNP Number=Sing _ _ _ _ 31 promoter promoter NOUN NN Number=Sing _ _ _ _ 32 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4174 # text = In Epstein-Barr virus (EBV)-associated tumors in nonimmunocompromised patients, EBV gene expression is highly restricted. 1 In in ADP IN _ _ _ _ _ 2 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 Barr Barr PROPN NNP Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 tumors tumor NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 nonimmunocompromised nonimmunocompromise ADJ JJ Degree=Pos _ _ _ _ 14 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 EBV EBV PROPN NNP Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 highly highly ADV RB _ _ _ _ _ 21 restricted restrict VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4175 # text = EBV-encoded nuclear antigen (EBNA)-1 is expressed, whereas the immunogenic and proliferative EBNAs are not. 1 EBV haEbve PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 encoded encod VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 antigen antigen NOUN NNS Number=Plur _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 whereas whereas SCONJ IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 immunogenic immunogenic ADJ JJ Degree=Pos _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 19 EBNAs EBNA NOUN NNS Number=Plur _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4176 # text = This pattern of EBNA expression is generated by usage of the BamHI-Q promoter (Qp). 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 pattern pattern NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 EBNA EBNA PROPN NNP Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 generated generate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 usage usage NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 BamHI BamHI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 Q q PROPN NNP Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 Qp Qp NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 4177 # text = We have determined that the JAK/STAT pathway positively regulates Qp activity. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 JAK JAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 STAT Stat PROPN NNP Number=Sing _ _ _ _ 9 pathway pathway NOUN NN Number=Sing _ _ _ _ 10 positively positively ADV RB _ _ _ _ _ 11 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 Qp Qp ADJ JJ Degree=Pos _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 4178 # text = In transient-transfection assays, a Qp-CAT reporter was activated by cotransfected JAK-1 and by treatment of cells with the cytokine IL-6. 1 In in ADP IN _ _ _ _ _ 2 transient transient ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 transfection transfection NOUN NN Number=Sing _ _ _ _ 5 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 Qp Qp NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 CAT cat NOUN NN Number=Sing _ _ _ _ 11 reporter reporter NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 cotransfected cotransfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 JAK JAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 treatment treatment NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 27 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4179 # text = The ability of Qp to bind signal transducer and activator of transcription (STAT) proteins was directly demonstrated by electrophoretic mobility-shift assay, and mutation of potential STAT-binding sites reduced Qp responsiveness to Janus kinase (JAK)-1. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ability ability NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Qp Qp PROPN NNP Number=Sing _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 bind bind VERB VB VerbForm=Inf _ _ _ _ 7 signal signal NOUN NN Number=Sing _ _ _ _ 8 transducer transducer NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 activator activator NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 STAT Stat NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 proteins protein NOUN NNS Number=Plur _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 directly directly ADV RB _ _ _ _ _ 19 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 22 mobility mobility NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 shift shift NOUN NN Number=Sing _ _ _ _ 25 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 mutation mutation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 potential potential ADJ JJ Degree=Pos _ _ _ _ 31 STAT Stat NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 binding binding VERB VBG VerbForm=Ger _ _ _ _ 34 sites site NOUN NNS Number=Plur _ _ _ _ 35 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 Qp Qp PROPN NNP Number=Sing _ _ _ _ 37 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 38 to to ADP IN _ _ _ _ _ 39 Janus Janus PROPN NNP Number=Sing _ _ _ _ 40 kinase kinase NOUN NN Number=Sing _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 JAK JAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 44 - - SYM SYM _ _ _ _ SpaceAfter=No 45 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 4180 # text = Consistent with a role for STATs in Qp function, Qp using Burkitt's lymphoma Rael cells and cultured nasopharyngeal carcinoma (NPC) cells contained nuclear 1 Consistent consistent VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 STATs STATs NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 Qp Qp NOUN NN Number=Sing _ _ _ _ 9 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 Qp Qp VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 12 using use VERB VBG VerbForm=Ger _ _ _ _ 13 Burkitt Burkitt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 's 's PART POS _ _ _ _ _ 15 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 16 Rael Rael PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 cultured culture VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 nasopharyngeal nasopharyngeal ADJ JJ Degree=Pos _ _ _ _ 21 carcinoma carcinoma NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 NPC NPC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ # sent_id = 4181 # text = STAT protein. 1 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 . . PUNCT . _ _ _ _ _ # sent_id = 4182 # text = We investigated whether the inability to maintain EBV-positive NPC cell lines in culture was related to Qp activity. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 inability inability NOUN NN Number=Sing _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 maintain maintain VERB VB VerbForm=Inf _ _ _ _ 8 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 positive positive ADJ JJ Degree=Pos _ _ _ _ 11 NPC Npc NOUN NN Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 lines line NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 culture culture NOUN NN Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 related related ADJ JJ Degree=Pos _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 Qp Qp VERB VB VerbForm=Inf _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4183 # text = Passaging of the NPC cell line HK666 led to activation of expression of BZLF1, which encodes Zta and loss of Qp function. 1 Passaging Passaging NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 NPC NPC PROPN NNP Number=Sing _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 line line NOUN NN Number=Sing _ _ _ _ 7 HK666 HK666 PROPN NNP Number=Sing _ _ _ _ 8 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 BZLF1 BZLF1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 Zta Zta PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 loss lose NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 Qp Qp NOUN NN Number=Sing _ _ _ _ 23 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4184 # text = Transient expression assays linked Zta expression to the down-regulation of Qp. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 assays assays NOUN NNS Number=Plur _ _ _ _ 4 linked link VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 Zta Zta PROPN NNP Number=Sing _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 down down NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 regulation regulation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Qp. Qp. PROPN NNP Number=Sing _ _ _ _ # sent_id = 4185 # text = Cotransfection of Zta reduced Qp activity in reporter assays. 1 Cotransfection Cotransfection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Zta Zta PROPN NNP Number=Sing _ _ _ _ 4 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 Qp Qp PROPN NNP Number=Sing _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 reporter reporter NOUN NN Number=Sing _ _ _ _ 9 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 4186 # text = This negative regulation required Zta DNA-binding activity. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 negative negative ADJ JJ Degree=Pos _ _ _ _ 3 regulation regulation NOUN NN Number=Sing _ _ _ _ 4 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 Zta Zta PROPN NNP Number=Sing _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 4187 # text = We provide evidence that Zta up-regulation of p53 leads to p53-mediated interference with JAK/STAT activation of Qp. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 evidence evidence NOUN NN Number=Sing _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 Zta Zta PROPN NNP Number=Sing _ _ _ _ 6 up up ADP IN _ _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 regulation regulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 p53 p53 NUM CD NumType=Card _ _ _ _ 11 leads lead NOUN NNS Number=Plur _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 p53 p53 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 -mediated -mediated ADJ JJ Degree=Pos _ _ _ _ 15 interference interference NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 JAK JAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 / / PUNCT , _ _ _ _ SpaceAfter=No 19 STAT Stat PROPN NNP Number=Sing _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 Qp Qp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4188 # text = The data imply that JAK/STAT signaling has a role in EBV-associated malignancies. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 imply imply ADV RB _ _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 JAK JAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 / / PUNCT , _ _ _ _ SpaceAfter=No 7 STAT Stat PROPN NNP Number=Sing _ _ _ _ 8 signaling signaling NOUN NN Number=Sing _ _ _ _ 9 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 associated associated ADJ JJ Degree=Pos _ _ _ _ 16 malignancies malignancy NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4189 # text = Document 003003706 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003706 003003706 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4190 # text = Lipopolysaccharide induces phosphorylation of MAD3 and activation of c-Rel and related NF-kappa B proteins in human monocytic THP-1 cells. 1 Lipopolysaccharide Lipopolysaccharide VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 induces induce NOUN NNS Number=Plur _ _ _ _ 3 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 MAD3 MAD3 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 Rel Rel NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 related relate ADJ JJ Degree=Pos _ _ _ _ 14 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 proteins protein NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 22 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4191 # text = Many effects of lipopolysaccharide (LPS) on gene expression, including that of human immunodeficiency virus (HIV), in monocytic cells are mediated by activation of kappa B DNA-binding proteins. 1 Many many ADJ JJ Degree=Pos _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 LPS LPS INTJ UH _ _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 including include VERB VBG VerbForm=Ger _ _ _ _ 13 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 17 virus virus NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 kappa kappa NOUN NN Number=Sing _ _ _ _ 31 B b NOUN NN Number=Sing _ _ _ _ 32 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 binding bind VERB VBG VerbForm=Ger _ _ _ _ 35 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 4192 # text = However, the specific members of the NF-kappa B/Rel transcription factor family involved in the LPS response, and the mechanisms through which LPS-generated signals are transduced remain unclear. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 members member NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 Rel Rel PROPN NNP Number=Sing _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 family family NOUN NN Number=Sing _ _ _ _ 17 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 LPS LPS PROPN NNP Number=Sing _ _ _ _ 21 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 26 through through ADP IN _ _ _ _ _ 27 which which PRON WDT PronType=Rel _ _ _ _ 28 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 signals signal NOUN NNS Number=Plur _ _ _ _ 32 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 transduced transduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 34 remain remain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 unclear unclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 4193 # text = Here we show that LPS induces nuclear expression of c-Rel/p50 heterodimers as well as p50/p65 (NF-kappa B) kappa B DNA-binding complexes in human monocytic THP-1 cells. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 LPS LPS PROPN NNP Number=Sing _ _ _ _ 6 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 c- c- SYM NFP _ _ _ _ SpaceAfter=No 11 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 p50 p50 NUM CD NumType=Card _ _ _ _ 14 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 15 as as ADV RB _ _ _ _ _ 16 well well ADV RB Degree=Pos _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 / / SYM SYM _ _ _ _ SpaceAfter=No 20 p65 p65 NUM CD NumType=Card _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ _ 29 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 binding binding VERB VBG VerbForm=Ger _ _ _ _ 32 complexes complex NOUN NNS Number=Plur _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 human human ADJ JJ Degree=Pos _ _ _ _ 35 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 36 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT , _ _ _ _ SpaceAfter=No 38 1 1 NUM CD NumType=Card _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 4194 # text = Nuclear localization of these proteins occurred concomitantly with a rapid decrease in their cytosolic levels and was independent of phorbol ester-sensitive protein kinase C. Within 24 h following LPS stimulation there was a striking increase in the levels of c-Rel, p105, and p50 in the cytosol. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 localization localization NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ _ 6 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 concomitantly concomitantly ADV RB _ _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 11 decrease decrease NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 15 levels level NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 independent independent ADJ JJ Degree=Pos _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 21 ester-sensitive ester-sensitive ADJ JJ Degree=Pos _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 kinase kinase NOUN NN Number=Sing _ _ _ _ 24 C c PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ 26 Within within ADP IN _ _ _ _ _ 27 24 24 NUM CD NumType=Card _ _ _ _ 28 h h NOUN NN Number=Sing _ _ _ _ 29 following follow VERB VBG VerbForm=Ger _ _ _ _ 30 LPS Lp ADJ JJ Degree=Pos _ _ _ _ 31 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 32 there there ADV RB PronType=Dem _ _ _ _ 33 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 striking striking VERB VBG VerbForm=Ger _ _ _ _ 36 increase increase NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 levels level NOUN NNS Number=Plur _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 p105 p105 NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 p50 p50 NUM CD NumType=Card _ _ _ _ 49 in in ADP IN _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 cytosol cytosol NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 4195 # text = The increased levels of these proteins correlated with increases in the amounts of their mRNAs during LPS activation of THP-1 cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 levels level NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 proteins protein NOUN NNS Number=Plur _ _ _ _ 7 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 increases increase NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 amounts amount NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 mRNAs mRNA NOUN NNS Number=Plur _ _ _ _ 16 during during ADP IN _ _ _ _ _ 17 LPS LPS PROPN NNP Number=Sing _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 THP THP NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4196 # text = LPS activation of THP-1 cells resulted in phosphorylation of MAD3 (an I kappa B-like protein), a rapid increase in MAD3 mRNA, and an increase in MAD3 protein by 2 h. 1 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 THP THP NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 MAD3 MAD3 NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 kappa kappa PROPN NNP Number=Sing _ _ _ _ 17 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 like like ADJ JJ Degree=Pos _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 25 increase increase NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 MAD3 MAD3 NUM CD NumType=Card _ _ _ _ 28 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 increase increase NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 MAD3 MAD3 NUM CD NumType=Card _ _ _ _ 35 protein protein NOUN NN Number=Sing _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 2 2 NUM CD NumType=Card _ _ _ _ 38 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 4197 # text = Thus, LPS activation of human monocytic cells results in nuclear expression of c-Rel/p50 and p50/p65 (NF-kappa B) and induces phosphorylation of MAD3. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 LPS LPS ADJ JJ Degree=Pos _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 results result NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 c- c- SYM NFP _ _ _ _ SpaceAfter=No 15 Rel/p50 Rel/p50 NUM CD NumType=Card _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 / / SYM SYM _ _ _ _ SpaceAfter=No 19 p65 p65 NUM CD NumType=Card _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa NOUN NN Number=Sing _ _ _ _ 24 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 induces induce NOUN NNS Number=Plur _ _ _ _ 28 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 MAD3 MAD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4198 # text = Document 003003707 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003707 003003707 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4199 # text = The role of NFATp in cyclosporin A-sensitive tumor necrosis factor-alpha gene transcription. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 7 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 10 tumor tumor NOUN NN Number=Sing _ _ _ _ 11 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 alpha alpha NOUN NN Number=Sing _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4200 # text = The tumor necrosis factor-alpha (TNF alpha) gene is an immediate early gene in activated T cells, in that it is rapidly induced without a requirement for protein synthesis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 tumor tumor NOUN NN Number=Sing _ _ _ _ 3 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 TNF Tnf NOUN NN Number=Sing _ _ _ _ 9 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 15 early early ADJ JJ Degree=Pos _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 in in SCONJ IN _ _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 rapidly rapidly ADV RB _ _ _ _ _ 27 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 without without ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 requirement requirement NOUN NN Number=Sing _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 protein protein NOUN NN Number=Sing _ _ _ _ 33 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4201 # text = Maximal induction of TNF alpha mRNA can be induced by treatment of T cells with calcium ionophores alone, via a calcineurin-dependent process that is blocked by cyclosporin A. 1 Maximal Maximal ADJ JJ Degree=Pos _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 TNF TNF PROPN NNP Number=Sing _ _ _ _ 5 alpha alpha PROPN NNP Number=Sing _ _ _ _ 6 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 7 can can AUX MD VerbForm=Fin _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 treatment treatment NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 calcium calcium NOUN NN Number=Sing _ _ _ _ 17 ionophores ionophore NOUN NNS Number=Plur _ _ _ _ 18 alone alone ADV RB _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 via via ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 25 process process NOUN NN Number=Sing _ _ _ _ 26 that that PRON WDT PronType=Rel _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 31 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4202 # text = We have previously identified a promoter element, kappa 3, that is required for calcium-stimulated, cyclosporin A-sensitive induction of the TNF alpha gene in activated T cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 promoter promoter NOUN NN Number=Sing _ _ _ _ 7 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 calcium- calcium- SYM NFP _ _ _ _ SpaceAfter=No 17 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 20 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 23 induction induction NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 TNF TNF PROPN NNP Number=Sing _ _ _ _ 27 alpha alpha NOUN NN Number=Sing _ _ _ _ 28 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 T T PROPN NNP Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4203 # text = Here, we demonstrate that the kappa 3 binding factor contains NFATp, a cyclosporin-sensitive DNA-binding protein required for interleukin-2 gene transcription. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 3 3 NUM CD NumType=Card _ _ _ _ 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 NFATp NFATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 cyclosporin- cyclosporin- SYM SYM _ _ _ _ SpaceAfter=No 16 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 17 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 binding binding VERB VBG VerbForm=Ger _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ _ 26 gene gene NOUN NN Number=Sing _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4204 # text = NFATp binds to two sites within the kappa 3 element, and occupancy of both sites is required for TNF alpha gene induction. 1 NFATp NFATp ADJ JJ Degree=Pos _ _ _ _ 2 binds bind NOUN NNS Number=Plur _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 sites site NOUN NNS Number=Plur _ _ _ _ 6 within within ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 3 3 NUM CD NumType=Card _ _ _ _ 10 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 occupancy occupancy NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 both both DET DT _ _ _ _ _ 16 sites site NOUN NNS Number=Plur _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 TNF TNF PROPN NNP Number=Sing _ _ _ _ 21 alpha alpha ADV RB _ _ _ _ _ 22 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4205 # text = Thus, although the kappa 3 element has little sequence similarity to other NFATp-binding sites, it appears to function as a cyclosporin-sensitive promoter element in T cells by virtue of its ability to bind NFATp. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 although although SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 3 3 NUM CD NumType=Card _ _ _ _ 7 element element NOUN NN Number=Sing _ _ _ _ 8 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 little little ADJ JJ Degree=Pos _ _ _ _ 10 sequence sequence NOUN NN Number=Sing _ _ _ _ 11 similarity similarity NOUN NN Number=Sing _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 other other ADJ JJ Degree=Pos _ _ _ _ 14 NFATp NFATp NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 binding binding NOUN NN Number=Sing _ _ _ _ 17 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 20 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 function function VERB VB VerbForm=Inf _ _ _ _ 23 as as ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 cyclosporin- cyclosporin- SYM SYM _ _ _ _ SpaceAfter=No 26 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ _ 28 element element NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 T t PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 virtue virtue NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 36 ability ability NOUN NN Number=Sing _ _ _ _ 37 to to PART TO _ _ _ _ _ 38 bind bind VERB VB VerbForm=Inf _ _ _ _ 39 NFATp NFATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 4206 # text = The involvement of NFATp in transcriptional activation of both the interleukin-2 and TNF alpha genes suggests that this factor plays an important role in the coordinate induction of multiple cytokine genes, starting at the earliest stages of T cell activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 involvement involvement NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 both both CCONJ CC _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 TNF TNF PROPN NNP Number=Sing _ _ _ _ 16 alpha alpha PROPN NNP Number=Sing _ _ _ _ 17 genes gene VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 important important ADJ JJ Degree=Pos _ _ _ _ 25 role role NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 coordinate coordinate ADJ JJ Degree=Pos _ _ _ _ 29 induction induction NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 32 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 33 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 starting start VERB VBG VerbForm=Ger _ _ _ _ 36 at at ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 earliest earliest ADJ JJS Degree=Sup _ _ _ _ 39 stages stage NOUN NNS Number=Plur _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 T t PROPN NNP Number=Sing _ _ _ _ 42 cell cell NOUN NN Number=Sing _ _ _ _ 43 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4207 # text = Document 003003710 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003710 003003710 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4208 # text = Comparison of retinoic acid and phorbol myristate acetate as inducers of monocytic differentiation. 1 Comparison Comparison NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 4 acid acid NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 7 myristate myristate NOUN NN Number=Sing _ _ _ _ 8 acetate acetate NOUN NN Number=Sing _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 inducers inducer NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 13 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4209 # text = Several human myeloid leukemia cell lines growing in vitro can be induced to differentiate to more mature monocyte/macrophage-like cells by treatment with protein kinase C-activating phorbol esters, such as PMA. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 4 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 lines line NOUN NNS Number=Plur _ _ _ _ 7 growing grow VERB VBG VerbForm=Ger _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 vitro vitro NOUN NN Number=Sing _ _ _ _ 10 can can AUX MD VerbForm=Fin _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 differentiate differentiate VERB VB VerbForm=Inf _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 more more ADJ JJR Degree=Cmp _ _ _ _ 17 mature mature ADJ JJ Degree=Pos _ _ _ _ 18 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 / / PUNCT , _ _ _ _ SpaceAfter=No 20 macrophage-like macrophage-like ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 treatment treatment NOUN NN Number=Sing _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ _ 26 kinase kinase NOUN NN Number=Sing _ _ _ _ 27 C- C- NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 activating activate VERB VBG VerbForm=Ger _ _ _ _ 29 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 30 esters ester NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 such such ADJ JJ Degree=Pos _ _ _ _ 33 as as ADP IN _ _ _ _ _ 34 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4210 # text = In addition to PMA, cells of the THP-1 myeloid leukemia cell line acquire macrophage-like characteristics after treatment with all-trans retinoic acid (RA). 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 13 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 line line NOUN NN Number=Sing _ _ _ _ 16 acquire acquire NOUN NN Number=Sing _ _ _ _ 17 macrophage macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 like like ADJ JJ Degree=Pos _ _ _ _ 20 characteristics characteristic NOUN NNS Number=Plur _ _ _ _ 21 after after ADP IN _ _ _ _ _ 22 treatment treatment NOUN NN Number=Sing _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 all all DET DT _ _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 trans tran NOUN NNS Number=Plur _ _ _ _ 27 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 28 acid acid NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4211 # text = To analyze the signal transduction mechanisms induced by RA, we first compared the effects of PMA and RA on the expression of genes which are known to be regulated during monocytic differentiation. 1 To to PART TO _ _ _ _ _ 2 analyze analyze VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 signal signal NOUN NN Number=Sing _ _ _ _ 5 transduction transduction NOUN NN Number=Sing _ _ _ _ 6 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 12 first first ADV RB _ _ _ _ _ 13 compared compare VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 effects effect NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 PMA PMA PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 RA RA PROPN NNP Number=Sing _ _ _ _ 20 on on ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 genes gene NOUN NNS Number=Plur _ _ _ _ 25 which which PRON WDT PronType=Rel _ _ _ _ 26 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 to to PART TO _ _ _ _ _ 29 be be AUX VB VerbForm=Inf _ _ _ _ 30 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 during during ADP IN _ _ _ _ _ 32 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 33 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4212 # text = Both RA and PMA effectively down-regulated c-myc expression, while c-myb expression decreased only after PMA treatment. 1 Both both CCONJ CC _ _ _ _ _ 2 RA RA PROPN NNP Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 PMA PMA PROPN NNP Number=Sing _ _ _ _ 5 effectively effectively ADV RB _ _ _ _ _ 6 down down ADV RB _ _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 c- c- SYM NFP _ _ _ _ SpaceAfter=No 10 myc myc NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 while while SCONJ IN _ _ _ _ _ 14 c- c- SYM NFP _ _ _ _ SpaceAfter=No 15 myb myb NOUN NN Number=Sing _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 only only ADV RB _ _ _ _ _ 19 after after ADP IN _ _ _ _ _ 20 PMA PMA PROPN NNP Number=Sing _ _ _ _ 21 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4213 # text = Expression of the beta 2-integrin genes, CD11a and CD11b, was clearly increased after both of these treatments. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 beta beta NOUN NN Number=Sing _ _ _ _ 5 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 integrin integrin NOUN NN Number=Sing _ _ _ _ 8 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 CD11 CD11 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 CD11 Cd11 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 b b NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 clearly clearly ADV RB _ _ _ _ _ 18 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 after after ADP IN _ _ _ _ _ 20 both both DET DT _ _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 23 treatments treatment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4214 # text = Their effects on the src-family tyrosine kinase genes were different: hck expression was similarly induced by these agents but lyn expression was stronger and more rapid after RA treatment. 1 Their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 on on ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 src- src- SYM NFP _ _ _ _ SpaceAfter=No 6 family family NOUN NN Number=Sing _ _ _ _ 7 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 8 kinase kinase NOUN NN Number=Sing _ _ _ _ 9 genes gene NOUN NNS Number=Plur _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 different different ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 : : PUNCT : _ _ _ _ _ 13 hck hck ADJ JJ Degree=Pos _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 similarly similarly ADV RB _ _ _ _ _ 17 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 20 agents agent NOUN NNS Number=Plur _ _ _ _ 21 but but CCONJ CC _ _ _ _ _ 22 lyn lyn NOUN NN Number=Sing _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 stronger stronger ADJ JJR Degree=Cmp _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 more more ADV RBR _ _ _ _ _ 28 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 29 after after ADP IN _ _ _ _ _ 30 RA Ra PROPN NNP Number=Sing _ _ _ _ 31 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4215 # text = RA also enhanced lyn mRNA production rapidly in HL-60, indicating that the activation of lyn gene expression is common in monocytic and granulocytic maturation of myeloid leukemia cells. 1 RA Ra PROPN NNP Number=Sing _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 enhanced enhance VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 lyn lyn ADJ JJ Degree=Pos _ _ _ _ 5 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 6 production production NOUN NN Number=Sing _ _ _ _ 7 rapidly rapidly ADV RB _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 60 60 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 lyn lyn ADJ JJ Degree=Pos _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 common common ADJ JJ Degree=Pos _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 27 maturation maturation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 30 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4216 # text = To examine whether the AP-1 enhancer activity is involved in RA-induced monocytic differentiation, THP-1 cells were transiently transfected with a chloramphenicol acetyl transferase (CAT)-reporter gene containing 5 copies of the AP-1 binding sites. 1 To to PART TO _ _ _ _ _ 2 examine examine VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 involved involved ADJ JJ Degree=Pos _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 17 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 transiently transiently ADV RB _ _ _ _ _ 25 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 29 acetyl acetyl NOUN NN Number=Sing _ _ _ _ 30 transferase transferase NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 CAT Cat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 reporter reporter NOUN NN Number=Sing _ _ _ _ 36 gene gene NOUN NN Number=Sing _ _ _ _ 37 containing contain VERB VBG VerbForm=Ger _ _ _ _ 38 5 5 NUM CD NumType=Card _ _ _ _ 39 copies copy NOUN NNS Number=Plur _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT , _ _ _ _ SpaceAfter=No 44 1 1 NUM CD NumType=Card _ _ _ _ 45 binding binding VERB VBG VerbForm=Ger _ _ _ _ 46 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 4217 # text = In contrast to PMA, RA did not induce any CAT activity in these cells, thus suggesting that the RA-induced changes in the expression of those genes described above were not dependent on the AP-1 enhancer activity. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 RA RA PROPN NNP Number=Sing _ _ _ _ 7 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 induce induce VERB VB VerbForm=Inf _ _ _ _ 10 any any DET DT _ _ _ _ _ 11 CAT cat ADJ JJ Degree=Pos _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 thus thus ADV RB _ _ _ _ _ 18 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 changes change NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 those those DET DT Number=Plur|PronType=Dem _ _ _ _ 30 genes gene NOUN NNS Number=Plur _ _ _ _ 31 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 above above ADV RB _ _ _ _ _ 33 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 not not PART RB _ _ _ _ _ 35 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 36 on on ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 1 1 NUM CD NumType=Card _ _ _ _ 41 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 42 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4218 # text = Document 003003718 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003718 003003718 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4219 # text = Modulation of E2F complexes during G0 to S phase transition in human primary B-lymphocytes. 1 Modulation Modulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 E2 E2 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 F F PROPN NNP Number=Sing _ _ _ _ 5 complexes complexe NOUN NNS Number=Plur _ _ _ _ 6 during during ADP IN _ _ _ _ _ 7 G0 G0 PROPN NNP Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 S S PROPN NNP Number=Sing _ _ _ _ 10 phase phase NOUN NN Number=Sing _ _ _ _ 11 transition transition NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 primary primary ADJ JJ Degree=Pos _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4220 # text = The pocket protein-E2F complexes are convergence points for cell cycle signaling. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 pocket pocket NOUN NN Number=Sing _ _ _ _ 3 protein- protein- PUNCT , _ _ _ _ SpaceAfter=No 4 E2 E2 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 F f NOUN NN Number=Sing _ _ _ _ 6 complexes complex NOUN NNS Number=Plur _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 convergence convergence NOUN NN Number=Sing _ _ _ _ 9 points point NOUN NNS Number=Plur _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 cycle cycle NOUN NN Number=Sing _ _ _ _ 13 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 4221 # text = In the present report, we identified and monitored the pocket protein-E2F complexes in human primary B-lymphocytes after activation by phorbol 12-myristate 13-acetate. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 monitored monitor VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 pocket pocket NOUN NN Number=Sing _ _ _ _ 12 protein- protein- PUNCT , _ _ _ _ SpaceAfter=No 13 E2 E2 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 F f PROPN NNP Number=Sing _ _ _ _ 15 complexes complex NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 primary primary ADJ JJ Degree=Pos _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 22 after after ADP IN _ _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 26 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - PUNCT : _ _ _ _ SpaceAfter=No 28 myristate myristate NOUN NN Number=Sing _ _ _ _ 29 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 - - PUNCT : _ _ _ _ SpaceAfter=No 31 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4222 # text = Consistent with previous data from human and mouse fibroblasts and T-lymphocytes, E2F4 and DP1 form the predominant E2F heterodimers both in G0 and G1 phases of the human B-lymphocyte cell cycle, whereas E2F1 and -3 are first detected in late G1, and their expression levels increase towards S phase. 1 Consistent consistent ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 previous previous ADJ JJ Degree=Pos _ _ _ _ 4 data data NOUN NN Number=Sing _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 human human NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 mouse mouse NOUN NN Number=Sing _ _ _ _ 9 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 E2F4 E2F4 PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 DP1 DP1 PROPN NNP Number=Sing _ _ _ _ 17 form form VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 predominant predominant ADJ JJ Degree=Pos _ _ _ _ 20 E2F E2f NOUN NN Number=Sing _ _ _ _ 21 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 22 both both CCONJ CC _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 G0 G0 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 G1 G1 NUM CD NumType=Card _ _ _ _ 27 phases phasis NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 whereas whereas SCONJ IN _ _ _ _ _ 38 E2F1 E2F1 PROPN NNP Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 - - SYM SYM _ _ _ _ SpaceAfter=No 41 3 3 NUM CD NumType=Card _ _ _ _ 42 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 43 first first ADV RB _ _ _ _ _ 44 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 late late ADJ JJ Degree=Pos _ _ _ _ 47 G1 G1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 51 expression expression NOUN NN Number=Sing _ _ _ _ 52 levels level NOUN NNS Number=Plur _ _ _ _ 53 increase increase VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 54 towards toward ADP IN _ _ _ _ _ 55 S 's NOUN NN Number=Sing _ _ _ _ 56 phase phase NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 4223 # text = Intriguingly, the major E2F complex that we detected in quiescent human B-lymphocytes is consisted of pRB, E2F4, and DP1. 1 Intriguingly Intriguingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 major major ADJ JJ Degree=Pos _ _ _ _ 5 E2 e2 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 F f PROPN NNP Number=Sing _ _ _ _ 7 complex complex NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 10 detected detect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 quiescent quiescent ADJ JJ Degree=Pos _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 consisted consist VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 pRB pRB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 E2F4 E2F4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 DP1 DP1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4224 # text = Though the levels of DP1 and -2 increase when cells progress from G0 to S, the proportion of DP1 to DP2 remains relatively constant during the cell cycle. 1 Though though SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 levels level NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 DP1 DP1 PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 increase increase NOUN NN Number=Sing _ _ _ _ 10 when when ADV WRB PronType=Int _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 progress progress VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 G0 G0 PROPN NNP Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 S s PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 proportion proportion NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 DP1 DP1 NUM CD NumType=Card _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 DP2 DP2 NUM CD NumType=Card _ _ _ _ 24 remains remains NOUN NNS Number=Plur _ _ _ _ 25 relatively relatively ADV RB _ _ _ _ _ 26 constant constant ADJ JJ Degree=Pos _ _ _ _ 27 during during ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4225 # text = We also observed an increase in electrophoretic mobility of the predominant E2F components, DP1 and E2F4, as B-lymphocytes progressed from G0 into early G1. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 increase increase NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 8 mobility mobility NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 predominant predominant ADJ JJ Degree=Pos _ _ _ _ 12 E2F E2f NOUN NN Number=Sing _ _ _ _ 13 components component NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 DP1 DP1 PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 E2F4 E2F4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 as as SCONJ IN _ _ _ _ _ 20 B b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 23 progressed progress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 G0 G0 PROPN NNP Number=Sing _ _ _ _ 26 into into ADP IN _ _ _ _ _ 27 early early ADJ JJ Degree=Pos _ _ _ _ 28 G1 G1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4226 # text = This increase in mobility was attributable to dephosphorylation, as lambda phosphatase treatment could convert the slower migrating forms into the corresponding faster mobility forms. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 increase increase NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 mobility mobility NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 attributable attributable ADJ JJ Degree=Pos _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 dephosphorylation dephosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 as as SCONJ IN _ _ _ _ _ 11 lambda lambda NOUN NN Number=Sing _ _ _ _ 12 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 13 treatment treatment NOUN NN Number=Sing _ _ _ _ 14 could could AUX MD VerbForm=Fin _ _ _ _ 15 convert convert VERB VB VerbForm=Inf _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 slower slower NOUN NN Number=Sing _ _ _ _ 18 migrating migrat VERB VBG VerbForm=Ger _ _ _ _ 19 forms form NOUN NNS Number=Plur _ _ _ _ 20 into into ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 corresponding corresponding NOUN NN Number=Sing _ _ _ _ 23 faster faster NOUN NN Number=Sing _ _ _ _ 24 mobility mobility NOUN NN Number=Sing _ _ _ _ 25 forms form NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4227 # text = We further demonstrated that this change in phosphorylation status correlates with a decrease in DNA binding activity. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 change change NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 9 status status NOUN NN Number=Sing _ _ _ _ 10 correlates correlate NOUN NNS Number=Plur _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 decrease decrease NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 DNA dna NOUN NN Number=Sing _ _ _ _ 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4228 # text = This modulation of DNA binding activity mediated through the dephosphorylation of DP1 and E2F4 could help to explain the lack of in vivo DNA footprinting in late G1 and S phases of gene promoters negatively regulated through E2F sites and suggests a novel mechanism for controlling E2F transcriptional activity during the transition from quiescence to proliferation. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 modulation modulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ _ 5 binding binde VERB VBG VerbForm=Ger _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 through through ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 dephosphorylation dephosphorylation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 DP1 DP1 PROPN NNP Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 E2F4 E2F4 PROPN NNP Number=Sing _ _ _ _ 15 could could AUX MD VerbForm=Fin _ _ _ _ 16 help help VERB VB VerbForm=Inf _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 explain explain VERB VB VerbForm=Inf _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 lack lack NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 vivo vivo NOUN NN Number=Sing _ _ _ _ 24 DNA dna NOUN NN Number=Sing _ _ _ _ 25 footprinting footprinting VERB VBG VerbForm=Ger _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 late late ADJ JJ Degree=Pos _ _ _ _ 28 G1 g1 NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 S s NOUN NN Number=Sing _ _ _ _ 31 phases phasis NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ _ 34 promoters promoter NOUN NNS Number=Plur _ _ _ _ 35 negatively negatively ADV RB _ _ _ _ _ 36 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 through through ADP IN _ _ _ _ _ 38 E2 E2 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 F F PROPN NNP Number=Sing _ _ _ _ 40 sites site NOUN NNS Number=Plur _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 43 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 44 novel novel NOUN NN Number=Sing _ _ _ _ 45 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 46 for for SCONJ IN _ _ _ _ _ 47 controlling control VERB VBG VerbForm=Ger _ _ _ _ 48 E2F E2F ADP RP _ _ _ _ _ 49 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 50 activity activity NOUN NN Number=Sing _ _ _ _ 51 during during ADP IN _ _ _ _ _ 52 the the DET DT Definite=Def|PronType=Art _ _ _ _ 53 transition transition NOUN NN Number=Sing _ _ _ _ 54 from from ADP IN _ _ _ _ _ 55 quiescence quiescence NOUN NN Number=Sing _ _ _ _ 56 to to ADP IN _ _ _ _ _ 57 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4229 # text = Document 003003719 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003719 003003719 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4230 # text = SCL and related hemopoietic helix-loop-helix transcription factors. 1 SCL Scl ADJ JJ Degree=Pos _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 related related ADJ JJ Degree=Pos _ _ _ _ 4 hemopoietic hemopoietic ADJ JJ Degree=Pos _ _ _ _ 5 helix helix NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 -loop -loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 helix helix NOUN NN Number=Sing _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4231 # text = The helix-loop-helix (HLH) proteins are a family of transcription factors that include proteins critical to differentiation and development in species ranging from plants to mammals. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 helix-loop helix-loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 helix helix NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 HLH HLH NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 proteins protein NOUN NNS Number=Plur _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 family family NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factors factor NOUN NNS Number=Plur _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 include include VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 proteins protein NOUN NNS Number=Plur _ _ _ _ 18 critical critical ADJ JJ Degree=Pos _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 development development NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 species species NOUN NNS Number=Plur _ _ _ _ 25 ranging range VERB VBG VerbForm=Ger _ _ _ _ 26 from from ADP IN _ _ _ _ _ 27 plants plant NOUN NNS Number=Plur _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 mammals mammal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4232 # text = Five members of this family (MYC, SCL, TAL-2, LYL-1 and E2A) are implicated in oncogenic events in human lymphoid tumors because of their consistent involvement in chromosomal translocations. 1 Five five NUM CD NumType=Card _ _ _ _ 2 members member NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 family family NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 MYC MYC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 SCL SCL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 TAL TAL NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 LYL LYL NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 E2A E2a NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 oncogenic oncogenic ADJ JJ Degree=Pos _ _ _ _ 25 events event NOUN NNS Number=Plur _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 human human ADJ JJ Degree=Pos _ _ _ _ 28 lymphoid lymphoid NOUN NN Number=Sing _ _ _ _ 29 tumors tumor NOUN NNS Number=Plur _ _ _ _ 30 because because ADP IN _ _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 33 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 34 involvement involvement NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 chromosomal chromosomal ADJ JJ Degree=Pos _ _ _ _ 37 translocations translocation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 4233 # text = Although activated in T cell leukemias, expression of SCL and LYL-1 is low or undetectable in normal T cell populations. 1 Although although SCONJ IN _ _ _ _ _ 2 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 leukemias leukemia NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 SCL SCL PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 LYL LYL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 low low ADJ JJ Degree=Pos _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 undetectable undetectable ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 normal normal ADJ JJ Degree=Pos _ _ _ _ 21 T T PROPN NNP Number=Sing _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 populations population NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4234 # text = SCL is expressed in erythroid, megakaryocyte and mast cell populations (the same cell lineages as GATA-1, a zinc-finger transcription factor). 1 SCL SCL PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 megakaryocyte megakaryocyte ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 mast mast ADJ JJ Degree=Pos _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 populations population NOUN NNS Number=Plur _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 same same ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 lineages lineage NOUN NNS Number=Plur _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 zinc zinc NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 finger finger NOUN NN Number=Sing _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4235 # text = In addition, both SCL and GATA-1 undergo coordinate modulation during chemically induced erythroid differentiation of mouse erythroleukemia cells and are down-modulated during myeloid differentiation of human K562 cells, thus implying a role for SCL in erythroid differentiation events. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 both both CCONJ CC _ _ _ _ _ 5 SCL SCL PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 undergo undergo NOUN NN Number=Sing _ _ _ _ 11 coordinate coordinate NOUN NN Number=Sing _ _ _ _ 12 modulation modulation NOUN NN Number=Sing _ _ _ _ 13 during during ADP IN _ _ _ _ _ 14 chemically chemically ADV RB _ _ _ _ _ 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 17 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 mouse mouse NOUN NN Number=Sing _ _ _ _ 20 erythroleukemia erythroleukemia NOUN NN Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 down down ADV RB _ _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 modulated modulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 during during ADP IN _ _ _ _ _ 28 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 29 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 human human ADJ JJ Degree=Pos _ _ _ _ 32 K562 K562 NOUN NN Number=Sing _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 thus thus ADV RB _ _ _ _ _ 36 implying imply VERB VBG VerbForm=Ger _ _ _ _ 37 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 role role NOUN NN Number=Sing _ _ _ _ 39 for for ADP IN _ _ _ _ _ 40 SCL SCL PROPN NNP Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 43 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 44 events event NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 4236 # text = However, in contrast to GATA-1, SCL is expressed in the developing brain. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 contrast contrast NOUN NN Number=Sing _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 SCL SCL PROPN NNP Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 developing develop VERB VBG VerbForm=Ger _ _ _ _ 16 brain brain NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4237 # text = Studies of the function of SCL suggest it is also important in proliferation and self-renewal events in erythroid cells. 1 Studies study NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 function function NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 SCL SCL PROPN NNP Number=Sing _ _ _ _ 7 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 also also ADV RB _ _ _ _ _ 11 important important ADJ JJ Degree=Pos _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 self self NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 renewal renewal NOUN NN Number=Sing _ _ _ _ 18 events event NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4238 # text = Document 003003722 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003722 003003722 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4239 # text = Tumor necrosis factor-alpha mRNA accumulation in human myelomonocytic cell lines. 1 Tumor tumor ADP IN _ _ _ _ _ 2 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 -alpha -alpha NOUN NN Number=Sing _ _ _ _ 5 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 6 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 myelomonocytic myelomonocytic ADJ JJ Degree=Pos _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 4240 # text = Role of transcriptional regulation by DNA sequence motifs and mRNA stabilization. 1 Role role NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ _ 7 sequence sequence NOUN NN Number=Sing _ _ _ _ 8 motifs motif NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 11 stabilization stabilization NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4241 # text = The cytokine TNF mediates many of the pathologic signs of cachexia, inflammation, and sepsis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 3 TNF TNF PRON PRP Case=Acc|Number=Sing|Person=1|PronType=Prs|Reflex=Yes _ _ _ _ 4 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 many many ADJ JJ Degree=Pos _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 pathologic pathologic NOUN NN Number=Sing _ _ _ _ 9 signs sign NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 cachexia cachexia NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 sepsis sepsis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4242 # text = The current work describes the regulation of TNF in human myelomonocytic cell lines after PMA stimulation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 current current ADJ JJ Degree=Pos _ _ _ _ 3 work work NOUN NN Number=Sing _ _ _ _ 4 describes describe VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 regulation regulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 TNF Tnf PROPN NNP Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 myelomonocytic myelomonocytic ADJ JJ Degree=Pos _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 lines line NOUN NNS Number=Plur _ _ _ _ 14 after after ADP IN _ _ _ _ _ 15 PMA PMA PROPN NNP Number=Sing _ _ _ _ 16 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4243 # text = The cell lines exhibit a low level of constitutive TNF mRNA expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 lines line NOUN NNS Number=Plur _ _ _ _ 4 exhibit exhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 low low ADJ JJ Degree=Pos _ _ _ _ 7 level level NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 10 TNF TNF PROPN NNP Number=Sing _ _ _ _ 11 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 4244 # text = Within 2 to 4 h of PMA exposure, steady state levels of TNF mRNA are markedly elevated in all myelomonocytic cell lines studied. 1 Within within ADP IN _ _ _ _ _ 2 2 2 NUM CD NumType=Card _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 4 4 NUM CD NumType=Card _ _ _ _ 5 h h NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 PMA PMA PROPN NNP Number=Sing _ _ _ _ 8 exposure exposure NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 steady steady ADJ JJ Degree=Pos _ _ _ _ 11 state state NOUN NN Number=Sing _ _ _ _ 12 levels level NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 TNF TNF PROPN NNP Number=Sing _ _ _ _ 15 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 markedly markedly ADV RB _ _ _ _ _ 18 elevated elevate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 all all DET DT _ _ _ _ _ 21 myelomonocytic myelomonocytic ADJ JJ Degree=Pos _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 lines line NOUN NNS Number=Plur _ _ _ _ 24 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4245 # text = This rise is due to increased mRNA stability, which increased by almost twofold, and to an overall increase in transcription, which rises by more than sixfold. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 rise rise NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 due due ADP IN _ _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 8 stability stability NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 which which PRON WDT PronType=Rel _ _ _ _ 11 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 almost almost ADV RB _ _ _ _ _ 14 twofold twofold ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 overall overall ADJ JJ Degree=Pos _ _ _ _ 20 increase increase NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 rises rise VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 more more ADJ JJR Degree=Cmp _ _ _ _ 28 than than ADP IN _ _ _ _ _ 29 sixfold sixfold NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4246 # text = At the level of the genomic TNF gene, a DNase I hypersensitive site is detected within the TNF promoter between -200 to -100 bp relative to the transcription initiation site. 1 At at ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 level level NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 7 TNF Tnf NOUN NN Number=Sing _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 DNase DNase NOUN NN Number=Sing _ _ _ _ 12 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 13 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 within within ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 TNF TNF PROPN NNP Number=Sing _ _ _ _ 20 promoter promoter NOUN NN Number=Sing _ _ _ _ 21 between between ADP IN _ _ _ _ _ 22 -200 -200 NUM CD NumType=Card _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 - - SYM SYM _ _ _ _ SpaceAfter=No 25 100 100 NUM CD NumType=Card _ _ _ _ 26 bp bp NOUN NN Number=Sing _ _ _ _ 27 relative relative ADV RB _ _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ _ 31 initiation initiation NOUN NN Number=Sing _ _ _ _ 32 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4247 # text = Although absent in nonexpressing erythroleukemia cell lines, the DNase I site is present in uninduced myelomonocytic cell lines and is not changed after PMA induction. 1 Although although SCONJ IN _ _ _ _ _ 2 absent absent VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 nonexpressing nonexpresse ADJ JJ Degree=Pos _ _ _ _ 5 erythroleukemia erythroleukemia NOUN NN Number=Sing _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 DNase DNase NOUN NN Number=Sing _ _ _ _ 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 present present ADJ JJ Degree=Pos _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 uninduced uninduced ADJ JJ Degree=Pos _ _ _ _ 17 myelomonocytic myelomonocytic ADJ JJ Degree=Pos _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 lines line NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 changed change VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 after after ADP IN _ _ _ _ _ 25 PMA Pma DET DT Definite=Ind|PronType=Art _ _ _ _ 26 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4248 # text = The PMA induction of c-fos mRNA correlated well with TNF gene induction; expression of genes encoding other proteins in the AP-1 complex (junB and junD) were also induced by PMA. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 PMA PMA PROPN NNP Number=Sing _ _ _ _ 3 induction induction NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 fos fo NOUN NNS Number=Plur _ _ _ _ 8 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 9 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 well well ADV RB Degree=Pos _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 TNF TNF PROPN NNP Number=Sing _ _ _ _ 13 gene gene PROPN NNP Number=Sing _ _ _ _ 14 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ; ; PUNCT , _ _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 genes gene NOUN NNS Number=Plur _ _ _ _ 19 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 20 other other ADJ JJ Degree=Pos _ _ _ _ 21 proteins protein NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 complex complex NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 junB junb NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 junD jund NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 also also ADV RB _ _ _ _ _ 35 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 4249 # text = The nuclear extracts from resting and induced ML-1 cells contain proteins binding specifically to the AP-1, AP-2, and NF kappa B sequence located within the TNF promoter. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 extracts extract NOUN NNS Number=Plur _ _ _ _ 4 from from SCONJ IN _ _ _ _ _ 5 resting resting VERB VBG VerbForm=Ger _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 ML ML NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 proteins protein NOUN NNS Number=Plur _ _ _ _ 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 specifically specifically ADV RB _ _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ _ 28 kappa kappa PROPN NNP Number=Sing _ _ _ _ 29 B b PROPN NNP Number=Sing _ _ _ _ 30 sequence sequence NOUN NN Number=Sing _ _ _ _ 31 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 within within ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 TNF TNF PROPN NNP Number=Sing _ _ _ _ 35 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 4250 # text = PMA induction increases the level of a number of specific binding complexes relative to the resting cells. 1 PMA PMA DET DT Definite=Ind|PronType=Art _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 level level NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 number number NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 specific specific ADJ JJ Degree=Pos _ _ _ _ 11 binding binding NOUN NN Number=Sing _ _ _ _ 12 complexes complex NOUN NNS Number=Plur _ _ _ _ 13 relative relative ADV RB _ _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 resting resting ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4251 # text = The regulatory mechanisms of the human and murine TNF genes are discussed. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 3 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 murine murine ADJ JJ Degree=Pos _ _ _ _ 9 TNF Tnf NOUN NN Number=Sing _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 discussed discuss VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4252 # text = Document 003003724 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003724 003003724 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4253 # text = Binding of c-Rel to STAT5 target sequences in HTLV-I-transformed T cells. 1 Binding binding NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 Rel Rel NOUN NN Number=Sing _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 STAT5 STAT5 NUM CD NumType=Card _ _ _ _ 8 target target NOUN NN Number=Sing _ _ _ _ 9 sequences sequence NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4254 # text = The type I human T-cell leukemia virus (HTLV-I) induces abnormal growth and subsequent transformation of T cells, which is associated with the development of an acute T-cell malignancy termed adult T-cell leukemia. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 type type NOUN NN Number=Sing _ _ _ _ 3 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 4 human human VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 T- T- SYM NFP _ _ _ _ SpaceAfter=No 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 8 virus virus NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 HTLV HTLV NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 abnormal abnormal ADJ JJ Degree=Pos _ _ _ _ 16 growth growth NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 19 transformation transformation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 development development NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 acute acute ADJ JJ Degree=Pos _ _ _ _ 33 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 malignancy malignancy NOUN NN Number=Sing _ _ _ _ 36 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 adult adult NOUN NN Number=Sing _ _ _ _ 38 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 4255 # text = A characteristic of HTLV-I-transformed 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 characteristic characteristic NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ # sent_id = 4256 # text = T cells is the constitutive nuclear expression of NF-kappaB/Rel family of transcription factors, which appears to be essential for the growth of these transformed cells. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 13 Rel Rel PROPN NNP Number=Sing _ _ _ _ 14 family family NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 essential essential ADJ JJ Degree=Pos _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 growth growth NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 29 transformed transformed VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4257 # text = Although NF-kappaB/Rel factors are known to induce the expression of T-cell growth factor interleukin (IL)-2, it is unclear how they participate in the IL-2-independent growth of HTLV-I-transformed cells. 1 Although although SCONJ IN _ _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 Rel Rel NOUN NN Number=Sing _ _ _ _ 7 factors factor NOUN NNS Number=Plur _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 induce induce VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 growth growth NOUN NN Number=Sing _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 - - SYM SYM _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 unclear unclear ADJ JJ Degree=Pos _ _ _ _ 29 how how ADV WRB PronType=Int _ _ _ _ 30 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 31 participate participate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 independent independent ADJ JJ Degree=Pos _ _ _ _ 39 growth growth NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 4258 # text = In this study, we show that certain NF-kappaB/Rel members, predominantly c-Rel, interact with enhancer sequences for STAT5, a key transcription factor mediating IL-2-induced T-cell proliferation. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 certain certain ADJ JJ Degree=Pos _ _ _ _ 9 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 13 Rel Rel NOUN NN Number=Sing _ _ _ _ 14 members member NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 predominantly predominantly ADV RB _ _ _ _ _ 17 c- c- SYM NFP _ _ _ _ SpaceAfter=No 18 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 interact interact NOUN NN Number=Sing _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 23 sequences sequence NOUN NNS Number=Plur _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 STAT5 STAT5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 key key ADJ JJ Degree=Pos _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ _ 31 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 32 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 4259 # text = Reporter gene assays reveal that the binding of c-Rel to the STAT5 site present in the Fc gammaR1 gene leads to potent transactivation of this enhancer. 1 Reporter reporter NOUN NN Number=Sing _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 assays assays VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 reveal reveal ADJ JJ Degree=Pos _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 binding binding NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 Rel Rel NOUN NN Number=Sing _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 STAT5 STAT5 PROPN NNP Number=Sing _ _ _ _ 15 site site NOUN NN Number=Sing _ _ _ _ 16 present present VERB VB VerbForm=Inf _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 Fc Fc ADJ JJ Degree=Pos _ _ _ _ 20 gammaR1 gammar1 NOUN NN Number=Sing _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 potent potent VERB VB VerbForm=Inf _ _ _ _ 25 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4260 # text = Binding of c-Rel to the Fc gammaR1 1 Binding binding NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 Rel Rel NOUN NN Number=Sing _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 Fc Fc PROPN NNP Number=Sing _ _ _ _ 9 gammaR1 gammaR1 PROPN NNP Number=Sing _ _ _ _ # sent_id = 4261 # text = STAT site also occurs in human peripheral blood T cells immortalized with HTLV-I in vitro and is correlated with enhanced levels of proliferation of these cells. 1 STAT Stat NOUN NN Number=Sing _ _ _ _ 2 site site NOUN NN Number=Sing _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 occurs occur VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 8 blood blood NOUN NN Number=Sing _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 immortalized immortalize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 vitro vitro NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 correlated correlate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 levels level NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4262 # text = These results raise the possibility that NF-kappaB/Rel may participate in the growth control of HTLV-I-transformed T cells by regulating genes driven by both kappaB and certain 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 raise raise VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 possibility possibility NOUN NN Number=Sing _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 11 Rel Rel PROPN NNP Number=Sing _ _ _ _ 12 may may AUX MD VerbForm=Fin _ _ _ _ 13 participate participate VERB VB VerbForm=Inf _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 growth growth NOUN NN Number=Sing _ _ _ _ 17 control control NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 by by SCONJ IN _ _ _ _ _ 27 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 28 genes gene NOUN NNS Number=Plur _ _ _ _ 29 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 both both CCONJ CC _ _ _ _ _ 32 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 certain certain ADJ JJ Degree=Pos _ _ _ _ # sent_id = 4263 # text = STAT enhancers. 1 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 2 enhancers enhancer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4264 # text = Document 003003727 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003727 003003727 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4265 # text = Erythropoietin stimulates transcription of the TAL1/SCL gene and phosphorylation of its protein products. 1 Erythropoietin Erythropoietin PROPN NNP Number=Sing _ _ _ _ 2 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 TAL1/ Tal1/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 SCL Scl NOUN NN Number=Sing _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 products product NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4266 # text = Activation of the TAL1 (or SCL) gene, originally identified through its involvement by a recurrent chromosomal translocation, is the most frequent molecular lesion recognized in T-cell acute lymphoblastic leukemia. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 TAL1 tAL1 NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 or or CCONJ CC _ _ _ _ _ 7 SCL SCL NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 originally originally ADV RB _ _ _ _ _ 12 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 through through ADP IN _ _ _ _ _ 14 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 involvement involvement NOUN NN Number=Sing _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 recurrent recurrent ADJ JJ Degree=Pos _ _ _ _ 19 chromosomal chromosomal NOUN NN Number=Sing _ _ _ _ 20 translocation translocation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 most most ADV RBS _ _ _ _ _ 25 frequent frequent ADJ JJ Degree=Pos _ _ _ _ 26 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 27 lesion lesion NOUN NN Number=Sing _ _ _ _ 28 recognized recognize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 acute acute NOUN NN Number=Sing _ _ _ _ 33 lymphoblastic lymphoblastic ADJ JJ Degree=Pos _ _ _ _ 34 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4267 # text = The protein products of this gene contain the basic-helix-loop-helix motif characteristic of a large family of transcription factors that bind to the canonical DNA sequence CANNTG as protein heterodimers. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 products product NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 contain contain VERB VB VerbForm=Inf _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 basic-helix-loop basic-helix-loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 -helix -helix NOUN NN Number=Sing _ _ _ _ 11 motif motif NOUN NN Number=Sing _ _ _ _ 12 characteristic characteristic NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 large large ADJ JJ Degree=Pos _ _ _ _ 16 family family NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factors factor NOUN NNS Number=Plur _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 canonical canonical ADJ JJ Degree=Pos _ _ _ _ 25 DNA dna NOUN NN Number=Sing _ _ _ _ 26 sequence sequence NOUN NN Number=Sing _ _ _ _ 27 CANNTG Canntg NOUN NN Number=Sing _ _ _ _ 28 as as ADP IN _ _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ _ 30 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4268 # text = TAL1 expression by erythroid cells in vivo and in chemical-induced erythroleukemia cell lines in vivo suggested the gene might regulate aspects of erythroid differentiation. 1 TAL1 TAL1 NUM CD NumType=Card _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 vivo vivo NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 chemical chemical ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 erythroleukemia erythroleukemia NOUN NN Number=Sing _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 lines line NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 vivo vivo PROPN NNP Number=Sing _ _ _ _ 18 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 might might AUX MD VerbForm=Fin _ _ _ _ 22 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 23 aspects aspect NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 26 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4269 # text = Since the terminal events of erythropoiesis are controlled by the glycoprotein hormone erythropoietin (Epo), we investigated whether the expression or activity of the TAL1 gene and its protein products were affected by Epo in splenic erythroblasts from mice infected with an anemia-inducing strain of Friend virus (FVA cells). 1 Since since SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 4 events event NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 erythropoiesis erythropoiesis PRON DT Number=Sing|PronType=Dem _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 controlled controll VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 glycoprotein glycoprotein NOUN NN Number=Sing _ _ _ _ 12 hormone hormone NOUN NN Number=Sing _ _ _ _ 13 erythropoietin erythropoietin NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 Epo Epo PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 19 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 whether whether SCONJ IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 TAL1 tAL1 NOUN NN Number=Sing _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 31 protein protein NOUN NN Number=Sing _ _ _ _ 32 products product NOUN NNS Number=Plur _ _ _ _ 33 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 Epo Epo PROPN NNP Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 splenic splenic ADJ JJ Degree=Pos _ _ _ _ 39 erythroblasts erythroblast NOUN NNS Number=Plur _ _ _ _ 40 from from ADP IN _ _ _ _ _ 41 mice mouse NOUN NNS Number=Plur _ _ _ _ 42 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 with with ADP IN _ _ _ _ _ 44 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 45 anemia anemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 48 strain strain NOUN NN Number=Sing _ _ _ _ 49 of of ADP IN _ _ _ _ _ 50 Friend Friend NOUN NN Number=Sing _ _ _ _ 51 virus virus NOUN NN Number=Sing _ _ _ _ 52 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 53 FVA FVa ADJ JJ Degree=Pos _ _ _ _ 54 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 55 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 4270 # text = Epo elicited a rapid, dose-related increase in TAL1 mRNA by increasing transcription of the gene and stabilizing one of its mRNAs. 1 Epo Epo PROPN NNP Number=Sing _ _ _ _ 2 elicited elicit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 rapid rapid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 related related ADJ JJ Degree=Pos _ _ _ _ 9 increase increase NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 TAL1 TAL1 PROPN NNP Number=Sing _ _ _ _ 12 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 13 by by SCONJ IN _ _ _ _ _ 14 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 stabilizing stabilize VERB VBG VerbForm=Ger _ _ _ _ 21 one one NUM CD NumType=Card _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 mRNAs mRNAs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4271 # text = An Epo-inducible TAL1 DNA binding activity was identified in FVA cell nuclear extracts that subsequently decayed despite accumulating mRNA and protein. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 Epo-inducible Epo-inducible ADJ JJ Degree=Pos _ _ _ _ 3 TAL1 tAL1 NOUN NN Number=Sing _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ _ 5 binding binding VERB VBG VerbForm=Ger _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 FVA FVA PROPN NNP Number=Sing _ _ _ _ 11 cell cell VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 extracts extract NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 subsequently subsequently ADV RB _ _ _ _ _ 16 decayed decay VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 despite despite SCONJ IN _ _ _ _ _ 18 accumulating accumulat VERB VBG VerbForm=Ger _ _ _ _ 19 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4272 # text = Induction of DNA binding activity was associated temporally with Epo-induced phosphorylation of nuclear TAL1 protein. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 DNA dna NOUN NN Number=Sing _ _ _ _ 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 temporally temporally ADV RB _ _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 Epo-induced Epo-induce ADJ JJ Degree=Pos _ _ _ _ 11 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 TAL1 tAL1 NUM CD NumType=Card _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4273 # text = These results indicate that Epo acts at both transcriptional and posttranscriptional levels on the TAL1 locus in Friend virus-induced erythroblasts and establish a link between Epo signaling mechanisms and a member of a family of transcription factors involved in the differentiation of diverse cell lineages. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Epo Epo PROPN NNP Number=Sing _ _ _ _ 6 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 at at ADP IN _ _ _ _ _ 8 both both CCONJ CC _ _ _ _ _ 9 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 posttranscriptional posttranscriptional ADJ JJ Degree=Pos _ _ _ _ 12 levels level NOUN NNS Number=Plur _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 TAL1 tAL1 NUM CD NumType=Card _ _ _ _ 16 locus locus NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 Friend Friend PROPN NNP Number=Sing _ _ _ _ 19 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 erythroblasts erythroblast NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 establish establish VERB VB VerbForm=Inf _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 link link NOUN NN Number=Sing _ _ _ _ 27 between between ADP IN _ _ _ _ _ 28 Epo Epo PROPN NNP Number=Sing _ _ _ _ 29 signaling signaling VERB VBG VerbForm=Ger _ _ _ _ 30 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 member member NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 family family NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 transcription transcription NOUN NN Number=Sing _ _ _ _ 39 factors factor NOUN NNS Number=Plur _ _ _ _ 40 involved involved ADJ JJ Degree=Pos _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 diverse diverse ADJ JJ Degree=Pos _ _ _ _ 46 cell cell NOUN NN Number=Sing _ _ _ _ 47 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4274 # text = Document 003003731 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003731 003003731 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4275 # text = C/EBP proteins activate transcription from the human immunodeficiency virus type 1 long terminal repeat in macrophages/monocytes. 1 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 / / PUNCT , _ _ _ _ SpaceAfter=No 3 EBP EBP PROPN NNP Number=Sing _ _ _ _ 4 proteins protein VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 activate activate ADJ JJ Degree=Pos _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 11 virus virus NOUN NN Number=Sing _ _ _ _ 12 type type NOUN NN Number=Sing _ _ _ _ 13 1 1 NUM CD NumType=Card _ _ _ _ 14 long long ADJ JJ Degree=Pos _ _ _ _ 15 terminal terminal NOUN NN Number=Sing _ _ _ _ 16 repeat repeat NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 / / PUNCT , _ _ _ _ SpaceAfter=No 20 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4276 # text = Three binding sites for C/EBP proteins are found in the human immunodeficiency virus type 1 (HIV-1) long terminal repeat (LTR) (V.M. 1 Three three VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 binding binding VERB VBG VerbForm=Ger _ _ _ _ 3 sites site NOUN NNS Number=Plur _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 / / PUNCT , _ _ _ _ SpaceAfter=No 7 EBP Ebp PROPN NNP Number=Sing _ _ _ _ 8 proteins protein NOUN NNS Number=Plur _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 15 virus virus NOUN NN Number=Sing _ _ _ _ 16 type type NOUN NN Number=Sing _ _ _ _ 17 1 1 NUM CD NumType=Card _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 X LS _ _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 long long ADJ JJ Degree=Pos _ _ _ _ 24 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 25 repeat repeat NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 V.M. V.M. PROPN NNP Number=Sing _ _ _ _ # sent_id = 4277 # text = Tesmer, A.Rajadhyaksha, J.Babin, and M.Bina, Proc.Natl.Acad.Sci. USA 90:7298-7302, 1993). 1 Tesmer Tesmer PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 A.Rajadhyaksha A.Rajadhyaksha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 J.Babin J.Babin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 M.Bina M.Bina PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 Proc.Natl.Acad.Sci Proc.Natl.Acad.Sci PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ 12 USA USA PROPN NNP Number=Sing _ _ _ _ 13 90:7298-7302 90:7298-7302 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 1993 1993 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4278 # text = We have determined the functional role of C/EBP proteins and C/EBP sites in regulating transcription from the HIV- 1 LTR in monocytes/macrophages. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 functional functional ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 / / PUNCT , _ _ _ _ SpaceAfter=No 10 EBP EBP PROPN NNP Number=Sing _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 EBP EBP PROPN NNP Number=Sing _ _ _ _ 16 sites site NOUN NNS Number=Plur _ _ _ _ 17 in in SCONJ IN _ _ _ _ _ 18 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ _ 24 1 1 NUM CD NumType=Card _ _ _ _ 25 LTR Ltr NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 / / PUNCT , _ _ _ _ SpaceAfter=No 29 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4279 # text = Inhibition of endogenous C/EBP proteins, using either an excess of C/EBP binding sites or a trans- dominant negative inhibitor, demonstrated that C/EBP proteins are required for basal and activated levels of HIV-1 LTR transcription in the promonocytic cell line U937. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 4 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 EBP EBP PROPN NNP Number=Sing _ _ _ _ 7 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 using use VERB VBG VerbForm=Ger _ _ _ _ 10 either either CCONJ CC _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 excess excess NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 EBP EBP PROPN NNP Number=Sing _ _ _ _ 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 sites site NOUN NNS Number=Plur _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 trans tran NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ _ 23 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 24 negative negative ADJ JJ Degree=Pos _ _ _ _ 25 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 that that SCONJ IN _ _ _ _ _ 29 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 31 EBP Ebp PROPN NNP Number=Sing _ _ _ _ 32 proteins protein NOUN NNS Number=Plur _ _ _ _ 33 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 basal basal NOUN NN Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 39 levels level NOUN NNS Number=Plur _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 1 1 NUM CD NumType=Card _ _ _ _ 44 LTR Ltr NOUN NN Number=Sing _ _ _ _ 45 transcription transcription NOUN NN Number=Sing _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 49 cell cell NOUN NN Number=Sing _ _ _ _ 50 line line NOUN NN Number=Sing _ _ _ _ 51 U937 U937 NUM CD NumType=Card _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 4280 # text = Northern (RNA) blots and binding assays showed that NF-IL6 is the only known C/EBP family member which is increased when U937 cells are activated. 1 Northern Northern PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 RNA RNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 blots blot NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 binding binding VERB VBG VerbForm=Ger _ _ _ _ 8 assays assay NOUN NNS Number=Plur _ _ _ _ 9 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 only only ADV RB _ _ _ _ _ 17 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 / / PUNCT , _ _ _ _ SpaceAfter=No 20 EBP EBP PROPN NNP Number=Sing _ _ _ _ 21 family family NOUN NN Number=Sing _ _ _ _ 22 member member NOUN NN Number=Sing _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 when when ADV WRB PronType=Int _ _ _ _ 27 U937 U937 NUM CD NumType=Card _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4281 # text = Mutational analyses of the HIV-1 LTR showed that one C/EBP site is required for normal LTR transcription both before and after cellular activation and that the two 3' C/EBP sites are functionally equivalent. 1 Mutational Mutational ADJ JJ Degree=Pos _ _ _ _ 2 analyses analysis NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 LTR LTR PROPN NNP Number=Sing _ _ _ _ 9 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 one one NUM CD NumType=Card _ _ _ _ 12 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 / / PUNCT , _ _ _ _ SpaceAfter=No 14 EBP EBP PROPN NNP Number=Sing _ _ _ _ 15 site site NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 normal normal ADJ JJ Degree=Pos _ _ _ _ 20 LTR Ltr NOUN NN Number=Sing _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 both both CCONJ CC _ _ _ _ _ 23 before before ADV RB _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 after after ADP IN _ _ _ _ _ 26 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 that that SCONJ IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 two two NUM CD NumType=Card _ _ _ _ 32 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ' ' PUNCT `` _ _ _ _ _ 34 C/ C/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 EBP Ebp NOUN NN Number=Sing _ _ _ _ 36 sites site NOUN NNS Number=Plur _ _ _ _ 37 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 38 functionally functionally ADV RB _ _ _ _ _ 39 equivalent equivalent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 4282 # text = However, transcription from crippled HIV-1 LTRs lacking C/EBP sites can still be induced following activation of U937 cells. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 crippled crippl ADJ JJ Degree=Pos _ _ _ _ 6 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 LTRs LTR NOUN NNS Number=Plur _ _ _ _ 10 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 11 C/ C/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 12 EBP EBP PROPN NNP Number=Sing _ _ _ _ 13 sites site NOUN NNS Number=Plur _ _ _ _ 14 can can AUX MD VerbForm=Fin _ _ _ _ 15 still still ADV RB _ _ _ _ _ 16 be be AUX VB VerbForm=Inf _ _ _ _ 17 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 following follow VERB VBG VerbForm=Ger _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 U937 U937 NUM CD NumType=Card _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4283 # text = Several models are suggested for how elevated NF-IL6 may participate in an autostimulatory loop involving HIV infection, macrophage activation, cytokine expression, and HIV replication. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 models model NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 suggested suggest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 for for SCONJ IN _ _ _ _ _ 6 how how ADV WRB PronType=Int _ _ _ _ 7 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 11 may may AUX MD VerbForm=Fin _ _ _ _ 12 participate participate VERB VB VerbForm=Inf _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 autostimulatory autostimulatory ADJ JJ Degree=Pos _ _ _ _ 16 loop loop NOUN NN Number=Sing _ _ _ _ 17 involving involve VERB VBG VerbForm=Ger _ _ _ _ 18 HIV HIV PROPN NNP Number=Sing _ _ _ _ 19 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 HIV HIV PROPN NNP Number=Sing _ _ _ _ 29 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4284 # text = Document 003003732 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003732 003003732 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4285 # text = Effects of diesel organic extracts on chemokine production by peripheral blood mononuclear cells. 1 Effects Effects NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 diesel diesel ADJ JJ Degree=Pos _ _ _ _ 4 organic organic ADJ JJ Degree=Pos _ _ _ _ 5 extracts extract NOUN NNS Number=Plur _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 chemokine chemokine NOUN NN Number=Sing _ _ _ _ 8 production production NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 11 blood blood NOUN NN Number=Sing _ _ _ _ 12 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4286 # text = BACKGROUND: Polyaromatic hydrocarbons (PAHs) associated with diesel exhaust particles (DEPs) are found in the atmospheric urban pollution. 1 BACKGROUND background ADP IN _ _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Polyaromatic Polyaromatic ADJ JJ Degree=Pos _ _ _ _ 4 hydrocarbons hydrocarbon NOUN NNS Number=Plur _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 PAHs PAH NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 diesel diesel NOUN NN Number=Sing _ _ _ _ 11 exhaust exhaust NOUN NN Number=Sing _ _ _ _ 12 particles particle NOUN NNS Number=Plur _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 DEPs DEP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 atmospheric atmospheric ADJ JJ Degree=Pos _ _ _ _ 21 urban urban ADJ JJ Degree=Pos _ _ _ _ 22 pollution pollution NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4287 # text = Such compounds have been shown to favor IgE production, bronchial hyperresponsiveness, and airway inflammation. 1 Such such ADJ JJ Degree=Pos _ _ _ _ 2 compounds compound NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 favor favor VERB VB VerbForm=Inf _ _ _ _ 8 IgE IgE PROPN NNP Number=Sing _ _ _ _ 9 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 bronchial bronchial ADJ JJ Degree=Pos _ _ _ _ 12 hyperresponsiveness hyperresponsiveness NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 airway airway NOUN NN Number=Sing _ _ _ _ 16 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4288 # text = Chemokines are a group of chemotactic cytokines involved in the recruitment of inflammatory cells. 1 Chemokines Chemokine NOUN NNS Number=Plur _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 group group NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 chemotactic chemotactic ADJ JJ Degree=Pos _ _ _ _ 7 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 8 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 4289 # text = OBJECTIVE: 1 OBJECTIVE objective NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 4290 # text = We investigated the effect of DEP-PAHs on the release and mRNA expression of IL-8, MCP-1, and RANTES by PBMCs obtained from healthy subjects. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effect effect NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 DEP DEP NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 PAHs PAHs NOUN NNS Number=Plur _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 release release NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 mRNA mRNa DET DT Definite=Ind|PronType=Art _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 MCP MCP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 RANTES RANTES PROPN NNP Number=Sing _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 PBMCs Pbmcs PROPN NNPS Number=Plur _ _ _ _ 28 obtained obtaine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 from from ADP IN _ _ _ _ _ 30 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 31 subjects subjects NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4291 # text = METHODS: Protein production in supernatants was assessed by ELISA, and mRNA expression was evaluated by semiquantitative RT-PCR. 1 METHODS method NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Protein protein PROPN NNP Number=Sing _ _ _ _ 4 production production NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 supernatants supernatant NOUN NNS Number=Plur _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 assessed assess VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 ELISA ELISA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 mRNA mRNA DET DT Definite=Ind|PronType=Art _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 evaluated evaluate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 semiquantitative semiquantitative ADJ JJ Degree=Pos _ _ _ _ 19 RT Rt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 PCR PCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4292 # text = RESULTS: Secretion of IL-8 and RANTES increased in a dose-dependent manner with increasing concentrations of DEP-PAHs (range, 0.5 ng to 50 ng/mL). 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Secretion Secretion NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 8 8 PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 RANTES RANTES PROPN NNP Number=Sing _ _ _ _ 10 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 16 manner manner NOUN NN Number=Sing _ _ _ _ 17 with with SCONJ IN _ _ _ _ _ 18 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 19 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 DEP DEP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 PAHs PAHs PROPN NNP Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 range range NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 0.5 0.5 NUM CD NumType=Card _ _ _ _ 28 ng ng NOUN NN Number=Sing _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 50 50 NUM CD NumType=Card _ _ _ _ 31 ng/ ng/ PUNCT HYPH _ _ _ _ SpaceAfter=No 32 mL mL NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4293 # text = On the contrary, the release of MCP-1 was significantly inhibited, also in a dose-dependent manner. 1 On on ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 contrary contrary ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 release release NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 MCP MCP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 significantly significantly ADV RB _ _ _ _ _ 13 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 also also ADV RB _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 21 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4294 # text = Messenger RNA production coding for IL-8, RANTES, and MCP-1 showed parallel variations to the production of the correspondent proteins. 1 Messenger Messenger PROPN NNP Number=Sing _ _ _ _ 2 RNA RNA PROPN NNP Number=Sing _ _ _ _ 3 production production NOUN NN Number=Sing _ _ _ _ 4 coding code VERB VBG VerbForm=Ger _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 RANTES RANTES PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 MCP Mcp NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 parallel parallel ADJ JJ Degree=Pos _ _ _ _ 18 variations variation NOUN NNS Number=Plur _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 production production NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 correspondent correspondent ADJ JJ Degree=Pos _ _ _ _ 25 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4295 # text = Effects of DEP-PAHs became significant at 7 hours and up to 48 hours time culture for MCP-1, and up to 24 hours time culture for IL-8 and RANTES. 1 Effects Effects PROPN NNPS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 DEP DEP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 PAHs PAHs PROPN NNPS Number=Plur _ _ _ _ 6 became become VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 significant significant ADJ JJ Degree=Pos _ _ _ _ 8 at at ADP IN _ _ _ _ _ 9 7 7 NUM CD NumType=Card _ _ _ _ 10 hours hour NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 up up ADV RB _ _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 48 48 NUM CD NumType=Card _ _ _ _ 15 hours hour NOUN NNS Number=Plur _ _ _ _ 16 time time NOUN NN Number=Sing _ _ _ _ 17 culture culture NOUN NN Number=Sing _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 MCP MCP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 up up ADP IN _ _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 24 24 NUM CD NumType=Card _ _ _ _ 27 hours hour NOUN NNS Number=Plur _ _ _ _ 28 time time NOUN NN Number=Sing _ _ _ _ 29 culture culture NOUN NN Number=Sing _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 8 8 PROPN NNP Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 RANTES RANTES PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 4296 # text = Moreover, supernatants from DEP-PAH-activated cells, compared with those of controls, exhibited a significantly enhanced chemotactic activity for neutrophils and eosinophils, which was significantly inhibited by pretreatment with anti-IL-8 and anti-RANTES neutralizing antibodies, respectively. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 supernatants supernatant NOUN NNS Number=Plur _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 DEP DEP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 PAH PAH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 controls control NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 exhibited exhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 significantly significantly ADV RB _ _ _ _ _ 21 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 chemotactic chemotactic ADJ JJ Degree=Pos _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 which which PRON WDT PronType=Rel _ _ _ _ 30 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 31 significantly significantly ADV RB _ _ _ _ _ 32 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 pretreatment pretreatment NOUN NN Number=Sing _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 anti-IL anti-il SYM $ _ _ _ _ SpaceAfter=No 37 - - SYM SYM _ _ _ _ SpaceAfter=No 38 8 8 NUM CD NumType=Card _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 anti-RANTES anti-RANTES NOUN NNS Number=Plur _ _ _ _ 41 neutralizing neutralize VERB VBG VerbForm=Ger _ _ _ _ 42 antibodies antibody NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 4297 # text = CONCLUSION: 1 CONCLUSION conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 4298 # text = These findings suggest that the chemokine pathways are modulated by DEP-PAHs at the transcriptional level, reinforcing the idea that the development of inflammatory reactions might be affected by diesel exhaust emission. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 chemokine chemokine NOUN NN Number=Sing _ _ _ _ 7 pathways pathway NOUN NNS Number=Plur _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 modulated modulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 DEP DEP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 PAHs PAHs PROPN NNPS Number=Plur _ _ _ _ 14 at at ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 17 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 reinforcing reinforce VERB VBG VerbForm=Ger _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 idea idea NOUN NN Number=Sing _ _ _ _ 22 that that SCONJ IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 development development NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 27 reactions reaction NOUN NNS Number=Plur _ _ _ _ 28 might might AUX MD VerbForm=Fin _ _ _ _ 29 be be AUX VB VerbForm=Inf _ _ _ _ 30 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 diesel diesel NOUN NN Number=Sing _ _ _ _ 33 exhaust exhaust NOUN NN Number=Sing _ _ _ _ 34 emission emission NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4299 # text = Document 003003736 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003736 003003736 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4300 # text = Acetylsalicylic acid and sodium salicylate inhibit LPS-induced NF-kappa B/c-Rel nuclear translocation, and synthesis of tissue factor (TF) and tumor necrosis factor alfa (TNF-alpha) in human monocytes. 1 Acetylsalicylic Acetylsalicylic ADJ JJ Degree=Pos _ _ _ _ 2 acid acid NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 sodium sodium NOUN NN Number=Sing _ _ _ _ 5 salicylate salicylate NOUN NN Number=Sing _ _ _ _ 6 inhibit inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 LPS Lps NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa PROPN NNP Number=Sing _ _ _ _ 13 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 /c /c PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 Rel Rel PROPN NNP Number=Sing _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 translocation translocation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 tissue tissue NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 TF TF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 tumor tumor NOUN NN Number=Sing _ _ _ _ 30 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 31 factor factor NOUN NN Number=Sing _ _ _ _ 32 alfa alfa NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 human human ADJ JJ Degree=Pos _ _ _ _ 40 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4301 # text = We have investigated the effects of acetylsalicylic acid and sodium salicylate on the LPS-induced synthesis of the pro-coagulant protein tissue factor (TF) and the pro-inflammatory protein tumor necrosis factor-alpha (TNF-alpha), as well as the prostaglandin PGE2 in human monocytes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 acetylsalicylic acetylsalicylic ADJ JJ Degree=Pos _ _ _ _ 8 acid acid NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 sodium sodium NOUN NN Number=Sing _ _ _ _ 11 salicylate salicylate NOUN NN Number=Sing _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 pro-coagulant pro-coagulant ADJ JJ Degree=Pos _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ _ 22 tissue tissue NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 TF TF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 pro-inflammatory pro-inflammatory ADJ JJ Degree=Pos _ _ _ _ 30 protein protein NOUN NN Number=Sing _ _ _ _ 31 tumor tumor NOUN NN Number=Sing _ _ _ _ 32 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 33 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 -alpha -alpha NOUN NN Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 as as ADV RB _ _ _ _ _ 42 well well ADV RB Degree=Pos _ _ _ _ 43 as as ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 prostaglandin prostaglandin NOUN NN Number=Sing _ _ _ _ 46 PGE2 Pge2 NOUN NN Number=Sing _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 human human ADJ JJ Degree=Pos _ _ _ _ 49 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 4302 # text = Both drugs dose-dependently inhibited LPS-induced TF and TNF-alpha synthesis at the mRNA and the protein level, and reduced PGE2 production. 1 Both both DET DT _ _ _ _ _ 2 drugs drug NOUN NNS Number=Plur _ _ _ _ 3 dose dose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 dependently dependently ADV RB _ _ _ _ _ 6 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 TF Tf NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 alpha alpha NOUN NN Number=Sing _ _ _ _ 15 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 16 at at ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ _ 22 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 PGE2 Pge2 NUM CD NumType=Card _ _ _ _ 27 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4303 # text = As evidenced by electro mobility shift assay (EMSA) and the use of a NF-kappa B prototypic probe, these drugs probably exert their inhibitory effects by interference with the nuclear translocation of NF-kappa B/c-Rel proteins. 1 As as SCONJ IN _ _ _ _ _ 2 evidenced evidence VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 electro electro NUM CD NumType=Card _ _ _ _ 5 mobility mobility NOUN NN Number=Sing _ _ _ _ 6 shift shift NOUN NN Number=Sing _ _ _ _ 7 assay assay NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 EMSA EMSA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 use use NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B b PROPN NNP Number=Sing _ _ _ _ 20 prototypic prototypic ADJ JJ Degree=Pos _ _ _ _ 21 probe probe NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 24 drugs drug NOUN NNS Number=Plur _ _ _ _ 25 probably probably ADV RB _ _ _ _ _ 26 exert exert ADP IN Typo=Yes _ _ _ _ 27 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 28 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 29 effects effect NOUN NNS Number=Plur _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 interference interference NOUN NN Number=Sing _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 35 translocation translocation NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 kappa kappa PROPN NNP Number=Sing _ _ _ _ 40 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 /c /c NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 Rel Rel NOUN NN Number=Sing _ _ _ _ 44 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 4304 # text = These data may expand the understanding of the anti-thrombotic and anti-inflammatory effects of these drugs when activation of monocytes occurs. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 may may AUX MD VerbForm=Fin _ _ _ _ 4 expand expand VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 understanding understanding NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 anti-thrombotic anti-thrombotic ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 12 effects effect NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 15 drugs drug NOUN NNS Number=Plur _ _ _ _ 16 when when ADV WRB PronType=Int _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 20 occurs occur NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4305 # text = Document 003003741 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003741 003003741 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4306 # text = HLA class I-mediated induction of cell proliferation involves cyclin E-mediated inactivation of Rb function and induction of E2F activity. 1 HLA Hla ADJ JJ Degree=Pos _ _ _ _ 2 class class NOUN NN Number=Sing _ _ _ _ 3 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 4 - - PUNCT : _ _ _ _ SpaceAfter=No 5 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 induction induction NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 10 involves involf NOUN NNS Number=Plur _ _ _ _ 11 cyclin cyclin NOUN NN Number=Sing _ _ _ _ 12 E- E- SYM SYM _ _ _ _ SpaceAfter=No 13 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 inactivation inactivation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 Rb Rb PROPN NNP Number=Sing _ _ _ _ 17 function function NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 induction induction NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 E2 E2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 F F PROPN NNP Number=Sing _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4307 # text = Chronic rejection of transplanted organs is manifested as atherosclerosis of the blood vessels of the allograft. 1 Chronic Chronic ADJ JJ Degree=Pos _ _ _ _ 2 rejection rejection NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 transplanted transplant VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 organs organ NOUN NNS Number=Plur _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 manifested manifested VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 atherosclerosis atherosclerosis NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 blood blood NOUN NN Number=Sing _ _ _ _ 13 vessels vessel NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 allograft allograft NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4308 # text = HLA class I Ags have been implicated to play a major role in this process, since signaling via HLA class I molecules can induce the proliferation of aortic endothelial as well as smooth muscle cells. 1 HLA Hla ADJ JJ Degree=Pos _ _ _ _ 2 class class NOUN NN Number=Sing _ _ _ _ 3 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 4 Ags ag NOUN NNS Number=Plur _ _ _ _ 5 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 7 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 play play VERB VB VerbForm=Inf _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 major major ADJ JJ Degree=Pos _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 15 process process NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 since since SCONJ IN _ _ _ _ _ 18 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 19 via via ADP IN _ _ _ _ _ 20 HLA HLA PROPN NNP Number=Sing _ _ _ _ 21 class class NOUN NN Number=Sing _ _ _ _ 22 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 23 molecules molecule NOUN NNS Number=Plur _ _ _ _ 24 can can AUX MD VerbForm=Fin _ _ _ _ 25 induce induce VERB VB VerbForm=Inf _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 aortic aortic ADJ JJ Degree=Pos _ _ _ _ 30 endothelial endothelial NOUN NN Number=Sing _ _ _ _ 31 as as ADV RB _ _ _ _ _ 32 well well ADV RB Degree=Pos _ _ _ _ 33 as as ADP IN _ _ _ _ _ 34 smooth smooth ADJ JJ Degree=Pos _ _ _ _ 35 muscle muscle NOUN NN Number=Sing _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 4309 # text = In this study, we show that HLA class I-mediated induction of cell proliferation correlates with inactivation of the Rb protein in the T cell line Jurkat as well as human aortic endothelial cells. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 HLA HLA PROPN NNP Number=Sing _ _ _ _ 9 class class NOUN NN Number=Sing _ _ _ _ 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 induction induction NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 17 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 inactivation inactivation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 Rb Rb PROPN NNP Number=Sing _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 T T PROPN NNP Number=Sing _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 line line NOUN NN Number=Sing _ _ _ _ 29 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 30 as as ADV RB _ _ _ _ _ 31 well well ADV RB Degree=Pos _ _ _ _ 32 as as ADP IN _ _ _ _ _ 33 human human ADJ JJ Degree=Pos _ _ _ _ 34 aortic aortic ADJ JJ Degree=Pos _ _ _ _ 35 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 4310 # text = HLA class I-mediated inactivation of Rb can be inhibited specifically by neutralizing 1 HLA Hla ADJ JJ Degree=Pos _ _ _ _ 2 class class NOUN NN Number=Sing _ _ _ _ 3 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 4 - - PUNCT : _ _ _ _ SpaceAfter=No 5 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 inactivation inactivation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Rb Rb PROPN NNP Number=Sing _ _ _ _ 9 can can AUX MD VerbForm=Fin _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 specifically specifically ADV RB _ _ _ _ _ 13 by by SCONJ IN _ _ _ _ _ 14 neutralizing neutralize VERB VBG VerbForm=Ger _ _ _ _ # sent_id = 4311 # text = Abs to basic fibroblast growth factor (bFGF), suggesting a role for FGF receptors in the signaling process. 1 Abs Ab NOUN NNS Number=Plur _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 basic basic ADJ JJ Degree=Pos _ _ _ _ 4 fibroblast fibroblast ADJ JJ Degree=Pos _ _ _ _ 5 growth growth NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 bFGF bFGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 role role NOUN NN Number=Sing _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 FGF Fgf ADJ JJ Degree=Pos _ _ _ _ 16 receptors receptor NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 signaling signaling NOUN NN Number=Sing _ _ _ _ 20 process process NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4312 # text = Signaling through HLA class I molecules induced cyclin E-associated kinase activity within 4 h in quiescent endothelial cells, and appeared to mediate the inactivation of Rb. 1 Signaling signal VERB VBG VerbForm=Ger _ _ _ _ 2 through through ADP IN _ _ _ _ _ 3 HLA HLA PROPN NNP Number=Sing _ _ _ _ 4 class class NOUN NN Number=Sing _ _ _ _ 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 molecules molecule NOUN NNS Number=Plur _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 cyclin cyclin NOUN NN Number=Sing _ _ _ _ 9 E- E- PUNCT , _ _ _ _ SpaceAfter=No 10 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 within within ADP IN _ _ _ _ _ 14 4 4 NUM CD NumType=Card _ _ _ _ 15 h h NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 quiescent quiescent ADJ JJ Degree=Pos _ _ _ _ 18 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 inactivation inactivation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 Rb Rb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4313 # text = A cdk2 inhibitor, Olomoucine, as well as a dominant-negative cdk2 construct prevented HLA class I-mediated inactivation of Rb; in contrast, dominant-negative cdk4 and cdk6 constructs had no effect. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 cdk2 cdk2 NOUN NN Number=Sing _ _ _ _ 3 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 Olomoucine Olomoucine PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 as as ADV RB _ _ _ _ _ 8 well well ADV RB Degree=Pos _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 dominant dominant NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 negative negative ADJ JJ Degree=Pos _ _ _ _ 14 cdk2 cdk2 NOUN NN Number=Sing _ _ _ _ 15 construct construct NOUN NN Number=Sing _ _ _ _ 16 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 HLA Hla PROPN NNP Number=Sing _ _ _ _ 18 class class NOUN NN Number=Sing _ _ _ _ 19 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 inactivation inactivation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 Rb Rb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ; ; PUNCT , _ _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 dominant dominant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 negative negative ADJ JJ Degree=Pos _ _ _ _ 32 cdk4 cdk4 NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 cdk6 cdk6 NOUN NN Number=Sing _ _ _ _ 35 constructs constructs NOUN NNS Number=Plur _ _ _ _ 36 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 37 no no DET DT _ _ _ _ _ 38 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 4314 # text = Furthermore, there was no increase in cyclin D-associated kinase activity upon HLA class I ligation, suggesting that cyclin E-dependent kinase activity mediates 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 there there PRON EX _ _ _ _ _ 4 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 no no DET DT _ _ _ _ _ 6 increase increase NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 cyclin cyclin NOUN NN Number=Sing _ _ _ _ 9 D- D- PUNCT , _ _ _ _ SpaceAfter=No 10 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 upon upon ADP IN _ _ _ _ _ 14 HLA HLA PROPN NNP Number=Sing _ _ _ _ 15 class class NOUN NN Number=Sing _ _ _ _ 16 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 17 ligation ligation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 cyclin cyclin NOUN NN Number=Sing _ _ _ _ 22 E- E- SYM SYM _ _ _ _ SpaceAfter=No 23 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 24 kinase kinase NOUN NN Number=Sing _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ _ 26 mediates mediate NOUN NNS Number=Plur _ _ _ _ # sent_id = 4315 # text = Rb inactivation, leading to E2F activation and cell proliferation. 1 Rb Rb PROPN NNP Number=Sing _ _ _ _ 2 inactivation inactivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 leading lead VERB VBG VerbForm=Ger _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 E2 E2 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 F F PROPN NNP Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4316 # text = Document 003003746 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003746 003003746 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4317 # text = A conserved motif in the promoters of several cytokines expressed by human Th2-type lymphocytes. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 conserved conserve ADJ JJ Degree=Pos _ _ _ _ 3 motif motif NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 promoters promoter NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 several several ADJ JJ Degree=Pos _ _ _ _ 9 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 10 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 Th2 th2 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 type type NOUN NN Number=Sing _ _ _ _ 16 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4318 # text = We have recently found a novel conserved motif in the promoters of several T-cell-expressed cytokines [human interleukin-2, -4, -5 and -13 and human and mouse granulocyte/macrophage-colony stimulating factor (GM-CSF)]. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 recently recently ADV RB _ _ _ _ _ 4 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 novel novel NOUN NN Number=Sing _ _ _ _ 7 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 motif motif NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 promoters promoter NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 several several ADJ JJ Degree=Pos _ _ _ _ 14 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 cell cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 19 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 - - SYM SYM _ _ _ _ SpaceAfter=No 26 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 - - SYM SYM _ _ _ _ SpaceAfter=No 29 5 5 NUM CD NumType=Card _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 - - SYM SYM _ _ _ _ SpaceAfter=No 32 13 13 NUM CD NumType=Card _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 human human NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 mouse mouse NOUN NN Number=Sing _ _ _ _ 37 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 / / PUNCT , _ _ _ _ SpaceAfter=No 39 macrophage macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 colony colony NOUN NN Number=Sing _ _ _ _ 42 stimulating stimulating NOUN NN Number=Sing _ _ _ _ 43 factor factor NOUN NN Number=Sing _ _ _ _ 44 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 45 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 49 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 4319 # text = It contains a core sequence CTTGG ... CCAAG which is present as part of larger palindromic sequences in each gene. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 core core NOUN NN Number=Sing _ _ _ _ 5 sequence sequence NOUN NN Number=Sing _ _ _ _ 6 CTTGG Cttgg PROPN NNP Number=Sing _ _ _ _ 7 ... ... PUNCT , _ _ _ _ _ 8 CCAAG Ccaag PROPN NNP Number=Sing _ _ _ _ 9 which which PRON WDT PronType=Rel _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 present present ADJ JJ Degree=Pos _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 part part NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 larger larger ADJ JJR Degree=Cmp _ _ _ _ 16 palindromic palindromic ADJ JJ Degree=Pos _ _ _ _ 17 sequences sequence NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 each each DET DT _ _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4320 # text = This suggest that they may interact with a new family of trans-acting factors. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 5 may may AUX MD VerbForm=Fin _ _ _ _ 6 interact interact VERB VB VerbForm=Inf _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 new new ADJ JJ Degree=Pos _ _ _ _ 10 family family NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 acting act VERB VBG VerbForm=Ger _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4321 # text = In transfection assays, the human GM-CSF element has a strong positive effect on the expression of a reporter gene by the human T cell line Jurkat J6 upon stimulation. 1 In in ADP IN _ _ _ _ _ 2 transfection transfection NOUN NN Number=Sing _ _ _ _ 3 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 CSF CSF PROPN NNP Number=Sing _ _ _ _ 10 element element NOUN NN Number=Sing _ _ _ _ 11 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 strong strong ADJ JJ Degree=Pos _ _ _ _ 14 positive positive ADJ JJ Degree=Pos _ _ _ _ 15 effect effect NOUN NN Number=Sing _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 reporter reporter NOUN NN Number=Sing _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 T t NOUN NN Number=Sing _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 line line NOUN NN Number=Sing _ _ _ _ 29 Jurk Jurk PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 at at ADP IN _ _ _ _ _ 31 J6 J6 PROPN NNP Number=Sing _ _ _ _ 32 upon upon ADP IN _ _ _ _ _ 33 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4322 # text = In DNA mobility shift assays, this sequence can give either six different specific bands which are competed out by different parts of the sequence or one specific band which is competed out by each of the inverted repeats, depending on the reconstitution conditions. 1 In in ADP IN _ _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ _ 3 mobility mobility NOUN NN Number=Sing _ _ _ _ 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 sequence sequence NOUN NN Number=Sing _ _ _ _ 9 can can AUX MD VerbForm=Fin _ _ _ _ 10 give give VERB VB VerbForm=Inf _ _ _ _ 11 either either CCONJ CC _ _ _ _ _ 12 six six NUM CD NumType=Card _ _ _ _ 13 different different ADJ JJ Degree=Pos _ _ _ _ 14 specific specific ADJ JJ Degree=Pos _ _ _ _ 15 bands band NOUN NNS Number=Plur _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 competed compet VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 out out ADP RP _ _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 different different ADJ JJ Degree=Pos _ _ _ _ 22 parts part NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 sequence sequence NOUN NN Number=Sing _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 one one NUM CD NumType=Card _ _ _ _ 28 specific specific ADJ JJ Degree=Pos _ _ _ _ 29 band band NOUN NN Number=Sing _ _ _ _ 30 which which PRON WDT PronType=Rel _ _ _ _ 31 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 competed compet VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 out out ADP RP _ _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 each each DET DT _ _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 inverted invert VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 repeats repeat NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 depending depend VERB VBG VerbForm=Ger _ _ _ _ 42 on on ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 reconstitution reconstitution NOUN NN Number=Sing _ _ _ _ 45 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 4323 # text = In different genes, the core sequences are separated by integer numbers of helical turns. 1 In in ADP IN _ _ _ _ _ 2 different different ADJ JJ Degree=Pos _ _ _ _ 3 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 core core NOUN NN Number=Sing _ _ _ _ 7 sequences sequence NOUN NNS Number=Plur _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 separated separate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 integer integer NOUN NN Number=Sing _ _ _ _ 12 numbers number NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 helical helical ADJ JJ Degree=Pos _ _ _ _ 15 turns turn NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4324 # text = Considering the strong positive regulatory effect of this element and its presence in several T-cell-expressed cytokine genes, it may be crucial to the coordinated expression of these cytokines in T helper cells. 1 Considering consider VERB VBG VerbForm=Ger _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 strong strong ADJ JJ Degree=Pos _ _ _ _ 4 positive positive ADJ JJ Degree=Pos _ _ _ _ 5 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 6 effect effect NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 9 element element NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 12 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 presence presence NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 several several ADJ JJ Degree=Pos _ _ _ _ 16 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 cell cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 24 may may AUX MD VerbForm=Fin _ _ _ _ 25 be be AUX VB VerbForm=Inf _ _ _ _ 26 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 coordinated coordinate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 33 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 T T PROPN NNP Number=Sing _ _ _ _ 36 helper helper ADJ JJR Degree=Cmp _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4325 # text = Document 003003751 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003751 003003751 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4326 # text = Human immunodeficiency viruses containing heterologous enhancer/promoters are replication competent and exhibit different lymphocyte tropisms. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 3 viruses viruse NOUN NNS Number=Plur _ _ _ _ 4 containing contain VERB VBG VerbForm=Ger _ _ _ _ 5 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 6 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 promoters promoter NOUN NNS Number=Plur _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 replication replication NOUN NN Number=Sing _ _ _ _ 11 competent competent ADJ JJ Degree=Pos _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 exhibit exhibit ADJ JJ Degree=Pos _ _ _ _ 14 different different ADJ JJ Degree=Pos _ _ _ _ 15 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 16 tropisms tropism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4327 # text = The human immunodeficiency virus (HIV) type 1 long terminal repeat (LTR) contains binding sites for nuclear factor kappa B (NF-kappa B) and the constitutively expressed transcription factor Sp1, both of which are highly conserved in HIV and simian immunodeficiency virus isolates. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 4 virus virus NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 type type NOUN NN Number=Sing _ _ _ _ 9 1 1 NUM CD NumType=Card _ _ _ _ 10 long long ADJ JJ Degree=Pos _ _ _ _ 11 terminal terminal NOUN NN Number=Sing _ _ _ _ 12 repeat repeat NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 sites site NOUN NNS Number=Plur _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 kappa kappa NOUN NN Number=Sing _ _ _ _ 23 B b NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 constitutively constitutively ADV RB _ _ _ _ _ 33 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ _ 36 Sp1 sp1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 both both DET DT _ _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 which which PRON WDT PronType=Rel _ _ _ _ 41 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 42 highly highly ADV RB _ _ _ _ _ 43 conserved conserve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 HIV HIV PROPN NNP Number=Sing _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 simian simian ADJ JJ Degree=Pos _ _ _ _ 48 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 49 virus virus NOUN NN Number=Sing _ _ _ _ 50 isolates isolate NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 4328 # text = To delineate the effects of these motifs on the replicative capacity of HIV and to explore the possibility of extending the virus host range, known heterologous enhancer/promoters were inserted into the HIV-1 LTR in place of the NF-kappa B and Sp1 binding sites. 1 To to PART TO _ _ _ _ _ 2 delineate delineate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effects effect NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 motifs motif NOUN NNS Number=Plur _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 replicative replicative ADJ JJ Degree=Pos _ _ _ _ 11 capacity capacity NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 HIV HIV PROPN NNP Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 explore explore VERB VB VerbForm=Inf _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 possibility possibility NOUN NN Number=Sing _ _ _ _ 19 of of SCONJ IN _ _ _ _ _ 20 extending extend VERB VBG VerbForm=Ger _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 virus virus NOUN NN Number=Sing _ _ _ _ 23 host host NOUN NN Number=Sing _ _ _ _ 24 range range NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 28 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 / / PUNCT , _ _ _ _ SpaceAfter=No 30 promoters promoter NOUN NNS Number=Plur _ _ _ _ 31 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 inserted insert VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 into into ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT , _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ _ 38 LTR Ltr NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 place place NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 kappa kappa PROPN NNP Number=Sing _ _ _ _ 46 B b PROPN NNP Number=Sing _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 Sp1 sp1 PROPN NNP Number=Sing _ _ _ _ 49 binding bind VERB VBG VerbForm=Ger _ _ _ _ 50 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 4329 # text = The effects of these substitutions on viral replication in transfected HeLa cells and on HIV infection of human peripheral blood lymphocytes or continuous T-leukemia cell lines were evaluated. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 substitutions substitution NOUN NNS Number=Plur _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 viral viral ADJ JJ Degree=Pos _ _ _ _ 8 replication replication NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 HIV Hiv NOUN NN Number=Sing _ _ _ _ 16 infection infection NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 20 blood blood NOUN NN Number=Sing _ _ _ _ 21 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 continuous continuous ADJ JJ Degree=Pos _ _ _ _ 24 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 lines line NOUN NNS Number=Plur _ _ _ _ 28 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 evaluated evaluate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4330 # text = HIVs in which the NF-kappa B/Sp1 enhancer plus the downstream TATA element were replaced with heterologous enhancer/promoters were also constructed. 1 HIVs HIV NOUN NNS Number=Plur _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 which which PRON WDT PronType=Rel _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 / / PUNCT , _ _ _ _ SpaceAfter=No 10 Sp1 sp1 NUM CD NumType=Card _ _ _ _ 11 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 12 plus plus CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 15 TATA TATa NOUN NN Number=Sing _ _ _ _ 16 element element NOUN NN Number=Sing _ _ _ _ 17 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 replaced replace VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 21 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 / / PUNCT , _ _ _ _ SpaceAfter=No 23 promoters promoter NOUN NNS Number=Plur _ _ _ _ 24 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 also also ADV RB _ _ _ _ _ 26 constructed construct VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4331 # text = Viruses containing the human cytomegalovirus immediate-early enhancer exhibited infectious kinetics similar to that of wild-type HIV in activated human peripheral blood lymphocytes and AA2 cells but replicated less efficiently in H9 and CEM cells. 1 Viruses Viruse NOUN NNS Number=Plur _ _ _ _ 2 containing contain VERB VBG VerbForm=Ger _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 cytomegalovirus cytomegalovirus NOUN NN Number=Sing _ _ _ _ 6 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 early early ADJ JJ Degree=Pos _ _ _ _ 9 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 10 exhibited exhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 infectious infectious ADJ JJ Degree=Pos _ _ _ _ 12 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 13 similar similar ADJ JJ Degree=Pos _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 type type NOUN NN Number=Sing _ _ _ _ 20 HIV Hiv AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 in in ADV RB _ _ _ _ _ 22 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 25 blood blood NOUN NN Number=Sing _ _ _ _ 26 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 AA2 AA2 NUM CD NumType=Card _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 but but CCONJ CC _ _ _ _ _ 31 replicated replicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 less less ADV RBR Degree=Cmp _ _ _ _ 33 efficiently efficiently ADV RB _ _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 H9 H9 PROPN NNP Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 CEM CEM PROPN NNP Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 4332 # text = These studies indicate that heterologous enhancer elements are capable of restoring 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 6 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 7 elements element NOUN NNS Number=Plur _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 capable capable ADJ JJ Degree=Pos _ _ _ _ 10 of of SCONJ IN _ _ _ _ _ 11 restoring restore VERB VBG VerbForm=Ger _ _ _ _ # sent_id = 4333 # text = Tat responsiveness to the HIV LTR in the context of directing reporter gene expression as well as in the production of infectious progeny virions. 1 Tat Tat VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 HIV HIV PROPN NNP Number=Sing _ _ _ _ 6 LTR LTR PROPN NNP Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 context context NOUN NN Number=Sing _ _ _ _ 10 of of SCONJ IN _ _ _ _ _ 11 directing direct VERB VBG VerbForm=Ger _ _ _ _ 12 reporter reporter NOUN NN Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 as as ADV RB _ _ _ _ _ 16 well well ADV RB Degree=Pos _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 production production NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 infectious infectious ADJ JJ Degree=Pos _ _ _ _ 23 progeny progeny NOUN NN Number=Sing _ _ _ _ 24 virions virion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4334 # text = Document 003003752 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003752 003003752 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4335 # text = Naive (CD45RA+) 1 Naive naive PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 CD45RA CD45RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 +) +) SYM NFP _ _ _ _ _ # sent_id = 4336 # text = T lymphocytes are more sensitive to oxidative stress-induced signals than memory (CD45RO+) cells. 1 T t NOUN NN Number=Sing _ _ _ _ 2 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 more more ADV RBR _ _ _ _ _ 5 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 8 stress stress NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 signals signal NOUN NNS Number=Plur _ _ _ _ 12 than than ADP IN _ _ _ _ _ 13 memory memory NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 CD45RO Cd45ro NUM CD NumType=Card _ _ _ SpaceAfter=No 16 + + SYM SYM _ _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4337 # text = Formation of reactive oxygen intermediates (ROI) after oxidative stress has been shown to be an activation signal for T lymphocytes, e.g., expression of IL-2 and its receptor are induced. 1 Formation Formation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 4 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 5 intermediates intermediate NOUN NNS Number=Plur _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 ROI ROI X AFX _ _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 after after ADP IN _ _ _ _ _ 10 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 11 stress stress NOUN NN Number=Sing _ _ _ _ 12 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 14 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 be be AUX VB VerbForm=Inf _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 signal signal NOUN NN Number=Sing _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 e.g. e.g. X FW _ _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 2 2 NUM CD NumType=Card _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 33 receptor receptor NOUN NN Number=Sing _ _ _ _ 34 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 4338 # text = These ROI-induced effects can, to a large extent, be attributed to the activation of the transcription factor NF-kappaB. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 ROI Roi NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 large large ADJ JJ Degree=Pos _ _ _ _ 11 extent extent NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 attributed attribute VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4339 # text = Now we have examined whether naive and memory T lymphocytes differ in their sensitivity to ROI-mediated signals. 1 Now now ADV RB _ _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 whether whether SCONJ IN _ _ _ _ _ 6 naive naive ADJ JJ Degree=Pos _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 memory memory ADJ JJ Degree=Pos _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 11 differ differ VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 ROI ROI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4340 # text = When CD45RA+ (naive) and CD45RO+ (memory) 1 When when ADV WRB PronType=Int _ _ _ _ 2 CD45RA CD45RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 + + SYM SYM _ _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 naive naive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 CD45RO CD45RO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 + + SYM SYM _ _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 memory memory NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ # sent_id = 4341 # text = T lymphocytes were directly stimulated with H2O2, NF-kappaB nuclear translocation was stronger in naive cells than in memory cells and it could be induced with lower doses. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 directly directly ADV RB _ _ _ _ _ 5 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 H2O2 H2O2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 translocation translocation NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 stronger stronger ADJ JJR Degree=Cmp _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 naive naive ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 than than ADP IN _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 memory memory NOUN NN Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 25 could could AUX MD VerbForm=Fin _ _ _ _ 26 be be AUX VB VerbForm=Inf _ _ _ _ 27 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 lower lower ADJ JJR Degree=Cmp _ _ _ _ 30 doses dos NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4342 # text = The composition of the induced nuclear NF-kappaB (levels of p50 and RelA proteins) was similar in these cell types. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 composition composition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 levels level NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 p50 p50 NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 RelA Rela NOUN NN Number=Sing _ _ _ _ 16 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 similar similar ADJ JJ Degree=Pos _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4343 # text = The magnitude and kinetics of intracellular 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 magnitude magnitude NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 intracellular intracelular ADJ JJ Degree=Pos _ _ _ _ # sent_id = 4344 # text = ROI were similar, suggesting that there were no differences in ROI-forming mechanisms or antioxidative capacities. 1 ROI ROI PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 similar similar ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 there there PRON EX _ _ _ _ _ 8 were be VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 no no DET DT _ _ _ _ _ 10 differences difference NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 ROI ROI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 forming form VERB VBG VerbForm=Ger _ _ _ _ 15 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 antioxidative antioxidative ADJ JJ Degree=Pos _ _ _ _ 18 capacities capacitie NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 4345 # text = The probable regulatory point was the cytoplasmic IkappaB inhibitor: in CD45RA+ cells, H2O2 caused a more profound depression in the levels of IkappaB alpha. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 probable probable ADJ JJ Degree=Pos _ _ _ _ 3 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 4 point point NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 8 IkappaB Ikappab NOUN NN Number=Sing _ _ _ _ 9 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 : : PUNCT : _ _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 CD45RA CD45RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 + + SYM SYM _ _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 H2O2 H2O2 NUM CD NumType=Card _ _ _ _ 17 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 more more ADV RBR _ _ _ _ _ 20 profound profound ADJ JJ Degree=Pos _ _ _ _ 21 depression depression NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 levels level NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ _ 27 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4346 # text = These findings indicate that T cells representing different activation and/or differentiation stages can be differentially responsive to ROI-mediated signals. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 representing represent VERB VBG VerbForm=Ger _ _ _ _ 8 different different ADJ JJ Degree=Pos _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 or or CCONJ CC _ _ _ _ _ 13 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 14 stages stage NOUN NNS Number=Plur _ _ _ _ 15 can can AUX MD VerbForm=Fin _ _ _ _ 16 be be AUX VB VerbForm=Inf _ _ _ _ 17 differentially differentially ADV RB _ _ _ _ _ 18 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 ROI ROI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4347 # text = Document 003003755 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003755 003003755 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4348 # text = Transcription factors Sp1 and AP-2 mediate induction of acid sphingomyelinase during monocytic differentiation. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 mediate mediate NOUN NN Number=Sing _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 acid acid ADJ JJ Degree=Pos _ _ _ _ 12 sphingomyelinase sphingomyelinase NOUN NN Number=Sing _ _ _ _ 13 during during ADP IN _ _ _ _ _ 14 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4349 # text = Cells from the human monocytic leukemia cell line THP-1 differentiate towards a macrophage-like phenotype when stimulated with phorbol 12-myristate -13- acetate (PMA), 1,25-dihydroxy-vitamin D3, and various other agents. 1 Cells cell NOUN NNS Number=Plur _ _ _ _ 2 from from ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 6 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 line line NOUN NN Number=Sing _ _ _ _ 9 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 differentiate differentiate NOUN NN Number=Sing _ _ _ _ 13 towards towards ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 macrophage macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 like like ADJ JJ Degree=Pos _ _ _ _ 18 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 19 when when ADV WRB PronType=Int _ _ _ _ 20 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 23 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 myristate myristate NOUN NN Number=Sing _ _ _ _ 26 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ _ 28 acetate acetate NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 -dihydroxy-vitamin -dihydroxy-vitamin ADJ JJ Degree=Pos _ _ _ _ 35 D3 D3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 various various ADJ JJ Degree=Pos _ _ _ _ 39 other other ADJ JJ Degree=Pos _ _ _ _ 40 agents agent NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 4350 # text = We demonstrate here that the expression of the lysosomal enzyme acid sphingomyelinase (ASM; E.C.3.1.4.12) is induced during this process and is strongly elevated in differentiated THP-1 cells, as well as in differentiated human mononuclear phagocytes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 lysosomal lysosomal ADJ JJ Degree=Pos _ _ _ _ 10 enzyme enzyme NOUN NN Number=Sing _ _ _ _ 11 acid acid NOUN NN Number=Sing _ _ _ _ 12 sphingomyelinase sphingomyelinase NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 ASM ASm INTJ UH _ _ _ _ SpaceAfter=No 15 ; ; PUNCT , _ _ _ _ _ 16 E.C.3.1.4.12 E.C.3.1.4.12 X LS _ _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 during during ADP IN _ _ _ _ _ 21 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 22 process process NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 strongly strongly ADV RB _ _ _ _ _ 26 elevated elevate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 as as ADV RB _ _ _ _ _ 35 well well ADV RB Degree=Pos _ _ _ _ 36 as as ADP IN _ _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 differentiated differentiated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 human human ADJ JJ Degree=Pos _ _ _ _ 40 mononuclear mononuclear NOUN NN Number=Sing _ _ _ _ 41 phagocytes phagocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 4351 # text = Using Northern blotting, 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 3 blotting blotting NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ # sent_id = 4352 # text = RNase protection assay, and nuclear run-on analyses, we show that the up-regulation of ASM expression is regulated mainly at the level of transcription and that new protein synthesis is required for enhanced ASM activity. 1 RNase RNase NOUN NN Number=Sing _ _ _ _ 2 protection protection NOUN NN Number=Sing _ _ _ _ 3 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 run run VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 on on ADP IN _ _ _ _ _ 10 analyses analysis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 13 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 regulation regulation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 ASM ASm NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 mainly mainly ADV RB _ _ _ _ _ 25 at at ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 level level NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 32 new new ADJ JJ Degree=Pos _ _ _ _ 33 protein protein NOUN NN Number=Sing _ _ _ _ 34 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 35 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 ASM ASm ADJ JJ Degree=Pos _ _ _ _ 40 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 4353 # text = This cell-type specific induction by PMA treatment was further investigated with respect to transcriptional control. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 type type NOUN NN Number=Sing _ _ _ _ 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 induction induction NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 PMA PMA PROPN NNP Number=Sing _ _ _ _ 9 treatment treatment NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 further further ADV RB _ _ _ _ _ 12 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 respect respect NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 17 control control NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4354 # text = A series of 5' deletion derivatives of the upstream regulatory region were used in transient transfection assays to identify promoter elements required for basal and inducible gene expression. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 series series NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 ' ' PUNCT `` _ _ _ _ _ 6 deletion deletion NOUN NN Number=Sing _ _ _ _ 7 derivatives derivative NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 11 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 12 region region NOUN NN Number=Sing _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 transient transient ADJ JJ Degree=Pos _ _ _ _ 17 transfection transfection NOUN NN Number=Sing _ _ _ _ 18 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 identify identify VERB VB VerbForm=Inf _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 elements element NOUN NNS Number=Plur _ _ _ _ 23 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 basal basal NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 28 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4355 # text = A PMA responsive element was localized to a region between -319 and -219 bp upstream of the initiation codon and co-transfections with transcription factor expression plasmids for AP-2 and Sp1 resulted in augmented ASM promoter activity, which was abolished when the binding sites for these two factors were deleted. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 PMA PMA PROPN NNP Number=Sing _ _ _ _ 3 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 4 element element NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 localized localize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 region region NOUN NN Number=Sing _ _ _ _ 10 between between ADP IN _ _ _ _ _ 11 - - SYM SYM _ _ _ _ SpaceAfter=No 12 319 319 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 - - SYM SYM _ _ _ _ SpaceAfter=No 15 219 219 NUM CD NumType=Card _ _ _ _ 16 bp bp NOUN NN Number=Sing _ _ _ _ 17 upstream upstream NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 initiation initiation NOUN NN Number=Sing _ _ _ _ 21 codon codon NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 co-transfections co-transfection NOUN NNS Number=Plur _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 2 2 NUM CD NumType=Card _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 35 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 augmented augment VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 ASM ASm NOUN NN Number=Sing _ _ _ _ 39 promoter promoter NOUN NN Number=Sing _ _ _ _ 40 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 which which PRON WDT PronType=Rel _ _ _ _ 43 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 44 abolished abolish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 45 when when ADV WRB PronType=Int _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 binding bind VERB VBG VerbForm=Ger _ _ _ _ 48 sites site NOUN NNS Number=Plur _ _ _ _ 49 for for ADP IN _ _ _ _ _ 50 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 51 two two NUM CD NumType=Card _ _ _ _ 52 factors factor NOUN NNS Number=Plur _ _ _ _ 53 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 54 deleted delete VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 4356 # text = Using electrophoretic mobility shift assays and supershift assays we demonstrate that this region is specifically bound by Sp1 and AP-2. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 3 mobility mobility NOUN NN Number=Sing _ _ _ _ 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assays assay NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 supershift supershift ADJ JJ Degree=Pos _ _ _ _ 8 assays assays NOUN NNS Number=Plur _ _ _ _ 9 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 10 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 13 region region NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 specifically specifically ADV RB _ _ _ _ _ 16 bound bound ADJ JJ Degree=Pos _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 Sp1 sp1 NUM CD NumType=Card _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4357 # text = These factors are present in nuclear extracts prepared from both induced and uninduced THP-1 cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 present present ADJ JJ Degree=Pos _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 extracts extract NOUN NNS Number=Plur _ _ _ _ 8 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 both both CCONJ CC _ _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 uninduced uninduced VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4358 # text = However, the intensity of the complex formed appeared to increase when nuclear extracts from PMA-treated cells were used. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 intensity intensity NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 complex complex NOUN NN Number=Sing _ _ _ _ 8 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 increase increase VERB VB VerbForm=Inf _ _ _ _ 12 when when ADV WRB PronType=Int _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 extracts extract NOUN NNS Number=Plur _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4359 # text = From these studies, we conclude that a concerted action of the transcription factors AP-2 and Sp1 is essential for the up -regulation of ASM expression during the process of macrophage differentiation. 1 From from ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 concerted concerted ADJ JJ Degree=Pos _ _ _ _ 10 action action NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factors factor NOUN NNS Number=Plur _ _ _ _ 15 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 essential essential ADJ JJ Degree=Pos _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 up up NOUN NN Number=Sing _ _ _ _ 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 regulation regulation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 ASM ASm NOUN NN Number=Sing _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 during during ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 process process NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 35 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4360 # text = Document 003003757 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003757 003003757 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4361 # text = Glucocorticoid hormone suppression of human neutrophil-mediated tumor cell cytostasis. 1 Glucocorticoid Glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 2 hormone hormone NOUN NN Number=Sing _ _ _ _ 3 suppression suppression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 neutrophil neutrophil NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 tumor tumor NOUN NN Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 cytostasis cytostasis NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4362 # text = In the present study, we have investigated the effect of glucocorticoid hormones on neutrophil-mediated tumor cell cytostasis and found that hydrocortisone and a synthetic hormone, dexamethasone (Dex), inhibited cytostasis in the presence or absence of tumor necrosis factor-alpha. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 effect effect NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 13 hormones hormone NOUN NNS Number=Plur _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 neutrophil neutrophil NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 tumor tumor NOUN NN Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 cytostasis cytostasis NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 24 hydrocortisone hydrocortisone NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 28 hormone hormone NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 Dex Dex PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 cytostasis cytostasis NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 presence presence NOUN NN Number=Sing _ _ _ _ 40 or or CCONJ CC _ _ _ _ _ 41 absence absence NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 tumor tumor NOUN NN Number=Sing _ _ _ _ 44 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 45 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 4363 # text = The effect of Dex was completely reversed by a glucocorticoid receptor antagonist, RU38486. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Dex Dex PROPN NNP Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 completely completely ADV RB _ _ _ _ _ 7 reversed reverse VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 antagonist antagonist NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 RU38486 RU38486 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 4364 # text = To clarify the underlying mechanisms, we examined effects of Dex on the binding avidity of beta2 integrin on the neutrophil surface and how these might in turn affect neutrophil-to-tumor cell binding. 1 To to PART TO _ _ _ _ _ 2 clarify clarify VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 underlying underlying ADJ JJ Degree=Pos _ _ _ _ 5 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 8 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 effects effect NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 Dex Dex NOUN NN Number=Sing _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 avidity avidity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 beta2 beta2 NUM CD NumType=Card _ _ _ _ 18 integrin integrin NOUN NN Number=Sing _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 22 surface surface NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 how how ADV WRB PronType=Int _ _ _ _ 25 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 26 might might NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 turn turn NOUN NN Number=Sing _ _ _ _ 29 affect affect NOUN NN Number=Sing _ _ _ _ 30 neutrophil neutrophil NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 to to ADP IN _ _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 tumor tumor NOUN NN Number=Sing _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ _ 36 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 4365 # text = Dex was found to inhibit these neutrophil properties, and RU38486 completely suppressed both forms of Dex inhibition. 1 Dex Dex PROPN NNP Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 8 properties property NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 RU38486 RU38486 PROPN NNP Number=Sing _ _ _ _ 12 completely completely ADV RB _ _ _ _ _ 13 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 both both DET DT _ _ _ _ _ 15 forms form NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 Dex Dex NOUN NN Number=Sing _ _ _ _ 18 inhibition inhibition NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 4366 # text = Taken together, our findings suggest that glucocorticoid hormone inhibition of neutrophil-mediated tumor cell cytostasis is at least partially due to a lowering of the ligand binding avidity of beta2 integrin on the neutrophil surface. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 5 findings finding NOUN NNS Number=Plur _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 9 hormone hormone NOUN NN Number=Sing _ _ _ _ 10 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 neutrophil neutrophil NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 tumor tumor NOUN NN Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 cytostasis cytostasis NOUN NN Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 at at ADV RB _ _ _ _ _ 20 least least ADV RBS Degree=Sup _ _ _ _ 21 partially partially ADV RB _ _ _ _ _ 22 due due ADP IN _ _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 lowering lowering NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 ligand ligand NOUN NN Number=Sing _ _ _ _ 29 binding bind VERB VBG VerbForm=Ger _ _ _ _ 30 avidity avidity NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 beta2 beta2 NUM CD NumType=Card _ _ _ _ 33 integrin integrin NOUN NN Number=Sing _ _ _ _ 34 on on ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 37 surface surface NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4367 # text = Document 003003759 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003759 003003759 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4368 # text = Induction of vascular cell adhesion molecule-1 by low-density lipoprotein. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 6 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 low low ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 density density NOUN NN Number=Sing _ _ _ _ 13 lipoprotein lipoprotein NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4369 # text = Low-density lipoprotein (LDL) is a well-established risk factor for atherosclerosis. 1 Low low ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 density density NOUN NN Number=Sing _ _ _ _ 4 lipoprotein lipoprotein NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 LDL LDL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 well well ADV RB Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 established establish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 risk risk NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 atherosclerosis atherosclerosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4370 # text = When endothelial cells are incubated with this lipoprotein in pathophysiologic amounts, the cells are activated. 1 When when ADV WRB PronType=Int _ _ _ _ 2 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 incubated incubate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 lipoprotein lipoprotein NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 pathophysiologic pathophysiologic ADJ JJ Degree=Pos _ _ _ _ 11 amounts amount NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4371 # text = Among the documented cellular responses to LDL is increased recruitment of monocytes, which are believed to play a major role in promoting intimal plaque formation. 1 Among among ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 documented document VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 5 responses response NOUN NNS Number=Plur _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 LDL LDL PROPN NNP Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 believed believe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 play play VERB VB VerbForm=Inf _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 major major ADJ JJ Degree=Pos _ _ _ _ 21 role role NOUN NN Number=Sing _ _ _ _ 22 in in SCONJ IN _ _ _ _ _ 23 promoting promote VERB VBG VerbForm=Ger _ _ _ _ 24 intimal intimal ADJ JJ Degree=Pos _ _ _ _ 25 plaque plaque NOUN NN Number=Sing _ _ _ _ 26 formation formation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4372 # text = The findings presented here link an atheogenic lipoprotein, LDL, with the induction of an adhesion molecule important in atherogenesis Human LDL induces the vascular cell adhesion molecule-1 (VCAM-1) transcriptionally with an increase in mRNA levels through activation of the VCAM promoter. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 presented present VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 here here ADV RB PronType=Dem _ _ _ _ 5 link link NOUN NN Number=Sing _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 atheogenic atheogenic ADJ JJ Degree=Pos _ _ _ _ 8 lipoprotein lipoprotein NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 LDL LDL INTJ UH _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 induction induction NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 18 molecule molecule NOUN NN Number=Sing _ _ _ _ 19 important important ADJ JJ Degree=Pos _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 atherogenesis atherogenesis DET DT Number=Sing|PronType=Dem _ _ _ _ 22 Human Human PROPN NNP Number=Sing _ _ _ _ 23 LDL LDL PROPN NNP Number=Sing _ _ _ _ 24 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 29 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 transcriptionally transcriptionally ADV RB _ _ _ _ _ 38 with with ADP IN _ _ _ _ _ 39 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 increase increase NOUN NN Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 43 levels level NOUN NNS Number=Plur _ _ _ _ 44 through through ADP IN _ _ _ _ _ 45 activation activation NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 VCAM VCAm PROPN NNP Number=Sing _ _ _ _ 49 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 4373 # text = This effect is blocked by anti-VCAM antibodies. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 anti-VCAM anti-vcam ADJ JJ Degree=Pos _ _ _ _ 7 antibodies antibody NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 4374 # text = After a 2-day incubation in LDL, the binding of NF-kappa B, which is believed to be a key oxidative-stress sensor for VCAM regulation, remains at basal level. 1 After after ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 day day NOUN NN Number=Sing _ _ _ _ 6 incubation incubation NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 LDL LDL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 binding binding NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 believed believe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 key key ADJ JJ Degree=Pos _ _ _ _ 25 oxidative oxidative ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 stress stress NOUN NN Number=Sing _ _ _ _ 28 sensor sensor NOUN NN Number=Sing _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 VCAM Vcam PROPN NNP Number=Sing _ _ _ _ 31 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 at at ADP IN _ _ _ _ _ 35 basal basal ADJ JJ Degree=Pos _ _ _ _ 36 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 4375 # text = In contrast, the binding activities of AP-1 and GATA, on the other hand, are increased by LDL. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 binding bind VERB VBG VerbForm=Ger _ _ _ _ 6 activities activity NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 other other ADJ JJ Degree=Pos _ _ _ _ 17 hand hand NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 LDL LDL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4376 # text = Thus, a component of LDL-enhanced endothelial recruitment of monocytes is attributed to VCAM-1 expression, which appears to be mediated through AP-1 and GATA. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 component component NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 LDL LDL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 10 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 attributed attribute VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 be be AUX VB VerbForm=Inf _ _ _ _ 25 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 through through ADP IN _ _ _ _ _ 27 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4377 # text = These data identify LDL as a VCAM-inducer possibly distinct from cytokines and endotoxin. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 identify identify NOUN NN Number=Sing _ _ _ _ 4 LDL LDL NOUN NN Number=Sing _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 inducer inducer NOUN NN Number=Sing _ _ _ _ 10 possibly possibly ADV RB _ _ _ _ _ 11 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 endotoxin endotoxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4378 # text = Document 003003760 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003760 003003760 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4379 # text = p38 mitogen-activated protein kinase mediates signal integration of TCR/CD28 costimulation in primary murine T cells. 1 p38 p38 NUM CD NumType=Card _ _ _ _ 2 mitogen mitogen NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT : _ _ _ _ SpaceAfter=No 4 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 kinase kinase NOUN NN Number=Sing _ _ _ _ 7 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 signal signal ADJ JJ Degree=Pos _ _ _ _ 9 integration integration NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 TCR/CD28 TCR/CD28 NUM CD NumType=Card _ _ _ _ 12 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 primary primary ADJ JJ Degree=Pos _ _ _ _ 15 murine murine NOUN NN Number=Sing _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4380 # text = Optimal T cell activation requires two signals, one generated by TCR and another by the CD28 costimulatory receptor. 1 Optimal optimal PROPN NNP Number=Sing _ _ _ _ 2 T t PROPN NNP Number=Sing _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 two two NUM CD NumType=Card _ _ _ _ 7 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 one one NUM CD NumType=Card _ _ _ _ 10 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 TCR Tcr NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 another another DET DT _ _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 18 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 19 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4381 # text = In this study, we investigated the regulation of costimulation-induced mitogen-activated protein kinase (MAPK) activation in primary mouse T cells. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 regulation regulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 costimulation costimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 kinase kinase NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 MAPK MAPK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 primary primary ADJ JJ Degree=Pos _ _ _ _ 24 mouse mouse NOUN NN Number=Sing _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4382 # text = In contrast to that reported for human Jurkat T cells, we found that p38 MAPK, but not Jun NH2-terminal kinase (JNK), is weakly activated upon stimulation with either anti-CD3 or anti-CD28 in murine thymocytes and splenic T cells. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 13 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 p38 p38 PROPN NNP Number=Sing _ _ _ _ 16 MAPK MAPK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 but but CCONJ CC _ _ _ _ _ 19 not not ADV RB _ _ _ _ _ 20 Jun Jun PROPN NNP Number=Sing _ _ _ _ 21 NH2 NH2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT : _ _ _ _ SpaceAfter=No 23 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 24 kinase kinase NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 JNK JNK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 weakly weakly ADV RB _ _ _ _ _ 31 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 upon upon ADP IN _ _ _ _ _ 33 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 either either CCONJ CC _ _ _ _ _ 36 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 37 or or CCONJ CC _ _ _ _ _ 38 anti-CD28 anti-CD28 NUM CD NumType=Card _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 murine murine ADJ JJ Degree=Pos _ _ _ _ 41 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 splenic splenic ADJ JJ Degree=Pos _ _ _ _ 44 T t PROPN NNP Number=Sing _ _ _ _ 45 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 4383 # text = However, p38 MAPK is activated strongly and synergistically by either CD3/CD28 coligation or PMA/Ca2+ ionophore stimulation, which mimics TCR-CD3/CD28-mediated signaling. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 p38 p38 NUM CD NumType=Card _ _ _ _ 4 MAPK MAPK PROPN NNP Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 strongly strongly ADV RB _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 synergistically synergistically ADV RB _ _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 either either DET DT _ _ _ _ _ 12 CD3/CD28 CD3/CD28 NOUN NN Number=Sing _ _ _ _ 13 coligation coligation NOUN NN Number=Sing _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 PMA Pma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 / / PUNCT , _ _ _ _ SpaceAfter=No 17 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 + + SYM SYM _ _ _ _ _ 19 ionophore ionophore ADJ JJ Degree=Pos _ _ _ _ 20 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 mimics mimics VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 TCR-CD3/CD28-mediated TCR-CD3/CD28-mediate ADJ JJ Degree=Pos _ _ _ _ 25 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4384 # text = Activation of p38 MAPK correlates closely with the stimulation of T cell proliferation. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 p38 p38 NUM CD NumType=Card _ _ _ _ 4 MAPK MAPK PROPN NNP Number=Sing _ _ _ _ 5 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 closely closely ADV RB _ _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 4385 # text = In contrast, PMA-induced JNK activation is inhibited by Ca2+ ionophore. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 JNK JNK PROPN NNP Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 + + SYM SYM _ _ _ _ _ 14 ionophore ionophore ADV RB _ _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 4386 # text = T cell proliferation and production of IL-2, IL-4, and IFN-gamma induced by both CD3 and CD3/CD28 ligation and the nuclear expression of the c-Jun and ATF-2 proteins are each blocked by the p38 MAPK inhibitor SB203580. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 production production NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 IFN IFN ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 gamma gamma NOUN NN Number=Sing _ _ _ _ 19 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 both both DET DT _ _ _ _ _ 22 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 CD3/CD28 Cd3/cd28 NOUN NN Number=Sing _ _ _ _ 25 ligation ligation NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 Jun Jun PROPN NNP Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 ATF ATF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 2 2 NUM CD NumType=Card _ _ _ _ 39 proteins protein NOUN NNS Number=Plur _ _ _ _ 40 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 41 each each DET DT _ _ _ _ _ 42 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 by by ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 p38 p38 PROPN NNP Number=Sing _ _ _ _ 46 MAPK MAPK PROPN NNP Number=Sing _ _ _ _ 47 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 48 SB Sb NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 203580 203580 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 4387 # text = Our findings demonstrate that p38 MAPK 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 p38 p38 NUM CD NumType=Card _ _ _ _ 6 MAPK Mapk NOUN NN Number=Sing _ _ _ _ # sent_id = 4388 # text = 1) plays an important role in signal integration during costimulation of primary mouse T cells, 2) may be involved in the induction of c-Jun activation and augmentation of AP-1 transcriptional activity, and 3) regulates whether T cells enter a state of functional unresponsiveness. 1 1 1 X LS _ _ _ _ SpaceAfter=No 2 ) ) PUNCT -RRB- _ _ _ _ _ 3 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 important important ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 signal signal ADJ JJ Degree=Pos _ _ _ _ 9 integration integration NOUN NN Number=Sing _ _ _ _ 10 during during ADP IN _ _ _ _ _ 11 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 primary primary ADJ JJ Degree=Pos _ _ _ _ 14 mouse mouse NOUN NN Number=Sing _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 2 2 X LS _ _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 may may AUX MD VerbForm=Fin _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 involved involved ADJ JJ Degree=Pos _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 induction induction NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 Jun Jun PROPN NNP Number=Sing _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 augmentation augmentation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ _ 37 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 38 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 3 3 X LS _ _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 44 whether whether SCONJ IN _ _ _ _ _ 45 T t PROPN NNP Number=Sing _ _ _ _ 46 cells cell NOUN NNS Number=Plur _ _ _ _ 47 enter enter VERB VB VerbForm=Inf _ _ _ _ 48 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 49 state state NOUN NN Number=Sing _ _ _ _ 50 of of ADP IN _ _ _ _ _ 51 functional functional ADJ JJ Degree=Pos _ _ _ _ 52 unresponsiveness unresponsiveness NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4389 # text = Document 003003761 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003761 003003761 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4390 # text = The p65 subunit of NF-kappa B regulates I kappa B by two distinct mechanisms. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 p65 p65 NUM CD NumType=Card _ _ _ _ 3 subunit subunit NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B b PROPN NNP Number=Sing _ _ _ _ 9 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 kappa kappa PROPN NNP Number=Sing _ _ _ _ 12 B b PROPN NNP Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 two two NUM CD NumType=Card _ _ _ _ 15 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 16 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4391 # text = Transcription factor NF-kappa B (p50/p65) is generally localized to the cytoplasm by its inhibitor 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 / / SYM SYM _ _ _ _ SpaceAfter=No 10 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 generally generally ADV RB _ _ _ _ _ 14 localized localize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 18 by by SCONJ IN _ _ _ _ _ 19 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 20 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ # sent_id = 4392 # text = I kappa B. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa PROPN NNP Number=Sing _ _ _ _ 3 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ _ # sent_id = 4393 # text = Overproduced I kappa B, free from NF-kappa B, is rapidly degraded. 1 Overproduced Overproduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 3 kappa kappa PROPN NNP Number=Sing _ _ _ _ 4 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 free free ADJ JJ Degree=Pos _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 rapidly rapidly ADV RB _ _ _ _ _ 15 degraded degrad VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4394 # text = Overexpression of p65 increases endogenous I kappa B protein in both carcinoma and lymphoid cells by two mechanisms: protein stabilization and increased transcription of I kappa B mRNA. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 p65 p65 NUM CD NumType=Card _ _ _ _ 4 increases increase NOUN NNS Number=Plur _ _ _ _ 5 endogenous endogenous CCONJ CC _ _ _ _ _ 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 kappa kappa X FW Foreign=Yes _ _ _ _ 8 B b ADJ JJ Degree=Pos _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 both both DET DT _ _ _ _ _ 12 carcinoma carcinoma NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 two two NUM CD NumType=Card _ _ _ _ 18 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 : : PUNCT : _ _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 stabilization stabilization NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 27 kappa kappa PROPN NNP Number=Sing _ _ _ _ 28 B B PROPN NNP Number=Sing _ _ _ _ 29 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4395 # text = In contrast, p65 delta, a naturally occurring splice variant, fails to markedly augment I kappa B protein levels. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 p65 p65 NUM CD NumType=Card _ _ _ _ 5 delta delta NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 naturally naturally ADV RB _ _ _ _ _ 9 occurring occurre ADJ JJ Degree=Pos _ _ _ _ 10 splice splice NOUN NN Number=Sing _ _ _ _ 11 variant variant NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 fails fail VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 markedly markedly ADV RB _ _ _ _ _ 16 augment augment VERB VB VerbForm=Inf _ _ _ _ 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 kappa kappa X FW Foreign=Yes _ _ _ _ 19 B b ADJ JJ Degree=Pos _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4396 # text = Both overexpressed p65 and coexpressed p50 are cytoplasmic, whereas p65 delta is partly nuclear, indicating that the I kappa B induced by p65 can maintain NF-kappa B in the cytoplasm. 1 Both both DET DT _ _ _ _ _ 2 overexpressed overexpressed ADJ JJ Degree=Pos _ _ _ _ 3 p65 p65 NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 coexpressed coexpress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 p50 p50 NOUN NN Number=Sing _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 whereas whereas SCONJ IN _ _ _ _ _ 11 p65 p65 NOUN NN Number=Sing _ _ _ _ 12 delta delta NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 partly partly ADV RB _ _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 21 kappa kappa PROPN NNP Number=Sing _ _ _ _ 22 B b PROPN NNP Number=Sing _ _ _ _ 23 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 p65 p65 NOUN NN Number=Sing _ _ _ _ 26 can can AUX MD VerbForm=Fin _ _ _ _ 27 maintain maintain VERB VB VerbForm=Inf _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappa kappa NOUN NN Number=Sing _ _ _ _ 31 B b NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4397 # text = Thus, p65 and I kappa B are linked in an autoregulatory loop, ensuring that NF-kappa B is held in the cytoplasm until cells are specifically induced to translocate it to the nucleus. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 p65 p65 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B b PROPN NNP Number=Sing _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 linked link VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 autoregulatory autoregulatory ADJ JJ Degree=Pos _ _ _ _ 13 loop loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 ensuring ensure VERB VBG VerbForm=Ger _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa PROPN NNP Number=Sing _ _ _ _ 20 B b PROPN NNP Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 held hold VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 26 until until SCONJ IN _ _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 specifically specifically ADV RB _ _ _ _ _ 30 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 translocate translocate VERB VB VerbForm=Inf _ _ _ _ 33 it it PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 34 to to ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4398 # text = Document 003003763 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003763 003003763 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4399 # text = Mononuclear leukocyte glucocorticoid receptor binding characteristics and down-regulation in major depression. 1 Mononuclear Mononuclear ADJ JJ Degree=Pos _ _ _ _ 2 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 3 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ _ 5 binding bind VERB VBG VerbForm=Ger _ _ _ _ 6 characteristics characteristic NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 down down NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 regulation regulation NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 major major ADJ JJ Degree=Pos _ _ _ _ 13 depression depression NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4400 # text = Some patients with major depressive disorder (MDD) have elevated plasma cortisol concentrations and show failure to suppress cortisol secretion upon administration of dexamethasone (DEX), yet they do not have Cushingoid features. 1 Some some DET DT _ _ _ _ _ 2 patients patient NOUN NNS Number=Plur _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 major major ADJ JJ Degree=Pos _ _ _ _ 5 depressive depressive ADJ JJ Degree=Pos _ _ _ _ 6 disorder disorder NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 MDD MDD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 plasma plasma NOUN NN Number=Sing _ _ _ _ 13 cortisol cortisol NOUN NN Number=Sing _ _ _ _ 14 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 show show VERB VB VerbForm=Inf _ _ _ _ 17 failure failure NOUN NN Number=Sing _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 20 cortisol cortisol NOUN NN Number=Sing _ _ _ _ 21 secretion secretion NOUN NN Number=Sing _ _ _ _ 22 upon upon ADP IN _ _ _ _ _ 23 administration administration NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 DEX DEX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 yet yet CCONJ CC _ _ _ _ _ 31 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 32 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 not not PART RB _ _ _ _ _ 34 have have VERB VB VerbForm=Inf _ _ _ _ 35 Cushingoid Cushingoid ADJ JJ Degree=Pos _ _ _ _ 36 features feature NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 4401 # text = To study whether this represents glucocorticoid (GC) resistance, [3H]-DEX-binding assays were used to measure, in vitro, the GC receptor affinity (1/Kd) and number (Bmax) in mononuclear leukocytes of 11 MDD patients and 15 control subjects. 1 To to PART TO _ _ _ _ _ 2 study study VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 represents represent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 glucocorticoid glucocorticoid PROPN NNP Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 GC GC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 resistance resistance NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 3H 3H INTJ UH _ _ _ _ SpaceAfter=No 14 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 DEX Dex NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 binding binding VERB VBG VerbForm=Ger _ _ _ _ 19 assays assay NOUN NNS Number=Plur _ _ _ _ 20 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 measure measure VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 GC GC PROPN NNP Number=Sing _ _ _ _ 30 receptor receptor NOUN NN Number=Sing _ _ _ _ 31 affinity affinity NOUN NN Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 1/ 1/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 34 Kd kd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 number number NOUN NN Number=Sing _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 Bmax Bmax PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 43 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 11 11 NUM CD NumType=Card _ _ _ _ 46 MDD mdd NOUN NN Number=Sing _ _ _ _ 47 patients patient NOUN NNS Number=Plur _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 15 15 NUM CD NumType=Card _ _ _ _ 50 control control NOUN NN Number=Sing _ _ _ _ 51 subjects subject NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 4402 # text = No receptor abnormalities were detected in the MDD group; thus any cellular defect leading to a lack of responsiveness to GC in the MDD patients, if present, probably lies beyond the initial receptor binding. 1 No no DET DT _ _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ _ 3 abnormalities abnormality NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 MDD mdd PROPN NNP Number=Sing _ _ _ _ 9 group group NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ; ; PUNCT , _ _ _ _ _ 11 thus thus ADV RB _ _ _ _ _ 12 any any DET DT _ _ _ _ _ 13 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 14 defect defect NOUN NN Number=Sing _ _ _ _ 15 leading lead VERB VBG VerbForm=Ger _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 lack lack NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 GC GC PROPN NNP Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 MDD mdd PROPN NNP Number=Sing _ _ _ _ 26 patients patient NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 if if SCONJ IN _ _ _ _ _ 29 present present ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 probably probably ADV RB _ _ _ _ _ 32 lies lie VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 beyond beyond ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 initial initial ADJ JJ Degree=Pos _ _ _ _ 36 receptor receptor NOUN NN Number=Sing _ _ _ _ 37 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 4403 # text = DEX (1.0 mg orally) was administered to study in vivo GC receptor down-regulation. 1 DEX DEX PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 1.0 1.0 NUM CD NumType=Card _ _ _ _ 4 mg mg NOUN NN Number=Sing _ _ _ _ 5 orally orally ADV RB _ _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 administered administer VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 study study VERB VB VerbForm=Inf _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 vivo vivo NOUN NN Number=Sing _ _ _ _ 13 GC GC NOUN NN Number=Sing _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 down down ADV RB _ _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4404 # text = Compared to the control group, fewer depressed subjects down-regulated Bmax after DEX. 1 Compared compare VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 control control NOUN NN Number=Sing _ _ _ _ 5 group group NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 fewer fewer NOUN NN Number=Sing _ _ _ _ 8 depressed depress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 subjects subjects NOUN NNS Number=Plur _ _ _ _ 10 down down ADV RB _ _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 Bmax Bmax PROPN NNP Number=Sing _ _ _ _ 14 after after ADP IN _ _ _ _ _ 15 DEX DEX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4405 # text = By paired t-test, Bmax decreased significantly in the control group but not in the depressed group. 1 By by ADP IN _ _ _ _ _ 2 paired paire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 t- t- PUNCT , _ _ _ _ SpaceAfter=No 4 test test NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 Bmax Bmax PROPN NNP Number=Sing _ _ _ _ 7 decreased decrease VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 significantly significantly ADV RB _ _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 control control NOUN NN Number=Sing _ _ _ _ 12 group group NOUN NN Number=Sing _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 depressed depress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 group group NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 4406 # text = Receptor number on the control day did not correlate significantly with the degree of receptor down-regulation, severity of depression or cortisol concentrations across all the subjects. 1 Receptor Receptor NOUN NN Number=Sing _ _ _ _ 2 number number NOUN NN Number=Sing _ _ _ _ 3 on on ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 control control NOUN NN Number=Sing _ _ _ _ 6 day day NOUN NN Number=Sing _ _ _ _ 7 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 correlate correlate VERB VB VerbForm=Inf _ _ _ _ 10 significantly significantly ADV RB _ _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 degree degree NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 receptor receptor NOUN NN Number=Sing _ _ _ _ 16 down down ADV RB _ _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 severity severity NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 depression depression NOUN NN Number=Sing _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 cortisol cortisol NOUN NN Number=Sing _ _ _ _ 25 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 26 across across ADP IN _ _ _ _ _ 27 all all DET PDT _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 subjects subject NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4407 # text = These results do not lend support to previous reports suggesting that GC resistance in MDD results from a GC receptor-binding abnormality, and they emphasize the importance of considering receptor studies in the context of GC-mediated cell processes in order to identify the exact cellular defect(s) leading to GC resistance. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 lend lend VERB VB VerbForm=Inf _ _ _ _ 6 support support NOUN NN Number=Sing _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 previous previous ADJ JJ Degree=Pos _ _ _ _ 9 reports report NOUN NNS Number=Plur _ _ _ _ 10 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 GC GC PROPN NNP Number=Sing _ _ _ _ 13 resistance resistance NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 MDD MDD ADJ JJ Degree=Pos _ _ _ _ 16 results result NOUN NNS Number=Plur _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 GC GC PROPN NNP Number=Sing _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 binding binding VERB VBG VerbForm=Ger _ _ _ _ 23 abnormality abnormality NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 27 emphasize emphasize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 importance importance NOUN NN Number=Sing _ _ _ _ 30 of of SCONJ IN _ _ _ _ _ 31 considering consider VERB VBG VerbForm=Ger _ _ _ _ 32 receptor receptor NOUN NN Number=Sing _ _ _ _ 33 studies study NOUN NNS Number=Plur _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 context context NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 GC GC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 cell cell NOUN NN Number=Sing _ _ _ _ 42 processes process NOUN NNS Number=Plur _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 order order NOUN NN Number=Sing _ _ _ _ 45 to to PART TO _ _ _ _ _ 46 identify identify VERB VB VerbForm=Inf _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 exact exact ADJ JJ Degree=Pos _ _ _ _ 49 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 50 defect defect NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 52 s s X AFX _ _ _ _ SpaceAfter=No 53 ) ) PUNCT -RRB- _ _ _ _ _ 54 leading lead VERB VBG VerbForm=Ger _ _ _ _ 55 to to ADP IN _ _ _ _ _ 56 GC GC PROPN NNP Number=Sing _ _ _ _ 57 resistance resistance NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4408 # text = Document 003003765 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003765 003003765 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4409 # text = Cutting edge: expression of the NF of activated T cells in eosinophils: regulation by IL-4 and IL-5. 1 Cutting cut NOUN NN Number=Sing _ _ _ _ 2 edge edge NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 : : PUNCT : _ _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 : : PUNCT : _ _ _ _ _ 15 regulation regulation NOUN NN Number=Sing _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 4 4 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4410 # text = We report that NF-AT1 and NF-AT4 are expressed cytoplasmically in resting eosinophils, whereas NF-AT2 and NF-AT3 have not been seen. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 AT1 AT1 PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 AT4 At4 PROPN NNP Number=Sing _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 cytoplasmically cytoplasmically ADV RB _ _ _ _ _ 14 in in SCONJ IN _ _ _ _ _ 15 resting rest VERB VBG VerbForm=Ger _ _ _ _ 16 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 whereas whereas SCONJ IN _ _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 AT2 At2 NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 AT3 AT3 NOUN NN Number=Sing _ _ _ _ 26 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 not not PART RB _ _ _ _ _ 28 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 29 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4411 # text = Likewise, NF-AT1 mRNA and NF-AT4 mRNA have been detected in resting eosinophils, and their levels can be significantly up-regulated by the Th2-associated cytokines IL-4 and IL-5. 1 Likewise likewise ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 AT1 AT1 PROPN NNP Number=Sing _ _ _ _ 6 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 AT4 AT4 PROPN NNP Number=Sing _ _ _ _ 11 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 12 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 14 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 resting rest VERB VBG VerbForm=Ger _ _ _ _ 17 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 levels level NOUN NNS Number=Plur _ _ _ _ 22 can can AUX MD VerbForm=Fin _ _ _ _ 23 be be AUX VB VerbForm=Inf _ _ _ _ 24 significantly significantly ADV RB _ _ _ _ _ 25 up up ADV RB _ _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 Th2 th2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 -associated -associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 33 IL IL ADV RB _ _ _ _ SpaceAfter=No 34 - - SYM SYM _ _ _ _ SpaceAfter=No 35 4 4 NUM CD NumType=Card _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 4412 # text = There is no detectable NF-AT protein expression in the nuclei of resting eosinophils. 1 There there PRON EX _ _ _ _ _ 2 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 no no DET DT _ _ _ _ _ 4 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 5 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 AT at PROPN NNP Number=Sing _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 13 of of SCONJ IN _ _ _ _ _ 14 resting rest VERB VBG VerbForm=Ger _ _ _ _ 15 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4413 # text = However NF-ATs appear in the nuclei of IL-4-, IL-5-, or ionomycin-stimulated eosinophils. 1 However however ADV RB _ _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 ATs ATs PROPN NNPS Number=Plur _ _ _ _ 5 appear appear VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 ionomycin- ionomycin- SYM NFP _ _ _ _ SpaceAfter=No 22 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4414 # text = Only NF-AT1 and NF-AT4, but not NF-AT2 and NF-AT3, have translocated into the nuclei in IL-4- or IL-5-stimulated eosinophils. 1 Only only ADV RB _ _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 AT1 AT1 PROPN NNP Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 AT4 AT4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 but but CCONJ CC _ _ _ _ _ 11 not not ADV RB _ _ _ _ _ 12 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 AT2 At2 NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 AT3 AT3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 translocated translocate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 into into ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 4415 # text = These findings delineate a novel pathway in the cytokine network in which Th2 lymphocytes "control" eosinophils via the release of IL-4 and IL-5, and activation of NF-AT in eosinophils. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 delineate delineate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 novel novel NOUN NN Number=Sing _ _ _ _ 6 pathway pathway NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 10 network network NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 Th2 Th2 NUM CD NumType=Card _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 15 " " PUNCT `` _ _ _ _ SpaceAfter=No 16 control control NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 " " PUNCT '' _ _ _ _ _ 18 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ _ 19 via via ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 release release NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 4 4 NUM CD NumType=Card _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 AT AT ADP IN _ _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 4416 # text = The findings also suggest that a later feedback "talking" may exist between eosinophils and Th2 lymphocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 5 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 later later ADV RB _ _ _ _ _ 8 feedback feedback ADJ JJ Degree=Pos _ _ _ _ 9 " " PUNCT `` _ _ _ _ SpaceAfter=No 10 talking talk NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 " " PUNCT '' _ _ _ _ _ 12 may may AUX MD VerbForm=Fin _ _ _ _ 13 exist exist VERB VB VerbForm=Inf _ _ _ _ 14 between between ADP IN _ _ _ _ _ 15 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 Th2 Th2 NUM CD NumType=Card _ _ _ _ 18 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4417 # text = Document 003003767 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003767 003003767 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4418 # text = Osteoclast markers accumulate on cells developing from human peripheral blood mononuclear precursors. 1 Osteoclast Osteoclast ADJ JJ Degree=Pos _ _ _ _ 2 markers marker NOUN NNS Number=Plur _ _ _ _ 3 accumulate accumulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 developing develop VERB VBG VerbForm=Ger _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 10 blood blood NOUN NN Number=Sing _ _ _ _ 11 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 12 precursors precursor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4419 # text = Recent studies show that human osteoclasts develop in vitro from hematopoietic cells; however, special cultures conditions and/or cytokine mobilized peripheral blood are apparently required. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 osteoclasts osteoclast NOUN NNS Number=Plur _ _ _ _ 7 develop develop VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 vitro vitro NOUN NN Number=Sing _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 ; ; PUNCT , _ _ _ _ _ 14 however however ADV RB _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 special special ADJ JJ Degree=Pos _ _ _ _ 17 cultures culture NOUN NNS Number=Plur _ _ _ _ 18 conditions condition NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 or or CCONJ CC _ _ _ _ _ 22 cytokine cytokine PRON PRP _ _ _ _ _ 23 mobilized mobilize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 25 blood blood NOUN NN Number=Sing _ _ _ _ 26 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 apparently apparently ADV RB _ _ _ _ _ 28 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4420 # text = Here, we report that cells expressing osteoclast markers differentiate from precursors present in nonmobilized peripheral blood mononuclear cells (PBMC), without the addition of stromal cells, growth factors, cytokines or steroids; and characterize their phenotype. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 8 osteoclast osteoclast ADJ JJ Degree=Pos _ _ _ _ 9 markers marker NOUN NNS Number=Plur _ _ _ _ 10 differentiate differentiate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 precursors precursor NOUN NNS Number=Plur _ _ _ _ 13 present present ADJ JJ Degree=Pos _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 nonmobilized nonmobilize ADJ JJ Degree=Pos _ _ _ _ 16 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 17 blood blood NOUN NN Number=Sing _ _ _ _ 18 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 PBMC PBMC NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 without without ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 addition addition NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 stromal stromal ADJ JJ Degree=Pos _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 growth growth NOUN NN Number=Sing _ _ _ _ 32 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 35 or or CCONJ CC _ _ _ _ _ 36 steroids steroid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 ; ; PUNCT , _ _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 characterize characterize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 40 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 41 phenotype phenotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 4421 # text = Three days after establishing high-density PBMC cultures (1.5 x 10(6) cells/cm2), in serum-containing medium, small adherent colonies of tartrate resistant acid phosphatase positive (TRAP+) cells emerge, amidst massive monocyte cell death. 1 Three three NUM CD NumType=Card _ _ _ _ 2 days day NOUN NNS Number=Plur _ _ _ _ 3 after after SCONJ IN _ _ _ _ _ 4 establishing establish VERB VBG VerbForm=Ger _ _ _ _ 5 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 density density NOUN NN Number=Sing _ _ _ _ 8 PBMC Pbmc NOUN NN Number=Sing _ _ _ _ 9 cultures culture NOUN NNS Number=Plur _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 1.5 1.5 NUM CD NumType=Card _ _ _ _ 12 x x SYM SYM _ _ _ _ _ 13 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 / / PUNCT , _ _ _ _ SpaceAfter=No 19 cm2 cm2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 serum- serum- SYM NFP _ _ _ _ SpaceAfter=No 24 containing contain VERB VBG VerbForm=Ger _ _ _ _ 25 medium medium ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 small small ADJ JJ Degree=Pos _ _ _ _ 28 adherent adherent ADJ JJ Degree=Pos _ _ _ _ 29 colonies colony NOUN NNS Number=Plur _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 tartrate tartrate ADJ JJ Degree=Pos _ _ _ _ 32 resistant resistant NOUN NN Number=Sing _ _ _ _ 33 acid acid NOUN NN Number=Sing _ _ _ _ 34 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 35 positive positive ADJ JJ Degree=Pos _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 TRAP trap NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 + + SYM SYM _ _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ _ 41 emerge emerge NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 amidst amidst ADJ JJS Degree=Sup _ _ _ _ 44 massive massive ADJ JJ Degree=Pos _ _ _ _ 45 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 46 cell cell NOUN NN Number=Sing _ _ _ _ 47 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 4422 # text = These adherent cells have an eccentrically placed, round nucleus, and express low levels of TRAP and sodium fluoride-resistant- alpha-naphthyl-acetate-esterase (NaF-R-NSE). 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 adherent adherent ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 eccentrically eccentrically ADV RB _ _ _ _ _ 7 placed placed ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 round round ADJ JJ Degree=Pos _ _ _ _ 10 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 express express ADJ JJ Degree=Pos _ _ _ _ 14 low low ADJ JJ Degree=Pos _ _ _ _ 15 levels level NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 TRAP trap NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 sodium sodium NOUN NN Number=Sing _ _ _ _ 20 fluoride fluoride NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 resistant resistant NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ _ 24 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 naphthyl-acetate-esterase naphthyl-acetate-esterase NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 NaF NaF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 R R PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 NSE NSE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4423 # text = Over the next week, this cell population accumulates phenotypic markers of osteoclasts (vitronectin receptor [VR], calcitonin receptor, TRAP, cathepsin K protein, and mRNA) with increased nuclearity, covering the entire surface by 15 days. 1 Over over ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 next next ADJ JJ Degree=Pos _ _ _ _ 4 week week NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 population population NOUN NN Number=Sing _ _ _ _ 9 accumulates accumulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 phenotypic phenotypic ADJ JJ Degree=Pos _ _ _ _ 11 markers marker NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 osteoclasts osteoclast NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 vitronectin vitronectin NOUN NN Number=Sing _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ _ 17 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 VR VR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 calcitonin calcitonin ADP IN _ _ _ _ _ 22 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 TRAP trap NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 cathepsin cathepsin VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 27 K k NUM CD NumType=Card _ _ _ _ 28 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 mRNA mRNA X LS _ _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 nuclearity nuclearity NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 covering cover VERB VBG VerbForm=Ger _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 entire entire ADJ JJ Degree=Pos _ _ _ _ 40 surface surface NOUN NN Number=Sing _ _ _ _ 41 by by ADP IN _ _ _ _ _ 42 15 15 NUM CD NumType=Card _ _ _ _ 43 days day NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 4424 # text = When cultured on bone, VR+, TRAP+ cells of low multinuclearity appear and cover up to 50% of the surface. 1 When when ADV WRB PronType=Int _ _ _ _ 2 cultured culture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 on on ADP IN _ _ _ _ _ 4 bone bone NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 VR VR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 + + SYM SYM _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 TRAP trap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 + + SYM SYM _ _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 low low ADJ JJ Degree=Pos _ _ _ _ 14 multinuclearity multinuclearity NOUN NN Number=Sing _ _ _ _ 15 appear appear NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 cover cover VERB VB VerbForm=Inf _ _ _ _ 18 up up ADP RP _ _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 % % SYM NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 surface surface NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4425 # text = Resorption lacunae can be observed by day 22. 1 Resorption Resorption NOUN NN Number=Sing _ _ _ _ 2 lacunae lacuna NOUN NN Number=Sing _ _ _ _ 3 can can AUX MD VerbForm=Fin _ _ _ _ 4 be be AUX VB VerbForm=Inf _ _ _ _ 5 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 day day NOUN NN Number=Sing _ _ _ _ 8 22 22 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 4426 # text = Although these pits are not nearly as numerous as the cells of preosteoclast phenotype, they do represent the activity of a subset of osteoclast-like cells that has achieved osteoclastic maturity under these culture conditions. 1 Although although SCONJ IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 pits pit NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 nearly nearly ADV RB _ _ _ _ _ 7 as as ADV RB _ _ _ _ _ 8 numerous numerous ADJ JJ Degree=Pos _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 preosteoclast preosteoclast ADJ JJ Degree=Pos _ _ _ _ 14 phenotype phenotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 17 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 represent represent VERB VB VerbForm=Inf _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 subset subset NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 osteoclast osteoclast ADV RB _ _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 like like ADJ JJ Degree=Pos _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 that that PRON WDT PronType=Rel _ _ _ _ 30 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 achieved achieve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 osteoclastic osteoclastic ADJ JJ Degree=Pos _ _ _ _ 33 maturity maturity NOUN NN Number=Sing _ _ _ _ 34 under under ADP IN _ _ _ _ _ 35 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 36 culture culture NOUN NN Number=Sing _ _ _ _ 37 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 4427 # text = Transcripts for osteoprotegerin ligand (OPGL), an osteoclast differentiation factor (also known as RANKL and TRANCE) are expressed, likely by adherent cells. 1 Transcripts transcript NOUN NNS Number=Plur _ _ _ _ 2 for for ADP IN _ _ _ _ _ 3 osteoprotegerin osteoprotegerin ADJ JJ Degree=Pos _ _ _ _ 4 ligand ligand NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 OPGL OPGL INTJ UH _ _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 osteoclast osteoclast ADJ JJ Degree=Pos _ _ _ _ 11 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 also also ADV RB _ _ _ _ _ 15 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 RANKL Rankl PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 TRANCE Trance PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 expressed express ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 likely likely ADJ JJ Degree=Pos _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 adherent adherent ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4428 # text = Thus, an adherent population of cells, with preosteoclast/osteoclast phenotypic properties, arises selectively under simple culture conditions from normal PBMC. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 adherent adherent ADJ JJ Degree=Pos _ _ _ _ 5 population population NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 preosteoclast preosteoclast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 osteoclast osteoclast ADJ JJ Degree=Pos _ _ _ _ 13 phenotypic phenotypic NOUN NN Number=Sing _ _ _ _ 14 properties property NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 arises arise NOUN NNS Number=Plur _ _ _ _ 17 selectively selectively ADV RB _ _ _ _ _ 18 under under ADP IN _ _ _ _ _ 19 simple simple ADJ JJ Degree=Pos _ _ _ _ 20 culture culture NOUN NN Number=Sing _ _ _ _ 21 conditions condition NOUN NNS Number=Plur _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 normal normal ADJ JJ Degree=Pos _ _ _ _ 24 PBMC Pbmc NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4429 # text = Further characterization of these cells should identify factors involved in the growth, terminal differentiation and activation of osteoclasts. 1 Further further ADJ JJ Degree=Pos _ _ _ _ 2 characterization characterization NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 should should AUX MD VerbForm=Fin _ _ _ _ 7 identify identify VERB VB VerbForm=Inf _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 involved involved ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 osteoclasts osteoclast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4430 # text = Document 003003768 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003768 003003768 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4431 # text = Mutual regulation of the transcriptional activator NF-kappa B and its inhibitor, I kappa B-alpha. 1 Mutual mutual ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 6 activator activator NOUN NN Number=Sing _ _ _ _ 7 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 kappa kappa X FW Foreign=Yes _ _ _ _ 17 B- B- X GW _ _ _ _ SpaceAfter=No 18 alpha alpha X FW Foreign=Yes _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4432 # text = The NK-kappa B transcription factor complex is sequestered in the cytoplasm by the inhibitory protein I kappa B-alpha (MAD-3). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 NK Nk PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 complex complex NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 sequestered sequester VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 19 kappa kappa X GW _ _ _ _ _ 20 B- B- X GW _ _ _ _ SpaceAfter=No 21 alpha alpha X GW _ _ _ _ _ 22 ( ( X GW _ _ _ _ SpaceAfter=No 23 MAD mad NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4433 # text = Various cellular stimuli relieve this inhibition by mechanisms largely unknown, leading to NF-kappa B nuclear localization and transactivation of its target genes. 1 Various various ADJ JJ Degree=Pos _ _ _ _ 2 cellular celular ADJ JJ Degree=Pos _ _ _ _ 3 stimuli stimuli NOUN NNS Number=Plur _ _ _ _ 4 relieve relieve VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 9 largely largely ADV RB _ _ _ _ _ 10 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 leading lead VERB VBG VerbForm=Ger _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa PROPN NNP Number=Sing _ _ _ _ 17 B b PROPN NNP Number=Sing _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 localization localization NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 target target NOUN NN Number=Sing _ _ _ _ 25 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4434 # text = It is demonstrated here with human T lymphocytes and monocytes that different stimuli, including tumor necrosis factor alpha and phorbol 12-myristate 13-acetate, cause rapid degradation of I kappa B-alpha, with concomitant activation of NF-kappa B, followed by a dramatic increase in 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 here here ADV RB PronType=Dem _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 T T PROPN NNP Number=Sing _ _ _ _ 8 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 different different ADJ JJ Degree=Pos _ _ _ _ 13 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 including include VERB VBG VerbForm=Ger _ _ _ _ 16 tumor tumor NOUN NN Number=Sing _ _ _ _ 17 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 alpha alpha NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 22 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT : _ _ _ _ SpaceAfter=No 24 myristate myristate NOUN NN Number=Sing _ _ _ _ 25 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - PUNCT : _ _ _ _ SpaceAfter=No 27 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 cause cause SCONJ IN _ _ _ _ _ 30 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 31 degradation degradation NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 34 kappa kappa NOUN NN Number=Sing _ _ _ _ 35 B- B- PUNCT , _ _ _ _ SpaceAfter=No 36 alpha alpha INTJ UH _ _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 with with ADP IN _ _ _ _ _ 39 concomitant concomitant ADJ JJ Degree=Pos _ _ _ _ 40 activation activation NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 kappa kappa NOUN NN Number=Sing _ _ _ _ 45 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 48 by by ADP IN _ _ _ _ _ 49 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 50 dramatic dramatic ADJ JJ Degree=Pos _ _ _ _ 51 increase increase NOUN NN Number=Sing _ _ _ _ 52 in in ADP IN _ _ _ _ _ # sent_id = 4435 # text = I kappa B-alpha mRNA and protein synthesis. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa X FW Foreign=Yes _ _ _ _ 3 B- B- X GW _ _ _ _ SpaceAfter=No 4 alpha alpha X FW Foreign=Yes _ _ _ _ 5 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 4436 # text = Transfection studies reveal that the I kappa B-alpha mRNA and the encoded protein are potently induced by NF-kappa B and by homodimers of p65 and of c-Rel. 1 Transfection Transfection NOUN NN Number=Sing _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 reveal reveal ADJ JJ Degree=Pos _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 kappa kappa X FW Foreign=Yes _ _ _ _ 8 B- B- X GW _ _ _ _ SpaceAfter=No 9 alpha alpha X FW Foreign=Yes _ _ _ _ 10 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 encoded encod ADJ JJ Degree=Pos _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 potently potently ADV RB _ _ _ _ _ 17 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa PROPN NNP Number=Sing _ _ _ _ 22 B b PROPN NNP Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 homodimers homodimer NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 p65 p65 NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4437 # text = We propose a model in which NF-kappa B and I kappa B-alpha mutually regulate each other in a cycle: saturating amounts of the inhibitory I kappa B-alpha protein are destroyed upon stimulation, allowing rapid activation of NF-kappa B. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 model model NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B b PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 13 kappa kappa X GW _ _ _ _ _ 14 B- B- X GW _ _ _ _ SpaceAfter=No 15 alpha alpha X GW _ _ _ _ _ 16 mutually mutually ADV RB _ _ _ _ _ 17 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 18 each each DET DT _ _ _ _ _ 19 other other ADJ JJ Degree=Pos _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 : : PUNCT : _ _ _ _ _ 24 saturating saturat VERB VBG VerbForm=Ger _ _ _ _ 25 amounts amount NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 29 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 30 kappa kappa X GW _ _ _ _ _ 31 B- B- X GW _ _ _ _ SpaceAfter=No 32 alpha alpha X GW _ _ _ _ _ 33 protein protein NOUN NN Number=Sing _ _ _ _ 34 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 destroyed destroy VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 upon upon ADP IN _ _ _ _ _ 37 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 allowing allow VERB VBG VerbForm=Ger _ _ _ _ 40 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 41 activation activation NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 kappa kappa PROPN NNP Number=Sing _ _ _ _ 46 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 4438 # text = Subsequently, I kappa B-alpha mRNA and protein levels are quickly induced by the activated NF-kappa B. 1 Subsequently subsequently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 4 kappa kappa X FW Foreign=Yes _ _ _ _ 5 B- B- X GW _ _ _ _ SpaceAfter=No 6 alpha alpha X FW Foreign=Yes _ _ _ _ 7 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 levels level NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 quickly quickly ADV RB _ _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4439 # text = This resurgence of I kappa B-alpha protein acts to restore an equilibrium in which NF-kappa B is again inhibited. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 resurgence resurgence NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 5 kappa kappa X FW Foreign=Yes _ _ _ _ 6 B- B- X GW _ _ _ _ SpaceAfter=No 7 alpha alpha X FW Foreign=Yes _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 restore restore VERB VB VerbForm=Inf _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 equilibrium equilibrium NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 again again ADV RB _ _ _ _ _ 22 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4440 # text = Document 003003773 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003773 003003773 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4441 # text = Disruption of a GATA motif in the Duffy gene promoter abolishes erythroid gene expression in Duffy-negative individuals. 1 Disruption disruption NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 GATA GATA PROPN NNP Number=Sing _ _ _ _ 5 motif motif NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 Duffy Duffy PROPN NNP Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 abolishes abolish VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 Duffy Duffy PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 negative negative ADJ JJ Degree=Pos _ _ _ _ 19 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4442 # text = The mRNA for the Duffy blood group antigen, the erythrocyte receptor for the Plasmodium vivax malaria parasite, has recently been cloned and shown to encode a widely expressed chemokine receptor. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 Duffy Duffy PROPN NNP Number=Sing _ _ _ _ 6 blood blood NOUN NN Number=Sing _ _ _ _ 7 group group NOUN NN Number=Sing _ _ _ _ 8 antigen antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 erythrocyte erythrocyte ADJ JJ Degree=Pos _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 Plasmodium Plasmodium PROPN NNP Number=Sing _ _ _ _ 16 vivax vivax NOUN NN Number=Sing _ _ _ _ 17 malaria malaria NOUN NN Number=Sing _ _ _ _ 18 parasite parasite NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 recently recently ADV RB _ _ _ _ _ 22 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 23 cloned clon VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 encode encode VERB VB VerbForm=Inf _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 widely widely ADV RB _ _ _ _ _ 30 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 chemokine chemokine NOUN NN Number=Sing _ _ _ _ 32 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4443 # text = Here, we show that the Duffy antigen/chemokine receptor gene (DARC) is composed of a single exon and that most Duffy-negative blacks carry a silent FY*B allele with a single T to C substitution at nucleotide -46. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 Duffy Duffy PROPN NNP Number=Sing _ _ _ _ 8 antigen antigen NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 10 chemokine chemokine NOUN NN Number=Sing _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 DARC DARC NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 single single ADJ JJ Degree=Pos _ _ _ _ 21 exon exon NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 most most ADV RBS _ _ _ _ _ 25 Duffy Duffy PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 negative negative ADJ JJ Degree=Pos _ _ _ _ 28 blacks black NOUN NNS Number=Plur _ _ _ _ 29 carry carry VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 silent silent ADJ JJ Degree=Pos _ _ _ _ 32 FY Fy NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 *B *b NOUN NN Number=Sing _ _ _ _ 34 allele allele NOUN NN Number=Sing _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 single single ADJ JJ Degree=Pos _ _ _ _ 38 T t PROPN NNP Number=Sing _ _ _ _ 39 to to ADP IN _ _ _ _ _ 40 C C PROPN NNP Number=Sing _ _ _ _ 41 substitution substitution NOUN NN Number=Sing _ _ _ _ 42 at at ADP IN _ _ _ _ _ 43 nucleotide nucleotide NOUN NN Number=Sing _ _ _ _ 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 46 46 NUM CD NumType=Card _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 4444 # text = This mutation impairs the promoter activity in erythroid cells by disrupting a binding site for the GATA1 erythroid transcription factor. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 mutation mutation NOUN NN Number=Sing _ _ _ _ 3 impairs impair VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 by by SCONJ IN _ _ _ _ _ 11 disrupting disrupt VERB VBG VerbForm=Ger _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 binding binding VERB VBG VerbForm=Ger _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 GATA1 GATA1 PROPN NNP Number=Sing _ _ _ _ 18 erythroid erythroid NOUN NN Number=Sing _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4445 # text = With the recent characterization of the FY*A and FY*B alleles, these findings provide the molecular basis of the Duffy blood group system and an explanation for the erythroid-specific repression of the DARC gene in Duffy-negative individuals. 1 With with SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 recent recent ADJ JJ Degree=Pos _ _ _ _ 4 characterization characterization NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 FY FY PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 *A *A PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 FY FY PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 *B *B PROPN NNP Number=Sing _ _ _ _ 12 alleles allele NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 15 findings finding NOUN NNS Number=Plur _ _ _ _ 16 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 19 basis basis NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 Duffy Duffy PROPN NNP Number=Sing _ _ _ _ 23 blood blood NOUN NN Number=Sing _ _ _ _ 24 group group NOUN NN Number=Sing _ _ _ _ 25 system system NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 explanation explanation NOUN NN Number=Sing _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 32 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 33 repression repression NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 DARC Darc PROPN NNP Number=Sing _ _ _ _ 37 gene gene NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 Duffy Duffy PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 negative negative ADJ JJ Degree=Pos _ _ _ _ 42 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4446 # text = Document 003003776 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003776 003003776 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4447 # text = The c-rel protooncogene product represses NF-kappa B p65-mediated transcriptional activation of the long terminal repeat of type 1 human immunodeficiency virus. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 c- c- SYM NFP _ _ _ _ SpaceAfter=No 3 rel rel NOUN NN Number=Sing _ _ _ _ 4 protooncogene protooncogene NOUN NN Number=Sing _ _ _ _ 5 product product NOUN NN Number=Sing _ _ _ _ 6 represses represse VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B b PROPN NNP Number=Sing _ _ _ _ 11 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 -mediated -mediated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 long long ADJ JJ Degree=Pos _ _ _ _ 18 terminal terminal NOUN NN Number=Sing _ _ _ _ 19 repeat repeat NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 type type NOUN NN Number=Sing _ _ _ _ 22 1 1 NUM CD NumType=Card _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 25 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4448 # text = The long terminal repeat (LTR) of the type 1 human immunodeficiency virus (HIV-1) and the 5' regulatory region of the gene encoding the interleukin 2 receptor alpha subunit (IL-2R alpha) share functional kappa 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 long long ADJ JJ Degree=Pos _ _ _ _ 3 terminal terminal NOUN NN Number=Sing _ _ _ _ 4 repeat repeat NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 type type NOUN NN Number=Sing _ _ _ _ 11 1 1 NUM CD NumType=Card _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 14 virus virus NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 X LS _ _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ' ' PUNCT `` _ _ _ _ _ 24 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 25 region region NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 32 2 2 NUM CD NumType=Card _ _ _ _ 33 receptor receptor NOUN NN Number=Sing _ _ _ _ 34 alpha alpha NOUN NN Number=Sing _ _ _ _ 35 subunit subunit NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 2R 2r NOUN NN Number=Sing _ _ _ _ 40 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 share share NOUN NN Number=Sing _ _ _ _ 43 functional functional ADJ JJ Degree=Pos _ _ _ _ 44 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 4449 # text = B enhancer elements involved in the regulation of these inducible transcription units during T-cell activation. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 3 elements element NOUN NNS Number=Plur _ _ _ _ 4 involved involve ADJ JJ Degree=Pos _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 regulation regulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 10 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 units unit NOUN NNS Number=Plur _ _ _ _ 13 during during ADP IN _ _ _ _ _ 14 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4450 # text = These kappa B enhancer elements are recognized by a structurally related family of interactive proteins that includes p50, p65, and the product of the c-rel protooncogene (c-Rel). 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 kappa kappa NOUN NN Number=Sing _ _ _ _ 3 B b NOUN NN Number=Sing _ _ _ _ 4 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 5 elements element NOUN NNS Number=Plur _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 recognized recognize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 structurally structurally ADV RB _ _ _ _ _ 11 related related ADJ JJ Degree=Pos _ _ _ _ 12 family family NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 interactive interactive ADJ JJ Degree=Pos _ _ _ _ 15 proteins protein NOUN NNS Number=Plur _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 includes include VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 product product NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 c- c- SYM NFP _ _ _ _ SpaceAfter=No 28 rel rel NOUN NN Number=Sing _ _ _ _ 29 protooncogene protooncogene NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4451 # text = Recent biochemical studies have shown that p65 and p50 form the prototypical NF-kappa B complex, which is rapidly translocated from the cytoplasm to the nucleus during T-cell activation. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 p65 p65 NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 p50 p50 NUM CD NumType=Card _ _ _ _ 10 form from NOUN NN Number=Sing _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 prototypical prototypical ADJ JJ Degree=Pos _ _ _ _ 13 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 rapidly rapidly ADV RB _ _ _ _ _ 22 translocated translocate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 29 during during ADP IN _ _ _ _ _ 30 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4452 # text = This intracellular signaling complex potently stimulates kappa B-directed transcription from either the HIV-1 LTR or the IL-2R alpha promoter via the strong transactivation domain present in p65. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 3 signaling signaling NOUN NN Number=Sing _ _ _ _ 4 complex complex NOUN NN Number=Sing _ _ _ _ 5 potently potently ADV RB _ _ _ _ _ 6 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 either either CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 LTR Ltr NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2R 2r PROPN NNP Number=Sing _ _ _ _ 24 alpha alpha NOUN NN Number=Sing _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ _ 26 via via ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 strong strong ADJ JJ Degree=Pos _ _ _ _ 29 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 30 domain domain NOUN NN Number=Sing _ _ _ _ 31 present present ADJ JJ Degree=Pos _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4453 # text = We now demonstrate that nuclear expression of human c-Rel, which is induced by either phorbol ester or tumor necrosis factor alpha with delayed kinetics relative to p65, markedly represses p65-mediated activation of these transcription units. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 now now ADV RB _ _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 c- c- SYM NFP _ _ _ _ SpaceAfter=No 10 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 either either DET DT _ _ _ _ _ 17 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 18 ester ester NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 tumor tumor NOUN NN Number=Sing _ _ _ _ 21 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 delayed delay ADJ JJ Degree=Pos _ _ _ _ 26 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 27 relative relative ADV RB _ _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 markedly markedly ADV RB _ _ _ _ _ 32 represses repress VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 -mediated -mediated ADJ JJ Degree=Pos _ _ _ _ 35 activation activation NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 38 transcription transcription NOUN NN Number=Sing _ _ _ _ 39 units unit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 4454 # text = These inhibitory effects of c-Rel correlate with its DNA-binding activity but not with its ability to heterodimerize with p50, suggesting that c-Rel inhibition involves competition with p50/p65 for occupancy of the kappa B enhancer element. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 3 effects effect NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 Rel Rel NOUN NN Number=Sing _ _ _ _ 8 correlate correlate NOUN NN Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 11 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 binding binding VERB VBG VerbForm=Ger _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 not not ADV RB _ _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 ability ability NOUN NN Number=Sing _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 heterodimerize heterodimerize VERB VB VerbForm=Inf _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 Rel Rel NOUN NN Number=Sing _ _ _ _ 30 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 31 involves involves NOUN NNS Number=Plur _ _ _ _ 32 competition competition NOUN NN Number=Sing _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 / / PUNCT , _ _ _ _ SpaceAfter=No 36 p65 p65 NOUN NN Number=Sing _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 occupancy occupancy NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 kappa kappa PROPN NNP Number=Sing _ _ _ _ 42 B b PROPN NNP Number=Sing _ _ _ _ 43 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 44 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 4455 # text = Together, these findings suggest that one function of c-Rel is as a physiologic repressor of the HIV-1 LTR and IL-2R alpha promoters, serving to efficiently counter the strong transcriptional activating effects of p65. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 findings finding NOUN NNS Number=Plur _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 one one NUM CD NumType=Card _ _ _ _ 8 function function NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 Rel Rel NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 physiologic physiologic NOUN NN Number=Sing _ _ _ _ 17 repressor repressor NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 LTR Ltr NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2R 2r NOUN NN Number=Sing _ _ _ _ 28 alpha alpha NOUN NN Number=Sing _ _ _ _ 29 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 serving serve VERB VBG VerbForm=Ger _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 efficiently efficiently ADV RB _ _ _ _ _ 34 counter counter X AFX _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 strong strong ADJ JJ Degree=Pos _ _ _ _ 37 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 38 activating activat NOUN NN Number=Sing _ _ _ _ 39 effects effect NOUN NNS Number=Plur _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4456 # text = Document 003003779 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003003779 003003779 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4457 # text = Activation of human immunodeficiency virus type 1 expression by Gardnerella vaginalis. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 type type NOUN NN Number=Sing _ _ _ _ 7 1 1 NUM CD NumType=Card _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 Gardnerella Gardnerella PROPN NNP Number=Sing _ _ _ _ 11 vaginalis vaginalis PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4458 # text = Bacterial vaginosis (BV) is associated with an increased rate of sexual transmission of human immunodeficiency virus (HIV) type 1, and Gardnerella vaginalis is frequently isolated from the genital tracts of women with BV. 1 Bacterial Bacterial ADJ JJ Degree=Pos _ _ _ _ 2 vaginosis vaginosis NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 BV BV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 rate rate NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 sexual sexual ADJ JJ Degree=Pos _ _ _ _ 14 transmission transmission NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 18 virus virus NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 type type NOUN NN Number=Sing _ _ _ _ 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 Gardnerella Gardnerella PROPN NNP Number=Sing _ _ _ _ 27 vaginalis vaginalis PROPN NNP Number=Sing _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 frequently frequently ADV RB _ _ _ _ _ 30 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 from from ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 genital genital ADJ JJ Degree=Pos _ _ _ _ 34 tracts tract NOUN NNS Number=Plur _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 women woman NOUN NNS Number=Plur _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 BV BV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 4459 # text = G. vaginalis lysates were found to significantly stimulate HIV expression in monocytoid cells. 1 G. g. PROPN NNP Number=Sing _ _ _ _ 2 vaginalis vaginalis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 lysates lysate NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 significantly significantly ADV RB _ _ _ _ _ 8 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 9 HIV HIV PROPN NNP Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 monocytoid monocytoid ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 4460 # text = Stimulation was significantly higher when lysates were heated at 100 degrees C for 5 min but was reduced by treatment with lysozyme or protease. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 significantly significantly ADV RB _ _ _ _ _ 4 higher higher ADV RBR Degree=Cmp _ _ _ _ 5 when when ADV WRB PronType=Int _ _ _ _ 6 lysates lysate NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 heated heat VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 at at ADP IN _ _ _ _ _ 10 100 100 NUM CD NumType=Card _ _ _ _ 11 degrees degree NOUN NNS Number=Plur _ _ _ _ 12 C C PROPN NNP Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 5 5 NUM CD NumType=Card _ _ _ _ 15 min min NOUN NNS Number=Plur _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 treatment treatment NOUN NN Number=Sing _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 lysozyme lysozyme NOUN NN Number=Sing _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 protease protease NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4461 # text = G. vaginalis lysates also activated HIV expression in certain T cell lines. 1 G. g. PROPN NNP Number=Sing _ _ _ _ 2 vaginalis vaginalis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 lysates lysate NOUN NNS Number=Plur _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 HIV HIV PROPN NNP Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 certain certain ADJ JJ Degree=Pos _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 4462 # text = G. vaginalis lysates activated HIV long-terminal repeat transcription in HIV-infected cells and increased NF-kappaB binding activity, indicating an effect by G. vaginalis on HIV transcription. 1 G. G. PROPN NNP Number=Sing _ _ _ _ 2 vaginalis vaginalis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 lysates lysate NOUN NNS Number=Plur _ _ _ _ 4 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 HIV HIV PROPN NNP Number=Sing _ _ _ _ 6 long long ADV RB Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 9 repeat repeat NOUN NN Number=Sing _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 HIV- HIV- SYM NFP _ _ _ _ SpaceAfter=No 13 infected infect ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 20 binding bind VERB VBG VerbForm=Ger _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 effect effect NOUN NN Number=Sing _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 G. G. PROPN NNP Number=Sing _ _ _ _ 28 vaginalis vaginalis PROPN NNP Number=Sing _ _ _ _ 29 on on ADP IN _ _ _ _ _ 30 HIV HIV PROPN NNP Number=Sing _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4463 # text = The activation of HIV production by G. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 HIV HIV PROPN NNP Number=Sing _ _ _ _ 5 production production NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 G. G. PROPN NNP Number=Sing _ _ _ _ # sent_id = 4464 # text = vaginalis suggests that genital tract infection with G. vaginalis increases the risk of HIV transmission by increasing HIV expression in the genital tract. 1 vaginalis vaginalis PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 genital genital ADJ JJ Degree=Pos _ _ _ _ 5 tract tract NOUN NN Number=Sing _ _ _ _ 6 infection infection NOUN NN Number=Sing _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 G. G. PROPN NNP Number=Sing _ _ _ _ 9 vaginalis vaginalis PRON DT Number=Sing|PronType=Dem _ _ _ _ 10 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 risk risk NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 HIV HIV PROPN NNP Number=Sing _ _ _ _ 15 transmission transmission NOUN NN Number=Sing _ _ _ _ 16 by by SCONJ IN _ _ _ _ _ 17 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 18 HIV Hiv PROPN NNP Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 genital genital ADJ JJ Degree=Pos _ _ _ _ 23 tract tract NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4465 # text = This may explain, at least in part, the increased rate of HIV transmission in women with BV. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 may may AUX MD VerbForm=Fin _ _ _ _ 3 explain explain VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 at at ADV RB _ _ _ _ _ 6 least least ADV RBS Degree=Sup _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 part part NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 rate rate NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 HIV HIV PROPN NNP Number=Sing _ _ _ _ 15 transmission transmission NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 women woman NOUN NNS Number=Plur _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 BV BV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4466 # text = Document 0030013 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013 0030013 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4467 # text = Transcriptional targeting of retroviral vectors to the erythroblastic progeny of transduced hematopoietic stem cells. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 targeting targeting NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 retroviral retroviral ADJ JJ Degree=Pos _ _ _ _ 5 vectors vector NOUN NNS Number=Plur _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 erythroblastic erythroblastic ADJ JJ Degree=Pos _ _ _ _ 9 progeny progeny NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 transduced transduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 13 stem stem NOUN NN Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4468 # text = Targeted expression to specific tissues or cell lineages is a necessary feature of a gene therapy vector for many clinical applications, such as correction of hemoglobinopathies or thalassemias by transplantation of genetically modified hematopoietic stem cells. 1 Targeted target VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 tissues tissue NOUN NNS Number=Plur _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 lineages lineage NOUN NNS Number=Plur _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 12 feature feature NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 therapy therapy NOUN NN Number=Sing _ _ _ _ 17 vector vector NOUN NN Number=Sing _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 many many ADJ JJ Degree=Pos _ _ _ _ 20 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 21 applications application NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 such such ADJ JJ Degree=Pos _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 correction correction NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 hemoglobinopathies hemoglobinopathy NOUN NNS Number=Plur _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 thalassemias thalassemia NOUN NNS Number=Plur _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 transplantation transplantation NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 genetically genetically ADV RB _ _ _ _ _ 34 modified modify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 36 stem stem NOUN NN Number=Sing _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 4469 # text = We developed retroviral vectors in which the constitutive viral enhancer in the U3 region of the 3' LTR is replaced by an autoregulatory enhancer of the erythroid-specific GATA-1 transcription factor gene. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 developed develop VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 retroviral retroviral ADJ JJ Degree=Pos _ _ _ _ 4 vectors vector NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 9 viral viral ADJ JJ Degree=Pos _ _ _ _ 10 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 U3 U3 NUM CD NumType=Card _ _ _ _ 14 region region NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ' ' PUNCT `` _ _ _ _ _ 19 LTR LTR NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 replaced replace VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 autoregulatory autoregulatory ADJ JJ Degree=Pos _ _ _ _ 25 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 specific specific ADJ JJ Degree=Pos _ _ _ _ 31 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ _ 36 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 4470 # text = The replaced enhancer is propagated to the 5' LTR upon integration into the target cell genome. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 replaced replace VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 propagated propagate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ' ' PUNCT `` _ _ _ _ _ 10 LTR Ltr NOUN NN Number=Sing _ _ _ _ 11 upon upon ADP IN _ _ _ _ _ 12 integration integration NOUN NN Number=Sing _ _ _ _ 13 into into ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 target target NOUN NN Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 genome genome NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4471 # text = The modified vectors were used to transduce human hematopoietic cell lines, cord blood-derived CD34(+) stem/progenitor cells, and murine bone marrow repopulating stem cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 modified modified ADJ JJ Degree=Pos _ _ _ _ 3 vectors vector NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 transduce transduce VERB VB VerbForm=Inf _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 cord cord NOUN NN Number=Sing _ _ _ _ 14 blood blood NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 CD34 Cd34 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 +) +) SYM NFP _ _ _ _ _ 20 stem stem NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 murine murine ADJ JJ Degree=Pos _ _ _ _ 27 bone bone NOUN NN Number=Sing _ _ _ _ 28 marrow marrow NOUN NN Number=Sing _ _ _ _ 29 repopulating repopulat VERB VBG VerbForm=Ger _ _ _ _ 30 stem stem NOUN NN Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4472 # text = The expression of appropriate reporter genes (triangle upLNGFR, EGFP) was analyzed in the differentiated progeny of transduced stem cells in vitro, in liquid culture as well as in clonogenic assay, and in vivo, after bone marrow transplantation in lethally irradiated mice. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 appropriate appropriate ADJ JJ Degree=Pos _ _ _ _ 5 reporter reporter NOUN NN Number=Sing _ _ _ _ 6 genes gene NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 triangle triangle NOUN NN Number=Sing _ _ _ _ 9 upLNGFR upLNGFR NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 EGFP EGFP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 progeny progeny NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 transduced transduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 stem stem NOUN NN Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 vitro vitro PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 liquid liquid ADJ JJ Degree=Pos _ _ _ _ 28 culture culture NOUN NN Number=Sing _ _ _ _ 29 as as ADV RB _ _ _ _ _ 30 well well ADV RB Degree=Pos _ _ _ _ 31 as as ADP IN _ _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 clonogenic clonogenic ADJ JJ Degree=Pos _ _ _ _ 34 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 after after ADP IN _ _ _ _ _ 41 bone bone NOUN NN Number=Sing _ _ _ _ 42 marrow marrow NOUN NN Number=Sing _ _ _ _ 43 transplantation transplantation NOUN NN Number=Sing _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 lethally lethally ADV RB _ _ _ _ _ 46 irradiated irradiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 4473 # text = The GATA-1 autoregulatory enhancer effectively restricts the expression of the LTR-driven proviral transcription unit to the erythroblastic progeny of both human progenitors and mouse-repopulating stem cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 autoregulatory autoregulatory NOUN NN Number=Sing _ _ _ _ 6 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 7 effectively effectively ADV RB _ _ _ _ _ 8 restricts restrict VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 proviral proviral ADJ JJ Degree=Pos _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 unit unit NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 erythroblastic erythroblastic ADJ JJ Degree=Pos _ _ _ _ 22 progeny progeny NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 both both DET DT _ _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 progenitors progenitor NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 mouse mouse NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 repopulating repopulating VERB VBG VerbForm=Ger _ _ _ _ 31 stem stem NOUN NN Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4474 # text = Packaging of viral particles, integration into the target genome, and stability of the integrated provirus are not affected by the LTR modification. 1 Packaging Packaging VERB VBG VerbForm=Ger _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 viral viral ADJ JJ Degree=Pos _ _ _ _ 4 particles particle NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 integration integration NOUN NN Number=Sing _ _ _ _ 7 into into ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 target target NOUN NN Number=Sing _ _ _ _ 10 genome genome NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 stability stability NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 integrated integrate ADJ JJ Degree=Pos _ _ _ _ 17 provirus provirus NOUN NN Number=Sing _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 LTR Ltr PROPN NNP Number=Sing _ _ _ _ 24 modification modification NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4475 # text = Enhancer replacement is therefore an effective strategy to target expression of a retroviral transgene to a specific progeny of transduced hematopoietic stem cells. 1 Enhancer Enhancer NOUN NN Number=Sing _ _ _ _ 2 replacement replacement NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 therefore therefore ADV RB _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 effective effective ADJ JJ Degree=Pos _ _ _ _ 7 strategy strategy NOUN NN Number=Sing _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 target target VERB VB VerbForm=Inf _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 retroviral retroviral ADJ JJ Degree=Pos _ _ _ _ 14 transgene transgene NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 progeny progeny NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 transduced transduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 22 stem stem NOUN NN Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4476 # text = Document 00300110 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300110 00300110 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4477 # text = Four P-like elements are required for optimal transcription of the mouse IL-4 gene: involvement of a distinct set of nuclear factor of activated T cells and activator protein-1 family proteins. 1 Four four NUM CD NumType=Card _ _ _ _ 2 P- P- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 like like ADP IN _ _ _ _ _ 4 elements element NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 mouse mouse NOUN NN Number=Sing _ _ _ _ 13 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 4 4 NUM CD NumType=Card _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 : : PUNCT : _ _ _ _ _ 18 involvement involvement NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 22 set set NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 activator activator NOUN NN Number=Sing _ _ _ _ 32 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ _ 35 family family NOUN NN Number=Sing _ _ _ _ 36 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4478 # text = We previously identified the P sequence as a critical regulatory element of the human IL-4 promoter. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 previously previously ADV RB _ _ _ _ _ 3 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 P p NOUN NN Number=Sing _ _ _ _ 6 sequence sequence NOUN NN Number=Sing _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 critical critical ADJ JJ Degree=Pos _ _ _ _ 10 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 11 element element NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 4 4 NUM CD NumType=Card _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 4479 # text = In the mouse IL-4 promoter, there are five elements homologous to the human P sequence designated conserved lymphokine element 0 (CLE0), P, P2, P3 and P4. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 mouse mouse NOUN NN Number=Sing _ _ _ _ 4 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 4 4 NUM CD NumType=Card _ _ _ _ 7 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 there there PRON EX _ _ _ _ _ 10 are be VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 five five NUM CD NumType=Card _ _ _ _ 12 elements element NOUN NNS Number=Plur _ _ _ _ 13 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 P p NOUN NN Number=Sing _ _ _ _ 18 sequence sequence NOUN NN Number=Sing _ _ _ _ 19 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 22 element element NOUN NN Number=Sing _ _ _ _ 23 0 0 NUM CD NumType=Card _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 CLE0 CLE0 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 P P NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 P2 p2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 P3 P3 NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 P4 p4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4480 # text = To characterize the role of these P-like elements and their binding factors in the native promoter, we did transient transfection and electrophoretic mobility shift assays (EMSA). 1 To to PART TO _ _ _ _ _ 2 characterize characterize VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 P- P- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 like like ADP IN _ _ _ _ _ 9 elements element NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 factors factor NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 native native ADJ JJ Degree=Pos _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 20 did do VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 transient transient ADJ JJ Degree=Pos _ _ _ _ 22 transfection transfection NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 25 mobility mobility NOUN NN Number=Sing _ _ _ _ 26 shift shift NOUN NN Number=Sing _ _ _ _ 27 assays assay NOUN NNS Number=Plur _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 EMSA EMSA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4481 # text = Transfection of EL-4 cells with the IL-4 promoter-reporter constructs carrying mutated P-like elements showed that four P-like elements, CLE0, P, P2 and P4, but not P3, were required for optimal activation of the IL-4 promoter. 1 Transfection Transfection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 EL EL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 4 4 NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 4 4 NUM CD NumType=Card _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 reporter reporter NOUN NN Number=Sing _ _ _ _ 15 constructs construct NOUN NNS Number=Plur _ _ _ _ 16 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 17 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 P- p- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 like like ADP IN _ _ _ _ _ 20 elements element NOUN NNS Number=Plur _ _ _ _ 21 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 that that SCONJ IN _ _ _ _ _ 23 four four NUM CD NumType=Card _ _ _ _ 24 P p NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 like like ADJ JJ Degree=Pos _ _ _ _ 27 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 CLE0 CLE0 NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 P P NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 P2 P2 NUM CD NumType=Card _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 P4 P4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 but but CCONJ CC _ _ _ _ _ 38 not not ADV RB _ _ _ _ _ 39 P3 P3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 42 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 43 for for ADP IN _ _ _ _ _ 44 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 45 activation activation NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 4 4 NUM CD NumType=Card _ _ _ _ 51 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 4482 # text = EMSA showed that both constitutive and inducible complexes bound to CLE0, P, P2 and P4, whereas only a constitutive complex bound to P3. 1 EMSA EMSA PROPN NNP Number=Sing _ _ _ _ 2 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 both both DET DT _ _ _ _ _ 5 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 8 complexes complexe NOUN NNS Number=Plur _ _ _ _ 9 bound bound ADJ JJ Degree=Pos _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 CLE0 CLE0 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 P P NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 P2 P2 NUM CD NumType=Card _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 P4 P4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 whereas whereas SCONJ IN _ _ _ _ _ 20 only only ADV RB _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 23 complex complex NOUN NN Number=Sing _ _ _ _ 24 bound bound ADJ JJ Degree=Pos _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 P3 P3 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4483 # text = In competition and antibody supershift assays in EMSA, complexes formed with P or P2 proved to contain nuclear factor of activated T cells (NFAT) family proteins as major components. 1 In in ADP IN _ _ _ _ _ 2 competition competition NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 antibody antibody PRON NN Number=Sing _ _ _ _ 5 supershift supershift ADJ JJ Degree=Pos _ _ _ _ 6 assays assay NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 EMSA EMSA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 complexes complexe NOUN NNS Number=Plur _ _ _ _ 11 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 P p NOUN NN Number=Sing _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 P2 p2 NOUN NN Number=Sing _ _ _ _ 16 proved prove VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 contain contain VERB VB VerbForm=Inf _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 family family NOUN NN Number=Sing _ _ _ _ 29 proteins protein NOUN NNS Number=Plur _ _ _ _ 30 as as ADP IN _ _ _ _ _ 31 major major ADJ JJ Degree=Pos _ _ _ _ 32 components component NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4484 # text = Activator protein (AP)-1 family proteins interacted with CLE0, P, P2 and P4. NFAT 1 Activator Activator NOUN NN Number=Sing _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 6 - - PUNCT : _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 family family NOUN NN Number=Sing _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 interacted interact VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 CLE0 CLE0 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 P p NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 P2 p2 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 P4 p4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ 20 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No # sent_id = 4485 # text = /AP-1 complex formed only with P and P2. 1 / / PUNCT , _ _ _ _ SpaceAfter=No 2 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 complex complex NOUN NN Number=Sing _ _ _ _ 6 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 only only ADV RB _ _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 P p NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 P2 p2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 4486 # text = Cross-competition assays among the P-like elements revealed element-specific and common complexes. 1 Cross cross PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -competition -competition NOUN NN Number=Sing _ _ _ _ 3 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 among among ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 P- p- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 like like ADP IN _ _ _ _ _ 8 elements element NOUN NNS Number=Plur _ _ _ _ 9 revealed reveale VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 common common ADJ JJ Degree=Pos _ _ _ _ 15 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4487 # text = Six tandem repeats of the P element linked to the SV40 promoter responded to phorbol 12-myristate 13-acetate, while that of other elements did not. 1 Six six NUM CD NumType=Card _ _ _ _ 2 tandem tandem NOUN NN Number=Sing _ _ _ _ 3 repeats repeat NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 P P PROPN NNP Number=Sing _ _ _ _ 7 element element NOUN NN Number=Sing _ _ _ _ 8 linked link VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 SV40 SV40 PROPN NNP Number=Sing _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 responded respond VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 phorbol phorbol VERB VB VerbForm=Inf _ _ _ _ 16 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 myristate myristate NOUN NN Number=Sing _ _ _ _ 19 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT : _ _ _ _ SpaceAfter=No 21 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 while while SCONJ IN _ _ _ _ _ 24 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 other other ADJ JJ Degree=Pos _ _ _ _ 27 elements element NOUN NNS Number=Plur _ _ _ _ 28 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 not not PART RB _ _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4488 # text = It would thus appear that components of each P-like element-binding complexes are not identical and may coordinately contribute to transcriptional activity. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 would would AUX MD VerbForm=Fin _ _ _ _ 3 thus thus ADV RB _ _ _ _ _ 4 appear appear VERB VB VerbForm=Inf _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 components component NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 each each DET DT _ _ _ _ _ 9 P- p- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 like like ADP IN _ _ _ _ _ 11 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 binding binding VERB VBG VerbForm=Ger _ _ _ _ 14 complexes complex NOUN NNS Number=Plur _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 identical identical ADJ JJ Degree=Pos _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 may may AUX MD VerbForm=Fin _ _ _ _ 20 coordinately coordinately ADV RB _ _ _ _ _ 21 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4489 # text = Document 00300116 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300116 00300116 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4490 # text = HIV enhancer activity perpetuated by NF-kappa B induction on infection of monocytes [see comments] 1 HIV haHive NOUN NN Number=Sing _ _ _ _ 2 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 3 activity activity NOUN NN Number=Sing _ _ _ _ 4 perpetuated perpetuate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B b PROPN NNP Number=Sing _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 infection infection NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 15 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 see see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 comments comment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 4491 # text = Permissiveness to replication of human immunodeficiency virus (HIV) differs in T lymphocytes and macrophages. 1 Permissiveness Permissiveness NOUN NN Number=Sing _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 replication replication NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 7 virus virus NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 differs differ NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4492 # text = In T cells, HIV transcription is poorly detected in vivo. 1 In in ADP IN _ _ _ _ _ 2 T t PROPN NNP Number=Sing _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 HIV HIV PROPN NNP Number=Sing _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 poorly poorly ADV RB _ _ _ _ _ 9 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 4493 # text = Cloned, normal T lymphocytes show very little, if any, basal activity of the HIV enhancer and low nuclear expression of NF-kappa B, a potent transcriptional activator of the HIV enhancer. 1 Cloned Cloned ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 normal normal ADJ JJ Degree=Pos _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 very very ADV RB _ _ _ _ _ 8 little little ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 if if SCONJ IN _ _ _ _ _ 11 any any DET DT _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 basal basal ADJ JJ Degree=Pos _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 HIV HIV PROPN NNP Number=Sing _ _ _ _ 18 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 low low ADJ JJ Degree=Pos _ _ _ _ 21 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa PROPN NNP Number=Sing _ _ _ _ 27 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 potent potent NOUN NN Number=Sing _ _ _ _ 31 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 32 activator activator NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 HIV HIV PROPN NNP Number=Sing _ _ _ _ 36 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 4494 # text = In contrast, fixed tissue macrophages express detectable HIV proteins, indicating permanent virus transcription. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 fixed fix VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 tissue tissue NOUN NN Number=Sing _ _ _ _ 6 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 7 express express ADJ JJ Degree=Pos _ _ _ _ 8 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 9 HIV Hiv NOUN NN Number=Sing _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 13 permanent permanent ADJ JJ Degree=Pos _ _ _ _ 14 virus virus NOUN NN Number=Sing _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4495 # text = One explanation for the perpetuation of virus infection in macrophages could be sustained nuclear NF-kappa B expression. 1 One one NUM CD NumType=Card _ _ _ _ 2 explanation explanation NOUN NN Number=Sing _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 perpetuation perpetuation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 virus virus NOUN NN Number=Sing _ _ _ _ 8 infection infection NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 11 could could AUX MD VerbForm=Fin _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 sustained sustain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4496 # text = However, the U937 monocytic cell line, which is fully permissive to HIV replication, is known to express only low levels of nuclear NF-kappa B. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 U937 U937 NUM CD NumType=Card _ _ _ _ 5 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 which which PRON WDT PronType=Rel _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 fully fully ADV RB _ _ _ _ _ 12 permissive permissive ADJ JJ Degree=Pos _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 HIV HIV PROPN NNP Number=Sing _ _ _ _ 15 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 express express VERB VB VerbForm=Inf _ _ _ _ 21 only only ADV RB _ _ _ _ _ 22 low low ADJ JJ Degree=Pos _ _ _ _ 23 levels level NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 26 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4497 # text = We show here that chronic HIV infection results in both induction of a nuclear factor with antigenic properties indistinguishable from those of NF-kappa B and permanently increased HIV enhancer activity. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 6 HIV Hiv NOUN NN Number=Sing _ _ _ _ 7 infection infection NOUN NN Number=Sing _ _ _ _ 8 results result NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 both both DET DT _ _ _ _ _ 11 induction induction NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 antigenic antigenic ADJ JJ Degree=Pos _ _ _ _ 18 properties property NOUN NNS Number=Plur _ _ _ _ 19 indistinguishable indistinguishable ADJ JJ Degree=Pos _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 permanently permanently ADV RB _ _ _ _ _ 29 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 HIV Hiv NOUN NN Number=Sing _ _ _ _ 31 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 32 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4498 # text = This phenomenon, which is independent of tumour necrosis factor, is associated with HIV replication, and is thus likely to explain at least in part the perpetuation of HIV infection in monocytes. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 phenomenon phenomenon NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 independent independent ADJ JJ Degree=Pos _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 tumour tumour PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 9 necrosis necrosis ADJ JJ Degree=Pos _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 HIV Hiv NOUN NN Number=Sing _ _ _ _ 16 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 thus thus ADV RB _ _ _ _ _ 21 likely likely ADJ JJ Degree=Pos _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 explain explain VERB VB VerbForm=Inf _ _ _ _ 24 at at ADV RB _ _ _ _ _ 25 least least ADV RBS Degree=Sup _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 part part NOUN NN Number=Sing _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 perpetuation perpetuation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 HIV Hiv NOUN NN Number=Sing _ _ _ _ 32 infection infection NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4499 # text = Document 00300121 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300121 00300121 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4500 # text = Functional roles of the transcription factor Oct-2A and the high mobility group protein I/Y in HLA-DRA gene expression. 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 roles role NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 Oct-2 Oct-2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 A a NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 high high ADJ JJ Degree=Pos _ _ _ _ 12 mobility mobility NOUN NN Number=Sing _ _ _ _ 13 group group NOUN NN Number=Sing _ _ _ _ 14 protein protein ADV WRB PronType=Rel _ _ _ _ 15 I/Y I/Y PROPN NNP Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 DRA DRA PROPN NNP Number=Sing _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4501 # text = The class II major histocompatibility complex gene HLA-DRA is expressed in B cells, activated T lymphocytes, and in antigen-presenting cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 class class NOUN NN Number=Sing _ _ _ _ 3 II ii NUM CD NumType=Card _ _ _ _ 4 major major ADJ JJ Degree=Pos _ _ _ _ 5 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 6 complex complex NOUN NN Number=Sing _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 DRA DRA PROPN NNP Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 B b ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 antigen antigen ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 presenting presenting ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4502 # text = In addition, HLA-DRA gene expression is inducible in a variety of cell types by interferon-gamma (IFN-gamma). 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 DRA DRA PROPN NNP Number=Sing _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 variety variety NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 types type NOUN NNS Number=Plur _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 interferon interferon ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 gamma gamma NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4503 # text = Here we show that the lymphoid-specific transcription factor Oct-2A plays a critical role in HLA-DRA gene expression in class II-positive B cell lines, and that the high mobility group protein (HMG) I/Y binds to multiple sites within the DRA promoter, including the Oct-2A binding site. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 lymphoid lymphoid NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 A a NOUN NN Number=Sing _ _ _ _ 15 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 critical critical ADJ JJ Degree=Pos _ _ _ _ 18 role role NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 DRA DRA PROPN NNP Number=Sing _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 class class NOUN NN Number=Sing _ _ _ _ 27 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 positive positive ADJ JJ Degree=Pos _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ _ 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 that that SCONJ IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 high high ADJ JJ Degree=Pos _ _ _ _ 38 mobility mobility NOUN NN Number=Sing _ _ _ _ 39 group group NOUN NN Number=Sing _ _ _ _ 40 protein protein NOUN NN Number=Sing _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 HMG Hmg INTJ UH _ _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ _ 44 I/Y I/y DET DT _ _ _ _ _ 45 binds bind NOUN NNS Number=Plur _ _ _ _ 46 to to ADP IN _ _ _ _ _ 47 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 48 sites site NOUN NNS Number=Plur _ _ _ _ 49 within within ADP IN _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 DRA DRa PROPN NNP Number=Sing _ _ _ _ 52 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 , , PUNCT , _ _ _ _ _ 54 including include VERB VBG VerbForm=Ger _ _ _ _ 55 the the DET DT Definite=Def|PronType=Art _ _ _ _ 56 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 59 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 60 binding binding VERB VBG VerbForm=Ger _ _ _ _ 61 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 62 . . PUNCT . _ _ _ _ _ # sent_id = 4504 # text = Coexpression of HMG I/Y and Oct-2 in cell lines lacking Oct-2 results in high levels of HLA-DRA gene expression, and in vitro DNA-binding studies reveal that HMG I/Y stimulates Oct-2A binding to the HLA-DRA promoter. 1 Coexpression Coexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HMG HMG PROPN NNP Number=Sing _ _ _ _ 4 I/Y I/Y PROPN NNP Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 lines line NOUN NNS Number=Plur _ _ _ _ 12 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 13 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 results result NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 high high ADJ JJ Degree=Pos _ _ _ _ 19 levels level NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 DRA DRA PROPN NNP Number=Sing _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 vitro vitro NOUN NN Number=Sing _ _ _ _ 30 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 binding bind VERB VBG VerbForm=Ger _ _ _ _ 33 studies study NOUN NNS Number=Plur _ _ _ _ 34 reveal reveal ADJ JJ Degree=Pos _ _ _ _ 35 that that SCONJ IN _ _ _ _ _ 36 HMG HMG PROPN NNP Number=Sing _ _ _ _ 37 I/Y I/Y PROPN NNP Number=Sing _ _ _ _ 38 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 A a NOUN NN Number=Sing _ _ _ _ 43 binding binding VERB VBG VerbForm=Ger _ _ _ _ 44 to to ADP IN _ _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 HLA HLa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 DRA DRa PROPN NNP Number=Sing _ _ _ _ 49 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 4505 # text = Thus, Oct-2A and HMG I/Y may synergize to activate HLA-DRA expression in B cells. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Oct-2A Oct-2A PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 HMG HMG PROPN NNP Number=Sing _ _ _ _ 6 I/Y I/Y PROPN NNP Number=Sing _ _ _ _ 7 may may AUX MD VerbForm=Fin _ _ _ _ 8 synergize synergize VERB VB VerbForm=Inf _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 activate activate VERB VB VerbForm=Inf _ _ _ _ 11 HLA HLa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 DRA DRa PROPN NNP Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 B b ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4506 # text = By contrast, Oct-2A is not involved in the IFN-gamma induction of the HLA-DRA gene in HeLa cells, but antisense HMG I/Y dramatically decreases the level of induction. 1 By by ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 A a NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 involved involved ADJ JJ Degree=Pos _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 gamma gamma NOUN NN Number=Sing _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 DRA DRA PROPN NNP Number=Sing _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 but but CCONJ CC _ _ _ _ _ 28 antisense antisense ADJ JJ Degree=Pos _ _ _ _ 29 HMG HMG PROPN NNP Number=Sing _ _ _ _ 30 I/Y I/Y PROPN NNP Number=Sing _ _ _ _ 31 dramatically dramatically ADV RB _ _ _ _ _ 32 decreases decrease VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 level level NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 4507 # text = We conclude that distinct sets of transcription factors are involved in the two modes of HLA-DRA expression, and that HMG I/Y may be important for B cell-specific expression, and is essential for IFN-gamma induction. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 5 sets set NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 involved involved ADJ JJ Degree=Pos _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 two two NUM CD NumType=Card _ _ _ _ 14 modes mode NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 DRA DRA PROPN NNP Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 that that SCONJ IN _ _ _ _ _ 23 HMG HMG PROPN NNP Number=Sing _ _ _ _ 24 I/Y I/Y PROPN NNP Number=Sing _ _ _ _ 25 may may AUX MD VerbForm=Fin _ _ _ _ 26 be be AUX VB VerbForm=Inf _ _ _ _ 27 important important ADJ JJ Degree=Pos _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 B b ADJ JJ Degree=Pos _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 specific specific ADJ JJ Degree=Pos _ _ _ _ 33 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 essential essential ADJ JJ Degree=Pos _ _ _ _ 38 for for ADP IN _ _ _ _ _ 39 IFN Ifn ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 gamma gamma NOUN NN Number=Sing _ _ _ _ 42 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4508 # text = Document 00300130 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300130 00300130 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4509 # text = Functional characterization of the murine homolog of the B cell-specific coactivator BOB.1/OBF.1. B cell-specific transcriptional promoter activity mediated by the octamer motif requires the Oct1 or Oct2 protein and additional B cell-restricted cofactors. 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 characterization characterization NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 murine murine NOUN NN Number=Sing _ _ _ _ 6 homolog homolog NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 B B PROPN NNP Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 14 BOB.1/OBF.1 Bob.1/obf.1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n 16 B b NOUN NN Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT : _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 octamer octamer ADJ JJ Degree=Pos _ _ _ _ 27 motif motif NOUN NN Number=Sing _ _ _ _ 28 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 Oct1 Oct1 NUM CD NumType=Card _ _ _ _ 31 or or CCONJ CC _ _ _ _ _ 32 Oct2 Oct2 NUM CD NumType=Card _ _ _ _ 33 protein protein NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 additional additional ADJ JJ Degree=Pos _ _ _ _ 36 B b NOUN NN Number=Sing _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 cofactors cofactor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 4510 # text = One such cofactor, BOB.1/OBF.1, was recently isolated from human B cells. 1 One one NUM CD NumType=Card _ _ _ _ 2 such such ADJ JJ Degree=Pos _ _ _ _ 3 cofactor cofactor NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 BOB.1/OBF.1 BOB.1/OBF.1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 recently recently ADV RB _ _ _ _ _ 9 isolated isolate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 B b ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 4511 # text = Here, we describe the isolation and detailed characterization of the murine homolog. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 describe describe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 isolation isolation NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 detailed detailed ADJ JJ Degree=Pos _ _ _ _ 9 characterization characterization NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 murine murine NOUN NN Number=Sing _ _ _ _ 13 homolog homolog NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 4512 # text = Full-length cDNAs and genomic clones were isolated, and the gene structure was determined. 1 Full full ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 length length NOUN NN Number=Sing _ _ _ _ 4 cDNAs cDNA NOUN NNS Number=Plur _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 7 clones clone NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 isolated isolate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 gene gene ADJ JJ Degree=Pos _ _ _ _ 14 structure structure NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 determined determin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4513 # text = Comparison of the deduced amino acids shows 88% sequence identity between mouse and human BOB.1/OBF.1. The NH2-terminal 126 amino acids of BOB.1/OBF.1 are both essential and sufficient for interaction with the POU domains of either Oct1 or Oct2. 1 Comparison Comparison NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 deduced deduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 amino amino NOUN NN Number=Sing _ _ _ _ 6 acids acid NOUN NNS Number=Plur _ _ _ _ 7 shows show VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 88 88 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 % % SYM NN Number=Sing _ _ _ _ 10 sequence sequence NOUN NN Number=Sing _ _ _ _ 11 identity identity NOUN NN Number=Sing _ _ _ _ 12 between between ADP IN _ _ _ _ _ 13 mouse mouse NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 BOB.1/OBF.1 Bob.1/obf.1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ 18 The the DET DT Definite=Def|PronType=Art _ _ _ _ 19 NH2 Nh2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 terminal terminal NOUN NN Number=Sing _ _ _ _ 22 126 126 NUM CD NumType=Card _ _ _ _ 23 amino amino DET DT _ _ _ _ _ 24 acids acid NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 BOB.1/OBF.1 Bob.1/obf.1 NOUN NN Number=Sing _ _ _ _ 27 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 both both CCONJ CC _ _ _ _ _ 29 essential essential ADJ JJ Degree=Pos _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 interaction interaction NOUN NN Number=Sing _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 POU pou NOUN NN Number=Sing _ _ _ _ 37 domains domain NOUN NNS Number=Plur _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 either either CCONJ CC _ _ _ _ _ 40 Oct1 Oct1 NUM CD NumType=Card _ _ _ _ 41 or or CCONJ CC _ _ _ _ _ 42 Oct2 Oct2 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 4514 # text = This protein-protein interaction does not require the simultaneous binding of Oct proteins to DNA, and high resolution footprinting of the Oct-DNA interaction reveals that binding of BOB.1/OBF.1 to Oct1 or Oct2 does not alter the interaction with DNA. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 interaction interaction NOUN NN Number=Sing _ _ _ _ 5 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 require require VERB VB VerbForm=Inf _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 simultaneous simultaneous ADJ JJ Degree=Pos _ _ _ _ 10 binding binding NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 Oct Oct PROPN NNP Number=Sing _ _ _ _ 13 proteins protein NOUN NNS Number=Plur _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 high high ADJ JJ Degree=Pos _ _ _ _ 19 resolution resolution NOUN NN Number=Sing _ _ _ _ 20 footprinting footprinting NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 DNA dna NOUN NN Number=Sing _ _ _ _ 26 interaction interaction NOUN NN Number=Sing _ _ _ _ 27 reveals reveal NOUN NNS Number=Plur _ _ _ _ 28 that that SCONJ IN _ _ _ _ _ 29 binding bind VERB VBG VerbForm=Ger _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 BOB.1/OBF BOB.1/OBF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 .1 .1 NUM CD NumType=Card _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 Oct1 Oct1 NUM CD NumType=Card _ _ _ _ 35 or or CCONJ CC _ _ _ _ _ 36 Oct2 Oct2 NUM CD NumType=Card _ _ _ _ 37 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 not not PART RB _ _ _ _ _ 39 alter alter VERB VB VerbForm=Inf _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 interaction interaction NOUN NN Number=Sing _ _ _ _ 42 with with ADP IN _ _ _ _ _ 43 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 4515 # text = BOB.1/OBF.1 can efficiently activate octamer-dependent promoters in fibroblasts; however, it fails to stimulate octamer-dependent enhancer activity. 1 BOB.1/OBF BOB.1/OBF ADP IN _ _ _ _ SpaceAfter=No 2 .1 .1 NUM CD NumType=Card _ _ _ _ 3 can can AUX MD VerbForm=Fin _ _ _ _ 4 efficiently efficiently ADV RB _ _ _ _ _ 5 activate activate VERB VB VerbForm=Inf _ _ _ _ 6 octamer octamer ADV RB _ _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 9 promoters promoter NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 ; ; PUNCT , _ _ _ _ _ 13 however however ADV RB _ _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 16 fails fail VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 19 octamer octamer ADV RB _ _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 22 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4516 # text = Fusion of subdomains of BOB.1/OBF.1 with the GAL4 DNA binding domain reveals that both NH2- and COOH-terminal domains of BOB.1/OBF.1 contribute to full transactivation function, the COOH-terminal domain is more efficient in this transactivation assay. 1 Fusion fusion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 subdomains subdomain NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 BOB.1/OBF.1 BOB.1/OBF.1 PROPN NNP Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 GAL4 Gal4 NOUN NN Number=Sing _ _ _ _ 9 DNA dna NOUN NN Number=Sing _ _ _ _ 10 binding binde VERB VBG VerbForm=Ger _ _ _ _ 11 domain domain NOUN NN Number=Sing _ _ _ _ 12 reveals reveal NOUN NNS Number=Plur _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 both both DET DT _ _ _ _ _ 15 NH2 Nh2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 COOH COOh NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 terminal terminal NOUN NN Number=Sing _ _ _ _ 21 domains domain NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 BOB.1/OBF BOB.1/OBF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 .1 .1 NUM CD NumType=Card _ _ _ _ 25 contribute contribute NOUN NN Number=Sing _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 full full ADJ JJ Degree=Pos _ _ _ _ 28 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 29 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 COOH COOh NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 terminal terminal NOUN NN Number=Sing _ _ _ _ 35 domain domain NOUN NN Number=Sing _ _ _ _ 36 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 more more ADV RBR _ _ _ _ _ 38 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 41 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 42 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 4517 # text = Consistent with the failure of full-length BOB.1/OBF.1 to stimulate octamer-dependent enhancer elements in non B cells, the GAL4 fusions likewise only stimulate from a promoter-proximal position. 1 Consistent consistent ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 failure failure NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 full full ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 length length NOUN NN Number=Sing _ _ _ _ 9 BOB.1/OBF Bob.1/obf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 .1 .1 NUM CD NumType=Card _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 13 octamer octamer ADV RB _ _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 16 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 17 elements element NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 non non X AFX _ _ _ _ _ 20 B b ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 GAL4 GAL4 NOUN NN Number=Sing _ _ _ _ 25 fusions fusion NOUN NNS Number=Plur _ _ _ _ 26 likewise likewise ADV RB _ _ _ _ _ 27 only only ADV RB _ _ _ _ _ 28 stimulate stimulate ADV RB Degree=Pos _ _ _ _ 29 from from ADP IN _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 34 position position NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4518 # text = Document 00300132 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300132 00300132 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4519 # text = Activation of E2F-mediated transcription by human T-cell leukemia virus type I Tax protein in a p16(INK4A)-negative T-cell line. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 E2F E2F PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 12 virus virus NOUN NN Number=Sing _ _ _ _ 13 type type NOUN NN Number=Sing _ _ _ _ 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 15 Tax tax PROPN NNP Number=Sing _ _ _ _ 16 protein protein VERB VB VerbForm=Inf _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 p16 p16 NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 INK4 INK4 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 - - PUNCT : _ _ _ _ SpaceAfter=No 25 negative negative ADJ JJ Degree=Pos _ _ _ _ 26 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4520 # text = The human T-cell leukemia virus type I (HTLV-I) is a causative agent of adult T-cell leukemia. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 type type NOUN NN Number=Sing _ _ _ _ 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 causative causative ADJ JJ Degree=Pos _ _ _ _ 17 agent agent NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 adult adult NOUN NN Number=Sing _ _ _ _ 20 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4521 # text = Although the exact mechanism by which HTLV-I contributes to leukemogenesis is still unclear, the Tax protein is thought to play a major role in this process. 1 Although although SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 exact exact ADJ JJ Degree=Pos _ _ _ _ 4 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 contributes contribute VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 leukemogenesis leukemogenesis PRON DT Number=Sing|PronType=Dem _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 still still ADV RB _ _ _ _ _ 15 unclear unclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 Tax tax NOUN NN Number=Sing _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 play play VERB VB VerbForm=Inf _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 major major ADJ JJ Degree=Pos _ _ _ _ 26 role role NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 29 process process NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4522 # text = This 40-kDa polypeptide is able to interact with the tumor suppressor p16(INK4A). 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kDa kDa NOUN NN Number=Sing _ _ _ _ 5 polypeptide polypeptide NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 able able ADJ JJ Degree=Pos _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 interact interact VERB VB VerbForm=Inf _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 tumor tumor NOUN NN Number=Sing _ _ _ _ 13 suppressor suppressor NOUN NN Number=Sing _ _ _ _ 14 p16 p16 NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 INK4 INK4 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 4523 # text = Consequently, Tax can activate the signaling pathway that lead to the release of E2F that in turn induces expression of factors required for cell cycle progression. 1 Consequently consequently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Tax Tax PROPN NNP Number=Sing _ _ _ _ 4 can can AUX MD VerbForm=Fin _ _ _ _ 5 activate activate VERB VB VerbForm=Inf _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 signaling signal NOUN NN Number=Sing _ _ _ _ 8 pathway pathway NOUN NN Number=Sing _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 lead lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 release release NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 E2 E2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 F F PROPN NNP Number=Sing _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 turn turn NOUN NN Number=Sing _ _ _ _ 20 induces induce NOUN NNS Number=Plur _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 factors factor NOUN NNS Number=Plur _ _ _ _ 24 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 cycle cycle NOUN NN Number=Sing _ _ _ _ 28 progression progression NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4524 # text = In this paper, we demonstrate that Tax can also activate E2F-mediated transcription independently of p16(INK4A). 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 paper paper NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 Tax Tax NOUN NN Number=Sing _ _ _ _ 9 can can AUX MD VerbForm=Fin _ _ _ _ 10 also also ADV RB _ _ _ _ _ 11 activate activate VERB VB VerbForm=Inf _ _ _ _ 12 E2F E2f PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 independently independently ADV RB _ _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 p16 p16 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 INK4 INK4 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4525 # text = Indeed, when Tax is coexpressed with the E2F-1 transcription factor in CEM T-cells, which lack expression of p16(INK4A), it strongly potentiates the E2F-dependent activation of a reporter construct driven by a promoter containing E2F binding sites. 1 Indeed indeed ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 when when ADV WRB PronType=Int _ _ _ _ 4 Tax tax PROPN NNP Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 coexpressed coexpress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 E2F E2f NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 CEM CEM PROPN NNP Number=Sing _ _ _ _ 16 T- T- PUNCT , _ _ _ _ SpaceAfter=No 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 lack lack VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 p16 p16 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 INK4 INK4 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 30 strongly strongly ADV RB _ _ _ _ _ 31 potentiates potentiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 E2F E2f PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 36 activation activation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 reporter reporter NOUN NN Number=Sing _ _ _ _ 40 construct construct NOUN NN Number=Sing _ _ _ _ 41 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 by by ADP IN _ _ _ _ _ 43 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 44 promoter promoter NOUN NN Number=Sing _ _ _ _ 45 containing contain VERB VBG VerbForm=Ger _ _ _ _ 46 E2 E2 NUM CD NumType=Card _ _ _ SpaceAfter=No 47 F F SCONJ IN _ _ _ _ _ 48 binding binding VERB VBG VerbForm=Ger _ _ _ _ 49 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 4526 # text = This stimulation is abrogated by mutations affecting the E2F-binding sites. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 abrogated abrogate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 mutations mutation NOUN NNS Number=Plur _ _ _ _ 7 affecting affect VERB VBG VerbForm=Ger _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 E2F E2f NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 4527 # text = In addition, Tax also stimulates the transcription of the E2F-1 gene itself. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 Tax tax PROPN NNP Number=Sing _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 E2F E2F PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 itself itself PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs|Reflex=Yes _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4528 # text = Using Tax mutants that fail to activate either ATF- or NF-kappaB-dependent promoters and different 5' truncation mutants of the E2F-1 promoter, we show that the Tax-dependent transcriptional control of the E2F1 gene involves, at least in part, the ATF binding site located in the E2F-1 promoter. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 Tax tax NOUN NN Number=Sing _ _ _ _ 3 mutants mutant NOUN NNS Number=Plur _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 fail fail VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 activate activate VERB VB VerbForm=Inf _ _ _ _ 8 either either CCONJ CC _ _ _ _ _ 9 ATF ATF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 17 promoters promoter NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 different different ADJ JJ Degree=Pos _ _ _ _ 20 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ' ' PUNCT '' _ _ _ _ _ 22 truncation truncation NOUN NN Number=Sing _ _ _ _ 23 mutants mutant NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 E2F E2F PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 32 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 that that SCONJ IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 38 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 39 control control NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 E2F1 E2F1 PROPN NNP Number=Sing _ _ _ _ 43 gene gene NOUN NN Number=Sing _ _ _ _ 44 involves involve NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 at at ADV RB _ _ _ _ _ 47 least least ADV RBS Degree=Sup _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 part part NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 , , PUNCT , _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 ATF Atf SCONJ IN _ _ _ _ _ 53 binding bind VERB VBG VerbForm=Ger _ _ _ _ 54 site site NOUN NN Number=Sing _ _ _ _ 55 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 56 in in ADP IN _ _ _ _ _ 57 the the DET DT Definite=Def|PronType=Art _ _ _ _ 58 E2F E2F NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 60 1 1 NUM CD NumType=Card _ _ _ _ 61 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 62 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4529 # text = Document 00300138 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300138 00300138 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4530 # text = Activation-dependent transcriptional regulation of the human Fas promoter requires NF-kappaB p50-p65 recruitment. 1 Activation Activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 4 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 regulation regulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 Fas Fas PROPN NNP Number=Sing _ _ _ _ 10 promoter promoter ADV RB _ _ _ _ _ 11 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 15 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - SYM SYM _ _ _ _ SpaceAfter=No 17 p65 p65 NUM CD NumType=Card _ _ _ _ 18 recruitment recruitment NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4531 # text = Fas (CD95) and Fas ligand (CD95L) are an interacting receptor-ligand pair required for immune homeostasis. 1 Fas Fas PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 CD95 CD95 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 Fas Fas PROPN NNP Number=Sing _ _ _ _ 7 ligand ligand PROPN NNP Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 CD95L Cd95l PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 interacting interact ADJ JJ Degree=Pos _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 ligand ligand NOUN NN Number=Sing _ _ _ _ 17 pair pair NOUN NN Number=Sing _ _ _ _ 18 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 immune immune ADJ JJ Degree=Pos _ _ _ _ 21 homeostasis homeostasis NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4532 # text = Lymphocyte activation results in the upregulation of Fas expression and the acquisition of sensitivity to FasL-mediated apoptosis. 1 Lymphocyte Lymphocyte ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 results result NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Fas Fas PROPN NNP Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 acquisition acquisition NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 FasL FasL VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4533 # text = Although Fas upregulation is central to the preservation of immunologic tolerance, little is known about the molecular machinery underlying this process. 1 Although although SCONJ IN _ _ _ _ _ 2 Fas Fas PROPN NNP Number=Sing _ _ _ _ 3 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 central central ADJ JJ Degree=Pos _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 preservation preservation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 immunologic immunologic ADJ JJ Degree=Pos _ _ _ _ 11 tolerance tolerance NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 little little ADJ JJ Degree=Pos _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 about about ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 19 machinery machinery NOUN NN Number=Sing _ _ _ _ 20 underlying underly VERB VBG VerbForm=Ger _ _ _ _ 21 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 22 process process NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4534 # text = To investigate the events involved in activation-induced Fas upregulation, we have examined mRNA accumulation, fas promoter activity, and protein expression in the Jurkat T-cell line treated with phorbol myristate acetate and ionomycin (P/I), pharmacological mimics of T-cell receptor activation. 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 events event NOUN NNS Number=Plur _ _ _ _ 5 involved involved ADJ JJ Degree=Pos _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 Fas Fas NOUN NNS Number=Plur _ _ _ _ 11 upregulation upregulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 17 accumulation accumulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 fas fa NOUN NN Number=Sing _ _ _ _ 20 promoter promoter NOUN NN Number=Sing _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 protein protein NOUN NN Number=Sing _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 29 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 line line NOUN NN Number=Sing _ _ _ _ 32 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 35 myristate myristate NOUN NN Number=Sing _ _ _ _ 36 acetate acetate NOUN NN Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 ionomycin ionomycin NOUN NN Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 P/ Pith NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 pharmacological pharmacological ADJ JJ Degree=Pos _ _ _ _ 45 mimics mimics NOUN NNS Number=Plur _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 cell cell NOUN NN Number=Sing _ _ _ _ 49 receptor receptor NOUN NN Number=Sing _ _ _ _ 50 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 4535 # text = Although resting Jurkat cells express Fas, Fas mRNA was induced approximately 10-fold in 2 h upon P/I stimulation. 1 Although although SCONJ IN _ _ _ _ _ 2 resting rest VERB VBG VerbForm=Ger _ _ _ _ 3 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 express express ADJ JJ Degree=Pos _ _ _ _ 6 Fas Fas NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 Fas Fas PROPN NNP Number=Sing _ _ _ _ 9 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 approximately approximately ADV RB _ _ _ _ _ 13 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 fold fold NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 2 2 NUM CD NumType=Card _ _ _ _ 18 h h NOUN NN Number=Sing _ _ _ _ 19 upon upon ADP IN _ _ _ _ _ 20 P/I P/I PROPN NNP Number=Sing _ _ _ _ 21 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4536 # text = Using sequential deletion mutants of the human fas promoter in transient transfection assays, we identified a 47-bp sequence (positions -306 to -260 relative to the ATG) required for activation-driven fas upregulation. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 sequential sequential ADJ JJ Degree=Pos _ _ _ _ 3 deletion deletion NOUN NN Number=Sing _ _ _ _ 4 mutants mutant NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 fas fas NOUN NN Number=Sing _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 transient transient ADJ JJ Degree=Pos _ _ _ _ 12 transfection transfection NOUN NN Number=Sing _ _ _ _ 13 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 16 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 47 47 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 bp bp NOUN NN Number=Sing _ _ _ _ 21 sequence sequence NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 positions position NOUN NNS Number=Plur _ _ _ _ 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 306 306 NUM CD NumType=Card _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 - - SYM SYM _ _ _ _ SpaceAfter=No 28 260 260 NUM CD NumType=Card _ _ _ _ 29 relative relative ADV RB _ _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 ATG ATG NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT , _ _ _ _ SpaceAfter=No 38 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 fas fas NOUN NNS Number=Plur _ _ _ _ 40 upregulation upregulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 4537 # text = Sequence analysis revealed the presence of a previously unrecognized composite binding site for both the Sp1 and NF-kappaB transcription factors at positions -295 to -286. 1 Sequence Sequence NOUN NN Number=Sing _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 presence presence NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 previously previously ADV RB _ _ _ _ _ 9 unrecognized unrecognized ADJ JJ Degree=Pos _ _ _ _ 10 composite composite SCONJ IN _ _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 both both CCONJ CC _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 Sp1 sp1 PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ _ 23 at at ADP IN _ _ _ _ _ 24 positions position NOUN NNS Number=Plur _ _ _ _ 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 295 295 NUM CD NumType=Card _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 - - SYM SYM _ _ _ _ SpaceAfter=No 29 286 286 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4538 # text = Electrophoretic mobility shift assay (EMSA) and supershift analyses of this region documented constitutive binding of Sp1 in unactivated nuclear extracts and inducible binding of p50-p65 NF-kappaB heterodimers after P/I activation. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assay assay NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 EMSA EMSA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 supershift supershift VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 10 analyses analysis NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 13 region region NOUN NN Number=Sing _ _ _ _ 14 documented document VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 16 binding binding NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 unactivated unactivated ADJ JJ Degree=Pos _ _ _ _ 21 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 22 extracts extract NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 25 binding binding NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 p65 p65 NOUN NN Number=Sing _ _ _ _ 30 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 33 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 34 after after ADP IN _ _ _ _ _ 35 P/ p/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 37 activation activation VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 4539 # text = Sp1 and NF-kappaB transcription factor binding was shown to be mutually exclusive by EMSA displacement studies with purified recombinant Sp1 and recombinant p50. 1 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 mutually mutually ADV RB _ _ _ _ _ 14 exclusive exclusive ADJ JJ Degree=Pos _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 EMSA EMSA PROPN NNP Number=Sing _ _ _ _ 17 displacement displacement NOUN NN Number=Sing _ _ _ _ 18 studies study NOUN NNS Number=Plur _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 recombinant recombinant NOUN NN Number=Sing _ _ _ _ 22 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 25 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4540 # text = The functional contribution of the kappaB-Sp1 composite site in P/I-inducible fas promoter activation was verified by using kappaB-Sp1 concatamers (-295 to -286) in a thymidine kinase promoter-driven reporter construct and native promoter constructs in Jurkat cells overexpressing IkappaB-alpha. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 functional functional ADJ JJ Degree=Pos _ _ _ _ 3 contribution contribution NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 9 composite composite ADJ JJ Degree=Pos _ _ _ _ 10 site site NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 P/I P/I PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 -inducible -inducible ADJ JJ Degree=Pos _ _ _ _ 14 fas fas NOUN NN Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 verified verify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by SCONJ IN _ _ _ _ _ 20 using use VERB VBG VerbForm=Ger _ _ _ _ 21 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 24 concatamers concatamer NOUN NNS Number=Plur _ _ _ _ 25 (- (- PUNCT . _ _ _ _ SpaceAfter=No 26 295 295 NUM CD NumType=Card _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 - - SYM SYM _ _ _ _ SpaceAfter=No 29 286 286 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 thymidine thymidine NOUN NN Number=Sing _ _ _ _ 34 kinase kinase NOUN NN Number=Sing _ _ _ _ 35 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 driven driven VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 reporter reporter NOUN NN Number=Sing _ _ _ _ 39 construct construct NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 native native ADJ JJ Degree=Pos _ _ _ _ 42 promoter promoter NOUN NN Number=Sing _ _ _ _ 43 constructs construct NOUN NNS Number=Plur _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 46 cells cell NOUN NNS Number=Plur _ _ _ _ 47 overexpressing overexpresse VERB VBG VerbForm=Ger _ _ _ _ 48 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 4541 # text = Site-directed mutagenesis of the critical guanine nucleotides in the kappaB-Sp1 element documented the essential role of this site in activation-dependent fas promoter induction. 1 Site site ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 critical critical ADJ JJ Degree=Pos _ _ _ _ 8 guanine guanine NOUN NN Number=Sing _ _ _ _ 9 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 kappaB kappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 15 element element NOUN NN Number=Sing _ _ _ _ 16 documented document VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 essential essential ADJ JJ Degree=Pos _ _ _ _ 19 role role NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 22 site site NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 27 fas fas NOUN NN Number=Sing _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ _ 29 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4542 # text = Document 00300143 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300143 00300143 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4543 # text = HIV type 1 protease activation of NF-kappa B within T lymphoid cells. 1 HIV Hiv NOUN NN Number=Sing _ _ _ _ 2 type type NOUN NN Number=Sing _ _ _ _ 3 1 1 NUM CD NumType=Card _ _ _ _ 4 protease protease NOUN NN Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B b PROPN NNP Number=Sing _ _ _ _ 11 within within ADP IN _ _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4544 # text = NF-kappa B is a nuclear protein of the rel oncogene family capable of enhancing transcription of several cellular genes, including IL-2 and the IL-2 receptor, and viral genes transcribed from the HIV-1 LTR. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 rel rel ADJ JJ Degree=Pos _ _ _ _ 12 oncogene oncogene ADJ JJ Degree=Pos _ _ _ _ 13 family family NOUN NN Number=Sing _ _ _ _ 14 capable capable ADJ JJ Degree=Pos _ _ _ _ 15 of of SCONJ IN _ _ _ _ _ 16 enhancing enhance VERB VBG VerbForm=Ger _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 several several ADJ JJ Degree=Pos _ _ _ _ 20 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 including include VERB VBG VerbForm=Ger _ _ _ _ 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ _ 32 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 viral viral ADJ JJ Degree=Pos _ _ _ _ 36 genes gene NOUN NNS Number=Plur _ _ _ _ 37 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 from from ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 1 1 NUM CD NumType=Card _ _ _ _ 43 LTR Ltr NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 4545 # text = It has been reported that HIV-1 protease may cleave the NF-kappa B precursor to its active form in vitro. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 4 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 protease protease NOUN NN Number=Sing _ _ _ _ 10 may may AUX MD VerbForm=Fin _ _ _ _ 11 cleave cleave VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 precursor precursor NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 active active ADJ JJ Degree=Pos _ _ _ _ 21 form form NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4546 # text = In this study the effects of HIV protease on NF-kappa B precursor activation were examined in Jurkat T cells by introducing a protease expression vector into the cells. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 HIV HIV NOUN NN Number=Sing _ _ _ _ 8 protease protease NOUN NN Number=Sing _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 precursor precursor NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 by by SCONJ IN _ _ _ _ _ 23 introducing introduce VERB VBG VerbForm=Ger _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 protease protease NOUN NN Number=Sing _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 vector vector NOUN NN Number=Sing _ _ _ _ 28 into into ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4547 # text = Increased NF-kappa B activity was observed and this increased activity was blocked by a specific inhibitor of the viral protease. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 observed observe ADJ JJ Degree=Pos _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 increased increased VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 viral viral ADJ JJ Degree=Pos _ _ _ _ 22 protease protease NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4548 # text = Viral transcription, as measured using LTR-CAT assays, was only slightly enhanced in the HIV-protease expressing cells, while secretion of IL-2 and expression of the IL-2 receptor were not affected. 1 Viral viral ADJ JJ Degree=Pos _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 as as SCONJ IN _ _ _ _ _ 5 measured measure VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 using use VERB VBG VerbForm=Ger _ _ _ _ 7 LTR LTR NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 CAT cat NOUN NN Number=Sing _ _ _ _ 10 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 only only ADV RB _ _ _ _ _ 14 slightly slightly ADV RB _ _ _ _ _ 15 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 HIV- Hiv- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 protease protease NOUN NN Number=Sing _ _ _ _ 20 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 while while SCONJ IN _ _ _ _ _ 24 secretion secretion NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 2 2 NUM CD NumType=Card _ _ _ _ 36 receptor receptor NOUN NN Number=Sing _ _ _ _ 37 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 38 not not PART RB _ _ _ _ _ 39 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 4549 # text = The limited activation of NF-kappa B by HIV protease appears unlikely to have a significant effect on virus expression or T cell function. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 limited limited ADJ JJ Degree=Pos _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B B PROPN NNP Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 HIV HIV PROPN NNP Number=Sing _ _ _ _ 11 protease protease NOUN NN Number=Sing _ _ _ _ 12 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 unlikely unlikely ADJ JJ Degree=Pos _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 have have VERB VB VerbForm=Inf _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 significant significant ADJ JJ Degree=Pos _ _ _ _ 18 effect effect NOUN NN Number=Sing _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 virus virus NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 T t NOUN NN Number=Sing _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4550 # text = Document 00300144 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300144 00300144 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4551 # text = Nitric oxide decreases cytokine-induced endothelial activation. 1 Nitric Nitric PROPN NNP Number=Sing _ _ _ _ 2 oxide oxide ADV RB _ _ _ _ _ 3 decreases decrease VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 4552 # text = Nitric oxide selectively reduces endothelial expression of adhesion molecules and proinflammatory cytokines. 1 Nitric Nitric ADJ JJ Degree=Pos _ _ _ _ 2 oxide oxide NOUN NN Number=Sing _ _ _ _ 3 selectively selectively ADV RB _ _ _ _ _ 4 reduces reduce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 9 molecules molecule NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 12 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4553 # text = To test the hypothesis that nitric oxide (NO) limits endothelial activation, we treated cytokine-stimulated human saphenous vein endothelial cells with several NO donors and assessed their effects on the inducible expression of vascular cell adhesion molecule-1 (VCAM-1). 1 To to PART TO _ _ _ _ _ 2 test test VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 nitric nitric ADJ JJ Degree=Pos _ _ _ _ 7 oxide oxide NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 NO no INTJ UH _ _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 limits limits NOUN NNS Number=Plur _ _ _ _ 12 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 16 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 saphenous saphenous ADJ JJ Degree=Pos _ _ _ _ 22 vein vein NOUN NN Number=Sing _ _ _ _ 23 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 several several ADJ JJ Degree=Pos _ _ _ _ 27 NO no ADJ JJ Degree=Pos _ _ _ _ 28 donors donor NOUN NNS Number=Plur _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 assessed assess VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 32 effects effect NOUN NNS Number=Plur _ _ _ _ 33 on on ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 41 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 1 1 NUM CD NumType=Card _ _ _ _ 44 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 45 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 4554 # text = In a concentration-dependent manner, NO inhibited interleukin (IL)-1 alpha-stimulated VCAM-1 expression by 35-55% as determined by cell surface enzyme immunoassays and flow cytometry. 1 In in ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 concentration concentration NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 6 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 NO no DET DT _ _ _ _ _ 9 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 - - SYM SYM _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 alpha- alpha- PUNCT : _ _ _ _ SpaceAfter=No 17 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 35 35 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - SYM SYM _ _ _ _ SpaceAfter=No 25 55 55 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 % % SYM NN Number=Sing _ _ _ _ 27 as as SCONJ IN _ _ _ _ _ 28 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 surface surface NOUN NN Number=Sing _ _ _ _ 32 enzyme enzyme NOUN NN Number=Sing _ _ _ _ 33 immunoassays immunoassay NOUN NNS Number=Plur _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 flow flow VERB VB VerbForm=Inf _ _ _ _ 36 cytometry cytometry NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 4555 # text = This inhibition was paralleled by reduced monocyte adhesion to endothelial monolayers in nonstatic assays, was unaffected by cGMP analogues, and was quantitatively similar after stimulation by either IL-1 alpha, IL-1 beta, IL-4, tumor necrosis factor (TNF alpha), or bacterial lipopolysaccharide. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 paralleled parallel VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 8 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 11 monolayers monolayer NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 nonstatic nonstatic ADJ JJ Degree=Pos _ _ _ _ 14 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 unaffected unaffected ADJ JJ Degree=Pos _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 cGMP cgmp NOUN NN Number=Sing _ _ _ _ 20 analogues analogue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 quantitatively quantitatively ADV RB _ _ _ _ _ 25 similar similar ADJ JJ Degree=Pos _ _ _ _ 26 after after ADP IN _ _ _ _ _ 27 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 either either CCONJ CC _ _ _ _ _ 30 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ _ 33 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ _ 38 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 tumor tumor NOUN NN Number=Sing _ _ _ _ 45 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 46 factor factor NOUN NN Number=Sing _ _ _ _ 47 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 48 TNF Tnf NOUN NN Number=Sing _ _ _ _ 49 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 51 , , PUNCT , _ _ _ _ _ 52 or or CCONJ CC _ _ _ _ _ 53 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 54 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 4556 # text = NO also decreased the endothelial expression of other leukocyte adhesion molecules (E-selectin and to a lesser extent, intercellular adhesion molecule-1) and secretable cytokines (IL-6 and IL-8). 1 NO no INTJ UH _ _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 other other ADJ JJ Degree=Pos _ _ _ _ 9 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 10 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 11 molecules molecule NOUN NNS Number=Plur _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 E- E- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 selectin selectin NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 lesser lesser ADJ JJR Degree=Cmp _ _ _ _ 19 extent extent NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 intercellular intercellular ADJ JJ Degree=Pos _ _ _ _ 22 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 23 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 1 1 X LS _ _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 secretable secretable ADJ JJ Degree=Pos _ _ _ _ 29 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 6 6 NUM CD NumType=Card _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 IL il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - SYM SYM _ _ _ _ SpaceAfter=No 37 8 8 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 4557 # text = Inhibition of endogenous NO production by L-N-monomethyl-arginine also induced the expression of VCAM-1, but did not augment cytokine-induced VCAM-1 expression. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 4 NO no DET DT _ _ _ _ _ 5 production production NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 L L PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 N-monomethyl N-monomethyl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 arginine arginine NOUN NN Number=Sing _ _ _ _ 12 also also ADV RB _ _ _ _ _ 13 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 but but CCONJ CC _ _ _ _ _ 22 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 not not PART RB _ _ _ _ _ 24 augment augment VERB VB VerbForm=Inf _ _ _ _ 25 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4558 # text = Nuclear run-on assays, transfection studies using various VCAM-1 promoter reporter gene constructs, and electrophoretic mobility shift assays indicated that NO represses VCAM-1 gene transcription, in part, by inhibiting NF-kappa B. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 run run VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 on on ADP IN _ _ _ _ _ 5 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 transfection transfection NOUN NN Number=Sing _ _ _ _ 8 studies study NOUN NNS Number=Plur _ _ _ _ 9 using use VERB VBG VerbForm=Ger _ _ _ _ 10 various various ADJ JJ Degree=Pos _ _ _ _ 11 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 reporter reporter NOUN NN Number=Sing _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 constructs construct NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 21 mobility mobility NOUN NN Number=Sing _ _ _ _ 22 shift shift NOUN NN Number=Sing _ _ _ _ 23 assays assays NOUN NNS Number=Plur _ _ _ _ 24 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 NO no DET DT _ _ _ _ _ 27 represses repress NOUN NNS Number=Plur _ _ _ _ 28 VCAM VCAm NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - SYM SYM _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ _ 32 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 part part NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 by by SCONJ IN _ _ _ _ _ 38 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 39 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 kappa kappa PROPN NNP Number=Sing _ _ _ _ 42 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 4559 # text = We propose that NO's ability to limit endothelial activation and inhibit monocyte adhesion may contribute to some of its antiatherogenic and antiinflammatory properties within the vessel wall. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 NO no PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 's 's PART POS _ _ _ _ _ 6 ability ability NOUN NN Number=Sing _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 limit limit VERB VB VerbForm=Inf _ _ _ _ 9 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 inhibit inhibit NOUN NN Number=Sing _ _ _ _ 13 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 14 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 15 may may AUX MD VerbForm=Fin _ _ _ _ 16 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 some some DET DT _ _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 antiatherogenic antiatherogenic ADJ JJ Degree=Pos _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 antiinflammatory antiinflammatory ADJ JJ Degree=Pos _ _ _ _ 24 properties property NOUN NNS Number=Plur _ _ _ _ 25 within within ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 vessel vessel NOUN NN Number=Sing _ _ _ _ 28 wall wall NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4560 # text = Document 00300148 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300148 00300148 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4561 # text = Activated platelets induce monocyte chemotactic protein-1 secretion and surface expression of intercellular adhesion molecule-1 on endothelial cells [see comments] BACKGROUND: Platelet/endothelium interaction plays an important role in the pathophysiology of inflammation and atherosclerosis. 1 Activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 platelets platelet NOUN NNS Number=Plur _ _ _ _ 3 induce induce ADV RB _ _ _ _ _ 4 monocyte monocyte ADJ JJ Degree=Pos _ _ _ _ 5 chemotactic chemotactic ADJ JJ Degree=Pos _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 secretion secretion NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 surface surface NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 intercellular intercellular ADJ JJ Degree=Pos _ _ _ _ 15 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 16 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 see see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 comments comment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n 26 BACKGROUND background NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 : : PUNCT : _ _ _ _ _ 28 Platelet Platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 / / PUNCT , _ _ _ _ SpaceAfter=No 30 endothelium endothelium NOUN NN Number=Sing _ _ _ _ 31 interaction interaction NOUN NN Number=Sing _ _ _ _ 32 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 important important ADJ JJ Degree=Pos _ _ _ _ 35 role role NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 pathophysiology pathophysiology NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 atherosclerosis atherosclerosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 4562 # text = The role of platelets for monocyte chemotactic protein-1 (MCP-1) secretion and surface expression of intercellular adhesion molecule-1 (ICAM-1) on endothelial cells has been assessed. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 platelets platelet NOUN NNS Number=Plur _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 monocyte monocyte ADJ JJ Degree=Pos _ _ _ _ 7 chemotactic chemotactic ADJ JJ Degree=Pos _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 MCP Mcp NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 secretion secretion NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 surface surface NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 intercellular intercellular ADJ JJ Degree=Pos _ _ _ _ 22 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 23 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT : _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 X LS _ _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 on on ADP IN _ _ _ _ _ 32 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ _ 34 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 36 assessed assess VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 4563 # text = METHODS AND RESULTS: Monolayers of human umbilical vein endothelial cells were incubated with nonstimulated or ADP-activated platelets for 6 hours, and secretion of MCP-1 and surface expression of ICAM-1 were determined by ELISA and flow cytometry, respectively. 1 METHODS method NOUN NNS Number=Plur _ _ _ _ 2 AND and CCONJ CC _ _ _ _ _ 3 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ 5 Monolayers Monolayer NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 9 vein vein NOUN NN Number=Sing _ _ _ _ 10 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 incubated incubate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 nonstimulated nonstimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 ADP Adp NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 platelets platelet NOUN NNS Number=Plur _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 6 6 NUM CD NumType=Card _ _ _ _ 23 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 secretion secretion NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 MCP MCP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 surface surface NOUN NN Number=Sing _ _ _ _ 33 expression expression NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 ICAM ICAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ _ 38 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 39 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 40 by by ADP IN _ _ _ _ _ 41 ELISA ELISA PROPN NNP Number=Sing _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 flow flow VERB VB VerbForm=Inf _ _ _ _ 44 cytometry cytometry NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 4564 # text = In the presence of ADP-activated platelets, both MCP-1 secretion and ICAM-1 surface expression were significantly increased compared with nonstimulated platelets (P<0.02). 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 presence presence NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 ADP ADP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 platelets platelet NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 both both CCONJ CC _ _ _ _ _ 11 MCP Mcp NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 secretion secretion NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 surface surface NOUN NN Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 significantly significantly ADV RB _ _ _ _ _ 23 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 nonstimulated nonstimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 platelets platelet NOUN NNS Number=Plur _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 P p NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 < < PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 0.02 0.02 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4565 # text = Activation of the transcription factor nuclear factor-kappaB (NF-kappaB) determined by electrophoretic mobility shift assay and kappaB-dependent transcriptional activity was enhanced in the presence of activated platelets. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 -kappaB -kappaB PROPN NNP Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 17 mobility mobility NOUN NN Number=Sing _ _ _ _ 18 shift shift NOUN NN Number=Sing _ _ _ _ 19 assay assay NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 kappaB kappaB NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 24 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 presence presence NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 platelets platelet NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4566 # text = In addition, ADP-activated platelets induced MCP-1 and ICAM-1 promoter-dependent transcription. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 ADP Adp NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 platelets platelet NOUN NNS Number=Plur _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 MCP MCP NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4567 # text = Liposomal transfection of a double-stranded kappaB phosphorothioate oligonucleotide, but not of the mutated form, inhibited MCP-1 secretion and surface expression of ICAM-1 on activated endothelium (P<0.05). 1 Liposomal Liposomal ADJ JJ Degree=Pos _ _ _ _ 2 transfection transfection NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 stranded strand VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 kappaB kappab NOUN NN Number=Sing _ _ _ _ 9 phosphorothioate phosphorothioate NOUN NN Number=Sing _ _ _ _ 10 oligonucleotide oligonucleotide NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 not not ADV RB _ _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 form form NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 MCP Mcp NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 secretion secretion NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 surface surface NOUN NN Number=Sing _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 ICAM ICAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 on on ADP IN _ _ _ _ _ 32 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 endothelium endothelium NOUN NN Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 P p NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 < < PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 0.05 0.05 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 4568 # text = CONCLUSIONS: The present study indicates that activated platelets modulate chemotactic (MCP-1) and adhesive (ICAM-1) properties of endothelial cells via an NF-kappaB-dependent mechanism. 1 CONCLUSIONS conclusion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 The the DET DT Definite=Def|PronType=Art _ _ _ _ 4 present present ADJ JJ Degree=Pos _ _ _ _ 5 study study NOUN NN Number=Sing _ _ _ _ 6 indicates indicate NOUN NNS Number=Plur _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 platelets platelet NOUN NNS Number=Plur _ _ _ _ 10 modulate modulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 chemotactic chemotactic ADJ JJ Degree=Pos _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 MCP Mcp NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 X LS _ _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 adhesive adhesive NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 ICAM ICAm NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - SYM SYM _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 properties property NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 via via ADP IN _ _ _ _ _ 29 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 35 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 4569 # text = Platelet-induced activation of the NF-kappaB system might contribute to early inflammatory events in atherogenesis. 1 Platelet Platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 system system NOUN NN Number=Sing _ _ _ _ 11 might might AUX MD VerbForm=Fin _ _ _ _ 12 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 early early ADJ JJ Degree=Pos _ _ _ _ 15 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 16 events event NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 atherogenesis atherogenesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4570 # text = Document 00300151 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300151 00300151 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4571 # text = Decreased proteasome-mediated degradation in T cells from the elderly: 1 Decreased Decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 proteasome proteasome ADV RB _ _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 degradation degradation NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 elderly elderly ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 : : PUNCT : _ _ _ _ _ # sent_id = 4572 # text = A role in immune senescence. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 immune immune ADJ JJ Degree=Pos _ _ _ _ 5 senescence senescence NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4573 # text = Induction of NFkappaB is a highly regulated process requiring phosphorylation, ubiquitination, and proteasome-mediated degradation of the cytosolic inhibitor IkappaBalpha. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 highly highly ADV RB _ _ _ _ _ 7 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 process process NOUN NN Number=Sing _ _ _ _ 9 requiring require VERB VBG VerbForm=Ger _ _ _ _ 10 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 ubiquitination ubiquitination NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 proteasome proteasome VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 degradation degradation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 22 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 23 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4574 # text = Analyses of the regulation of IkappaBalpha in TNF-alpha-treated 1 Analyses analysis NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 -alpha-treated -alpha-treated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ # sent_id = 4575 # text = T lymphocytes from young and elderly donors revealed severely compromised degradation of IkappaBalpha in T cells from the elderly. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 young young ADJ JJ Degree=Pos _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 elderly elderly ADJ JJ Degree=Pos _ _ _ _ 7 donors donor NOUN NNS Number=Plur _ _ _ _ 8 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 severely severely ADV RB _ _ _ _ _ 10 compromised compromise VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 degradation degradation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 T T PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 elderly elderly NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4576 # text = Examination of activation-induced phosphorylation and ubiquitination of IkappaBalpha did not demonstrate any significant age-related alterations. 1 Examination examination NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 ubiquitination ubiquitination NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 11 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 demonstrate demonstrate VERB VB VerbForm=Inf _ _ _ _ 14 any any DET DT _ _ _ _ _ 15 significant significant ADJ JJ Degree=Pos _ _ _ _ 16 age age NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 related related ADJ JJ Degree=Pos _ _ _ _ 19 alterations alteration NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4577 # text = However, examination of proteasome activity in these T cells using fluorogenic peptide assays revealed a significant age-related decline in chymotryptic activity. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 examination examination NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 proteasome proteasome ADJ JJ Degree=Pos _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 using use VERB VBG VerbForm=Ger _ _ _ _ 12 fluorogenic fluorogenic ADJ JJ Degree=Pos _ _ _ _ 13 peptide peptide NOUN NN Number=Sing _ _ _ _ 14 assays assays NOUN NNS Number=Plur _ _ _ _ 15 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 significant significant ADJ JJ Degree=Pos _ _ _ _ 18 age age NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 related related ADJ JJ Degree=Pos _ _ _ _ 21 decline decline NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 chymotryptic chymotryptic ADJ JJ Degree=Pos _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4578 # text = These results suggest that a decline in proteasome activity results in a failure to fully degrade IkappaBalpha in the elderly. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 decline decline NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 proteasome proteasome ADJ JJ Degree=Pos _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 results result NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 failure failure NOUN NN Number=Sing _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 fully fully ADV RB _ _ _ _ _ 16 degrade degrade VERB VB VerbForm=Inf _ _ _ _ 17 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 elderly elderly NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4579 # text = This failure to degrade IkappaBalpha may underlie both the observed decrease in NFkappaB induction and the IL-2 receptor expression in TNF-treated T cells during aging. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 failure failure NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 degrade degrade VERB VB VerbForm=Inf _ _ _ _ 5 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 6 may may AUX MD VerbForm=Fin _ _ _ _ 7 underlie underlie VERB VB VerbForm=Inf _ _ _ _ 8 both both CCONJ CC _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 observed observed ADJ JJ Degree=Pos _ _ _ _ 11 decrease decrease NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 NFkappaB Nfkappab PROPN NNP Number=Sing _ _ _ _ 14 induction induction NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 T t PROPN NNP Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 during during ADP IN _ _ _ _ _ 29 aging aging NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4580 # text = Thus, decreased proteasome-mediated degradation may be central to immune dysfunction that accompanies aging. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 proteasome proteasome ADV RB _ _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 mediated mediate ADJ JJ Degree=Pos _ _ _ _ 7 degradation degradation NOUN NN Number=Sing _ _ _ _ 8 may may AUX MD VerbForm=Fin _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 central central ADJ JJ Degree=Pos _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 immune immune VERB VB VerbForm=Inf _ _ _ _ 13 dysfunction dysfunction NOUN NN Number=Sing _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 accompanies accompany NOUN NNS Number=Plur _ _ _ _ 16 aging age VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4581 # text = Copyright 1999 Academic Press. 1 Copyright copyright NOUN NN Number=Sing _ _ _ _ 2 1999 1999 NUM CD NumType=Card _ _ _ _ 3 Academic academic PROPN NNP Number=Sing _ _ _ _ 4 Press. Press. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4582 # text = Document 00300152 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300152 00300152 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4583 # text = The regulation of HIV by retinoic acid correlates with cellular expression of the retinoic acid receptors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 HIV HIV PROPN NNP Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 7 acid acid ADJ JJ Degree=Pos _ _ _ _ 8 correlates correlate NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 15 acid acid ADJ JJ Degree=Pos _ _ _ _ 16 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4584 # text = OBJECTIVES: 1 OBJECTIVES objective NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 4585 # text = To analyze the effect of retinoic acids (RA) on HIV-1 expression and correlate this effect with expression levels of RA receptors (RARs) in T-lymphoid and monocytoid cell lines. 1 To to PART TO _ _ _ _ _ 2 analyze analyze VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effect effect NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 7 acids acid NOUN NNS Number=Plur _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 RA RA X AFX _ _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 correlate correlate VERB VB VerbForm=Inf _ _ _ _ 18 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 19 effect effect NOUN NN Number=Sing _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 levels level NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 RA Ra PROPN NNP Number=Sing _ _ _ _ 25 receptors receptor NOUN NNS Number=Plur _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 RARs RAR NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 lymphoid lymphoid NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 monocytoid monocytoid ADJ JJ Degree=Pos _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 4586 # text = DESIGN AND METHODS: 1 DESIGN Design NOUN NN Number=Sing _ _ _ _ 2 AND and CCONJ CC _ _ _ _ _ 3 METHODS method NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ # sent_id = 4587 # text = The effect of all-trans and 9-cis RA on HIV-1 production in T-lymphoid (H9, CEM) and monocytoid (U937,THP-1) cell lines was measured during acute and chronic infection. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 all all DET DT _ _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 trans tran NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 cis cis NOUN NN Number=Sing _ _ _ _ 11 RA Ra NOUN NN Number=Sing _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 production production NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 lymphoid lymphoid NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 H9 H9 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 CEM CEM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 monocytoid monocytoid NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 U937 U937 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ SpaceAfter=No 30 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 lines line NOUN NNS Number=Plur _ _ _ _ 36 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 37 measured measure VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 during during ADP IN _ _ _ _ _ 39 acute acute NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 42 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 4588 # text = The expression levels of human RAR alpha (hRAR alpha, receptor for all-trans RA) and the human retinoid-X receptor alpha (hRXR alpha receptor for 9-cis RA) were determined by Northern blot analysis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 levels level NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 RAR RAR NOUN NN Number=Sing _ _ _ _ 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 hRAR hrar NOUN NN Number=Sing _ _ _ _ 10 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 all all DET DT _ _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 trans tran NOUN NNS Number=Plur _ _ _ _ 17 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 retinoid retinoid NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 X x NOUN NN Number=Sing _ _ _ _ 25 receptor receptor NOUN NN Number=Sing _ _ _ _ 26 alpha alpha NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 hRXR hrxr X GW _ _ _ _ _ 29 alpha alpha X GW _ _ _ _ _ 30 receptor receptor NOUN NN Number=Sing _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 - - PUNCT : _ _ _ _ SpaceAfter=No 34 cis cis NOUN NN Number=Sing _ _ _ _ 35 RA Ra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 38 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 by by ADP IN _ _ _ _ _ 40 Northern northern ADJ JJ Degree=Pos _ _ _ _ 41 blot blot NOUN NN Number=Sing _ _ _ _ 42 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 4589 # text = RESULTS: Both all-trans and 9-cis RA inhibited virus replication in HIV-1 IIIB-infected monocytoid cells, in the presence and absence of the co-stimulatory agent phorbol myristate acetate (PMA). 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Both both DET DT _ _ _ _ _ 4 all all DET DT _ _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 trans tran NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 cis cis NOUN NN Number=Sing _ _ _ _ 11 RA Ra NOUN NN Number=Sing _ _ _ _ 12 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 virus virus NOUN NN Number=Sing _ _ _ _ 14 replication replication NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 IIIB Iiib NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 monocytoid monocytoid NOUN NN Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 presence presence NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 absence absence NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 co-stimulatory co-stimulatory ADJ JJ Degree=Pos _ _ _ _ 33 agent agent NOUN NN Number=Sing _ _ _ _ 34 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 35 myristate myristate NOUN NN Number=Sing _ _ _ _ 36 acetate acetate NOUN NN Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 4590 # text = The retinoids had weak or no stimulatory effects on HIV production by T-cell lines. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 retinoids retinoid NOUN NNS Number=Plur _ _ _ _ 3 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 weak weak ADJ JJ Degree=Pos _ _ _ _ 5 or or CCONJ CC _ _ _ _ _ 6 no no DET DT _ _ _ _ _ 7 stimulatory stimulatory ADJ JJ Degree=Pos _ _ _ _ 8 effects effect NOUN NNS Number=Plur _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 HIV Hiv NOUN NN Number=Sing _ _ _ _ 11 production production NOUN NN Number=Sing _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4591 # text = HIV production by PMA-stimulated T-cell lines was inhibited by these retinoids. 1 HIV Hiv NOUN NN Number=Sing _ _ _ _ 2 production production NOUN NN Number=Sing _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 lines line NOUN NNS Number=Plur _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 14 retinoids retinoid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 4592 # text = The 9-cis RA was generally more effective than all-trans RA in inhibiting HIV production and in combination generally more effective than the single agents alone. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 cis cis NOUN NN Number=Sing _ _ _ _ 5 RA Ra PROPN NNP Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 generally generally ADV RB _ _ _ _ _ 8 more more ADV RBR _ _ _ _ _ 9 effective effective ADJ JJ Degree=Pos _ _ _ _ 10 than than ADP IN _ _ _ _ _ 11 all all DET DT _ _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 trans tran NOUN NNS Number=Plur _ _ _ _ 14 RA Ra NOUN NN Number=Sing _ _ _ _ 15 in in SCONJ IN _ _ _ _ _ 16 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 17 HIV HIV PROPN NNP Number=Sing _ _ _ _ 18 production production NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 combination combination NOUN NN Number=Sing _ _ _ _ 22 generally generally ADV RB _ _ _ _ _ 23 more more ADV RBR _ _ _ _ _ 24 effective effective ADJ JJ Degree=Pos _ _ _ _ 25 than than ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 single single ADJ JJ Degree=Pos _ _ _ _ 28 agents agent NOUN NNS Number=Plur _ _ _ _ 29 alone alone ADV RB _ _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4593 # text = Human RAR alpha was expressed in H9, U937 and THP-1 cells, but almost undetectable in CEM cells. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 RAR Rar NOUN NN Number=Sing _ _ _ _ 3 alpha alpha NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 H9 H9 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 U937 U937 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 almost almost ADV RB _ _ _ _ _ 18 undetectable undetectable ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 CEM CEM PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4594 # text = Human RXR alpha was significantly expressed in U937 and THP-1 cells, weakly expressed in H9 cells and not detectable in CEM cells. 1 Human human PROPN NNP Number=Sing _ _ _ _ 2 RXR Rxr PROPN NNP Number=Sing _ _ _ _ 3 alpha alpha PROPN NNP Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 significantly significantly ADV RB _ _ _ _ _ 6 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 U937 U937 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 weakly weakly ADV RB _ _ _ _ _ 16 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 H9 H9 PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 not not ADV RB _ _ _ _ _ 22 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 CEM CEM PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4595 # text = After stimulation by PMA, RXR alpha expression increased in H9 and U937 cells but not in CEM cells. 1 After after ADP IN _ _ _ _ _ 2 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 RXR RXR X GW _ _ _ _ _ 7 alpha alpha X FW Foreign=Yes _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 H9 H9 PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 U937 U937 NUM CD NumType=Card _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 CEM CEM PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4596 # text = Human RAR alpha expression was unchanged in H9 and CEM cells, and elevated in U937 cells, after PMA stimulation. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 RAR Rar NOUN NN Number=Sing _ _ _ _ 3 alpha alpha NOUN NN Number=Sing _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 unchanged unchange ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 H9 H9 PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 CEM CEM PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 U937 U937 NUM CD NumType=Card _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 after after ADP IN _ _ _ _ _ 20 PMA PMA PROPN NNP Number=Sing _ _ _ _ 21 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4597 # text = CONCLUSION: 1 CONCLUSION conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 4598 # text = The effect of RA on HIV-1 expression was cell-type-dependent and partially correlated with cellular expression of RARs. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 RA RA PROPN NNP Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 partially partially ADV RB _ _ _ _ _ 18 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 RARs RAR NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4599 # text = Endogenous or exogenously administered RA may have a significant role in HIV regulation. 1 Endogenous Endogenous ADJ JJ Degree=Pos _ _ _ _ 2 or or CCONJ CC _ _ _ _ _ 3 exogenously exogenously ADV RB _ _ _ _ _ 4 administered administer VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 RA RA PROPN NNP Number=Sing _ _ _ _ 6 may may AUX MD VerbForm=Fin _ _ _ _ 7 have have VERB VB VerbForm=Inf _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 significant significant ADJ JJ Degree=Pos _ _ _ _ 10 role role NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 HIV HIV PROPN NNP Number=Sing _ _ _ _ 13 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4600 # text = Document 00300154 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300154 00300154 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4601 # text = The state of maturation of monocytes into macrophages determines the effects of IL-4 and IL-13 on HIV replication. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 state state NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 maturation maturation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 7 into into ADP IN _ _ _ _ _ 8 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 9 determines determine VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 effects effect NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 4 4 NUM CD NumType=Card _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 13 13 NUM CD NumType=Card _ _ _ _ 20 on on ADP IN _ _ _ _ _ 21 HIV Hiv NOUN NN Number=Sing _ _ _ _ 22 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4602 # text = The molecular mechanisms of the effects of IL-4 and IL-13 on HIV infection in human monocytes as they matured into monocyte-derived macrophages over 7 days were investigated using HIV-1(BaL), and low passage clinical strains. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 3 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 effects effect NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 4 4 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 13 13 NUM CD NumType=Card _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 HIV Hiv NOUN NN Number=Sing _ _ _ _ 17 infection infection NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 21 as as SCONJ IN _ _ _ _ _ 22 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 23 matured mature VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 into into ADP IN _ _ _ _ _ 25 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 29 over over ADP IN _ _ _ _ _ 30 7 7 NUM CD NumType=Card _ _ _ _ 31 days day NOUN NNS Number=Plur _ _ _ _ 32 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 33 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 34 using use VERB VBG VerbForm=Ger _ _ _ _ 35 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 BaL BaL NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 low low ADJ JJ Degree=Pos _ _ _ _ 44 passage passage NOUN NN Number=Sing _ _ _ _ 45 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 46 strains strains NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 4603 # text = IL-4 and IL-13 up-regulated the expression of both genomic and spliced HIV mRNA in monocytes cultured on Teflon, as determined by Northern analysis and p24 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 13 13 NUM CD NumType=Card _ _ _ _ 8 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 both both CCONJ CC _ _ _ _ _ 15 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 spliced spliced ADJ JJ Degree=Pos _ _ _ _ 18 HIV HIV PROPN NNP Number=Sing _ _ _ _ 19 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 22 cultured culture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 on on ADP IN _ _ _ _ _ 24 Teflon Teflon PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 as as SCONJ IN _ _ _ _ _ 27 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 30 analysis analysis NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 p24 p24 NOUN NN Number=Sing _ _ _ _ # sent_id = 4604 # text = Ag assay. 1 Ag ag ADJ JJ Degree=Pos _ _ _ _ 2 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 . . PUNCT . _ _ _ _ _ # sent_id = 4605 # text = Using a nuclear run-on assay, IL-4 stimulation was shown to enhance transcription by two- to threefold. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 run run NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 on on ADP IN _ _ _ _ _ 7 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 4 4 NUM CD NumType=Card _ _ _ _ 12 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 threefold threefold VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4606 # text = IL-4 stimulated nuclear factor-kappaB nuclear translocation and binding before enhancement of HIV RNA expression. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ _ 4 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappab NOUN NN Number=Sing _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 translocation translocation NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 binding bind VERB VBG VerbForm=Ger _ _ _ _ 13 before before ADP IN _ _ _ _ _ 14 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 HIV HIV PROPN NNP Number=Sing _ _ _ _ 17 RNA RNA PROPN NNP Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 4607 # text = Conversely, IL-4 and IL-13 markedly and significantly inhibited HIV replication at the transcriptional level in monocyte-derived macrophages, and this occurred whether these cytokines were added before or after HIV infection. 1 Conversely Conversely ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - SYM SYM _ _ _ _ SpaceAfter=No 5 4 4 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - SYM SYM _ _ _ _ SpaceAfter=No 9 13 13 NUM CD NumType=Card _ _ _ _ 10 markedly markedly ADV RB _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 significantly significantly ADV RB _ _ _ _ _ 13 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 HIV Hiv NOUN NN Number=Sing _ _ _ _ 15 replication replication NOUN NN Number=Sing _ _ _ _ 16 at at ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 19 level level NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 28 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 whether whether SCONJ IN _ _ _ _ _ 30 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 31 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 32 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 33 added add VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 34 before before ADP IN _ _ _ _ _ 35 or or CCONJ CC _ _ _ _ _ 36 after after ADP IN _ _ _ _ _ 37 HIV Hiv NOUN NN Number=Sing _ _ _ _ 38 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 4608 # text = The reversal from stimulation to inhibition occurred after 3 to 5 days of adherence to plastic. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 reversal reversal NOUN NN Number=Sing _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 7 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 after after ADP IN _ _ _ _ _ 9 3 3 NUM CD NumType=Card _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 5 5 NUM CD NumType=Card _ _ _ _ 12 days day NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 adherence adherence NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 plastic plastic NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4609 # text = IL-4 had no significant effect on HIV reverse transcription. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ _ 4 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 no no DET DT _ _ _ _ _ 6 significant significant ADJ JJ Degree=Pos _ _ _ _ 7 effect effect NOUN NN Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 HIV Hiv NOUN NN Number=Sing _ _ _ _ 10 reverse reverse NOUN NN Number=Sing _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 4610 # text = The effect of both cytokines on the monocyte maturation/differentiation (CD11b, CD13, and CD26) and other macrophage markers (CD14 and CD68) was examined. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 both both DET DT _ _ _ _ _ 5 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 9 maturation maturation NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 CD11 CD11 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 b b NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 CD13 CD13 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 CD26 CD26 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 other other ADJ JJ Degree=Pos _ _ _ _ 23 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 24 markers marker NOUN NNS Number=Plur _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 CD14 CD14 PROPN NNP Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 CD68 CD68 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 31 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4611 # text = IL-4 enhanced CD11b, but inhibited CD26 expression and delayed CD13 loss. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ _ 4 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 CD11 CD11 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 b b NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 but but CCONJ CC _ _ _ _ _ 9 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 CD26 CD26 NUM CD NumType=Card _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 delayed delay ADJ JJ Degree=Pos _ _ _ _ 14 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 13 13 NUM CD NumType=Card _ _ _ _ 16 loss loss NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4612 # text = IL-13 had similar effects on CD11b and CD13, but no effect on CD26. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 13 13 NUM CD NumType=Card _ _ _ _ 4 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 similar similar ADJ JJ Degree=Pos _ _ _ _ 6 effects effect NOUN NNS Number=Plur _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 11 11 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 b b NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 CD13 CD13 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 no no DET DT _ _ _ _ _ 16 effect effect NOUN NN Number=Sing _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 CD26 Cd26 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 4613 # text = Hence, these cytokines do not simply enhance monocyte differentiation, but have complex and slightly divergent effects that impact on HIV replication probably through cell signaling pathways and nuclear factor-kappaB translocation. 1 Hence hence ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 5 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 simply simply ADV RB _ _ _ _ _ 8 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 9 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 10 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 complex complex ADJ JJ Degree=Pos _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 slightly slightly ADV RB _ _ _ _ _ 17 divergent divergent ADJ JJ Degree=Pos _ _ _ _ 18 effects effect NOUN NNS Number=Plur _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 impact impact VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 on on ADP IN _ _ _ _ _ 22 HIV Hiv NOUN NN Number=Sing _ _ _ _ 23 replication replication NOUN NN Number=Sing _ _ _ _ 24 probably probably ADV RB _ _ _ _ _ 25 through through ADP IN _ _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 signaling signaling VERB VBG VerbForm=Ger _ _ _ _ 28 pathways pathway NOUN NNS Number=Plur _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 31 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappaB kappab NOUN NN Number=Sing _ _ _ _ 34 translocation translocation NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4614 # text = Document 00300155 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300155 00300155 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4615 # text = Transcriptional activity and constitutive nuclear localization of the ETS protein Elf-1. Elf-1 is a lymphoid-specific transcription factor that belongs to the ETS protein family. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 activity activity NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 localization localization NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 ETS ets NOUN NN Number=Sing _ _ _ _ 10 protein protein ADV WRB PronType=Rel _ _ _ _ 11 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n 14 Elf Elf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 lymphoid lymphoid NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 specific specific ADJ JJ Degree=Pos _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 belongs belong VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 ETS Ets NOUN NN Number=Sing _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ _ 30 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4616 # text = It can bind to DNA target sequences within a variety of cytokine genes. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 can can AUX MD VerbForm=Fin _ _ _ _ 3 bind bind VERB VB VerbForm=Inf _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 DNA dna NOUN NN Number=Sing _ _ _ _ 6 target target NOUN NN Number=Sing _ _ _ _ 7 sequences sequence NOUN NNS Number=Plur _ _ _ _ 8 within within ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 variety variety NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 4617 # text = We demonstrate that Elf-1 is constitutively localized in the nucleus which is dependent on the presence of amino acids 86-265. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 constitutively constitutively ADV RB _ _ _ _ _ 9 localized localize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 presence presence NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 amino amino DET DT _ _ _ _ _ 21 acids acid NOUN NNS Number=Plur _ _ _ _ 22 86 86 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - SYM SYM _ _ _ _ SpaceAfter=No 24 265 265 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4618 # text = Analysis of Gal4-Elf-1 fusion proteins revealed that the N-terminal 86 amino acids of Elf-1 contain a transcriptional activation domain, the activity of which is attenuated by an internal repression domain. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Gal4- Gal4- NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 fusion fusion NOUN NN Number=Sing _ _ _ _ 8 proteins protein NOUN NNS Number=Plur _ _ _ _ 9 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 N- n- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 terminal terminal NOUN NN Number=Sing _ _ _ _ 14 86 86 NUM CD NumType=Card _ _ _ _ 15 amino amino NOUN NN Number=Sing _ _ _ _ 16 acids acid NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 contain contain NOUN NN Number=Sing _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 which which PRON WDT PronType=Rel _ _ _ _ 31 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 attenuated attenuate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 internal internal ADJ JJ Degree=Pos _ _ _ _ 36 repression repression NOUN NN Number=Sing _ _ _ _ 37 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 4619 # text = Furthermore, Elf-1 interacts specifically with the E74 target sequence and can stimulate transcription driven by the E74 site independent of mitogenic signaling. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 interacts interact NOUN NNS Number=Plur _ _ _ _ 7 specifically specifically ADV RB _ _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 E74 E74 PROPN NNP Number=Sing _ _ _ _ 11 target target NOUN NN Number=Sing _ _ _ _ 12 sequence sequence NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 can can AUX MD VerbForm=Fin _ _ _ _ 15 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 E74 E74 PROPN NNP Number=Sing _ _ _ _ 21 site site NOUN NN Number=Sing _ _ _ _ 22 independent independent ADJ JJ Degree=Pos _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 25 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4620 # text = Thus, Elf-1 is able to stimulate gene transcription which may be required for the development and activity of lymphocytes. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 able able ADJ JJ Degree=Pos _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 may may AUX MD VerbForm=Fin _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 development development NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4621 # text = Document 00300156 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300156 00300156 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4622 # text = Reactive oxygen intermediate-release of fibre-exposed monocytes increases inflammatory cytokine-mRNA level, protein tyrosine kinase and NF-kappaB activity in co-cultured bronchial epithelial cells (BEAS-2B). 1 Reactive Reactive ADJ JJ Degree=Pos _ _ _ _ 2 oxygen oxygen ADJ JJ Degree=Pos _ _ _ _ 3 intermediate intermediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 release release NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 fibre fibre NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 exposed expose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 11 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 13 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 16 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 20 kinase kinase NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 co-cultured co-cultured ADJ JJ Degree=Pos _ _ _ _ 28 bronchial bronchial ADJ JJ Degree=Pos _ _ _ _ 29 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 BEAS beas NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4623 # text = Some pulmonary diseases like bronchitis or asthma bronchiale are mediated by inflammatory mechanisms in bronchial epithelial cells. 1 Some some DET DT _ _ _ _ _ 2 pulmonary pulmonary ADJ JJ Degree=Pos _ _ _ _ 3 diseases diseasis NOUN NNS Number=Plur _ _ _ _ 4 like like ADP IN _ _ _ _ _ 5 bronchitis bronchitis NOUN NN Number=Sing _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 asthma asthma NOUN NN Number=Sing _ _ _ _ 8 bronchiale bronchiale NOUN NNS Number=Plur _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 13 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 bronchial bronchial ADJ JJ Degree=Pos _ _ _ _ 16 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4624 # text = Alveolar macrophages are located directly in the surrounding of these cells, so that we suppose an interaction between epithelial cells and macrophages regarding to the release of inflammatory mediators. 1 Alveolar Alveolar ADJ JJ Degree=Pos _ _ _ _ 2 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 directly directly ADV RB _ _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 surrounding surrounding NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 so so SCONJ IN _ _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 16 suppose suppose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 interaction interaction NOUN NN Number=Sing _ _ _ _ 19 between between ADP IN _ _ _ _ _ 20 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 24 regarding regard VERB VBG VerbForm=Ger _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 release release NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 30 mediators mediator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4625 # text = For measuring the contribution of macrophages to the release of inflammatory mediators by bronchial epithelial cells, we established an in vitro model of co-cultured blood monocytes (BM) and BEAS-2B cells in a transwell system (Costar). 1 For for SCONJ IN _ _ _ _ _ 2 measuring measure VERB VBG VerbForm=Ger _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 contribution contribution NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 release release NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 12 mediators mediator NOUN NNS Number=Plur _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 bronchial bronchial ADJ JJ Degree=Pos _ _ _ _ 15 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 19 established establish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 vitro vitro NOUN NN Number=Sing _ _ _ _ 23 model model NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 co-cultured co-cultured ADJ JJ Degree=Pos _ _ _ _ 26 blood blood NOUN NN Number=Sing _ _ _ _ 27 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 BM BM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 BEAS BEAS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 2B 2B PROPN NNP Number=Sing _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 transwell transwell NOUN NN Number=Sing _ _ _ _ 39 system system NOUN NN Number=Sing _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 Costar Costar PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 4626 # text = BM were exposed to Chrysotile B and soot particle FR 101 in a concentration of 100 microg/10(6) cells. 1 BM Bm PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ _ 2 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 exposed expose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 Chrysotile Chrysotile PROPN NNP Number=Sing _ _ _ _ 6 B b PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 soot soot ADJ JJ Degree=Pos _ _ _ _ 9 particle particle NOUN NN Number=Sing _ _ _ _ 10 FR Fr ADP IN _ _ _ _ _ 11 101 101 NUM CD NumType=Card _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 concentration concentration NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 100 100 NUM CD NumType=Card _ _ _ _ 17 microg/10 microg/10 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4627 # text = After up to 90 min exposure time ELISA, EMSA (electromobility shift assay) and RT-PCR were used to measure protein tyrosine kinase activity, protein activity of NF-kappaB and cytokine (IL-1beta, IL-6, TNF-alpha) specific mRNA levels in BEAS-2B cells. 1 After after ADV RB _ _ _ _ _ 2 up up ADV RB _ _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 90 90 NUM CD NumType=Card _ _ _ _ 5 min min ADJ JJ Degree=Pos _ _ _ _ 6 exposure exposure NOUN NN Number=Sing _ _ _ _ 7 time time NOUN NN Number=Sing _ _ _ _ 8 ELISA ELISA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 EMSA EMSA PROPN NNP Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 electromobility electromobility NOUN NN Number=Sing _ _ _ _ 13 shift shift NOUN NN Number=Sing _ _ _ _ 14 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 RT Rt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 PCR PCR PROPN NNP Number=Sing _ _ _ _ 20 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 measure measure VERB VB VerbForm=Inf _ _ _ _ 24 protein protein NOUN NN Number=Sing _ _ _ _ 25 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 26 kinase kinase NOUN NN Number=Sing _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ _ 30 activity activity NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT , _ _ _ _ SpaceAfter=No 45 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ _ 51 specific specific ADJ JJ Degree=Pos _ _ _ _ 52 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 53 levels level NOUN NNS Number=Plur _ _ _ _ 54 in in ADP IN _ _ _ _ _ 55 BEAS BEAS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 56 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 57 2B 2b PROPN NNP Number=Sing _ _ _ _ 58 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 4628 # text = We observed an increase in protein tyrosine kinase activity (up to 1.8 +/- 0.5-fold) and NF-kappaB protein activity in BEAS-2B cells after particle or fibre exposure of co-cultured BM. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 increase increase NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 8 kinase kinase NOUN NN Number=Sing _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 up up ADP IN _ _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 1.8 1.8 NUM CD NumType=Card _ _ _ _ 14 +/- +/- SYM SYM _ _ _ _ _ 15 0.5 0.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 BEAS BEAS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 B b NOUN NN Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 after after ADP IN _ _ _ _ _ 32 particle particle NOUN NN Number=Sing _ _ _ _ 33 or or CCONJ CC _ _ _ _ _ 34 fibre fibre NOUN NN Number=Sing _ _ _ _ 35 exposure exposure NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 co-cultured co-cultured ADJ JJ Degree=Pos _ _ _ _ 38 BM BM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 4629 # text = Consecutive IL-1beta-, IL-6- and TNF-alpha-mRNA were elevated (up to 1.9 +/- 0.58-fold). 1 Consecutive Consecutive ADJ JJ Degree=Pos _ _ _ _ 2 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 alpha- alpha- PUNCT : _ _ _ _ SpaceAfter=No 16 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 17 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 elevated elevate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 up up ADP IN _ _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 1.9 1.9 NUM CD NumType=Card _ _ _ _ 23 +/- +/- SYM SYM _ _ _ _ _ 24 0.58 0.58 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4630 # text = Protein tyrosine kinase activity, NF-kappaB activity, and the synthesis of cytokine-specific mRNA were inhibited by antioxidants. 1 Protein protein NOUN NN Number=Sing _ _ _ _ 2 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 3 kinase kinase NOUN NN Number=Sing _ _ _ _ 4 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 19 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4631 # text = These data suggest a ROI-dependent NF-kappaB mediated transcription of inflammatory cytokines in bronchial epithelial cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 ROI Roi NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 11 mediated mediated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 15 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 bronchial bronchial ADJ JJ Degree=Pos _ _ _ _ 18 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4632 # text = Document 00300158 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300158 00300158 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4633 # text = Characterization of the human myeloid cell nuclear differentiation antigen gene promoter. 1 Characterization Characterization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 9 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4634 # text = MNDA (myeloid cell nuclear differentiation antigen) is an interferon alpha regulated nuclear protein expressed only in cells of the human myelomonocytic lineage. 1 MNDA MNDA PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 7 antigen antigen NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 interferon interferon ADJ JJ Degree=Pos _ _ _ _ 12 alpha alpha NOUN NN Number=Sing _ _ _ _ 13 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 only only ADV RB _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 myelomonocytic myelomonocytic ADJ JJ Degree=Pos _ _ _ _ 24 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4635 # text = To identify mechanisms responsible for this lineage-specific and interferon-regulated expression, the 5' flanking sequence of the gene has been characterized. 1 To to PART TO _ _ _ _ _ 2 identify identify VERB VB VerbForm=Inf _ _ _ _ 3 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 4 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 interferon interferon VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ' ' PUNCT `` _ _ _ _ _ 19 flanking flanking VERB VBG VerbForm=Ger _ _ _ _ 20 sequence sequence NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 26 characterized characterize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4636 # text = Two interferon-stimulated response elements (ISRE) flank a multiple transcription start site region identifying MNDA as a TATA-less interferon-regulated gene. 1 Two two NUM CD NumType=Card _ _ _ _ 2 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 response response NOUN NN Number=Sing _ _ _ _ 6 elements element NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 ISRE ISRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 flank flank VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 start start NOUN NN Number=Sing _ _ _ _ 15 site site NOUN NN Number=Sing _ _ _ _ 16 region region NOUN NN Number=Sing _ _ _ _ 17 identifying identify VERB VBG VerbForm=Ger _ _ _ _ 18 MNDA MNDa PROPN NNP Number=Sing _ _ _ _ 19 as as ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 TATA TATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 less less ADJ JJR Degree=Cmp _ _ _ _ 24 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4637 # text = Other DNA elements present include a cluster of Myb sites, several Ets, an Ets related PU.1 site and an Sp1 site located within 600 bp of the transcription start sites. 1 Other other ADJ JJ Degree=Pos _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ _ 3 elements element NOUN NNS Number=Plur _ _ _ _ 4 present present ADJ JJ Degree=Pos _ _ _ _ 5 include include VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 cluster cluster NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 Myb Myb NOUN NN Number=Sing _ _ _ _ 10 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 several several ADJ JJ Degree=Pos _ _ _ _ 13 Ets Et NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 Ets Ets PROPN NNPS Number=Plur _ _ _ _ 17 related related ADJ JJ Degree=Pos _ _ _ _ 18 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 19 site site NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 Sp1 sp1 NUM CD NumType=Card _ _ _ _ 23 site site NOUN NN Number=Sing _ _ _ _ 24 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 within within ADP IN _ _ _ _ _ 26 600 600 NUM CD NumType=Card _ _ _ _ 27 bp bp NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ _ 31 start start NOUN NN Number=Sing _ _ _ _ 32 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4638 # text = In addition, DNA methylation was revealed as one of the possible factors in establishing MNDA expression. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ _ 5 methylation methylation NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 revealed reveal VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 one one NUM CD NumType=Card _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 possible possible ADJ JJ Degree=Pos _ _ _ _ 13 factors factor NOUN NNS Number=Plur _ _ _ _ 14 in in SCONJ IN _ _ _ _ _ 15 establishing establish VERB VBG VerbForm=Ger _ _ _ _ 16 MNDA MNDA DET DT Definite=Ind|PronType=Art _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4639 # text = The 5' flanking sequence has promoter activity which is elevated by interferon alpha. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 ' ' PUNCT `` _ _ _ _ _ 4 flanking flanking NOUN NN Number=Sing _ _ _ _ 5 sequence sequence NOUN NN Number=Sing _ _ _ _ 6 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 promoter promoter ADJ JJ Degree=Pos _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 which which PRON WDT PronType=Rel _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 elevated elevate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 interferon interferon NOUN NN Number=Sing _ _ _ _ 14 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 4640 # text = The findings indicate that MNDA expression is regulated by mechanisms similar to other myelomonocytic cell specific genes and genes up-regulated by interferon alpha. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 MNDA MNDA PROPN NNP Number=Sing _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 11 similar similar ADJ JJ Degree=Pos _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 other other ADJ JJ Degree=Pos _ _ _ _ 14 myelomonocytic myelomonocytic ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 genes gene NOUN NNS Number=Plur _ _ _ _ 20 up up ADV RB _ _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 interferon interferon NOUN NN Number=Sing _ _ _ _ 25 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4641 # text = Document 00300160 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300160 00300160 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4642 # text = Mycobacterium tuberculosis mannose-capped lipoarabinomannan can induce NF-kappaB-dependent activation of human immunodeficiency virus type 1 long terminal repeat in T cells. 1 Mycobacterium Mycobacterium PROPN NNP Number=Sing _ _ _ _ 2 tuberculosis tuberculosis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 mannose mannose NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 capped cap ADJ JJ Degree=Pos _ _ _ _ 6 lipoarabinomannan lipoarabinomannan NOUN NN Number=Sing _ _ _ _ 7 can can AUX MD VerbForm=Fin _ _ _ _ 8 induce induce VERB VB VerbForm=Inf _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 18 virus virus NOUN NN Number=Sing _ _ _ _ 19 type type NOUN NN Number=Sing _ _ _ _ 20 1 1 NUM CD NumType=Card _ _ _ _ 21 long long ADJ JJ Degree=Pos _ _ _ _ 22 terminal terminal NOUN NN Number=Sing _ _ _ _ 23 repeat repeat VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4643 # text = Tuberculosis has emerged as an epidemic, extended by the large number of individuals infected with human immunodeficiency virus type 1 (HIV-1). 1 Tuberculosis Tuberculosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 emerged emerge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 as as ADP IN _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 epidemic epidemic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 extended extend VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 large large ADJ JJ Degree=Pos _ _ _ _ 12 number number NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 individuals individual NOUN NNS Number=Plur _ _ _ _ 15 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 19 virus virus NOUN NN Number=Sing _ _ _ _ 20 type type NOUN NN Number=Sing _ _ _ _ 21 1 1 NUM CD NumType=Card _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4644 # text = The major goal of this study was to determine whether the mycobacterial cell wall component mannose-capped lipoarabinomannan (ManLAM) of Mycobacterium tuberculosis (M. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 major major ADJ JJ Degree=Pos _ _ _ _ 3 goal goal NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 study study NOUN NN Number=Sing _ _ _ _ 7 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 determine determine VERB VB VerbForm=Inf _ _ _ _ 10 whether whether SCONJ IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 mycobacterial mycobacterial ADJ JJ Degree=Pos _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 wall wall NOUN NN Number=Sing _ _ _ _ 15 component component NOUN NN Number=Sing _ _ _ _ 16 mannose mannose NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 capped cap VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 lipoarabinomannan lipoarabinomannan NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 ManLAM ManLAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 Mycobacterium Mycobacterium PROPN NNP Number=Sing _ _ _ _ 25 tuberculosis tuberculosis PROPN NNPS Number=Plur _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 M. M. PROPN NNP Number=Sing _ _ _ _ # sent_id = 4645 # text = tuberculosis) could activate transcription of HIV-1 in T cells with the use of an in vitro cell culture system. 1 tuberculosis tuberculosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 ) ) PUNCT -RRB- _ _ _ _ _ 3 could could AUX MD VerbForm=Fin _ _ _ _ 4 activate activate VERB VB VerbForm=Inf _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 use use NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 vitro vitro NOUN NN Number=Sing _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 culture culture NOUN NN Number=Sing _ _ _ _ 22 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4646 # text = These experiments are of prime importance considering that CD4-expressing T lymphocytes represent the major virus reservoir in the peripheral blood of infected individuals. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 experiments experiment NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 prime prime ADJ JJ Degree=Pos _ _ _ _ 6 importance importance NOUN NN Number=Sing _ _ _ _ 7 considering consider VERB VBG VerbForm=Ger _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 -expressing -expresse VERB VBG VerbForm=Ger _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 13 represent represent VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 major major ADJ JJ Degree=Pos _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ _ 17 reservoir reservoir NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 21 blood blood NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 infected infect ADJ JJ Degree=Pos _ _ _ _ 24 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4647 # text = Using the 1G5 cell line harbouring the luciferase reporter gene under the control of the HIV-1 LTR, it was first found that culture protein filtrates (CFP) from M. tuberculosis or purified ManLAM could activate HIV-1 LTR-dependent gene expression unlike similarly prepared CFP extracts devoid of ManLAM. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 1G5 1G5 PROPN NNP Number=Sing _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 line line NOUN NN Number=Sing _ _ _ _ 6 harbouring harbour VERB VBG VerbForm=Ger _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 9 reporter reporter NOUN NN Number=Sing _ _ _ _ 10 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 under under ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 control control NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 LTR Ltr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 first first ADV RB _ _ _ _ _ 24 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 culture culture ADJ JJ Degree=Pos _ _ _ _ 27 protein protein NOUN NN Number=Sing _ _ _ _ 28 filtrates filtrate NOUN NNS Number=Plur _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 CFP CFP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 from from ADP IN _ _ _ _ _ 33 M. M. PROPN NNP Number=Sing _ _ _ _ 34 tuberculosis tuberculosis PROPN NNPS Number=Plur _ _ _ _ 35 or or CCONJ CC _ _ _ _ _ 36 purified purify ADJ JJ Degree=Pos _ _ _ _ 37 ManLAM ManLAm NOUN NN Number=Sing _ _ _ _ 38 could could AUX MD VerbForm=Fin _ _ _ _ 39 activate activate VERB VB VerbForm=Inf _ _ _ _ 40 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 1 1 X LS _ _ _ _ _ 43 LTR- LTR- X AFX _ _ _ _ SpaceAfter=No 44 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 45 gene gene NOUN NN Number=Sing _ _ _ _ 46 expression expression NOUN NN Number=Sing _ _ _ _ 47 unlike unlike ADP IN _ _ _ _ _ 48 similarly similarly ADV RB _ _ _ _ _ 49 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 CFP Cfp NOUN NN Number=Sing _ _ _ _ 51 extracts extract NOUN NNS Number=Plur _ _ _ _ 52 devoid devoid NOUN NN Number=Sing _ _ _ _ 53 of of ADP IN _ _ _ _ _ 54 ManLAM ManLAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 4648 # text = The implication of protein tyrosine kinase(s), protein kinase A and/or protein kinase C was highlighted by the abrogation of the ManLAM-mediated activation of HIV-1 LTR-driven gene expression using herbimycin A and H7. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 implication implication NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 6 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 s s X AFX _ _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 protein protein VERB VB VerbForm=Inf _ _ _ _ 12 kinase kinase NOUN NN Number=Sing _ _ _ _ 13 A a NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 or or CCONJ CC _ _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 kinase kinase NOUN NN Number=Sing _ _ _ _ 19 C c PROPN NNP Number=Sing _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 highlighted highlight VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 abrogation abrogation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 ManLAM ManLAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ _ 35 LTR- LTR- NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 gene gene NOUN NN Number=Sing _ _ _ _ 38 expression expression NOUN NN Number=Sing _ _ _ _ 39 using use VERB VBG VerbForm=Ger _ _ _ _ 40 herbimycin herbimycin NOUN NN Number=Sing _ _ _ _ 41 A a NOUN NN Number=Sing _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 H7 H7 NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 4649 # text = It was also determined, using electrophoresis mobility shift assays, that M. tuberculosis ManLAM led to the nuclear translocation of the transcription factor NF-kappaB. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 determined determined ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 using use VERB VBG VerbForm=Ger _ _ _ _ 7 electrophoresis electrophoresis DET DT Number=Sing|PronType=Dem _ _ _ _ 8 mobility mobility NOUN NN Number=Sing _ _ _ _ 9 shift shift NOUN NN Number=Sing _ _ _ _ 10 assays assays NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 M. M. PROPN NNP Number=Sing _ _ _ _ 14 tuberculosis tuberculosis PROPN NNP Number=Sing _ _ _ _ 15 ManLAM ManLAm PROPN NNP Number=Sing _ _ _ _ 16 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 translocation translocation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappaB. kappaB. PROPN NNP Number=Sing _ _ _ _ # sent_id = 4650 # text = M. tuberculosis ManLAM resulted in clear induction of the luciferase gene placed under the control of the wild-type, but not the kappaB-mutated, HIV-1 LTR region. 1 M. m. PROPN NNP Number=Sing _ _ _ _ 2 tuberculosis tuberculosis PROPN NNP Number=Sing _ _ _ _ 3 ManLAM ManLAm PROPN NNP Number=Sing _ _ _ _ 4 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 clear clear ADJ JJ Degree=Pos _ _ _ _ 7 induction induction NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 placed place VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 under under ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 control control NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 not not ADV RB _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 kappaB- kappab- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 LTR Ltr NOUN NN Number=Sing _ _ _ _ 32 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4651 # text = Finally, the ManLAM-mediated activation of HIV-1 LTR transcription was found to be independent of the autocrine or paracrine action of endogenous TNF-alpha. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 ManLAM ManLAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 LTR Ltr NOUN NN Number=Sing _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 independent independent ADJ JJ Degree=Pos _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 autocrine autocrine NOUN NN Number=Sing _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 paracrine paracrine NOUN NN Number=Sing _ _ _ _ 24 action action NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 27 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4652 # text = The results suggest that M. tuberculosis can upregulate HIV-1 expression in T cells and could thus have the potential to influence the pathogenesis of HIV-1 infection. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 M. M. PROPN NNP Number=Sing _ _ _ _ 6 tuberculosis tuberculosis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 7 can can AUX MD VerbForm=Fin _ _ _ _ 8 upregulate upregulate VERB VB VerbForm=Inf _ _ _ _ 9 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 could could AUX MD VerbForm=Fin _ _ _ _ 18 thus thus ADV RB _ _ _ _ _ 19 have have VERB VB VerbForm=Inf _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 potential potential NOUN NN Number=Sing _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 influence influence VERB VB VerbForm=Inf _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4653 # text = Document 00300166 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300166 00300166 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4654 # text = [Corticoids and allergy] 1 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 Corticoids Corticoid NOUN NNS Number=Plur _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 allergy allergy NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 4655 # text = Inflammation is constantly observed in allergic reactions. 1 Inflammation Inflammation NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 constantly constantly ADV RB _ _ _ _ _ 4 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 allergic allergic ADJ JJ Degree=Pos _ _ _ _ 7 reactions reaction NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 4656 # text = Corticosteroids are most effective in preventing the late phase of allergic reaction. 1 Corticosteroids Corticosteroid NOUN NNS Number=Plur _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 most most ADV RBS _ _ _ _ _ 4 effective effective ADJ JJ Degree=Pos _ _ _ _ 5 in in SCONJ IN _ _ _ _ _ 6 preventing prevent VERB VBG VerbForm=Ger _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 late late ADJ JJ Degree=Pos _ _ _ _ 9 phase phase NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 allergic allergic ADJ JJ Degree=Pos _ _ _ _ 12 reaction reaction NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 4657 # text = The action of glucocorticosteroids is mediated through glucocorticoid receptors present in the cellular cytoplasm. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 action action NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 glucocorticosteroids glucocorticosteroid NOUN NNS Number=Plur _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 through through ADP IN _ _ _ _ _ 8 glucocorticoid glucocorticoid VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 receptors receptor NOUN NNS Number=Plur _ _ _ _ 10 present present ADJ JJ Degree=Pos _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 14 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 4658 # text = When activated, glucocorticoid receptors form a dimer and bind to DNA after migration into the nucleus. 1 When when ADV WRB PronType=Int _ _ _ _ 2 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 glucocorticoid glucocorticoid VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 receptors receptor NOUN NNS Number=Plur _ _ _ _ 6 form from ADP IN Typo=Yes _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 dimer dimer NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 bind bind NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 DNA Dna NOUN NN Number=Sing _ _ _ _ 13 after after ADP IN _ _ _ _ _ 14 migration migration NOUN NN Number=Sing _ _ _ _ 15 into into ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4659 # text = Interaction to DNA induces changes in the transcription rate, leading to either gene induction or gene repression. 1 Interaction interaction NOUN NN Number=Sing _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 DNA Dna NOUN NN Number=Sing _ _ _ _ 4 induces induce NOUN NNS Number=Plur _ _ _ _ 5 changes change NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 rate rate NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 leading lead VERB VBG VerbForm=Ger _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 either either DET DT _ _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 induction induction NOUN NN Number=Sing _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 repression repression NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 4660 # text = Glucocorticoid receptors are also able to interact with transcriptional factors such as AP-1 (activator protein-1) of NF-kappa B (nuclear factor-kappa B). 1 Glucocorticoid Glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 2 receptors receptor NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 able able ADJ JJ Degree=Pos _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 interact interact VERB VB VerbForm=Inf _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ _ 11 such such ADJ JJ Degree=Pos _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 activator activator NOUN NN Number=Sing _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 X LS _ _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 29 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappa kappa NOUN NN Number=Sing _ _ _ _ 32 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4661 # text = Through these actions glucocorticosteroids are susceptible to modify functions of cells involved in the allergic inflammatory response. 1 Through through ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 actions action NOUN NNS Number=Plur _ _ _ _ 4 glucocorticosteroids glucocorticosteroid NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 susceptible susceptible ADJ JJ Degree=Pos _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 modify modify VERB VB VerbForm=Inf _ _ _ _ 9 functions function NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 involved involved VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 allergic allergic ADJ JJ Degree=Pos _ _ _ _ 16 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 17 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4662 # text = They are in particular able to inhibit most of the pro-inflammatory functions of the eosinophils. 1 They they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 particular particular ADJ JJ Degree=Pos _ _ _ _ 5 able able ADJ JJ Degree=Pos _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 8 most most ADJ JJS Degree=Sup _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 pro-inflammatory pro-inflammatory ADJ JJ Degree=Pos _ _ _ _ 12 functions function NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4663 # text = Document 00300167 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300167 00300167 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4664 # text = Alpha-lipoic acid is a potent inhibitor of NF-kappa B activation in human T cells. 1 Alpha Alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 lipoic lipoic ADJ JJ Degree=Pos _ _ _ _ 4 acid acid NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 potent potent NOUN NN Number=Sing _ _ _ _ 8 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4665 # text = Acquired immunodeficiency syndrome (AIDS) results from infection with a human immunodeficiency virus (HIV). 1 Acquired acquire ADJ JJ Degree=Pos _ _ _ _ 2 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 3 syndrome syndrome NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 AIDS aids NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 results result NOUN NNS Number=Plur _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 infection infection NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 14 virus virus NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4666 # text = The long terminal repeat (LTR) region of HIV proviral DNA contains binding sites for nuclear factor kappa B (NF-kappa B), and this transcriptional activator appears to regulate HIV activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 long long ADJ JJ Degree=Pos _ _ _ _ 3 terminal terminal NOUN NN Number=Sing _ _ _ _ 4 repeat repeat NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 region region NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 HIV HIV PROPN NNP Number=Sing _ _ _ _ 11 proviral proviral ADJ JJ Degree=Pos _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 sites site NOUN NNS Number=Plur _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 30 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 31 activator activator NOUN NN Number=Sing _ _ _ _ 32 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 to to PART TO _ _ _ _ _ 34 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 35 HIV HIV PROPN NNP Number=Sing _ _ _ _ 36 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 4667 # text = Recent findings suggest an involvement of reactive oxygen species (ROS) in signal transduction pathways leading to NF-kappa B activation. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 involvement involvement NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 8 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 9 species species NOUN NNS Number=Plur _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 ROS Ros X ADD _ _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 signal signal ADJ JJ Degree=Pos _ _ _ _ 15 transduction transduction NOUN NN Number=Sing _ _ _ _ 16 pathways pathway NOUN NNS Number=Plur _ _ _ _ 17 leading lead VERB VBG VerbForm=Ger _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa NOUN NN Number=Sing _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4668 # text = The present study was based on reports that antioxidants which eliminate ROS should block the activation of NF-kappa B and subsequently HIV transcription, and thus antioxidants can be used as therapeutic agents for AIDS. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 based base VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 reports report NOUN NNS Number=Plur _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 antioxidants antioxidant VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 which which PRON WDT PronType=Int _ _ _ _ 11 eliminate eliminate ADJ JJ Degree=Pos _ _ _ _ 12 ROS Ro NOUN NNS Number=Plur _ _ _ _ 13 should should AUX MD VerbForm=Fin _ _ _ _ 14 block block VERB VB VerbForm=Inf _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 subsequently subsequently ADV RB _ _ _ _ _ 24 HIV Hiv VERB VBP Abbr=Yes|Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 thus thus ADV RB _ _ _ _ _ 29 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ _ 30 can can AUX MD VerbForm=Fin _ _ _ _ 31 be be AUX VB VerbForm=Inf _ _ _ _ 32 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 as as ADP IN _ _ _ _ _ 34 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 35 agents agent NOUN NNS Number=Plur _ _ _ _ 36 for for ADP IN _ _ _ _ _ 37 AIDS aids NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 4669 # text = Incubation of Jurkat T cells (1 x 10(6) cells/ml) with a natural thiol antioxidant, alpha-lipoic acid, prior to the stimulation of cells was found to inhibit NF-kappa B activation induced by tumor necrosis factor-alpha (25 ng/ml) or by phorbol 12-myristate 13-acetate (50 ng/ml). 1 Incubation incubation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 4 T T PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 x x SYM SYM _ _ _ _ _ 9 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 ml ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 natural natural ADJ JJ Degree=Pos _ _ _ _ 20 thiol thiol NOUN NN Number=Sing _ _ _ _ 21 antioxidant antioxidant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 lipoic lipoic ADJ JJ Degree=Pos _ _ _ _ 26 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 prior prior ADJ JJ Degree=Pos _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ _ 34 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 35 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 to to PART TO _ _ _ _ _ 37 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 38 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 kappa kappa NOUN NN Number=Sing _ _ _ _ 41 B b NOUN NN Number=Sing _ _ _ _ 42 activation activation NOUN NN Number=Sing _ _ _ _ 43 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 by by ADP IN _ _ _ _ _ 45 tumor tumor NOUN NN Number=Sing _ _ _ _ 46 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 47 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 alpha alpha NOUN NN Number=Sing _ _ _ _ 50 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 51 25 25 NUM CD NumType=Card _ _ _ _ 52 ng ng NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 / / PUNCT , _ _ _ _ SpaceAfter=No 54 ml ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 ) ) PUNCT -RRB- _ _ _ _ _ 56 or or CCONJ CC _ _ _ _ _ 57 by by ADP IN _ _ _ _ _ 58 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 59 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 60 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 61 myristate myristate NOUN NN Number=Sing _ _ _ _ 62 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 63 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 64 acetate acetate NOUN NN Number=Sing _ _ _ _ 65 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 66 50 50 NUM CD NumType=Card _ _ _ _ 67 ng/ ng/ PUNCT HYPH _ _ _ _ SpaceAfter=No 68 ml ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 69 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 70 . . PUNCT . _ _ _ _ _ # sent_id = 4670 # text = The inhibitory action of alpha-lipoic acid was found to be very potent as only 4 mM was needed for a complete inhibition, whereas 20 mM was required for N-acetylcysteine. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 3 action action NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 lipoic lipoic ADJ JJ Degree=Pos _ _ _ _ 8 acid acid NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 very very ADV RB _ _ _ _ _ 14 potent potent ADJ JJ Degree=Pos _ _ _ _ 15 as as ADV RB _ _ _ _ _ 16 only only ADV RB _ _ _ _ _ 17 4 4 NUM CD NumType=Card _ _ _ _ 18 mM mm NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 needed need VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 complete complete ADJ JJ Degree=Pos _ _ _ _ 24 inhibition inhibition NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 whereas wherea SCONJ IN _ _ _ _ _ 27 20 20 NUM CD NumType=Card _ _ _ _ 28 mM mm NOUN NN Number=Sing _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 N- n- X GW _ _ _ _ SpaceAfter=No 33 acetylcysteine acetylcysteine PRON PRP _ _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4671 # text = These results indicate that alpha-lipoic acid may be effective in AIDS therapeutics. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 lipoic lipoic ADJ JJ Degree=Pos _ _ _ _ 8 acid acid NOUN NN Number=Sing _ _ _ _ 9 may may AUX MD VerbForm=Fin _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 effective effective ADJ JJ Degree=Pos _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 AIDS aids NOUN NN Number=Sing _ _ _ _ 14 therapeutics therapeutic NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4672 # text = Document 00300168 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300168 00300168 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4673 # text = Effects of glucocorticoids on transcription factor activation in human peripheral blood mononuclear cells. 1 Effects Effects NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 11 blood blood NOUN NN Number=Sing _ _ _ _ 12 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4674 # text = Glucocorticoids have an inhibitory effect on inflammatory and immune responses, and this may be through the modulation of transcription factor binding to DNA. 1 Glucocorticoids Glucocorticoid NOUN NNS Number=Plur _ _ _ _ 2 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 immune immune ADJ JJ Degree=Pos _ _ _ _ 10 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 through through ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 modulation modulation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 DNA Dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4675 # text = The interaction of the transcription factors, activator protein-1 (AP-1), nuclear factor kappa B (NF kappa B), and cAMP-responsive element binding protein (CREB) with DNA and glucocorticoid receptors (GR) was analyzed in human peripheral blood mononuclear cells by gel mobility shift assays. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 interaction interaction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 activator activator NOUN NN Number=Sing _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b PROPN NNP Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 NF Nf PROPN NNP Number=Sing _ _ _ _ 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ 25 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 32 element element NOUN NN Number=Sing _ _ _ _ 33 binding binding VERB VBG VerbForm=Ger _ _ _ _ 34 protein protein NOUN NN Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 with with ADP IN _ _ _ _ _ 39 DNA dna NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ _ 42 receptors receptor NOUN NNS Number=Plur _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 GR GR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ _ 46 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 47 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 human human ADJ JJ Degree=Pos _ _ _ _ 50 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 51 blood blood NOUN NN Number=Sing _ _ _ _ 52 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 53 cells cell NOUN NNS Number=Plur _ _ _ _ 54 by by ADP IN _ _ _ _ _ 55 gel gel NOUN NN Number=Sing _ _ _ _ 56 mobility mobility NOUN NN Number=Sing _ _ _ _ 57 shift shift NOUN NN Number=Sing _ _ _ _ 58 assays assays NOUN NNS Number=Plur _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 4676 # text = TNF-alpha, IL-1 beta and phorbol myristate acetate (PMA) treatment increased AP-1 and NF kappa B DNA binding by up to 200% but decreased CREB binding (38%) over a 60-min time course. 1 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 beta beta NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 11 myristate myristate NOUN NN Number=Sing _ _ _ _ 12 acetate acetate NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 treatment treatment NOUN NN Number=Sing _ _ _ _ 17 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ _ 23 kappa kappa PROPN NNP Number=Sing _ _ _ _ 24 B B PROPN NNP Number=Sing _ _ _ _ 25 DNA Dna PROPN NNP Number=Sing _ _ _ _ 26 binding bind VERB VBG VerbForm=Ger _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 up up NOUN NN Number=Sing _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 200 200 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 % % SYM NN Number=Sing _ _ _ _ 32 but but CCONJ CC _ _ _ _ _ 33 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 CREB Creb NOUN NN Number=Sing _ _ _ _ 35 binding binding VERB VBG VerbForm=Ger _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 38 38 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 over over ADP IN _ _ _ _ _ 41 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 60 60 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 min min NOUN NN Number=Sing _ _ _ _ 45 time time NOUN NN Number=Sing _ _ _ _ 46 course course NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 4677 # text = Dexamethasone produced a rapid and sustained increase in glucocorticoid response element binding and a concomitant 40-50% decrease in AP-1, NF kappa B, and CREB DNA binding that was blocked by combined dexamethasone and cytokine or PMA treatment. 1 Dexamethasone Dexamethasone PROPN NNP Number=Sing _ _ _ _ 2 produced produce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 sustained sustain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 increase increase NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 10 response response NOUN NN Number=Sing _ _ _ _ 11 element element NOUN NN Number=Sing _ _ _ _ 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 concomitant concomitant NOUN NN Number=Sing _ _ _ _ 16 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - SYM SYM _ _ _ _ SpaceAfter=No 18 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 % % SYM NN Number=Sing _ _ _ _ 20 decrease decrease NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ _ 27 kappa kappa PROPN NNP Number=Sing _ _ _ _ 28 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 CREB CREB NOUN NN Number=Sing _ _ _ _ 32 DNA Dna NOUN NN Number=Sing _ _ _ _ 33 binding binding VERB VBG VerbForm=Ger _ _ _ _ 34 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 35 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 36 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 by by ADP IN _ _ _ _ _ 38 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 42 or or CCONJ CC _ _ _ _ _ 43 PMA Pma DET DT Definite=Ind|PronType=Art _ _ _ _ 44 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 4678 # text = These latter effects were due to increases in the nuclear localization of GR, not to reduced amounts of the other transcription factors. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 latter latter ADJ JJ Degree=Pos _ _ _ _ 3 effects effect NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 due due ADP IN _ _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 increases increase NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 localization localization NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 GR GR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 not not ADV RB _ _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 reduced reduce VERB VB VerbForm=Inf _ _ _ _ 18 amounts amount NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 other other ADJ JJ Degree=Pos _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4679 # text = This suggests that in these cells GR within the nucleus interacts with cytokine-stimulated transcription factors by the process of cross coupling. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 GR Gr VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 within within ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 nucleus nucleus ADJ JJ Degree=Pos _ _ _ _ 11 interacts interacts NOUN NNS Number=Plur _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factors factor NOUN NNS Number=Plur _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 process process NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 cross cross NOUN NN Number=Sing _ _ _ _ 23 coupling coupling NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4680 # text = This may be an important molecular site of steroid action. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 may may AUX MD VerbForm=Fin _ _ _ _ 3 be be AUX VB VerbForm=Inf _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 important important ADJ JJ Degree=Pos _ _ _ _ 6 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 7 site site NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 steroid steroid ADJ JJ Degree=Pos _ _ _ _ 10 action action NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4681 # text = Document 00300178 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300178 00300178 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4682 # text = Helenalin, an anti-inflammatory sesquiterpene lactone from Arnica, selectively inhibits transcription factor NF-kappaB [see comments] 1 Helenalin Helenalin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 5 sesquiterpene sesquiterpene NOUN NN Number=Sing _ _ _ _ 6 lactone lactone NOUN NN Number=Sing _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 Arnica Arnica PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 selectively selectively ADV RB _ _ _ _ _ 11 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 17 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 see see VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 comments comment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 4683 # text = Alcoholic extracts prepared form Arnicae flos, the collective name for flowerheads from Arnica montana and A. 1 Alcoholic Alcoholic ADJ JJ Degree=Pos _ _ _ _ 2 extracts extract NOUN NNS Number=Plur _ _ _ _ 3 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 form from NOUN NN Number=Sing _ _ _ _ 5 Arnicae Arnicae NOUN NN Number=Sing _ _ _ _ 6 flos flo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 collective collective ADJ JJ Degree=Pos _ _ _ _ 10 name name NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 flowerheads flowerhead NOUN NNS Number=Plur _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 Arnica Arnica PROPN NNP Number=Sing _ _ _ _ 15 montana montana PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 A A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4684 # text = chamissonis ssp. foliosa, are used therapeutically as anti-inflammatory remedies. 1 chamissonis chamissonis NOUN NN Number=Sing _ _ _ _ 2 ssp. ssp. NOUN NN Number=Sing _ _ _ _ 3 foliosa foliosa NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 therapeutically therapeutically ADV RB _ _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 10 remedies remedy NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 4685 # text = The active ingredients mediating the pharmacological effect are mainly sesquiterpene lactones, such as helenalin, 11alpha,13-dihydrohelenalin, chamissonolid and their ester derivatives. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 active active ADJ JJ Degree=Pos _ _ _ _ 3 ingredients ingredient NOUN NNS Number=Plur _ _ _ _ 4 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 pharmacological pharmacological ADJ JJ Degree=Pos _ _ _ _ 7 effect effect NOUN NN Number=Sing _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 mainly mainly ADV RB _ _ _ _ _ 10 sesquiterpene sesquiterpene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 lactones lactone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 such such ADJ JJ Degree=Pos _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 helenalin helenalin NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 11alpha,13 11alpha,13 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 dihydrohelenalin dihydrohelenalin NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 chamissonolid chamissonolid NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 ester ester NOUN NN Number=Sing _ _ _ _ 25 derivatives derivative NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4686 # text = While these compounds affect various cellular processes, current data do not fully explain how sesquiterpene lactones exert their anti-inflammatory effect. 1 While while SCONJ IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 compounds compound NOUN NNS Number=Plur _ _ _ _ 4 affect affect VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 various various ADJ JJ Degree=Pos _ _ _ _ 6 cellular cellular NOUN NN Number=Sing _ _ _ _ 7 processes process NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 current current ADJ JJ Degree=Pos _ _ _ _ 10 data data NOUN NN Number=Sing _ _ _ _ 11 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 fully fully ADV RB _ _ _ _ _ 14 explain explain VERB VB VerbForm=Inf _ _ _ _ 15 how how ADV WRB PronType=Int _ _ _ _ 16 sesquiterpene sesquiterpene NOUN NN Number=Sing _ _ _ _ 17 lactones lactone NOUN NNS Number=Plur _ _ _ _ 18 exert exert ADP IN Typo=Yes _ _ _ _ 19 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 21 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4687 # text = We show here that helenalin, and, to a much lesser degree, 11alpha,13-dihydrohelenalin and chamissonolid, inhibit activation of transcription factor NF-kappaB. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 helenalin helenalin NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 much much ADJ JJ Degree=Pos _ _ _ _ 12 lesser lesser NOUN NN Number=Sing _ _ _ _ 13 degree degree NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 11alpha,13 11alpha,13 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 -dihydrohelenalin -dihydrohelenalin NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 chamissonolid chamissonolid NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 inhibit inhibit NOUN NN Number=Sing _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4688 # text = This difference in efficacy, which correlates with the compounds' anti-inflammatory potency in vivo, may be explained by differences in structure and conformation. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 difference difference NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 efficacy efficacy NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 compounds compound NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 ' 's PART POS _ _ _ _ _ 12 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 13 potency potency NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 may may AUX MD VerbForm=Fin _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 explained explain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 differences difference NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 structure structure NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 conformation conformation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4689 # text = NF-kappaB, which resides in an inactive, cytoplasmic complex in unstimulated cells, is activated by phosphorylation and degradation of its inhibitory subunit, IkappaB. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 which which PRON WDT PronType=Rel _ _ _ _ 6 resides reside VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 inactive inactive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 12 complex complex NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 degradation degradation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 25 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 26 subunit subunit NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4690 # text = Helenalin inhibits NF-kappaB activation in response to four different stimuli in T-cells, B-cells and epithelial cells and abrogates kappaB-driven gene expression. 1 Helenalin Helenalin PROPN NNP Number=Sing _ _ _ _ 2 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 response response NOUN NN Number=Sing _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 four four NUM CD NumType=Card _ _ _ _ 11 different different ADJ JJ Degree=Pos _ _ _ _ 12 stimuli stimuli NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 abrogates abrogate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4691 # text = This inhibition is selective, as the activity of four other transcription factors, Oct-1, TBP, Sp1 and STAT 5 was not affected. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 selective selective ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 as as SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 four four NUM CD NumType=Card _ _ _ _ 11 other other ADJ JJ Degree=Pos _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 TBP TBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 STAT STAT PROPN NNP Number=Sing _ _ _ _ 23 5 5 NUM CD NumType=Card _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 not not PART RB _ _ _ _ _ 26 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4692 # text = We show that inhibition is not due to a direct modification of the active NF-kappaB heterodimer. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 due due ADP IN _ _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 direct direct ADJ JJ Degree=Pos _ _ _ _ 11 modification modification NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 active active ADJ JJ Degree=Pos _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 18 heterodimer heterodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 4693 # text = Rather, helenalin modifies the NF-kappaB/IkappaB complex, preventing the release of IkappaB. 1 Rather Rather ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 helenalin helenalin ADP IN _ _ _ _ _ 4 modifies modify NOUN NNS Number=Plur _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 10 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ _ 11 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 preventing prevent VERB VBG VerbForm=Ger _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 release release NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4694 # text = These data suggest a molecular mechanism for the anti-inflammatory effect of sesquiterpene lactones, which differs from that of other nonsteroidal anti-inflammatory drugs (NSAIDs), indomethacin and acetyl salicylic acid. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 6 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 10 effect effect NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 sesquiterpene sesquiterpene NOUN NN Number=Sing _ _ _ _ 13 lactones lactone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 differs differ VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 other other ADJ JJ Degree=Pos _ _ _ _ 21 nonsteroidal nonsteroidal ADJ JJ Degree=Pos _ _ _ _ 22 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 23 drugs drug NOUN NNS Number=Plur _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 NSAIDs NSAid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 indomethacin indomethacin ADJ JJ Degree=Pos _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 acetyl acetyl ADJ JJ Degree=Pos _ _ _ _ 31 salicylic salicylic ADJ JJ Degree=Pos _ _ _ _ 32 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4695 # text = Document 00300181 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300181 00300181 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4696 # text = Competent transcription initiation by RNA polymerase II in cell-free extracts from xeroderma pigmentosum groups B and D in an optimized RNA transcription assay. 1 Competent Competent ADJ JJ Degree=Pos _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 initiation initiation NOUN NN Number=Sing _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 RNA RNA PROPN NNP Number=Sing _ _ _ _ 6 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 7 II ii NUM CD NumType=Card _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 free free ADJ JJ Degree=Pos _ _ _ _ 12 extracts extract NOUN NNS Number=Plur _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 xeroderma xeroderma NOUN NN Number=Sing _ _ _ _ 15 pigmentosum pigmentosum NOUN NN Number=Sing _ _ _ _ 16 groups group NOUN NNS Number=Plur _ _ _ _ 17 B b PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 D d PROPN NNP Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 optimized optimized ADJ JJ Degree=Pos _ _ _ _ 23 RNA RNa NOUN NN Number=Sing _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4697 # text = The human autosomal recessive disease, xeroderma pigmentosum (XP), can result from mutations in any one of seven genes, designated XPA through XPG. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 autosomal autosomal ADJ JJ Degree=Pos _ _ _ _ 4 recessive recessive ADJ JJ Degree=Pos _ _ _ _ 5 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 xeroderma xeroderma NOUN NN Number=Sing _ _ _ _ 8 pigmentosum pigmentosum NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 XP XP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 can can AUX MD VerbForm=Fin _ _ _ _ 14 result result VERB VB VerbForm=Inf _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 mutations mutation NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 any any DET DT _ _ _ _ _ 19 one one NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 seven seven NUM CD NumType=Card _ _ _ _ 22 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 XPA XPA PROPN NNP Number=Sing _ _ _ _ 26 through through ADP IN _ _ _ _ _ 27 XPG XPG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4698 # text = Of these, the XPB and XPD genes encode proteins that are subunits of a general transcription factor, TFIIH, involved in both nucleotide excision repair (NER) and initiation of mRNA transcription by RNA polymerase II. 1 Of of ADP IN _ _ _ _ _ 2 these these PRON DT Number=Plur|PronType=Dem _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 XPB XPB PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 XPD XPD PROPN NNP Number=Sing _ _ _ _ 8 genes gene VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 encode encode NOUN NN Number=Sing _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 subunits subunit NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 general general ADJ JJ Degree=Pos _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 TFIIH TFIIh INTJ UH _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 involved involved ADJ JJ Degree=Pos _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 both both DET DT _ _ _ _ _ 25 nucleotide nucleotide ADJ JJ Degree=Pos _ _ _ _ 26 excision excision NOUN NN Number=Sing _ _ _ _ 27 repair repair NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 NER NER PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 initiation initiation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 35 transcription transcription NOUN NN Number=Sing _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 RNA RNA PROPN NNP Number=Sing _ _ _ _ 38 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 39 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 4699 # text = In humans, mutation of the XPB or XPD gene impairs NER, resulting in hyper-sensitivity to sunlight and greatly increased skin tumor formation. 1 In in ADP IN _ _ _ _ _ 2 humans human NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 mutation mutation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 XPB XPB PROPN NNP Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 XPD XPD AUX MD VerbForm=Fin _ _ _ _ 10 gene gene VERB VB VerbForm=Inf _ _ _ _ 11 impairs impairs ADV RB _ _ _ _ _ 12 NER ner ADV RBR Degree=Cmp _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 resulting result VERB VBG VerbForm=Ger _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 hyper hyper NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 sunlight sunlight NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 greatly greatly ADV RB _ _ _ _ _ 23 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 skin skin NOUN NN Number=Sing _ _ _ _ 25 tumor tumor NOUN NN Number=Sing _ _ _ _ 26 formation formation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4700 # text = However, no transcription deficiency has been demonstrated in either XP-B or XP-D. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 no no DET DT _ _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 deficiency deficiency NOUN NN Number=Sing _ _ _ _ 6 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 either either DET DT _ _ _ _ _ 11 XP XP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 B B PROPN NNP Number=Sing _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 XP XP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 D D PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4701 # text = We have employed an optimized cell-free RNA transcription assay to analyze transcription activity of XP-B and XP-D. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 employed employ VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 optimized optimized VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 free free ADJ JJ Degree=Pos _ _ _ _ 9 RNA RNa NOUN NN Number=Sing _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 assay assay NOUN NN Number=Sing _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 analyze analyze VERB VB VerbForm=Inf _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 XP XP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 B B PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 XP XP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 D D PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4702 # text = Although the growth rate was normal, the XP-B and XP-D cells contained reduced amounts of TFIIH. 1 Although although SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 growth growth NOUN NN Number=Sing _ _ _ _ 4 rate rate NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 normal normal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 XP Xp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 B b PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 XP Xp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 D d PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 amounts amount NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 TFIIH TFIIH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4703 # text = Extracts prepared from XP-B and XP-D lymphoblastoid cells exhibited similar transcription activity from the adenovirus major late promoter when compared to that in extracts from normal cells. 1 Extracts Extract NOUN NNS Number=Plur _ _ _ _ 2 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 XP XP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 B b PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 XP Xp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 D d PROPN NNP Number=Sing _ _ _ _ 11 lymphoblastoid lymphoblastoid ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 exhibited exhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 similar similar ADJ JJ Degree=Pos _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 adenovirus adenovirus NOUN NN Number=Sing _ _ _ _ 20 major major ADJ JJ Degree=Pos _ _ _ _ 21 late late ADJ JJ Degree=Pos _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ _ 23 when when ADV WRB PronType=Int _ _ _ _ 24 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 extracts extract NOUN NNS Number=Plur _ _ _ _ 29 from from ADP IN _ _ _ _ _ 30 normal normal ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4704 # text = Thus, we conclude that the XP-B and XP-D lymphoblastoid cells do not have impaired RNA transcription activity. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 XP Xp NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 B b NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 XP Xp NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 D d NOUN NN Number=Sing _ _ _ _ 14 lymphoblastoid lymphoblastoid NOUN NN Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 not not PART RB _ _ _ _ _ 18 have have AUX VB VerbForm=Inf _ _ _ _ 19 impaired impaire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 RNA RNA PROPN NNP Number=Sing _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4705 # text = We consider the possible consequences of the reduced cellular content of TFIIH for the clinical symptoms in XP-B or XP-D patients, and discuss a 'conditional phenotype' that may involve an impairment of cellular function only under certain growth conditions. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 consider consider VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 possible possible ADJ JJ Degree=Pos _ _ _ _ 5 consequences consequence NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 10 content content NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 TFIIH TFIIh PROPN NNP Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 16 symptoms symptom NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 XP XP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 B b PROPN NNP Number=Sing _ _ _ _ 21 or or CCONJ CC _ _ _ _ _ 22 XP Xp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 D d PROPN NNP Number=Sing _ _ _ _ 25 patients patient NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 discuss discuss VERB VB VerbForm=Inf _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 31 conditional conditional ADJ JJ Degree=Pos _ _ _ _ 32 phenotype phenotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 ' ' PUNCT '' _ _ _ _ _ 34 that that PRON WDT PronType=Rel _ _ _ _ 35 may may AUX MD VerbForm=Fin _ _ _ _ 36 involve involve VERB VB VerbForm=Inf _ _ _ _ 37 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 impairment impairment NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 41 function function NOUN NN Number=Sing _ _ _ _ 42 only only ADV RB _ _ _ _ _ 43 under under ADP IN _ _ _ _ _ 44 certain certain ADJ JJ Degree=Pos _ _ _ _ 45 growth growth NOUN NN Number=Sing _ _ _ _ 46 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4706 # text = Document 00300187 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300187 00300187 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4707 # text = Targeted remodeling of human beta-globin promoter chromatin structure produces increased expression and decreased silencing. 1 Targeted target VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 remodeling remodeling NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 globin globin NOUN NN Number=Sing _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 10 structure structure NOUN NN Number=Sing _ _ _ _ 11 produces produce NOUN NNS Number=Plur _ _ _ _ 12 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 silencing silencing NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4708 # text = The chromatin structure of the human beta-globin gene locus assumes a transcriptionally-active conformation in erythroid cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 3 structure structure NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 globin globin NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 locus locus NOUN NN Number=Sing _ _ _ _ 12 assumes assume VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 transcriptionally transcriptionally ADV RB _ _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 active active ADJ JJ Degree=Pos _ _ _ _ 17 conformation conformation NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4709 # text = One feature of this chromatin reorganization is the formation of DNase 1 hypersensitive sites in the regions of active globin gene promoters. 1 One one NUM CD NumType=Card _ _ _ _ 2 feature feature NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 6 reorganization reorganization NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 formation formation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 DNase DNase NOUN NN Number=Sing _ _ _ _ 12 1 1 NUM CD NumType=Card _ _ _ _ 13 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 14 sites site NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 regions region NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 active active ADJ JJ Degree=Pos _ _ _ _ 20 globin globin ADJ JJ Degree=Pos _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4710 # text = This reorganization requires the globin locus control region and is associated with normal expression of the beta-like globin genes. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 reorganization reorganization NOUN NN Number=Sing _ _ _ _ 3 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 globin globin NOUN NN Number=Sing _ _ _ _ 6 locus locus CCONJ CC _ _ _ _ _ 7 control control NOUN NN Number=Sing _ _ _ _ 8 region region NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 normal normal ADJ JJ Degree=Pos _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 like like SCONJ IN _ _ _ _ _ 20 globin globin NOUN NN Number=Sing _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4711 # text = To determine whether it is possible to artificially enhance the opening of the chromatin structure of a minimal beta-globin promoter, we placed a 101bp, erythroid-specific DNase 1 hypersensitive site-forming element (HSFE) immediately upstream of the beta-globin promoter and gene. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 possible possible ADJ JJ Degree=Pos _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 artificially artificially ADV RB _ _ _ _ _ 9 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 opening opening NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 15 structure structure NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 19 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 globin globin NOUN NN Number=Sing _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 25 placed place VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 101 101 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 bp bp NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 specific specific ADJ JJ Degree=Pos _ _ _ _ 33 DNase DNase NOUN NN Number=Sing _ _ _ _ 34 1 1 NUM CD NumType=Card _ _ _ _ 35 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 36 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 forming forming VERB VBG VerbForm=Ger _ _ _ _ 39 element element NOUN NN Number=Sing _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 HSFE HSFE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 immediately immediately ADV RB _ _ _ _ _ 44 upstream upstream NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 globin globin NOUN NN Number=Sing _ _ _ _ 50 promoter promoter NOUN NN Number=Sing _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 4712 # text = This element includes binding sites for NF-E2, AP-1, GATA-1 and Sp-1. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 element element NOUN NN Number=Sing _ _ _ _ 3 includes include VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 sites site NOUN NNS Number=Plur _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 E2 e2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 GATA GATA NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 Sp sp NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4713 # text = Constructs were stably transfected into murine erythroleukemia cells and promoter chromatin structure and gene expression were analyzed. 1 Constructs Construct NOUN NNS Number=Plur _ _ _ _ 2 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 stably stably ADV RB _ _ _ _ _ 4 transfected transfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 into into ADP IN _ _ _ _ _ 6 murine murine PRON PRP _ _ _ _ _ 7 erythroleukemia erythroleukemia ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 promoter promoter VERB VB VerbForm=Inf _ _ _ _ 11 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 12 structure structure NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4714 # text = The HSFE induced an area of enhanced DNase 1 hypersensitivity extending from the transcriptional start site to -300bp of the artificial promoter and significantly increased the proportion of beta-globin promoters in an open chromatin configuration. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 HSFE HSFE PROPN NNP Number=Sing _ _ _ _ 3 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 area area NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 DNase DNase NOUN NN Number=Sing _ _ _ _ 9 1 1 NUM CD NumType=Card _ _ _ _ 10 hypersensitivity hypersensitivity NOUN NN Number=Sing _ _ _ _ 11 extending extend VERB VBG VerbForm=Ger _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 15 start start NOUN NN Number=Sing _ _ _ _ 16 site site NOUN NN Number=Sing _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 - - SYM SYM _ _ _ _ SpaceAfter=No 19 300 300 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 bp bp NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 artificial artificial ADJ JJ Degree=Pos _ _ _ _ 24 promoter promoter NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 significantly significantly ADV RB _ _ _ _ _ 27 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 proportion proportion NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 globin globin NOUN NN Number=Sing _ _ _ _ 34 promoters promoter NOUN NNS Number=Plur _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 open open ADJ JJ Degree=Pos _ _ _ _ 38 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 39 configuration configuration NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 4715 # text = This remodeling of promoter chromatin structure resulted in 3-fold increases in beta-globin gene transcription and induction, and inhibited long-term beta-globin gene silencing. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 remodeling remodeling NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 promoter promoter NOUN NN Number=Sing _ _ _ _ 5 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 6 structure structure NOUN NN Number=Sing _ _ _ _ 7 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 fold fold VERB VB VerbForm=Inf _ _ _ _ 12 increases increase NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 globin globin NOUN NN Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 long long ADV RB Degree=Pos _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 term term NOUN NN Number=Sing _ _ _ _ 27 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 globin globin NOUN NN Number=Sing _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ _ 31 silencing silencing VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4716 # text = These results indicate that a relatively small cis-acting element is able to enhance remodeling of promoter chromatin structure resulting in increased beta-globin gene expression. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 relatively relatively ADV RB _ _ _ _ _ 7 small small ADJ JJ Degree=Pos _ _ _ _ 8 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 -acting -acting NOUN NN Number=Sing _ _ _ _ 10 element element NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 able able ADJ JJ Degree=Pos _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 15 remodeling remodeling NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 19 structure structure NOUN NN Number=Sing _ _ _ _ 20 resulting result VERB VBG VerbForm=Ger _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 globin globin NOUN NN Number=Sing _ _ _ _ 26 gene gene NOUN NN Number=Sing _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4717 # text = Document 00300191 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300191 00300191 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4718 # text = Transcriptional control of steroid-regulated apoptosis in murine thymoma cells. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 control control NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 steroid steroid VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 murine murine ADJ JJ Degree=Pos _ _ _ _ 10 thymoma thymoma NOUN NN Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4719 # text = Early studies in murine T cell lines indicated that transcriptional transactivation functions encoded in the glucocorticoid receptor (GR) 1 Early Early ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 murine murine ADJ JJ Degree=Pos _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 lines line NOUN NNS Number=Plur _ _ _ _ 8 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 12 functions function NOUN NNS Number=Plur _ _ _ _ 13 encoded encod VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 GR GR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ # sent_id = 4720 # text = N-terminal domain are required for glucocorticoid-mediated apoptosis. 1 N- N- SYM NFP _ _ _ _ SpaceAfter=No 2 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 3 domain domain NOUN NN Number=Sing _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 glucocorticoid glucocorticoid VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 4721 # text = However, more recent studies in human T cell lines have suggested that the N-terminal domain is not necessary for steroid-regulated apoptosis and that GR-mediated transrepression may be the more critical mechanism. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 more more ADV RBR _ _ _ _ _ 4 recent recent ADJ JJ Degree=Pos _ _ _ _ 5 studies study NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 T T PROPN NNP Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 lines line NOUN NNS Number=Plur _ _ _ _ 11 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 suggested suggest VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 N- n- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 terminal terminal NOUN NN Number=Sing _ _ _ _ 17 domain domain NOUN NN Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 steroid steroid VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 that that SCONJ IN _ _ _ _ _ 28 GR Gr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 transrepression transrepression NOUN NN Number=Sing _ _ _ _ 32 may may AUX MD VerbForm=Fin _ _ _ _ 33 be be AUX VB VerbForm=Inf _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 more more ADV RBR _ _ _ _ _ 36 critical critical ADJ JJ Degree=Pos _ _ _ _ 37 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 4722 # text = To better understand the contribution of the GR N-terminal transactivation domain in mediating murine thymocyte apoptosis, we stably transfected GR, GR variants, and the androgen receptor (AR) into receptor-negative S49 murine thymoma cells. 1 To to ADV RB _ _ _ _ _ 2 better better ADV RBR Degree=Cmp _ _ _ _ 3 understand understand VERB VB VerbForm=Inf _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 contribution contribution NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 GR Gr PROPN NNP Number=Sing _ _ _ _ 9 N- N- SYM NFP _ _ _ _ SpaceAfter=No 10 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 11 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 12 domain domain NOUN NN Number=Sing _ _ _ _ 13 in in SCONJ IN _ _ _ _ _ 14 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 15 murine murine PRON PRP _ _ _ _ _ 16 thymocyte thymocyte NOUN NN Number=Sing _ _ _ _ 17 apoptosis apoptosis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 20 stably stably ADV RB _ _ _ _ _ 21 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 GR Gr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 GR Gr PROPN NNP Number=Sing _ _ _ _ 25 variants variant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 androgen androgen ADJ JJ Degree=Pos _ _ _ _ 30 receptor receptor NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 AR be NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 into into ADP IN _ _ _ _ _ 35 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 negative negative ADJ JJ Degree=Pos _ _ _ _ 38 S49 s49 NOUN NN Number=Sing _ _ _ _ 39 murine murine NOUN NN Number=Sing _ _ _ _ 40 thymoma thymoma ADP IN _ _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 4723 # text = GR expression levels were shown to be rate-limiting for initiating the apoptotic pathway, and a positive correlation between steroid sensitivity and GR-mediated induction of an integrated mouse mammary tumor virus (MMTV) LTR reporter gene was observed. 1 GR Gr ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 levels level NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 rate rate NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 limiting limit NOUN NN Number=Sing _ _ _ _ 11 for for SCONJ IN _ _ _ _ _ 12 initiating initiat VERB VBG VerbForm=Ger _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 15 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 positive positive ADJ JJ Degree=Pos _ _ _ _ 20 correlation correlation NOUN NN Number=Sing _ _ _ _ 21 between between ADP IN _ _ _ _ _ 22 steroid steroid ADJ JJ Degree=Pos _ _ _ _ 23 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 GR Gr NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 induction induction NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 integrated integrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 mouse mouse NOUN NN Number=Sing _ _ _ _ 33 mammary mammary NOUN NN Number=Sing _ _ _ _ 34 tumor tumor NOUN NN Number=Sing _ _ _ _ 35 virus virus NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 MMTV MMTV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 LTR Ltr ADJ JJ Degree=Pos _ _ _ _ 40 reporter reporter NOUN NN Number=Sing _ _ _ _ 41 gene gene NOUN NN Number=Sing _ _ _ _ 42 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 43 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 4724 # text = Analysis of GR chimeric receptors containing the potent VP16 and E1A viral transactivation domains in place of the GR N terminus revealed that even low level expression of these receptors resulted in both enhanced steroid sensitivity and MMTV induction, thus supporting a role for transactivation in apoptosis. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 GR Gr ADJ JJ Degree=Pos _ _ _ _ 4 chimeric chimeric NOUN NN Number=Sing _ _ _ _ 5 receptors receptor NOUN NNS Number=Plur _ _ _ _ 6 containing contain VERB VBG VerbForm=Ger _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 potent potent NOUN NN Number=Sing _ _ _ _ 9 VP16 VP16 PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 E1 E1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 viral viral ADJ JJ Degree=Pos _ _ _ _ 14 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 15 domains domain NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 place place NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 GR GR PROPN NNP Number=Sing _ _ _ _ 21 N N PROPN NNP Number=Sing _ _ _ _ 22 terminus terminus NOUN NN Number=Sing _ _ _ _ 23 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 even even ADV RB _ _ _ _ _ 26 low low ADJ JJ Degree=Pos _ _ _ _ 27 level level NOUN NN Number=Sing _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 31 receptors receptor NOUN NNS Number=Plur _ _ _ _ 32 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 both both CCONJ CC _ _ _ _ _ 35 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 steroid steroid ADJ JJ Degree=Pos _ _ _ _ 37 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 MMTV Mmtv NOUN NN Number=Sing _ _ _ _ 40 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 thus thus ADV RB _ _ _ _ _ 43 supporting support VERB VBG VerbForm=Ger _ _ _ _ 44 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 45 role role NOUN NN Number=Sing _ _ _ _ 46 for for ADP IN _ _ _ _ _ 47 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 4725 # text = In contrast, we found that AR can initiate apoptosis in S49 cells after treatment with 5 alpha-dihydrotestosterone, despite its relative inability to induce high level expression of MMTV. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 AR ar PROPN NNP Number=Sing _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 initiate initiate VERB VB VerbForm=Inf _ _ _ _ 10 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 S49 S49 NUM CD NumType=Card _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 after after ADP IN _ _ _ _ _ 15 treatment treatment NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 5 5 NUM CD NumType=Card _ _ _ _ 18 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 dihydrotestosterone dihydrotestosterone NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 despite despite ADP IN _ _ _ _ _ 23 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 relative relative ADJ JJ Degree=Pos _ _ _ _ 25 inability inability NOUN NN Number=Sing _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 induce induce VERB VB VerbForm=Inf _ _ _ _ 28 high high ADJ JJ Degree=Pos _ _ _ _ 29 level level NOUN NN Number=Sing _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 MMTV MMTV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4726 # text = To investigate this further, we examined the steroid-regulated expression of an endogenous thymocyte-specific gene called GIG18. 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 4 further further ADV RB _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 steroid steroid NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 16 thymocyte thymocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 specific specific ADJ JJ Degree=Pos _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ _ 20 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 GIG18 GIG18 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4727 # text = We found that GIG18 was rapidly induced to comparable levels by both AR and GR, demonstrating that AR can indeed function as a transcriptional activator in S49 cells and, moreover, that GIG18 induction may be a marker of early apoptotic events in steroid-treated cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 GIG18 GIG18 PROPN NNP Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 rapidly rapidly ADV RB _ _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 comparable comparable ADJ JJ Degree=Pos _ _ _ _ 10 levels level NOUN NNS Number=Plur _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 both both DET DT _ _ _ _ _ 13 AR be NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 GR GR NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 demonstrating demonstrat VERB VBG VerbForm=Ger _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 AR be PROPN NNP Number=Sing _ _ _ _ 20 can can AUX MD VerbForm=Fin _ _ _ _ 21 indeed indeed ADV RB _ _ _ _ _ 22 function function VERB VB VerbForm=Inf _ _ _ _ 23 as as ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 26 activator activator NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 S49 S49 PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 moreover moreover ADV RB _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 35 GIG18 Gig18 NOUN NN Number=Sing _ _ _ _ 36 induction induction NOUN NN Number=Sing _ _ _ _ 37 may may AUX MD VerbForm=Fin _ _ _ _ 38 be be AUX VB VerbForm=Inf _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 marker marker NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 early early ADJ JJ Degree=Pos _ _ _ _ 43 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 44 events event NOUN NNS Number=Plur _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 steroid steroid VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 49 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 4728 # text = Taken together, these results support our conclusion that transcriptional transactivation is a necessary signaling component of S49 cell apoptosis, although an additional role for GR-mediated transrepression cannot be excluded. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 support support VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 8 conclusion conclusion NOUN NN Number=Sing _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 15 signaling signaling NOUN NN Number=Sing _ _ _ _ 16 component component NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 S49 S49 NUM CD NumType=Card _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 although although SCONJ IN _ _ _ _ _ 23 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 additional additional ADJ JJ Degree=Pos _ _ _ _ 25 role role NOUN NN Number=Sing _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 GR GR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 mediated mediate ADJ JJ Degree=Pos _ _ _ _ 30 transrepression transrepression NOUN NN Number=Sing _ _ _ _ 31 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 32 not not PART RB _ _ _ _ _ 33 be be AUX VB VerbForm=Inf _ _ _ _ 34 excluded exclude VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4729 # text = Document 00300192 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300192 00300192 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4730 # text = RFLAT-1: a new zinc finger transcription factor that activates RANTES gene expression in T lymphocytes. 1 RFLAT Rflat ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 new new ADJ JJ Degree=Pos _ _ _ _ 7 zinc zinc NOUN NN Number=Sing _ _ _ _ 8 finger finger NOUN NN Number=Sing _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 RANTES Rante VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 gene gene ADJ JJ Degree=Pos _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4731 # text = RANTES (Regulated upon Activation, Normal T cell Expressed and Secreted) is a chemoattractant cytokine (chemokine) important in the generation of inflammatory infiltrate and human immunodeficiency virus entry into immune cells. 1 RANTES RANTES INTJ UH _ _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 Regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 upon upon ADP IN _ _ _ _ _ 5 Activation Activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 Normal normal PROPN NNP Number=Sing _ _ _ _ 8 T T PROPN NNP Number=Sing _ _ _ _ 9 cell cell PROPN NNP Number=Sing _ _ _ _ 10 Expressed express PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 Secreted Secret PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 chemoattractant chemoattractant NOUN NN Number=Sing _ _ _ _ 17 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 chemokine chemokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 important important ADJ JJ Degree=Pos _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 generation generation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 27 infiltrate infiltrate ADJ JJ Degree=Pos _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 31 virus virus NOUN NN Number=Sing _ _ _ _ 32 entry entry NOUN NN Number=Sing _ _ _ _ 33 into into ADP IN _ _ _ _ _ 34 immune immune ADJ JJ Degree=Pos _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 4732 # text = RANTES is expressed late (3-5 days) after activation in T lymphocytes. 1 RANTES RANTES PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 late late ADJ JJ Degree=Pos _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 5 5 NUM CD NumType=Card _ _ _ _ 9 days day NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 after after ADP IN _ _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4733 # text = Using expression cloning, we identified the first "late" T lymphocyte associated transcription factor and named it "RANTES Factor of Late Activated T Lymphocytes-1" (RFLAT-1). 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 cloning cloning NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 9 " " PUNCT `` _ _ _ _ SpaceAfter=No 10 late late ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 " " PUNCT '' _ _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 14 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 named nam VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 it it PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 20 " " PUNCT `` _ _ _ _ SpaceAfter=No 21 RANTES rantes PROPN NNP Number=Sing _ _ _ _ 22 Factor factor PROPN NNP Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 Late Late PROPN NNP Number=Sing _ _ _ _ 25 Activated activate PROPN NNP Number=Sing _ _ _ _ 26 T t PROPN NNP Number=Sing _ _ _ _ 27 Lymphocytes Lymphocyte PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 " " NOUN NNS Number=Plur _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 RFLAT RFLAT NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 4734 # text = RFLAT-1 is a novel, phosphorylated, zinc finger transcription factor that is expressed in T cells 3 days after activation, coincident with RANTES expression. 1 RFLAT Rflat ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 novel novel NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 zinc zinc NOUN NN Number=Sing _ _ _ _ 11 finger finger NOUN NN Number=Sing _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 3 3 NUM CD NumType=Card _ _ _ _ 21 days day NOUN NNS Number=Plur _ _ _ _ 22 after after ADP IN _ _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 coincident coincident NOUN NN Number=Sing _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 RANTES rantes NOUN NN Number=Sing _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4735 # text = While Rel proteins play the dominant role in RANTES gene expression in fibroblasts, RFLAT-1 is a strong transactivator for RANTES in T cells. 1 While while SCONJ IN _ _ _ _ _ 2 Rel Rel PROPN NNP Number=Sing _ _ _ _ 3 proteins protein NOUN NNS Number=Plur _ _ _ _ 4 play play VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 RANTES RANTES PROPN NNP Number=Sing _ _ _ _ 10 gene gene PROPN NNP Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 RFLAT RFLAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 strong strong ADJ JJ Degree=Pos _ _ _ _ 21 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 RANTES Rante PROPN NNP Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4736 # text = Document 00300194 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300194 00300194 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4737 # text = Infection and replication of Tat- human immunodeficiency viruses: genetic analyses of LTR and tat mutations in primary and long-term human lymphoid cells. 1 Infection Infection NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 replication replication NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Tat Tat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 9 viruses viruse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 : : PUNCT : _ _ _ _ _ 11 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 12 analyses analysis NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 LTR Ltr NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 tat tat NOUN NN Number=Sing _ _ _ _ 17 mutations mutation NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 primary primary ADJ JJ Degree=Pos _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 term term NOUN NN Number=Sing _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4738 # text = Tat is an essential regulatory protein for the replication of human immunodeficiency virus (HIV). 1 Tat Tat PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 essential essential ADJ JJ Degree=Pos _ _ _ _ 5 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 replication replication NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 13 virus virus NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4739 # text = Mutations in the tat gene have been shown to block HIV replication in human T cells. 1 Mutations Mutation NOUN NNS Number=Plur _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 tat tat NOUN NN Number=Sing _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 block block VERB VB VerbForm=Inf _ _ _ _ 11 HIV HIV PROPN NNP Number=Sing _ _ _ _ 12 replication replication NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4740 # text = Several studies have established that Tat releases an elongation block to the transcription of HIV long terminal repeat (LTR); however, it is not known whether this mechanism alone is sufficient to explain the block to HIV replication in human T cells when Tat is absent. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 established establish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 Tat Tat PROPN NNP Number=Sing _ _ _ _ 7 releases release VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 elongation elongation NOUN NN Number=Sing _ _ _ _ 10 block block NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 HIV HIV PROPN NNP Number=Sing _ _ _ _ 16 long long ADJ JJ Degree=Pos _ _ _ _ 17 terminal terminal NOUN NN Number=Sing _ _ _ _ 18 repeat repeat NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 ; ; PUNCT , _ _ _ _ _ 23 however however ADV RB _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 26 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 not not PART RB _ _ _ _ _ 28 known known VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 whether whether SCONJ IN _ _ _ _ _ 30 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 31 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 32 alone alone ADV RB _ _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 explain explain VERB VB VerbForm=Inf _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 block block NOUN NN Number=Sing _ _ _ _ 39 to to ADP IN _ _ _ _ _ 40 HIV HIV PROPN NNP Number=Sing _ _ _ _ 41 replication replication NOUN NN Number=Sing _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 human human ADJ JJ Degree=Pos _ _ _ _ 44 T t PROPN NNP Number=Sing _ _ _ _ 45 cells cell NOUN NNS Number=Plur _ _ _ _ 46 when when ADV WRB PronType=Int _ _ _ _ 47 Tat Tat PROPN NNP Number=Sing _ _ _ _ 48 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 49 absent absend VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 4741 # text = It is possible that Tat is also needed for other functions during HIV replication. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 possible possible ADJ JJ Degree=Pos _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Tat Tat PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 needed need VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 other other ADJ JJ Degree=Pos _ _ _ _ 11 functions function NOUN NNS Number=Plur _ _ _ _ 12 during during ADP IN _ _ _ _ _ 13 HIV HIV NOUN NN Number=Sing _ _ _ _ 14 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 4742 # text = To test these hypotheses, we studied several tat mutants, including two stop codon mutants and one deletion mutant using replication-competent HIV-1 constructs carrying wild-type or mutant LTRs with modifications in the NF-kappa B and/or Sp1 binding sites. 1 To to PART TO _ _ _ _ _ 2 test test VERB VB VerbForm=Inf _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 hypotheses hypothese NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 several several ADJ JJ Degree=Pos _ _ _ _ 9 tat tat NOUN NN Number=Sing _ _ _ _ 10 mutants mutant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 including include VERB VBG VerbForm=Ger _ _ _ _ 13 two two NUM CD NumType=Card _ _ _ _ 14 stop stop NOUN NN Number=Sing _ _ _ _ 15 codon codon NOUN NN Number=Sing _ _ _ _ 16 mutants mutant NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 one one NUM CD NumType=Card _ _ _ _ 19 deletion deletion NOUN NN Number=Sing _ _ _ _ 20 mutant mutant NOUN NN Number=Sing _ _ _ _ 21 using use VERB VBG VerbForm=Ger _ _ _ _ 22 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 competent competent NOUN NN Number=Sing _ _ _ _ 25 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 constructs construct NOUN NNS Number=Plur _ _ _ _ 29 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 30 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 type type NOUN NN Number=Sing _ _ _ _ 33 or or CCONJ CC _ _ _ _ _ 34 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 35 LTRs LTR NOUN NNS Number=Plur _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 modifications modification NOUN NNS Number=Plur _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 kappa kappa NOUN NN Number=Sing _ _ _ _ 43 B b NOUN NN Number=Sing _ _ _ _ 44 and and CCONJ CC _ _ _ _ SpaceAfter=No 45 / / PUNCT , _ _ _ _ SpaceAfter=No 46 or or CCONJ CC _ _ _ _ _ 47 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 48 binding bind VERB VBG VerbForm=Ger _ _ _ _ 49 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 4743 # text = In this study, we show that Tat- HIV-1 with wild-type LTRs can replicate in HeLa cells, and the virus produced from HeLa cells can infect primary peripheral blood lymphocytes and macrophages. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 Tat Tat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ _ 10 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 type type NOUN NN Number=Sing _ _ _ _ 17 LTRs LTR NOUN NNS Number=Plur _ _ _ _ 18 can can AUX MD VerbForm=Fin _ _ _ _ 19 replicate replicate VERB VB VerbForm=Inf _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 virus virus NOUN NN Number=Sing _ _ _ _ 27 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 from from ADP IN _ _ _ _ _ 29 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 can can AUX MD VerbForm=Fin _ _ _ _ 32 infect infect VERB VB VerbForm=Inf _ _ _ _ 33 primary primary ADJ JJ Degree=Pos _ _ _ _ 34 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 35 blood blood NOUN NN Number=Sing _ _ _ _ 36 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 4744 # text = It was found that the propagation of the Tat mutants containing wild-type LTRs was less efficient than that of the LTR-modified Tat mutants. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 propagation propagation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 Tat Tat PROPN NNP Number=Sing _ _ _ _ 10 mutants mutant PROPN NNPS Number=Plur _ _ _ _ 11 containing contain VERB VBG VerbForm=Ger _ _ _ _ 12 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 type type NOUN NN Number=Sing _ _ _ _ 15 LTRs LTR PROPN NNP Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 less less ADV RBR Degree=Cmp _ _ _ _ 18 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 19 than than ADP IN _ _ _ _ _ 20 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 LTR- ltr- NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 modified modify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 Tat Tat PROPN NNP Number=Sing _ _ _ _ 26 mutants mutant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4745 # text = Large amounts of viral RNA and particles were synthesized in infections established using the tat mutants that contain modified LTRs. 1 Large large ADJ JJ Degree=Pos _ _ _ _ 2 amounts amount NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 viral viral ADJ JJ Degree=Pos _ _ _ _ 5 RNA RNa NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 particles particle NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 synthesized synthesize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 infections infection NOUN NNS Number=Plur _ _ _ _ 12 established establish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 using use VERB VBG VerbForm=Ger _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 tat tat NOUN NN Number=Sing _ _ _ _ 16 mutants mutant NOUN NNS Number=Plur _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 modified modify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 LTRs LTR NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4746 # text = However, this efficient propagation of the LTR-modified tat mutants was restricted to some lymphoid cell lines that have been transformed with other viruses. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 5 propagation propagation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 LTR- LTR- NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 modified modify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 tat tat NOUN NN Number=Sing _ _ _ _ 11 mutants mutant NOUN NNS Number=Plur _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 restricted restrict VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 some some DET DT _ _ _ _ _ 16 lymphoid lymphoid VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 lines line NOUN NNS Number=Plur _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 22 transformed transform VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 other other ADJ JJ Degree=Pos _ _ _ _ 25 viruses virus NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4747 # text = Thus, despite its essential role for releasing an elongation block, Tat is not otherwise absolutely required for synthesis of full-length HIV transcripts and assembly of virus particles. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 despite despite ADP IN _ _ _ _ _ 4 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 5 essential essential ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 for for SCONJ IN _ _ _ _ _ 8 releasing release VERB VBG VerbForm=Ger _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 elongation elongation NOUN NN Number=Sing _ _ _ _ 11 block block NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 Tat Tat PROPN NNP Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 otherwise otherwise ADV RB _ _ _ _ _ 17 absolutely absolutely ADV RB _ _ _ _ _ 18 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 full full ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 length length NOUN NN Number=Sing _ _ _ _ 25 HIV Hiv NOUN NN Number=Sing _ _ _ _ 26 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 assembly assembly NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 virus virus NOUN NN Number=Sing _ _ _ _ 31 particles particle NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4748 # text = Direct sequencing of the viral genomes and reinfection kinetics showed no evidence of wild-type reversion even after prolonged infection with the Tat- virus. 1 Direct direct ADJ JJ Degree=Pos _ _ _ _ 2 sequencing sequencing NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 viral viral ADJ JJ Degree=Pos _ _ _ _ 6 genomes genome NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 reinfection reinfection NOUN NN Number=Sing _ _ _ _ 9 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 10 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 no no DET DT _ _ _ _ _ 12 evidence evidence NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 type type NOUN NN Number=Sing _ _ _ _ 17 reversion reversion NOUN NN Number=Sing _ _ _ _ 18 even even ADV RB _ _ _ _ _ 19 after after ADP IN _ _ _ _ _ 20 prolonged prolonge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 infection infection NOUN NN Number=Sing _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 Tat Tat NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ _ 26 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4749 # text = The implications for in vivo HIV-1 replication and potential application of this system to the study of alternative Tat function are discussed. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 implications implication NOUN NNS Number=Plur _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 vivo vivo PROPN NNP Number=Sing _ _ _ _ 6 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 replication replication NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 potential potential ADJ JJ Degree=Pos _ _ _ _ 12 application application NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 15 system system NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 study study NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 21 Tat Tat NOUN NN Number=Sing _ _ _ _ 22 function function NOUN NN Number=Sing _ _ _ _ 23 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 discussed discuss VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4750 # text = Document 00300195 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300195 00300195 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4751 # text = The human prointerleukin 1 beta gene requires DNA sequences both proximal and distal to the transcription start site for tissue-specific induction. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 prointerleukin prointerleukin NOUN NN Number=Sing _ _ _ _ 4 1 1 NUM CD NumType=Card _ _ _ _ 5 beta beta NOUN NN Number=Sing _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 DNA dna NOUN NN Number=Sing _ _ _ _ 9 sequences sequence NOUN NNS Number=Plur _ _ _ _ 10 both both CCONJ CC _ _ _ _ _ 11 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 distal distal ADJ JJ Degree=Pos _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 start start NOUN NN Number=Sing _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 tissue- tissue- SYM NFP _ _ _ _ SpaceAfter=No 21 specific specific ADJ JJ Degree=Pos _ _ _ _ 22 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4752 # text = In these studies, we have identified DNA sequences and specific protein interactions necessary for transcriptional regulation of the human prointerleukin 1 beta (proIL-1 beta) gene. 1 In in ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 DNA dna NOUN NN Number=Sing _ _ _ _ 9 sequences sequence NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 specific specific ADJ JJ Degree=Pos _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 interactions interaction NOUN NNS Number=Plur _ _ _ _ 14 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 17 regulation regulation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 prointerleukin prointerleukin NOUN NN Number=Sing _ _ _ _ 22 1 1 NUM CD NumType=Card _ _ _ _ 23 beta beta NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 proIL proil NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4753 # text = A cell-type-independent lipopolysaccharide (LPS)-responsive enhancer element located between -3757 and -2729 bp upstream from the transcription start site (cap site) consisted of at least six discrete subregions which were essential to the maximal induction by LPS in transfected monocytes. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 independent independent ADJ JJ Degree=Pos _ _ _ _ 7 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 - - PUNCT : _ _ _ _ SpaceAfter=No 12 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 13 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 14 element element NOUN NN Number=Sing _ _ _ _ 15 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 between between ADP IN _ _ _ _ _ 17 -3757 -3757 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 - - SYM SYM _ _ _ _ SpaceAfter=No 20 2729 2729 NUM CD NumType=Card _ _ _ _ 21 bp bp NOUN NN Number=Sing _ _ _ _ 22 upstream upstream NOUN NN Number=Sing _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 start start NOUN NN Number=Sing _ _ _ _ 27 site site NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 cap cap NOUN NN Number=Sing _ _ _ _ 30 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 consisted consist VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 at at ADV RB _ _ _ _ _ 35 least least ADV RBS Degree=Sup _ _ _ _ 36 six six NUM CD NumType=Card _ _ _ _ 37 discrete discrete NOUN NN Number=Sing _ _ _ _ 38 subregions subregion NOUN NNS Number=Plur _ _ _ _ 39 which which PRON WDT PronType=Rel _ _ _ _ 40 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 41 essential essential ADJ JJ Degree=Pos _ _ _ _ 42 to to ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 45 induction induction NOUN NN Number=Sing _ _ _ _ 46 by by ADP IN _ _ _ _ _ 47 LPS Lp NOUN NNS Number=Plur _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 4754 # text = The enhancer also appeared to mediate phorbol myristate acetate induction in monocytes and IL-1 responsiveness in fibroblasts. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 7 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 8 myristate myristate NOUN NN Number=Sing _ _ _ _ 9 acetate acetate NOUN NN Number=Sing _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4755 # text = Deletion and base substitution mutations along with DNA binding studies demonstrated that the enhancer contained a minimum of three functional protein binding sequences, two of which appeared to be important for gene induction. 1 Deletion Deletion NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 base base NOUN NN Number=Sing _ _ _ _ 4 substitution substitution NOUN NN Number=Sing _ _ _ _ 5 mutations mutation NOUN NNS Number=Plur _ _ _ _ 6 along along ADP IN _ _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 DNA dna NOUN NN Number=Sing _ _ _ _ 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 studies study NOUN NNS Number=Plur _ _ _ _ 11 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 15 contained contain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 minimum minimum NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 three three NUM CD NumType=Card _ _ _ _ 20 functional functional ADJ JJ Degree=Pos _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ _ 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 two two NUM CD NumType=Card _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 which which PRON WDT PronType=Rel _ _ _ _ 28 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 to to PART TO _ _ _ _ _ 30 be be AUX VB VerbForm=Inf _ _ _ _ 31 important important ADJ JJ Degree=Pos _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 gene gene ADJ JJ Degree=Pos _ _ _ _ 34 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4756 # text = One of the essential proteins which bound to the enhancer was similar or identical to members of the C/EBP family of transcription factors required for both IL-1- and LPS-specific induction of the IL-6 gene (i.e., the NF-IL6 proteins). 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 essential essential ADJ JJ Degree=Pos _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 bound bound VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 similar similar ADJ JJ Degree=Pos _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 identical identical ADJ JJ Degree=Pos _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 members member NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 21 EBP EBP PROPN NNP Number=Sing _ _ _ _ 22 family family NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 factors factor NOUN NNS Number=Plur _ _ _ _ 26 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 both both DET DT _ _ _ _ _ 29 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 LPS Lps PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 specific specific ADJ JJ Degree=Pos _ _ _ _ 36 induction induction NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 6 6 NUM CD NumType=Card _ _ _ _ 42 gene gene NOUN NN Number=Sing _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 i.e. i.e. X FW _ _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 IL6 IL6 PROPN NNP Number=Sing _ _ _ _ 50 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 4757 # text = When ligated to the proIL-1 beta cap site-proximal region (located between -131 to +12), both the proIL-1 beta and the simian virus 40 enhancer elements functioned more efficiently in monocytes than in HeLa cells, which are not normally competent for IL-1 beta expression. 1 When when ADV WRB PronType=Int _ _ _ _ 2 ligated ligate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 proIL proil NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 beta beta NOUN NN Number=Sing _ _ _ _ 9 cap cap NOUN NN Number=Sing _ _ _ _ 10 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 proximal proximal NOUN NN Number=Sing _ _ _ _ 13 region region NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 between between ADP IN _ _ _ _ _ 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 131 131 NUM CD NumType=Card _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 +12 +12 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 both both CCONJ CC _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 proIL proil NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 beta beta NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 simian simian ADJ JJ Degree=Pos _ _ _ _ 32 virus virus NOUN NN Number=Sing _ _ _ _ 33 40 40 NUM CD NumType=Card _ _ _ _ 34 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 35 elements element NOUN NNS Number=Plur _ _ _ _ 36 functioned function VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 more more ADV RBR _ _ _ _ _ 38 efficiently efficiently ADV RB _ _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 41 than than ADP IN _ _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 which which PRON WDT PronType=Rel _ _ _ _ 47 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 48 not not PART RB _ _ _ _ _ 49 normally normally ADV RB _ _ _ _ _ 50 competent competent ADJ JJ Degree=Pos _ _ _ _ 51 for for ADP IN _ _ _ _ _ 52 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT , _ _ _ _ SpaceAfter=No 54 1 1 NUM CD NumType=Card _ _ _ _ 55 beta beta NOUN NN Number=Sing _ _ _ _ 56 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 4758 # text = When ligated to the murine c-fos promoter, however, the proIL-1 beta enhancer was inducible in phorbol myristate acetate-stimulated HeLa cells, suggesting the existence of a proIL-1 beta promoter-proximal requirement for tissue specificity. 1 When when ADV WRB PronType=Int _ _ _ _ 2 ligated ligate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 murine murine NOUN NN Number=Sing _ _ _ _ 6 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 fos fo NOUN NNS Number=Plur _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 however however ADV RB _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 proIL proil NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 beta beta NOUN NN Number=Sing _ _ _ _ 18 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 23 myristate myristate NOUN NN Number=Sing _ _ _ _ 24 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 existence existence NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 proIL proil NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ _ 38 beta beta NOUN NN Number=Sing _ _ _ _ 39 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 proximal proximal NOUN NN Number=Sing _ _ _ _ 42 requirement requirement NOUN NN Number=Sing _ _ _ _ 43 for for ADP IN _ _ _ _ _ 44 tissue tissue NOUN NN Number=Sing _ _ _ _ 45 specificity specificity NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4759 # text = Document 00300197 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 00300197 00300197 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4760 # text = Interaction of HTLV-I Tax with the human proteasome: implications for NF-kappa B induction. 1 Interaction interaction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 Tax tax PROPN NNP Number=Sing _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 proteasome proteasome NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 : : PUNCT : _ _ _ _ _ 12 implications implication NOUN NNS Number=Plur _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4761 # text = The human T-cell leukemia virus type I (HTLV-I) has been etiologically associated with the development of the adult T-cell leukemia (ATL) as well as degenerative neurologic syndrome termed tropical spastic paraparesis (TSP). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 type type NOUN NN Number=Sing _ _ _ _ 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 16 etiologically etiologically ADV RB _ _ _ _ _ 17 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 development development NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 adult adult NOUN NN Number=Sing _ _ _ _ 24 T- T- PUNCT , _ _ _ _ SpaceAfter=No 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 ATL ATL INTJ UH _ _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 as as ADV RB _ _ _ _ _ 31 well well ADV RB Degree=Pos _ _ _ _ 32 as as ADP IN _ _ _ _ _ 33 degenerative degenerative ADJ JJ Degree=Pos _ _ _ _ 34 neurologic neurologic ADJ JJ Degree=Pos _ _ _ _ 35 syndrome syndrome NOUN NN Number=Sing _ _ _ _ 36 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 tropical tropical ADJ JJ Degree=Pos _ _ _ _ 38 spastic spastic ADJ JJ Degree=Pos _ _ _ _ 39 paraparesis paraparesis NOUN NN Number=Sing _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 TSP TSP NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 4762 # text = HTLV-I encodes a potent transactivator protein termed Tax that appears to play an important role in the process of T-cell immortalization. 1 HTLV Htlv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 4 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 potent potent NOUN NN Number=Sing _ _ _ _ 7 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 8 protein protein ADV WRB PronType=Rel _ _ _ _ 9 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 Tax Tax NOUN NN Number=Sing _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 play play VERB VB VerbForm=Inf _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 important important ADJ JJ Degree=Pos _ _ _ _ 17 role role NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 process process NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 immortalization immortalization NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4763 # text = Even though the mechanisms by which Tax induces transformation are still unknown, it seems likely that the ability of Tax to alter the expression of many cellular genes plays an important part in this process. 1 Even even ADV RB _ _ _ _ _ 2 though though SCONJ IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 which which DET WDT PronType=Int _ _ _ _ 7 Tax tax NOUN NN Number=Sing _ _ _ _ 8 induces induce NOUN NNS Number=Plur _ _ _ _ 9 transformation transformation NOUN NN Number=Sing _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 still still ADV RB _ _ _ _ _ 12 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 15 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 likely likely ADJ JJ Degree=Pos _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 ability ability NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 Tax tax PROPN NNP Number=Sing _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 alter alter VERB VB VerbForm=Inf _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 many many ADJ JJ Degree=Pos _ _ _ _ 28 cellular celular ADJ JJ Degree=Pos _ _ _ _ 29 genes gene NOUN NNS Number=Plur _ _ _ _ 30 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 important important ADJ JJ Degree=Pos _ _ _ _ 33 part part NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 36 process process NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 4764 # text = Tax does not bind directly to DNA but rather deregulates the activity of cellular transcription factors. 1 Tax tax NOUN NN Number=Sing _ _ _ _ 2 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 not not PART RB _ _ _ _ _ 4 bind bind VERB VB VerbForm=Inf _ _ _ _ 5 directly directly ADV RB _ _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 DNA Dna NOUN NN Number=Sing _ _ _ _ 8 but but CCONJ CC _ _ _ _ _ 9 rather rather ADV RB _ _ _ _ _ 10 deregulates deregulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4765 # text = One family of host transcription factors whose activity is altered by Tax includes NF-kappa B/Rel. 1 One one NUM CD NumType=Card _ _ _ _ 2 family family NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 host host NOUN NN Number=Sing _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factors factor NOUN NNS Number=Plur _ _ _ _ 7 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 altered alter VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 Tax tax PROPN NNP Number=Sing _ _ _ _ 13 includes include VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa PROPN NNP Number=Sing _ _ _ _ 17 B benefit PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 / / PUNCT , _ _ _ _ SpaceAfter=No 19 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4766 # text = These transcription factors are post-transcriptionally regulated by their assembly with a second family of inhibitory proteins termed I kappa B that serve to sequester the NF-kappa B/Rel complexes in the cytoplasm. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 post post VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 6 -transcriptionally -transcriptionally ADV RB _ _ _ _ _ 7 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 10 assembly assembly NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 14 family family NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 17 proteins protein NOUN NNS Number=Plur _ _ _ _ 18 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 20 kappa kappa PROPN NNP Number=Sing _ _ _ _ 21 B b PROPN NNP Number=Sing _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 serve serve VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 sequester sequester VERB VB VerbForm=Inf _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 / / PUNCT , _ _ _ _ SpaceAfter=No 32 Rel Rel NOUN NN Number=Sing _ _ _ _ 33 complexes complex NOUN NNS Number=Plur _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 4767 # text = Upon cellular activation, I kappa B alpha is phosphorylated, polyubiquitinated, and degraded in the proteasome. 1 Upon upon ADP IN _ _ _ _ _ 2 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 kappa kappa X FW Foreign=Yes _ _ _ _ 7 B b ADJ JJ Degree=Pos _ _ _ _ 8 alpha alpha NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 polyubiquitinated polyubiquitinate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 degraded degrad VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 proteasome proteasome NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 4768 # text = This proteolytic event liberates NF-kappa B, permitting its rapid translocation into the nucleus where it binds to its cognate enhancer elements. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 proteolytic proteolytic ADJ JJ Degree=Pos _ _ _ _ 3 event event NOUN NN Number=Sing _ _ _ _ 4 liberates liberate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 permitting permitt VERB VBG VerbForm=Ger _ _ _ _ 11 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 12 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 13 translocation translocation NOUN NN Number=Sing _ _ _ _ 14 into into ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 17 where where ADV WRB PronType=Rel _ _ _ _ 18 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 19 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 22 cognate cognate ADJ JJ Degree=Pos _ _ _ _ 23 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 24 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4769 # text = Similarly, the p105 precursor of the NF-kappa B p50 subunit is also post-translationally processed in the proteasome. 1 Similarly similarly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 p105 p105 NOUN NN Number=Sing _ _ _ _ 5 precursor precursor NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 p50 p50 NUM CD NumType=Card _ _ _ _ 13 subunit subunit NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 also also ADV RB _ _ _ _ _ 16 post post X AFX _ _ _ _ SpaceAfter=No 17 -translationally -translationally ADV RB _ _ _ _ _ 18 processed process VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 proteasome proteasome NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4770 # text = The mechanisms by which Tax activates NF-kappa B remain unclear, and findings presented in the literature are often controversial. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 Tax tax PROPN NNP Number=Sing _ _ _ _ 6 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B b PROPN NNP Number=Sing _ _ _ _ 11 remain remain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 unclear unclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 findings finding NOUN NNS Number=Plur _ _ _ _ 16 presented present VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 literature literature NOUN NN Number=Sing _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 often often ADV RB _ _ _ _ _ 22 controversial controversial ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4771 # text = We identified a physical interaction between Tax and the HsN3 subunit of the human proteasome. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 physical physical ADJ JJ Degree=Pos _ _ _ _ 5 interaction interaction NOUN NN Number=Sing _ _ _ _ 6 between between ADP IN _ _ _ _ _ 7 Tax Tax NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 HsN3 HsN3 NOUN NN Number=Sing _ _ _ _ 11 subunit subunit NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 proteasome proteasome NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4772 # text = This raises the intriguing possibility that physical association of the HsN3 proteasome subunit with HTLV-I Tax coupled with the independent interaction of Tax with either p100 or p65-I kappa B alpha targets these cytoplasmic NF-kappa B/Rel complexes to the proteasome for processing. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 raises rais VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 intriguing intrigue VERB VBG VerbForm=Ger _ _ _ _ 5 possibility possibility NOUN NN Number=Sing _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 physical physical ADJ JJ Degree=Pos _ _ _ _ 8 association association NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 HsN3 HsN3 NUM CD NumType=Card _ _ _ _ 12 proteasome proteasome ADJ JJ Degree=Pos _ _ _ _ 13 subunit subunit NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 Tax tax PROPN NNP Number=Sing _ _ _ _ 19 coupled couple VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 independent independent ADJ JJ Degree=Pos _ _ _ _ 23 interaction interaction NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 Tax tax NOUN NN Number=Sing _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 either either CCONJ CC _ _ _ _ _ 28 p100 p100 NUM CD NumType=Card _ _ _ _ 29 or or CCONJ CC _ _ _ _ _ 30 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 -I -i ADJ JJ Degree=Pos _ _ _ _ 32 kappa kappa NOUN NN Number=Sing _ _ _ _ 33 B b NOUN NN Number=Sing _ _ _ _ 34 alpha alpha ADP IN _ _ _ _ _ 35 targets target NOUN NNS Number=Plur _ _ _ _ 36 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 37 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 38 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 kappa kappa NOUN NN Number=Sing _ _ _ _ 41 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 / / PUNCT , _ _ _ _ SpaceAfter=No 43 Rel Rel NOUN NN Number=Sing _ _ _ _ 44 complexes complex NOUN NNS Number=Plur _ _ _ _ 45 to to ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 proteasome proteasome NOUN NN Number=Sing _ _ _ _ 48 for for ADP IN _ _ _ _ _ 49 processing processing NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4773 # text = Document 003001103 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001103 003001103 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4774 # text = Angiotensin II activates the proinflammatory transcription factor nuclear factor-kappaB in human monocytes. 1 Angiotensin Angiotensin PROPN NNP Number=Sing _ _ _ _ 2 II II PROPN NNP Number=Sing _ _ _ _ 3 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappab NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4775 # text = The renin-angiotensin system may contribute to the pathogenesis of atherosclerosis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 renin- renin- SYM NFP _ _ _ _ SpaceAfter=No 3 angiotensin angiotensin ADJ JJ Degree=Pos _ _ _ _ 4 system system NOUN NN Number=Sing _ _ _ _ 5 may may AUX MD VerbForm=Fin _ _ _ _ 6 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 atherosclerosis atherosclerosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 4776 # text = A common feature of all stages of atherosclerosis is inflammation of the vessel wall. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 common common ADJ JJ Degree=Pos _ _ _ _ 3 feature feature NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 all all DET DT _ _ _ _ _ 6 stages stage NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 atherosclerosis atherosclerosis NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 vessel vessel NOUN NN Number=Sing _ _ _ _ 14 wall wall NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 4777 # text = The transcription factor nuclear factor-kappaB (NF-kappaB) participates in most signaling pathways involved in inflammation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 -kappaB -kappaB PROPN NNP Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 participates participate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 most most ADJ JJS Degree=Sup _ _ _ _ 15 signaling signal NOUN NN Number=Sing _ _ _ _ 16 pathways pathway NOUN NNS Number=Plur _ _ _ _ 17 involved involved VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4778 # text = This study therefore examined the effect of angiotensin (ANG) II on NF-kappaB activation in monocytic cells, a major cellular component of human atheroma, by electrophoretic mobility shift assay. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 therefore therefore ADV RB _ _ _ _ _ 4 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 effect effect NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 angiotensin angiotensin NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 ANG ANG NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 II ii NUM CD NumType=Card _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 major major ADJ JJ Degree=Pos _ _ _ _ 24 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 25 component component NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 human human ADJ JJ Degree=Pos _ _ _ _ 28 atheroma atheroma NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 32 mobility mobility NOUN NN Number=Sing _ _ _ _ 33 shift shift NOUN NN Number=Sing _ _ _ _ 34 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4779 # text = ANG 1 ANG ang PROPN NNP Number=Sing _ _ _ _ # sent_id = 4780 # text = II, like TNFalpha, caused rapid activation of NF-kappaB in human mononuclear cells isolated from peripheral blood by Ficoll density gradient. 1 II ii ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 like like ADP IN _ _ _ _ _ 4 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 20 blood blood NOUN NN Number=Sing _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 Ficoll Ficoll ADJ JJ Degree=Pos _ _ _ _ 23 density density NOUN NN Number=Sing _ _ _ _ 24 gradient gradient NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4781 # text = This ANG II effect was blocked by the angiotensin AT1 receptor antagonist losartan. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 ANG Ang NOUN NN Number=Sing _ _ _ _ 3 II ii NUM CD NumType=Card _ _ _ _ 4 effect effect NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 angiotensin angiotensin NOUN NN Number=Sing _ _ _ _ 10 AT1 AT1 NUM CD NumType=Card _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 antagonist antagonist NOUN NN Number=Sing _ _ _ _ 13 losartan losartan NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 4782 # text = Specificity of ANG II-induced NF-kappaB activation was ascertained by supershift and competition experiments. 1 Specificity Specificity NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 ANG ANG PROPN NNP Number=Sing _ _ _ _ 4 II II NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT : _ _ _ _ SpaceAfter=No 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 ascertained ascertain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 supershift supershift NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 competition competition NOUN NN Number=Sing _ _ _ _ 17 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4783 # text = Moreover, ANG II stimulated NF-kappaB activation in human monocytes, but not in lymphocytes from the same preparation. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 ANG ang PRON NN Number=Sing _ _ _ _ 4 II ii PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 5 stimulated stimulate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 not not ADV RB _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 same same ADJ JJ Degree=Pos _ _ _ _ 21 preparation preparation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4784 # text = Together, the data demonstrate the ability of the vasoactive peptide ANG II to activate inflammatory pathways in human monocytes. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 data data NOUN NN Number=Sing _ _ _ _ 5 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 ability ability NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 vasoactive vasoactive ADJ JJ Degree=Pos _ _ _ _ 11 peptide peptide NOUN NN Number=Sing _ _ _ _ 12 ANG Ang PROPN NNP Number=Sing _ _ _ _ 13 II ii PROPN NNP Number=Sing _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 activate activate VERB VB VerbForm=Inf _ _ _ _ 16 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 17 pathways pathway NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4785 # text = Copyright 1999 Academic Press. 1 Copyright copyright NOUN NN Number=Sing _ _ _ _ 2 1999 1999 NUM CD NumType=Card _ _ _ _ 3 Academic academic PROPN NNP Number=Sing _ _ _ _ 4 Press Press PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4786 # text = Document 003001108 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001108 003001108 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4787 # text = X-rays-induced secretion of cellular factor(s) that enhance(s) HIV-1 promoter transcription in various non-irradiated transfected cell lines. 1 X x NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 rays ray NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 secretion secretion NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 s s X AFX _ _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 14 enhance enhance NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 s s X AFX _ _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 various various ADJ JJ Degree=Pos _ _ _ _ 25 non-irradiated non-irradiated ADJ JJ Degree=Pos _ _ _ _ 26 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4788 # text = Various cellular stress agents like ionizing radiation exposure could activate human immunodeficiency virus type 1 (HIV- 1) replication or reporter gene expression. 1 Various various ADJ JJ Degree=Pos _ _ _ _ 2 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 3 stress stress NOUN NN Number=Sing _ _ _ _ 4 agents agent NOUN NNS Number=Plur _ _ _ _ 5 like like SCONJ IN _ _ _ _ _ 6 ionizing ionize VERB VBG VerbForm=Ger _ _ _ _ 7 radiation radiation NOUN NN Number=Sing _ _ _ _ 8 exposure exposure NOUN NN Number=Sing _ _ _ _ 9 could could AUX MD VerbForm=Fin _ _ _ _ 10 activate activate VERB VB VerbForm=Inf _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 13 virus virus NOUN NN Number=Sing _ _ _ _ 14 type type NOUN NN Number=Sing _ _ _ _ 15 1 1 NUM CD NumType=Card _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ _ 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 replication replication NOUN NN Number=Sing _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 reporter reporter NOUN NN Number=Sing _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4789 # text = In addition, extracellular factor(s) released by X-ray-treated human colonic carcinoma cell line (HT29) might activate the long terminal repeat (LTR) of HIV-1 in non-irradiated HT29 cells. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 extracellular extracelular ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 s s X AFX _ _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 released release VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 X X PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 ray ray NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 colonic colonic NOUN NN Number=Sing _ _ _ _ 18 carcinoma carcinoma NOUN NN Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 line line NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 HT29 HT29 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 might might AUX MD VerbForm=Fin _ _ _ _ 25 activate activate VERB VB VerbForm=Inf _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 long long ADJ JJ Degree=Pos _ _ _ _ 28 terminal terminal NOUN NN Number=Sing _ _ _ _ 29 repeat repeat NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 non-irradiated non-irradiated ADJ JJ Degree=Pos _ _ _ _ 39 HT29 HT29 NUM CD NumType=Card _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 4790 # text = In the present report we show that in various transiently or stably transfected cell lines, X-ray irradiation up-regulates HIV-1 LTR transcription through the kappaB regulatory elements. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 report report NOUN NN Number=Sing _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 various various ADJ JJ Degree=Pos _ _ _ _ 10 transiently transiently ADV RB _ _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 stably stably ADV RB _ _ _ _ _ 13 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 X x PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 ray ray NOUN NN Number=Sing _ _ _ _ 20 irradiation irradiation NOUN NN Number=Sing _ _ _ _ 21 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 LTR Ltr NOUN NN Number=Sing _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 through through ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 32 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 33 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4791 # text = A factor(s), which is processed by and acts upon a variety of cell types, was detected by addition to non-irradiated cells of either X-ray-treated cells or a conditioned medium taken from irradiated cultures. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 s s X AFX _ _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 processed process VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 upon upon ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 variety variety NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 addition addition NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 non-irradiated non-irradiate ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 either either CCONJ CC _ _ _ _ _ 29 X x NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 ray ray NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ _ 35 or or CCONJ CC _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 conditioned condition VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 medium medium NOUN NN Number=Sing _ _ _ _ 39 taken take VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 from from ADP IN _ _ _ _ _ 41 irradiated irradiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 cultures culture NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 4792 # text = The magnitude of responsiveness is cell type dependent. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 magnitude magnitude NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 type type NOUN NN Number=Sing _ _ _ _ 8 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 4793 # text = In addition, X-ray activation of HIV-1 LTR in transiently or stably transfected cell lines is inhibited by a potent antioxidant drug, pyrrolidine dithiocarbamate and by another drug, known for its role in the trapping of growth factors, suramin. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 X x NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 ray ray NOUN NN Number=Sing _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 LTR Ltr NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 transiently transiently ADV RB _ _ _ _ _ 15 or or CCONJ CC _ _ _ _ _ 16 stably stably ADV RB _ _ _ _ _ 17 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 lines line NOUN NNS Number=Plur _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 potent potent ADJ JJ Degree=Pos _ _ _ _ 25 antioxidant antioxidant ADJ JJ Degree=Pos _ _ _ _ 26 drug drug NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 pyrrolidine pyrrolidine PRON PRP _ _ _ _ _ 29 dithiocarbamate dithiocarbamate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 another another DET DT _ _ _ _ _ 33 drug drug NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 for for ADP IN _ _ _ _ _ 37 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 38 role role NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 trapping trapping NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 growth growth NOUN NN Number=Sing _ _ _ _ 44 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 suramin suramin NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 4794 # text = The importance of these observations in the pathophysiology of patients with AIDS-related cancers treated by radiotherapy remains to be established. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 importance importance NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 observations observation NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 pathophysiology pathophysiology NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 patients patient NOUN NNS Number=Plur _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 AIDS aids NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 related related ADJ JJ Degree=Pos _ _ _ _ 15 cancers cancer NOUN NNS Number=Plur _ _ _ _ 16 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 radiotherapy radiotherapy NOUN NN Number=Sing _ _ _ _ 19 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 established establish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4795 # text = Document 003001111 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001111 003001111 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4796 # text = Novel therapies for inflammatory bowel disease. 1 Novel novel PROPN NNP Number=Sing _ _ _ _ 2 therapies therapy NOUN NNS Number=Plur _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 5 bowel bowel NOUN NN Number=Sing _ _ _ _ 6 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4797 # text = Looking back at successes and failures in newer approaches to treating IBD, it is tempting--although still difficult--to draw conclusions about pathogenesis. 1 Looking look VERB VBG VerbForm=Ger _ _ _ _ 2 back back ADV RB _ _ _ _ _ 3 at at ADP IN _ _ _ _ _ 4 successes success NOUN NNS Number=Plur _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 failures failure NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 newer newer ADJ JJR Degree=Cmp _ _ _ _ 9 approaches approach NOUN NNS Number=Plur _ _ _ _ 10 to to SCONJ IN _ _ _ _ _ 11 treating treat VERB VBG VerbForm=Ger _ _ _ _ 12 IBD IBD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 tempting tempt VERB VBG Tense=Pres|VerbForm=Part _ _ _ SpaceAfter=No 17 -- -- PUNCT , _ _ _ _ SpaceAfter=No 18 although although SCONJ IN _ _ _ _ _ 19 still still ADV RB _ _ _ _ _ 20 difficult difficult ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 -- -- PUNCT , _ _ _ _ SpaceAfter=No 22 to to PART TO _ _ _ _ _ 23 draw draw VERB VB VerbForm=Inf _ _ _ _ 24 conclusions conclusion NOUN NNS Number=Plur _ _ _ _ 25 about about ADP IN _ _ _ _ _ 26 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4798 # text = When a therapy proves effective, do clinicians truly know how it works? 1 When when ADV WRB PronType=Int _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 therapy therapy NOUN NN Number=Sing _ _ _ _ 4 proves prove VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 effective effective ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 clinicians clinician NOUN NNS Number=Plur _ _ _ _ 9 truly truly ADV RB _ _ _ _ _ 10 know know VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 how how ADV WRB PronType=Int _ _ _ _ 12 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 13 works work VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 14 ? ? PUNCT . _ _ _ _ _ # sent_id = 4799 # text = Even with a therapy as specific as anti-TNF antibody, it is not clear if the benefit is attributable to simple binding and clearance of TNF-alpha or to binding on the cell surface and subsequent deletion of the activated macrophage. 1 Even even ADV RB _ _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 therapy therapy NOUN NN Number=Sing _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 specific specific ADJ JJ Degree=Pos _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 anti anti X AFX _ _ _ _ SpaceAfter=No 9 -TNF -tnf ADJ JJ Degree=Pos _ _ _ _ 10 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 clear clear ADJ JJ Degree=Pos _ _ _ _ 16 if if SCONJ IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 benefit benefit NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 attributable attributable ADJ JJ Degree=Pos _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 simple simple VERB VB VerbForm=Inf _ _ _ _ 23 binding binding VERB VBG VerbForm=Ger _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 clearance clearance NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 alpha alpha PROPN NNP Number=Sing _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 to to SCONJ IN _ _ _ _ _ 32 binding bind VERB VBG VerbForm=Ger _ _ _ _ 33 on on ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ _ 36 surface surface NOUN NN Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 39 deletion deletion NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 macrophage macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 4800 # text = When a drug appears to be less effective than preclinical models suggest, can failures in effectiveness from delivery or dosing be differentiated? 1 When when ADV WRB PronType=Int _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 drug drug NOUN NN Number=Sing _ _ _ _ 4 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 less less ADV RBR Degree=Cmp _ _ _ _ 8 effective effective ADJ JJ Degree=Pos _ _ _ _ 9 than than ADP IN _ _ _ _ _ 10 preclinical preclinical ADJ JJ Degree=Pos _ _ _ _ 11 models model NOUN NNS Number=Plur _ _ _ _ 12 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 can can AUX MD VerbForm=Fin _ _ _ _ 15 failures failure NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 effectiveness effectiveness NOUN NN Number=Sing _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 delivery delivery NOUN NN Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 dosing dosing NOUN NN Number=Sing _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 24 ? ? PUNCT . _ _ _ _ _ # sent_id = 4801 # text = The disappointing results of clinical trials with IL-10--so at odds with the prediction of benefit from animal models--bring into question the validity of those models as well as the soundness of design of the clinical trials on which efficacy of IL-10 is judged. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 disappointing disappointing NOUN NN Number=Sing _ _ _ _ 3 results result NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 6 trials trial NOUN NNS Number=Plur _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 -- -- PUNCT , _ _ _ _ SpaceAfter=No 12 so so ADV RB _ _ _ _ _ 13 at at ADP IN _ _ _ _ _ 14 odds odd NOUN NNS Number=Plur _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 prediction prediction NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 benefit benefit NOUN NN Number=Sing _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 animal animal NOUN NN Number=Sing _ _ _ _ 22 models model NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 -- -- PUNCT , _ _ _ _ SpaceAfter=No 24 bring br VERB VBG VerbForm=Ger _ _ _ _ 25 into into ADP IN _ _ _ _ _ 26 question question NOUN NN Number=Sing _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 validity validity NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 those those DET DT Number=Plur|PronType=Dem _ _ _ _ 31 models model NOUN NNS Number=Plur _ _ _ _ 32 as as ADV RB _ _ _ _ _ 33 well well ADV RB Degree=Pos _ _ _ _ 34 as as ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 soundness soundness NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 design design NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 42 trials trial NOUN NNS Number=Plur _ _ _ _ 43 on on ADP IN _ _ _ _ _ 44 which which DET WDT PronType=Int _ _ _ _ 45 efficacy efficacy NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT , _ _ _ _ SpaceAfter=No 49 10 10 NUM CD NumType=Card _ _ _ _ 50 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 51 judged judge VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 4802 # text = The variability of response even to the most narrowly targeted agents suggests that these diseases are far more heterogeneous in humans than in their murine counterparts. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 variability variability NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 response response NOUN NN Number=Sing _ _ _ _ 5 even even ADV RB _ _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 most most ADV RBS _ _ _ _ _ 9 narrowly narrowly ADV RB _ _ _ _ _ 10 targeted target VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 agents agent NOUN NNS Number=Plur _ _ _ _ 12 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 15 diseases diseasis NOUN NNS Number=Plur _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 far far ADV RB Degree=Pos _ _ _ _ 18 more more ADV RBR _ _ _ _ _ 19 heterogeneous heterogeneous ADJ JJ Degree=Pos _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 humans human NOUN NNS Number=Plur _ _ _ _ 22 than than ADP IN _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 25 murine murine NOUN NN Number=Sing _ _ _ _ 26 counterparts counterpart NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4803 # text = Clinicians are only just beginning to recognize subclinical markers of response, and it may soon be possible to predict response on the basis of genetic composition. 1 Clinicians Clinician NOUN NNS Number=Plur _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 only only ADV RB _ _ _ _ _ 4 just just ADV RB _ _ _ _ _ 5 beginning begin VERB VBG VerbForm=Ger _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 recognize recognize VERB VB VerbForm=Inf _ _ _ _ 8 subclinical subclinical ADJ JJ Degree=Pos _ _ _ _ 9 markers marker NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 15 may may AUX MD VerbForm=Fin _ _ _ _ 16 soon soon ADV RB Degree=Pos _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 possible possible ADJ JJ Degree=Pos _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 predict predict VERB VB VerbForm=Inf _ _ _ _ 21 response response NOUN NN Number=Sing _ _ _ _ 22 on on ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 basis basis NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 27 composition composition NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4804 # text = For the moment, however, the field of pharmacogenetics is embryonic. 1 For for ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 moment moment NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 however however ADV RB _ _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 field field NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 pharmacogenetics pharmacogenetic NOUN NNS Number=Plur _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 embryonic embryonic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 4805 # text = Challenges in developing new therapeutic strategies include not only identifying novel agents, but also improving the definitions of clinical endpoints and defining efficacy at the biologic level. 1 Challenges challenge NOUN NNS Number=Plur _ _ _ _ 2 in in SCONJ IN _ _ _ _ _ 3 developing develop VERB VBG VerbForm=Ger _ _ _ _ 4 new new ADJ JJ Degree=Pos _ _ _ _ 5 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 6 strategies strategy NOUN NNS Number=Plur _ _ _ _ 7 include include VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 not not ADV RB _ _ _ _ _ 9 only only ADV RB _ _ _ _ _ 10 identifying identify VERB VBG VerbForm=Ger _ _ _ _ 11 novel novel NOUN NN Number=Sing _ _ _ _ 12 agents agent NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 also also ADV RB _ _ _ _ _ 16 improving improve VERB VBG VerbForm=Ger _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 definitions definition NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 21 endpoints endpoint NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 defining define VERB VBG VerbForm=Ger _ _ _ _ 24 efficacy efficacy NOUN NN Number=Sing _ _ _ _ 25 at at ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 biologic biologic ADJ JJ Degree=Pos _ _ _ _ 28 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 4806 # text = Only through considered evaluation of clinical evidence may clinicians determine which therapies should remain novelties and which should become an accepted part of the armamentarium. 1 Only only ADV RB _ _ _ _ _ 2 through through ADP IN _ _ _ _ _ 3 considered consider VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 evaluation evaluation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 7 evidence evidence NOUN NN Number=Sing _ _ _ _ 8 may may AUX MD VerbForm=Fin _ _ _ _ 9 clinicians clinician NOUN NNS Number=Plur _ _ _ _ 10 determine determine VERB VB VerbForm=Inf _ _ _ _ 11 which which DET WDT PronType=Int _ _ _ _ 12 therapies therapy NOUN NNS Number=Plur _ _ _ _ 13 should should AUX MD VerbForm=Fin _ _ _ _ 14 remain remain VERB VB VerbForm=Inf _ _ _ _ 15 novelties novelty NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 which which PRON WDT PronType=Int _ _ _ _ 18 should should AUX MD VerbForm=Fin _ _ _ _ 19 become become VERB VB VerbForm=Inf _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 accepted accept VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 part part NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 armamentarium armamentarium NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4807 # text = Document 003001112 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001112 003001112 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4808 # text = TRAMP, a novel apoptosis-mediating receptor with sequence homology to tumor necrosis factor receptor 1 and Fas(Apo-1/CD95). 1 TRAMP TRAMP SYM NFP _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 novel novel NOUN NN Number=Sing _ _ _ _ 5 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 mediating mediating VERB VBG VerbForm=Ger _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 sequence sequence NOUN NN Number=Sing _ _ _ _ 11 homology homology NOUN NN Number=Sing _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 tumor tumor NOUN NN Number=Sing _ _ _ _ 14 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ _ 17 1 1 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 Fas Fas NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 Apo-1/CD95 Apo-1/CD95 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4809 # text = A novel member of the tumor necrosis factor (TNF) receptor family, designated TRAMP, has been identified. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 novel novel NOUN NN Number=Sing _ _ _ _ 3 member member NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 tumor tumor NOUN NN Number=Sing _ _ _ _ 7 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 TRAMP Tramp NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 20 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4810 # text = The structural organization of the 393 amino acid long human TRAMP is most homologous to TNF receptor 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 structural structural ADJ JJ Degree=Pos _ _ _ _ 3 organization organization NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 393 393 NUM CD NumType=Card _ _ _ _ 7 amino amino NOUN NN Number=Sing _ _ _ _ 8 acid acid VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 long long ADV RB Degree=Pos _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 TRAMP Tramp NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 most most ADV RBS _ _ _ _ _ 14 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 TNF TNF PROPN NNP Number=Sing _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ # sent_id = 4811 # text = 1. 1 1 1 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ # sent_id = 4812 # text = TRAMP is abundantly expressed on thymocytes and lymphocytes. 1 TRAMP Tramp NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 abundantly abundantly ADV RB _ _ _ _ _ 4 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 4813 # text = Its extracellular domain is composed of four cysteine-rich domains, and the cytoplasmic region contains a death domain known to signal apoptosis. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 2 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 4 domain domain NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 four four NUM CD NumType=Card _ _ _ _ 9 cysteine cysteine NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 rich rich ADJ JJ Degree=Pos _ _ _ _ 12 domains domains NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 17 region region NOUN NN Number=Sing _ _ _ _ 18 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 death death NOUN NN Number=Sing _ _ _ _ 21 domain domain NOUN NN Number=Sing _ _ _ _ 22 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 signal signal VERB VB VerbForm=Inf _ _ _ _ 25 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4814 # text = Overexpression of TRAMP leads to two major responses, NF-kappaB activation and apoptosis. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 TRAMP TRAMP NOUN NN Number=Sing _ _ _ _ 4 leads lead NOUN NNS Number=Plur _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 two two NUM CD NumType=Card _ _ _ _ 7 major major ADJ JJ Degree=Pos _ _ _ _ 8 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4815 # text = TRAMP-induced cell death is inhibited by an inhibitor of ICE-like proteases, but not by Bcl-2. 1 TRAMP TRAMp SYM NFP _ _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 death death NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 ICE ice PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 like like ADP IN _ _ _ _ _ 15 proteases protease NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 not not ADV RB _ _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4816 # text = In addition, TRAMP does not appear to interact with any of the known apoptosis-inducing ligands of the TNF family. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 TRAMP TRAMP NOUN NN Number=Sing _ _ _ _ 5 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 appear appear VERB VB VerbForm=Inf _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 interact interact VERB VB VerbForm=Inf _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 any any DET DT _ _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 18 ligands ligand NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 TNF TNF PROPN NNP Number=Sing _ _ _ _ 22 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4817 # text = Document 003001115 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001115 003001115 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4818 # text = Selective activation and functional significance of p38alpha mitogen-activated protein kinase in lipopolysaccharide-stimulated neutrophils. 1 Selective selective ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 functional functional ADJ JJ Degree=Pos _ _ _ _ 5 significance significance NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 p38alpha p38alpha NOUN NN Number=Sing _ _ _ _ 8 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 -activated -activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4819 # text = Activation of leukocytes by proinflammatory stimuli selectively initiates intracellular signal transduction via sequential phosphorylation of kinases. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 6 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 7 selectively selectively ADV RB _ _ _ _ _ 8 initiates initiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 10 signal signal NOUN NN Number=Sing _ _ _ _ 11 transduction transduction NOUN NN Number=Sing _ _ _ _ 12 via via ADP IN _ _ _ _ _ 13 sequential sequential ADJ JJ Degree=Pos _ _ _ _ 14 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4820 # text = Lipopolysaccharide (LPS) stimulation of human neutrophils is known to result in activation of p38 mitogen-activated protein kinase (MAPk); however, the upstream activator(s) of p38 MAPk is unknown, and consequences of p38 MAPk activation remain largely undefined. 1 Lipopolysaccharide Lipopolysaccharide PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 result result VERB VB VerbForm=Inf _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 p38 p38 NUM CD NumType=Card _ _ _ _ 17 mitogen mitogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 kinase kinase NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 MAPk MAPk PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 ; ; PUNCT , _ _ _ _ _ 26 however however ADV RB _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 30 activator activator NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 s s X AFX _ _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 p38 p38 NUM CD NumType=Card _ _ _ _ 36 MAPk MAPk PROPN NNP Number=Sing _ _ _ _ 37 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 consequences consequences NOUN NNS Number=Plur _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 p38 p38 NUM CD NumType=Card _ _ _ _ 44 MAPk MAPk PROPN NNP Number=Sing _ _ _ _ 45 activation activation NOUN NN Number=Sing _ _ _ _ 46 remain remain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 47 largely largely ADV RB _ _ _ _ _ 48 undefined undefin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 4821 # text = We investigated the MAPk kinase (MKK) that activates p38 MAPk in response to LPS, the p38 MAPk isoforms that are activated as part of this pathway, and the functional responses affected by p38 MAPk activation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 MAPk MAPk PROPN NNP Number=Sing _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 MKK MKK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 p38 p38 NUM CD NumType=Card _ _ _ _ 12 MAPk MAPk NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 response response NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 p38 p38 NUM CD NumType=Card _ _ _ _ 20 MAPk MAPk NOUN NN Number=Sing _ _ _ _ 21 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 as as ADP IN _ _ _ _ _ 26 part part NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 29 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 functional functional ADJ JJ Degree=Pos _ _ _ _ 34 responses response NOUN NNS Number=Plur _ _ _ _ 35 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 p38 p38 NUM CD NumType=Card _ _ _ _ 38 MAPk MAPk PROPN NNP Number=Sing _ _ _ _ 39 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 4822 # text = Although MKK3, MKK4, and MKK6 all activated p38 MAPk in experimental models, only MKK3 was found to activate recombinant p38 MAPk in LPS-treated neutrophils. 1 Although although SCONJ IN _ _ _ _ _ 2 MKK3 MKK3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 MKK4 MKK4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 MKK6 MKK6 PROPN NNP Number=Sing _ _ _ _ 8 all all ADV RB _ _ _ _ _ 9 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 p38 p38 NUM CD NumType=Card _ _ _ _ 11 MAPk MAPk NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 experimental experimental ADJ JJ Degree=Pos _ _ _ _ 14 models model NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 only only ADV RB _ _ _ _ _ 17 MKK3 MKK3 NOUN NN Number=Sing _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 activate activate VERB VB VerbForm=Inf _ _ _ _ 22 recombinant recombinant ADV RB _ _ _ _ _ 23 p38 p38 NUM CD NumType=Card _ _ _ _ 24 MAPk MAPk PROPN NNP Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4823 # text = Of p38 MAPk isoforms studied, only p38alpha and p38delta were detected in neutrophils. 1 Of of ADP IN _ _ _ _ _ 2 p38 p38 NUM CD NumType=Card _ _ _ _ 3 MAPk MAPk PROPN NNP Number=Sing _ _ _ _ 4 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 5 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 only only ADV RB _ _ _ _ _ 8 p38alpha p38alpha NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 p38delta p38delta NOUN NN Number=Sing _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 4824 # text = LPS stimulation selectively activated p38alpha. 1 LPS Lps NOUN NN Number=Sing _ _ _ _ 2 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 3 selectively selectively ADV RB _ _ _ _ _ 4 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 p38alpha p38alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 . . PUNCT . _ _ _ _ _ # sent_id = 4825 # text = Specific inhibitors of p38alpha MAPk blocked LPS-induced adhesion, nuclear factor-kappa B (NF-kappaB) activation, and synthesis of tumor necrosis factor-alpha (TNF-alpha). 1 Specific specific ADJ JJ Degree=Pos _ _ _ _ 2 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p38alpha p38alpha PROPN NNP Number=Sing _ _ _ _ 5 MAPk MAPk PROPN NNP Number=Sing _ _ _ _ 6 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b PROPN NNP Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 tumor tumor NOUN NN Number=Sing _ _ _ _ 28 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 29 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 alpha alpha NOUN NN Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 4826 # text = Inhibition of p38alpha MAPk resulted in a transient decrease in TNF-alpha mRNA accumulation but persistent loss of TNF-alpha synthesis. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 p38alpha p38alpha PROPN NNP Number=Sing _ _ _ _ 4 MAPk MAPk PROPN NNP Number=Sing _ _ _ _ 5 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 transient transient ADJ JJ Degree=Pos _ _ _ _ 9 decrease decrease NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 alpha alpha PROPN NNP Number=Sing _ _ _ _ 14 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 15 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 persistent persistent ADJ JJ Degree=Pos _ _ _ _ 18 loss loss NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 alpha alpha NOUN NN Number=Sing _ _ _ _ 23 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4827 # text = These findings support a pathway by which LPS stimulation of neutrophils results in activation of MKK3, which in turn activates p38alpha MAPk, ultimately regulating adhesion, NF-kappaB activation, enhanced gene expression of TNF-alpha, and regulation of TNF-alpha synthesis. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 support support VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 pathway pathway NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 LPS Lps PROPN NNP Number=Sing _ _ _ _ 9 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 12 results result NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 MKK3 MKK3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 turn turn NOUN NN Number=Sing _ _ _ _ 21 activates activate NOUN NNS Number=Plur _ _ _ _ 22 p38alpha p38alpha ADP IN _ _ _ _ _ 23 MAPk MAPk PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 ultimately ultimately ADV RB _ _ _ _ _ 26 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 27 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 gene gene ADJ JJ Degree=Pos _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 regulation regulation NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 alpha alpha NOUN NN Number=Sing _ _ _ _ 48 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4828 # text = Document 003001117 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001117 003001117 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4829 # text = Thrombin and thrombin receptor agonist peptide induce early events of T cell activation and synergize with TCR cross-linking for CD69 expression and interleukin 2 production. 1 Thrombin Thrombin PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 thrombin thrombin ADP IN _ _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ _ 5 agonist agonist NOUN NN Number=Sing _ _ _ _ 6 peptide peptide NOUN NN Number=Sing _ _ _ _ 7 induce induce NOUN NN Number=Sing _ _ _ _ 8 early early ADJ JJ Degree=Pos _ _ _ _ 9 events event NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 synergize synergize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 TCR Tcr NOUN NN Number=Sing _ _ _ _ 18 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 CD69 CD69 PROPN NNP Number=Sing _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 interleukin interleukin ADJ JJ Degree=Pos _ _ _ _ 25 2 2 NUM CD NumType=Card _ _ _ _ 26 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4830 # text = Thrombin stimulation of the T leukemic cell line Jurkat induced a transient increase in [Ca2+]i. 1 Thrombin Thrombin ADP IN _ _ _ _ _ 2 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 T T PROPN NNP Number=Sing _ _ _ _ 6 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 line line NOUN NN Number=Sing _ _ _ _ 9 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 10 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 transient transient ADJ JJ Degree=Pos _ _ _ _ 13 increase increase NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 + + SYM SYM _ _ _ _ SpaceAfter=No 18 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 i i PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4831 # text = Proteolytic activity of the enzyme was required for this effect since diisopropyl fluorophosphate-thrombin failed to increase [Ca2+]i. 1 Proteolytic Proteolytic ADJ JJ Degree=Pos _ _ _ _ 2 activity activity NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 enzyme enzyme NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 10 effect effect NOUN NN Number=Sing _ _ _ _ 11 since since ADP IN _ _ _ _ _ 12 diisopropyl diisopropyl ADJ JJ Degree=Pos _ _ _ _ 13 fluorophosphate fluorophosphate NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 thrombin thrombin NOUN NN Number=Sing _ _ _ _ 16 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 increase increase VERB VB VerbForm=Inf _ _ _ _ 19 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 + + SYM SYM _ _ _ _ SpaceAfter=No 22 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 i i PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4832 # text = Furthermore, hirudin and anti-thrombin III inhibited the thrombin-induced [Ca2+]i rise in Jurkat T cells. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 hirudin hirudin ADJ JJ Degree=Pos _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 anti-thrombin anti-thrombin ADJ JJ Degree=Pos _ _ _ _ 6 III III PROPN NNP Number=Sing _ _ _ _ 7 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 thrombin- thrombin- SYM NFP _ _ _ _ SpaceAfter=No 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 + + SYM SYM _ _ _ _ SpaceAfter=No 14 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 i i PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 rise rise VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4833 # text = A synthetic thrombin receptor agonist peptide (TRP) of 7 residues (SFLLRNP) was found to be as effective as thrombin for [Ca2+]i mobilization, and both agonists induced Ca2+ release exclusively from internal stores. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 3 thrombin thrombin NOUN NN Number=Sing _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ _ 5 agonist agonist NOUN NN Number=Sing _ _ _ _ 6 peptide peptide NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 TRP TRP NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 7 7 NUM CD NumType=Card _ _ _ _ 12 residues residue NOUN NNS Number=Plur _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 SFLLRNP SFLLRNP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 as as ADV RB _ _ _ _ _ 21 effective effective ADJ JJ Degree=Pos _ _ _ _ 22 as as ADV RB _ _ _ _ _ 23 thrombin thrombin ADP IN _ _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 + + SYM SYM _ _ _ _ SpaceAfter=No 28 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 i i PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 30 mobilization mobilization NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 both both DET DT _ _ _ _ _ 34 agonists agonist NOUN NNS Number=Plur _ _ _ _ 35 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 Ca2 ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 + + SYM SYM _ _ _ _ _ 38 release release NOUN NN Number=Sing _ _ _ _ 39 exclusively exclusively ADV RB _ _ _ _ _ 40 from from ADP IN _ _ _ _ _ 41 internal internal ADJ JJ Degree=Pos _ _ _ _ 42 stores store NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 4834 # text = Thrombin stimulated tyrosine phosphorylation of several proteins of molecular mass 40, 42, 70, 120, and 130 kDa. 1 Thrombin Thrombin ADP IN _ _ _ _ _ 2 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 4 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 several several ADJ JJ Degree=Pos _ _ _ _ 7 proteins protein NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 10 mass mass NOUN NN Number=Sing _ _ _ _ 11 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 42 42 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 70 70 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 120 120 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 130 130 NUM CD NumType=Card _ _ _ _ 21 kDa kDa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4835 # text = There was a good correlation between thrombin-induced tyrosine phosphorylation of the latter three proteins and Ca2+ mobilization. 1 There there PRON EX _ _ _ _ _ 2 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 good good ADJ JJ Degree=Pos _ _ _ _ 5 correlation correlation NOUN NN Number=Sing _ _ _ _ 6 between between ADP IN _ _ _ _ _ 7 thrombin thrombin ADV RB _ _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 11 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 latter latter ADJ JJ Degree=Pos _ _ _ _ 15 three three NUM CD NumType=Card _ _ _ _ 16 proteins protein NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 Ca2 Ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 + + SYM SYM _ _ _ _ _ 20 mobilization mobilization NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4836 # text = Thrombin and TRP also caused translocation of protein kinase C from the cytosol to the plasma membrane. 1 Thrombin Thrombin PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 TRP TRP PROPN NNP Number=Sing _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 translocation translocation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 kinase kinase NOUN NN Number=Sing _ _ _ _ 10 C C NOUN NN Number=Sing _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 plasma plasma NOUN NN Number=Sing _ _ _ _ 17 membrane membrane NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4837 # text = As a likely consequence of these events, thrombin activated the nuclear factor NF-kB. 1 As as ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 likely likely ADJ JJ Degree=Pos _ _ _ _ 4 consequence consequence NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 events event NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 thrombin thrombin ADV RB _ _ _ _ _ 10 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kB. kB. PROPN NNP Number=Sing _ _ _ _ # sent_id = 4838 # text = Several cell lines of hematopoietic origin including the leukemic 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 lines line NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 6 origin origin NOUN NN Number=Sing _ _ _ _ 7 including include VERB VBG VerbForm=Ger _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 leukemic leukemic NOUN NN Number=Sing _ _ _ _ # sent_id = 4839 # text = T cell line HPB.ALL and the erythroleukemic cell line K562 were responsive to thrombin, whereas others such as THP1, a myelomonocytic cell line, and BL2, a Burkitt lymphoma were refractory to thrombin or TRP stimulation. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 line line NOUN NN Number=Sing _ _ _ _ 4 HPB.ALL Hpb.all NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 erythroleukemic erythroleukemic ADJ JJ Degree=Pos _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 line line NOUN NN Number=Sing _ _ _ _ 10 K562 K562 NUM CD NumType=Card _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 thrombin thrombin VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 whereas whereas SCONJ IN _ _ _ _ _ 17 others other NOUN NNS Number=Plur _ _ _ _ 18 such such ADJ JJ Degree=Pos _ _ _ _ 19 as as ADP IN _ _ _ _ _ 20 THP1 tHP1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 myelomonocytic myelomonocytic ADJ JJ Degree=Pos _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 BL2 Bl2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 Burkitt Burkitt PROPN NNP Number=Sing _ _ _ _ 32 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 33 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 refractory refractory ADJ JJ Degree=Pos _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 thrombin thrombin VERB VB VerbForm=Inf _ _ _ _ 37 or or CCONJ CC _ _ _ _ _ 38 TRP Trp VERB VB VerbForm=Inf _ _ _ _ 39 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 4840 # text = The magnitude of the thrombin response in the different cell types paralleled the expression of the thrombin receptor mRNA. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 magnitude magnitude NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 thrombin thrombin ADJ JJ Degree=Pos _ _ _ _ 6 response response NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 different different ADJ JJ Degree=Pos _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 types type NOUN NNS Number=Plur _ _ _ _ 12 paralleled parallel VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 thrombin thrombin NOUN NN Number=Sing _ _ _ _ 18 receptor receptor NOUN NN Number=Sing _ _ _ _ 19 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4841 # text = We found that activation of Jurkat T cells by a combination of phytohemagglutinin and phorbol 12-myristate 13-acetate led to a dramatic inhibition of thrombin receptor mRNA expression and to a concomitant loss of the thrombin response. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 combination combination NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 phytohemagglutinin phytohemagglutinin NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 16 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT : _ _ _ _ SpaceAfter=No 18 myristate myristate NOUN NN Number=Sing _ _ _ _ 19 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT : _ _ _ _ SpaceAfter=No 21 acetate acetate NOUN NN Number=Sing _ _ _ _ 22 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 dramatic dramatic ADJ JJ Degree=Pos _ _ _ _ 26 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 thrombin thrombin NOUN NN Number=Sing _ _ _ _ 29 receptor receptor NOUN NN Number=Sing _ _ _ _ 30 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 31 expression expression NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 concomitant concomitant ADJ JJ Degree=Pos _ _ _ _ 36 loss loss NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 thrombin thrombin ADJ JJ Degree=Pos _ _ _ _ 40 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 4842 # text = Finally, we demonstrate that thrombin and TRP enhanced CD69 expression and interleukin 2 production induced by T cell receptor cross-linking in both Jurkat T cells and peripheral blood lymphocytes. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 thrombin thrombin NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 TRP Trp NOUN NN Number=Sing _ _ _ _ 9 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 CD69 Cd69 NUM CD NumType=Card _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 interleukin interleukin ADJ JJ Degree=Pos _ _ _ _ 14 2 2 NUM CD NumType=Card _ _ _ _ 15 production production NOUN NN Number=Sing _ _ _ _ 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ _ 21 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 both both DET DT _ _ _ _ _ 25 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 26 T T PROPN NNP Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 30 blood blood NOUN NN Number=Sing _ _ _ _ 31 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4843 # text = These findings highlight the role of thrombin as a potential regulator of T lymphocyte activation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 highlight highlight VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 thrombin thrombin NOUN NN Number=Sing _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 potential potential ADJ JJ Degree=Pos _ _ _ _ 11 regulator regulator NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4844 # text = Document 003001118 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001118 003001118 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4845 # text = The Oct-2 transcription factor. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4846 # text = The Oct-2 transcription factor is a member of the POU (Pit-Oct-Unc) family of transcription factors and is expressed only in B lymphocytes and in neuronal cells but not in other cell types. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 member member NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 POU POU PROPN NNP Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 Pit pit PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 Unc Unc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 family family NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 factors factor NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 only only ADV RB _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 B b ADJ JJ Degree=Pos _ _ _ _ 30 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 neuronal neuronal ADJ JJ Degree=Pos _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ _ 35 but but CCONJ CC _ _ _ _ _ 36 not not PART RB _ _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 other other ADJ JJ Degree=Pos _ _ _ _ 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 4847 # text = The primary RNA transcript of the gene is subject to alternative splicing to yield different variants which can either activate or repress gene expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 primary primary ADJ JJ Degree=Pos _ _ _ _ 3 RNA RNa NOUN NN Number=Sing _ _ _ _ 4 transcript transcript NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 subject subject ADJ JJ Degree=Pos _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 12 splicing splicing NOUN NN Number=Sing _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 yield yield VERB VB VerbForm=Inf _ _ _ _ 15 different different ADJ JJ Degree=Pos _ _ _ _ 16 variants variant NOUN NNS Number=Plur _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 can can AUX MD VerbForm=Fin _ _ _ _ 19 either either ADV RB _ _ _ _ _ 20 activate activate VERB VB VerbForm=Inf _ _ _ _ 21 or or CCONJ CC _ _ _ _ _ 22 repress repress VERB VB VerbForm=Inf _ _ _ _ 23 gene gene ADJ JJ Degree=Pos _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4848 # text = The forms produced in B lymphocytes have a predominantly activating effect on gene expression whereas those produced in neuronal cells have a predominantly inhibitory effect and can repress the expression of both the herpes simplex virus immediate-early genes and the cellular tyrosine hydroxylase gene. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 forms form NOUN NNS Number=Plur _ _ _ _ 3 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 B b ADJ JJ Degree=Pos _ _ _ _ 6 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 7 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 predominantly predominantly ADV RB _ _ _ _ _ 10 activating activat ADJ JJ Degree=Pos _ _ _ _ 11 effect effect NOUN NN Number=Sing _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 gene gene ADJ JJ Degree=Pos _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 whereas whereas SCONJ IN _ _ _ _ _ 16 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 17 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 neuronal neuronal ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 predominantly predominantly ADV RB _ _ _ _ _ 24 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 25 effect effect NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 can can AUX MD VerbForm=Fin _ _ _ _ 28 repress repress VERB VB VerbForm=Inf _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 both both CCONJ CC _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 herpes herpe NOUN NN Number=Sing _ _ _ _ 35 simplex simplex NOUN NN Number=Sing _ _ _ _ 36 virus virus NOUN NN Number=Sing _ _ _ _ 37 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 38 - - PUNCT , _ _ _ _ SpaceAfter=No 39 early early ADJ JJ Degree=Pos _ _ _ _ 40 genes gene NOUN NNS Number=Plur _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 44 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 45 hydroxylase hydroxylase NOUN NN Number=Sing _ _ _ _ 46 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 4849 # text = Thus Oct-2 plays an important role in the regulation of cellular gene expression in both B cells and neuronal cells as well as in the control of viral latency. 1 Thus thus PROPN NNP Number=Sing _ _ _ _ 2 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 important important ADJ JJ Degree=Pos _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 regulation regulation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 both both DET DT _ _ _ _ _ 18 B b ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 neuronal neuronal ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 as as ADV RB _ _ _ _ _ 24 well well ADV RB Degree=Pos _ _ _ _ 25 as as ADP IN _ _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 control control NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 viral viral ADJ JJ Degree=Pos _ _ _ _ 31 latency latency NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4850 # text = Document 003001119 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001119 003001119 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4851 # text = Interactions between the class II transactivator and CREB binding protein increase transcription of major histocompatibility complex class II genes. 1 Interactions Interaction NOUN NNS Number=Plur _ _ _ _ 2 between between ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 class class NOUN NN Number=Sing _ _ _ _ 5 II ii NUM CD NumType=Card _ _ _ _ 6 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 CREB CREB PROPN NNP Number=Sing _ _ _ _ 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 increase increase NOUN NN Number=Sing _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 major major ADJ JJ Degree=Pos _ _ _ _ 15 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 16 complex complex NOUN NN Number=Sing _ _ _ _ 17 class class NOUN NN Number=Sing _ _ _ _ 18 II ii NUM CD NumType=Card _ _ _ _ 19 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4852 # text = Class II major histocompatibility (class II) genes are regulated in a B-cell-specific and gamma interferon-inducible fashion. 1 Class class NOUN NN Number=Sing _ _ _ _ 2 II ii NUM CD NumType=Card _ _ _ _ 3 major major ADJ JJ Degree=Pos _ _ _ _ 4 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 class class NOUN NN Number=Sing _ _ _ _ 7 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 genes gene NOUN NNS Number=Plur _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 gamma gamma NOUN NN Number=Sing _ _ _ _ 20 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 23 fashion fashion NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4853 # text = The master switch for the expression of these genes is the class II transactivator (CIITA). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 master master NOUN NN Number=Sing _ _ _ _ 3 switch switch NOUN NN Number=Sing _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 9 genes gene NOUN NNS Number=Plur _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 class class NOUN NN Number=Sing _ _ _ _ 13 II ii NUM CD NumType=Card _ _ _ _ 14 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4854 # text = In this report, we demonstrate that one of the functions of CIITA is to recruit the CREB binding protein (CBP) to class II promoters. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 one one NUM CD NumType=Card _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 functions function NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 CIITA CIITA NOUN NN Number=Sing _ _ _ _ 14 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 recruit recruit VERB VB VerbForm=Inf _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 CREB CREB NOUN NN Number=Sing _ _ _ _ 19 binding binding VERB VBG VerbForm=Ger _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 CBP CBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 class class VERB VB VerbForm=Inf _ _ _ _ 26 II ii NUM CD NumType=Card _ _ _ _ 27 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4855 # text = Not only functional but also specific binding interactions between CIITA and CBP were demonstrated. 1 Not not ADV RB _ _ _ _ _ 2 only only ADV RB _ _ _ _ _ 3 functional functional ADJ JJ Degree=Pos _ _ _ _ 4 but but CCONJ CC _ _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 specific specific ADJ JJ Degree=Pos _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 interactions interaction NOUN NNS Number=Plur _ _ _ _ 9 between between ADP IN _ _ _ _ _ 10 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 CBP CBP PROPN NNP Number=Sing _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 4856 # text = Moreover, a dominant negative form of CBP decreased the activity of class II promoters and levels of class II determinants on the surface of cells. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 5 negative negative ADJ JJ Degree=Pos _ _ _ _ 6 form form NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 CBP CBP PROPN NNP Number=Sing _ _ _ _ 9 decreased decrease VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 class class NOUN NN Number=Sing _ _ _ _ 14 II ii NUM CD NumType=Card _ _ _ _ 15 promoters promoter NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 levels level NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 class class NOUN NN Number=Sing _ _ _ _ 20 II ii NUM CD NumType=Card _ _ _ _ 21 determinants determinant NOUN NNS Number=Plur _ _ _ _ 22 on on ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 surface surface NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4857 # text = Finally, the inhibition of class II gene expression by the glucocorticoid hormone could be attributed to the squelching of CBP by the glucocorticoid receptor. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 class class NOUN NN Number=Sing _ _ _ _ 7 II ii NUM CD NumType=Card _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 13 hormone hormone NOUN NN Number=Sing _ _ _ _ 14 could could AUX MD VerbForm=Fin _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 attributed attribute VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 squelching squelching NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 CBP CBP PROPN NNP Number=Sing _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 25 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4858 # text = We conclude that CBP, a histone acetyltransferase, plays an important role in the transcription of class II genes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 CBP CBP NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 histone histone NOUN NN Number=Sing _ _ _ _ 8 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 important important ADJ JJ Degree=Pos _ _ _ _ 13 role role NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 class class NOUN NN Number=Sing _ _ _ _ 19 II ii NUM CD NumType=Card _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4859 # text = Document 003001123 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001123 003001123 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4860 # text = The myeloid zinc finger gene, MZF-1, regulates the CD34 promoter in vitro. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 3 zinc zinc NOUN NN Number=Sing _ _ _ _ 4 finger finger NOUN NN Number=Sing _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 MZF MZF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 CD34 Cd34 PROPN NNP Number=Sing _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4861 # text = MZF-1 is a C2H2 zinc finger gene encoding a putative transcriptional regulator of myeloid differentiation. 1 MZF MZF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 C2 c2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 H2 H2 NOUN NN Number=Sing _ _ _ _ 8 zinc zinc NOUN NN Number=Sing _ _ _ _ 9 finger finger NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 putative putative ADJ JJ Degree=Pos _ _ _ _ 14 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 15 regulator regulator NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 18 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 4862 # text = The MZF-1 protein contains 13 C2H2 zinc fingers arranged in bipartite DNA binding domains containing zinc fingers through 4 and, in the carboxy-terminus, 5 through 13. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 MZF Mzf NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 13 13 NUM CD NumType=Card _ _ _ _ 8 C2 C2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 H2 H2 NUM CD NumType=Card _ _ _ _ 10 zinc zinc NOUN NN Number=Sing _ _ _ _ 11 fingers finger NOUN NNS Number=Plur _ _ _ _ 12 arranged arrange VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 bipartite bipartite NOUN NN Number=Sing _ _ _ _ 15 DNA dna NOUN NN Number=Sing _ _ _ _ 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 domains domain NOUN NNS Number=Plur _ _ _ _ 18 containing contain VERB VBG VerbForm=Ger _ _ _ _ 19 zinc zinc NOUN NN Number=Sing _ _ _ _ 20 fingers finger NOUN NNS Number=Plur _ _ _ _ 21 through through ADP IN _ _ _ _ _ 22 4 4 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 carboxy carboxy NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 terminus terminus NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 5 5 NUM CD NumType=Card _ _ _ _ 32 through through ADP IN _ _ _ _ _ 33 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4863 # text = We previously identified the DNA consensus binding site recognized by the two DNA binding domains. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 previously previously ADV RB _ _ _ _ _ 3 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 DNA dna NOUN NN Number=Sing _ _ _ _ 6 consensus consensus NOUN NN Number=Sing _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 site site NOUN NN Number=Sing _ _ _ _ 9 recognized recognize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 two two NUM CD NumType=Card _ _ _ _ 13 DNA dna NOUN NN Number=Sing _ _ _ _ 14 binding binding VERB VBG VerbForm=Ger _ _ _ _ 15 domains domain NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4864 # text = To assess the transcription regulatory function of MZF-1, the full-length MZF-1 coding region was fused to the DNA binding domain of the yeast transactivator GAL4. 1 To to PART TO _ _ _ _ _ 2 assess assess VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 6 function function NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 MZF MZF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 full full ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 length length NOUN NN Number=Sing _ _ _ _ 16 MZF Mzf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 coding coding NOUN NN Number=Sing _ _ _ _ 20 region region NOUN NN Number=Sing _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 fused fuse VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 DNA dna NOUN NN Number=Sing _ _ _ _ 26 binding binde VERB VBG VerbForm=Ger _ _ _ _ 27 domain domain NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 yeast yeast ADJ JJS Degree=Sup _ _ _ _ 31 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 32 GAL4 Gal4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4865 # text = The expression vector was cotransfected with the chloramphenicol acetyl transferase (CAT) reporter gene regulated by the thymidine kinase promoter containing GAL4 DNA binding sites into NIH 3T3, 293, K562, and Jurkat cell lines. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 vector vector NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 cotransfected cotransfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 9 acetyl acetyl NOUN NN Number=Sing _ _ _ _ 10 transferase transferase NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 CAT Cat NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 reporter reporter NOUN NN Number=Sing _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 thymidine thymidine NOUN NN Number=Sing _ _ _ _ 20 kinase kinase NOUN NN Number=Sing _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 containing contain VERB VBG VerbForm=Ger _ _ _ _ 23 GAL4 GAL4 NUM CD NumType=Card _ _ _ _ 24 DNA dna NOUN NN Number=Sing _ _ _ _ 25 binding bind VERB VBG VerbForm=Ger _ _ _ _ 26 sites site NOUN NNS Number=Plur _ _ _ _ 27 into into ADP IN _ _ _ _ _ 28 NIH NIh DET DT _ _ _ _ _ 29 3T3 3T3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 293 293 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 K562 k562 NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 4866 # text = MZF-1 represses CAT reporter gene expression via GAL4 binding sites in the nonhematopoietic cell lines NIH 3T3 and 293. 1 MZF MZF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 represses represse NOUN NNS Number=Plur _ _ _ _ 5 CAT cat ADJ JJ Degree=Pos _ _ _ _ 6 reporter reporter NOUN NN Number=Sing _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 via via ADP IN _ _ _ _ _ 10 GAL4 GAL4 NUM CD NumType=Card _ _ _ _ 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 sites site NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 nonhematopoietic nonhematopoietic ADJ JJ Degree=Pos _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 lines line NOUN NNS Number=Plur _ _ _ _ 18 NIH NIH PROPN NNP Number=Sing _ _ _ _ 19 3T3 3T3 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 293 293 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4867 # text = In contrast, MZF-1 activates CAT reporter gene expression in the hematopoietic cell lines K562 and Jurkat. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 MZF MZF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 activates activate NOUN NNS Number=Plur _ _ _ _ 8 CAT cat ADJ JJ Degree=Pos _ _ _ _ 9 reporter reporter NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 lines line NOUN NNS Number=Plur _ _ _ _ 17 K562 K562 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4868 # text = The MZF-1 binding sites are present in the promoters of several genes expressed during myeloid differentiation, including the CD34 promoter. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 MZF MZF NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 binding binding NOUN NN Number=Sing _ _ _ _ 6 sites site NOUN NNS Number=Plur _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 present present ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 promoters promoter NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 several several ADJ JJ Degree=Pos _ _ _ _ 14 genes gene NOUN NNS Number=Plur _ _ _ _ 15 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 during during ADP IN _ _ _ _ _ 17 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 18 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 including include VERB VBG VerbForm=Ger _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 CD34 CD34 PROPN NNP Number=Sing _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4869 # text = MZF-1 transcriptional regulation of this physiologically relevant promoter was assessed in both hematopoietic and nonhematopoietic cell lines. 1 MZF Mzf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 regulation regulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 8 physiologically physiologically ADV RB _ _ _ _ _ 9 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 assessed assess VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 both both CCONJ CC _ _ _ _ _ 15 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 nonhematopoietic nonhematopoietic ADJ JJ Degree=Pos _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4870 # text = Recombinant MZF-1 protein specifically binds to the consensus binding sites in the CD34 promoter in mobility shift assays. 1 Recombinant Recombinant PROPN NNP Number=Sing _ _ _ _ 2 MZF MZF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 specifically specifically ADV RB _ _ _ _ _ 7 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 consensus consensus NOUN NN Number=Sing _ _ _ _ 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 sites site NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 CD34 CD34 PROPN NNP Number=Sing _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 mobility mobility NOUN NN Number=Sing _ _ _ _ 19 shift shift NOUN NN Number=Sing _ _ _ _ 20 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4871 # text = MZF-1 expression vectors were cotransfected with the luciferase reporter plasmids regulated by the CD34 promoter into both nonhematopoietic and hematopoietic cell lines. 1 MZF MZF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 vectors vector NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 cotransfected cotransfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 luciferase luciferase ADJ JJ Degree=Pos _ _ _ _ 11 reporter reporter NOUN NN Number=Sing _ _ _ _ 12 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 13 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 CD34 CD34 PROPN NNP Number=Sing _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 into into ADP IN _ _ _ _ _ 19 both both CCONJ CC _ _ _ _ _ 20 nonhematopoietic nonhematopoietic ADJ JJ Degree=Pos _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4872 # text = As with the heterologous DNA binding domain, MZF-1 represses reporter gene expression in nonhematopoietic cell lines and activates expression in hematopoietic cell lines. 1 As as ADP IN _ _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 5 DNA dna NOUN NN Number=Sing _ _ _ _ 6 binding binding VERB VBG VerbForm=Ger _ _ _ _ 7 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 MZF MZF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 represses represse NOUN NNS Number=Plur _ _ _ _ 13 reporter reporter NOUN NN Number=Sing _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 nonhematopoietic nonhematopoietic ADJ JJ Degree=Pos _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 lines line NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 activates activate NOUN NNS Number=Plur _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4873 # text = Activation of CD34 expression in hematopoietic cell lines is dependent on the presence of intact MZF-1 binding sites. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 CD34 CD34 NUM CD NumType=Card _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 lines line NOUN NNS Number=Plur _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 presence presence NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 intact intact NOUN NN Number=Sing _ _ _ _ 16 MZF MZF NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 binding binding VERB VBG VerbForm=Ger _ _ _ _ 20 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4874 # text = The cell type-specific regulation of the CD34 promoter by MZF-1 suggests the presence of tissue-specific regulators/adapters or differential MZF-1 modifications that determine MZF-1 transcriptional regulatory function. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 regulation regulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 CD34 CD34 PROPN NNP Number=Sing _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 MZF MZF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 presence presence NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 specific specific ADJ JJ Degree=Pos _ _ _ _ 22 regulators regulator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 / / PUNCT , _ _ _ _ SpaceAfter=No 24 adapters adapter NOUN NNS Number=Plur _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 differential differential ADJ JJ Degree=Pos _ _ _ _ 27 MZF MZF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 modifications modification NOUN NNS Number=Plur _ _ _ _ 31 that that PRON WDT PronType=Rel _ _ _ _ 32 determine determine VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 MZF MZF NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ _ 36 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 37 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 38 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4875 # text = Document 003001126 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001126 003001126 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4876 # text = A mammalian histone deacetylase related to the yeast transcriptional regulator Rpd3p [see comments] 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 3 histone histone NOUN NN Number=Sing _ _ _ _ 4 deacetylase deacetylase NOUN NN Number=Sing _ _ _ _ 5 related related ADJ JJ Degree=Pos _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 yeast yeast ADJ JJS Degree=Sup _ _ _ _ 9 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 10 regulator regulator NOUN NN Number=Sing _ _ _ _ 11 Rpd3 Rpd3 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 p p NOUN NN Number=Sing _ _ _ _ 13 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 see see VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 15 comments comment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 4877 # text = Trapoxin is a microbially derived cyclotetrapeptide that inhibits histone deacetylation in vivo and causes mammalian cells to arrest in the cell cycle. 1 Trapoxin Trapoxin PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 microbially microbially ADV RB _ _ _ _ _ 5 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 cyclotetrapeptide cyclotetrapeptide NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 histone histone NOUN NN Number=Sing _ _ _ _ 10 deacetylation deacetylation NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 vivo vivo NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 causes cause VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 arrest arrest VERB VB VerbForm=Inf _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4878 # text = A trapoxin affinity matrix was used to isolate two nuclear proteins that copurified with histone deacetylase activity. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 trapoxin trapoxin NOUN NN Number=Sing _ _ _ _ 3 affinity affinity NOUN NN Number=Sing _ _ _ _ 4 matrix matrix NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 isolate isolate VERB VB VerbForm=Inf _ _ _ _ 9 two two NUM CD NumType=Card _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 copurified copurify VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 histone histone NOUN NN Number=Sing _ _ _ _ 16 deacetylase deacetylase NOUN NN Number=Sing _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 4879 # text = Both proteins were identified by peptide microsequencing, and a complementary DNA encoding the histone deacetylase catalytic subunit (HD1) was cloned from a human Jurkat T cell library. 1 Both both DET DT _ _ _ _ _ 2 proteins protein NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 peptide peptide NOUN NN Number=Sing _ _ _ _ 7 microsequencing microsequencing NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 complementary complementary ADJ JJ Degree=Pos _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 histone histone NOUN NN Number=Sing _ _ _ _ 16 deacetylase deacetylase NOUN NN Number=Sing _ _ _ _ 17 catalytic catalytic ADJ JJ Degree=Pos _ _ _ _ 18 subunit subunit NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 HD1 Hd1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 cloned clon VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 library library NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4880 # text = As the predicted protein is very similar to the yeast transcriptional regulator Rpd3p, these results support a role for histone deacetylase as a key regulator of eukaryotic transcription. 1 As as SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 predicted predict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 very very ADV RB _ _ _ _ _ 7 similar similar ADJ JJ Degree=Pos _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 yeast yeast ADJ JJS Degree=Sup _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 regulator regulator NOUN NN Number=Sing _ _ _ _ 13 Rpd3 Rpd3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 p p NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 17 results result NOUN NNS Number=Plur _ _ _ _ 18 support support VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 role role NOUN NN Number=Sing _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 histone histone NOUN NN Number=Sing _ _ _ _ 23 deacetylase deacetylase NOUN NN Number=Sing _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 key key ADJ JJ Degree=Pos _ _ _ _ 27 regulator regulator NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 eukaryotic eukaryotic ADJ JJ Degree=Pos _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4881 # text = Document 003001130 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001130 003001130 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4882 # text = BCL-6 expression during B-cell activation. 1 BCL Bcl INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 6 6 NUM CD NumType=Card _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 during during ADP IN _ _ _ _ _ 6 B b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4883 # text = Translocations involving the BCL-6 gene are common in the diffuse large cell subtype of non-Hodgkin's lymphoma. 1 Translocations Translocation NOUN NNS Number=Plur _ _ _ _ 2 involving involve VERB VBG VerbForm=Ger _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 BCL BCL NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 6 6 NUM CD NumType=Card _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 common common ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 diffuse diffuse NOUN NN Number=Sing _ _ _ _ 13 large large ADJ JJ Degree=Pos _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 subtype subtype NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 non-Hodgkin non-Hodgkin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 's 's PART POS _ _ _ _ _ 19 lymphoma lymphoma NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4884 # text = Invariably, the BCL-6 coding region is intact, but its 5' untranslated region is replaced with sequences from the translocation partner. 1 Invariably Invariably ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 BCL BCL NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 6 6 NUM CD NumType=Card _ _ _ _ 7 coding coding NOUN NN Number=Sing _ _ _ _ 8 region region NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 intact intact ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 14 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ' ' PUNCT `` _ _ _ _ _ 17 untranslated untranslated ADJ JJ Degree=Pos _ _ _ _ 18 region region NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 replaced replace VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 sequences sequence NOUN NNS Number=Plur _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 translocation translocation NOUN NN Number=Sing _ _ _ _ 26 partner partner NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4885 # text = The present study shows that BCL-6 expression is regulated in lymphocytes during mitogenic stimulation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 shows show NOUN NNS Number=Plur _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 BCL Bcl VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 6 6 NUM CD NumType=Card _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 14 during during ADP IN _ _ _ _ _ 15 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 16 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 4886 # text = Resting B and T lymphocytes contain high levels of BCL-6 mRNA. 1 Resting rest PROPN NNP Number=Sing _ _ _ _ 2 B b PROPN NNP Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 T T PROPN NNP Number=Sing _ _ _ _ 5 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 6 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 high high ADJ JJ Degree=Pos _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 BCL BCL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 6 6 NUM CD NumType=Card _ _ _ _ 13 mRNA. mRNA. NOUN NN Number=Sing _ _ _ _ # sent_id = 4887 # text = Stimulation of mouse B cells with anti-IgM or IgD antibodies, bacterial lipopolysaccharide, phorbol 12-myristate 13-acetate plus ionomycin, or CD40 ligand led to a five-fold to 35-fold decrease in BCL-6 mRNA levels. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 mouse mouse NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 anti-IgM anti-Igm NOUN NN Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 IgD igd NOUN NN Number=Sing _ _ _ _ 10 antibodies antibody NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 13 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 16 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT : _ _ _ _ SpaceAfter=No 18 myristate myristate NOUN NN Number=Sing _ _ _ _ 19 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT : _ _ _ _ SpaceAfter=No 21 acetate acetate NOUN NN Number=Sing _ _ _ _ 22 plus plus CCONJ CC _ _ _ _ _ 23 ionomycin ionomycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 27 ligand ligand PROPN NNP Number=Sing _ _ _ _ 28 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 five five NUM CD NumType=Card _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 fold fold NOUN NN Number=Sing _ _ _ _ 34 to to ADP IN _ _ _ _ _ 35 35 35 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 fold fold NOUN NN Number=Sing _ _ _ _ 38 decrease decrease NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 BCL BCL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT , _ _ _ _ SpaceAfter=No 42 6 6 NUM CD NumType=Card _ _ _ _ 43 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 44 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 4888 # text = Similar downregulation of BCL-6 mRNA was seen in human B cells stimulated with Staphylococcus aureus plus interleukin-2 or anti-IgM antibodies and in human T lymphocytes stimulated with phytohemagglutinin. 1 Similar similar ADJ JJ Degree=Pos _ _ _ _ 2 downregulation downregulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 BCL BCL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 6 6 NUM CD NumType=Card _ _ _ _ 7 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 B b ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 Staphylococcus Staphylococcus PROPN NNP Number=Sing _ _ _ _ 17 aureus aureus NOUN NN Number=Sing _ _ _ _ 18 plus plus CCONJ CC _ _ _ _ _ 19 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 anti-IgM anti-Igm ADJ JJ Degree=Pos _ _ _ _ 24 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 human human ADJ JJ Degree=Pos _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 30 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 phytohemagglutinin phytohemagglutinin NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4889 # text = BCL-6 mRNA levels began to decrease 8 to 16 hours after stimulation, before cells entered S phase. 1 BCL Bcl INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 6 6 NUM CD NumType=Card _ _ _ _ 4 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 5 levels level NOUN NNS Number=Plur _ _ _ _ 6 began begin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 decrease decrease VERB VB VerbForm=Inf _ _ _ _ 9 8 8 NUM CD NumType=Card _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 16 16 NUM CD NumType=Card _ _ _ _ 12 hours hour NOUN NNS Number=Plur _ _ _ _ 13 after after ADP IN _ _ _ _ _ 14 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 before before SCONJ IN _ _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 entered enter VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 S s PROPN NNP Number=Sing _ _ _ _ 20 phase phase NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4890 # text = Although polyclonal activation of B cells in vitro invariably decreased BCL-6 MRNA expression, activated B cells from human germinal centers expressed BCL-6 mRNA at levels comparable to the levels in resting B cells. 1 Although although SCONJ IN _ _ _ _ _ 2 polyclonal polyclonal ADJ JJ Degree=Pos _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 B b ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 vitro vitro PROPN NNP Number=Sing _ _ _ _ 9 invariably invariably ADV RB _ _ _ _ _ 10 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 BCL BCL NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 6 6 NUM CD NumType=Card _ _ _ _ 14 MRNA MRNa PROPN NNP Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 B b ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 germinal germinal ADJ JJ Degree=Pos _ _ _ _ 23 centers center NOUN NNS Number=Plur _ _ _ _ 24 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 BCL BCL NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 6 6 NUM CD NumType=Card _ _ _ _ 28 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 29 at at ADP IN _ _ _ _ _ 30 levels level NOUN NNS Number=Plur _ _ _ _ 31 comparable comparable ADJ JJ Degree=Pos _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 levels level NOUN NNS Number=Plur _ _ _ _ 35 in in SCONJ IN _ _ _ _ _ 36 resting rest VERB VBG VerbForm=Ger _ _ _ _ 37 B b ADJ JJ Degree=Pos _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 4891 # text = Despite these similar mRNA levels, BCL-6 protein expression was threefold to 34-fold higher in germinal center B cells than in resting B cells, suggesting that BCL-6 protein levels are controlled by translational or posttranslational mechanisms. 1 Despite despite ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 similar similar ADJ JJ Degree=Pos _ _ _ _ 4 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 5 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 BCL BCL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 6 6 NUM CD NumType=Card _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 threefold threefold VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 34 34 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 fold fold VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 higher higher ADV RBR Degree=Cmp _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 germinal germinal ADJ JJ Degree=Pos _ _ _ _ 21 center center NOUN NN Number=Sing _ _ _ _ 22 B b ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 than than ADP IN _ _ _ _ _ 25 in in SCONJ IN _ _ _ _ _ 26 resting rest VERB VBG VerbForm=Ger _ _ _ _ 27 B b ADJ JJ Degree=Pos _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 31 that that SCONJ IN _ _ _ _ _ 32 BCL BCL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 6 6 NUM CD NumType=Card _ _ _ _ 35 protein protein NOUN NN Number=Sing _ _ _ _ 36 levels level NOUN NNS Number=Plur _ _ _ _ 37 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 38 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 by by ADP IN _ _ _ _ _ 40 translational translational ADJ JJ Degree=Pos _ _ _ _ 41 or or CCONJ CC _ _ _ _ _ 42 posttranslational posttranslational ADJ JJ Degree=Pos _ _ _ _ 43 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 4892 # text = These observations suggest that the germinal center reaction provides unique activation signals to B cells that allow for continued, high-level BCL-6 expression. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 germinal germinal ADJ JJ Degree=Pos _ _ _ _ 7 center center NOUN NN Number=Sing _ _ _ _ 8 reaction reaction NOUN NN Number=Sing _ _ _ _ 9 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 unique unique ADJ JJ Degree=Pos _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 signals signal NOUN NNS Number=Plur _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 B b ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 allow allow VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 continued continue VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 level level NOUN NN Number=Sing _ _ _ _ 24 BCL Bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 6 6 NUM CD NumType=Card _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4893 # text = Document 003001134 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001134 003001134 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4894 # text = Involvement of an SAF-like transcription factor in the activation of serum amyloid A gene in monocyte/macrophage cells by lipopolysaccharide. 1 Involvement involvement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 SAF SAF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 like like ADJ JJ Degree=Pos _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 serum serum NOUN NN Number=Sing _ _ _ _ 14 amyloid amyloid VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 / / PUNCT , _ _ _ _ SpaceAfter=No 20 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4895 # text = Serum amyloid A (SAA) has been linked to atherosclerosis because of its ability to remodel high-density lipoprotein by the depletion of apolipoprotein A1, its ability to bind cholesterol, and its presence in the atherosclerotic plaques of coronary and carotid arteries. 1 Serum Serum NOUN NN Number=Sing _ _ _ _ 2 amyloid amyloid NOUN NN Number=Sing _ _ _ _ 3 A a PROPN NNP Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 SAA SAA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 9 linked link VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 atherosclerosis atherosclerosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 12 because because ADP IN _ _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 ability ability NOUN NN Number=Sing _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 remodel remodel VERB VB VerbForm=Inf _ _ _ _ 18 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 density density NOUN NN Number=Sing _ _ _ _ 21 lipoprotein lipoprotein NOUN NN Number=Sing _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 depletion depletion NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 apolipoprotein apolipoprotein NOUN NN Number=Sing _ _ _ _ 27 A1 A1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 30 ability ability NOUN NN Number=Sing _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 bind bind VERB VB VerbForm=Inf _ _ _ _ 33 cholesterol cholesterol NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 37 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 presence presence NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 atherosclerotic atherosclerotic ADJ JJ Degree=Pos _ _ _ _ 42 plaques plaque NOUN NNS Number=Plur _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 coronary coronary NOUN NN Number=Sing _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 carotid carotid NOUN NN Number=Sing _ _ _ _ 47 arteries artery NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 4896 # text = In the present study, we investigated the induction mechanism of SAA gene in THP-1 monocyte/macrophage cells which play a critical role in the development of atherosclerotic fatty streak and plaque formation. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 SAA SAA PROPN NNP Number=Sing _ _ _ _ 13 gene gene PROPN NNP Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 THP THP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 / / PUNCT , _ _ _ _ SpaceAfter=No 20 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 play play VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 critical critical ADJ JJ Degree=Pos _ _ _ _ 26 role role NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 development development NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 atherosclerotic atherosclerotic ADJ JJ Degree=Pos _ _ _ _ 32 fatty fatty NOUN NN Number=Sing _ _ _ _ 33 streak streak NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 plaque plaque NOUN NN Number=Sing _ _ _ _ 36 formation formation NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 4897 # text = We and others have shown that SAA gene is induced in monocyte/macrophage cells by lipopolysaccharide (LPS). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 others other NOUN NNS Number=Plur _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 SAA SAa PROPN NNP Number=Sing _ _ _ _ 8 gene gene PROPN NNP Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 / / PUNCT , _ _ _ _ SpaceAfter=No 14 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4898 # text = By promoter function analysis, we show that the SAA promoter sequence between -280 and -226 can confer LPS responsiveness. 1 By by ADP IN _ _ _ _ _ 2 promoter promoter NOUN NN Number=Sing _ _ _ _ 3 function function NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 SAA SAA NOUN NN Number=Sing _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 sequence sequence NOUN NN Number=Sing _ _ _ _ 13 between between ADP IN _ _ _ _ _ 14 - - SYM SYM _ _ _ _ SpaceAfter=No 15 280 280 NUM CD NumType=Card _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 - - SYM SYM _ _ _ _ SpaceAfter=No 18 226 226 NUM CD NumType=Card _ _ _ _ 19 can can AUX MD VerbForm=Fin _ _ _ _ 20 confer confer VERB VB VerbForm=Inf _ _ _ _ 21 LPS LPS PROPN NNP Number=Sing _ _ _ _ 22 responsiveness responsiveness NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4899 # text = Gel electrophoretic mobility shift assay detected an induced DNA-binding activity in these cells in response to LPS. 1 Gel gel VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 3 mobility mobility NOUN NN Number=Sing _ _ _ _ 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assay assay NOUN NN Number=Sing _ _ _ _ 6 detected detect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 response response NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4900 # text = Characterization of the DNA-binding protein by UV cross-linking, Southwestern blot, and antibody ablation/supershift assays revealed that it is similar to a recently reported nuclear factor designated SAF. 1 Characterization Characterization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 UV UV PROPN NNP Number=Sing _ _ _ _ 10 cross cross PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 -linking -linking NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 Southwestern southwestern ADJ JJ Degree=Pos _ _ _ _ 14 blot blot NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 antibody antibody ADJ JJ Degree=Pos _ _ _ _ 18 ablation ablation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 / / PUNCT , _ _ _ _ SpaceAfter=No 20 supershift supershift NOUN NN Number=Sing _ _ _ _ 21 assays assay NOUN NNS Number=Plur _ _ _ _ 22 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 similar similar ADJ JJ Degree=Pos _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 recently recently ADV RB _ _ _ _ _ 30 reported report VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 32 factor factor NOUN NN Number=Sing _ _ _ _ 33 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 SAF SAF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4901 # text = These results demonstrated that LPS-mediated SAA gene induction in monocyte/macrophage cells is primarily due to the induction of SAF activity. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 LPS Lps PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 SAA SAa PROPN NNP Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 / / PUNCT , _ _ _ _ SpaceAfter=No 14 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 primarily primarily ADV RB _ _ _ _ _ 18 due due ADP IN _ _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 induction induction NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 SAF SAF PROPN NNP Number=Sing _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4902 # text = Document 003001143 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001143 003001143 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4903 # text = Human T-cell leukemia virus type I Tax activation of NF-kappa B/Rel involves phosphorylation and degradation of 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 type type NOUN NN Number=Sing _ _ _ _ 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 8 Tax tax PROPN NNP Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ 14 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 Rel Rel PROPN NNP Number=Sing _ _ _ _ 17 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 degradation degradation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ # sent_id = 4904 # text = I kappa B alpha and RelA (p65)-mediated induction of the c-rel gene. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa PROPN NNP Number=Sing _ _ _ _ 3 B b PROPN NNP Number=Sing _ _ _ _ 4 alpha alpha PROPN NNP Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 RelA Rela PROPN NNP Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 - - PUNCT : _ _ _ _ SpaceAfter=No 11 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 c- c- SYM NFP _ _ _ _ SpaceAfter=No 16 rel rel ADJ JJ Degree=Pos _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4905 # text = The tax gene product of human T-cell leukemia virus type I (HTLV-I) is a potent transcriptional activator that both stimulates viral gene expression and activates an array of cellular genes involved in T-cell growth. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 tax tax NOUN NN Number=Sing _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ _ 4 product product NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 10 virus virus NOUN NN Number=Sing _ _ _ _ 11 type type NOUN NN Number=Sing _ _ _ _ 12 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 potent potent NOUN NN Number=Sing _ _ _ _ 21 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 22 activator activator NOUN NN Number=Sing _ _ _ _ 23 that that PRON WDT PronType=Rel _ _ _ _ 24 both both ADV RB _ _ _ _ _ 25 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 viral viral ADJ JJ Degree=Pos _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 array array NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 35 genes gene NOUN NNS Number=Plur _ _ _ _ 36 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 4906 # text = Tax acts indirectly by inducing or modifying the action of various host transcription factors, including members of the NF-kappa B/Rel family of enhancer-binding proteins. 1 Tax tax NOUN NN Number=Sing _ _ _ _ 2 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 indirectly indirectly ADV RB _ _ _ _ _ 4 by by SCONJ IN _ _ _ _ _ 5 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 modifying modify VERB VBG VerbForm=Ger _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 action action NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 various various ADJ JJ Degree=Pos _ _ _ _ 12 host host NOUN NN Number=Sing _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 including include VERB VBG VerbForm=Ger _ _ _ _ 17 members member NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappa kappa PROPN NNP Number=Sing _ _ _ _ 23 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 / / PUNCT , _ _ _ _ SpaceAfter=No 25 Rel Rel PROPN NNP Number=Sing _ _ _ _ 26 family family NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 binding binding VERB VBG VerbForm=Ger _ _ _ _ 31 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4907 # text = In resting T cells, many of these NF-kappa B/Rel factors are sequestered in the cytoplasm by various ankyrin-rich inhibitory proteins, including I kappa B alpha. 1 In in SCONJ IN _ _ _ _ _ 2 resting rest VERB VBG VerbForm=Ger _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 many many ADJ JJ Degree=Pos _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa PROPN NNP Number=Sing _ _ _ _ 12 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 / / PUNCT , _ _ _ _ SpaceAfter=No 14 Rel Rel NOUN NN Number=Sing _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 sequestered sequester VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 various various ADJ JJ Degree=Pos _ _ _ _ 23 ankyrin- ankyrin- PUNCT , _ _ _ _ SpaceAfter=No 24 rich rich ADJ JJ Degree=Pos _ _ _ _ 25 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 26 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 including include VERB VBG VerbForm=Ger _ _ _ _ 29 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 30 kappa kappa PROPN NNP Number=Sing _ _ _ _ 31 B b PROPN NNP Number=Sing _ _ _ _ 32 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 4908 # text = HTLV-I Tax expression leads to the constitutive nuclear expression of biologically active NF-kappa B and c-Rel complexes; however, the biochemical mechanism(s) underlying this response remains poorly understood. 1 HTLV Htlv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 4 Tax tax PROPN NNP Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 biologically biologically ADV RB _ _ _ _ _ 14 active active ADJ JJ Degree=Pos _ _ _ _ 15 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 Rel Rel NOUN NN Number=Sing _ _ _ _ 23 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 ; ; PUNCT , _ _ _ _ _ 25 however however ADV RB _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 29 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 s s X AFX _ _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 underlying underly VERB VBG VerbForm=Ger _ _ _ _ 34 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 35 response response NOUN NN Number=Sing _ _ _ _ 36 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 poorly poorly ADJ JJ Degree=Pos _ _ _ _ 38 understood understand NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 4909 # text = In this study, we demonstrate that Tax-stimulated nuclear expression of NF-kappa B in both HTLV-I-infected and Tax-transfected human T cells is associated with the phosphorylation and rapid proteolytic degradation of I kappa B alpha. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 both both DET DT _ _ _ _ _ 20 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 T t PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 39 proteolytic proteolytic ADJ JJ Degree=Pos _ _ _ _ 40 degradation degradation NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 43 kappa kappa PROPN NNP Number=Sing _ _ _ _ 44 B B PROPN NNP Number=Sing _ _ _ _ 45 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 4910 # text = In contrast to prior in vitro studies, at least a fraction of the phosphorylated form of I kappa B alpha remains physically associated with the NF-kappa B complex in vivo but is subject to rapid degradation, thereby promoting the nuclear translocation of the active NF-kappa B complex. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 prior prior VERB VB VerbForm=Inf _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 vitro vitro NOUN NN Number=Sing _ _ _ _ 7 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 at at ADV RB _ _ _ _ _ 10 least least ADV RBS Degree=Sup _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 fraction fraction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 form form NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 19 kappa kappa PROPN NNP Number=Sing _ _ _ _ 20 B b PROPN NNP Number=Sing _ _ _ _ 21 alpha alpha ADV RB _ _ _ _ _ 22 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 physically physically ADV RB _ _ _ _ _ 24 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ _ 31 complex complex NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 vivo vivo NOUN NN Number=Sing _ _ _ _ 34 but but CCONJ CC _ _ _ _ _ 35 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 subject subject ADJ JJ Degree=Pos _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 39 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 thereby thereby ADV RB _ _ _ _ _ 42 promoting promote VERB VBG VerbForm=Ger _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 45 translocation translocation NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 active active ADJ JJ Degree=Pos _ _ _ _ 49 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 kappa kappa NOUN NN Number=Sing _ _ _ _ 52 B b NOUN NN Number=Sing _ _ _ _ 53 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 4911 # text = We further demonstrate that Tax induction of nuclear c-Rel expression is activated by the RelA (p65) subunit of NF-kappa B, which activates transcription of the c-rel gene through an intrinsic kappa B enhancer element. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 Tax tax NOUN NN Number=Sing _ _ _ _ 6 induction induction NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 Rel Rel NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 RelA Rela NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 subunit subunit NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa PROPN NNP Number=Sing _ _ _ _ 26 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 which which PRON WDT PronType=Rel _ _ _ _ 29 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 c- c- SYM NFP _ _ _ _ SpaceAfter=No 34 rel rel NOUN NN Number=Sing _ _ _ _ 35 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 through through ADP IN _ _ _ _ _ 37 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 intrinsic intrinsic ADJ JJ Degree=Pos _ _ _ _ 39 kappa kappa NOUN NN Number=Sing _ _ _ _ 40 B b NOUN NN Number=Sing _ _ _ _ 41 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 42 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 4912 # text = In normal cells, the subsequent accumulation of nuclear c-Rel acts to inhibit its own continued production, indicating the presence of an autoregulatory loop. 1 In in ADP IN _ _ _ _ _ 2 normal normal ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 7 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 Rel Rel NOUN NN Number=Sing _ _ _ _ 13 acts act NOUN NNS Number=Plur _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 16 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 17 own own ADJ JJ Degree=Pos _ _ _ _ 18 continued continue VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 presence presence NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 autoregulatory autoregulatory ADJ JJ Degree=Pos _ _ _ _ 27 loop loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4913 # text = (ABSTRACT TRUNCATED AT 250 WORDS) 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 ABSTRACT ABSTRACT X GW _ _ _ _ _ 3 TRUNCATED Truncate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 AT at ADV RB _ _ _ _ _ 5 250 250 NUM CD NumType=Card _ _ _ _ 6 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4914 # text = Document 003001145 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001145 003001145 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4915 # text = Nitric oxide-stimulated guanine nucleotide exchange on p21ras. 1 Nitric Nitric ADJ JJ Degree=Pos _ _ _ _ 2 oxide oxide NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 guanine guanine NOUN NN Number=Sing _ _ _ _ 6 nucleotide nucleotide NOUN NN Number=Sing _ _ _ _ 7 exchange exchange NOUN NN Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 p21ras p21ra NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4916 # text = The protooncogene p21ras, a monomeric G protein family member, plays a critical role in converting extracellular signals into intracellular biochemical events. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 protooncogene protooncogene NOUN NN Number=Sing _ _ _ _ 3 p21ras p21ras NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 monomeric monomeric ADJ JJ Degree=Pos _ _ _ _ 7 G g NOUN NN Number=Sing _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 family family NOUN NN Number=Sing _ _ _ _ 10 member member NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 critical critical ADJ JJ Degree=Pos _ _ _ _ 15 role role NOUN NN Number=Sing _ _ _ _ 16 in in SCONJ IN _ _ _ _ _ 17 converting converte VERB VBG VerbForm=Ger _ _ _ _ 18 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 19 signals signal NOUN NNS Number=Plur _ _ _ _ 20 into into ADP IN _ _ _ _ _ 21 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 22 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 23 events event NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4917 # text = Here, we report that nitric oxide (NO) activates p21ras in human T cells as evidenced by an increase in GTP-bound p21ras. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 nitric nitric ADJ JJ Degree=Pos _ _ _ _ 7 oxide oxide NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 NO no INTJ UH _ _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 p21ras p21ra NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 as as SCONJ IN _ _ _ _ _ 18 evidenced evidence VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 increase increase NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 GTP GTP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 bound bound ADJ JJ Degree=Pos _ _ _ _ 26 p21ras p21ra NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4918 # text = In vitro studies using pure recombinant p21ras demonstrate that the activation is direct and reversible. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 using use VERB VBG VerbForm=Ger _ _ _ _ 5 pure pure ADJ JJ Degree=Pos _ _ _ _ 6 recombinant recombinant NOUN NN Number=Sing _ _ _ _ 7 p21ras p21ra NOUN NNS Number=Plur _ _ _ _ 8 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 direct direct ADJ JJ Degree=Pos _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 reversible reversible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4919 # text = Circular dichroism analysis reveals that NO induces a profound conformational change in p21ras in association with GDP/GTP exchange. 1 Circular circular ADJ JJ Degree=Pos _ _ _ _ 2 dichroism dichroism NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 reveals reveal VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 NO no DET DT _ _ _ _ _ 7 induces induce NOUN NNS Number=Plur _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 profound profound ADJ JJ Degree=Pos _ _ _ _ 10 conformational conformational ADJ JJ Degree=Pos _ _ _ _ 11 change change NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 p21ras p21ra NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 association association NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 GDP gdp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 /GTP /gtp PROPN NNP Number=Sing _ _ _ _ 19 exchange exchange NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4920 # text = The mechanism of activation is due to S-nitrosylation of a critical cysteine residue which stimulates guanine nucleotide exchange. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 due due ADP IN _ _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 S- S- NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 nitrosylation nitrosylation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 critical critical ADJ JJ Degree=Pos _ _ _ _ 13 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 14 residue residue NOUN NN Number=Sing _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 guanine guanine NUM CD NumType=Card _ _ _ _ 18 nucleotide nucleotide NOUN NN Number=Sing _ _ _ _ 19 exchange exchange NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4921 # text = Furthermore, we demonstrate that p21ras is essential for NO-induced downstream signaling, such as NF-kappa B activation, and that endogenous NO can activate p21ras in the same cell. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 p21ras p21ras NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 essential essential ADJ JJ Degree=Pos _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 NO no ADV RB _ _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 14 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 such such ADJ JJ Degree=Pos _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa PROPN NNP Number=Sing _ _ _ _ 21 B b PROPN NNP Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 27 NO no NOUN NN Number=Sing _ _ _ _ 28 can can AUX MD VerbForm=Fin _ _ _ _ 29 activate activate VERB VB VerbForm=Inf _ _ _ _ 30 p21ras p21ra NOUN NNS Number=Plur _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 same same ADJ JJ Degree=Pos _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4922 # text = These studies identify p21ras as a target of the same cell. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 identify identify VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 p21ras p21ra NOUN NNS Number=Plur _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 target target NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 same same ADJ JJ Degree=Pos _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 4923 # text = These studies identify p21ras as a target of NO in T cells and suggest that NO activates p21ras by an action which mimics that of guanine nucleotide exchange factors. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 identify identify VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 p21ras p21ra NOUN NNS Number=Plur _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 target target NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NO no DET DT _ _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 T t ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 NO no DET DT _ _ _ _ _ 17 activates activate NOUN NNS Number=Plur _ _ _ _ 18 p21ras p21ra NOUN NNS Number=Plur _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 action action NOUN NN Number=Sing _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 mimics mimics VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 guanine guanine NUM CD NumType=Card _ _ _ _ 27 nucleotide nucleotide ADJ JJ Degree=Pos _ _ _ _ 28 exchange exchange NOUN NN Number=Sing _ _ _ _ 29 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4924 # text = Document 003001147 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001147 003001147 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4925 # text = The spatial distribution of human immunoglobulin genes within the nucleus: evidence for gene topography independent of cell type and transcriptional activity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 spatial spatial ADJ JJ Degree=Pos _ _ _ _ 3 distribution distribution NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 7 genes gene NOUN NNS Number=Plur _ _ _ _ 8 within within ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 : : PUNCT : _ _ _ _ _ 12 evidence evidence NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 gene gene ADJ JJ Degree=Pos _ _ _ _ 15 topography topography NOUN NN Number=Sing _ _ _ _ 16 independent independent ADJ JJ Degree=Pos _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 type type NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4926 # text = The three-dimensional positioning of immunoglobulin 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 three three NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 dimensional dimensional ADJ JJ Degree=Pos _ _ _ _ 5 positioning positioning NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 immunoglobulin immunoglobulin NOUN NN Number=Sing _ _ _ _ # sent_id = 4927 # text = (Ig) genes within the nucleus of human cells was investigated using in situ hybridization and confocal microscopy. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 Ig ig X ADD _ _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 genes gene NOUN NNS Number=Plur _ _ _ _ 5 within within ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 using use VERB VBG VerbForm=Ger _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 situ situ NOUN NN Number=Sing _ _ _ _ 16 hybridization hybridization NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 confocal confocal ADJ JJ Degree=Pos _ _ _ _ 19 microscopy microscopy NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4928 # text = The visualization of heavy and light chain genes in B-lymphoid cells showed that the three Ig genes are differentially and nonrandomly distributed in different nuclear subvolumes: the kappa genes were found to be preferentially confined to an outer nuclear volume, whereas the gamma and lambda genes consistently occupied more central positions within the nucleus, the lambda genes being more interior when compared with the gamma genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 visualization visualization NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 heavy heavy ADJ JJ Degree=Pos _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 light light ADJ JJ Degree=Pos _ _ _ _ 7 chain chain NOUN NN Number=Sing _ _ _ _ 8 genes gene NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 B B ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 three three NUM CD NumType=Card _ _ _ _ 18 Ig ig NOUN NN Number=Sing _ _ _ _ 19 genes gene NOUN NNS Number=Plur _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 differentially differentially ADV RB _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 nonrandomly nonrandomly ADV RB _ _ _ _ _ 24 distributed distribute VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 different different ADJ JJ Degree=Pos _ _ _ _ 27 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 28 subvolumes subvolume NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 : : PUNCT : _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 kappa kappa NOUN NN Number=Sing _ _ _ _ 32 genes gene NOUN NNS Number=Plur _ _ _ _ 33 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 be be AUX VB VerbForm=Inf _ _ _ _ 37 preferentially preferentially ADV RB _ _ _ _ _ 38 confined confine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 to to ADP IN _ _ _ _ _ 40 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 41 outer outer ADJ JJ Degree=Pos _ _ _ _ 42 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 43 volume volume NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 whereas whereas SCONJ IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 gamma gamma NOUN NN Number=Sing _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 lambda lambda NOUN NN Number=Sing _ _ _ _ 50 genes gene NOUN NNS Number=Plur _ _ _ _ 51 consistently consistently ADV RB _ _ _ _ _ 52 occupied occupy VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 53 more more ADV RBR _ _ _ _ _ 54 central central ADJ JJ Degree=Pos _ _ _ _ 55 positions position NOUN NNS Number=Plur _ _ _ _ 56 within within ADP IN _ _ _ _ _ 57 the the DET DT Definite=Def|PronType=Art _ _ _ _ 58 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 , , PUNCT , _ _ _ _ _ 60 the the DET DT Definite=Def|PronType=Art _ _ _ _ 61 lambda lambda NOUN NN Number=Sing _ _ _ _ 62 genes gene NOUN NNS Number=Plur _ _ _ _ 63 being be AUX VBG VerbForm=Ger _ _ _ _ 64 more more ADV RBR _ _ _ _ _ 65 interior interior ADJ JJ Degree=Pos _ _ _ _ 66 when when ADV WRB PronType=Int _ _ _ _ 67 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 68 with with ADP IN _ _ _ _ _ 69 the the DET DT Definite=Def|PronType=Art _ _ _ _ 70 gamma gamma NOUN NN Number=Sing _ _ _ _ 71 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 72 . . PUNCT . _ _ _ _ _ # sent_id = 4929 # text = The data further show that these overall topographical distributions are independent of gene transcriptional activity and are conserved in different cell types. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 further further ADV RB _ _ _ _ _ 4 show show VERB VB VerbForm=Inf _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 overall overall ADJ JJ Degree=Pos _ _ _ _ 8 topographical topographical ADJ JJ Degree=Pos _ _ _ _ 9 distributions distribution NOUN NNS Number=Plur _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 independent independent ADJ JJ Degree=Pos _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 gene gene PRON NN Number=Sing _ _ _ _ 14 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 conserved conserve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 different different ADJ JJ Degree=Pos _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 4930 # text = Although subtle gene movements within those defined topographical regions cannot be excluded by this study, the results indicate that tissue specificity of gene expression is not accompanied by drastic changes in gene nuclear topography, rather suggesting that gene organization within the nucleus may be primarily dependent on structural constraints imposed on the respective chromosomes. 1 Although although SCONJ IN _ _ _ _ _ 2 subtle subtle ADJ JJ Degree=Pos _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ _ 4 movements movement NOUN NNS Number=Plur _ _ _ _ 5 within within ADP IN _ _ _ _ _ 6 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 7 defined define VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 topographical topographical ADJ JJ Degree=Pos _ _ _ _ 9 regions region NOUN NNS Number=Plur _ _ _ _ 10 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 11 not not PART RB _ _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 excluded exclude VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 16 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 results result NOUN NNS Number=Plur _ _ _ _ 20 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 tissue tissue ADJ JJ Degree=Pos _ _ _ _ 23 specificity specificity NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 not not PART RB _ _ _ _ _ 29 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 drastic drastic ADJ JJ Degree=Pos _ _ _ _ 32 changes change NOUN NNS Number=Plur _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 gene gene ADJ JJ Degree=Pos _ _ _ _ 35 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 36 topography topography NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 rather rather ADV RB _ _ _ _ _ 39 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 40 that that SCONJ IN _ _ _ _ _ 41 gene gene ADJ JJ Degree=Pos _ _ _ _ 42 organization organization NOUN NN Number=Sing _ _ _ _ 43 within within ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 46 may may AUX MD VerbForm=Fin _ _ _ _ 47 be be AUX VB VerbForm=Inf _ _ _ _ 48 primarily primarily ADV RB _ _ _ _ _ 49 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 50 on on ADP IN _ _ _ _ _ 51 structural structural ADJ JJ Degree=Pos _ _ _ _ 52 constraints constraint NOUN NNS Number=Plur _ _ _ _ 53 imposed impose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 54 on on ADP IN _ _ _ _ _ 55 the the DET DT Definite=Def|PronType=Art _ _ _ _ 56 respective respective ADJ JJ Degree=Pos _ _ _ _ 57 chromosomes chromosome NOUN NNS Number=Plur _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4931 # text = Document 003001153 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001153 003001153 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4932 # text = V3 loop of human immunodeficiency virus type 1 suppresses interleukin 2-induced T cell growth [published erratum appears in AIDS Res Hum Retroviruses 1997 May 1;13(7):633] 1 V3 V3 NUM CD NumType=Card _ _ _ _ 2 loop loop NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 type type NOUN NN Number=Sing _ _ _ _ 8 1 1 NUM CD NumType=Card _ _ _ _ 9 suppresses suppress NOUN NNS Number=Plur _ _ _ _ 10 interleukin interleukin VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 growth growth NOUN NN Number=Sing _ _ _ _ 17 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 published publish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 erratum erratum NOUN NN Number=Sing _ _ _ _ 20 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 AIDS aids NOUN NN Number=Sing _ _ _ _ 23 Res res NOUN NNS Number=Plur _ _ _ _ 24 Hum Hum PROPN NNP Number=Sing _ _ _ _ 25 Retroviruses Retroviruse VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 1997 1997 NUM CD NumType=Card _ _ _ _ 27 May May PROPN NNP Number=Sing _ _ _ _ 28 1;13 1;13 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 :633 :633 NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 4933 # text = We tested the effect of three linear or two loop peptides derived from the V3 region of the HTLV-III BH10 clone or the SF2 strain of human immunodeficiency virus type 1 on IL-2-driven T cell proliferation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 tested test VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effect effect NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 three three NUM CD NumType=Card _ _ _ _ 7 linear linear NOUN NN Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 two two NUM CD NumType=Card _ _ _ _ 10 loop loop ADJ JJ Degree=Pos _ _ _ _ 11 peptides peptide NOUN NNS Number=Plur _ _ _ _ 12 derived derive VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 V3 V3 NUM CD NumType=Card _ _ _ _ 16 region region NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 III iii NUM CD NumType=Card _ _ _ _ 22 BH10 BH10 NUM CD NumType=Card _ _ _ _ 23 clone clone NOUN NN Number=Sing _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 SF2 Sf2 NOUN NN Number=Sing _ _ _ _ 27 strain strain NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 31 virus virus NOUN NN Number=Sing _ _ _ _ 32 type type NOUN NN Number=Sing _ _ _ _ 33 1 1 NUM CD NumType=Card _ _ _ _ 34 on on ADP IN _ _ _ _ _ 35 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 driven driven VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 T t PROPN NNP Number=Sing _ _ _ _ 41 cell cell NOUN NN Number=Sing _ _ _ _ 42 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 4934 # text = V3-BH10, which consists of 42 amino acids and has a loop structure, suppressed IL-2-driven proliferation of all IL-2-dependent cells [Kit225, ED-40515(+), KT-3, 7-day PHA-blasts, and fresh peripheral blood mononuclear cells] tested, whereas it did not suppress the cell growth of IL-2-independent cell lines (Hut102, Molt-4, and Jurkat). 1 V3 V3 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 -BH10 -BH10 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 consists consist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 42 42 NUM CD NumType=Card _ _ _ _ 8 amino amino ADJ JJ Degree=Pos _ _ _ _ 9 acids acid NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 loop loop NOUN NN Number=Sing _ _ _ _ 14 structure structure NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 driven driven VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 all all DET DT _ _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 Kit Kit PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 225 225 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 ED-40515 ED-40515 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 (+) (+) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 KT KT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 -3 -3 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 day day NOUN NN Number=Sing _ _ _ _ 44 PHA PHa NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 blasts blast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 fresh fresh ADJ JJ Degree=Pos _ _ _ _ 50 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 51 blood blood NOUN NN Number=Sing _ _ _ _ 52 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 53 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 54 ] ] PUNCT -RRB- _ _ _ _ _ 55 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 56 , , PUNCT , _ _ _ _ _ 57 whereas whereas SCONJ IN _ _ _ _ _ 58 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 59 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 60 not not PART RB _ _ _ _ _ 61 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 62 the the DET DT Definite=Def|PronType=Art _ _ _ _ 63 cell cell NOUN NN Number=Sing _ _ _ _ 64 growth growth NOUN NN Number=Sing _ _ _ _ 65 of of ADP IN _ _ _ _ _ 66 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 67 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 68 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 69 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 70 independent independent ADJ JJ Degree=Pos _ _ _ _ 71 cell cell NOUN NN Number=Sing _ _ _ _ 72 lines line NOUN NNS Number=Plur _ _ _ _ 73 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 74 Hut Hut PROPN NNP Number=Sing _ _ _ SpaceAfter=No 75 102 102 NUM CD NumType=Card _ _ _ SpaceAfter=No 76 , , PUNCT , _ _ _ _ _ 77 Molt Molt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 78 - - SYM SYM _ _ _ _ SpaceAfter=No 79 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 80 , , PUNCT , _ _ _ _ _ 81 and and CCONJ CC _ _ _ _ _ 82 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 83 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 84 . . PUNCT . _ _ _ _ _ # sent_id = 4935 # text = This suppressive effect was also seen in IL-2-driven cell growth of CD8-positive lymphocytes purified from 7-day PHA-blasts, indicating that CD4 molecules were not required for the suppression. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 suppressive suppressive ADJ JJ Degree=Pos _ _ _ _ 3 effect effect NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 growth growth NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 CD8 CD8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 positive positive ADJ JJ Degree=Pos _ _ _ _ 19 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 20 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 day day NOUN NN Number=Sing _ _ _ _ 25 PHA PHa NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 blasts blast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 30 that that SCONJ IN _ _ _ _ _ 31 CD4 Cd4 PROPN NNP Number=Sing _ _ _ _ 32 molecules molecule NOUN NNS Number=Plur _ _ _ _ 33 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 not not PART RB _ _ _ _ _ 35 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 for for ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 suppression suppression NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 4936 # text = The treatment with anti-V3 loop monoclonal antibody (902 antibody) completely abolished the suppressive effect of V3-BH10. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 treatment treatment NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 anti anti X AFX _ _ _ _ SpaceAfter=No 5 -V3 -V3 NUM CD NumType=Card _ _ _ _ 6 loop loop NOUN NN Number=Sing _ _ _ _ 7 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 8 antibody antibody NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 902 902 NUM CD NumType=Card _ _ _ _ 11 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 completely completely ADV RB _ _ _ _ _ 14 abolished abolish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 suppressive suppressive ADJ JJ Degree=Pos _ _ _ _ 17 effect effect NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 V3- v3- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 BH10 BH10 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4937 # text = In addition, V3-BH10 generated the arrest of Kit225 cells and also purified CD8-positive lymphocytes in G1 phase in the presence of IL-2. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 V3 V3 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT : _ _ _ _ SpaceAfter=No 6 BH Bh NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 10 10 NUM CD NumType=Card _ _ _ _ 8 generated generate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 arrest arrest NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 Kit225 Kit225 NUM CD NumType=Card _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 also also ADV RB _ _ _ _ _ 16 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 CD8 CD8 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 positive positive ADJ JJ Degree=Pos _ _ _ _ 20 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 G1 g1 PROPN NNP Number=Sing _ _ _ _ 23 phase phase NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 presence presence NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4938 # text = Neither chromatin condensation nor DNA fragmentation was detected in Kit225 cells cultured with V3-BH10 and IL-2. 1 Neither neither DET DT _ _ _ _ _ 2 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 3 condensation condensation NOUN NN Number=Sing _ _ _ _ 4 nor nor CCONJ CC _ _ _ _ _ 5 DNA dna NOUN NN Number=Sing _ _ _ _ 6 fragmentation fragmentation NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 Kit Kit PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 225 225 NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 cultured culture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 V3- v3- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 BH10 BH10 PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 IL il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4939 # text = V3-BH10 neither blocked radiolabeled IL-2 binding to IL-2 receptors nor affected tyrosyl phosphorylation of several cellular proteins (p120, p98, p96, p54, and p38), which is immediately induced by IL-2 stimulation. 1 V3 V3 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 BH Bh NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 10 10 NUM CD NumType=Card _ _ _ _ 5 neither neither NOUN NN Number=Sing _ _ _ _ 6 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 radiolabeled radiolabel VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 receptors receptor NOUN NNS Number=Plur _ _ _ _ 17 nor nor CCONJ CC _ _ _ _ _ 18 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 tyrosyl tyrosyl NOUN NN Number=Sing _ _ _ _ 20 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 several several ADJ JJ Degree=Pos _ _ _ _ 23 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 24 proteins protein NOUN NNS Number=Plur _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 p120 p120 NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 p98 p98 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 p96 p96 NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 p54 p54 NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 p38 p38 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 which which PRON WDT PronType=Rel _ _ _ _ 39 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 40 immediately immediately ADV RB _ _ _ _ _ 41 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 by by ADP IN _ _ _ _ _ 43 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 2 2 NUM CD NumType=Card _ _ _ _ 46 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 4940 # text = However, V3-BH10 enhanced IL-2-induced mRNA expression of c-fos but not c-myc or junB. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 V3 V3 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT : _ _ _ _ SpaceAfter=No 5 BH Bh NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 10 10 NUM CD NumType=Card _ _ _ _ 7 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 -induced -induced ADJ JJ Degree=Pos _ _ _ _ 12 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 fos fo NOUN NNS Number=Plur _ _ _ _ 18 but but CCONJ CC _ _ _ _ _ 19 not not ADV RB _ _ _ _ _ 20 c- c- SYM NFP _ _ _ _ SpaceAfter=No 21 myc myc ADJ JJ Degree=Pos _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 junB junb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4941 # text = Thus, the binding of V3 loop of gp120 to the cell surface molecule(s) appears to affect intracellular IL-2 signaling, which leads to the suppression of IL-2-induced T cell growth. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 binding binding NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 V3 V3 NUM CD NumType=Card _ _ _ _ 7 loop loop NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 gp120 gp120 NUM CD NumType=Card _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 surface surface NOUN NN Number=Sing _ _ _ _ 14 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 s s X AFX _ _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 affect affect VERB VB VerbForm=Inf _ _ _ _ 21 intracellular intracelular ADJ JJ Degree=Pos _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 which which PRON WDT PronType=Rel _ _ _ _ 28 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 suppression suppression NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 T t PROPN NNP Number=Sing _ _ _ _ 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4942 # text = Document 003001156 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001156 003001156 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4943 # text = T cell-specific negative regulation of transcription of the human cytokine IL-4. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 negative negative ADJ JJ Degree=Pos _ _ _ _ 6 regulation regulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 13 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT : _ _ _ _ SpaceAfter=No 15 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4944 # text = IL-4 secreted by activated T cells is a pleiotropic cytokine affecting growth and differentiation of diverse cell types such as T cells, B cells, and mast cells. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ _ 4 secreted secret VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 pleiotropic pleiotropic ADJ JJ Degree=Pos _ _ _ _ 12 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 13 affecting affect VERB VBG VerbForm=Ger _ _ _ _ 14 growth growth NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 diverse diverse ADJ JJ Degree=Pos _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 types type NOUN NNS Number=Plur _ _ _ _ 21 such such ADJ JJ Degree=Pos _ _ _ _ 22 as as ADP IN _ _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 B b ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 mast mast ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4945 # text = We investigated the upstream regulatory elements of the human IL-4 promoter. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 5 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 6 elements element NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 4 4 NUM CD NumType=Card _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 4946 # text = A novel T cell-specific negative regulatory element (NRE) composed of two protein-binding sites were mapped in the 5' flanking region of the IL-4 gene: -311CTCCCTTCT-303 (NRE-I) and -288CTTTTTGCTT-TGC-300 (NRE-II). 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 novel novel ADJ JJ Degree=Pos _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 specific specific ADJ JJ Degree=Pos _ _ _ _ 7 negative negative ADJ JJ Degree=Pos _ _ _ _ 8 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 9 element element NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 NRE NRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 composed compose VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 two two NUM CD NumType=Card _ _ _ _ 16 protein- protein- PUNCT : _ _ _ _ SpaceAfter=No 17 binding binding VERB VBG VerbForm=Ger _ _ _ _ 18 sites site NOUN NNS Number=Plur _ _ _ _ 19 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 mapped map VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 ' ' PUNCT `` _ _ _ _ _ 25 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 26 region region NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 4 4 NUM CD NumType=Card _ _ _ _ 32 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 : : PUNCT : _ _ _ _ _ 34 -311CTCCCTTCT-303 -311CTCCCTTCT-303 NUM CD NumType=Card _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 NRE Nre NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT , _ _ _ _ SpaceAfter=No 38 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 -288CTTTTTGCTT-TGC -288ctttttgctt-tgc NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 300 300 NUM CD NumType=Card _ _ _ _ 44 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 45 NRE Nre ADV RB PronType=Dem _ _ _ SpaceAfter=No 46 - - SYM SYM _ _ _ _ SpaceAfter=No 47 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 4947 # text = A T cell-specific protein Neg-1 and a ubiquitous protein Neg-2 binding to NRE-I and NRE-II, respectively, were identified. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 T T PROPN NNP Number=Sing _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 Neg Neg NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 Neg Neg NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 NRE NRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 NRE NRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 II II PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4948 # text = Furthermore, a positive regulatory element was found 45 bp downstream of the NRE. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 positive positive ADJ JJ Degree=Pos _ _ _ _ 5 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 6 element element NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 45 45 NUM CD NumType=Card _ _ _ _ 10 bp bp NOUN NN Number=Sing _ _ _ _ 11 downstream downstream NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 NRE Nre NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 4949 # text = The enhancer activity of the PRE was completely suppressed when the NRE was present. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 3 activity activity NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 PRE pre PROPN NNP Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 completely completely ADV RB _ _ _ _ _ 9 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 when when ADV WRB PronType=Int _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 NRE Nre NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 present present ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 4950 # text = These data suggest that IL-4 promoter activity is normally down-regulated by an NRE via repression of the enhancer positive regulatory element. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 4 4 NUM CD NumType=Card _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 normally normally ADV RB _ _ _ _ _ 12 down down ADV RB _ _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 NRE Nre PROPN NNP Number=Sing _ _ _ _ 18 via via ADP IN _ _ _ _ _ 19 repression repression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 23 positive positive ADJ JJ Degree=Pos _ _ _ _ 24 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 25 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4951 # text = These data may have implications for the stringent control of IL-4 expression in T cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 may may AUX MD VerbForm=Fin _ _ _ _ 4 have have VERB VB VerbForm=Inf _ _ _ _ 5 implications implication NOUN NNS Number=Plur _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 stringent stringent ADJ JJ Degree=Pos _ _ _ _ 9 control control NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 4 4 NUM CD NumType=Card _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4952 # text = Document 003001157 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001157 003001157 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4953 # text = A CD28-associated signaling pathway leading to cytokine gene transcription and T cell proliferation without TCR engagement. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 CD28 Cd28 NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 -associated -associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 5 pathway pathway NOUN NN Number=Sing _ _ _ _ 6 leading lead VERB VBG VerbForm=Ger _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 cytokine cytokine VERB VB VerbForm=Inf _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 T t NOUN NN Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 15 without without ADP IN _ _ _ _ _ 16 TCR Tcr NOUN NN Number=Sing _ _ _ _ 17 engagement engagement NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4954 # text = Stimulation of resting human T cells with the CD28-specific mAb BW 828 induces proliferation and cytokine synthesis without further requirement for TCR coengagement. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of SCONJ IN _ _ _ _ _ 3 resting rest VERB VBG VerbForm=Ger _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 CD28 Cd28 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 specific specific ADJ JJ Degree=Pos _ _ _ _ 12 mAb mAb PROPN NNP Number=Sing _ _ _ _ 13 BW BW PROPN NNP Number=Sing _ _ _ _ 14 828 828 NUM CD NumType=Card _ _ _ _ 15 induces induce NOUN NNS Number=Plur _ _ _ _ 16 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 19 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 20 without without ADP IN _ _ _ _ _ 21 further further ADJ JJ Degree=Pos _ _ _ _ 22 requirement requirement NOUN NN Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 TCR Tcr ADJ JJR Degree=Cmp _ _ _ _ 25 coengagement coengagement NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4955 # text = This observation prompted us to postulate that signal 2 (costimulatory signal) alone without signal 1 (TCR signal) can activate T cells. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 observation observation NOUN NN Number=Sing _ _ _ _ 3 prompted prompt VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 us we PRON PRP Case=Acc|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 postulate postulate VERB VB VerbForm=Inf _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 signal signal NOUN NN Number=Sing _ _ _ _ 9 2 2 NUM CD NumType=Card _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 costimulatory costimulatory NOUN NN Number=Sing _ _ _ _ 12 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 alone alone ADV RB _ _ _ _ _ 15 without without ADP IN _ _ _ _ _ 16 signal signal NOUN NN Number=Sing _ _ _ _ 17 1 1 NUM CD NumType=Card _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 TCR Tcr NOUN NN Number=Sing _ _ _ _ 20 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 can can AUX MD VerbForm=Fin _ _ _ _ 23 activate activate VERB VB VerbForm=Inf _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 4956 # text = To test whether this putative function of CD28 is mediated via a particular signaling pathway, we compared early signaling events initiated in resting T cells by the stimulatory mAb BW 828 with signals triggered by the nonstimulating CD28 mAb 9.3. Stimulation of T cells with BW 828 induced an increase in intracellular Ca2+, but did not lead to detectable activation of the protein kinases p56(lck) and c-Raf-1. 1 To to PART TO _ _ _ _ _ 2 test test VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 putative putative ADJ JJ Degree=Pos _ _ _ _ 6 function function NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 via via ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 particular particular ADJ JJ Degree=Pos _ _ _ _ 14 signaling signaling NOUN NN Number=Sing _ _ _ _ 15 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 18 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 early early ADV RB Degree=Pos _ _ _ _ 20 signaling signale VERB VBG VerbForm=Ger _ _ _ _ 21 events event NOUN NNS Number=Plur _ _ _ _ 22 initiated initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 in in SCONJ IN _ _ _ _ _ 24 resting rest VERB VBG VerbForm=Ger _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 stimulatory stimulatory ADJ JJ Degree=Pos _ _ _ _ 30 mAb mAb PROPN NNP Number=Sing _ _ _ _ 31 BW BW PROPN NNP Number=Sing _ _ _ _ 32 828 828 NUM CD NumType=Card _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 signals signal NOUN NNS Number=Plur _ _ _ _ 35 triggered trigger VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 nonstimulating nonstimulating NOUN NN Number=Sing _ _ _ _ 39 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 40 mAb mAb PROPN NNP Number=Sing _ _ _ _ 41 9.3 9.3 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ 43 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 T t PROPN NNP Number=Sing _ _ _ _ 46 cells cell NOUN NNS Number=Plur _ _ _ _ 47 with with ADP IN _ _ _ _ _ 48 BW BW PROPN NNP Number=Sing _ _ _ _ 49 828 828 NUM CD NumType=Card _ _ _ _ 50 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 51 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 52 increase increase NOUN NN Number=Sing _ _ _ _ 53 in in ADP IN _ _ _ _ _ 54 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 55 Ca2 Ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 + + SYM SYM _ _ _ _ SpaceAfter=No 57 , , PUNCT , _ _ _ _ _ 58 but but CCONJ CC _ _ _ _ _ 59 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 60 not not PART RB _ _ _ _ _ 61 lead lead VERB VB VerbForm=Inf _ _ _ _ 62 to to ADP IN _ _ _ _ _ 63 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 64 activation activation NOUN NN Number=Sing _ _ _ _ 65 of of ADP IN _ _ _ _ _ 66 the the DET DT Definite=Def|PronType=Art _ _ _ _ 67 protein protein NOUN NN Number=Sing _ _ _ _ 68 kinases kinase NOUN NNS Number=Plur _ _ _ _ 69 p56 p56 NUM CD NumType=Card _ _ _ SpaceAfter=No 70 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 71 lck lck NOUN NN Number=Sing _ _ _ SpaceAfter=No 72 ) ) PUNCT -RRB- _ _ _ _ _ 73 and and CCONJ CC _ _ _ _ _ 74 c- c- SYM NFP _ _ _ _ SpaceAfter=No 75 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 76 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 77 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 78 . . PUNCT . _ _ _ _ _ # sent_id = 4957 # text = This pathway resulted in the induction of the transcription factors NF-kappa B, NF-AT, and proteins binding to the CD28 response element of the IL-2 promoter. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 pathway pathway NOUN NN Number=Sing _ _ _ _ 3 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 induction induction NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ 14 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 AT at PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 proteins protein NOUN NNS Number=Plur _ _ _ _ 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 26 response response NOUN NN Number=Sing _ _ _ _ 27 element element NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 2 2 NUM CD NumType=Card _ _ _ _ 33 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4958 # text = On the other hand, stimulation of T cells with mAb 9.3 increased the level of intracellular Ca2+ and triggered the activation of p56(lck) and c-Raf-1, but was unable to induce the binding of transcription factors to the IL-2 promoter. 1 On on ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 hand hand NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 mAb mAb PROPN NNP Number=Sing _ _ _ _ 12 9.3 9.3 NUM CD NumType=Card _ _ _ _ 13 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 level level NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 18 Ca2 ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 + + SYM SYM _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 triggered trigger VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 p56 p56 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 lck lck NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 Raf Raf NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 but but CCONJ CC _ _ _ _ _ 37 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 38 unable unable ADJ JJ Degree=Pos _ _ _ _ 39 to to PART TO _ _ _ _ _ 40 induce induce VERB VB VerbForm=Inf _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 binding binding NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 transcription transcription NOUN NN Number=Sing _ _ _ _ 45 factors factor NOUN NNS Number=Plur _ _ _ _ 46 to to ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 2 2 NUM CD NumType=Card _ _ _ _ 51 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 4959 # text = In contrast to the differential signaling of BW 828 and 9.3 in resting 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 differential differential ADJ JJ Degree=Pos _ _ _ _ 6 signaling signaling NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 BW BW PROPN NNP Number=Sing _ _ _ _ 9 828 828 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 9.3 9.3 NUM CD NumType=Card _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 resting rest NOUN NN Number=Sing _ _ _ _ # sent_id = 4960 # text = T cells, the two mAbs exhibited a similar pattern of early signaling events in activated T cells and Jurkat cells (p56(lck) activation, association of phosphatidylinositol 3-kinase with CD28), indicating that the signaling capacity of CD28 changes with activation. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 two two NUM CD NumType=Card _ _ _ _ 6 mAbs mAbs NOUN NNS Number=Plur _ _ _ _ 7 exhibited exhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 similar similar ADJ JJ Degree=Pos _ _ _ _ 10 pattern pattern NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 early early ADJ JJ Degree=Pos _ _ _ _ 13 signaling signaling NOUN NN Number=Sing _ _ _ _ 14 events event NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 p56 p56 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 lck lck NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 association association NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 phosphatidylinositol phosphatidylinositol NOUN NN Number=Sing _ _ _ _ 32 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 - - PUNCT : _ _ _ _ SpaceAfter=No 34 kinase kinase NOUN NN Number=Sing _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 CD28 CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 40 that that SCONJ IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 signaling signaling NOUN NN Number=Sing _ _ _ _ 43 capacity capacity NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 CD28 CD28 NUM CD NumType=Card _ _ _ _ 46 changes change NOUN NNS Number=Plur _ _ _ _ 47 with with ADP IN _ _ _ _ _ 48 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 4961 # text = These data support the view that stimulation through CD28 can induce some effector functions in T cells and suggest that this capacity is associated with a particular pattern of early signaling events. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 support support VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 view view NOUN NN Number=Sing _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 8 through through ADP IN _ _ _ _ _ 9 CD28 CD28 NOUN NN Number=Sing _ _ _ _ 10 can can AUX MD VerbForm=Fin _ _ _ _ 11 induce induce VERB VB VerbForm=Inf _ _ _ _ 12 some some DET DT _ _ _ _ _ 13 effector effector NOUN NN Number=Sing _ _ _ _ 14 functions function NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 22 capacity capacity NOUN NN Number=Sing _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 particular particular ADJ JJ Degree=Pos _ _ _ _ 28 pattern pattern NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 early early ADJ JJ Degree=Pos _ _ _ _ 31 signaling signaling NOUN NN Number=Sing _ _ _ _ 32 events event NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4962 # text = Document 003001159 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001159 003001159 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4963 # text = Thapsigargin induces IL-2 receptor alpha-chain in human peripheral and Jurkat T cells via a protein kinase C-independent mechanism. 1 Thapsigargin Thapsigargin PROPN NNP Number=Sing _ _ _ _ 2 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 alpha- alpha- SYM SYM _ _ _ _ SpaceAfter=No 8 chain chain NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 peripheral peripheral NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 14 T T PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 via via ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 kinase kinase NOUN NN Number=Sing _ _ _ _ 20 C c PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 independent independent ADJ JJ Degree=Pos _ _ _ _ 23 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4964 # text = Thapsigargin (TG), an inhibitor of Ca(2+)-ATPase, depletes intracellular Ca2+ stores and induces a sustained Ca2+ influx without altering phosphatidyl inositol levels. 1 Thapsigargin Thapsigargin PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 TG TG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 Ca ca PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 2+) 2+) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 ATPase ATPase INTJ UH _ _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 depletes deplete VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 intracellular intracelular ADJ JJ Degree=Pos _ _ _ _ 17 Ca2 Ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 + + SYM SYM _ _ _ _ _ 19 stores store NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 sustained sustain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 Ca2 ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 + + SYM SYM _ _ _ _ _ 26 influx influx NOUN NN Number=Sing _ _ _ _ 27 without without SCONJ IN _ _ _ _ _ 28 altering alter VERB VBG VerbForm=Ger _ _ _ _ 29 phosphatidyl phosphatidyl NOUN NN Number=Sing _ _ _ _ 30 inositol inositol NOUN NN Number=Sing _ _ _ _ 31 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4965 # text = TG plus phorbol myristate acetate (PMA) but not TG alone induced IL-2 in Jurkat T cells, suggesting that TG had no effect on protein kinase C (PKC). 1 TG TG NOUN NN Number=Sing _ _ _ _ 2 plus plus CCONJ CC _ _ _ _ _ 3 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 4 myristate myristate NOUN NN Number=Sing _ _ _ _ 5 acetate acetate NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 TG TG VERB VB VerbForm=Inf _ _ _ _ 12 alone alone ADJ JJ Degree=Pos _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 TG TG PROPN NNP Number=Sing _ _ _ _ 25 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 no no DET DT _ _ _ _ _ 27 effect effect NOUN NN Number=Sing _ _ _ _ 28 on on ADP IN _ _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ _ 30 kinase kinase NOUN NN Number=Sing _ _ _ _ 31 C C PROPN NNP Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 4966 # text = However, TG induced increases in IL-2R alpha protein as well as IL-2R alpha mRNA in Jurkat T cells in a dose-dependent manner. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 TG TG VERB VBG VerbForm=Ger _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 increases increase NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 X LS _ _ _ _ SpaceAfter=No 10 R r X GW _ _ _ _ _ 11 alpha alpha X FW Foreign=Yes _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 as as ADV RB _ _ _ _ _ 14 well well ADV RB Degree=Pos _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2R 2R PROPN NNP Number=Sing _ _ _ _ 19 alpha alpha ADP IN _ _ _ _ _ 20 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 30 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4967 # text = A similar increase in IL-2R alpha by TG was also observed in human peripheral T cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 similar similar ADJ JJ Degree=Pos _ _ _ _ 3 increase increase NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 2 2 X LS _ _ _ _ SpaceAfter=No 8 R r X GW _ _ _ _ _ 9 alpha alpha X FW Foreign=Yes _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 TG TG PROPN NNP Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 also also ADV RB _ _ _ _ _ 14 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 4968 # text = Further, like PMA, TG markedly induced NF kappa B in Jurkat T cells. 1 Further further ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 like like ADP IN _ _ _ _ _ 4 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 TG TG PROPN NNP Number=Sing _ _ _ _ 7 markedly markedly ADV RB _ _ _ _ _ 8 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ _ 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B B PROPN NNP Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4969 # text = However, TG and PMA exhibited a synergistic action on IL-2R alpha expression, suggesting that TG and PMA induce IL-2R alpha through distinct pathways. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 TG TG PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 PMA PMA PROPN NNP Number=Sing _ _ _ _ 6 exhibited exhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 9 action action NOUN NN Number=Sing _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2R 2R PROPN NNP Number=Sing _ _ _ _ 14 alpha alpha NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 TG TG PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 PMA PMA PROPN NNP Number=Sing _ _ _ _ 22 induce induce PROPN NNP Number=Sing _ _ _ _ 23 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 X LS _ _ _ _ SpaceAfter=No 26 R r X GW _ _ _ _ _ 27 alpha alpha X FW Foreign=Yes _ _ _ _ 28 through through ADP IN _ _ _ _ _ 29 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 30 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4970 # text = PMA- but not TG-induced IL-2R alpha is inhibited by the PKC inhibitor H7, whereas TG- but not PMA-induced IL-2R alpha was inhibited by cholera toxin, forskolin and 1,9-dideoxy forskolin. 1 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ _ 3 but but CCONJ CC _ _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 TG- TG- PUNCT : _ _ _ _ SpaceAfter=No 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2R 2r PROPN NNP Number=Sing _ _ _ _ 10 alpha alpha PROPN NNP Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 PKC PKC PROPN NNP Number=Sing _ _ _ _ 16 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 17 H7 H7 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 whereas whereas SCONJ IN _ _ _ _ _ 20 TG TG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 not not PART RB _ _ _ _ _ 24 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 2R 2r PROPN NNP Number=Sing _ _ _ _ 30 alpha alpha PROPN NNP Number=Sing _ _ _ _ 31 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 32 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 cholera cholera NOUN NN Number=Sing _ _ _ _ 35 toxin toxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 forskolin forskolin VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ SpaceAfter=No 41 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 dideoxy dideoxy NOUN NN Number=Sing _ _ _ _ 44 forskolin forskolin NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 4971 # text = In toto, these results suggest that TG induces IL-2R alpha in human T cells through a PKC-independent pathway. 1 In in ADP IN _ _ _ _ _ 2 toto toto NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 TG TG PRON NN Number=Sing _ _ _ _ 9 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 X LS _ _ _ _ SpaceAfter=No 13 R r X GW _ _ _ _ _ 14 alpha alpha X FW Foreign=Yes _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 through through ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 PKC Pkc NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 independent independent ADJ JJ Degree=Pos _ _ _ _ 24 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4972 # text = Document 003001163 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001163 003001163 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4973 # text = Functions of glutathione and glutathione disulfide in immunology and immunopathology. 1 Functions function NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 glutathione glutathione NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 glutathione glutathione NOUN NN Number=Sing _ _ _ _ 6 disulfide disulfide NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 immunology immunology NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 immunopathology immunopathology NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4974 # text = Even a moderate increase in the cellular cysteine supply elevates the intracellular glutathione (GSH) and glutathione disulfide (GSSG) levels and potentiates immunological functions of lymphocytes in vitro. 1 Even even ADV RB _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 moderate moderate ADJ JJ Degree=Pos _ _ _ _ 4 increase increase NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 8 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 9 supply supply NOUN NN Number=Sing _ _ _ _ 10 elevates elevate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 13 glutathione glutathione NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 GSH GSH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 glutathione glutathione NOUN NN Number=Sing _ _ _ _ 19 disulfide disulfide NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 GSSG GSSG NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 levels level NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 potentiates potentiate NOUN NNS Number=Plur _ _ _ _ 26 immunological immunological ADJ JJ Degree=Pos _ _ _ _ 27 functions function NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 4975 # text = At low GSSG levels, T cells cannot optimally activate the immunologically important transcription factor NF kappa B, whereas high GSSG levels inhibit the DNA binding activity of NF kappa B. 1 At at ADP IN _ _ _ _ _ 2 low low ADJ JJ Degree=Pos _ _ _ _ 3 GSSG GSSG NOUN NN Number=Sing _ _ _ _ 4 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 9 not not PART RB _ _ _ _ _ 10 optimally optimally ADV RB _ _ _ _ _ 11 activate activate VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 immunologically immunologically ADV RB _ _ _ _ _ 14 important important ADJ JJ Degree=Pos _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ _ 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 whereas whereas SCONJ IN _ _ _ _ _ 22 high high ADJ JJ Degree=Pos _ _ _ _ 23 GSSG Gssg NOUN NN Number=Sing _ _ _ _ 24 levels level NOUN NNS Number=Plur _ _ _ _ 25 inhibit inhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 DNA dna NOUN NN Number=Sing _ _ _ _ 28 binding bind VERB VBG VerbForm=Ger _ _ _ _ 29 activity activity NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ _ 32 kappa kappa PROPN NNP Number=Sing _ _ _ _ 33 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 4976 # text = The effects of GSSG are antagonized by reduced thioredoxin (TRX). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 GSSG GSSG PRON NN Number=Sing _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 antagonized antagonize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 thioredoxin thioredoxin NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 TRX TRX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 4977 # text = As the protein tyrosine kinase activities p56lck and p59fyn are activated in intact cells by hydrogen peroxide, they are likely targets for GSSG action. 1 As as SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ _ 6 activities activity NOUN NNS Number=Plur _ _ _ _ 7 p56 p56 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 lck lck NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 p59fyn p59fyn NOUN NN Number=Sing _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 intact intact ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 hydrogen hydrogen NOUN NN Number=Sing _ _ _ _ 18 peroxide peroxide NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 likely likely ADJ JJ Degree=Pos _ _ _ _ 23 targets target NOUN NNS Number=Plur _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 GSSG GSSG ADJ JJ Degree=Pos _ _ _ _ 26 action action NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 4978 # text = These redox-regulated enzymes trigger signal cascades for NF kappa B activation and transduce signals from the T cell antigen receptor, from CD4 and CD8 molecules, and from the IL-2 receptor beta-chain. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 redox redox NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 enzymes enzyme NOUN NNS Number=Plur _ _ _ _ 6 trigger trigger ADV RBR _ _ _ _ _ 7 signal signal ADJ JJ Degree=Pos _ _ _ _ 8 cascades cascade NOUN NNS Number=Plur _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ _ 11 kappa kappa PROPN NNP Number=Sing _ _ _ _ 12 B b PROPN NNP Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 transduce transduce NOUN NN Number=Sing _ _ _ _ 16 signals signal NOUN NNS Number=Plur _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 T T PROPN NNP Number=Sing _ _ _ _ 20 cell cell PROPN NNP Number=Sing _ _ _ _ 21 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 22 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 CD8 CD8 PROPN NNP Number=Sing _ _ _ _ 28 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 from from ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 2 2 NUM CD NumType=Card _ _ _ _ 36 receptor receptor NOUN NN Number=Sing _ _ _ _ 37 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 chain chain NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 4979 # text = The effector phase of cytotoxic T cell responses and IL-2-dependent functions are inhibited even by a partial depletion of the intracellular GSH pool. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effector effector NOUN NN Number=Sing _ _ _ _ 3 phase phase NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 cytotoxic cytotoxic ADJ JJ Degree=Pos _ _ _ _ 6 T T PROPN NNP Number=Sing _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 responses response NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 functions function NOUN NNS Number=Plur _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 even even ADV RB _ _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 partial partial ADJ JJ Degree=Pos _ _ _ _ 22 depletion depletion NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 26 GSH Gsh NOUN NN Number=Sing _ _ _ _ 27 pool pool NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4980 # text = As signal transduction is facilitated by prooxidant conditions, we propose that the well-known immunological consequences of GSH depletion ultimately may be results of the accompanying GSSG deficiency. 1 As as ADP IN _ _ _ _ _ 2 signal signal NOUN NN Number=Sing _ _ _ _ 3 transduction transduction NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 facilitated facilitate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 prooxidant prooxidant ADJ JJ Degree=Pos _ _ _ _ 8 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 well well ADV RB Degree=Pos _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 immunological immunological ADJ JJ Degree=Pos _ _ _ _ 18 consequences consequence NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 GSH Gsh PROPN NNP Number=Sing _ _ _ _ 21 depletion depletion NOUN NN Number=Sing _ _ _ _ 22 ultimately ultimately ADV RB _ _ _ _ _ 23 may may AUX MD VerbForm=Fin _ _ _ _ 24 be be AUX VB VerbForm=Inf _ _ _ _ 25 results result NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 accompanying accompanying PROPN NNP Number=Sing _ _ _ _ 29 GSSG GSSG PROPN NNP Number=Sing _ _ _ _ 30 deficiency deficiency NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 4981 # text = As HIV-infected patients and SIV-infected rhesus macaques have, on the average, significantly decreased plasma cyst(e)ine and intracellular GSH levels, we also hypothesize that AIDS may be the consequence of a GSSG deficiency as well. 1 As as ADP IN _ _ _ _ _ 2 HIV- HIV- PUNCT : _ _ _ _ SpaceAfter=No 3 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 patients patient NOUN NNS Number=Plur _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 SIV- SIV- X GW _ _ _ _ SpaceAfter=No 7 infected infect ADJ JJ Degree=Pos _ _ _ _ 8 rhesus rhesus NOUN NN Number=Sing _ _ _ _ 9 macaques macaque NOUN NNS Number=Plur _ _ _ _ 10 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 average average NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 significantly significantly ADV RB _ _ _ _ _ 17 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 plasma plasma NOUN NN Number=Sing _ _ _ _ 19 cyst cyst NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 e e NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 ine ine ADJ JJ Degree=Pos _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 26 GSH Gsh NOUN NN Number=Sing _ _ _ _ 27 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 30 also also ADV RB _ _ _ _ _ 31 hypothesize hypothesize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 32 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 33 AIDS aids NOUN NN Number=Sing _ _ _ _ 34 may may AUX MD VerbForm=Fin _ _ _ _ 35 be be AUX VB VerbForm=Inf _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 consequence consequence NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 GSSG GSSG PROPN NNP Number=Sing _ _ _ _ 41 deficiency deficiency NOUN NN Number=Sing _ _ _ _ 42 as as ADV RB _ _ _ _ _ 43 well well ADV RB Degree=Pos _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4982 # text = Document 003001170 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001170 003001170 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4983 # text = Interleukin 6-induced differentiation of a human B cell line into IgM-secreting plasma cells is mediated by c-fos. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ _ 2 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT : _ _ _ _ SpaceAfter=No 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 line line NOUN NN Number=Sing _ _ _ _ 12 into into ADP IN _ _ _ _ _ 13 IgM Igm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 secreting secreting ADJ JJ Degree=Pos _ _ _ _ 16 plasma plasma NOUN NN Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 c- c- SYM NFP _ _ _ _ SpaceAfter=No 22 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4984 # text = The role of the protooncogene c-fos in interleukin (IL) 6-induced B cell differentiation was assessed. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 protooncogene protooncogene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 fos fo NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 assessed assess VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4985 # text = Treatment of SKW 6.4 cells with IL 6 induced a transient and early stimulation of c-fos sense mRNA expression. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 SKW SKW PROPN NNP Number=Sing _ _ _ _ 4 6.4 6.4 NUM CD NumType=Card _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 IL Il PROPN NNP Number=Sing _ _ _ _ 8 6 6 NUM CD NumType=Card _ _ _ _ 9 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 transient transient ADJ JJ Degree=Pos _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 early early ADJ JJ Degree=Pos _ _ _ _ 14 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 fos fos NOUN NN Number=Sing _ _ _ _ 19 sense sense NOUN NN Number=Sing _ _ _ _ 20 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4986 # text = The effect appeared within 30 min and returned to basal levels after 2 h. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 within within ADP IN _ _ _ _ _ 5 30 30 NUM CD NumType=Card _ _ _ _ 6 min min NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 returned return VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 basal basal ADJ JJ Degree=Pos _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ _ 12 after after ADP IN _ _ _ _ _ 13 2 2 NUM CD NumType=Card _ _ _ _ 14 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 4987 # text = The addition of antisense oligonucleotides to c-fos significantly inhibited IL 6-induced IgM production by SKW 6.4 cells (p less than 0.001), whereas control oligonucleotides had no inhibitory effect. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 antisense antisense ADJ JJ Degree=Pos _ _ _ _ 5 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 fos fo NOUN NNS Number=Plur _ _ _ _ 10 significantly significantly ADV RB _ _ _ _ _ 11 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ _ 13 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 IgM Igm NOUN NN Number=Sing _ _ _ _ 17 production production NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 SKW SKW PROPN NNP Number=Sing _ _ _ _ 20 6.4 6.4 NUM CD NumType=Card _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 p p NOUN NN Number=Sing _ _ _ _ 24 less less ADV RBR Degree=Cmp _ _ _ _ 25 than than ADP IN _ _ _ _ _ 26 0.001 0.001 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 whereas whereas SCONJ IN _ _ _ _ _ 30 control control NOUN NN Number=Sing _ _ _ _ 31 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 32 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 33 no no DET DT _ _ _ _ _ 34 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 35 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 4988 # text = These results indicate that activation of c-fos is involved in IL 6-induced differentiation of SKW 6.4 cells into IgM-secreting cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 fos fos NOUN NNS Number=Plur _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 involved involved ADJ JJ Degree=Pos _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ _ 14 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 SKW SKW PROPN NNP Number=Sing _ _ _ _ 20 6.4 6.4 NUM CD NumType=Card _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 into into ADP IN _ _ _ _ _ 23 IgM Igm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 secreting secreting ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 4989 # text = Document 003001174 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001174 003001174 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 4990 # text = Dopamine stimulates expression of the human immunodeficiency virus type 1 via NF-kappaB in cells of the immune system. 1 Dopamine Dopamine PRON PRP _ _ _ _ _ 2 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 8 virus virus NOUN NN Number=Sing _ _ _ _ 9 type type NOUN NN Number=Sing _ _ _ _ 10 1 1 NUM CD NumType=Card _ _ _ _ 11 via via ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 immune immune ADJ JJ Degree=Pos _ _ _ _ 20 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 4991 # text = Recent studies have reported that lymphocytes produce, transport and bind dopamine present in plasma. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 reported report VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 produce produce NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 transport transport NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 bind bind VERB VB VerbForm=Inf _ _ _ _ 12 dopamine dopamine PRON PRP _ _ _ _ _ 13 present present VERB VB VerbForm=Inf _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 plasma plasma NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 4992 # text = However, the action of dopamine on HIV-1 gene expression in cells of the immune system has not yet been examined. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 action action NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 dopamine dopamine NOUN NN Number=Sing _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 immune immune ADJ JJ Degree=Pos _ _ _ _ 18 system system NOUN NN Number=Sing _ _ _ _ 19 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 yet yet ADV RB _ _ _ _ _ 22 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 23 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4993 # text = Here, we have investigated the regulation of HIV-1 expression by dopamine in Jurkat T cells and in primary blood mononuclear cells (PBMC). 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 regulation regulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 dopamine dopamine NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 17 T T PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 primary primary ADJ JJ Degree=Pos _ _ _ _ 22 blood blood NOUN NN Number=Sing _ _ _ _ 23 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 PBMC PBMC NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 4994 # text = HIV-1 replication was increased by dopamine, which correlated with the increased levels of HIV-1 transactivation. 1 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 replication replication NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 dopamine dopamine NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 which which PRON WDT PronType=Rel _ _ _ _ 11 correlated correlate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 levels level NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 transactivation transactivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 4995 # text = Our transient expression data revealed that dopamine stimulated transcription through the NF-kappaB element present in the long terminal repeat. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 transient transient ADJ JJ Degree=Pos _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 data data NOUN NN Number=Sing _ _ _ _ 5 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 dopamine dopamine PRON PRP _ _ _ _ _ 8 stimulated stimulate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 through through ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 15 element element NOUN NN Number=Sing _ _ _ _ 16 present present VERB VB VerbForm=Inf _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 long long ADJ JJ Degree=Pos _ _ _ _ 20 terminal terminal NOUN NN Number=Sing _ _ _ _ 21 repeat repeat NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 4996 # text = The importance of NF-kappaB sites was confirmed by using vectors containing wild-type or mutant kappaB sites in a heterologous promoter. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 importance importance NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 sites site NOUN NNS Number=Plur _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 confirmed confirm VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by SCONJ IN _ _ _ _ _ 11 using use VERB VBG VerbForm=Ger _ _ _ _ 12 vectors vector NOUN NNS Number=Plur _ _ _ _ 13 containing contain VERB VBG VerbForm=Ger _ _ _ _ 14 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 type type NOUN NN Number=Sing _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 20 sites site NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 24 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 4997 # text = Consistent with the role of NF-kappaB in mediating dopamine responsiveness, the proteasome inhibitor MG132 abolished dopamine-induced transcriptional activation. 1 Consistent consistent ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 in in SCONJ IN _ _ _ _ _ 10 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 11 dopamine dopamine NOUN NN Number=Sing _ _ _ _ 12 responsiveness responsiveness NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 proteasome proteasome ADJ JJ Degree=Pos _ _ _ _ 16 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 17 MG132 Mg132 PART TO Abbr=Yes _ _ _ _ 18 abolished abolish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 dopamine dopamine NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 4998 # text = We further explored the effect of dopamine in the presence of phorbol esters or tumor necrosis factor-alpha (TNF-alpha) known to activate NF-kappaB. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 explored explore VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 dopamine dopamine NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 presence presence NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 13 esters ester NOUN NNS Number=Plur _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 tumor tumor NOUN NN Number=Sing _ _ _ _ 16 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 -alpha -alpha NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 activate activate ADJ JJ Degree=Pos _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 4999 # text = The combination of dopamine and TNF-alpha led to a stimulation of HIV-1 transcription and replication. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 combination combination NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 dopamine dopamine NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 alpha alpha NOUN NN Number=Sing _ _ _ _ 9 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 5000 # text = However, in contrast with TNF-alpha, dopamine treatment did not affect NF-kappaB DNA binding activity nor the concentrations of p50, p65 and IkappaB-alpha proteins, which suggests a distinct NF-kappaB activation mechanism. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 contrast contrast NOUN NN Number=Sing _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 dopamine dopamine NOUN NN Number=Sing _ _ _ _ 11 treatment treatment NOUN NN Number=Sing _ _ _ _ 12 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 affect affect VERB VB VerbForm=Inf _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 18 DNA dna NOUN NN Number=Sing _ _ _ _ 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 nor nor CCONJ CC _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 p65 p65 NUM CD NumType=Card _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 IkappaB Ikappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 alpha alpha NOUN NN Number=Sing _ _ _ _ 32 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 which which PRON WDT PronType=Rel _ _ _ _ 35 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 38 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 41 activation activation NOUN NN Number=Sing _ _ _ _ 42 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 5001 # text = These results reveal a new link between the dopamine system, cytokine signaling pathway and regulation of gene expression via the involvement of NF-kappaB in T cells and PBMC. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 reveal reveal VERB VB VerbForm=Inf _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 new new ADJ JJ Degree=Pos _ _ _ _ 6 link link NOUN NN Number=Sing _ _ _ _ 7 between between ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 dopamine dopamine NOUN NN Number=Sing _ _ _ _ 10 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 13 signaling signal NOUN NN Number=Sing _ _ _ _ 14 pathway pathway NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 regulation regulation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 via via ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 involvement involvement NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 T T PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 PBMC PBMC NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5002 # text = Document 003001178 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001178 003001178 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5003 # text = Association of alterations in NF-kappa B moieties with HIV type 1 proviral latency in certain monocytic cells. 1 Association Association NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 alterations alteration NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 moieties moiety NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 HIV HIV PROPN NNP Number=Sing _ _ _ _ 12 type type NOUN NN Number=Sing _ _ _ _ 13 1 1 NUM CD NumType=Card _ _ _ _ 14 proviral proviral ADJ JJ Degree=Pos _ _ _ _ 15 latency latency NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 certain certain ADJ JJ Degree=Pos _ _ _ _ 18 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5004 # text = Human immunodeficiency virus type 1 (HIV-1) replication is controlled by a complex array of virally encoded and cellular proteins. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 3 virus virus NOUN NN Number=Sing _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ _ 5 1 1 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 replication replication NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 complex complex ADJ JJ Degree=Pos _ _ _ _ 17 array array NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 virally virally ADV RB _ _ _ _ _ 20 encoded encod ADJ JJ Degree=Pos _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 23 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5005 # text = A wide spectrum of levels of HIV-1 expression have been demonstrated in various cells, both in cell culture and in vivo. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 wide wide ADJ JJ Degree=Pos _ _ _ _ 3 spectrum spectrum NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 levels level NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 13 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 various various ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 both both CCONJ CC _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 culture culture NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5006 # text = Molecular mechanisms leading to restricted HIV-1 replication may differ between certain cell types. 1 Molecular Molecular ADJ JJ Degree=Pos _ _ _ _ 2 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 3 leading lead VERB VBG VerbForm=Ger _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 replication replication NOUN NN Number=Sing _ _ _ _ 10 may may AUX MD VerbForm=Fin _ _ _ _ 11 differ differ VERB VB VerbForm=Inf _ _ _ _ 12 between between ADP IN _ _ _ _ _ 13 certain certain ADJ JJ Degree=Pos _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 5007 # text = It is now demonstrated that HIV-1 proviral latency in the monocytic cell line U1, in which only extremely low levels of HIV-1 expression are detected in the baseline unstimulated state, is associated with alterations in nuclear factor-kappa B (NF-kappa B) moieties demonstrated in these cells by electrophoretic mobility shift assays (EMSAs) and in situ UV cross-linking studies. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 now now ADV RB _ _ _ _ _ 4 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 proviral proviral ADJ JJ Degree=Pos _ _ _ _ 10 latency latency NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 line line NOUN NN Number=Sing _ _ _ _ 16 U1 U1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 only only ADV RB _ _ _ _ _ 21 extremely extremely ADV RB _ _ _ _ _ 22 low low ADJ JJ Degree=Pos _ _ _ _ 23 levels level NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 baseline baseline NOUN NN Number=Sing _ _ _ _ 34 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 35 state state NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 with with ADP IN _ _ _ _ _ 40 alterations alteration NOUN NNS Number=Plur _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 43 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 kappa kappa NOUN NN Number=Sing _ _ _ _ 46 B b NOUN NN Number=Sing _ _ _ _ 47 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 48 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 kappa kappa NOUN NN Number=Sing _ _ _ _ 51 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 ) ) PUNCT -RRB- _ _ _ _ _ 53 moieties moiety NOUN NNS Number=Plur _ _ _ _ 54 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 55 in in ADP IN _ _ _ _ _ 56 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 57 cells cell NOUN NNS Number=Plur _ _ _ _ 58 by by ADP IN _ _ _ _ _ 59 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 60 mobility mobility NOUN NN Number=Sing _ _ _ _ 61 shift shift NOUN NN Number=Sing _ _ _ _ 62 assays assay NOUN NNS Number=Plur _ _ _ _ 63 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 64 EMSAs EMSAs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 65 ) ) PUNCT -RRB- _ _ _ _ _ 66 and and CCONJ CC _ _ _ _ _ 67 in in ADP IN _ _ _ _ _ 68 situ situ NOUN NN Number=Sing _ _ _ _ 69 UV UV NOUN NN Number=Sing _ _ _ _ 70 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 71 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 72 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 73 . . PUNCT . _ _ _ _ _ # sent_id = 5008 # text = A predominance of p50 NF-kappa B moieties and possibly p50 homodimers or closely related species, rather than the p50-p56 heterodimer of NF-kappa B that is the predominant NF-kappa B species in most T lymphocytic and monocytic cells, is demonstrated in the nuclei of U1 cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 predominance predominance NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p50 p50 NUM CD NumType=Card _ _ _ _ 5 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 moieties moiety NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 possibly possibly ADV RB _ _ _ _ _ 12 p50 p50 NUM CD NumType=Card _ _ _ _ 13 homodimers homodimer NOUN NNS Number=Plur _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 closely closely ADV RB _ _ _ _ _ 16 related related ADJ JJ Degree=Pos _ _ _ _ 17 species species NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 rather rather ADV RB _ _ _ _ _ 20 than than ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 p56 p56 NOUN NN Number=Sing _ _ _ _ 25 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ _ 31 that that PRON WDT PronType=Rel _ _ _ _ 32 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 predominant predominant ADJ JJ Degree=Pos _ _ _ _ 35 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 kappa kappa NOUN NN Number=Sing _ _ _ _ 38 B b NOUN NN Number=Sing _ _ _ _ 39 species species NOUN NNS Number=Plur _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 most most ADJ JJS Degree=Sup _ _ _ _ 42 T T PROPN NNP Number=Sing _ _ _ _ 43 lymphocytic lymphocytic ADJ JJ Degree=Pos _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 46 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 49 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 in in ADP IN _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 53 of of ADP IN _ _ _ _ _ 54 U1 U1 PROPN NNP Number=Sing _ _ _ _ 55 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 5009 # text = This pattern of NF-kappa B-related moieties differs from the latently infected T lymphocytic cell line ACH-2, and from the U937 monocytic line, the parental cell line of the U1 cellular clone. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 pattern pattern NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B- B- SYM NFP _ _ _ _ SpaceAfter=No 8 related related ADJ JJ Degree=Pos _ _ _ _ 9 moieties moiety NOUN NNS Number=Plur _ _ _ _ 10 differs differ NOUN NNS Number=Plur _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 latently latently ADV RB Degree=Pos _ _ _ _ 14 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 lymphocytic lymphocytic ADJ JJ Degree=Pos _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 line line NOUN NN Number=Sing _ _ _ _ 19 ACH ACh NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 U937 U937 NUM CD NumType=Card _ _ _ _ 27 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 28 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 parental parental ADJ JJ Degree=Pos _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 line line NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 U1 U1 PROPN NNP Number=Sing _ _ _ _ 37 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 38 clone clone NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 5010 # text = As such, these data suggest that different proximal mechanisms may lead to restricted HIV-1 replication in various cell types. 1 As as ADP IN _ _ _ _ _ 2 such such ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 data data NOUN NN Number=Sing _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 different different ADJ JJ Degree=Pos _ _ _ _ 9 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 10 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 11 may may AUX MD VerbForm=Fin _ _ _ _ 12 lead lead VERB VB VerbForm=Inf _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 replication replication NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 various various ADJ JJ Degree=Pos _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5011 # text = Document 003001180 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001180 003001180 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5012 # text = Differential induction of DNA-binding activities following CD19 cross-linking in human B lineage cells. 1 Differential differential ADJ JJ Degree=Pos _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 binding binding VERB VBG VerbForm=Ger _ _ _ _ 7 activities activity NOUN NNS Number=Plur _ _ _ _ 8 following follow VERB VBG VerbForm=Ger _ _ _ _ 9 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 19 19 NUM CD NumType=Card _ _ _ _ 11 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 lineage lineage NOUN NN Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5013 # text = The B cell-specific cell surface molecule CD19 is expressed at all stages of B cell development, including normal plasma cells, and mediates signal transduction via interaction with cytoplasmic effector proteins. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 B B NOUN NN Number=Sing _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 surface surface NOUN NN Number=Sing _ _ _ _ 8 molecule molecule NOUN NN Number=Sing _ _ _ _ 9 CD19 CD19 NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 at at ADP IN _ _ _ _ _ 13 all all DET DT _ _ _ _ _ 14 stages stage NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 B b ADJ JJ Degree=Pos _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 including include VERB VBG VerbForm=Ger _ _ _ _ 21 normal normal ADJ JJ Degree=Pos _ _ _ _ 22 plasma plasma NOUN NN Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 signal signal ADJ JJ Degree=Pos _ _ _ _ 28 transduction transduction NOUN NN Number=Sing _ _ _ _ 29 via via ADP IN _ _ _ _ _ 30 interaction interaction NOUN NN Number=Sing _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 33 effector effector NOUN NN Number=Sing _ _ _ _ 34 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 5014 # text = Cross-linking CD19 on early human B lineage cells induces the formation of a CD19/Vav/phosphatidylinositol-3 1 Cross cross PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 linking link VERB VBG VerbForm=Ger _ _ _ _ 4 CD19 Cd19 NOUN NN Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 early early ADJ JJ Degree=Pos _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 lineage lineage NOUN NN Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 formation formation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 CD19/ Cd19/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 Vav/phosphatidylinositol Vav/phosphatidylinositol PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 -3 -3 NUM CD NumType=Card _ _ _ _ # sent_id = 5015 # text = kinase complex, tyrosine phosphorylation of CD19 and Vav, and activation of the Ras pathway. 1 kinase kinase NOUN NN Number=Sing _ _ _ _ 2 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 5 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 CD19 CD19 PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 Vav Vav PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 Ras Ras PROPN NNP Number=Sing _ _ _ _ 16 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 5016 # text = To further explore the ramifications of CD19 signaling, the current study examined whether phosphorylation of Elk-1, activation of activator protein-1 (AP-1), or activation of nuclear factor-kappaB (NF-kappaB) transcription factors occurred following CD19 cross-linking. 1 To to PART TO _ _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 explore explore VERB VB VerbForm=Inf _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 ramifications ramification NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 19 19 NUM CD NumType=Card _ _ _ _ 9 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 current current ADJ JJ Degree=Pos _ _ _ _ 13 study study NOUN NN Number=Sing _ _ _ _ 14 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 whether whether SCONJ IN _ _ _ _ _ 16 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 Elk elk PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 activator activator NOUN NN Number=Sing _ _ _ _ 24 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 or or CCONJ CC _ _ _ _ _ 34 activation activation NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 37 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 -kappaB -kappaB PROPN NNP Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ _ 44 transcription transcription NOUN NN Number=Sing _ _ _ _ 45 factors factor NOUN NNS Number=Plur _ _ _ _ 46 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 47 following follow VERB VBG VerbForm=Ger _ _ _ _ 48 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 19 19 NUM CD NumType=Card _ _ _ _ 50 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 -linking -link VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 5017 # text = The cells used were the BLIN-1 pre-B cell line expressing low levels of cell surface mu heavy chain associated with surrogate light chain and the 1E8 immature B cell line expressing cell surface mu/kappa. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 BLIN BLIN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 pre pre X AFX _ _ _ _ SpaceAfter=No 10 -B -b ADJ JJ Degree=Pos _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 line line NOUN NN Number=Sing _ _ _ _ 13 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 14 low low ADJ JJ Degree=Pos _ _ _ _ 15 levels level NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 surface surface NOUN NN Number=Sing _ _ _ _ 19 mu mu NOUN NN Number=Sing _ _ _ _ 20 heavy heavy ADJ JJ Degree=Pos _ _ _ _ 21 chain chain NOUN NN Number=Sing _ _ _ _ 22 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 surrogate surrogate NOUN NN Number=Sing _ _ _ _ 25 light light NOUN NN Number=Sing _ _ _ _ 26 chain chain NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 1E8 1E8 NUM CD NumType=Card _ _ _ _ 30 immature immature NOUN NN Number=Sing _ _ _ _ 31 B b NOUN NN Number=Sing _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 line line NOUN NN Number=Sing _ _ _ _ 34 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ _ 36 surface surface NOUN NN Number=Sing _ _ _ _ 37 mu/ muith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 38 kappa kappa NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 5018 # text = Lysates from CD19 cross-linked 1E8 cells induced robust phosphorylation of an Elk-1 fusion protein in vitro, whereas no phosphorylation of Elk-1 fusion protein occurred using lysates from CD19 cross-linked BLIN-1 cells. 1 Lysates Lysate NOUN NNS Number=Plur _ _ _ _ 2 from from ADP IN _ _ _ _ _ 3 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 19 19 NUM CD NumType=Card _ _ _ _ 5 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 -linked -link VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 1E8 1E8 NUM CD NumType=Card _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 robust robust ADJ JJ Degree=Pos _ _ _ _ 11 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 Elk elk PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 fusion fusion NOUN NN Number=Sing _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 whereas whereas SCONJ IN _ _ _ _ _ 23 no no DET DT _ _ _ _ _ 24 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 Elk elk PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 fusion fusion NOUN NN Number=Sing _ _ _ _ 30 protein protein NOUN NN Number=Sing _ _ _ _ 31 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 using use VERB VBG VerbForm=Ger _ _ _ _ 33 lysates lysate NOUN NNS Number=Plur _ _ _ _ 34 from from ADP IN _ _ _ _ _ 35 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 19 19 NUM CD NumType=Card _ _ _ _ 37 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 BLIN Blin NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 1 1 NUM CD NumType=Card _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 5019 # text = An electrophoretic mobility shift assay employing AP-1 and NF-kappaB consensus oligonucleotides was used to demonstrate that AP-1 -binding activity increased, while constitutive NF-kappaB-binding activity was not enhanced, following 2 h of CD19 cross-linking in 1E8 cells. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 3 mobility mobility NOUN NN Number=Sing _ _ _ _ 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assay assay NOUN NN Number=Sing _ _ _ _ 6 employing employ VERB VBG VerbForm=Ger _ _ _ _ 7 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 14 consensus consensus NOUN NN Number=Sing _ _ _ _ 15 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 demonstrate demonstrate VERB VB VerbForm=Inf _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 binding bind VERB VBG VerbForm=Ger _ _ _ _ 26 activity activity NOUN NN Number=Sing _ _ _ _ 27 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 while while SCONJ IN _ _ _ _ _ 30 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 31 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 kappaB- kappab- PUNCT , _ _ _ _ SpaceAfter=No 34 binding binding VERB VBG VerbForm=Ger _ _ _ _ 35 activity activity NOUN NN Number=Sing _ _ _ _ 36 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 37 not not PART RB _ _ _ _ _ 38 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 following follow VERB VBG VerbForm=Ger _ _ _ _ 41 2 2 NUM CD NumType=Card _ _ _ _ 42 h h NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 19 19 NUM CD NumType=Card _ _ _ _ 46 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 1E8 1E8 NUM CD NumType=Card _ _ _ _ 50 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 5020 # text = Supershift experiments revealed that JunD and c-Fos proteins mediated anti-CD19 induced AP-1-binding activity in 1E8 cells. 1 Supershift Supershift PROPN NNP Number=Sing _ _ _ _ 2 experiments experiment NOUN NNS Number=Plur _ _ _ _ 3 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 JunD JunD PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Fos Fos NOUN NNS Number=Plur _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ _ 11 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 anti-CD19 anti-CD19 NUM CD NumType=Card _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 binding binding VERB VBG VerbForm=Ger _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 1E8 1E8 NUM CD NumType=Card _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 5021 # text = In contrast, CD19 cross-linking in BLIN-1 cells resulted in the induction of NF-kappaB, but had no apparent effect on AP-1-binding activity. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 19 19 NUM CD NumType=Card _ _ _ _ 6 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 BLIN BLIN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 no no DET DT _ _ _ _ _ 25 apparent apparent ADJ JJ Degree=Pos _ _ _ _ 26 effect effect NOUN NN Number=Sing _ _ _ _ 27 on on ADP IN _ _ _ _ _ 28 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 binding binding VERB VBG VerbForm=Ger _ _ _ _ 33 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 5022 # text = These data suggest that CD19-mediated signal transduction activates different transcription factors at juxtaposed stages of B cell development that may culminate in the activation or suppression of distinct sets of genes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 CD19 CD19 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 -mediated -mediated VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 signal signal ADJ JJ Degree=Pos _ _ _ _ 8 transduction transduction NOUN NN Number=Sing _ _ _ _ 9 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 different different ADJ JJ Degree=Pos _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 at at ADP IN _ _ _ _ _ 14 juxtaposed juxtapose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 stages stage NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 B b ADJ JJ Degree=Pos _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 development development NOUN NN Number=Sing _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 may may AUX MD VerbForm=Fin _ _ _ _ 22 culminate culminate VERB VB VerbForm=Inf _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 suppression suppression NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 30 sets set NOUN NNS Number=Plur _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5023 # text = Document 003001182 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001182 003001182 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5024 # text = [Regulation of transcription of the interleukin-2 gene in B-lymphocytes] 1 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 Regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 B B ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 5025 # text = Since most B cell clones immortalized with EBV virus can be induced to produce interleukin-2, a typical T cell cytokine, we studied the role of different elements of the IL-2 promoter in such clones by transfection. 1 Since since ADP IN _ _ _ _ _ 2 most most ADJ JJS Degree=Sup _ _ _ _ 3 B b ADJ JJ Degree=Pos _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 clones clone NOUN NNS Number=Plur _ _ _ _ 6 immortalized immortalize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 EBV EBV NOUN NN Number=Sing _ _ _ _ 9 virus virus NOUN NN Number=Sing _ _ _ _ 10 can can AUX MD VerbForm=Fin _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 produce produce VERB VB VerbForm=Inf _ _ _ _ 15 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 typical typical ADJ JJ Degree=Pos _ _ _ _ 21 T t NOUN NN Number=Sing _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 26 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 role role NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 different different ADJ JJ Degree=Pos _ _ _ _ 31 elements element NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 2 2 NUM CD NumType=Card _ _ _ _ 37 promoter promoter NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 such such ADJ JJ Degree=Pos _ _ _ _ 40 clones clone NOUN NNS Number=Plur _ _ _ _ 41 by by ADP IN _ _ _ _ _ 42 transfection transfection NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 5026 # text = It was found, in particular, that the element TCEd, which binds the transcription factor NF-kB, is very active in all three B clones tested. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 particular particular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 element element NOUN NN Number=Sing _ _ _ _ 11 TCEd TCEd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kB kb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 very very ADV RB _ _ _ _ _ 24 active active ADJ JJ Degree=Pos _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 all all DET DT _ _ _ _ _ 27 three three NUM CD NumType=Card _ _ _ _ 28 B b ADJ JJ Degree=Pos _ _ _ _ 29 clones clone NOUN NNS Number=Plur _ _ _ _ 30 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 5027 # text = This element has no activity in T cells of the Jurkat line. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 element element NOUN NN Number=Sing _ _ _ _ 3 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 no no DET DT _ _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 12 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 5028 # text = The NFATd element, which binds the transcription factor NFAT-1 and is very active in T cells, is only weakly active in one B clone and not at all in another. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 NFATd Nfatd PROPN NNP Number=Sing _ _ _ _ 3 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 which which PRON WDT PronType=Rel _ _ _ _ 6 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 very very ADV RB _ _ _ _ _ 16 active active ADJ JJ Degree=Pos _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 only only ADV RB _ _ _ _ _ 23 weakly weakly ADV RB _ _ _ _ _ 24 active active ADJ JJ Degree=Pos _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 one one NUM CD NumType=Card _ _ _ _ 27 B b ADJ JJ Degree=Pos _ _ _ _ 28 clone clone NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 not not PART RB _ _ _ _ _ 31 at at ADV RB _ _ _ _ _ 32 all all ADV RB _ _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 another another DET DT _ _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 5029 # text = Different elements thus contribute to IL-2 promoter activity in different cells. 1 Different different ADJ JJ Degree=Pos _ _ _ _ 2 elements element NOUN NNS Number=Plur _ _ _ _ 3 thus thus ADV RB _ _ _ _ _ 4 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 different different ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5030 # text = Document 003001183 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001183 003001183 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5031 # text = Altered DNA-binding specificity mutants of EKLF and Sp1 show that EKLF is an activator of the beta-globin locus control region in vivo. 1 Altered alter VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 specificity specificity NOUN NN Number=Sing _ _ _ _ 6 mutants mutant NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 EKLF EKLF PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 11 show show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 EKLF EKLF PROPN NNP Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 activator activator NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 globin globin NOUN NN Number=Sing _ _ _ _ 22 locus locus NOUN NN Number=Sing _ _ _ _ 23 control control NOUN NN Number=Sing _ _ _ _ 24 region region NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5032 # text = The locus control region of the beta-globin cluster contains five DNase I hypersensitive sites (5'HS1-5) required for locus activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 locus locus ADJ JJ Degree=Pos _ _ _ _ 3 control control NOUN NN Number=Sing _ _ _ _ 4 region region NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 globin globin NOUN NN Number=Sing _ _ _ _ 10 cluster cluster NOUN NN Number=Sing _ _ _ _ 11 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 five five NUM CD NumType=Card _ _ _ _ 13 DNase DNase NOUN NN Number=Sing _ _ _ _ 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 15 hypersensitive hypersensitive VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 sites site NOUN NNS Number=Plur _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 'HS ' NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - SYM SYM _ _ _ _ SpaceAfter=No 22 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 locus locus ADJ JJ Degree=Pos _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5033 # text = 5'HS3 contains six G-rich motifs that are essential for its activity. 1 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 'HS3 'HS3 NUM CD NumType=Card _ _ _ _ 3 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 six six NUM CD NumType=Card _ _ _ _ 5 G- g- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 rich rich ADJ JJ Degree=Pos _ _ _ _ 7 motifs motif NOUN NNS Number=Plur _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 essential essential ADJ JJ Degree=Pos _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 5034 # text = Members of a protein family, characterized by three zinc fingers highly homologous to those found in transcription factor Sp1, interact with these motifs. 1 Members member NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 three three NUM CD NumType=Card _ _ _ _ 10 zinc zinc NOUN NN Number=Sing _ _ _ _ 11 fingers finger NOUN NNS Number=Plur _ _ _ _ 12 highly highly ADV RB _ _ _ _ _ 13 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 16 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 Sp1 sp1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 interact interact VERB VB VerbForm=Inf _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 25 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5035 # text = Because point mutagenesis cannot distinguish between family members, it is not known which protein activates 5'HS3. 1 Because because SCONJ IN _ _ _ _ _ 2 point point NOUN NN Number=Sing _ _ _ _ 3 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ _ 4 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 5 not not PART RB _ _ _ _ _ 6 distinguish distinguish VERB VB VerbForm=Inf _ _ _ _ 7 between between ADP IN _ _ _ _ _ 8 family family NOUN NN Number=Sing _ _ _ _ 9 members member NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 known known VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 which which DET WDT PronType=Int _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 20 HS3 HS3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5036 # text = We show that the function of such closely related proteins can be distinguished in vivo by matching point mutations in 5'HS3 with amino acid changes in the zinc fingers of Sp1 and EKLF. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 function function NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 such such ADJ JJ Degree=Pos _ _ _ _ 8 closely closely ADV RB _ _ _ _ _ 9 related relate ADJ JJ Degree=Pos _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ _ 11 can can AUX MD VerbForm=Fin _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 distinguished distinguish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 vivo vivo NOUN NN Number=Sing _ _ _ _ 16 by by SCONJ IN _ _ _ _ _ 17 matching match VERB VBG VerbForm=Ger _ _ _ _ 18 point point NOUN NN Number=Sing _ _ _ _ 19 mutations mutation NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ' 's PUNCT `` _ _ _ _ SpaceAfter=No 23 HS3 HS3 NOUN NN Number=Sing _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 amino amino DET DT _ _ _ _ _ 26 acid acid ADJ JJ Degree=Pos _ _ _ _ 27 changes change NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 zinc zinc NOUN NN Number=Sing _ _ _ _ 31 fingers finger NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 EKLF EKLF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 5037 # text = Testing their activity in transgenic mice shows that EKLF is a direct activator of 5'HS3. 1 Testing testing VERB VBG VerbForm=Ger _ _ _ _ 2 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 3 activity activity NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 6 mice mouse NOUN NNS Number=Plur _ _ _ _ 7 shows show VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 EKLF EKLF PROPN NNP Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 direct direct ADJ JJ Degree=Pos _ _ _ _ 13 activator activator NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 'HS3 'HS3 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5038 # text = Document 003001190 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001190 003001190 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5039 # text = Stimulation of the human immunodeficiency virus type 2 (HIV-2) gene expression by the cytomegalovirus and HIV-2 transactivator gene. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 type type NOUN NN Number=Sing _ _ _ _ 8 2 2 NUM CD NumType=Card _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 cytomegalovirus cytomegalovirus NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5040 # text = Human immunodeficiency virus (HIV) often causes latent infection. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 3 virus virus NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 often often ADV RB _ _ _ _ _ 8 causes cause VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 latent latent ADJ JJ Degree=Pos _ _ _ _ 10 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 5041 # text = Transactivation by some DNA viruses has been implicated in inducing HIV-1 replication and pathogenesis. 1 Transactivation Transactivation NOUN NN Number=Sing _ _ _ _ 2 by by ADP IN _ _ _ _ _ 3 some some DET DT _ _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ _ 5 viruses viruse NOUN NNS Number=Plur _ _ _ _ 6 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 11 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 replication replication NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 5042 # text = The transactivator (IE-2) gene of the human cytomegalovirus (CMV) can enhance HIV-2 as well as HIV-1 gene expression in vitro. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 IE ie NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 cytomegalovirus cytomegalovirus NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 CMV CMV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 can can AUX MD VerbForm=Fin _ _ _ _ 17 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 18 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - SYM SYM _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 as as ADV RB _ _ _ _ _ 22 well well ADV RB Degree=Pos _ _ _ _ 23 as as ADP IN _ _ _ _ _ 24 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 5043 # text = This inducer can act in concert with the HIV-2 tat gene and T-cell activation in enhancing gene expression in human CD4+ lymphocytes. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 inducer inducer NOUN NN Number=Sing _ _ _ _ 3 can can AUX MD VerbForm=Fin _ _ _ _ 4 act act VERB VB VerbForm=Inf _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 concert concert NOUN NN Number=Sing _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 tat tat NOUN NN Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 in in SCONJ IN _ _ _ _ _ 19 enhancing enhance VERB VBG VerbForm=Ger _ _ _ _ 20 gene gene ADJ JJ Degree=Pos _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 CD4 CD4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 + + SYM SYM _ _ _ _ _ 26 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5044 # text = While the HIV-2 and HIV-1 tat genes and T-cell activators apparently employ independent modes of action, the CMV transactivator in combination with the HIV-2 tat or T-cell activators may employ a gene activation pathway with some common and some distinct components. 1 While while SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 tat tat NOUN NN Number=Sing _ _ _ _ 11 genes gene NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 activators activator NOUN NNS Number=Plur _ _ _ _ 16 apparently apparently ADV RB _ _ _ _ _ 17 employ employ VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 independent independent ADJ JJ Degree=Pos _ _ _ _ 19 modes mode NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 action action NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 CMV Cmv PROPN NNP Number=Sing _ _ _ _ 25 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 combination combination NOUN NN Number=Sing _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 2 2 NUM CD NumType=Card _ _ _ _ 33 tat tat NOUN NN Number=Sing _ _ _ _ 34 or or CCONJ CC _ _ _ _ _ 35 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 cell cell NOUN NN Number=Sing _ _ _ _ 37 activators activator NOUN NNS Number=Plur _ _ _ _ 38 may may AUX MD VerbForm=Fin _ _ _ _ 39 employ employ VERB VB VerbForm=Inf _ _ _ _ 40 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 41 gene gene NOUN NN Number=Sing _ _ _ _ 42 activation activation NOUN NN Number=Sing _ _ _ _ 43 pathway pathway NOUN NN Number=Sing _ _ _ _ 44 with with ADP IN _ _ _ _ _ 45 some some DET DT _ _ _ _ _ 46 common common ADJ JJ Degree=Pos _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 some some DET DT _ _ _ _ _ 49 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 50 components component NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 5045 # text = Both HIV-2 and CMV transactivators enhance HIV-2 gene expression by transcriptional activation involving transcript initiation as well as elongation, with CMV transactivator affecting elongation more than the initiation. 1 Both both DET DT _ _ _ _ _ 2 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 CMV Cmv NOUN NN Number=Sing _ _ _ _ 7 transactivators transactivator NOUN NNS Number=Plur _ _ _ _ 8 enhance enhance VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 involving involve VERB VBG VerbForm=Ger _ _ _ _ 18 transcript transcript ADJ JJ Degree=Pos _ _ _ _ 19 initiation initiation NOUN NN Number=Sing _ _ _ _ 20 as as ADV RB _ _ _ _ _ 21 well well ADV RB Degree=Pos _ _ _ _ 22 as as ADP IN _ _ _ _ _ 23 elongation elongation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 CMV Cmv NOUN NN Number=Sing _ _ _ _ 27 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 28 affecting affect VERB VBG VerbForm=Ger _ _ _ _ 29 elongation elongation NOUN NN Number=Sing|Typo=Yes _ _ _ _ 30 more more ADJ JJR Degree=Cmp _ _ _ _ 31 than than ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 initiation initiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 5046 # text = A significant proportion of transcripts appear to terminate prematurely in the absence of transactivators. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 significant significant ADJ JJ Degree=Pos _ _ _ _ 3 proportion proportion NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 6 appear appear VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 terminate terminate VERB VB VerbForm=Inf _ _ _ _ 9 prematurely prematurely ADV RB _ _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 absence absence NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 transactivators transactivator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 5047 # text = Deletion mutation analysis of the HIV-2 long terminal repeat (LTR) suggests that the element that responds to CMV transactivation in human CD4+ lymphocytes is either a diffuse one or located downstream of the HIV-2 enhancer element. 1 Deletion Deletion NOUN NN Number=Sing _ _ _ _ 2 mutation mutation NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 long long ADJ JJ Degree=Pos _ _ _ _ 10 terminal terminal NOUN NN Number=Sing _ _ _ _ 11 repeat repeat NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 element element NOUN NN Number=Sing _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 responds respond VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 CMV CMV PROPN NNP Number=Sing _ _ _ _ 23 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 CD4 CD4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 + + SYM SYM _ _ _ _ _ 28 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 either either CCONJ CC _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 diffuse diffuse NOUN NN Number=Sing _ _ _ _ 33 one one NUM CD NumType=Card _ _ _ _ 34 or or CCONJ CC _ _ _ _ _ 35 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 downstream downstream NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 HIV Hiv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 2 2 NUM CD NumType=Card _ _ _ _ 42 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 43 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5048 # text = Document 003001192 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001192 003001192 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5049 # text = Tissue-specific expression of the platelet GPIIb gene. 1 Tissue Tissue ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 specific specific ADJ JJ Degree=Pos _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 platelet platelet NOUN NN Number=Sing _ _ _ _ 8 GPIIb GPIIb PROPN NNP Number=Sing _ _ _ _ 9 gene gene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5050 # text = One of the major objectives in the study of thrombogenesis is to determine the mechanisms by which a hematopoietic progenitor is activated and committed to the megakaryocytic lineage. 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 major major ADJ JJ Degree=Pos _ _ _ _ 5 objectives objective NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 study study NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 thrombogenesis thrombogenesis PRON DT Number=Sing|PronType=Dem _ _ _ _ 11 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 determine determine VERB VB VerbForm=Inf _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 which which DET WDT PronType=Int _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 20 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 activated activated VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 committed committed VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 28 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5051 # text = Recent development of primary cultures of human megakaryocytes and the molecular cloning of genes that are specific to this lineage offer the possibility of getting some insights into the genetic mechanisms that control megakaryocytopoiesis. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 development development NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 primary primary ADJ JJ Degree=Pos _ _ _ _ 5 cultures culture NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 megakaryocytes megakaryocyte NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 12 cloning cloning NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 genes gene NOUN NNS Number=Plur _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 20 lineage lineage NOUN NN Number=Sing _ _ _ _ 21 offer offer VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 possibility possibility NOUN NN Number=Sing _ _ _ _ 24 of of SCONJ IN _ _ _ _ _ 25 getting get VERB VBG VerbForm=Ger _ _ _ _ 26 some some DET DT _ _ _ _ _ 27 insights insight NOUN NNS Number=Plur _ _ _ _ 28 into into ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 31 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 32 that that PRON WDT PronType=Rel _ _ _ _ 33 control control VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 megakaryocytopoiesis megakaryocytopoiesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 5052 # text = One gene of interest is the glycoprotein IIb (GPIIb) gene; GPIIb, the alpha subunit of the platelet cytoadhesin GPIIb-IIIa, is produced in megakaryocytes at an early stage of the differentiation, whereas the other subunit of this complex, GPIIIa, is expressed in other cells. 1 One one NUM CD NumType=Card _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 interest interest NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 glycoprotein glycoprotein NOUN NN Number=Sing _ _ _ _ 8 IIb IIb PROPN NNP Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 GPIIb GPIIb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ; ; PUNCT , _ _ _ _ _ 14 GPIIb GPIIb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 alpha alpha NOUN NN Number=Sing _ _ _ _ 18 subunit subunit NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 platelet platelet NOUN NN Number=Sing _ _ _ _ 22 cytoadhesin cytoadhesin ADP IN _ _ _ _ _ 23 GPIIb GPIIb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 IIIa IIIa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 produced produce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 megakaryocytes megakaryocyte NOUN NNS Number=Plur _ _ _ _ 31 at at ADP IN _ _ _ _ _ 32 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 early early ADJ JJ Degree=Pos _ _ _ _ 34 stage stage NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 whereas whereas SCONJ IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 other other ADJ JJ Degree=Pos _ _ _ _ 42 subunit subunit NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 45 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 GPIIIa GPIIIa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 50 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 51 in in ADP IN _ _ _ _ _ 52 other other ADJ JJ Degree=Pos _ _ _ _ 53 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 5053 # text = For these reasons, the 5'-flanking region of the GPIIb gene was used to identify the regions that interact with DNA-binding nuclear factors. 1 For for ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 reasons reason NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 10 region region NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 GPIIb GPIIb PROPN NNP Number=Sing _ _ _ _ 14 gene gene PROPN NNP Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 identify identify VERB VB VerbForm=Inf _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 regions region NOUN NNS Number=Plur _ _ _ _ 21 that that PRON WDT PronType=Rel _ _ _ _ 22 interact interact VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 binding bind VERB VBG VerbForm=Ger _ _ _ _ 27 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 28 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5054 # text = A fragment extending from -643 to +33 is capable of controlling the tissue-specific expression of the CAT gene in transfection experiments. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 fragment fragment NOUN NN Number=Sing _ _ _ _ 3 extending extend VERB VBG VerbForm=Ger _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 643 643 NUM CD NumType=Card _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 +33 +33 NUM CD NumType=Card _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 capable capable ADJ JJ Degree=Pos _ _ _ _ 11 of of SCONJ IN _ _ _ _ _ 12 controlling controlle VERB VBG VerbForm=Ger _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 CAT cat PROPN NNP Number=Sing _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 transfection transfection NOUN NN Number=Sing _ _ _ _ 24 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5055 # text = Within this region, we have identified several sequences that are implicated in DNA protein interactions as shown in DNAse I footprints and gel mobility shift assays. 1 Within within ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 several several ADJ JJ Degree=Pos _ _ _ _ 9 sequences sequence NOUN NNS Number=Plur _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 implicated implicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 DNA dna NOUN NN Number=Sing _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 interactions interaction NOUN NNS Number=Plur _ _ _ _ 17 as as SCONJ IN _ _ _ _ _ 18 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 DNAse DNAse NOUN NN Number=Sing _ _ _ _ 21 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 22 footprints footprint NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 gel gel NOUN NN Number=Sing _ _ _ _ 25 mobility mobility NOUN NN Number=Sing _ _ _ _ 26 shift shift NOUN NN Number=Sing _ _ _ _ 27 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5056 # text = One region, centered at -54, is similar to a nuclear factor E1-binding site, and a region located at position -233 contains a CCAAT motif. 1 One one NUM CD NumType=Card _ _ _ _ 2 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 centered center VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 at at ADP IN _ _ _ _ _ 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 54 54 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 similar similar ADJ JJ Degree=Pos _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 E1 e1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 region region NOUN NN Number=Sing _ _ _ _ 23 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 at at ADP IN _ _ _ _ _ 25 position position NOUN NN Number=Sing _ _ _ _ 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 233 233 NUM CD NumType=Card _ _ _ _ 28 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 CCAAT Ccaat NOUN NN Number=Sing _ _ _ _ 31 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 5057 # text = Two domains centered at positions -345 and -540, respectively, bind proteins that are present in megakaryocytic cells and nonrelated cells as well. 1 Two two NUM CD NumType=Card _ _ _ _ 2 domains domain NOUN NNS Number=Plur _ _ _ _ 3 centered center VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 at at ADP IN _ _ _ _ _ 5 positions position NOUN NNS Number=Plur _ _ _ _ 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 345 345 NUM CD NumType=Card _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 - - SYM SYM _ _ _ _ SpaceAfter=No 10 540 540 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 bind bind ADJ JJ Degree=Pos _ _ _ _ 15 proteins protein NOUN NNS Number=Plur _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 present present ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 nonrelated nonrelate ADJ JJ Degree=Pos _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 as as ADV RB _ _ _ _ _ 26 well well ADV RB Degree=Pos _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5058 # text = Finally, two other domains, located at positions -460 and -510, interact with proteins that are only present in megakaryocytic cells. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 two two NUM CD NumType=Card _ _ _ _ 4 other other ADJ JJ Degree=Pos _ _ _ _ 5 domains domains NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 at at ADP IN _ _ _ _ _ 9 positions position NOUN NNS Number=Plur _ _ _ _ 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 460 460 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 - - SYM SYM _ _ _ _ SpaceAfter=No 14 510 510 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 interact interact NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 proteins protein NOUN NNS Number=Plur _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 only only ADV RB _ _ _ _ _ 22 present present ADJ JJ Degree=Pos _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5059 # text = In addition, deletion of the region containing these two domains results in a significant decrease of the promoter activity. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 deletion deletion NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 region region NOUN NN Number=Sing _ _ _ _ 8 containing contain VERB VBG VerbForm=Ger _ _ _ _ 9 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 10 two two NUM CD NumType=Card _ _ _ _ 11 domains domain NOUN NNS Number=Plur _ _ _ _ 12 results result NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 significant significant ADJ JJ Degree=Pos _ _ _ _ 16 decrease decrease NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 promoter promoter ADJ JJ Degree=Pos _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5060 # text = It is very likely that these domains bind megakaryocyte-specific nuclear proteins acting as positive transcription factors. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 very very ADV RB _ _ _ _ _ 4 likely likely ADJ JJ Degree=Pos _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 domains domain NOUN NNS Number=Plur _ _ _ _ 8 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 megakaryocyte megakaryocyte ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 specific specific ADJ JJ Degree=Pos _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 proteins protein NOUN NNS Number=Plur _ _ _ _ 14 acting act VERB VBG VerbForm=Ger _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 positive positive ADJ JJ Degree=Pos _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5061 # text = Document 003001196 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001196 003001196 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5062 # text = HIV-1 1 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ # sent_id = 5063 # text = Nef protein inhibits the recruitment of AP-1 DNA-binding activity in human T-cells. 1 Nef Nef ADJ JJ Degree=Pos _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 binding bind VERB VBG VerbForm=Ger _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5064 # text = The human immunodeficiency virus type 1 long terminal repeat, HIV-1-LTR, contains binding sites for several cellular transcription factors which contribute to HIV-1 gene expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 4 virus virus NOUN NN Number=Sing _ _ _ _ 5 type type NOUN NN Number=Sing _ _ _ _ 6 1 1 NUM CD NumType=Card _ _ _ _ 7 long long ADJ JJ Degree=Pos _ _ _ _ 8 terminal terminal NOUN NN Number=Sing _ _ _ _ 9 repeat repeat VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 LTR Ltr NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 sites site NOUN NNS Number=Plur _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 several several ADJ JJ Degree=Pos _ _ _ _ 22 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factors factor NOUN NNS Number=Plur _ _ _ _ 25 which which PRON WDT PronType=Rel _ _ _ _ 26 contribute contribute VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 5065 # text = Our previous studies on the function of the HIV-1-encoded Nef protein suggested that Nef may be an inhibitor HIV-1 transcription. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 previous previous ADJ JJ Degree=Pos _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 function function NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 Nef Nef PROPN NNP Number=Sing _ _ _ _ 15 protein protein PROPN NNP Number=Sing _ _ _ _ 16 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 Nef Nef PROPN NNP Number=Sing _ _ _ _ 19 may may AUX MD VerbForm=Fin _ _ _ _ 20 be be AUX VB VerbForm=Inf _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 inhibitor inhibitor ADJ JJ Degree=Pos _ _ _ _ 23 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5066 # text = To determine whether Nef affects the binding of cellular factors implicated in HIV-1 regulation, 32P-labeled oligonucleotides corresponding to the binding sites were incubated with nuclear extracts prepared from Nef-expressing T-cell lines that were not stimulated or were stimulated with T-cell mitogens. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 Nef Nef PROPN NNP Number=Sing _ _ _ _ 5 affects affect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 binding binding NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ _ 11 implicated implicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 32P 32p NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 labeled label VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 22 corresponding correspond VERB VBG VerbForm=Ger _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 binding binding VERB VBG VerbForm=Ger _ _ _ _ 26 sites site NOUN NNS Number=Plur _ _ _ _ 27 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 incubated incubate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 31 extracts extract NOUN NNS Number=Plur _ _ _ _ 32 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 from from ADP IN _ _ _ _ _ 34 Nef Nef PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 expressing expresse ADJ JJ Degree=Pos _ _ _ _ 37 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 lines line NOUN NNS Number=Plur _ _ _ _ 40 that that PRON WDT PronType=Rel _ _ _ _ 41 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 42 not not PART RB _ _ _ _ _ 43 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 44 or or CCONJ CC _ _ _ _ _ 45 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 46 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 47 with with ADP IN _ _ _ _ _ 48 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 cell cell NOUN NN Number=Sing _ _ _ _ 50 mitogens mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 5067 # text = We found that Nef inhibited the recruitment of AP-1 DNA-binding activity in mitogen-stimulated human T-cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 Nef Nef PROPN NNP Number=Sing _ _ _ _ 5 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 5068 # text = Additionally, 1 Additionally additionally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ # sent_id = 5069 # text = Nef expressing cells were transiently transfected with a plasmid in which HIV-1 AP-1 DNA recognition sequences were cloned downstream of the chloramphenicol acetyltransferase (CAT) gene. 1 Nef Nef ADJ JJ Degree=Pos _ _ _ _ 2 expressing expressing ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 transiently transiently ADV RB _ _ _ _ _ 6 transfected transfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 DNA dna NOUN NN Number=Sing _ _ _ _ 19 recognition recognition NOUN NN Number=Sing _ _ _ _ 20 sequences sequence NOUN NNS Number=Plur _ _ _ _ 21 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 cloned clon VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 downstream downstream NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 27 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 CAT Cat NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 5070 # text = Mitogen-mediated transcriptional activation of the CAT gene in this construct was inhibited in Nef-expressing cells but not in control cells. 1 Mitogen Mitogen PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 CAT cat PROPN NNP Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 12 construct construct NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 Nef Nef PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 control control NOUN NN Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5071 # text = These studies suggest that, by inhibiting AP-1 activation, Nef may play a role in regulating HIV-1 gene expression in infected T-cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 by by SCONJ IN _ _ _ _ _ 7 inhibiting inhibiting VERB VBG VerbForm=Ger _ _ _ _ 8 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 Nef Nef PROPN NNP Number=Sing _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 play play VERB VB VerbForm=Inf _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 role role NOUN NN Number=Sing _ _ _ _ 18 in in SCONJ IN _ _ _ _ _ 19 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 20 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 infected infect ADJ JJ Degree=Pos _ _ _ _ 27 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5072 # text = Document 003001200 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001200 003001200 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5073 # text = Cyclosporin 1 Cyclosporin Cyclosporin PROPN NNP Number=Sing _ _ _ _ # sent_id = 5074 # text = A inhibits early mRNA expression of G0/G1 switch gene 2 (G0S2) in cultured human blood mononuclear cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 inhibits inhibits NOUN NNS Number=Plur _ _ _ _ 3 early early ADJ JJ Degree=Pos _ _ _ _ 4 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 G0/G1 G0/G1 NUM CD NumType=Card _ _ _ _ 8 switch switch NOUN NN Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 2 2 NUM CD NumType=Card _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 G0S2 G0s2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 cultured cultured ADJ JJ Degree=Pos _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 blood blood NOUN NN Number=Sing _ _ _ _ 18 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5075 # text = Cyclosporin A (CsA) may achieve its immunosuppressive effects by inhibiting the calcium- and calmodulin-dependent phosphatase calcineurin which is required for activation of target genes by members of the NFAT (nuclear factor of activated T cells) transcription factor family. 1 Cyclosporin Cyclosporin PROPN NNP Number=Sing _ _ _ _ 2 A A PROPN NNP Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 may may AUX MD VerbForm=Fin _ _ _ _ 7 achieve achieve VERB VB VerbForm=Inf _ _ _ _ 8 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 9 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 10 effects effect NOUN NNS Number=Plur _ _ _ _ 11 by by SCONJ IN _ _ _ _ _ 12 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 calmodulin calmodulin NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 20 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 21 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 target target NOUN NN Number=Sing _ _ _ _ 29 genes gene NOUN NNS Number=Plur _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 members member NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 NFAT Nfat PROPN NNP Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 37 factor factor NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 T t PROPN NNP Number=Sing _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 transcription transcription NOUN NN Number=Sing _ _ _ _ 44 factor factor NOUN NN Number=Sing _ _ _ _ 45 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 5076 # text = Among these target genes is the gene encoding interleukin-2 (IL2), a cytokine facilitating progression through the G1 phase of the cell cycle. 1 Among among ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 target target NOUN NN Number=Sing _ _ _ _ 4 genes gene NOUN NNS Number=Plur _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 encoding encoding NOUN NN Number=Sing _ _ _ _ 9 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT : _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 IL2 IL2 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 18 facilitating facilitate VERB VBG VerbForm=Ger _ _ _ _ 19 progression progression NOUN NN Number=Sing _ _ _ _ 20 through through ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 G1 G1 PROPN NNP Number=Sing _ _ _ _ 23 phase phase NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5077 # text = However, IL2 does not reverse CsA inhibition, suggesting that at least one other NFAT-sensitive gene may be involved. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 IL2 IL2 NUM CD NumType=Card _ _ _ _ 4 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 reverse reverse VERB VB VerbForm=Inf _ _ _ _ 7 CsA csa PROPN NNP Number=Sing _ _ _ _ 8 inhibition inhibition NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 at at ADV RB _ _ _ _ _ 13 least least ADV RBS Degree=Sup _ _ _ _ 14 one one NUM CD NumType=Card _ _ _ _ 15 other other ADJ JJ Degree=Pos _ _ _ _ 16 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ _ 20 may may AUX MD VerbForm=Fin _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 involved involved ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 5078 # text = The human G0/G1 switch gene, G0S2, has potential NFAT-binding sites in the 5' flank and encodes a small basic potential phosphoprotein of unknown function. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 G0/G1 G0/g1 NOUN NN Number=Sing _ _ _ _ 4 switch switch NOUN NN Number=Sing _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 G0S2 G0s2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 potential potential ADJ JJ Degree=Pos _ _ _ _ 11 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 binding binding VERB VBG VerbForm=Ger _ _ _ _ 14 sites site NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ' 's PUNCT '' _ _ _ _ _ 19 flank flank NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 small small ADJ JJ Degree=Pos _ _ _ _ 24 basic basic ADJ JJ Degree=Pos _ _ _ _ 25 potential potential NOUN NN Number=Sing _ _ _ _ 26 phosphoprotein phosphoprotein NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 unknown unknown ADJ JJ Degree=Pos _ _ _ _ 29 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5079 # text = Using a sensitive, reverse transcription-polymerase chain reaction (RT-PCR) assay, G0S2 mRNA levels were assayed in cultured blood mononuclear cells. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 sensitive sensitive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 reverse reverse ADJ JJ Degree=Pos _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 9 chain chain NOUN NN Number=Sing _ _ _ _ 10 reaction reaction NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 RT-PCR RT-PCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 G0S2 G0S2 NUM CD NumType=Card _ _ _ _ 17 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 18 levels level NOUN NNS Number=Plur _ _ _ _ 19 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 assayed assay VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 cultured culture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 blood blood NOUN NN Number=Sing _ _ _ _ 24 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5080 # text = Freshly isolated cells contain high levels of G0S2 mRNA which rapidly decline. 1 Freshly freshly ADV RB _ _ _ _ _ 2 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 high high ADJ JJ Degree=Pos _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 G0S2 G0s2 NUM CD NumType=Card _ _ _ _ 9 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 10 which which PRON WDT PronType=Rel _ _ _ _ 11 rapidly rapidly ADV RB _ _ _ _ _ 12 decline decline VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 5081 # text = This "spontaneous stimulation" is also noted with some other G0S genes and has been attributed to some aspect of the isolation procedure. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 " " PUNCT `` _ _ _ _ SpaceAfter=No 3 spontaneous spontaneous ADJ JJ Degree=Pos _ _ _ _ 4 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 " " PUNCT '' _ _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 noted note VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 some some DET DT _ _ _ _ _ 11 other other ADJ JJ Degree=Pos _ _ _ _ 12 G0S g0s NOUN NNS Number=Plur _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 17 attributed attribute VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 some some DET DT _ _ _ _ _ 20 aspect aspect NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 isolation isolation NOUN NN Number=Sing _ _ _ _ 24 procedure procedure NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5082 # text = In cells that have been preincubated to lower mRNA levels, there is a transient increase in G0S2 mRNA, peaking between 1-2 h, in response to Concanavalin-A (ConA), or to the combination of phorbol ester (TPA), and the calcium ionophore, ionomycin. 1 In in ADP IN _ _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 that that PRON WDT PronType=Rel _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 6 preincubated preincubate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 lower lower VERB VB VerbForm=Inf _ _ _ _ 9 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 10 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 there there PRON EX _ _ _ _ _ 13 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 transient transient ADJ JJ Degree=Pos _ _ _ _ 16 increase increase NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 G0S2 G0S2 NUM CD NumType=Card _ _ _ _ 19 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 peaking peak VERB VBG VerbForm=Ger _ _ _ _ 22 between between ADP IN _ _ _ _ _ 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - SYM SYM _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ _ 26 h h INTJ UH _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 response response NOUN NN Number=Sing _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 Concanavalin Concanavalin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 A A PROPN NNP Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 ConA ConA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 or or CCONJ CC _ _ _ _ _ 39 to to ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 combination combination NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 44 ester ester NOUN NN Number=Sing _ _ _ _ 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 calcium calcium NOUN NN Number=Sing _ _ _ _ 52 ionophore ionophore NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 , , PUNCT , _ _ _ _ _ 54 ionomycin ionomycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 5083 # text = Both these responses are inhibited by CsA. 1 Both both DET DT _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 responses response NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 5084 # text = Our results suggest that G0S2 expression is required to commit cells to enter the G1 phase of the cell cycle, and that, while not excluding other possible targets, early inhibition of G0S2 expression by CsA may be important in achieving immunosuppression. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 G0S2 G0s2 NUM CD NumType=Card _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 commit commit VERB VB VerbForm=Inf _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 enter enter VERB VB VerbForm=Inf _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 G1 G1 PROPN NNP Number=Sing _ _ _ _ 16 phase phase NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 while while SCONJ IN _ _ _ _ _ 26 not not ADV RB _ _ _ _ _ 27 excluding exclude VERB VBG VerbForm=Ger _ _ _ _ 28 other other ADJ JJ Degree=Pos _ _ _ _ 29 possible possible ADJ JJ Degree=Pos _ _ _ _ 30 targets target NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 early early ADJ JJ Degree=Pos _ _ _ _ 33 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 G0S2 G0S2 NUM CD NumType=Card _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ _ 37 by by ADP IN _ _ _ _ _ 38 CsA csa PROPN NNP Number=Sing _ _ _ _ 39 may may AUX MD VerbForm=Fin _ _ _ _ 40 be be AUX VB VerbForm=Inf _ _ _ _ 41 important important ADJ JJ Degree=Pos _ _ _ _ 42 in in SCONJ IN _ _ _ _ _ 43 achieving achieve VERB VBG VerbForm=Ger _ _ _ _ 44 immunosuppression immunosuppression NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 5085 # text = G0S2 may be of value as a reporter gene for analyzing the mechanism of action of CsA and its influence on the positive and negative selection of lymphocytes in response to self and not-self antigens. 1 G0S2 G0s2 NOUN NN Number=Sing _ _ _ _ 2 may may AUX MD VerbForm=Fin _ _ _ _ 3 be be AUX VB VerbForm=Inf _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 value value NOUN NN Number=Sing _ _ _ _ 6 as as ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 reporter reporter NOUN NN Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 for for SCONJ IN _ _ _ _ _ 11 analyzing analyze VERB VBG VerbForm=Ger _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 action action NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 CsA csa PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 influence influence NOUN NN Number=Sing _ _ _ _ 21 on on ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 positive positive ADJ JJ Degree=Pos _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 negative negative ADJ JJ Degree=Pos _ _ _ _ 26 selection selection NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 response response NOUN NN Number=Sing _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 self self NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 not not ADV RB _ _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 self self NOUN NN Number=Sing _ _ _ _ 37 antigens antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5086 # text = Document 003001202 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001202 003001202 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5087 # text = ETS1, NFkappaB and AP1 synergistically transactivate the human GM-CSF promoter. 1 ETS1 ETS1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 AP1 AP1 PROPN NNP Number=Sing _ _ _ _ 6 synergistically synergistically ADV RB _ _ _ _ _ 7 transactivate transactivate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 CSF CSF PROPN NNP Number=Sing _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5088 # text = Activation of helper T cells results in coordinate expression of a number of cytokines involved in differentiation, proliferation and activation of the haematopoietic system. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 helper helper ADJ JJR Degree=Cmp _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 results result NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 coordinate coordinate ADJ JJ Degree=Pos _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 number number NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 15 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 haematopoietic haematopoietic ADJ JJ Degree=Pos _ _ _ _ 25 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5089 # text = Granulocyte-macrophage colony stimulating factor (GM-CSF) is one such cytokine, whose increased expression results mostly from increases in transcription. 1 Granulocyte Granulocyte ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 4 colony colony NOUN NN Number=Sing _ _ _ _ 5 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 one one NUM CD NumType=Card _ _ _ _ 14 such such ADJ JJ Degree=Pos _ _ _ _ 15 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 18 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 results result NOUN NNS Number=Plur _ _ _ _ 21 mostly mostly ADV RB _ _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 increases increase NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5090 # text = Cis-acting elements with NFkappaB, AP1 and ETS-like binding motifs have been identified in the promoter region of the GM-CSF gene, and are important or essential for transcriptional activity following T cell activation. 1 Cis Cis PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 acting act VERB VBG VerbForm=Ger _ _ _ _ 4 elements element NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 AP1 AP1 PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 ETS Ets PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 like like SCONJ IN _ _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 motifs motif NOUN NNS Number=Plur _ _ _ _ 15 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 17 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 promoter promoter NOUN NN Number=Sing _ _ _ _ 21 region region NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 CSF CSF PROPN NNP Number=Sing _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 important important ADJ JJ Degree=Pos _ _ _ _ 32 or or CCONJ CC _ _ _ _ _ 33 essential essential ADJ JJ Degree=Pos _ _ _ _ 34 for for ADP IN _ _ _ _ _ 35 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 36 activity activity NOUN NN Number=Sing _ _ _ _ 37 following follow VERB VBG VerbForm=Ger _ _ _ _ 38 T t PROPN NNP Number=Sing _ _ _ _ 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 5091 # text = ETS1 is a transcription factor of the ETS family that is expressed in T cells. 1 ETS1 Ets1 NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 ETS Ets NOUN NN Number=Sing _ _ _ _ 9 family family NOUN NN Number=Sing _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 5092 # text = We have previously shown that ETS1 can transactivate GM-CSF in Jurkat T cells, but only after the cells have been stimulated by treatment with PMA and ionomycin, agents that mimic T cell activation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 ETS1 ETS1 PROPN NNP Number=Sing _ _ _ _ 7 can can AUX MD VerbForm=Fin _ _ _ _ 8 transactivate transactivate VERB VB VerbForm=Inf _ _ _ _ 9 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 CSF CSF PROPN NNP Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 14 T T PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 only only ADV RB _ _ _ _ _ 19 after after ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 24 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 treatment treatment NOUN NN Number=Sing _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 PMA Pma PROPN NNP Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 ionomycin ionomycin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 agents agent NOUN NNS Number=Plur _ _ _ _ 33 that that SCONJ IN _ _ _ _ _ 34 mimic mimic ADJ JJ Degree=Pos _ _ _ _ 35 T t PROPN NNP Number=Sing _ _ _ _ 36 cell cell NOUN NN Number=Sing _ _ _ _ 37 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 5093 # text = Thus we proposed that ETS1, which is expressed constitutively in Jurkat cells, may act in concert with PMA/ionomycin inducible factors. 1 Thus thus ADV RB _ _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 proposed propose VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that ADP IN Typo=Yes _ _ _ _ 5 ETS1 Ets1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 constitutively constitutively ADV RB _ _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 may may AUX MD VerbForm=Fin _ _ _ _ 16 act act VERB VB VerbForm=Inf _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 concert concert NOUN NN Number=Sing _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 ionomycin ionomycin ADP IN _ _ _ _ _ 23 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 24 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5094 # text = Here we show that ETS1 can transactivate a GM-CSF reporter construct in unstimulated Jurkat cells, providing that either NFkappaB or AP1 transcription factors are supplied by co-transfection. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 ETS1 ETS1 PROPN NNP Number=Sing _ _ _ _ 6 can can AUX MD VerbForm=Fin _ _ _ _ 7 transactivate transactivate VERB VB VerbForm=Inf _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 CSF CSF PROPN NNP Number=Sing _ _ _ _ 12 reporter reporter NOUN NN Number=Sing _ _ _ _ 13 construct construct NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 16 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 providing provide VERB VBG VerbForm=Ger _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 either either CCONJ CC _ _ _ _ _ 22 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 AP1 AP1 NUM CD NumType=Card _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 factors factor NOUN NNS Number=Plur _ _ _ _ 27 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 supplied supply VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 co-transfection co-transfection NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 5095 # text = We confirm that binding of endogenous NFkappaB and AP1 is induced following PMA/ionomycin treatment of T cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 confirm confirm VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 7 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 AP1 AP1 PROPN NNP Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 following follow VERB VBG VerbForm=Ger _ _ _ _ 13 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 ionomycin ionomycin ADJ JJ Degree=Pos _ _ _ _ 16 treatment treatment NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 5096 # text = Transactivation by ETS1, NFkappaB and AP1 is synergistic, and mutation of the individual binding sites reveals that the transcriptional activities of these factors are interdependent. 1 Transactivation Transactivation NOUN NN Number=Sing _ _ _ _ 2 by by ADP IN _ _ _ _ _ 3 ETS1 ETS1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 AP1 AP1 PROPN NNP Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 synergistic synergistic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 mutation mutation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 individual individual NOUN NN Number=Sing _ _ _ _ 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 sites site NOUN NNS Number=Plur _ _ _ _ 18 reveals reveal NOUN NNS Number=Plur _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 22 activities activity NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 25 factors factor NOUN NNS Number=Plur _ _ _ _ 26 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 interdependent interdependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5097 # text = Our results suggest that constitutive ETS1, and inducible NFkappaB and AP1, cooperate as part of a higher order transcriptional complex in activated T cells. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 6 ETS1 Ets1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 10 NFkappaB Nfkappab PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 AP1 Ap1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 cooperate cooperate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 part part NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 higher higher ADJ JJR Degree=Cmp _ _ _ _ 20 order order NOUN NN Number=Sing _ _ _ _ 21 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 22 complex complex NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5098 # text = Document 003001205 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001205 003001205 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5099 # text = Synergism between two distinct elements of the HTLV-I enhancer during activation by the trans-activator of HTLV-I. 1 Synergism Synergism NOUN NN Number=Sing _ _ _ _ 2 between between ADP IN _ _ _ _ _ 3 two two NUM CD NumType=Card _ _ _ _ 4 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 5 elements element NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 HTLV Htlv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 enhancer enhancer VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 during during ADP IN _ _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 activator activator NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5100 # text = We have conducted functional studies of the enhancer elements of human T-cell leukemia virus type I (HTLV-I) using the human T-cell lines Jurkat and MOLT 4, which are negative for HTLV-I, and MT-2 and TL-Mor, which carry the proviral genome of HTLV-I. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 conducted conduct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 functional functional ADJ JJ Degree=Pos _ _ _ _ 5 studies study NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 9 elements element NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 15 virus virus NOUN NN Number=Sing _ _ _ _ 16 type type NOUN NN Number=Sing _ _ _ _ 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 using use VERB VBG VerbForm=Ger _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 lines line NOUN NNS Number=Plur _ _ _ _ 29 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 MOLT MOLT PROPN NNP Number=Sing _ _ _ _ 32 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 which which PRON WDT PronType=Rel _ _ _ _ 35 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 36 negative negative ADJ JJ Degree=Pos _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT , _ _ _ _ SpaceAfter=No 40 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 MT Mt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 2 2 NUM CD NumType=Card _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 TL Tl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 Mor Mor PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 , , PUNCT , _ _ _ _ _ 51 which which PRON WDT PronType=Rel _ _ _ _ 52 carry carry VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 53 the the DET DT Definite=Def|PronType=Art _ _ _ _ 54 proviral proviral ADJ JJ Degree=Pos _ _ _ _ 55 genome genome NOUN NN Number=Sing _ _ _ _ 56 of of ADP IN _ _ _ _ _ 57 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 58 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 59 I I PROPN NNP Number=Sing _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 5101 # text = Two distinct elements have been implicated in function of the HTLV-I enhancer. 1 Two two NUM CD NumType=Card _ _ _ _ 2 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 3 elements element NOUN NNS Number=Plur _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 6 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 function function NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 HTLV Htlv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 14 enhancer enhancer VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 5102 # text = One is the 21-base-pair (bp) core element that is responsible for trans-activation by the HTLV-I trans-activator p40tax and that has the ability to bind to cyclic-AMP responsive element binding factor (CREB)-like factor(s). 1 One one PRON PRP _ _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 21 21 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 base base NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 pair pair NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 bp bp NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 core core NOUN NN Number=Sing _ _ _ _ 13 element element NOUN NN Number=Sing _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 -activation -activation NOUN NN Number=Sing _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 25 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 activator activator NOUN NN Number=Sing _ _ _ _ 28 p40tax p40tax NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 31 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 ability ability NOUN NN Number=Sing _ _ _ _ 34 to to PART TO _ _ _ _ _ 35 bind bind VERB VB VerbForm=Inf _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 cyclic cyclic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 AMP Amp NOUN NN Number=Sing _ _ _ _ 40 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 41 element element NOUN NN Number=Sing _ _ _ _ 42 binding bind VERB VBG VerbForm=Ger _ _ _ _ 43 factor factor NOUN NN Number=Sing _ _ _ _ 44 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 45 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 47 - - PUNCT , _ _ _ _ SpaceAfter=No 48 like like ADP IN _ _ _ _ _ 49 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 51 s s X AFX _ _ _ _ SpaceAfter=No 52 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 5103 # text = The other is a region interposed between the 21-bp elements. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 other other ADJ JJ Degree=Pos _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 region region NOUN NN Number=Sing _ _ _ _ 6 interposed interpose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 between between ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 21 21 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 bp bp NOUN NN Number=Sing _ _ _ _ 12 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 5104 # text = In this study we demonstrate that a subfragment (C26) in the region between the 21-bp elements is involved in trans-activation by p40tax, possibly through binding to an NF-kappa B-like nuclear factor or factors. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 subfragment subfragment NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 C26 c26 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 region region NOUN NN Number=Sing _ _ _ _ 15 between between ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 21 21 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 bp bp NOUN NN Number=Sing _ _ _ _ 20 elements element NOUN NNS Number=Plur _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 involved involved ADJ JJ Degree=Pos _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 -activation -activation NOUN NN Number=Sing _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 p40tax p40tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 possibly possibly ADV RB _ _ _ _ _ 30 through through SCONJ IN _ _ _ _ _ 31 binding bind VERB VBG VerbForm=Ger _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 kappa kappa PROPN NNP Number=Sing _ _ _ _ 37 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT , _ _ _ _ SpaceAfter=No 39 like like ADP IN _ _ _ _ _ 40 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 41 factor factor NOUN NN Number=Sing _ _ _ _ 42 or or CCONJ CC _ _ _ _ _ 43 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 5105 # text = Formation of the protein-DNA complex with the C26 subfragment was positively affected by p40tax. 1 Formation Formation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 DNA dna NOUN NN Number=Sing _ _ _ _ 7 complex complex NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 C26 c26 NOUN NN Number=Sing _ _ _ _ 11 subfragment subfragment NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 positively positively ADV RB _ _ _ _ _ 14 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 p40tax p40tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 5106 # text = The C26 element conferred partial responsiveness to p40tax when linked to one copy of the 21-bp element that, by itself, showed little activation in response to p40tax. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 C26 c26 PROPN NNP Number=Sing _ _ _ _ 3 element element NOUN NN Number=Sing _ _ _ _ 4 conferred confer VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 partial partial ADJ JJ Degree=Pos _ _ _ _ 6 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 p40tax p40tax VERB VB VerbForm=Inf _ _ _ _ 9 when when ADV WRB PronType=Int _ _ _ _ 10 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 one one NUM CD NumType=Card _ _ _ _ 13 copy copy NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 21 21 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 bp bp NOUN NN Number=Sing _ _ _ _ 19 element element NOUN NN Number=Sing _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 itself itself PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs|Reflex=Yes _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 little little ADJ JJ Degree=Pos _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 response response NOUN NN Number=Sing _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 p40tax p40tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 5107 # text = However, the C26 element alone, even when repeated, could not be activated by p40tax, unlike other NF-kappa B-binding elements. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 C26 c26 PROPN NNP Number=Sing _ _ _ _ 5 element element NOUN NN Number=Sing _ _ _ _ 6 alone alone ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 even even ADV RB _ _ _ _ _ 9 when when ADV WRB PronType=Int _ _ _ _ 10 repeated repeate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 could could AUX MD VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 p40tax p40tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 unlike unlike ADP IN _ _ _ _ _ 20 other other ADJ JJ Degree=Pos _ _ _ _ 21 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa NOUN NN Number=Sing _ _ _ _ 24 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 binding binding VERB VBG VerbForm=Ger _ _ _ _ 27 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5108 # text = In contrast, the C26 element itself was profoundly activated upon stimulation with 12-O-tetradecanoylphorbol-13-acetate. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 C26 c26 PROPN NNP Number=Sing _ _ _ _ 6 element element NOUN NN Number=Sing _ _ _ _ 7 itself itself PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs|Reflex=Yes _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 profoundly profoundly ADV RB _ _ _ _ _ 10 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 upon upon ADP IN _ _ _ _ _ 12 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 12-O-tetradecanoylphorbol 12-O-tetradecanoylphorbol PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 -acetate -acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 5109 # text = These findings therefore suggest that the HTLV-I enhancer contains multiple functional elements, including binding sites for at least CREB- and NF-kappa B-like factors, which synergistically cooperate in activation of the HTLV-I enhancer in response to p40tax. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 therefore therefore ADV RB _ _ _ _ _ 4 suggest suggest VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 enhancer enhancer VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 13 functional functional ADJ JJ Degree=Pos _ _ _ _ 14 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 including include VERB VBG VerbForm=Ger _ _ _ _ 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 sites site NOUN NNS Number=Plur _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 at at ADV RB _ _ _ _ _ 21 least least ADV RBS Degree=Sup _ _ _ _ 22 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa PROPN NNP Number=Sing _ _ _ _ 28 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 like like ADP IN _ _ _ _ _ 31 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 which which PRON WDT PronType=Rel _ _ _ _ 34 synergistically synergistically ADV RB _ _ _ _ _ 35 cooperate cooperate VERB VB VerbForm=Inf _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 activation activation NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 HTLV Htlv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT , _ _ _ _ SpaceAfter=No 42 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 43 enhancer enhancer VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 response response NOUN NN Number=Sing _ _ _ _ 46 to to ADP IN _ _ _ _ _ 47 p40tax p40tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 5110 # text = Our results also demonstrate that TPA-dependent activation of the HTLV-I enhancer may be mediated through the C26 element. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 TPA TPa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 HTLV Htlv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 15 enhancer enhancer VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 may may AUX MD VerbForm=Fin _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 through through ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 C26 c26 NOUN NN Number=Sing _ _ _ _ 22 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5111 # text = Document 003001208 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001208 003001208 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5112 # text = Regulation of sialoadhesin expression on rat macrophages. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 sialoadhesin sialoadhesin ADJ JJ Degree=Pos _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 rat rat NOUN NN Number=Sing _ _ _ _ 7 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 5113 # text = Induction by glucocorticoids and enhancement by IFN-beta, IFN-gamma, IL-4, and lipopolysaccharide. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 by by ADP IN _ _ _ _ _ 3 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 IFN IFN NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5114 # text = Sialoadhesin is a macrophage-restricted member of the Ig superfamily that mediates adhesion with lymphoid and myeloid cells. 1 Sialoadhesin Sialoadhesin PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 macrophage macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 member member NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 Ig ig PROPN NNP Number=Sing _ _ _ _ 11 superfamily superfamily NOUN NN Number=Sing _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 lymphoid lymphoid NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 5115 # text = It is expressed on a subpopulation of macrophages in lymphoid tissues and in chronic inflammation (e.g., during autoimmune diseases). 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 subpopulation subpopulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 11 tissues tissue NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 15 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 e.g. e.g. X FW _ _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 during during ADP IN _ _ _ _ _ 20 autoimmune autoimmune ADJ JJ Degree=Pos _ _ _ _ 21 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 5116 # text = We have studied the regulation of sialoadhesin expression in vitro and show that glucocorticoids (GC) induce sialoadhesin expression on freshly isolated rat macrophages and the rat macrophage cell line R2. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 studied studie VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 regulation regulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 sialoadhesin sialoadhesin ADJ JJ Degree=Pos _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 vitro vitro NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 GC GC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 induce induce NOUN NN Number=Sing _ _ _ _ 19 sialoadhesin sialoadhesin NOUN NN Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 on on ADP IN _ _ _ _ _ 22 freshly freshly ADV RB _ _ _ _ _ 23 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 rat rat NOUN NN Number=Sing _ _ _ _ 25 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 rat rat NOUN NN Number=Sing _ _ _ _ 29 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 line line NOUN NN Number=Sing _ _ _ _ 32 R2 r2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 5117 # text = The cytokines IFN-beta, IFN-gamma, IL-4, and LPS, although unable to induce sialoadhesin expression by themselves, were able to enhance GC-mediated induction of sialoadhesin. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 3 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 although although SCONJ IN _ _ _ _ _ 19 unable unable ADJ JJ Degree=Pos _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 induce induce VERB VB VerbForm=Inf _ _ _ _ 22 sialoadhesin sialoadhesin ADP IN _ _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 themselves themself PRON PRP Case=Acc|Number=Plur|Person=1|PronType=Prs|Reflex=Yes _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 able able ADJ JJ Degree=Pos _ _ _ _ 29 to to PART TO _ _ _ _ _ 30 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 31 GC Gc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 induction induction NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 sialoadhesin sialoadhesin NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 5118 # text = Sialoadhesin expression was functional as shown by cell adhesion assays with human RBCs. 1 Sialoadhesin Sialoadhesin ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 functional functional ADJ JJ Degree=Pos _ _ _ _ 5 as as SCONJ IN _ _ _ _ _ 6 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 10 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 RBCs RBC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 5119 # text = Northern blotting experiments indicated that regulation predominantly occurred at the mRNA level. 1 Northern northern ADJ JJ Degree=Pos _ _ _ _ 2 blotting blotting NOUN NN Number=Sing _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ _ 4 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 regulation regulation NOUN NN Number=Sing _ _ _ _ 7 predominantly predominantly ADV RB _ _ _ _ _ 8 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 at at ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 12 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 5120 # text = Comparison of the different combinations of GC and cytokines/LPS revealed differences in the level of GC-dependent enhancement of sialoadhesin expression, with IFN-beta and IL-4 being more potent than IFN-gamma and LPS. 1 Comparison Comparison NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 different different ADJ JJ Degree=Pos _ _ _ _ 5 combinations combination NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 GC Gc NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 LPS Lp NOUN NNS Number=Plur _ _ _ _ 12 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 differences difference NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 level level NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 GC GC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 21 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 sialoadhesin sialoadhesin NOUN NN Number=Sing _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 beta beta PROPN NNP Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 4 4 NUM CD NumType=Card _ _ _ _ 34 being be AUX VBG VerbForm=Ger _ _ _ _ 35 more more ADV RBR _ _ _ _ _ 36 potent potent ADJ JJ Degree=Pos _ _ _ _ 37 than than ADP IN _ _ _ _ _ 38 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 gamma gamma PROPN NNP Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 5121 # text = Moreover, the effects of IFN-gamma and LPS could be reproduced by priming, whereas IFN-beta and IL-4 were required simultaneously with GC. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effects effect NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 gamma gamma PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 LPS LPS PROPN NNP Number=Sing _ _ _ _ 11 could could AUX MD VerbForm=Fin _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 reproduced reproduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 priming priming NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 whereas whereas SCONJ IN _ _ _ _ _ 18 IFN IFN NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 beta beta NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 4 4 NUM CD NumType=Card _ _ _ _ 25 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 simultaneously simultaneously ADV RB _ _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 GC GC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5122 # text = The regulation of sialoadhesin expression was mediated by the GC receptor, and not by mineralocorticoid receptor, as shown by inhibition experiments with specific antagonists. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 sialoadhesin sialoadhesin ADJ JJ Degree=Pos _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 GC GC PROPN NNP Number=Sing _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 not not ADV RB _ _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 mineralocorticoid mineralocorticoid ADJ JJ Degree=Pos _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 as as SCONJ IN _ _ _ _ _ 20 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 23 experiments experiment NOUN NNS Number=Plur _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 specific specific ADJ JJ Degree=Pos _ _ _ _ 26 antagonists antagonist NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5123 # text = Finally, it is demonstrated that macrophages in the adrenal gland, the major site of endogenous GC production, express sialoadhesin. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 adrenal adrenal ADJ JJ Degree=Pos _ _ _ _ 11 gland gland NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 major major ADJ JJ Degree=Pos _ _ _ _ 15 site site NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 18 GC GC PROPN NNP Number=Sing _ _ _ _ 19 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 express express ADJ JJ Degree=Pos _ _ _ _ 22 sialoadhesin sialoadhesin NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 5124 # text = This study demonstrates that GC act as a primary inducer of sialoadhesin expression on rat macrophages, and that the response can be enhanced by IFN-beta, T cell-derived cytokines, or LPS. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 GC Gc PROPN NNP Number=Sing _ _ _ _ 6 act act NOUN NN Number=Sing _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 primary primary ADJ JJ Degree=Pos _ _ _ _ 10 inducer inducer NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 sialoadhesin sialoadhesin ADJ JJ Degree=Pos _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 rat rat NOUN NN Number=Sing _ _ _ _ 16 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 response response NOUN NN Number=Sing _ _ _ _ 22 can can AUX MD VerbForm=Fin _ _ _ _ 23 be be AUX VB VerbForm=Inf _ _ _ _ 24 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 T t PROPN NNP Number=Sing _ _ _ _ 31 cell cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 or or CCONJ CC _ _ _ _ _ 37 LPS Lp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5125 # text = Document 003001209 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001209 003001209 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5126 # text = Transcription factor activation in lymphokine activated killer cells and lymphocytes from patients receiving IL-2 immunotherapy. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 6 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 killer killer NOUN NN Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 patients patient NOUN NNS Number=Plur _ _ _ _ 13 receiving receive VERB VBG VerbForm=Ger _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 immunotherapy immunotherapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5127 # text = Administration of the cytokine interleukin-2 (IL-2) can result in therapeutic benefits for individuals with renal cell carcinoma and melanoma. 1 Administration Administration NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 5 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 X LS _ _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 can can AUX MD VerbForm=Fin _ _ _ _ 14 result result VERB VB VerbForm=Inf _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 17 benefits benefit NOUN NNS Number=Plur _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 individuals individual NOUN NNS Number=Plur _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 renal renal ADJ JJ Degree=Pos _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 carcinoma carcinoma NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 melanoma melanoma NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5128 # text = Here we report an analysis of the transcription factor families AP-1, Sp1, NF-kappaB, and signal transducers and activators of transcription (STAT) in cancer patients' lymphocytes before and after IL-2 immunotherapy, as assessed by a gel-shift assay. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 analysis analysis NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 families family NOUN NNS Number=Plur _ _ _ _ 11 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 Sp1 Sp1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 signal signal ADJ JJ Degree=Pos _ _ _ _ 23 transducers transducer NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 activators activator NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 STAT STAT NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 cancer cancer NOUN NN Number=Sing _ _ _ _ 33 patients patient NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 ' 's PUNCT '' _ _ _ _ _ 35 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 36 before before ADP IN _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 after after ADP IN _ _ _ _ _ 39 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 2 2 NUM CD NumType=Card _ _ _ _ 42 immunotherapy immunotherapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 as as SCONJ IN _ _ _ _ _ 45 assessed assess VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 by by ADP IN _ _ _ _ _ 47 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 48 gel gel NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 shift shift NOUN NN Number=Sing _ _ _ _ 51 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 5129 # text = An in vitro surrogate of IL-2 immunotherapy is the incubation of fresh peripheral blood mononuclear cells (PBMC) from healthy individuals in IL-2 for several days, resulting in the production of lymphokine-activated killer (LAK) activity in these cultures. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 4 surrogate surrogate NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 immunotherapy immunotherapy NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 incubation incubation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 fresh fresh ADJ JJ Degree=Pos _ _ _ _ 15 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 16 blood blood NOUN NN Number=Sing _ _ _ _ 17 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 PBMC PBMC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 24 individuals individual NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 several several ADJ JJ Degree=Pos _ _ _ _ 31 days day NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 resulting result VERB VBG VerbForm=Ger _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 production production NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 lymphokine lymphokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 killer killer NOUN NN Number=Sing _ _ _ _ 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 LAK LAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ _ 45 activity activity NOUN NN Number=Sing _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 48 cultures culture NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 5130 # text = One purpose of this study was to describe the profile of transcription factor activation in these different populations, and assess whether the patterns observed correlated with functional differences in these cells. 1 One one NUM CD NumType=Card _ _ _ _ 2 purpose purpose NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 study study NOUN NN Number=Sing _ _ _ _ 6 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 describe describe VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 profile profile NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 17 different different ADJ JJ Degree=Pos _ _ _ _ 18 populations population NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 assess assess NOUN NN Number=Sing _ _ _ _ 22 whether whether SCONJ IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 patterns pattern NOUN NNS Number=Plur _ _ _ _ 25 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 correlated correlate ADJ JJ Degree=Pos _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 functional functional ADJ JJ Degree=Pos _ _ _ _ 29 differences difference NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 5131 # text = Prior to in vivo IL-2 administration, the typical binding pattern of transcription factors in PBMC from patients resembled that seen in fresh PBMC from healthy individuals. 1 Prior prior ADJ JJ Degree=Pos _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 vivo vivo PROPN NNP Number=Sing _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 administration administration NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 typical typical ADJ JJ Degree=Pos _ _ _ _ 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 pattern pattern NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factors factor NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 PBMC Pbmc NOUN NN Number=Sing _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 patients patient NOUN NNS Number=Plur _ _ _ _ 21 resembled resemble VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 that that SCONJ IN _ _ _ _ _ 23 seen see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 fresh fresh ADJ JJ Degree=Pos _ _ _ _ 26 PBMC Pbmc NOUN NN Number=Sing _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 29 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5132 # text = Over a 3-week course of IL-2 therapy, in most patients the binding patterns of AP-1 , Sp1, and NF-kappaB proteins changed to resemble those seen in PBMC activated by IL-2 in vitro. 1 Over over ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 week week NOUN NN Number=Sing _ _ _ _ 6 course course NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 therapy therapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 most most ADJ JJS Degree=Sup _ _ _ _ 15 patients patient NOUN NNS Number=Plur _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 patterns pattern NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 , , PUNCT , _ _ _ _ _ 24 Sp1 sp1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 30 proteins protein NOUN NNS Number=Plur _ _ _ _ 31 changed chang VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 to to PART TO _ _ _ _ _ 33 resemble resemble VERB VB VerbForm=Inf _ _ _ _ 34 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 35 seen see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 PBMC PBMC PROPN NNP Number=Sing _ _ _ _ 38 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 by by ADP IN _ _ _ _ _ 40 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 2 2 NUM CD NumType=Card _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 5133 # text = However, the cells obtained from IL-2-treated patients did not have low-level constitutive expression of STAT binding factors as did LAK cells. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 obtained obtain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 patients patient NOUN NNS Number=Plur _ _ _ _ 13 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 have have VERB VB VerbForm=Inf _ _ _ _ 16 low low ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 level level NOUN NN Number=Sing _ _ _ _ 19 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 STAT Stat SCONJ IN _ _ _ _ _ 23 binding binding VERB VBG VerbForm=Ger _ _ _ _ 24 factors factor NOUN NNS Number=Plur _ _ _ _ 25 as as SCONJ IN _ _ _ _ _ 26 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 LAK LAK PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5134 # text = When these patient cells were further stimulated by IL-2 in vitro, additional differences in STAT induction patterns were noted. 1 When when ADV WRB PronType=Int _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 patient patient ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 further further ADV RB _ _ _ _ _ 7 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 vitro vitro ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 additional additional ADJ JJ Degree=Pos _ _ _ _ 16 differences difference NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 19 induction induction NOUN NN Number=Sing _ _ _ _ 20 patterns pattern NOUN NNS Number=Plur _ _ _ _ 21 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 noted note VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 5135 # text = These data provide further information on the molecular events occurring in immune cells generated through in vivo and in vitro administration of IL-2, and further document that there is not a precise congruence between PBMC activated in vivo and in vitro by IL-2. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 further further ADJ JJ Degree=Pos _ _ _ _ 5 information information NOUN NN Number=Sing _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 9 events event NOUN NNS Number=Plur _ _ _ _ 10 occurring occurre VERB VBG VerbForm=Ger _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 immune immune ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 through through ADP IN _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 vivo vivo NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 21 administration administration NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 further further ADJ JJ Degree=Pos _ _ _ _ 29 document document NOUN NN Number=Sing _ _ _ _ 30 that that SCONJ IN _ _ _ _ _ 31 there there PRON EX _ _ _ _ _ 32 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 not not PART RB _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 precise precise ADJ JJ Degree=Pos _ _ _ _ 36 congruence congruence NOUN NN Number=Sing _ _ _ _ 37 between between ADP IN _ _ _ _ _ 38 PBMC PBMC PROPN NNP Number=Sing _ _ _ _ 39 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 vivo vivo NOUN NN Number=Sing _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 vitro vitro NOUN NN Number=Sing _ _ _ _ 45 by by ADP IN _ _ _ _ _ 46 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5136 # text = Document 003001214 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001214 003001214 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5137 # text = Positive and negative regulation of immunoglobulin gene expression by a novel B-cell-specific enhancer element. 1 Positive positive ADJ JJ Degree=Pos _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 negative negative ADJ JJ Degree=Pos _ _ _ _ 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 novel novel NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 16 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 17 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5138 # text = A new B-cell-specific enhancer element has been identified 3' of E4 and the octamerlike motifs in the human immunoglobulin heavy-chain gene enhancer. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 new new ADJ JJ Degree=Pos _ _ _ _ 3 B- B- PUNCT : _ _ _ _ SpaceAfter=No 4 cell-specific cell-specific ADJ JJ Degree=Pos _ _ _ _ 5 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 6 element element NOUN NN Number=Sing _ _ _ _ 7 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 9 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ' ' NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 E4 E4 PROPN NNP Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 octamerlike octamerlike ADJ JJ Degree=Pos _ _ _ _ 17 motifs motif NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 22 heavy heavy ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 chain chain NOUN NN Number=Sing _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5139 # text = Tandem copies of this 67-bp MnlI-AluI fragment, when fused to the chloramphenicol acetyltransferase gene driven by the conalbumin promoter, stimulated transcription in B cells but not in Jurkat T cells or HeLa cells. 1 Tandem tandem NOUN NN Number=Sing _ _ _ _ 2 copies copy NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 67 67 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT : _ _ _ _ SpaceAfter=No 7 bp bp NOUN NN Number=Sing _ _ _ _ 8 MnlI MnlI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 AluI AluI PROPN NNP Number=Sing _ _ _ _ 11 fragment fragment NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 when when ADV WRB PronType=Int _ _ _ _ 14 fused fuse VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 18 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ _ 20 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 conalbumin conalbumin NOUN NN Number=Sing _ _ _ _ 24 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 B b ADJ JJ Degree=Pos _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 but but CCONJ CC _ _ _ _ _ 32 not not PART RB _ _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 35 T T PROPN NNP Number=Sing _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ _ 37 or or CCONJ CC _ _ _ _ _ 38 HeLa Hela PROPN NNP Number=Sing _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 5140 # text = Footprinting analysis revealed that the identical sequence CCGAAACTGAAAAGG, designated E6, was protected by nuclear extracts from B cells, T cells, or HeLa cells. 1 Footprinting Footprint VERB VBG VerbForm=Ger _ _ _ _ 2 analysis analysis PRON DT Number=Sing|PronType=Dem _ _ _ _ 3 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 identical identical ADJ JJ Degree=Pos _ _ _ _ 7 sequence sequence NOUN NN Number=Sing _ _ _ _ 8 CCGAAACTGAAAAGG Ccgaaactgaaaagg PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 designated designate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 E6 e6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 protected protect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 extracts extract NOUN NNS Number=Plur _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 B b ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5141 # text = Gel mobility shift assays using a synthetic E6 motif detected a B-cell-specific complex in addition to a ubiquitous band found also in T cells and HeLa cells. 1 Gel gel NOUN NN Number=Sing _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 using use VERB VBG VerbForm=Ger _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 8 E6 e6 PROPN NNP Number=Sing _ _ _ _ 9 motif motif NOUN NN Number=Sing _ _ _ _ 10 detected detect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 specific specific ADJ JJ Degree=Pos _ _ _ _ 16 complex complex NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 addition addition NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 22 band band NOUN NN Number=Sing _ _ _ _ 23 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 also also ADV RB _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 T T PROPN NNP Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 HeLa Hela ADJ JJ Degree=Pos _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 5142 # text = In agreement with the results of gel retardation assays, tandem copies of the E6 motif stimulated transcription in ARH77 and Raji cells but not in Jurkat or HeLa cells. 1 In in ADP IN _ _ _ _ _ 2 agreement agreement NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 gel gel NOUN NN Number=Sing _ _ _ _ 8 retardation retardation NOUN NN Number=Sing _ _ _ _ 9 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 tandem tandem NOUN NN Number=Sing _ _ _ _ 12 copies copy NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 E6 e6 PROPN NNP Number=Sing _ _ _ _ 16 motif motif NOUN NN Number=Sing _ _ _ _ 17 stimulated stimulate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 ARH77 ARH77 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 Raji Raji PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 but but CCONJ CC _ _ _ _ _ 25 not not PART RB _ _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 5143 # text = Furthermore, a mutant E6 motif lost both in vitro binding activity and in vivo enhancer activity. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 5 E6 e6 PROPN NNP Number=Sing _ _ _ _ 6 motif motif NOUN NN Number=Sing _ _ _ _ 7 lost lose VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 both both CCONJ CC _ _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 vitro vitro NOUN NN Number=Sing _ _ _ _ 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 vivo vivo NOUN NN Number=Sing _ _ _ _ 16 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 5144 # text = In striking contrast to the mouse 1 In in ADP IN _ _ _ _ _ 2 striking strik ADJ JJ Degree=Pos _ _ _ _ 3 contrast contrast NOUN NN Number=Sing _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 mouse mouse NOUN NN Number=Sing _ _ _ _ # sent_id = 5145 # text = Ig heavy-chain enhancer, in which the octamer motif acts as a B-cell-specific enhancer element, the human enhancer contains an octamerlike sequence with one base substitution which bound octamer-binding proteins with only very low affinity and showed no enhancer activity of its own. 1 Ig ig ADJ JJ Degree=Pos _ _ _ _ 2 heavy heavy ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 chain chain NOUN NN Number=Sing _ _ _ _ 5 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 octamer octamer NOUN NN Number=Sing _ _ _ _ 11 motif motif NOUN NN Number=Sing _ _ _ _ 12 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 specific specific ADJ JJ Degree=Pos _ _ _ _ 19 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 20 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 25 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 octamerlike octamerlike ADJ JJ Degree=Pos _ _ _ _ 28 sequence sequence NOUN NN Number=Sing _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 one one NUM CD NumType=Card _ _ _ _ 31 base base NOUN NN Number=Sing _ _ _ _ 32 substitution substitution NOUN NN Number=Sing _ _ _ _ 33 which which PRON WDT PronType=Rel _ _ _ _ 34 bound bound VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 binding binding VERB VBG VerbForm=Ger _ _ _ _ 38 proteins protein NOUN NNS Number=Plur _ _ _ _ 39 with with ADP IN _ _ _ _ _ 40 only only ADV RB _ _ _ _ _ 41 very very ADV RB _ _ _ _ _ 42 low low ADJ JJ Degree=Pos _ _ _ _ 43 affinity affinity NOUN NN Number=Sing _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 46 no no DET DT _ _ _ _ _ 47 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 48 activity activity NOUN NN Number=Sing _ _ _ _ 49 of of ADP IN _ _ _ _ _ 50 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 51 own own ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 5146 # text = Interestingly, the MnlI-AluI fragment could suppress the basal-level activity of the conalbumin promoter in both Jurkat and HeLa cells. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 MnlI MnlI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 AluI AluI PROPN NNP Number=Sing _ _ _ _ 7 fragment fragment NOUN NN Number=Sing _ _ _ _ 8 could could AUX MD VerbForm=Fin _ _ _ _ 9 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 basal basal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 level level NOUN NN Number=Sing _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 conalbumin conalbumin ADJ JJ Degree=Pos _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 both both CCONJ CC _ _ _ _ _ 21 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5147 # text = Moreover, simian virus 40 enhancer activity was blocked by the MnlI-AluI fragment in HeLa cells but not in B cells. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 simian simian ADJ JJ Degree=Pos _ _ _ _ 4 virus virus NOUN NN Number=Sing _ _ _ _ 5 40 40 NUM CD NumType=Card _ _ _ _ 6 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 MnlI MnlI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 AluI AluI PROPN NNP Number=Sing _ _ _ _ 15 fragment fragment NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 B b ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5148 # text = Thus, the novel enhancer element identified in this study is probably a target site for both positive and negative factors. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 novel novel ADJ JJ Degree=Pos _ _ _ _ 5 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 6 element element NOUN NN Number=Sing _ _ _ _ 7 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 10 study study NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 probably probably ADV RB _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 target target NOUN NN Number=Sing _ _ _ _ 15 site site NOUN NN Number=Sing _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 both both CCONJ CC _ _ _ _ _ 18 positive positive ADJ JJ Degree=Pos _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 negative negative ADJ JJ Degree=Pos _ _ _ _ 21 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5149 # text = Document 003001215 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001215 003001215 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5150 # text = A family of serine proteases expressed exclusively in myelo-monocytic cells specifically processes the nuclear factor-kappa B subunit p65 in vitro and may impair human immunodeficiency virus replication in these cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 family family NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 serine serine NOUN NN Number=Sing _ _ _ _ 5 proteases protease NOUN NNS Number=Plur _ _ _ _ 6 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 exclusively exclusively ADV RB _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 myelo myelo X AFX _ _ _ _ SpaceAfter=No 10 -monocytic -monocytic ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 specifically specifically ADV RB _ _ _ _ _ 13 processes process VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ _ 20 subunit subunit NOUN NN Number=Sing _ _ _ _ 21 p65 p65 NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 vitro vitro NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 may may AUX MD VerbForm=Fin _ _ _ _ 26 impair impair VERB VB VerbForm=Inf _ _ _ _ 27 human human ADJ JJ Degree=Pos _ _ _ _ 28 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 29 virus virus NOUN NN Number=Sing _ _ _ _ 30 replication replication NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5151 # text = Two groups of U937 promonocytic cells were obtained by limiting dilution cloning which differed strikingly in their ability to support human immunodeficiency virus 1 (HIV-1) replication. 1 Two two NUM CD NumType=Card _ _ _ _ 2 groups group NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 U937 U937 NUM CD NumType=Card _ _ _ _ 5 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 obtained obtain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by SCONJ IN _ _ _ _ _ 10 limiting limite VERB VBG VerbForm=Ger _ _ _ _ 11 dilution dilution NOUN NN Number=Sing _ _ _ _ 12 cloning cloning NOUN NN Number=Sing _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 differed differ VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 strikingly strikingly ADV RB _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 ability ability NOUN NN Number=Sing _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 support support VERB VB VerbForm=Inf _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 23 virus virus NOUN NN Number=Sing _ _ _ _ 24 1 1 NUM CD NumType=Card _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 5152 # text = "Plus" clones replicated the virus efficiently, whereas "minus" clones did not. 1 " " PUNCT `` _ _ _ _ SpaceAfter=No 2 Plus plus PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 " " PUNCT '' _ _ _ _ _ 4 clones clone NOUN NNS Number=Plur _ _ _ _ 5 replicated replicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 virus virus NOUN NN Number=Sing _ _ _ _ 8 efficiently efficiently ADV RB _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 whereas whereas SCONJ IN _ _ _ _ _ 11 " " PUNCT `` _ _ _ _ SpaceAfter=No 12 minus minus NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 " " PUNCT '' _ _ _ _ _ 14 clones clone NOUN NNS Number=Plur _ _ _ _ 15 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 5153 # text = We examined these clones for differences in nuclear factor (NF)-kappa B activity which might account for the observed phenomenon. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 clones clone NOUN NNS Number=Plur _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 differences difference NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 might might AUX MD VerbForm=Fin _ _ _ _ 19 account account VERB VB VerbForm=Inf _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 observed observed ADJ JJ Degree=Pos _ _ _ _ 23 phenomenon phenomenon NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5154 # text = Stimulation of plus clones liberated the classical p50-p65 complex from cytoplasmic pools, whereas minus clones produced an apparently novel, faster-migrating complex, as judged by electrophoretic mobility shift assays. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 plus plus CCONJ CC _ _ _ _ _ 4 clones clone NOUN NNS Number=Plur _ _ _ _ 5 liberated liberate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 classical classical ADJ JJ Degree=Pos _ _ _ _ 8 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 p65 p65 NOUN NN Number=Sing _ _ _ _ 11 complex complex NOUN NN Number=Sing _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 14 pools pool NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 whereas wherea SCONJ IN _ _ _ _ _ 17 minus minus ADJ JJ Degree=Pos _ _ _ _ 18 clones clone NOUN NNS Number=Plur _ _ _ _ 19 produced produce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 apparently apparently ADV RB _ _ _ _ _ 22 novel novel ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 faster faster NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 migrating migrating NOUN NN Number=Sing _ _ _ _ 27 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 as as SCONJ IN _ _ _ _ _ 30 judged judge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 33 mobility mobility NOUN NN Number=Sing _ _ _ _ 34 shift shift NOUN NN Number=Sing _ _ _ _ 35 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 5155 # text = It is surprising that the faster-migrating complex was composed also of p50 and p65. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 surprising surprising ADJ JJ Degree=Pos _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 faster faster NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 migrating migrating NOUN NN Number=Sing _ _ _ _ 9 complex complex NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 also also ADV RB _ _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 p50 p50 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 5156 # text = However, the p65 subunit was COOH-terminally truncated, as shown by immunoprecipitation. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 p65 p65 NOUN NN Number=Sing _ _ _ _ 5 subunit subunit NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 COOH COOH ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 terminally terminally ADV RB _ _ _ _ _ 10 truncated truncate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 as as SCONJ IN _ _ _ _ _ 13 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 immunoprecipitation immunoprecipitation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 5157 # text = The truncation resulted from limited proteolysis of p65 during cellular extraction which released particular lysosomal serine proteases, such as elastase, cathepsin G, and proteinase 3. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 truncation truncation NOUN NN Number=Sing _ _ _ _ 3 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 limited limited ADJ JJ Degree=Pos _ _ _ _ 6 proteolysis proteolysis NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 p65 p65 NUM CD NumType=Card _ _ _ _ 9 during during ADP IN _ _ _ _ _ 10 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 11 extraction extraction NOUN NN Number=Sing _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 released release VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 particular particular ADJ JJ Degree=Pos _ _ _ _ 15 lysosomal lysosomal ADJ JJ Degree=Pos _ _ _ _ 16 serine serine NOUN NN Number=Sing _ _ _ _ 17 proteases protease NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 such such ADJ JJ Degree=Pos _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 elastase elastase NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 cathepsin cathepsin NOUN NN Number=Sing _ _ _ _ 24 G G NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 proteinase proteinase NOUN NN Number=Sing _ _ _ _ 28 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5158 # text = These specific proteases are coordinately expressed and were present exclusively in the minus U937 clones, but not in the plus clones, as demonstrated in the case of cathepsin G. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 specific specific ADJ JJ Degree=Pos _ _ _ _ 3 proteases protease NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 coordinately coordinately ADV RB _ _ _ _ _ 6 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 present present ADJ JJ Degree=Pos _ _ _ _ 10 exclusively exclusively ADV RB _ _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 minus minus ADJ JJ Degree=Pos _ _ _ _ 14 U937 U937 NOUN NN Number=Sing _ _ _ _ 15 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 not not ADV RB _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 plus plus ADJ JJ Degree=Pos _ _ _ _ 22 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 as as SCONJ IN _ _ _ _ _ 25 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 case case NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 cathepsin cathepsin NOUN NN Number=Sing _ _ _ _ 31 G G NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 5159 # text = In addition, these proteases were detected in certain subclones of THP-1 and HL-60 cells and in primary monocytes, in each case correlating with the truncated from of p65. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 proteases protease NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 certain certain ADJ JJ Degree=Pos _ _ _ _ 10 subclones subclone NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 HL Hl NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 60 60 NUM CD NumType=Card _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 primary primary ADJ JJ Degree=Pos _ _ _ _ 23 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 each each DET DT _ _ _ _ _ 27 case case NOUN NN Number=Sing _ _ _ _ 28 correlating correlat VERB VBG VerbForm=Ger _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 truncated truncate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 from from ADP IN _ _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 5160 # text = We demonstrate in vitro cleavage of p65 by purified elastase and cathepsin G. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 5 cleavage cleavage NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 p65 p65 NUM CD NumType=Card _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 elastase elastase NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 cathepsin cathepsin NOUN NN Number=Sing _ _ _ _ 13 G g NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 5161 # text = It is possible that particular serine proteases may have inhibiting effects on the replication of HIV-1 in myelo-monocytic cells. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 possible possible ADJ JJ Degree=Pos _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 particular particular ADJ JJ Degree=Pos _ _ _ _ 6 serine serine NOUN NN Number=Sing _ _ _ _ 7 proteases protease NOUN NNS Number=Plur _ _ _ _ 8 may may AUX MD VerbForm=Fin _ _ _ _ 9 have have VERB VB VerbForm=Inf _ _ _ _ 10 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 11 effects effect NOUN NNS Number=Plur _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 replication replication NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 myelo myelo X AFX _ _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5162 # text = The data also demonstrate that special precautions must be taken when making extracts from myelo-monocytic cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 special special ADJ JJ Degree=Pos _ _ _ _ 7 precautions precaution NOUN NNS Number=Plur _ _ _ _ 8 must must AUX MD VerbForm=Fin _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 taken take VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 when when ADV WRB PronType=Int _ _ _ _ 12 making make VERB VBG VerbForm=Ger _ _ _ _ 13 extracts extract NOUN NNS Number=Plur _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 myelo myelo X AFX _ _ _ _ SpaceAfter=No 16 -monocytic -monocytic ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5163 # text = Document 003001217 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001217 003001217 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5164 # text = Nuclear factor-kappaB activation in human monocytes stimulated with lipopolysaccharide is inhibited by fibroblast conditioned medium and exogenous PGE2. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 -kappaB -kappab NOUN NN Number=Sing _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 8 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 fibroblast fibroblast ADV RB _ _ _ _ _ 15 conditioned condition VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 medium medium ADJ JJ Degree=Pos _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 19 PGE2 Pge2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5165 # text = The nuclear factor kappaB (NF-kappaB) is thought to be crucially involved in the gene activation of several cytokines, including tumor necrosis factor alpha (TNF). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 crucially crucially ADV RB _ _ _ _ _ 15 involved involved ADJ JJ Degree=Pos _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 several several ADJ JJ Degree=Pos _ _ _ _ 22 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 including include VERB VBG VerbForm=Ger _ _ _ _ 25 tumor tumor NOUN NN Number=Sing _ _ _ _ 26 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ _ 28 alpha alpha NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 5166 # text = Previously, we showed that fibroblast conditioned medium (FCM) is able to inhibit both TNF mRNA accumulation and protein release in peripheral blood-derived human monocytes (PBM) stimulated with lipopolysaccharide (LPS). 1 Previously previously ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 fibroblast fibroblast ADV RB _ _ _ _ _ 7 conditioned condition VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 medium medium NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 FCM FCM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 able able ADJ JJ Degree=Pos _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 16 both both CCONJ CC _ _ _ _ _ 17 TNF TNF PROPN NNP Number=Sing _ _ _ _ 18 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 19 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ _ 22 release release NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 25 blood blood NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 PBM PBM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 5167 # text = In this study we have investigated the effect of FCM on the LPS-induced DNA-binding activity of NF-kappaB, by means of electrophoretic shift assay (EMSA). 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 effect effect NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 FCM FCM PROPN NNP Number=Sing _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 means means NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 29 shift shift NOUN NN Number=Sing _ _ _ _ 30 assay assay NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 EMSA EMSA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 5168 # text = We provide evidence that FCM strongly inhibits the LPS-induced NF-kappaB activation in PBM. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 evidence evidence NOUN NN Number=Sing _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 FCM FCM PROPN NNP Number=Sing _ _ _ _ 6 strongly strongly ADV RB _ _ _ _ _ 7 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 LPS Lps NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 PBM PBM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 5169 # text = Furthermore, we show that exogenous PGE2 mimics the NF-kappaB inhibitory effect of FCM. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 7 PGE2 PGE2 NOUN NN Number=Sing _ _ _ _ 8 mimics mimics NOUN NNS Number=Plur _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 14 effect effect NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 FCM FCM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 5170 # text = On the other hand, FCM produced in the presence of indomethacin does not inhibit NF-kappaB activation by LPS. 1 On on ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 hand hand NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 FCM FCm PROPN NNP Number=Sing _ _ _ _ 7 produced produce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 presence presence NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 indomethacin indomethacin NOUN NN Number=Sing _ _ _ _ 13 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5171 # text = Our results lend further support to the hypothesis that inflammatory and immune responses of monocytes/macrophages may be modulated at the molecular level by signals originating from tissue structural cells such as fibroblasts. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 lend lend VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 further further ADJ JJ Degree=Pos _ _ _ _ 5 support support NOUN NN Number=Sing _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 immune immune ADJ JJ Degree=Pos _ _ _ _ 13 responses response NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 / / PUNCT , _ _ _ _ SpaceAfter=No 17 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 18 may may AUX MD VerbForm=Fin _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 modulated modulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 at at ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 24 level level NOUN NN Number=Sing _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 signals signal NOUN NNS Number=Plur _ _ _ _ 27 originating originate VERB VBG VerbForm=Ger _ _ _ _ 28 from from ADP IN _ _ _ _ _ 29 tissue tissue NOUN NN Number=Sing _ _ _ _ 30 structural structural ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 such such ADJ JJ Degree=Pos _ _ _ _ 33 as as ADP IN _ _ _ _ _ 34 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5172 # text = Document 003001224 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001224 003001224 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5173 # text = Mitogen stimulation of T-cells increases c-Fos and c-Jun protein levels, AP-1 binding and AP-1 transcriptional activity. 1 Mitogen Mitogen ADJ JJ Degree=Pos _ _ _ _ 2 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 increases increase NOUN NNS Number=Plur _ _ _ _ 7 c- c- PUNCT : _ _ _ _ SpaceAfter=No 8 Fos Fo NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 Jun Jun PROPN NNP Number=Sing _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 binding binding NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5174 # text = We have analysed the effect of mitogenic lectins on c-Fos and c-Jun protein levels as well as on activator protein-1 (AP-1) binding and enhancer activity in Jurkat T-cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 analysed analyse VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 8 lectins lectin NOUN NNS Number=Plur _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 Fos Fo NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 Jun Jun PROPN NNP Number=Sing _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 levels level NOUN NNS Number=Plur _ _ _ _ 19 as as ADV RB _ _ _ _ _ 20 well well ADV RB Degree=Pos _ _ _ _ 21 as as ADP IN _ _ _ _ _ 22 on on ADP IN _ _ _ _ _ 23 activator activator NOUN NN Number=Sing _ _ _ _ 24 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 binding bind VERB VBG VerbForm=Ger _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 35 activity activity NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 38 T- T- PUNCT , _ _ _ _ SpaceAfter=No 39 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 5175 # text = Both c-Fos and c-Jun protein levels were increased after Con A and PHA stimulation. 1 Both both DET DT _ _ _ _ _ 2 c- c- SYM NFP _ _ _ _ SpaceAfter=No 3 Fos Fos NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 c class NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 Jun Jun PROPN NNP Number=Sing _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 levels level NOUN NNS Number=Plur _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 after after ADP IN _ _ _ _ _ 13 Con con NOUN NN Number=Sing _ _ _ _ 14 A a NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 PHA PHa DET DT Definite=Ind|PronType=Art _ _ _ _ 17 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 5176 # text = Since T-cell stimulation increases both intracellular Ca2+ and cAMP levels and activates protein kinase C (PKC), the possible involvement of these intracellular messengers in c-Fos and c-Jun induction was tested. 1 Since since ADP IN _ _ _ _ _ 2 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 5 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 both both DET DT _ _ _ _ _ 7 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 8 Ca2 ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 + + SYM SYM _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 cAMP camp NOUN NN Number=Sing _ _ _ _ 12 levels level NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 activates activate NOUN NNS Number=Plur _ _ _ _ 15 protein protein VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 kinase kinase NOUN NN Number=Sing _ _ _ _ 17 C C PROPN NNP Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 possible possible ADJ JJ Degree=Pos _ _ _ _ 24 involvement involvement NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 27 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 28 messengers messenger NOUN NNS Number=Plur _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 Fos Fos NOUN NNS Number=Plur _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 Jun Jun PROPN NNP Number=Sing _ _ _ _ 37 induction induction NOUN NN Number=Sing _ _ _ _ 38 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 39 tested test VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 5177 # text = PMA, which directly activates PKC, mimicked the effect of the lectins on c-Fos and c-Jun, but elevation of either intracellular Ca2+ or cAMP levels had little or no effect. 1 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 which which PRON WDT PronType=Rel _ _ _ _ 4 directly directly ADV RB _ _ _ _ _ 5 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 mimicked mimick VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 effect effect NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 lectins lectin NOUN NNS Number=Plur _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 Fos Fo NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 but but CCONJ CC _ _ _ _ _ 24 elevation elevation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 either either CCONJ CC _ _ _ _ _ 27 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 28 Ca2 ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 + + SYM SYM _ _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 cAMP camp NOUN NN Number=Sing _ _ _ _ 32 levels level NOUN NNS Number=Plur _ _ _ _ 33 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 little little ADJ JJ Degree=Pos _ _ _ _ 35 or or CCONJ CC _ _ _ _ _ 36 no no DET DT _ _ _ _ _ 37 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 5178 # text = The mitogen-induced increase of c-Fos and c-Jun immunoreactivity was inhibited by H-7, a kinase inhibitor with relatively high specificity for PKC, and less efficiently by H-8, a structurally related kinase inhibitor less active on PKC, but more active on cyclic nucleotide-dependent kinases. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 increase increase NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Fos Fo NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 Jun Jun PROPN NNP Number=Sing _ _ _ _ 14 immunoreactivity immunoreactivity NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 H H NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 kinase kinase NOUN NN Number=Sing _ _ _ _ 24 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 relatively relatively ADV RB _ _ _ _ _ 27 high high ADJ JJ Degree=Pos _ _ _ _ 28 specificity specificity NOUN NN Number=Sing _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 less less ADV RBR Degree=Cmp _ _ _ _ 34 efficiently efficiently ADV RB _ _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 H H PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT , _ _ _ _ SpaceAfter=No 38 8 8 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 41 structurally structurally ADV RB _ _ _ _ _ 42 related related ADJ JJ Degree=Pos _ _ _ _ 43 kinase kinase NOUN NN Number=Sing _ _ _ _ 44 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 45 less less ADV RBR Degree=Cmp _ _ _ _ 46 active active ADJ JJ Degree=Pos _ _ _ _ 47 on on ADP IN _ _ _ _ _ 48 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 but but CCONJ CC _ _ _ _ _ 51 more more ADV RBR _ _ _ _ _ 52 active active ADJ JJ Degree=Pos _ _ _ _ 53 on on ADP IN _ _ _ _ _ 54 cyclic cyclic ADJ JJ Degree=Pos _ _ _ _ 55 nucleotide nucleotide ADV RB _ _ _ _ SpaceAfter=No 56 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 57 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 58 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 5179 # text = Con A stimulation was found to increase both binding of AP-1 to the AP-1 consensus sequence, TRE, and AP-1 enhancer activity, in Jurkat cells. 1 Con con NOUN NN Number=Sing _ _ _ _ 2 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 increase increase VERB VB VerbForm=Inf _ _ _ _ 8 both both CCONJ CC _ _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 consensus consensus NOUN NN Number=Sing _ _ _ _ 20 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 TRE tre NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 29 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 5180 # text = PMA was also found to increase the AP-1 enhancer activity, whereas elevation of Ca2+ or cAMP had only minor effects. 1 PMA PMA PROPN NNP Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 increase increase VERB VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 whereas whereas SCONJ IN _ _ _ _ _ 15 elevation elevation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 + + SYM SYM _ _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 cAMP camp PROPN NNP Number=Sing _ _ _ _ 21 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 only only ADV RB _ _ _ _ _ 23 minor minor ADJ JJ Degree=Pos _ _ _ _ 24 effects effect NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5181 # text = We conclude that stimulation with mitogenic lectins is sufficient to increase both c-Fos and c-Jun protein levels, AP-1 binding and AP-1 enhancer activity in Jurkat cells and that they act via mechanisms that could involve the activation of PKC. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 7 lectins lectin NOUN NNS Number=Plur _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 increase increase VERB VB VerbForm=Inf _ _ _ _ 12 both both CCONJ CC _ _ _ _ _ 13 c- c- SYM SYM _ _ _ _ SpaceAfter=No 14 Fos Fo NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 Jun Jun PROPN NNP Number=Sing _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 binding binding NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 31 activity activity NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 that that SCONJ IN _ _ _ _ _ 37 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 38 act act VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 39 via via ADP IN _ _ _ _ _ 40 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 41 that that PRON WDT PronType=Rel _ _ _ _ 42 could could AUX MD VerbForm=Fin _ _ _ _ 43 involve involve VERB VB VerbForm=Inf _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 activation activation NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5182 # text = Document 003001229 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001229 003001229 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5183 # text = The human myelomonocytic cell line U-937 as a model for studying alterations in steroid-induced monokine gene expression: marked enhancement of lipopolysaccharide-stimulated interleukin-1 beta messenger RNA levels by 1,25-dihydroxyvitamin D3. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 myelomonocytic myelomonocytic ADJ JJ Degree=Pos _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 line line NOUN NN Number=Sing _ _ _ _ 6 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 937 937 NUM CD NumType=Card _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 model model NOUN NN Number=Sing _ _ _ _ 12 for for SCONJ IN _ _ _ _ _ 13 studying study VERB VBG VerbForm=Ger _ _ _ _ 14 alterations alteration NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 steroid steroid VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 monokine monokine NOUN NN Number=Sing _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 : : PUNCT : _ _ _ _ _ 23 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 beta beta NOUN NN Number=Sing _ _ _ _ 33 messenger messenger NOUN NN Number=Sing _ _ _ _ 34 RNA RNA NOUN NN Number=Sing _ _ _ _ 35 levels level NOUN NNS Number=Plur _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 dihydroxyvitamin dihydroxyvitamin NOUN NN Number=Sing _ _ _ _ 40 D3 D3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5184 # text = The active metabolite of vitamin D, 1,25-dihydroxyvitamin D3 [1,25-(OH)2D3], is a potent regulator of human monocyte/macrophage function in vitro. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 active active ADJ JJ Degree=Pos _ _ _ _ 3 metabolite metabolite NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 vitamin vitamin NOUN NN Number=Sing _ _ _ _ 6 D d NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 dihydroxyvitamin dihydroxyvitamin NOUN NN Number=Sing _ _ _ _ 11 D3 D3 NOUN NN Number=Sing _ _ _ _ 12 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 -( -( PUNCT . _ _ _ _ SpaceAfter=No 15 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 2D3 2D3 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 potent potent NOUN NN Number=Sing _ _ _ _ 23 regulator regulator NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 / / PUNCT , _ _ _ _ SpaceAfter=No 28 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 29 function function NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 5185 # text = To establish a model for 1,25-(OH)2D3 regulation of human monocyte monokine synthesis, three human cell lines (U-937, THP-1, and HL-60) were examined for: 1) the presence of functional 1,25-(OH)2D3 receptors; 2) the accumulation of interleukin-1 beta (IL-1 beta) mRNA and IL-1 beta protein in response to lipopolysaccharide (LPS); and 3) the regulation of this response by 1,25-(OH)2D3. 1 To to PART TO _ _ _ _ _ 2 establish establish VERB VB VerbForm=Inf _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 model model NOUN NN Number=Sing _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 -( -( PUNCT . _ _ _ _ SpaceAfter=No 8 OH oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 2D3 2D3 NUM CD NumType=Card _ _ _ _ 11 regulation regulation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 15 monokine monokine NOUN NN Number=Sing _ _ _ _ 16 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 three three NUM CD NumType=Card _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 lines line NOUN NNS Number=Plur _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 U u PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 937 937 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 HL Hl ADV RB _ _ _ _ SpaceAfter=No 33 - - SYM SYM _ _ _ _ SpaceAfter=No 34 60 60 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 37 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 for for ADP IN _ _ _ _ SpaceAfter=No 39 : : PUNCT : _ _ _ _ _ 40 1 1 X LS _ _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 presence presence NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 functional functional ADJ JJ Degree=Pos _ _ _ _ 46 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 47 -( -( PUNCT . _ _ _ _ SpaceAfter=No 48 OH oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 50 2D3 2D3 NUM CD NumType=Card _ _ _ _ 51 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 ; ; PUNCT , _ _ _ _ _ 53 2 2 X LS _ _ _ _ SpaceAfter=No 54 ) ) PUNCT -RRB- _ _ _ _ _ 55 the the DET DT Definite=Def|PronType=Art _ _ _ _ 56 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 57 of of ADP IN _ _ _ _ _ 58 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 - - PUNCT , _ _ _ _ SpaceAfter=No 60 1 1 NUM CD NumType=Card _ _ _ _ 61 beta beta NOUN NN Number=Sing _ _ _ _ 62 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 63 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 64 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 65 1 1 NUM CD NumType=Card _ _ _ _ 66 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 67 ) ) PUNCT -RRB- _ _ _ _ _ 68 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 69 and and CCONJ CC _ _ _ _ _ 70 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 71 - - PUNCT , _ _ _ _ SpaceAfter=No 72 1 1 NUM CD NumType=Card _ _ _ _ 73 beta beta NOUN NN Number=Sing _ _ _ _ 74 protein protein NOUN NN Number=Sing _ _ _ _ 75 in in ADP IN _ _ _ _ _ 76 response response NOUN NN Number=Sing _ _ _ _ 77 to to ADP IN _ _ _ _ _ 78 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 79 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 80 LPS Lp INTJ UH _ _ _ _ SpaceAfter=No 81 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 82 ; ; PUNCT , _ _ _ _ _ 83 and and CCONJ CC _ _ _ _ _ 84 3 3 X LS _ _ _ _ SpaceAfter=No 85 ) ) PUNCT -RRB- _ _ _ _ _ 86 the the DET DT Definite=Def|PronType=Art _ _ _ _ 87 regulation regulation NOUN NN Number=Sing _ _ _ _ 88 of of ADP IN _ _ _ _ _ 89 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 90 response response NOUN NN Number=Sing _ _ _ _ 91 by by ADP IN _ _ _ _ _ 92 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 93 - - PUNCT , _ _ _ _ SpaceAfter=No 94 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 95 OH oh INTJ UH _ _ _ _ SpaceAfter=No 96 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 97 2D3 2D3 NUM CD NumType=Card _ _ _ SpaceAfter=No 98 . . PUNCT . _ _ _ _ _ # sent_id = 5186 # text = All three cell lines expressed vitamin D receptor and had increased levels of IL-1 beta mRNA in response to LPS. 1 All all DET DT _ _ _ _ _ 2 three three NUM CD NumType=Card _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 lines line NOUN NNS Number=Plur _ _ _ _ 5 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 vitamin vitamin ADJ JJ Degree=Pos _ _ _ _ 7 D would NOUN NN Number=Sing _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 levels level NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 beta beta NOUN NN Number=Sing _ _ _ _ 18 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 response response NOUN NN Number=Sing _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 5187 # text = Preincubation of cells with 1,25-(OH)2D3 augmented IL-1 beta mRNA levels only in U-937 and HL-60 cells. 1 Preincubation Preincubation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 -( -( PUNCT . _ _ _ _ SpaceAfter=No 7 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 2D3 2D3 NUM CD NumType=Card _ _ _ _ 10 augmented augment VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 beta beta NOUN NN Number=Sing _ _ _ _ 15 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 16 levels level NOUN NNS Number=Plur _ _ _ _ 17 only only ADV RB _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 U u PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 937 937 NUM CD NumType=Card _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 HL Hl NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 60 60 NUM CD NumType=Card _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5188 # text = From these data, and taking into consideration their state of differentiation and relative ease of culture, U-937 was chosen over HL-60 and THP-1 as the cell line we further characterized. 1 From from ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 data data NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 taking take VERB VBG VerbForm=Ger _ _ _ _ 7 into into ADP IN _ _ _ _ _ 8 consideration consideration NOUN NN Number=Sing _ _ _ _ 9 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 10 state state NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 relative relative ADJ JJ Degree=Pos _ _ _ _ 15 ease ease NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 culture culture NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - SYM SYM _ _ _ _ SpaceAfter=No 21 937 937 NUM CD NumType=Card _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 chosen chosen VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 over over ADP IN _ _ _ _ _ 25 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 60 60 NUM CD NumType=Card _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 as as ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 line line NOUN NN Number=Sing _ _ _ _ 36 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 37 further further ADV RB _ _ _ _ _ 38 characterized characterize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 5189 # text = In U-937 cells, optimum time and dose of pretreatment with 1,25-(OH)2D3 were determined to be 12-24 h at a receptor saturating concentration of 1,25-(OH)2D3 (10 nM). 1 In in ADP IN _ _ _ _ _ 2 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 937 937 NUM CD NumType=Card _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 optimum optimum ADJ JJ Degree=Pos _ _ _ _ 8 time time NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 dose dose NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 pretreatment pretreatment NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 -( -( PUNCT . _ _ _ _ SpaceAfter=No 16 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 2D3 2D3 NUM CD NumType=Card _ _ _ _ 19 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 determined determine ADJ JJ Degree=Pos _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - SYM SYM _ _ _ _ SpaceAfter=No 25 24 24 NUM CD NumType=Card _ _ _ _ 26 h h NOUN NN Number=Sing _ _ _ _ 27 at at ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 receptor receptor NOUN NN Number=Sing _ _ _ _ 30 saturating saturat VERB VBG VerbForm=Ger _ _ _ _ 31 concentration concentration NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 -( -( PUNCT . _ _ _ _ SpaceAfter=No 35 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 2D3 2D3 NUM CD NumType=Card _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 10 10 NUM CD NumType=Card _ _ _ _ 40 nM nm NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 5190 # text = Preincubation of cells with 1,25-(OH)2D3 had no effect on the time course of IL-1 beta mRNA appearance in response to LPS. 1 Preincubation Preincubation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 -( -( PUNCT . _ _ _ _ SpaceAfter=No 7 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 2D3 2D3 NUM CD NumType=Card _ _ _ _ 10 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 no no DET DT _ _ _ _ _ 12 effect effect NOUN NN Number=Sing _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 time time NOUN NN Number=Sing _ _ _ _ 16 course course NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 beta beta NOUN NN Number=Sing _ _ _ _ 22 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 23 appearance appearance NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 response response NOUN NN Number=Sing _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5191 # text = However, exposure of U-937 cells to 1,25-(OH)2D3 increased by 200% the level of IL-1 beta mRNA detected and decreased by three orders of magnitude the concentration of LPS required to achieve steady state mRNA levels equivalent to those observed in U-937 cells not preincubated with the hormone.2+o 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 exposure exposure NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 937 937 NUM CD NumType=Card _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 -( -( PUNCT . _ _ _ _ SpaceAfter=No 12 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 2D3 2D3 NUM CD NumType=Card _ _ _ _ 15 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 200 200 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 % % SYM NN Number=Sing _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 level level NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 beta beta NOUN NN Number=Sing _ _ _ _ 26 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 27 detected detect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 three three NUM CD NumType=Card _ _ _ _ 32 orders order NOUN NNS Number=Plur _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 magnitude magnitude NOUN NN Number=Sing _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 concentration concentration NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 LPS Lp NOUN NNS Number=Plur _ _ _ _ 39 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 to to PART TO _ _ _ _ _ 41 achieve achieve VERB VB VerbForm=Inf _ _ _ _ 42 steady steady ADJ JJ Degree=Pos _ _ _ _ 43 state state NOUN NN Number=Sing _ _ _ _ 44 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 45 levels level NOUN NNS Number=Plur _ _ _ _ 46 equivalent equivalent ADJ JJ Degree=Pos _ _ _ _ 47 to to ADP IN _ _ _ _ _ 48 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 49 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 in in ADP IN _ _ _ _ _ 51 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT , _ _ _ _ SpaceAfter=No 53 937 937 NUM CD NumType=Card _ _ _ _ 54 cells cell NOUN NNS Number=Plur _ _ _ _ 55 not not PART RB _ _ _ _ _ 56 preincubated preincubate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 57 with with ADP IN _ _ _ _ _ 58 the the DET DT Definite=Def|PronType=Art _ _ _ _ 59 hormone.2+ hormone.2+ SYM SYM _ _ _ _ SpaceAfter=No 60 o of ADP IN Abbr=Yes _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5192 # text = Document 003001230 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001230 003001230 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5193 # text = Interferon-gamma potentiates the antiviral activity and the expression of interferon-stimulated genes induced by interferon-alpha in U937 cells. 1 Interferon Interferon PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 gamma gamma PROPN NNP Number=Sing _ _ _ _ 4 potentiates potentiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 antiviral antiviral ADJ JJ Degree=Pos _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ _ 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 alpha alpha NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 U937 U937 NUM CD NumType=Card _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5194 # text = Binding of type I interferon (IFN-alpha/beta) to specific receptors results in the rapid transcriptional activation, independent of protein synthesis, of IFN-alpha-stimulated genes (ISGs) in human fibroblasts and HeLa and Daudi cell lines. 1 Binding binding NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 type type NOUN NN Number=Sing _ _ _ _ 4 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 5 interferon interferon X FW Foreign=Yes _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 IFN Ifn ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 -alpha/beta -alpha/beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 specific specific ADJ JJ Degree=Pos _ _ _ _ 12 receptors receptor NOUN NNS Number=Plur _ _ _ _ 13 results result NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 independent independent ADJ JJ Degree=Pos _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 alpha- alpha- SYM NFP _ _ _ _ SpaceAfter=No 29 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 genes gene NOUN NNS Number=Plur _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 ISGs ISGs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 human human ADJ JJ Degree=Pos _ _ _ _ 36 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 Daudi Daudi PROPN NNP Number=Sing _ _ _ _ 41 cell cell NOUN NN Number=Sing _ _ _ _ 42 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 5195 # text = The binding of ISGF3 (IFN-stimulated gene factor 3) to the conserved IFN-stimulated response element (ISRE) results in transcriptional activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 binding binding NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 ISGF3 ISGF3 NUM CD NumType=Card _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 3 3 X LS _ _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 IFN IFN NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ _ 20 element element NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 ISRE ISRE NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 results result NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5196 # text = This factor is composed of a DNA-binding protein (ISGF3 gamma), which normally is present in the cytoplasm, and other IFN-alpha-activated proteins which preexist as latent cytoplasmic precursors (ISGF3 alpha). 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 ISGF3 ISGF3 NUM CD NumType=Card _ _ _ _ 13 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 normally normally ADV RB _ _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 present present ADJ JJ Degree=Pos _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 other other ADJ JJ Degree=Pos _ _ _ _ 26 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 proteins protein NOUN NNS Number=Plur _ _ _ _ 32 which which PRON WDT PronType=Rel _ _ _ _ 33 preexist preexist VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 as as ADP IN _ _ _ _ _ 35 latent latent ADJ JJ Degree=Pos _ _ _ _ 36 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 37 precursors precursor NOUN NNS Number=Plur _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 ISGF3 ISGF3 NUM CD NumType=Card _ _ _ _ 40 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 5197 # text = We have found that ISG expression in the monocytic U937 cell line differs from most cell lines previously examined. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 ISG ISG VERB VBG VerbForm=Ger _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 10 U937 U937 NOUN NN Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 line line NOUN NN Number=Sing _ _ _ _ 13 differs differ NOUN NNS Number=Plur _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 most most ADJ JJS Degree=Sup _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 lines line NOUN NNS Number=Plur _ _ _ _ 18 previously previously ADV RB _ _ _ _ _ 19 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 5198 # text = U937 cells express both type I and type II IFN receptors, but only IFN-alpha is capable of inducing antiviral protection in these cells. 1 U937 U937 NUM CD NumType=Card _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 express express ADJ JJ Degree=Pos _ _ _ _ 4 both both DET DT _ _ _ _ _ 5 type type NOUN NN Number=Sing _ _ _ _ 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 type type VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 II ii NUM CD NumType=Card _ _ _ _ 10 IFN Ifn NOUN NN Number=Sing _ _ _ _ 11 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 only only ADV RB _ _ _ _ _ 15 IFN Ifn ADV RB _ _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 alpha alpha NOUN NN Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 capable capable ADJ JJ Degree=Pos _ _ _ _ 20 of of SCONJ IN _ _ _ _ _ 21 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 22 antiviral antiviral ADJ JJ Degree=Pos _ _ _ _ 23 protection protection NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5199 # text = Pretreatment with IFN-gamma potentiates the IFN-alpha-induced protection, but IFN-gamma alone does not have any antiviral activity. 1 Pretreatment Pretreatment NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 gamma gamma PROPN NNP Number=Sing _ _ _ _ 6 potentiates potentiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 protection protection NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 IFN Ifn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 gamma gamma PROPN NNP Number=Sing _ _ _ _ 19 alone alone ADV RB _ _ _ _ _ 20 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 have have VERB VB VerbForm=Inf _ _ _ _ 23 any any DET DT _ _ _ _ _ 24 antiviral antiviral ADJ JJ Degree=Pos _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5200 # text = ISG15 mRNA accumulation in U937 cells is not detectable before 6 h of IFN-alpha treatment, peaks at 24 h, and requires protein synthesis. 1 ISG15 ISG15 NUM CD NumType=Card _ _ _ _ 2 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 3 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 U937 U937 NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 10 before before ADP IN _ _ _ _ _ 11 6 6 NUM CD NumType=Card _ _ _ _ 12 h h NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 IFN Ifn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 peaks peak NOUN NNS Number=Plur _ _ _ _ 20 at at ADP IN _ _ _ _ _ 21 24 24 NUM CD NumType=Card _ _ _ _ 22 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ _ 27 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5201 # text = Although IFN-gamma alone does not induce ISG expression, IFN-gamma pretreatment markedly increases and hastens ISG expression and transcriptional induction. 1 Although although SCONJ IN _ _ _ _ _ 2 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 gamma gamma NOUN NN Number=Sing _ _ _ _ 5 alone alone NOUN NN Number=Sing _ _ _ _ 6 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 induce induce VERB VB VerbForm=Inf _ _ _ _ 9 ISG ISG PROPN NNP Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 gamma gamma NOUN NN Number=Sing _ _ _ _ 15 pretreatment pretreatment NOUN NN Number=Sing _ _ _ _ 16 markedly markedly ADV RB _ _ _ _ _ 17 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 hastens hasten VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 ISG ISG ADJ JJ Degree=Pos _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 24 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5202 # text = Nuclear extracts assayed for the presence of ISRE binding factors by electrophoretic mobility shift assays show that ISGF3 is induced by IFN-alpha within 6 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 extracts extract NOUN NNS Number=Plur _ _ _ _ 3 assayed assay VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 presence presence NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 ISRE Isre PROPN NNP Number=Sing _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 13 mobility mobility NOUN NN Number=Sing _ _ _ _ 14 shift shift NOUN NN Number=Sing _ _ _ _ 15 assays assay NOUN NNS Number=Plur _ _ _ _ 16 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 ISGF3 ISGF3 NUM CD NumType=Card _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 alpha alpha ADV RB _ _ _ _ _ 25 within within ADP IN _ _ _ _ _ 26 6 6 NUM CD NumType=Card _ _ _ _ # sent_id = 5203 # text = h from undetectable basal levels in untreated U937 cells. 1 h h INTJ UH _ _ _ _ _ 2 from from ADP IN _ _ _ _ _ 3 undetectable undetectable ADJ JJ Degree=Pos _ _ _ _ 4 basal basal ADJ JJ Degree=Pos _ _ _ _ 5 levels level NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 untreated untreated ADJ JJ Degree=Pos _ _ _ _ 8 U937 U937 NUM CD NumType=Card _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 5204 # text = Activation of ISGF3 alpha, the latent component of ISGF3, occurs rapidly. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 ISGF3 ISGF3 NUM CD NumType=Card _ _ _ _ 4 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 latent latent ADJ JJ Degree=Pos _ _ _ _ 8 component component NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 ISGF3 ISGF3 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 occurs occurs ADV RB _ _ _ _ _ 13 rapidly rapidly ADV RB _ _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 5205 # text = However, the increase in ISGF3 activity ultimately correlates with the accumulation of ISGF3 gamma induced by IFN-alpha or IFN-gamma. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 increase increase NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 ISGF3 ISGF3 NUM CD NumType=Card _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 ultimately ultimately ADV RB _ _ _ _ _ 9 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 ISGF3 ISGF3 NUM CD NumType=Card _ _ _ _ 15 gamma gamma NOUN NN Number=Sing _ _ _ _ 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 alpha alpha PROPN NNP Number=Sing _ _ _ _ 21 or or CCONJ CC _ _ _ _ _ 22 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 gamma gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5206 # text = (ABSTRACT TRUNCATED AT 250 WORDS) 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 ABSTRACT ABSTRACT X GW _ _ _ _ _ 3 TRUNCATED Truncate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 AT at ADV RB _ _ _ _ _ 5 250 250 NUM CD NumType=Card _ _ _ _ 6 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5207 # text = Document 003001242 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001242 003001242 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5208 # text = Clone pAT 133 identifies a gene that encodes another human member of a class of growth factor-induced genes with almost identical zinc-finger domains. 1 Clone Clone PROPN NNP Number=Sing _ _ _ _ 2 pAT pAT PROPN NNP Number=Sing _ _ _ _ 3 133 133 NUM CD NumType=Card _ _ _ _ 4 identifies identify VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 another another DET DT _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 member member NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 class class NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 growth growth NOUN NN Number=Sing _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 -induced -induced VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 genes gene NOUN NNS Number=Plur _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 almost almost ADV RB _ _ _ _ _ 22 identical identical ADJ JJ Degree=Pos _ _ _ _ 23 zinc zinc NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 finger finger NOUN NN Number=Sing _ _ _ _ 26 domains domain NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5209 # text = We report the structure and regulation of a gene represented by clone pAT 133, which is induced upon transition from a resting state (G0) through the early phase of the cell cycle (G1). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 structure structure NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 regulation regulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 represented represent VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 clone clone NOUN NN Number=Sing _ _ _ _ 13 pAT pat NOUN NN Number=Sing _ _ _ _ 14 133 133 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 upon upon ADP IN _ _ _ _ _ 20 transition transition NOUN NN Number=Sing _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 resting resting VERB VBG VerbForm=Ger _ _ _ _ 24 state state NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 G0 G0 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 through through ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 early early ADJ JJ Degree=Pos _ _ _ _ 31 phase phase NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 cycle cycle NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 G1 G1 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 5210 # text = The pAT 133 gene is immediately induced, with FOS-like kinetics, in human T cells and in fibroblasts. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 pAT pat NOUN NN Number=Sing _ _ _ _ 3 133 133 NUM CD NumType=Card _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 immediately immediately ADV RB _ _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 FOS FOS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 like like ADJ JJ Degree=Pos _ _ _ _ 13 kinetics kinetic NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5211 # text = Primary structure analysis showed that the encoded protein contains three tandem zinc-finger sequences of the type Cys2-Xaa12-His2. 1 Primary primary ADJ JJ Degree=Pos _ _ _ _ 2 structure structure NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 three three NUM CD NumType=Card _ _ _ _ 11 tandem tandem NOUN NN Number=Sing _ _ _ _ 12 zinc zinc NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 finger finger NOUN NN Number=Sing _ _ _ _ 15 sequences sequence NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 type type NOUN NN Number=Sing _ _ _ _ 19 Cys2-Xaa12 Cys2-Xaa12 NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 His2 His2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5212 # text = This zinc-finger region, which is thought to bind DNA in a sequence-specific manner, is similar (greater than 80% on the amino acid level) to two previously described transcription factors pAT 225/EGR1 and pAT 591/EGR2. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 zinc zinc NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 finger finger NOUN NN Number=Sing _ _ _ _ 5 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 bind bind VERB VB VerbForm=Inf _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 similar similar ADJ JJ Degree=Pos _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 greater greater ADJ JJR Degree=Cmp _ _ _ _ 24 than than ADP IN _ _ _ _ _ 25 80 80 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 % % SYM NN Number=Sing _ _ _ _ 27 on on ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 amino amino DET DT _ _ _ _ _ 30 acid acid ADJ JJ Degree=Pos _ _ _ _ 31 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 two two NUM CD NumType=Card _ _ _ _ 35 previously previously ADV RB _ _ _ _ _ 36 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 transcription transcription NOUN NN Number=Sing _ _ _ _ 38 factors factor NOUN NNS Number=Plur _ _ _ _ 39 pAT pAT NOUN NN Number=Sing _ _ _ _ 40 225/ 225/ SYM SYM _ _ _ _ SpaceAfter=No 41 EGR1 EGR1 NUM CD NumType=Card _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 pAT pAT NOUN NN Number=Sing _ _ _ _ 44 591/ 591ith PUNCT HYPH _ _ _ _ SpaceAfter=No 45 EGR2 Egr2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 5213 # text = Except for the conserved zinc-finger domains, the amino acid sequences of the three proteins are distinct. 1 Except except ADP IN _ _ _ _ _ 2 for for ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 zinc zinc NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 finger finger NOUN NN Number=Sing _ _ _ _ 8 domains domain NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 amino amino ADJ JJ Degree=Pos _ _ _ _ 12 acid acid ADJ JJ Degree=Pos _ _ _ _ 13 sequences sequence NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 three three NUM CD NumType=Card _ _ _ _ 17 proteins protein NOUN NNS Number=Plur _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 distinct distinct ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 5214 # text = This structural similarity suggests that the pAT 133 gene encodes a transcription factor with a specific biological function. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 structural structural ADJ JJ Degree=Pos _ _ _ _ 3 similarity similarity NOUN NN Number=Sing _ _ _ _ 4 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 pAT pat NOUN NN Number=Sing _ _ _ _ 8 133 133 NUM CD NumType=Card _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 biological biological ADJ JJ Degree=Pos _ _ _ _ 18 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 5215 # text = Comparing the regulation of these related zinc-finger-encoding genes showed coordinate induction upon mitogenic stimulation of resting T lymphocytes and of resting fibroblasts. 1 Comparing compare VERB VBG VerbForm=Ger _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 regulation regulation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 related relate ADJ JJ Degree=Pos _ _ _ _ 7 zinc zinc NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 finger finger NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 -encoding -encoding NOUN NN Number=Sing _ _ _ _ 11 genes gene NOUN NNS Number=Plur _ _ _ _ 12 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 coordinate coordinate ADJ JJ Degree=Pos _ _ _ _ 14 induction induction NOUN NN Number=Sing _ _ _ _ 15 upon upon ADP IN _ _ _ _ _ 16 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 17 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 18 of of SCONJ IN _ _ _ _ _ 19 resting rest VERB VBG VerbForm=Ger _ _ _ _ 20 T T PROPN NNP Number=Sing _ _ _ _ 21 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 of of SCONJ IN _ _ _ _ _ 24 resting rest VERB VBG VerbForm=Ger _ _ _ _ 25 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5216 # text = However, upon transition from a proliferating (G1) to a resting state of the cell cycle the three genes were differently regulated. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 upon upon ADP IN _ _ _ _ _ 4 transition transition NOUN NN Number=Sing _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 proliferating proliferating NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 G1 G1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 resting reste VERB VBG VerbForm=Ger _ _ _ _ 14 state state NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 cycle cycle NOUN NN Number=Sing _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 three three NUM CD NumType=Card _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 differently differently ADV RB _ _ _ _ _ 24 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5217 # text = In human histiocytic U937 cells mRNA of clone pAT 133 was constitutively expressed, whereas mRNA of pAT 225/EGR1 was induced upon induction of terminal differentiation. 1 In in ADP IN _ _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 histiocytic histiocytic ADJ JJ Degree=Pos _ _ _ _ 4 U937 U937 NUM CD NumType=Card _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 mRNA mRNa ADP IN _ _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 clone clone NOUN NN Number=Sing _ _ _ _ 9 pAT pat NOUN NN Number=Sing _ _ _ _ 10 133 133 NUM CD NumType=Card _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 constitutively constitutively ADV RB _ _ _ _ _ 13 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 whereas whereas SCONJ IN _ _ _ _ _ 16 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 pAT pAT PROPN NNP Number=Sing _ _ _ _ 19 225/ 225/ PUNCT HYPH _ _ _ _ SpaceAfter=No 20 EGR1 EGR1 PROPN NNP Number=Sing _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 upon upon ADP IN _ _ _ _ _ 24 induction induction NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 27 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5218 # text = In contrast mRNA representing pAT 591/EGR2 was not expressed in these cells. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ _ 3 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 4 representing represent VERB VBG VerbForm=Ger _ _ _ _ 5 pAT pat NOUN NN Number=Sing _ _ _ _ 6 591/ 591/ PUNCT HYPH _ _ _ _ SpaceAfter=No 7 EGR2 Egr2 NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 5219 # text = This difference in gene regulation suggests distinct biological roles in the control of cell proliferation for the respective proteins. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 difference difference NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 gene gene ADJ JJ Degree=Pos _ _ _ _ 5 regulation regulation NOUN NN Number=Sing _ _ _ _ 6 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 8 biological biological ADJ JJ Degree=Pos _ _ _ _ 9 roles role NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 control control NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 respective respective ADJ JJ Degree=Pos _ _ _ _ 19 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5220 # text = Document 003001243 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001243 003001243 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5221 # text = Interferon-alpha activates multiple 1 Interferon Interferon PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 alpha alpha NOUN NN Number=Sing _ _ _ _ 4 activates activate NOUN NNS Number=Plur _ _ _ _ 5 multiple multiple ADJ JJ Degree=Pos _ _ _ _ # sent_id = 5222 # text = STAT proteins and upregulates proliferation-associated IL-2Ralpha, c-myc, and pim-1 genes in human T cells. 1 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 2 proteins protein NOUN NNS Number=Plur _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 upregulates upregulate NOUN NNS Number=Plur _ _ _ _ 5 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 Ralpha Ralpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 c- c- SYM NFP _ _ _ _ SpaceAfter=No 14 myc myc NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 pim pim NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 T T PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5223 # text = Interferon-alpha (IFN-alpha) is a pleiotropic cytokine that has antiviral, antiproliferative, and immunoregulatory functions. 1 Interferon Interferon PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 alpha alpha PROPN NNP Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 IFN Ifn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 alpha alpha X FW Foreign=Yes _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 pleiotropic pleiotropic ADJ JJ Degree=Pos _ _ _ _ 12 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 antiviral antiviral ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 antiproliferative antiproliferative ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 immunoregulatory immunoregulatory ADJ JJ Degree=Pos _ _ _ _ 21 functions function NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5224 # text = There is increasing evidence that IFN-alpha has an important role in T-cell biology. 1 There there PRON EX _ _ _ _ _ 2 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 4 evidence evidence NOUN NN Number=Sing _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 IFN Ifn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 alpha alpha NOUN NN Number=Sing _ _ _ _ 9 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 important important ADJ JJ Degree=Pos _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 biology biology NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 5225 # text = We have analyzed the expression of IL-2Ralpha, c-myc, and pim-1 genes in anti-CD3-activated human T lymphocytes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 Ralpha Ralpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 c-myc c-myc NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 pim pim NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 genes gene NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 -activated -activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 T t NOUN NN Number=Sing _ _ _ _ 24 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5226 # text = The induction of these genes is associated with interleukin-2 (IL-2)-induced T-cell proliferation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 genes gene NOUN NNS Number=Plur _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 -induced -induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5227 # text = Treatment of T lymphocytes with IFN-alpha, IL-2, IL-12, and IL-15 upregulated IL-2Ralpha, c-myc, and pim-1 gene expression. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 -12 -12 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 15 15 NUM CD NumType=Card _ _ _ _ 21 upregulated upregulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 Ralpha Ralpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 c-myc c-myc NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 pim pim NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 5228 # text = IFN-alpha also sensitized T cells to IL-2-induced proliferation, further suggesting that IFN-alpha may be involved in the regulation of T-cell mitogenesis. 1 IFN- IFN- SYM NFP _ _ _ _ SpaceAfter=No 2 alpha alpha NOUN NN Number=Sing _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 sensitized sensitize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 T t NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 further further ADV RB _ _ _ _ _ 16 suggesting suggesting VERB VBG VerbForm=Ger _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 alpha alpha PROPN NNP Number=Sing _ _ _ _ 21 may may AUX MD VerbForm=Fin _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 involved involved ADJ JJ Degree=Pos _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 regulation regulation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 mitogenesis mitogenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 5229 # text = When we analyzed the nature of STAT proteins capable of binding to IL-2Ralpha, pim-1, and IRF-1 GAS elements after cytokine stimulation, we observed IFN-alpha-induced binding of STAT1, STAT3, and STAT4, but not STAT5 to all of these elements. 1 When when ADV WRB PronType=Int _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 nature nature NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 STAT Stat NOUN NN Number=Sing _ _ _ _ 8 proteins protein NOUN NNS Number=Plur _ _ _ _ 9 capable capable ADJ JJ Degree=Pos _ _ _ _ 10 of of SCONJ IN _ _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 Ralpha Ralpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 pim pim NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 GAS gas NOUN NN Number=Sing _ _ _ _ 26 elements element NOUN NNS Number=Plur _ _ _ _ 27 after after ADP IN _ _ _ _ _ 28 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 29 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 32 observed observe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 IFN IFN NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 binding binding NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 STAT1 stat1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 STAT3 STAT3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 STAT4 STAT4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 but but CCONJ CC _ _ _ _ _ 48 not not ADV RB _ _ _ _ _ 49 STAT5 STAT5 NUM CD NumType=Card _ _ _ _ 50 to to ADP IN _ _ _ _ _ 51 all all DET DT _ _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 54 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 5230 # text = Yet, IFN-alpha was able to activate binding of STAT5 to the high-affinity IFP53 GAS site. 1 Yet yet CCONJ CC _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 alpha alpha NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 able able ADJ JJ Degree=Pos _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 activate activate VERB VB VerbForm=Inf _ _ _ _ 10 binding binding VERB VBG VerbForm=Ger _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 STAT5 STAT5 PROPN NNP Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 affinity affinity NOUN NN Number=Sing _ _ _ _ 18 IFP53 IFP53 NUM CD NumType=Card _ _ _ _ 19 GAS gas PROPN NNP Number=Sing _ _ _ _ 20 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5231 # text = IFN-alpha enhanced tyrosine phosphorylation of STAT1, STAT3, STAT4, STAT5a, and STAT5b. 1 IFN Ifn ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 alpha alpha X FW Foreign=Yes _ _ _ _ 4 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 6 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 STAT1 stat1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 STAT3 STAT3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 STAT4 STAT4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 STAT5a STAT5a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 STAT5 STAT5 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 b b NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 5232 # text = IL-12 induced STAT4 and IL-2 and IL-15 induced STAT5 binding to the GAS elements. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 12 12 NUM CD NumType=Card _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 STAT4 Stat4 PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 15 15 NUM CD NumType=Card _ _ _ _ 14 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 STAT5 stat5 PROPN NNP Number=Sing _ _ _ _ 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 GAS gas PROPN NNP Number=Sing _ _ _ _ 20 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5233 # text = Taken together, our results suggest that IFN-alpha, IL-2, IL-12, and IL-15 have overlapping activities on human T cells. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 IFN Ifn ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 IL il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 -12 -12 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - SYM SYM _ _ _ _ SpaceAfter=No 22 15 15 NUM CD NumType=Card _ _ _ _ 23 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 overlapping overlapp ADJ JJ Degree=Pos _ _ _ _ 25 activities activity NOUN NNS Number=Plur _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 human human ADJ JJ Degree=Pos _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5234 # text = These findings thus emphasize the importance of IFN-alpha as a T-cell regulatory cytokine. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 thus thus ADV RB _ _ _ _ _ 4 emphasize emphasize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 importance importance NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 16 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5235 # text = Document 003001246 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001246 003001246 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5236 # text = An alternatively spliced isoform of the Spi-B transcription factor. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 alternatively alternatively ADV RB _ _ _ _ _ 3 spliced spliced VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 isoform isoform NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 B B PROPN NNP Number=Sing _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5237 # text = Spi-B is an Ets transcription factor related to the oncoprotein Spi-1/PU.1 and highly expressed in B lymphoid cells. 1 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -B -B PROPN NNP Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 Ets Ets PROPN NNPS Number=Plur _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 related related ADJ JJ Degree=Pos _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 oncoprotein oncoprotein NOUN NN Number=Sing _ _ _ _ 12 Spi-1/ spi-1/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 highly highly ADV RB _ _ _ _ _ 16 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 B b ADJ JJ Degree=Pos _ _ _ _ 19 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5238 # text = The Ets proteins share a conserved Ets domain that mediates specific DNA binding. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Ets ets PROPN NNPS Number=Plur _ _ _ _ 3 proteins protein NOUN NNS Number=Plur _ _ _ _ 4 share share VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 Ets ets NOUN NNS Number=Plur _ _ _ _ 8 domain domain NOUN NN Number=Sing _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 specific specific ADJ JJ Degree=Pos _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 5239 # text = Spi-B binds DNA sequences containing a core 5'-GGAA-3' and activates transcription through this motif. 1 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -B -B PROPN NNP Number=Sing _ _ _ _ 3 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ _ 5 sequences sequence NOUN NNS Number=Plur _ _ _ _ 6 containing contain VERB VBG VerbForm=Ger _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 core core NOUN NN Number=Sing _ _ _ _ 9 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 GGAA GGAA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ' ' NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 activates activate NOUN NNS Number=Plur _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 through through ADP IN _ _ _ _ _ 20 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 21 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5240 # text = Up to date, the biological function of Spi-B remains unknown. 1 Up up ADP IN _ _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 date date NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 biological biological ADJ JJ Degree=Pos _ _ _ _ 7 function function NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 B b PROPN NNP Number=Sing _ _ _ _ 12 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 5241 # text = Here, we describe the characterization of an alternatively spliced variant of Spi-B, named deltaSpi-B, which has lost the Ets domain. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 describe describe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 characterization characterization NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 alternatively alternatively ADV RB _ _ _ _ _ 10 spliced spliced ADJ JJ Degree=Pos _ _ _ _ 11 variant variant NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 named name VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 deltaSpi deltaSpi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 -B -B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 lost lose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 Ets Et PROPN NNPS Number=Plur _ _ _ _ 26 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5242 # text = In B lymphoid cells, deltaspi-B and spi-B mRNAs were present simultaneously in a ratio of around 10%. 1 In in ADP IN _ _ _ _ _ 2 B b ADJ JJ Degree=Pos _ _ _ _ 3 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 deltaspi deltaspi ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 -B -b NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 spi spi X AFX _ _ _ _ SpaceAfter=No 10 -B -b ADJ JJ Degree=Pos _ _ _ _ 11 mRNAs mRNA NOUN NNS Number=Plur _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 present present ADJ JJ Degree=Pos _ _ _ _ 14 simultaneously simultaneously ADV RB _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 ratio ratio NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 around around ADV RB _ _ _ _ _ 20 10% 10% SYM NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5243 # text = DeltaSpi-B product was not able to bind DNA and was recovered in cytoplasmic cellular extracts. 1 DeltaSpi DeltaSpi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -B -b PROPN NNP Number=Sing _ _ _ _ 3 product product NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 able able ADJ JJ Degree=Pos _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 bind bind VERB VB VerbForm=Inf _ _ _ _ 9 DNA dna NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 recovered recover VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 15 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 16 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 5244 # text = We raise the hypothesis that delta Spi-B might affect Spi-B function by recruiting factors involved in Spi-B activity. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 raise raise VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 delta delta PROPN NNP Number=Sing _ _ _ _ 7 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 B b PROPN NNP Number=Sing _ _ _ _ 10 might might AUX MD VerbForm=Fin _ _ _ _ 11 affect affect VERB VB VerbForm=Inf _ _ _ _ 12 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 B b PROPN NNP Number=Sing _ _ _ _ 15 function function NOUN NN Number=Sing _ _ _ _ 16 by by SCONJ IN _ _ _ _ _ 17 recruiting recruite VERB VBG VerbForm=Ger _ _ _ _ 18 factors factor NOUN NNS Number=Plur _ _ _ _ 19 involved involve ADJ JJ Degree=Pos _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 B b ADJ JJ Degree=Pos _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5245 # text = Document 003001250 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001250 003001250 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5246 # text = ZAP-70 tyrosine kinase, CD45, and T cell receptor involvement in UV- and H2O2-induced T cell signal transduction. 1 ZAP Zap SYM NFP _ _ _ _ SpaceAfter=No 2 - - SYM SYM _ _ _ _ SpaceAfter=No 3 70 70 NUM CD NumType=Card _ _ _ _ 4 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 CD45 CD45 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 involvement involvement NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 UV UV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 H2O2 h2o2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 signal signal NOUN NN Number=Sing _ _ _ _ 24 transduction transduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5247 # text = Several mammalian responses to UV irradiation, including the activation of NF-kappa B, are believed to involve tyrosine phosphorylation. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 3 responses response NOUN NNS Number=Plur _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 UV UV PROPN NNP Number=Sing _ _ _ _ 6 irradiation irradiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 including include VERB VBG VerbForm=Ger _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa PROPN NNP Number=Sing _ _ _ _ 15 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 believed believe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 involve involve VERB VB VerbForm=Inf _ _ _ _ 21 tyrosine tyrosine PRON PRP _ _ _ _ _ 22 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 5248 # text = UV irradiation and H2O2 treatment of T lymphocytes induce protein tyrosine phosphorylation and Ca2+ signals similar to those observed following biological stimulation. 1 UV UV NOUN NN Number=Sing _ _ _ _ 2 irradiation irradiation NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 H2O2 H2O2 NUM CD NumType=Card _ _ _ _ 5 treatment treatment NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 9 induce induce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 12 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 + + SYM SYM _ _ _ _ _ 16 signals signal NOUN NNS Number=Plur _ _ _ _ 17 similar similar ADJ JJ Degree=Pos _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 20 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 following follow VERB VBG VerbForm=Ger _ _ _ _ 22 biological biological ADJ JJ Degree=Pos _ _ _ _ 23 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5249 # text = We have examined the role of cell surface molecules in these responses. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 surface surface NOUN NN Number=Sing _ _ _ _ 9 molecules molecule NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 12 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 5250 # text = Normal T lymphocytes whose surface expression of CD3 was depleted showed impaired UV-induced tyrosine phosphorylation and Ca2+ signals. 1 Normal normal PROPN NNP Number=Sing _ _ _ _ 2 T T PROPN NNP Number=Sing _ _ _ _ 3 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 4 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 5 surface surface VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 depleted deplet VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 showed show ADJ JJ Degree=Pos _ _ _ _ 12 impaired impaire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 UV UV NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 17 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 Ca2 ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 + + SYM SYM _ _ _ _ _ 21 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5251 # text = Similarly, Jurkat T cell lines deficient in CD3 or CD45 expression also gave impaired UV responses. 1 Similarly similarly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 4 T T PROPN NNP Number=Sing _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 lines line NOUN NNS Number=Plur _ _ _ _ 7 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 CD3 CD3 NUM CD NumType=Card _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 CD45 CD45 NUM CD NumType=Card _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 also also ADV RB _ _ _ _ _ 14 gave give VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 impaired impaired ADJ JJ Degree=Pos _ _ _ _ 16 UV uv NOUN NN Number=Sing _ _ _ _ 17 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 5252 # text = However, all these cell types still gave strong Ca2+ and tyrosine phosphorylation responses to H2O2. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 all all DET PDT _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 types type NOUN NNS Number=Plur _ _ _ _ 7 still still ADV RB _ _ _ _ _ 8 gave give VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 strong strong ADJ JJ Degree=Pos _ _ _ _ 10 Ca2 ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 + + SYM SYM _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 tyrosine tyrosine ADJ JJ Degree=Pos _ _ _ _ 14 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 15 responses response NOUN NNS Number=Plur _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 H2 H2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 O2 O2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 5253 # text = The T cell tyrosine kinase ZAP-70 was found to be highly responsive to UV and H2O2 treatment. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 T T PROPN NNP Number=Sing _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ _ 6 ZAP Zap NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 70 70 NUM CD NumType=Card _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 highly highly ADV RB _ _ _ _ _ 14 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 UV UV PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 H2O2 H2O2 NUM CD NumType=Card _ _ _ _ 19 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 5254 # text = ZAP-70 responsiveness to UV required expression of both CD3 and CD45, whereas only CD3 was required for the response to H2O2. 1 ZAP Zap SYM NFP _ _ _ _ SpaceAfter=No 2 - - SYM SYM _ _ _ _ SpaceAfter=No 3 70 70 NUM CD NumType=Card _ _ _ _ 4 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 UV UV PROPN NNP Number=Sing _ _ _ _ 7 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 both both DET DT _ _ _ _ _ 11 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 CD45 Cd45 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 whereas whereas SCONJ IN _ _ _ _ _ 16 only only ADV RB _ _ _ _ _ 17 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 response response NOUN NN Number=Sing _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 H2 H2 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 O2 O2 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5255 # text = UV-induced activation of NF-kappa B was blocked by CD3 depletion, indicating the importance of such cell surface molecules in biological responses to UV. 1 UV haUve PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B b PROPN NNP Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 CD3 CD3 NUM CD NumType=Card _ _ _ _ 14 depletion depletion NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 importance importance NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 such such ADJ JJ Degree=Pos _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 surface surface NOUN NN Number=Sing _ _ _ _ 23 molecules molecule NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 biological biological ADJ JJ Degree=Pos _ _ _ _ 26 responses response NOUN NNS Number=Plur _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 UV UV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5256 # text = In nonlymphoid cells, the epidermal growth factor receptor displayed increased tyrosine phosphorylation within seconds of UV irradiation. 1 In in ADP IN _ _ _ _ _ 2 nonlymphoid nonlymphoid ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 epidermal epidermal ADJ JJ Degree=Pos _ _ _ _ 7 growth growth NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ _ 10 displayed display VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 13 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 14 within within ADP IN _ _ _ _ _ 15 seconds seconds NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 UV UV PROPN NNP Number=Sing _ _ _ _ 18 irradiation irradiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 5257 # text = These results suggest that UV-induced signal transduction is mediated via cell surface receptors that normally respond to biological stimulation, whereas 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 UV uv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 signal signal NOUN NN Number=Sing _ _ _ _ 9 transduction transduction NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 via via ADP IN _ _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 surface surface NOUN NN Number=Sing _ _ _ _ 15 receptors receptor NOUN NNS Number=Plur _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 normally normally ADV RB _ _ _ _ _ 18 respond respond VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 biological biological ADJ JJ Degree=Pos _ _ _ _ 21 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 whereas wherea SCONJ IN _ _ _ _ _ # sent_id = 5258 # text = H2O2 is able to partially bypass this requirement. 1 H2O2 h2o2 NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 able able ADJ JJ Degree=Pos _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 partially partially ADV RB _ _ _ _ _ 6 bypass bypass VERB VB VerbForm=Inf _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 requirement requirement NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5259 # text = Document 003001256 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001256 003001256 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5260 # text = Bcl-2 protein inhibits bufalin-induced apoptosis through inhibition of mitogen-activated protein kinase activation in human leukemia U937 cells. 1 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 6 bufalin- bufalin- PUNCT : _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 apoptosis apoptosis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 9 through through ADP IN _ _ _ _ _ 10 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 kinase kinase NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 leukemia leukemion NOUN NN Number=Sing _ _ _ _ 21 U937 U937 NUM CD NumType=Card _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5261 # text = In a previous study, we demonstrated that bufalin, which is an active principle of Chinese medicine, chan'su, caused apoptosis in human leukemia U937 cells by anomalous activation of mitogen-activated protein kinase (MAPK) via the signaling pathway of Ras, Raf-1, and MAPK kinase-1. 1 In in ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 previous previous ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 9 bufalin bufalin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 active active ADJ JJ Degree=Pos _ _ _ _ 15 principle principle NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 Chinese chinese ADJ JJ Degree=Pos _ _ _ _ 18 medicine medicine NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 chan chan NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 'su 'su NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 apoptosis apoptosis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 leukemia leukemion NOUN NN Number=Sing _ _ _ _ 28 U937 U937 NUM CD NumType=Card _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 anomalous anomalous ADJ JJ Degree=Pos _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 mitogen mitogen NUM CD NumType=Card _ _ _ SpaceAfter=No 35 - - PUNCT : _ _ _ _ SpaceAfter=No 36 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 protein protein NOUN NN Number=Sing _ _ _ _ 38 kinase kinase NOUN NN Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 MAPK MAPK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 via via ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 signaling signaling NOUN NN Number=Sing _ _ _ _ 45 pathway pathway NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 Ras Ras PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 and and CCONJ CC _ _ _ _ _ 54 MAPK MAPK PROPN NNP Number=Sing _ _ _ _ 55 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 57 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 5262 # text = Here, we report the effect of overexpression of bcl-2 in U937 cells on the signaling pathway of apoptosis that is induced by bufalin. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 effect effect NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 U937 U937 NUM CD NumType=Card _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 signaling signal NOUN NN Number=Sing _ _ _ _ 19 pathway pathway NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 bufalin bufalin NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5263 # text = The results indicated that the apoptosis induced by bufalin in U937 cells was significantly inhibited by overexpression of the Bcl-2 protein. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 bufalin bufalin NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 U937 U937 NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 significantly significantly ADV RB _ _ _ _ _ 15 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5264 # text = No significant difference was detected in the activation of MAPK kinase-1 that is induced by bufalin in wild-type or Bcl-2-overexpressed 1 No no DET DT _ _ _ _ _ 2 significant significant ADJ JJ Degree=Pos _ _ _ _ 3 difference difference NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 MAPK MAPK PROPN NNP Number=Sing _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 bufalin bufalin NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 type type NOUN NN Number=Sing _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 Bcl Bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 overexpressed overexpress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ # sent_id = 5265 # text = U937 cells; however, the activation of MAPK by bufalin was significantly attenuated in the cells overexpressing Bcl-2. 1 U937 U937 NUM CD NumType=Card _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 ; ; PUNCT , _ _ _ _ _ 4 however however ADV RB _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 MAPK MAPK PROPN NNP Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 bufalin bufalin PROPN NNP Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 significantly significantly ADV RB _ _ _ _ _ 14 attenuated attenuate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 overexpressing overexpresse VERB VBG VerbForm=Ger _ _ _ _ 19 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5266 # text = Bufalin treatment activated activator protein-1 transcriptional activity; however, this activation was decreased to 40% in bcl-2-overexpressed U937 cells. 1 Bufalin Bufalin PROPN NNP Number=Sing _ _ _ _ 2 treatment treatment NOUN NN Number=Sing _ _ _ _ 3 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 activator activator NOUN NN Number=Sing _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ; ; PUNCT , _ _ _ _ _ 11 however however ADV RB _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 % % SYM NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 overexpressed overexpress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 U937 U937 NUM CD NumType=Card _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5267 # text = These results indicate that Bcl-2 acts downstream of MAPK kinase-1 but upstream of MAPK and suggest that, in the signaling pathway of the apoptotic process induced by bufalin, the transcriptional activity of activator protein-1 may be down-regulated through the inhibition of MAPK activity by Bcl-2. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 acts act NOUN NNS Number=Plur _ _ _ _ 9 downstream downstream NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 MAPK MAPK PROPN NNP Number=Sing _ _ _ _ 12 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 upstream upstream NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 MAPK MAPK PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 21 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 signaling signaling NOUN NN Number=Sing _ _ _ _ 26 pathway pathway NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 30 process process NOUN NN Number=Sing _ _ _ _ 31 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 bufalin bufalin NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 37 activity activity NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 activator activator NOUN NN Number=Sing _ _ _ _ 40 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT , _ _ _ _ SpaceAfter=No 42 1 1 NUM CD NumType=Card _ _ _ _ 43 may may AUX MD VerbForm=Fin _ _ _ _ 44 be be AUX VB VerbForm=Inf _ _ _ _ 45 down down ADV RB _ _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 48 through through ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 51 of of ADP IN _ _ _ _ _ 52 MAPK MAPK PROPN NNP Number=Sing _ _ _ _ 53 activity activity NOUN NN Number=Sing _ _ _ _ 54 by by ADP IN _ _ _ _ _ 55 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 56 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 57 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5268 # text = Document 003001257 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001257 003001257 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5269 # text = Activation of NF-kappaB in Mycobacterium tuberculosis- induced interleukin-2 receptor expression in mononuclear phagocytes. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 Mycobacterium Mycobacterium PROPN NNP Number=Sing _ _ _ _ 8 tuberculosis tuberculosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ _ 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 18 phagocytes phagocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5270 # text = Soluble interleukin-2 receptor-alpha (IL-2Ralpha) has been reported to be increased in the sera of patients with advanced tuberculosis, and levels decline after therapy in accordance with improvement of radiologic findings. 1 Soluble Soluble ADJ JJ Degree=Pos _ _ _ _ 2 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 Ralpha Ralpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 16 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 sera sera NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 patients patient NOUN NNS Number=Plur _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 advanced advanced ADJ JJ Degree=Pos _ _ _ _ 27 tuberculosis tuberculosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 levels level NOUN NNS Number=Plur _ _ _ _ 31 decline decline VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 32 after after ADP IN _ _ _ _ _ 33 therapy therapy NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 accordance accordance NOUN NN Number=Sing _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 improvement improvement NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 radiologic radiologic ADJ JJ Degree=Pos _ _ _ _ 40 findings finding NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 5271 # text = We investigated expression of the IL-2Ralpha in bronchoalveolar lavage (BAL) cells in active pulmonary tuberculosis, and evaluated the mechanism Mycobacterium tuberculosis induces in the IL-2Ralpha using the THP-1 mononuclear phagocyte cell line. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 Ralpha Ralpha PROPN NNP Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 bronchoalveolar bronchoalveolar ADJ JJ Degree=Pos _ _ _ _ 12 lavage lavage NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 BAL Bal NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 active active ADJ JJ Degree=Pos _ _ _ _ 19 pulmonary pulmonary NOUN NN Number=Sing _ _ _ _ 20 tuberculosis tuberculosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 evaluated evaluate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 26 Mycobacterium Mycobacterium NOUN NN Number=Sing _ _ _ _ 27 tuberculosis tuberculosis NOUN NN Number=Sing _ _ _ _ 28 induces induce NOUN NNS Number=Plur _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 Ralpha Ralpha PROPN NNP Number=Sing _ _ _ _ 35 using use VERB VBG VerbForm=Ger _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ _ 40 mononuclear mononuclear NOUN NN Number=Sing _ _ _ _ 41 phagocyte phagocyte NOUN NN Number=Sing _ _ _ _ 42 cell cell NOUN NN Number=Sing _ _ _ _ 43 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 5272 # text = We found IL-2Ralpha expression to be increased in BAL cells from involved sites of active pulmonary tuberculosis. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 Ralpha Ralpha PROPN NNP Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 BAL Bal ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 involved involved ADJ JJ Degree=Pos _ _ _ _ 16 sites site NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 active active ADJ JJ Degree=Pos _ _ _ _ 19 pulmonary pulmonary ADJ JJ Degree=Pos _ _ _ _ 20 tuberculosis tuberculosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5273 # text = Expression of the alpha-chain of IL-2Ralpha on peripheral blood monocytes (PBM) was induced by M. tuberculosis by flow cytometry evaluation. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 alpha- alpha- PUNCT : _ _ _ _ SpaceAfter=No 5 chain chain NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 Ralpha Ralpha NOUN NN Number=Sing _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 13 blood blood NOUN NN Number=Sing _ _ _ _ 14 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 PBM PBm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 M. M. PROPN NNP Number=Sing _ _ _ _ 22 tuberculosis tuberculosis NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 flow flow NOUN NN Number=Sing _ _ _ _ 25 cytometry cytometry NOUN NN Number=Sing _ _ _ _ 26 evaluation evaluation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5274 # text = Northern analysis demonstrated increased IL-2Ralpha gene expression after stimulation with M. 1 Northern northern ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 Ralpha Ralpha PROPN NNP Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 after after ADP IN _ _ _ _ _ 12 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 M. M. PROPN NNP Number=Sing _ _ _ _ # sent_id = 5275 # text = tuberculosis which was further induced by interferon-gamma (IFN-gamma). 1 tuberculosis tuberculosis NOUN NN Number=Sing _ _ _ _ 2 which which PRON WDT PronType=Rel _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 further further ADV RB _ _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 gamma gamma NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 5276 # text = The IL-2Ralpha promoter containing the nuclear factor kappa B (NF-kappaB) site was transcriptionally induced by M. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 Ralpha Ralpha PROPN NNP Number=Sing _ _ _ _ 6 promoter promoter NOUN NN Number=Sing _ _ _ _ 7 containing contain VERB VBG VerbForm=Ger _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b PROPN NNP Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 transcriptionally transcriptionally ADV RB _ _ _ _ _ 21 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 M. M. PROPN NNP Number=Sing _ _ _ _ # sent_id = 5277 # text = tuberculosis and this NF-kappaB site could confer inducibility to a heterologous herpes thymidine kinase (TK) promoter by M. 1 tuberculosis tuberculosis NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 7 site site NOUN NN Number=Sing _ _ _ _ 8 could could AUX MD VerbForm=Fin _ _ _ _ 9 confer confer VERB VB VerbForm=Inf _ _ _ _ 10 inducibility inducibility NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 14 herpes herpes NOUN NN Number=Sing _ _ _ _ 15 thymidine thymidine NOUN NN Number=Sing _ _ _ _ 16 kinase kinase NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 TK TK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 promoter promoter NOUN NN Number=Sing _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 M. M. PROPN NNP Number=Sing _ _ _ _ # sent_id = 5278 # text = tuberculosis. 1 tuberculosis tuberculosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ # sent_id = 5279 # text = Electrophoretic mobility shift assays (EMSAs) revealed specific binding of nuclear protein to the NF-kappaB site upon induction with M. tuberculosis. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assays assay NOUN NNS Number=Plur _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 EMSAs EMSAs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 binding binding NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 19 site site NOUN NN Number=Sing _ _ _ _ 20 upon upon ADP IN _ _ _ _ _ 21 induction induction NOUN NN Number=Sing _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 M. M. PROPN NNP Number=Sing _ _ _ _ 24 tuberculosis tuberculosis PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5280 # text = Using antibodies against the p50 and p65 subunits of NF-kappaB in EMSAs, the involvement of both p50 and p65 proteins was further demonstrated. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 3 against against ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 p50 p50 NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 p65 p65 NOUN NN Number=Sing _ _ _ _ 8 subunits subunit NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 EMSAs EMSAs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 involvement involvement NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 both both CCONJ CC _ _ _ _ _ 20 p50 p50 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 p65 p65 NUM CD NumType=Card _ _ _ _ 23 proteins protein NOUN NNS Number=Plur _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 further further ADV RB _ _ _ _ _ 26 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5281 # text = Functional expression of the IL-2Ralpha on mononuclear phagocytes in M. tuberculosis infection may play an important immunomodulatory role in the host response. 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 Ralpha Ralpha NOUN NN Number=Sing _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 11 phagocytes phagocyte NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 M. M. PROPN NNP Number=Sing _ _ _ _ 14 tuberculosis tuberculosis NOUN NN Number=Sing _ _ _ _ 15 infection infection NOUN NN Number=Sing _ _ _ _ 16 may may AUX MD VerbForm=Fin _ _ _ _ 17 play play VERB VB VerbForm=Inf _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 important important ADJ JJ Degree=Pos _ _ _ _ 20 immunomodulatory immunomodulatory ADJ JJ Degree=Pos _ _ _ _ 21 role role NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 host host NOUN NN Number=Sing _ _ _ _ 25 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5282 # text = Document 003001258 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001258 003001258 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5283 # text = Regulation of the beta-globin locus. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 globin globin NOUN NN Number=Sing _ _ _ _ 7 locus locus NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5284 # text = Transcription of the human beta-globin gene cluster depends upon upstream regulatory sequences, which are collectively termed the locus control region. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 globin globin NOUN NN Number=Sing _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 cluster cluster NOUN NN Number=Sing _ _ _ _ 10 depends depend VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 upon upon ADP IN _ _ _ _ _ 12 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 13 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 14 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 collectively collectively ADV RB _ _ _ _ _ 19 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 locus locus ADJ JJ Degree=Pos _ _ _ _ 22 control control NOUN NN Number=Sing _ _ _ _ 23 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5285 # text = Recent studies have provided new insights into how the individual genes of the cluster are regulated through development. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 provided provide VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 new new ADJ JJ Degree=Pos _ _ _ _ 6 insights insight NOUN NNS Number=Plur _ _ _ _ 7 into into SCONJ IN _ _ _ _ _ 8 how how ADV WRB PronType=Int _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 individual individual ADJ JJ Degree=Pos _ _ _ _ 11 genes gene NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 cluster cluster NOUN NN Number=Sing _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 through through ADP IN _ _ _ _ _ 18 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 5286 # text = The crux of transcriptional activation is how the locus control region communicates with the gene-proximal regulatory elements. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 crux crux NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 how how ADV WRB PronType=Int _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 locus locus ADJ JJ Degree=Pos _ _ _ _ 10 control control NOUN NN Number=Sing _ _ _ _ 11 region region NOUN NN Number=Sing _ _ _ _ 12 communicates communicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 gene- gene- SYM SYM _ _ _ _ SpaceAfter=No 16 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 17 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 18 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5287 # text = Document 003001268 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001268 003001268 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5288 # text = Induction of NF-KB during monocyte differentiation by HIV type 1 infection. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 KB KB PROPN NNP Number=Sing _ _ _ _ 6 during during ADP IN _ _ _ _ _ 7 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 8 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 HIV HIV PROPN NNP Number=Sing _ _ _ _ 11 type type NOUN NN Number=Sing _ _ _ _ 12 1 1 NUM CD NumType=Card _ _ _ _ 13 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5289 # text = The production of human immunodeficiency virus type 1 (HIV-1) progeny was followed in the U937 promonocytic cell line after stimulation either with retinoic acid or PMA, and in purified human monocytes and macrophages. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 production production NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 type type NOUN NN Number=Sing _ _ _ _ 8 1 1 NUM CD NumType=Card _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 progeny progeny NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 followed follow VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 U937 U937 NUM CD NumType=Card _ _ _ _ 20 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 line line NOUN NN Number=Sing _ _ _ _ 23 after after ADP IN _ _ _ _ _ 24 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 25 either either CCONJ CC _ _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 28 acid acid NOUN NN Number=Sing _ _ _ _ 29 or or CCONJ CC _ _ _ _ _ 30 PMA Pma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 human human ADJ JJ Degree=Pos _ _ _ _ 36 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 5290 # text = Electrophoretic mobility shift assays and Southwestern blotting experiments were used to detect the binding of cellular transactivation factor NF-KB to the double repeat-KB enhancer sequence located in the long terminal repeat. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assays assay NOUN NNS Number=Plur _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 Southwestern southwestern ADJ JJ Degree=Pos _ _ _ _ 7 blotting blotting ADJ JJ Degree=Pos _ _ _ _ 8 experiments experiment NOUN NNS Number=Plur _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 detect detect VERB VB VerbForm=Inf _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 binding binding NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 17 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 KB KB PROPN NNP Number=Sing _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 double double ADJ JJ Degree=Pos _ _ _ _ 25 repeat repeat VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 KB KB PROPN NNP Number=Sing _ _ _ _ 28 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 29 sequence sequence NOUN NN Number=Sing _ _ _ _ 30 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 long long ADJ JJ Degree=Pos _ _ _ _ 34 terminal terminal NOUN NN Number=Sing _ _ _ _ 35 repeat repeat VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 5291 # text = PMA treatment, and not retinoic acid treatment of the U937 cells acts in inducing NF-KB expression in the nuclei. 1 PMA PMA DET DT Definite=Ind|PronType=Art _ _ _ _ 2 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 not not ADV RB _ _ _ _ _ 6 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 7 acid acid ADJ JJ Degree=Pos _ _ _ _ 8 treatment treatment NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 U937 U937 NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 in in SCONJ IN _ _ _ _ _ 15 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 KB KB PROPN NNP Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 nuclei nuclei NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 5292 # text = In nuclear extracts from monocytes or macrophages, induction of NF-KB occurred only if the cells were previously infected with HIV-1. 1 In in ADP IN _ _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 extracts extract NOUN NNS Number=Plur _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 KB KB PROPN NNP Number=Sing _ _ _ _ 14 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 only only ADV RB _ _ _ _ _ 16 if if SCONJ IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 previously previously ADV RB _ _ _ _ _ 21 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5293 # text = When U937 cells were infected with HIV-1, no induction of NF-KB factor was detected, whereas high level of progeny virions was produced, suggesting that this factor was not required for viral replication. 1 When when ADV WRB PronType=Int _ _ _ _ 2 U937 U937 NUM CD NumType=Card _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 infected infect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 no no DET DT _ _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 KB KB PROPN NNP Number=Sing _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 whereas whereas SCONJ IN _ _ _ _ _ 22 high high ADJ JJ Degree=Pos _ _ _ _ 23 level level NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 progeny progeny NOUN NN Number=Sing _ _ _ _ 26 virions virion NOUN NNS Number=Plur _ _ _ _ 27 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 28 produced produce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 31 that that SCONJ IN _ _ _ _ _ 32 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 33 factor factor NOUN NN Number=Sing _ _ _ _ 34 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 35 not not PART RB _ _ _ _ _ 36 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 viral viral ADJ JJ Degree=Pos _ _ _ _ 39 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 5294 # text = These results indicate that in monocytic cell lineage, HIV-1 could mimic some differentiation/activation stimuli allowing nuclear NF-KB expression. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 could could AUX MD VerbForm=Fin _ _ _ _ 14 mimic mimic ADJ JJ Degree=Pos _ _ _ _ 15 some some DET DT _ _ _ _ _ 16 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 20 allowing allow VERB VBG VerbForm=Ger _ _ _ _ 21 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 KB KB PROPN NNP Number=Sing _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5295 # text = Document 003001281 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001281 003001281 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5296 # text = STAT1 activation during monocyte to macrophage maturation: role of adhesion molecules. 1 STAT1 STAT1 NUM CD NumType=Card _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 during during ADP IN _ _ _ _ _ 4 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 7 maturation maturation NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 : : PUNCT : _ _ _ _ _ 9 role role NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 12 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5297 # text = Human monocytes isolated from peripheral blood of healthy donors show a time-dependent differentiation into macrophages upon in vitro cultivation, closely mimicking their in vivo migration and maturation into extravascular tissues. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 3 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 6 blood blood NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 9 donors donor NOUN NNS Number=Plur _ _ _ _ 10 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 16 into into ADP IN _ _ _ _ _ 17 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 18 upon upon ADP IN _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 vitro vitro NOUN NN Number=Sing _ _ _ _ 21 cultivation cultivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 closely closely ADV RB _ _ _ _ _ 24 mimicking mimick VERB VBG VerbForm=Ger _ _ _ _ 25 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 vivo vivo NOUN NN Number=Sing _ _ _ _ 28 migration migration NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 maturation maturation NOUN NN Number=Sing _ _ _ _ 31 into into ADP IN _ _ _ _ _ 32 extravascular extravascular ADJ JJ Degree=Pos _ _ _ _ 33 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 5298 # text = The mediator(s) of this maturation process has not been yet defined. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mediator mediator NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 s s X AFX _ _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 maturation maturation NOUN NN Number=Sing _ _ _ _ 9 process process NOUN NN Number=Sing _ _ _ _ 10 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 13 yet yet ADV RB _ _ _ _ _ 14 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 5299 # text = We investigated the involvement of signal transducers and activators of transcription (STAT) factors in this phenomenon and reported the specific, time-dependent, activation of STAT1 protein starting at day 0/1 of cultivation and maximally expressed at day 5. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 involvement involvement NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 signal signal ADJ JJ Degree=Pos _ _ _ _ 7 transducers transducer NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 activators activator NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 STAT Stat NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 18 phenomenon phenomenon NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 STAT1 STAT1 NUM CD NumType=Card _ _ _ _ 31 protein protein NOUN NN Number=Sing _ _ _ _ 32 starting start VERB VBG VerbForm=Ger _ _ _ _ 33 at at ADP IN _ _ _ _ _ 34 day day NOUN NN Number=Sing _ _ _ _ 35 0/1 0/1 NUM CD NumType=Card _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 cultivation cultivation NOUN NN Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 maximally maximally ADV RB _ _ _ _ _ 40 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 at at ADP IN _ _ _ _ _ 42 day day NOUN NN Number=Sing _ _ _ _ 43 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 5300 # text = STAT1 activity was evident on the STAT binding sequences (SBE) present in the promoters of genes which are up-regulated during monocyte to macrophage maturation such as FcgammaRI and ICAM-1, and in the promoter of the transcription factor IFN regulatory factor-1. 1 STAT1 stat1 NUM CD NumType=Card _ _ _ _ 2 activity activity NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 evident evident ADJ JJ Degree=Pos _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 STAT Stat NOUN NN Number=Sing _ _ _ _ 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 sequences sequence NOUN NNS Number=Plur _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 SBE SBE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 present present ADJ JJ Degree=Pos _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 promoters promoter NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 genes gene NOUN NNS Number=Plur _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 up up ADV RB _ _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 during during ADP IN _ _ _ _ _ 25 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 macrophage macrophage VERB VB VerbForm=Inf _ _ _ _ 28 maturation maturation NOUN NN Number=Sing _ _ _ _ 29 such such ADJ JJ Degree=Pos _ _ _ _ 30 as as ADP IN _ _ _ _ _ 31 FcgammaRI Fcgammari PROPN NNP Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 ICAM ICAm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT , _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 promoter promoter NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 transcription transcription NOUN NN Number=Sing _ _ _ _ 44 factor factor NOUN NN Number=Sing _ _ _ _ 45 IFN Ifn ADP IN _ _ _ _ _ 46 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 47 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 5301 # text = Moreover, the effect of cell adhesion to fibronectin or laminin was studied to investigate mechanisms involved in STAT1 activation. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effect effect NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 fibronectin fibronectin NOUN NN Number=Sing _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 laminin laminin NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 16 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 17 involved involved ADJ JJ Degree=Pos _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 STAT1 stat1 NUM CD NumType=Card _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5302 # text = Compared with monocytes adherent on plastic surfaces, freshly isolated cells allowed to adhere either to fibronectin- or laminin-coated flasks exhibited an increased STAT1 binding activity both in control and in IFN-gamma-treated cells. 1 Compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 4 adherent adherent ADJ JJ Degree=Pos _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 plastic plastic ADJ JJ Degree=Pos _ _ _ _ 7 surfaces surface NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 freshly freshly ADV RB _ _ _ _ _ 10 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 allowed allow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 adhere adhere VERB VB VerbForm=Inf _ _ _ _ 15 either either ADV RB _ _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 fibronectin fibronectin VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 laminin laminin NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 coated coate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 flasks flask NOUN NNS Number=Plur _ _ _ _ 24 exhibited exhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 STAT1 stat1 NOUN NN Number=Sing _ _ _ _ 28 binding binde VERB VBG VerbForm=Ger _ _ _ _ 29 activity activity NOUN NN Number=Sing _ _ _ _ 30 both both CCONJ CC _ _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 control control NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 IFN- Ifn- NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 5303 # text = The molecular events leading to enhanced STAT1 activation and cytokine responsiveness concerned both Y701 and S727 STAT1 phosphorylation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 3 events event NOUN NNS Number=Plur _ _ _ _ 4 leading lead VERB VBG VerbForm=Ger _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 enhanced enhance VERB VB VerbForm=Inf _ _ _ _ 7 STAT1 stat1 NUM CD NumType=Card _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 11 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 12 concerned concern ADJ JJ Degree=Pos _ _ _ _ 13 both both CCONJ CC _ _ _ _ _ 14 Y701 Y701 PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 S727 S727 NUM CD NumType=Card _ _ _ _ 17 STAT1 STAT1 NOUN NN Number=Sing _ _ _ _ 18 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 5304 # text = Exogenous addition of transforming growth factor-beta, which exerts an inhibitory effect on some monocytic differentiation markers, inhibited macrophage maturation, integrin expression and STAT1 binding activity. 1 Exogenous Exogenous ADJ JJ Degree=Pos _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 of of SCONJ IN _ _ _ _ _ 4 transforming transforming VERB VBG VerbForm=Ger _ _ _ _ 5 growth growth NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 which which PRON WDT PronType=Rel _ _ _ _ 11 exerts exert VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 14 effect effect NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 some some DET DT _ _ _ _ _ 17 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 18 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 19 markers marker NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 23 maturation maturation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 integrin integrin ADJ JJ Degree=Pos _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 STAT1 stat1 PROPN NNP Number=Sing _ _ _ _ 29 binding binde VERB VBG VerbForm=Ger _ _ _ _ 30 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 5305 # text = Taken together these results indicate that STAT1 plays a pivotal role in the differentiation/maturation process of monocytes as an early transcription factor initially activated by adherence and then able to modulate the expression of functional genes, such as ICAM-1 and FcgammaRI. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 STAT1 STAT1 PROPN NNP Number=Sing _ _ _ _ 8 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 pivotal pivotal ADJ JJ Degree=Pos _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 maturation maturation NOUN NN Number=Sing _ _ _ _ 17 process process NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 early early ADJ JJ Degree=Pos _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 initially initially ADV RB _ _ _ _ _ 26 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 adherence adherence NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 then then ADV RB PronType=Dem _ _ _ _ 31 able able ADJ JJ Degree=Pos _ _ _ _ 32 to to PART TO _ _ _ _ _ 33 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 functional functional ADJ JJ Degree=Pos _ _ _ _ 38 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 such such ADJ JJ Degree=Pos _ _ _ _ 41 as as ADP IN _ _ _ _ _ 42 ICAM ICAm NUM CD NumType=Card _ _ _ SpaceAfter=No 43 - - SYM SYM _ _ _ _ SpaceAfter=No 44 1 1 NUM CD NumType=Card _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 FcgammaRI FcgammaRI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5306 # text = Document 003001285 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001285 003001285 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5307 # text = Quantification of vitamin D receptor mRNA by competitive polymerase chain reaction in PBMC: lack of correspondence with common allelic variants. 1 Quantification Quantification NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 vitamin vitamin ADJ JJ Degree=Pos _ _ _ _ 4 D would NOUN NN Number=Sing _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ _ 6 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 competitive competitive ADJ JJ Degree=Pos _ _ _ _ 9 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 10 chain chain NOUN NN Number=Sing _ _ _ _ 11 reaction reaction NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 PBMC PBMC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 : : PUNCT : _ _ _ _ _ 15 lack lack NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 correspondence correspondence NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 common common ADJ JJ Degree=Pos _ _ _ _ 20 allelic allelic ADJ JJ Degree=Pos _ _ _ _ 21 variants variant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5308 # text = It has been recently claimed that polymorphism for the vitamin D receptor (VDR) influences several aspects of calcium and bone metabolism. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 4 recently recently ADV RB _ _ _ _ _ 5 claimed claim VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 polymorphism polymorphism NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 vitamin vitamin ADJ JJ Degree=Pos _ _ _ _ 11 D d NOUN NN Number=Sing _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 VDR VDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 influences influence VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 several several ADJ JJ Degree=Pos _ _ _ _ 18 aspects aspect NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 calcium calcium NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 bone bone NOUN NN Number=Sing _ _ _ _ 23 metabolism metabolism NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5309 # text = To evaluate the physiologic plausibility of these claims, we compared the abundance of the VDR mRNA in peripheral blood mononuclear cells (PBMCs) between different VDR genotypes using a quantitative reverse transcribed polymerase chain reaction-based method. 1 To to PART TO _ _ _ _ _ 2 evaluate evaluate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 physiologic physiologic NOUN NN Number=Sing _ _ _ _ 5 plausibility plausibility NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 claims claim NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 compared compare VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 abundance abundance NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 VDR VDR PROPN NNP Number=Sing _ _ _ _ 17 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 20 blood blood NOUN NN Number=Sing _ _ _ _ 21 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 PBMCs Pbmcs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 between between ADP IN _ _ _ _ _ 27 different different ADJ JJ Degree=Pos _ _ _ _ 28 VDR Vdr NOUN NN Number=Sing _ _ _ _ 29 genotypes genotype NOUN NNS Number=Plur _ _ _ _ 30 using use VERB VBG VerbForm=Ger _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 quantitative quantitative ADJ JJ Degree=Pos _ _ _ _ 33 reverse reverse NOUN NN Number=Sing _ _ _ _ 34 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 36 chain chain NOUN NN Number=Sing _ _ _ _ 37 reaction reaction NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 method method NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 5310 # text = The method is based on the coamplification of VDR cDNA and an internal standard consisting of known concentrations of a human VDR CDNA mutated at a BglII restriction site; the interassay coefficient of variation is 11%. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 method method NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 coamplification coamplification NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 VDR VDR PROPN NNP Number=Sing _ _ _ _ 10 cDNA cDNA PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 internal internal ADJ JJ Degree=Pos _ _ _ _ 14 standard standard NOUN NN Number=Sing _ _ _ _ 15 consisting consisting VERB VBG VerbForm=Ger _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 known known VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 VDR VDR PROPN NNP Number=Sing _ _ _ _ 23 CDNA CDNA PROPN NNP Number=Sing _ _ _ _ 24 mutated mutate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 at at ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 BglII Bglii PROPN NNP Number=Sing _ _ _ _ 28 restriction restriction NOUN NN Number=Sing _ _ _ _ 29 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ; ; PUNCT , _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 interassay interassay ADJ JJ Degree=Pos _ _ _ _ 33 coefficient coefficient NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 variation variation NOUN NN Number=Sing _ _ _ _ 36 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 11% 11% SYM NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 5311 # text = To validate the method, we made use of earlier receptor binding studies indicating that normal human monocytes and activated, but not resting, lymphocytes expressed the VDR. 1 To to PART TO _ _ _ _ _ 2 validate validate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 method method NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 made make VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 use use NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 earlier earlier ADJ JJR Degree=Cmp _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 binding bind VERB VBG VerbForm=Ger _ _ _ _ 13 studies study NOUN NNS Number=Plur _ _ _ _ 14 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 normal normal ADJ JJ Degree=Pos _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 not not ADV RB _ _ _ _ _ 24 resting rest VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 27 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 VDR Vdr NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5312 # text = The concentration of the VDR mRNA was 10(-8) to 10(-7) g/g of total RNA in cell-sorted monocytes and in in vitro activated lymphocytes, but only 10(-12) g/g of total mRNA in resting lymphocytes, establishing that the VDR mRNA determined by our method in PBMCs is due to constitutive expression in monocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 concentration concentration NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 VDR VDR PROPN NNP Number=Sing _ _ _ _ 6 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 (- (- PUNCT . _ _ _ _ SpaceAfter=No 10 8 8 X LS _ _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 (- (- PUNCT . _ _ _ _ SpaceAfter=No 15 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 g/g g/g NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 total total ADJ JJ Degree=Pos _ _ _ _ 20 RNA RNA PROPN NNP Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 cell cell PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 sorted sort VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 vitro vitro NOUN NN Number=Sing _ _ _ _ 30 activated activated VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 but but CCONJ CC _ _ _ _ _ 34 only only ADV RB _ _ _ _ _ 35 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 (- (- PUNCT . _ _ _ _ SpaceAfter=No 37 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 g/g g/g NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 total total ADJ JJ Degree=Pos _ _ _ _ 42 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 43 in in SCONJ IN _ _ _ _ _ 44 resting reste VERB VBG VerbForm=Ger _ _ _ _ 45 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 establishing establish VERB VBG VerbForm=Ger _ _ _ _ 48 that that SCONJ IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 VDR VDR PROPN NNP Number=Sing _ _ _ _ 51 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 52 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 53 by by ADP IN _ _ _ _ _ 54 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 55 method method NOUN NN Number=Sing _ _ _ _ 56 in in ADP IN _ _ _ _ _ 57 PBMCs PBMC PROPN NNP Number=Sing _ _ _ _ 58 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 59 due due ADP IN _ _ _ _ _ 60 to to ADP IN _ _ _ _ _ 61 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 62 expression expression NOUN NN Number=Sing _ _ _ _ 63 in in ADP IN _ _ _ _ _ 64 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 65 . . PUNCT . _ _ _ _ _ # sent_id = 5313 # text = Following an initial genotype screening of 85 normal volunteers by polymerase chain reaction or restriction fragment length polymorphism analysis, 14 individuals with the Bb genotype, 12 with the bb genotype, and 12 with the BB genotype were selected. 1 Following follow VERB VBG VerbForm=Ger _ _ _ _ 2 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 initial initial ADJ JJ Degree=Pos _ _ _ _ 4 genotype genotype NOUN NN Number=Sing _ _ _ _ 5 screening screening NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 85 85 NUM CD NumType=Card _ _ _ _ 8 normal normal ADJ JJ Degree=Pos _ _ _ _ 9 volunteers volunteer NOUN NNS Number=Plur _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 12 chain chain NOUN NN Number=Sing _ _ _ _ 13 reaction reaction NOUN NN Number=Sing _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 restriction restriction NOUN NN Number=Sing _ _ _ _ 16 fragment fragment NOUN NN Number=Sing _ _ _ _ 17 length length NOUN NN Number=Sing _ _ _ _ 18 polymorphism polymorphism NOUN NN Number=Sing _ _ _ _ 19 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 14 14 NUM CD NumType=Card _ _ _ _ 22 individuals individual NOUN NNS Number=Plur _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 Bb Bb PROPN NNP Number=Sing _ _ _ _ 26 genotype genotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 12 12 NUM CD NumType=Card _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 bb bb NOUN NN Number=Sing _ _ _ _ 32 genotype genotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 12 12 NUM CD NumType=Card _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 BB BB PROPN NNP Number=Sing _ _ _ _ 39 genotype genotype NOUN NN Number=Sing _ _ _ _ 40 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 41 selected select VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 5314 # text = The concentration of the VDR mRNA, corrected for the number of monocytes, was similar among the three genotype groups, as were the other variables examined: serum calcitriol, serum osteocalcin, and vertebral and hip bone density. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 concentration concentration NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 VDR VDR PROPN NNP Number=Sing _ _ _ _ 6 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 corrected correct VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 number number NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 similar similar ADJ JJ Degree=Pos _ _ _ _ 17 among among ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 three three NUM CD NumType=Card _ _ _ _ 20 genotype genotype NOUN NN Number=Sing _ _ _ _ 21 groups group NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 as as SCONJ IN _ _ _ _ _ 24 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 other other ADJ JJ Degree=Pos _ _ _ _ 27 variables variable NOUN NNS Number=Plur _ _ _ _ 28 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 29 : : PUNCT : _ _ _ _ _ 30 serum serum NOUN NN Number=Sing _ _ _ _ 31 calcitriol calcitriol NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 serum serum NOUN NN Number=Sing _ _ _ _ 34 osteocalcin osteocalcin NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 vertebral vertebral ADJ JJ Degree=Pos _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 hip hip ADJ JJ Degree=Pos _ _ _ _ 40 bone bone NOUN NN Number=Sing _ _ _ _ 41 density density NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 5315 # text = We conclude that VDR polymorphism does not affect the abundance of the VDR mRNA. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 VDR VDR PROPN NNP Number=Sing _ _ _ _ 5 polymorphism polymorphism NOUN NN Number=Sing _ _ _ _ 6 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 affect affect VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 abundance abundance NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 VDR VDR PROPN NNP Number=Sing _ _ _ _ 14 mRNA. mRNA. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5316 # text = Document 003001286 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001286 003001286 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5317 # text = Nuclear localization and formation of beta-catenin-lymphoid enhancer factor 1 complexes are not sufficient for activation of gene expression. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 localization localization NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 formation formation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 beta-catenin beta-catenin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 9 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 1 1 NUM CD NumType=Card _ _ _ _ 12 complexes complexe NOUN NNS Number=Plur _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 gene gene ADJ JJ Degree=Pos _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5318 # text = In response to activation of the Wnt signaling pathway, beta-catenin accumulates in the nucleus, where it cooperates with LEF/TCF (for lymphoid enhancer factor and T-cell factor) transcription factors to activate gene expression. 1 In in ADP IN _ _ _ _ _ 2 response response NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 Wnt Wnt PROPN NNP Number=Sing _ _ _ _ 8 signaling signaling NOUN NN Number=Sing _ _ _ _ 9 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 catenin catenin NOUN NN Number=Sing _ _ _ _ 14 accumulates accumulate NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 where where ADV WRB PronType=Rel _ _ _ _ 20 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 21 cooperates cooperate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 LEF LEF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 / / PUNCT , _ _ _ _ SpaceAfter=No 25 TCF TCF PROPN NNP Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 for for ADP IN _ _ _ _ _ 28 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 29 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 cell cell NOUN NN Number=Sing _ _ _ _ 34 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 transcription transcription NOUN NN Number=Sing _ _ _ _ 37 factors factor NOUN NNS Number=Plur _ _ _ _ 38 to to PART TO _ _ _ _ _ 39 activate activate VERB VB VerbForm=Inf _ _ _ _ 40 gene gene NOUN NN Number=Sing _ _ _ _ 41 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 5319 # text = The mechanisms by which beta-catenin undergoes this shift in location and participates in activation of gene transcription are unknown. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 which which DET WDT PronType=Int _ _ _ _ 5 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 catenin catenin NOUN NN Number=Sing _ _ _ _ 8 undergoes undergo AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 10 shift shift NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 location location NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 participates participate NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5320 # text = We demonstrate here that beta-catenin can be imported into the nucleus independently of LEF/TCF binding, and it may also be exported from nuclei. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 catenin catenin NOUN NN Number=Sing _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 imported import VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 into into ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 14 independently independently ADV RB _ _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 LEF LEF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 TCF TCF PROPN NNP Number=Sing _ _ _ _ 19 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 23 may may AUX MD VerbForm=Fin _ _ _ _ 24 also also ADV RB _ _ _ _ _ 25 be be AUX VB VerbForm=Inf _ _ _ _ 26 exported export VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 nuclei nuclei NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5321 # text = We have introduced a small deletion within beta-catenin (Delta19) that disrupts binding to LEF-1, E-cadherin, and APC but not axin. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 introduced introduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 small small ADJ JJ Degree=Pos _ _ _ _ 6 deletion deletion NOUN NN Number=Sing _ _ _ _ 7 within within ADP IN _ _ _ _ _ 8 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 catenin catenin NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 Delta19 Delta19 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 disrupts disrupt VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 LEF LEF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 E- E- NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 cadherin cadherin NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 APC APC PROPN NNP Number=Sing _ _ _ _ 27 but but CCONJ CC _ _ _ _ _ 28 not not ADV RB _ _ _ _ _ 29 axin axin ADV RB _ _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5322 # text = This Delta19 beta-catenin mutant localizes to the nucleus because it may not be efficiently sequestered in the cytoplasm. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 Delta19 Delta19 PROPN NNP Number=Sing _ _ _ _ 3 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 catenin catenin NOUN NN Number=Sing _ _ _ _ 6 mutant mutant NOUN NN Number=Sing _ _ _ _ 7 localizes localize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 11 because because SCONJ IN _ _ _ _ _ 12 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 13 may may AUX MD VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 efficiently efficiently ADV RB _ _ _ _ _ 17 sequestered sequester VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5323 # text = The nuclear localization of Delta19 definitively demonstrates that the mechanisms by which beta-catenin localizes in the nucleus are completely independent of LEF/TCF factors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 localization localization NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Delta19 Delta19 PROPN NNP Number=Sing _ _ _ _ 6 definitively definitively ADV RB _ _ _ _ _ 7 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 catenin catenin NOUN NN Number=Sing _ _ _ _ 16 localizes localize NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 completely completely ADV RB _ _ _ _ _ 22 independent independent ADJ JJ Degree=Pos _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 LEF LEF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 / / PUNCT , _ _ _ _ SpaceAfter=No 26 TCF TCF PROPN NNP Number=Sing _ _ _ _ 27 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5324 # text = beta-Catenin and LEF-1 complexes can activate reporter gene expression in a transformed T-lymphocyte cell line (Jurkat) but not in normal T lymphocytes, even though both factors are nuclear. 1 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 Catenin Catenin PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 LEF LEF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 complexes complexe NOUN NNS Number=Plur _ _ _ _ 9 can can AUX MD VerbForm=Fin _ _ _ _ 10 activate activate VERB VB VerbForm=Inf _ _ _ _ 11 reporter reporter NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 line line NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 but but CCONJ CC _ _ _ _ _ 25 not not PART RB _ _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 normal normal ADJ JJ Degree=Pos _ _ _ _ 28 T T PROPN NNP Number=Sing _ _ _ _ 29 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 even even ADV RB _ _ _ _ _ 32 though though SCONJ IN _ _ _ _ _ 33 both both DET DT _ _ _ _ _ 34 factors factor NOUN NNS Number=Plur _ _ _ _ 35 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 36 nuclear nuclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 5325 # text = Thus, localization of both factors to the nucleus is not sufficient for activation of gene expression. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 localization localization NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 both both DET DT _ _ _ _ _ 6 factors factor NOUN NNS Number=Plur _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 gene gene ADJ JJ Degree=Pos _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 5326 # text = Excess beta-catenin can squelch reporter gene activation by LEF-1-beta-catenin complexes but not activation by the transcription factor VP16. 1 Excess Excess NOUN NN Number=Sing _ _ _ _ 2 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 catenin catenin NOUN NN Number=Sing _ _ _ _ 5 can can AUX MD VerbForm=Fin _ _ _ _ 6 squelch squelch VERB VB VerbForm=Inf _ _ _ _ 7 reporter reporter NOUN NN Number=Sing _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 LEF LEF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1-beta 1-beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 catenin catenin NOUN NN Number=Sing _ _ _ _ 16 complexes complex NOUN NNS Number=Plur _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 not not PART RB _ _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ _ 24 VP vp NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 16 16 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5327 # text = Taken together, these data suggest that a third component is necessary for gene activation and that this third component may vary with cell type. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 data data NOUN NN Number=Sing _ _ _ _ 6 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 third third ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 10 component component NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 19 third third ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 20 component component NOUN NN Number=Sing _ _ _ _ 21 may may AUX MD VerbForm=Fin _ _ _ _ 22 vary vary VERB VB VerbForm=Inf _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5328 # text = Document 003001287 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001287 003001287 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5329 # text = Every enhancer works with every promoter for all the combinations tested: could new regulatory pathways evolve by enhancer shuffling? 1 Every every DET DT _ _ _ _ _ 2 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 3 works work VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 every every DET DT _ _ _ _ _ 6 promoter promoter NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 all all DET PDT _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 combinations combination NOUN NNS Number=Plur _ _ _ _ 11 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 12 : : PUNCT : _ _ _ _ _ 13 could could AUX MD VerbForm=Fin _ _ _ _ 14 new new ADJ JJ Degree=Pos _ _ _ _ 15 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 16 pathways pathway NOUN NNS Number=Plur _ _ _ _ 17 evolve evolve VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 20 shuffling shuffling NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ? ? PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5330 # text = The promoters and enhancers of cell type-specific genes are often conserved in evolution, and hence one might expect that a given enhancer has evolved to work best with its own promoter. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 promoters promoter NOUN NNS Number=Plur _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 enhancers enhancer NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 often often ADV RB _ _ _ _ _ 13 conserved conserve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 evolution evolution NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 hence hence ADV RB _ _ _ _ _ 19 one one PRON PRP _ _ _ _ _ 20 might might AUX MD VerbForm=Fin _ _ _ _ 21 expect expect VERB VB VerbForm=Inf _ _ _ _ 22 that that SCONJ IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 given give VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 26 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 evolved evolve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 to to PART TO _ _ _ _ _ 29 work work VERB VB VerbForm=Inf _ _ _ _ 30 best best ADV RBS Degree=Sup _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 33 own own ADJ JJ Degree=Pos _ _ _ _ 34 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 5331 # text = While this expectation may be realized in some cases, we have not found evidence for it. 1 While while SCONJ IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 expectation expectation NOUN NN Number=Sing _ _ _ _ 4 may may AUX MD VerbForm=Fin _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 realized realize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 some some DET DT _ _ _ _ _ 9 cases case NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 12 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 evidence evidence NOUN NN Number=Sing _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 it it PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 5332 # text = A total of 27 combinations of different promoters and enhancers were tested by transfection into cultured cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 total total NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 27 27 NUM CD NumType=Card _ _ _ _ 5 combinations combination NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 different different ADJ JJ Degree=Pos _ _ _ _ 8 promoters promoter NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 enhancers enhancer NOUN NNS Number=Plur _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 tested test VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 transfection transfection NOUN NN Number=Sing _ _ _ _ 15 into into ADP IN _ _ _ _ _ 16 cultured culture ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 5333 # text = We found that the relative efficiency of the enhancers is approximately the same, irrespective of the type of promoter used, i.e., there was no strong preference for any given enhancer/promoter combination. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 relative relative ADJ JJ Degree=Pos _ _ _ _ 6 efficiency efficiency NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 enhancers enhancer NOUN NNS Number=Plur _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 approximately approximately ADV RB _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 same same ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 irrespective irrespective ADJ JJ Degree=Pos _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 type type NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 promoter promoter NOUN NN Number=Sing _ _ _ _ 21 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 i.e. i.e. X FW _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 there there PRON EX _ _ _ _ _ 26 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 no no DET DT _ _ _ _ _ 28 strong strong ADJ JJ Degree=Pos _ _ _ _ 29 preference preference NOUN NN Number=Sing _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 any any DET DT _ _ _ _ _ 32 given give VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 / / PUNCT , _ _ _ _ SpaceAfter=No 35 promoter promoter NOUN NN Number=Sing _ _ _ _ 36 combination combination NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 5334 # text = Notably, we do not see particularly strong transcription when the immunoglobulin kappa enhancer (or the immunoglobulin heavy chain enhancer) is used to activate a kappa gene promoter. 1 Notably notably ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 see see VERB VB VerbForm=Inf _ _ _ _ 7 particularly particularly ADV RB _ _ _ _ _ 8 strong strong ADJ JJ Degree=Pos _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 when when ADV WRB PronType=Int _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 or or CCONJ CC _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 19 heavy heavy ADJ JJ Degree=Pos _ _ _ _ 20 chain chain NOUN NN Number=Sing _ _ _ _ 21 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 activate activate VERB VB VerbForm=Inf _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 gene gene NOUN NN Number=Sing _ _ _ _ 30 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 5335 # text = We propose that a generally permissive enhancer/promoter interaction is of evolutionary benefit for higher eukaryotes: 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 generally generally ADV RB _ _ _ _ _ 6 permissive permissive ADJ JJ Degree=Pos _ _ _ _ 7 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 interaction interaction NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 evolutionary evolutionary ADJ JJ Degree=Pos _ _ _ _ 14 benefit benefit NOUN NN Number=Sing _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 higher higher ADJ JJR Degree=Cmp _ _ _ _ 17 eukaryotes eukaryote NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 : : PUNCT : _ _ _ _ _ # sent_id = 5336 # text = by enhancer shuffling, genes could be easily brought under a new type of inducibility/cell type specificity. 1 by by ADP IN _ _ _ _ _ 2 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 3 shuffling shuffling NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 genes gene NOUN NNS Number=Plur _ _ _ _ 6 could could AUX MD VerbForm=Fin _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 easily easily ADV RB _ _ _ _ _ 9 brought bring VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 under under ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 new new ADJ JJ Degree=Pos _ _ _ _ 13 type type NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 inducibility inducibility NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 / / PUNCT , _ _ _ _ SpaceAfter=No 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 type type NOUN NN Number=Sing _ _ _ _ 19 specificity specificity NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5337 # text = Document 003001291 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001291 003001291 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5338 # text = Single cell assay of a transcription factor reveals a threshold in transcription activated by signals emanating from the T-cell antigen receptor. 1 Single single ADJ JJ Degree=Pos _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 assay assay NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 reveals reveal VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 threshold threshold NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 signals signal NOUN NNS Number=Plur _ _ _ _ 16 emanating emanat VERB VBG VerbForm=Ger _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 22 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5339 # text = Stimulation of T lymphocytes through their antigen receptor leads to the appearance of several transcription factors, including NF-AT and NF-kappa B, which are involved in regulating genes required for immunologic activation. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 5 through through ADP IN _ _ _ _ _ 6 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 7 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 appearance appearance NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 several several ADJ JJ Degree=Pos _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 including include VERB VBG VerbForm=Ger _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 AT AT PROPN NNP Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa PROPN NNP Number=Sing _ _ _ _ 26 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 which which PRON WDT PronType=Rel _ _ _ _ 29 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 involved involved ADJ JJ Degree=Pos _ _ _ _ 31 in in SCONJ IN _ _ _ _ _ 32 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 33 genes gene NOUN NNS Number=Plur _ _ _ _ 34 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 immunologic immunologic ADJ JJ Degree=Pos _ _ _ _ 37 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 5340 # text = To investigate the activity of a single transcription factor in individual viable cells, we have applied an assay that uses the fluorescence-activated cell sorter to quantitate beta-galactosidase (beta-gal). 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 activity activity NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 single single ADJ JJ Degree=Pos _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 individual individual ADJ JJ Degree=Pos _ _ _ _ 12 viable viable ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 16 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 applied apply VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 assay assay NOUN NN Number=Sing _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 uses use VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 fluorescence fluorescence NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 sorter sorter NOUN NN Number=Sing _ _ _ _ 28 to to PART TO _ _ _ _ _ 29 quantitate quantitate VERB VB VerbForm=Inf _ _ _ _ 30 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 galactosidase galactosidase NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 gal gal NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 5341 # text = We have analyzed the distribution of NF-AT transcriptional activity among T cells undergoing activation by using a construct in which three tandem copies of the NF-AT-binding site directs transcription of the lacZ gene. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 distribution distribution NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 AT AT PROPN NNP Number=Sing _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 among among ADP IN _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 undergoing undergoing ADJ JJ Degree=Pos _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 by by SCONJ IN _ _ _ _ _ 18 using use VERB VBG VerbForm=Ger _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 construct construct NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 three three NUM CD NumType=Card _ _ _ _ 24 tandem tandem NOUN NN Number=Sing _ _ _ _ 25 copies copy NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 binding bind VERB VBG VerbForm=Ger _ _ _ _ 33 site site NOUN NN Number=Sing _ _ _ _ 34 directs direct NOUN NNS Number=Plur _ _ _ _ 35 transcription transcription NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 lacZ lacZ PROPN NNP Number=Sing _ _ _ _ 39 gene gene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 5342 # text = Unexpectedly, stimulation of cloned stably transfected Jurkat T cells leads to a bimodal pattern of beta-gal expression in which some cells express no beta-gal and others express high levels. 1 Unexpectedly unexpectedly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 stably stably ADV RB Degree=Pos _ _ _ _ 7 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 bimodal bimodal ADJ JJ Degree=Pos _ _ _ _ 15 pattern pattern NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 gal gal ADJ JJ Degree=Pos _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 some some DET DT _ _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 no no DET DT _ _ _ _ _ 27 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 gal gal NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 others other NOUN NNS Number=Plur _ _ _ _ 32 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 high high ADJ JJ Degree=Pos _ _ _ _ 34 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 5343 # text = This expression pattern cannot be accounted for by cell-cycle position or heritable variation. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 pattern pattern NOUN NN Number=Sing _ _ _ _ 4 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 5 not not PART RB _ _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 accounted account VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 cycle cycle NOUN NN Number=Sing _ _ _ _ 13 position position NOUN NN Number=Sing _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 heritable heritable ADJ JJ Degree=Pos _ _ _ _ 16 variation variation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 5344 # text = Further results, in which beta-gal activity is correlated with NF-AT-binding activity, indicate that the concentration of NF-AT must exceed a critical threshold before transcription initiates. 1 Further further ADJ JJ Degree=Pos _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 which which PRON WDT PronType=Rel _ _ _ _ 6 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 gal gal ADJ JJ Degree=Pos _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 correlated correlate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 AT at ADV RB _ _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 binding binding VERB VBG VerbForm=Ger _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 indicate indicate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 concentration concentration NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 AT at PRON WDT PronType=Rel _ _ _ _ 28 must must AUX MD VerbForm=Fin _ _ _ _ 29 exceed exceed VERB VB VerbForm=Inf _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 critical critical ADJ JJ Degree=Pos _ _ _ _ 32 threshold threshold NOUN NN Number=Sing _ _ _ _ 33 before before ADP IN _ _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ _ 35 initiates initiate NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 5345 # text = This threshold likely reflects the NF-AT concentration-dependent assembly of transcription complexes at the promoter. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 threshold threshold NOUN NN Number=Sing _ _ _ _ 3 likely likely ADV RB _ _ _ _ _ 4 reflects reflect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 AT at PROPN NNP Number=Sing _ _ _ _ 9 concentration concentration NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 assembly assembly NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 complexes complex NOUN NNS Number=Plur _ _ _ _ 16 at at ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 5346 # text = Similar constructs controlled by NF-kappa B or the entire interleukin-2 enhancer show bimodal expression patterns during induction, suggesting that thresholds set by the concentration of transcription factors may be a common property of inducible genes. 1 Similar similar ADJ JJ Degree=Pos _ _ _ _ 2 constructs construct NOUN NNS Number=Plur _ _ _ _ 3 controlled controll VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B b PROPN NNP Number=Sing _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 entire entire ADJ JJ Degree=Pos _ _ _ _ 12 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 16 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 bimodal bimodal ADJ JJ Degree=Pos _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 patterns pattern NOUN NNS Number=Plur _ _ _ _ 20 during during ADP IN _ _ _ _ _ 21 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 thresholds threshold NOUN NNS Number=Plur _ _ _ _ 26 set set VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 concentration concentration NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ _ 32 factors factor NOUN NNS Number=Plur _ _ _ _ 33 may may AUX MD VerbForm=Fin _ _ _ _ 34 be be AUX VB VerbForm=Inf _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 common common ADJ JJ Degree=Pos _ _ _ _ 37 property property NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 40 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5347 # text = Document 003001294 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001294 003001294 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5348 # text = One gene, two transcripts: isolation of an alternative transcript encoding for the autoantigen La/SS-B from a cDNA library of a patient with primary Sjogrens' syndrome. 1 One one NUM CD NumType=Card _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 transcripts transcript NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 : : PUNCT : _ _ _ _ _ 7 isolation isolation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 11 transcript transcript NOUN NN Number=Sing _ _ _ _ 12 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 autoantigen autoantigen ADJ JJ Degree=Pos _ _ _ _ 16 La/SS La/ss NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 B b NOUN NN Number=Sing _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 cDNA cDNA PROPN NNP Number=Sing _ _ _ _ 22 library library NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 patient patient NOUN NN Number=Sing _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 primary primary ADJ JJ Degree=Pos _ _ _ _ 28 Sjogrens Sjogrens PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 29 ' ' PART POS _ _ _ _ _ 30 syndrome syndrome NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5349 # text = A cDNA library was prepared from peripheral blood lymphocytes of an autoimmune patient with primary Sjogrens' syndrome. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 3 library library NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 prepared prepare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 8 blood blood NOUN NN Number=Sing _ _ _ _ 9 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 autoimmune autoimmune ADJ JJ Degree=Pos _ _ _ _ 13 patient patient NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 primary primary ADJ JJ Degree=Pos _ _ _ _ 16 Sjogrens sjogrens PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 17 ' ' PUNCT '' _ _ _ _ _ 18 syndrome syndrome NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 5350 # text = The cDNA library was screened with the patients own autoimmune serum being monospecific for the nuclear autoantigen La/SS-B. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 3 library library NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 screened screen VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 patients patient NOUN NNS Number=Plur _ _ _ _ 9 own own VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 autoimmune autoimmune ADJ JJ Degree=Pos _ _ _ _ 11 serum serum NOUN NN Number=Sing _ _ _ _ 12 being be AUX VBG VerbForm=Ger _ _ _ _ 13 monospecific monospecific ADJ JJ Degree=Pos _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 autoantigen autoantigen NOUN NN Number=Sing _ _ _ _ 18 La/SS La/ss PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5351 # text = Thereby an alternative type of La mRNA was identified that differed from the known La mRNA due to an exchange of the exon 1. 1 Thereby thereby ADV RB _ _ _ _ _ 2 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 La La PROPN NNP Number=Sing _ _ _ _ 7 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 differed differ VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 La La PROPN NNP Number=Sing _ _ _ _ 16 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 17 due due ADP IN _ _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 exchange exchange NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 exon exon NOUN NN Number=Sing _ _ _ _ 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5352 # text = Sequencing of the genomic region between the exons 1 and 2 showed that the alternative 5'-end is a part of the intron. 1 Sequencing Sequencing NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 5 region region NOUN NN Number=Sing _ _ _ _ 6 between between ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 exons exon NOUN NNS Number=Plur _ _ _ _ 9 1 1 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 2 2 NUM CD NumType=Card _ _ _ _ 12 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 16 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ' ' NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 - - PUNCT : _ _ _ _ SpaceAfter=No 19 end end NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 part part NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 intron intron NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5353 # text = In addition, the presence of an alternative promoter site, which exists within the intron downstream of the exon 1, became evident. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 presence presence NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 exists exist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 within within ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 intron intron NOUN NN Number=Sing _ _ _ _ 17 downstream downstream NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 exon exon NOUN NN Number=Sing _ _ _ _ 21 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 became become VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 evident evident ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5354 # text = In consequence, the alternative La mRNA is the result of a promoter switching combined with an alternative splicing mechanism. 1 In in ADP IN _ _ _ _ _ 2 consequence consequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 6 La La PROPN NNP Number=Sing _ _ _ _ 7 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 result result NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 switching switching VERB VBG VerbForm=Ger _ _ _ _ 15 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 19 splicing splicing NOUN NN Number=Sing _ _ _ _ 20 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5355 # text = In the intron, further transcription factor binding sites, including a NF-kappa B element, were identified leading to the suggestion that the expression of the gene encoding for the nuclear autoantigen La/SS-B alters in dependence on disease conditions. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 intron intron NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 further further ADJ JJ Degree=Pos _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 including include VERB VBG VerbForm=Ger _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 leading lead VERB VBG VerbForm=Ger _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 suggestion suggestion NOUN NN Number=Sing _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ _ 31 encoding encoding VERB VBG VerbForm=Ger _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 35 autoantigen autoantigen NOUN NN Number=Sing _ _ _ _ 36 La/SS La/ss NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 B b NOUN NN Number=Sing _ _ _ _ 39 alters alter NOUN NNS Number=Plur _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 dependence dependence NOUN NN Number=Sing _ _ _ _ 42 on on ADP IN _ _ _ _ _ 43 disease disease NOUN NN Number=Sing _ _ _ _ 44 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5356 # text = Document 003001295 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001295 003001295 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5357 # text = The promoter and 5' flanking sequences controlling human B29 gene expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 promoter promoter NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 ' ' PUNCT `` _ _ _ _ _ 6 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 7 sequences sequence NOUN NNS Number=Plur _ _ _ _ 8 controlling controlle VERB VBG VerbForm=Ger _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 B29 b29 NOUN NN Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5358 # text = The product of the B-cell-specific B29 gene (B29, Ig beta, CD79b) is essential for Ig-mediated B-cell activation via the B-cell antigen receptor complex (BCR) on human and murine B lymphocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 product product NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 B- B- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 8 B29 B29 NUM CD NumType=Card _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 B29 B29 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 Ig ig PROPN NNP Number=Sing _ _ _ _ 14 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 CD79 CD79 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 b b NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 essential essential ADJ JJ Degree=Pos _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 Ig- Ig- PUNCT : _ _ _ _ SpaceAfter=No 23 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ _ 28 via via ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 antigen antigen NOUN NN Number=Sing _ _ _ _ 34 receptor receptor NOUN NN Number=Sing _ _ _ _ 35 complex complex NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 BCR BCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 on on ADP IN _ _ _ _ _ 40 human human ADJ JJ Degree=Pos _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 murine murine ADJ JJ Degree=Pos _ _ _ _ 43 B b NOUN NN Number=Sing _ _ _ _ 44 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 5359 # text = To better understand the regulation of this pivotal gene, we have analyzed the human genomic DNA sequence upstream of the B29 ATG start codon for transcriptional control activity. 1 To to ADV RB _ _ _ _ _ 2 better better ADV RBR Degree=Cmp _ _ _ _ 3 understand understand VERB VB VerbForm=Inf _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 regulation regulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 pivotal pivotal NOUN NN Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 12 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 17 DNA dna NOUN NN Number=Sing _ _ _ _ 18 sequence sequence NOUN NN Number=Sing _ _ _ _ 19 upstream upstream NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 B29 B29 PROPN NNP Number=Sing _ _ _ _ 23 ATG ATG PROPN NNP Number=Sing _ _ _ _ 24 start start NOUN NN Number=Sing _ _ _ _ 25 codon codon NOUN NN Number=Sing _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 28 control control NOUN NN Number=Sing _ _ _ _ 29 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5360 # text = The human B29 gene lacks either a TATA or a CAAT box and transcription is initiated at multiple sites. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 B29 b29 NOUN NN Number=Sing _ _ _ _ 4 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 lacks lack NOUN NNS Number=Plur _ _ _ _ 6 either either CCONJ CC _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 TATA TATa NOUN NN Number=Sing _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 CAAT Caat NOUN NN Number=Sing _ _ _ _ 12 box box NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 initiated initiate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 at at ADP IN _ _ _ _ _ 18 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 19 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 5361 # text = The minimal promoter of the human B29 gene is contained within a 193-bp region 5' of these multiple start sites. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 3 promoter promoter NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 B29 b29 NOUN NN Number=Sing _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 contained contain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 within within ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 193 193 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 bp bp NOUN NN Number=Sing _ _ _ _ 16 region region NOUN NN Number=Sing _ _ _ _ 17 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ' ' NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 21 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 22 start start NOUN NN Number=Sing _ _ _ _ 23 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5362 # text = This minimal promoter exhibits B-cell-specific activity and contains SP1, ETS, OCT, and IKAROS/LYF-1 transcription factor motifs. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 3 promoter promoter NOUN NN Number=Sing _ _ _ _ 4 exhibits exhibit NOUN NNS Number=Plur _ _ _ _ 5 B- B- PUNCT : _ _ _ _ SpaceAfter=No 6 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 SP1 SP1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 ETS Ets PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 OCT Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 IKAROS IKAROS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 LYF LYF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5363 # text = All these motifs are strikingly conserved in sequence and placement relative to the previously characterized murine B29 promoter. 1 All all DET PDT _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 motifs motif NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 strikingly strikingly ADV RB _ _ _ _ _ 6 conserved conserve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 sequence sequence NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 placement placement NOUN NN Number=Sing _ _ _ _ 11 relative relative ADV RB _ _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 previously previously ADV RB _ _ _ _ _ 15 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 murine murine NOUN NN Number=Sing _ _ _ _ 17 B29 B29 NUM CD NumType=Card _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 5364 # text = Additional upstream gene segments dramatically affected B29 minimal promoter activity. 1 Additional additional ADJ JJ Degree=Pos _ _ _ _ 2 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ _ 4 segments segment NOUN NNS Number=Plur _ _ _ _ 5 dramatically dramatically ADV RB _ _ _ _ _ 6 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 B29 B29 NUM CD NumType=Card _ _ _ _ 8 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 5365 # text = A newly identified motif called the B29 conserved sequence (BCS), found upstream of both human and murine B29 promoters, appears to stimulate B29 transcription through a novel mechanism. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 newly newly ADV RB _ _ _ _ _ 3 identified identify ADJ JJ Degree=Pos _ _ _ _ 4 motif motif NOUN NN Number=Sing _ _ _ _ 5 called call VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 B29 b29 PROPN NNP Number=Sing _ _ _ _ 8 conserved conserve VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 sequence sequence NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 BCS BCS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 upstream upstream NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 both both CCONJ CC _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 murine murine ADJ JJ Degree=Pos _ _ _ _ 21 B29 B29 NUM CD NumType=Card _ _ _ _ 22 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 27 B29 B29 NUM CD NumType=Card _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 through through ADP IN _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 novel novel NOUN NN Number=Sing _ _ _ _ 32 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 5366 # text = A single BCS had little effect either on the minimal B29 promoter or on a heterologous promoter. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 single single ADJ JJ Degree=Pos _ _ _ _ 3 BCS Bcs PROPN NNP Number=Sing _ _ _ _ 4 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 little little ADJ JJ Degree=Pos _ _ _ _ 6 effect effect NOUN NN Number=Sing _ _ _ _ 7 either either CCONJ CC _ _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 11 B29 b29 NOUN NN Number=Sing _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 5367 # text = Instead, the BCS stimulated transcription by counteracting 5' negative regulatory DNA sequences that block the activity of the B29 minimal promoter in its absence. 1 Instead instead ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 BCS BCS PROPN NNPS Number=Plur _ _ _ _ 5 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 by by SCONJ IN _ _ _ _ _ 8 counteracting counteract VERB VBG VerbForm=Ger _ _ _ _ 9 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ' ' PUNCT `` _ _ _ _ _ 11 negative negative ADJ JJ Degree=Pos _ _ _ _ 12 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 13 DNA dna NOUN NN Number=Sing _ _ _ _ 14 sequences sequence NOUN NNS Number=Plur _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 block block VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 B29 B29 PROPN NNP Number=Sing _ _ _ _ 22 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 26 absence absence NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5368 # text = These findings indicate that B29 gene expression is controlled by the complex interplay of positive and negative regulatory elements. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 B29 B29 NUM CD NumType=Card _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 complex complex ADJ JJ Degree=Pos _ _ _ _ 13 interplay interplay NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 positive positive ADJ JJ Degree=Pos _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 negative negative ADJ JJ Degree=Pos _ _ _ _ 18 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 19 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5369 # text = Document 003001299 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001299 003001299 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5370 # text = Regulation of the tissue factor gene in human monocytic cells. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 tissue tissue NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 5371 # text = Role of AP-1, NF-kappa B/Rel, and Sp1 proteins in uninduced and lipopolysaccharide-induced expression. 1 Role role NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 16 proteins protein NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 uninduced uninduced ADJ JJ Degree=Pos _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5372 # text = Tissue factor (TF) expression by peripheral blood monocytes during sepsis initiates intravascular thrombosis. 1 Tissue Tissue NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 TF TF NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 9 blood blood NOUN NN Number=Sing _ _ _ _ 10 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 11 during during ADP IN _ _ _ _ _ 12 sepsis sepsis ADJ JJ Degree=Pos _ _ _ _ 13 initiates initiate NOUN NNS Number=Plur _ _ _ _ 14 intravascular intravascular ADJ JJ Degree=Pos _ _ _ _ 15 thrombosis thrombosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 5373 # text = Bacterial lipopolysaccharide (LPS) rapidly induces TF gene transcription in monocytes. 1 Bacterial Bacterial ADJ JJ Degree=Pos _ _ _ _ 2 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 LPS LPS INTJ UH _ _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 rapidly rapidly ADV RB _ _ _ _ _ 7 induces induce NOUN NNS Number=Plur _ _ _ _ 8 TF Tf ADP IN _ _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 5374 # text = The human TF promoter contains binding sites for the transcription factors AP-1, c-Rel/p65, Egr-1, and Sp1. NF-kappa B/Rel proteins have been shown to physically interact with both AP-1 and Sp1 proteins. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 TF Tf NOUN NN Number=Sing _ _ _ _ 4 promoter promoter NOUN NN Number=Sing _ _ _ _ 5 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 sites site NOUN NNS Number=Plur _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ _ 12 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 c- c- SYM NFP _ _ _ _ SpaceAfter=No 17 Rel/p65 Rel/p65 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa PROPN NNP Number=Sing _ _ _ _ 28 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 / / PUNCT , _ _ _ _ SpaceAfter=No 30 Rel Rel NOUN NN Number=Sing _ _ _ _ 31 proteins protein NOUN NNS Number=Plur _ _ _ _ 32 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 34 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 physically physically ADV RB _ _ _ _ _ 37 interact interact ADV RB _ _ _ _ _ 38 with with ADP IN _ _ _ _ _ 39 both both DET DT _ _ _ _ _ 40 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 1 1 NUM CD NumType=Card _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 45 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 5375 # text = In this study, we investigated the role of these transcription factors in uninduced and LPS-induced TF gene expression in human monocytic THP-1 cells. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 uninduced uninduced ADJ JJ Degree=Pos _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 LPS LPS ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 TF Tf NOUN NN Number=Sing _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 25 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5376 # text = Deletional analysis indicated that five Sp1 sites mediated basal expression in uninduced cells. 1 Deletional Deletional ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 five five NUM CD NumType=Card _ _ _ _ 6 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 7 sites site NOUN NNS Number=Plur _ _ _ _ 8 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 basal basal ADJ JJ Degree=Pos _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 uninduced uninduced ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 5377 # text = The two AP-1 sites bound c-Fos/c-Jun heterodimers in both unstimulated and LPS-stimulated cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 sites site NOUN NNS Number=Plur _ _ _ _ 7 bound bound ADP IN _ _ _ _ _ 8 c-Fos/c c-Fos/c ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 -Jun -Jun ADJ JJ Degree=Pos _ _ _ _ 10 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 both both DET DT _ _ _ _ _ 13 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 LPS LPS ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 5378 # text = Maximal LPS induction of the TF promoter required the two AP-1 sites and the kappa B site within the LPS response element. 1 Maximal Maximal ADJ JJ Degree=Pos _ _ _ _ 2 LPS Lps NOUN NN Number=Sing _ _ _ _ 3 induction induction NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 TF TF PROPN NNP Number=Sing _ _ _ _ 7 promoter promoter NOUN NN Number=Sing _ _ _ _ 8 required require VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 two two NUM CD NumType=Card _ _ _ _ 11 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 sites site NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 site site NOUN NN Number=Sing _ _ _ _ 20 within within ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 LPS LPS PROPN NNP Number=Sing _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ _ 24 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5379 # text = Disruption of the conserved spacing between the proximal AP-1 site and the kappa B site abolished LPS induction. 1 Disruption disruption NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 spacing spacing NOUN NN Number=Sing _ _ _ _ 6 between between ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 9 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 site site NOUN NN Number=Sing _ _ _ _ 18 abolished abolish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 LPS Lp NOUN NNS Number=Plur _ _ _ _ 20 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5380 # text = Replacement of the two AP-1 sites with intrinsically bent DNA partially restored LPS induction, suggesting an additional structural role for the AP-1 sites. 1 Replacement replacement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 sites site NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 intrinsically intrinsically ADV RB _ _ _ _ _ 11 bent bent ADJ JJ Degree=Pos _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 partially partially ADV RB _ _ _ _ _ 14 restored restore VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 LPS Lps PROPN NNP Number=Sing _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 additional additional ADJ JJ Degree=Pos _ _ _ _ 21 structural structural ADJ JJ Degree=Pos _ _ _ _ 22 role role NOUN NN Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5381 # text = Synergistic transactivation of the LPS response element in Drosophila Schneider cells by coexpression of c-Fos, c-Jun, c-Rel, and p65 or c-Jun and p65 required the transactivation domains of c-Jun and p65. 1 Synergistic Synergistic ADJ JJ Degree=Pos _ _ _ _ 2 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 LPS LPS PROPN NNP Number=Sing _ _ _ _ 6 response response NOUN NN Number=Sing _ _ _ _ 7 element element NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 Drosophila Drosophila PROPN NNP Number=Sing _ _ _ _ 10 Schneider Schneider PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 coexpression coexpression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 Fos Fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 c- c- SYM NFP _ _ _ _ SpaceAfter=No 20 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 c- c- SYM NFP _ _ _ _ SpaceAfter=No 23 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 p65 p65 NOUN NN Number=Sing _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 Jun Jun PROPN NNP Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 p65 p65 NUM CD NumType=Card _ _ _ _ 33 required require VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 36 domains domain NOUN NNS Number=Plur _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 Jun Jun PROPN NNP Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 5382 # text = These data indicated that c-Fos/c-Jun, c-Rel/p65, and Sp1 regulate TF gene expression in human monocytic cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 c-Fos/c c-Fos/c PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 -Jun -Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 c-Rel/p65 c-Rel/p65 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 12 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 13 TF TF PROPN NNP Number=Sing _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5383 # text = Document 003001303 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001303 003001303 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5384 # text = Nuclear factor-IL6 activates the human IL-4 promoter in T cells. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 IL6 IL6 PROPN NNP Number=Sing _ _ _ _ 5 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 4 4 NUM CD NumType=Card _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5385 # text = Positive regulatory element I (PRE-I) is a strong enhancer element essential for expression of the human IL-4 gene. 1 Positive positive ADJ JJ Degree=Pos _ _ _ _ 2 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 3 element element NOUN NN Number=Sing _ _ _ _ 4 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 PRE pre PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 strong strong ADJ JJ Degree=Pos _ _ _ _ 13 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 14 element element NOUN NN Number=Sing _ _ _ _ 15 essential essential ADJ JJ Degree=Pos _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 4 4 NUM CD NumType=Card _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5386 # text = To identify transcription factors binding to PRE-I, we screened a cDNA expression library from Jurkat T cells and isolated a cDNA encoding nuclear factor (NF)-IL6 (also known as C/EBP beta). 1 To to PART TO _ _ _ _ _ 2 identify identify VERB VB VerbForm=Inf _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factors factor NOUN NNS Number=Plur _ _ _ _ 5 binding bind VERB VBG VerbForm=Ger _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 PRE pre PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 12 screened screen VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 cDNA cDNA NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 library library NOUN NN Number=Sing _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 19 T T PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 isolated isolate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 25 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 26 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 also also ADV RB _ _ _ _ _ 35 known known VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 as as ADP IN _ _ _ _ _ 37 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 / / PUNCT , _ _ _ _ SpaceAfter=No 39 EBP EBP PROPN NNP Number=Sing _ _ _ _ 40 beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 5387 # text = NF-IL6 mRNA was found in human Jurkat T cells and in the mouse Th2 clone D10, but not in Th1 clone 29. 1 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 4 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 mouse mouse NOUN NN Number=Sing _ _ _ _ 16 Th2 Th2 NUM CD NumType=Card _ _ _ _ 17 clone clone NOUN NN Number=Sing _ _ _ _ 18 D10 D10 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 not not ADV RB _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 Th1 Th1 NUM CD NumType=Card _ _ _ _ 24 clone clone NOUN NN Number=Sing _ _ _ _ 25 29 29 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5388 # text = rNF-IL6 expressed in bacteria was shown to specifically bind to PRE-I. 1 rNF rNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 4 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 bacteria bacteria NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 specifically specifically ADV RB _ _ _ _ _ 11 bind bind VERB VB VerbForm=Inf _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 PRE pre PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 5389 # text = PRE-I forms multiple DNA-protein complexes with nuclear extracts from Jurkat cells. 1 PRE pre ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 4 forms form NOUN NNS Number=Plur _ _ _ _ 5 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 complexes complex NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 extracts extract NOUN NNS Number=Plur _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 5390 # text = Some of these complexes were demonstrated to contain NF-IL6 by using anti-C/EBP beta Abs. 1 Some some DET DT _ _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 complexes complexe NOUN NNS Number=Plur _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 contain contain VERB VB VerbForm=Inf _ _ _ _ 9 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 12 by by SCONJ IN _ _ _ _ _ 13 using use VERB VBG VerbForm=Ger _ _ _ _ 14 anti-C anti-C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 EBP EBP PROPN NNP Number=Sing _ _ _ _ 17 beta beta PROPN NNP Number=Sing _ _ _ _ 18 Abs Abs PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 5391 # text = Overexpression of NF-IL6 enhanced expression of the chloramphenicol acetyl transferase reporter gene linked to the PRE-I-thymidine kinase or the human IL-4 promoter more than 10-fold in Jurkat cells. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 IL6 IL6 PROPN NNP Number=Sing _ _ _ _ 6 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 11 acetyl acetyl NOUN NN Number=Sing _ _ _ _ 12 transferase transferase NOUN NN Number=Sing _ _ _ _ 13 reporter reporter NOUN NN Number=Sing _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 linked link VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 PRE pre NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 thymidine thymidine NOUN NN Number=Sing _ _ _ _ 23 kinase kinase NOUN NN Number=Sing _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 4 4 NUM CD NumType=Card _ _ _ _ 30 promoter promoter NOUN NN Number=Sing _ _ _ _ 31 more more ADJ JJR Degree=Cmp _ _ _ _ 32 than than ADP IN _ _ _ _ _ 33 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 - - PUNCT : _ _ _ _ SpaceAfter=No 35 fold fold NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 5392 # text = Promoter deletion studies revealed two additional NF-IL6 binding sites located at positions -44 to -36 (C/EBP proximal) and -87 to -79 (C/EBP medial), respectively. 1 Promoter Promoter NOUN NN Number=Sing _ _ _ _ 2 deletion deletion NOUN NN Number=Sing _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 two two NUM CD NumType=Card _ _ _ _ 6 additional additional ADJ JJ Degree=Pos _ _ _ _ 7 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 IL6 IL6 PROPN NNP Number=Sing _ _ _ _ 10 binding binding VERB VBG VerbForm=Ger _ _ _ _ 11 sites site NOUN NNS Number=Plur _ _ _ _ 12 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 at at ADP IN _ _ _ _ _ 14 positions position NOUN NNS Number=Plur _ _ _ _ 15 -44 -44 NUM CD NumType=Card _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 -36 -36 NUM CD NumType=Card _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 C/ c/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 EBP Ebp NOUN NN Number=Sing _ _ _ _ 21 proximal proximal NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 - - SYM SYM _ _ _ _ SpaceAfter=No 25 87 87 NUM CD NumType=Card _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 -79 -79 NUM CD NumType=Card _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 C/ C/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 EBP EBP NOUN NN Number=Sing _ _ _ _ 31 medial medial NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 5393 # text = Our results demonstrate that NF-IL6 is involved in transcriptional activation of the human IL-4 promoter in T cells. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 involved involved ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 4 4 NUM CD NumType=Card _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5394 # text = Document 003001311 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001311 003001311 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5395 # text = An 11-base-pair DNA sequence motif apparently unique to the human interleukin 4 gene confers responsiveness to T-cell activation signals. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 11 11 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 base base NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 pair pair NOUN NN Number=Sing _ _ _ _ 7 DNA dna NOUN NN Number=Sing _ _ _ _ 8 sequence sequence NOUN NN Number=Sing _ _ _ _ 9 motif motif NOUN NN Number=Sing _ _ _ _ 10 apparently apparently ADV RB _ _ _ _ _ 11 unique unique ADJ JJ Degree=Pos _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 16 4 4 NUM CD NumType=Card _ _ _ _ 17 gene gene ADJ JJ Degree=Pos _ _ _ _ 18 confers confer NOUN NNS Number=Plur _ _ _ _ 19 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5396 # text = We have identified a DNA segment that confers responsiveness to antigen stimulation signals on the human interleukin (IL) 4 gene in Jurkat cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 DNA dna NOUN NN Number=Sing _ _ _ _ 6 segment segment NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 confers confer VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 antigen antigen VERB VB VerbForm=Inf _ _ _ _ 12 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 13 signals signal NOUN NNS Number=Plur _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 4 4 NUM CD NumType=Card _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5397 # text = The human IL-4 gene, of 10 kilobases, is composed of four exons and three introns. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 4 4 NUM CD NumType=Card _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 10 10 NUM CD NumType=Card _ _ _ _ 10 kilobases kilobase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 four four NUM CD NumType=Card _ _ _ _ 16 exons exon NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 three three NUM CD NumType=Card _ _ _ _ 19 introns intron NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 5398 # text = A cis-acting element (P sequence) resides in the 5' upstream region; no additional DNA segments with enhancer activity were identified in the human IL-4 gene. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 acting acting VERB VBG VerbForm=Ger _ _ _ _ 5 element element NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 P p NOUN NN Number=Sing _ _ _ _ 8 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 resides reside NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ' ' PUNCT `` _ _ _ _ _ 15 upstream upstream NOUN NN Number=Sing _ _ _ _ 16 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ; ; PUNCT , _ _ _ _ _ 18 no no DET DT _ _ _ _ _ 19 additional additional ADJ JJ Degree=Pos _ _ _ _ 20 DNA dna NOUN NN Number=Sing _ _ _ _ 21 segments segment NOUN NNS Number=Plur _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ _ 25 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 4 4 NUM CD NumType=Card _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 5399 # text = For further mapping purposes, a fusion promoter was constructed with the granulocyte/macrophage colony-stimulating factor basic promoter containing 60 base pairs of sequence upstream from the cap site of the mouse granulocyte/macrophage colony-stimulating factor gene and various lengths of the 5' upstream sequence of the IL-4 gene. 1 For for ADP IN _ _ _ _ _ 2 further further ADJ JJ Degree=Pos _ _ _ _ 3 mapping mapping NOUN NN Number=Sing _ _ _ _ 4 purposes purpose NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 fusion fusion NOUN NN Number=Sing _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 constructed construct VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 16 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 stimulating stimulate VERB VBG VerbForm=Ger _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 basic basic ADJ JJ Degree=Pos _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 containing contain VERB VBG VerbForm=Ger _ _ _ _ 23 60 60 NUM CD NumType=Card _ _ _ _ 24 base base NOUN NN Number=Sing _ _ _ _ 25 pairs pair NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 sequence sequence NOUN NN Number=Sing _ _ _ _ 28 upstream upstream NOUN NN Number=Sing _ _ _ _ 29 from from ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 cap cap NOUN NN Number=Sing _ _ _ _ 32 site site NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 mouse mouse NOUN NN Number=Sing _ _ _ _ 36 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 / / PUNCT , _ _ _ _ SpaceAfter=No 38 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 39 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 stimulating stimulate VERB VBG VerbForm=Ger _ _ _ _ 42 factor factor NOUN NN Number=Sing _ _ _ _ 43 gene gene NOUN NN Number=Sing _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 various various ADJ JJ Degree=Pos _ _ _ _ 46 lengths length NOUN NNS Number=Plur _ _ _ _ 47 of of ADP IN _ _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 ' 's PUNCT `` _ _ _ _ _ 51 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 52 sequence sequence NOUN NN Number=Sing _ _ _ _ 53 of of ADP IN _ _ _ _ _ 54 the the DET DT Definite=Def|PronType=Art _ _ _ _ 55 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 56 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 57 4 4 NUM CD NumType=Card _ _ _ _ 58 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 5400 # text = The P sequence was located between positions -79 and -69 relative to the transcription start site of the human IL-4 gene, and this location was confirmed by base-substitution mutations. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 P p NOUN NN Number=Sing _ _ _ _ 3 sequence sequence NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 between between ADP IN _ _ _ _ _ 7 positions position NOUN NNS Number=Plur _ _ _ _ 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 79 79 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 - - SYM SYM _ _ _ _ SpaceAfter=No 12 69 69 NUM CD NumType=Card _ _ _ _ 13 relative relative ADV RB _ _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 start start NOUN NN Number=Sing _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 4 4 NUM CD NumType=Card _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 29 location location NOUN NN Number=Sing _ _ _ _ 30 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 31 confirmed confirm VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 base base NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 substitution substitution NOUN NN Number=Sing _ _ _ _ 36 mutations mutation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 5401 # text = The plasmids carrying multiple copies of the P sequence showed higher responsiveness to the stimulation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 3 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 4 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 5 copies copy NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 P P PROPN NNP Number=Sing _ _ _ _ 9 sequence sequence NOUN NN Number=Sing _ _ _ _ 10 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 higher higher ADJ JJR Degree=Cmp _ _ _ _ 12 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 5402 # text = The binding protein(s) that recognize the P sequence of the IL-4 gene were identified by DNA-mobility-shift assays. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 binding binding NOUN NN Number=Sing _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 s s X AFX _ _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 recognize recognize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 P P NOUN NN Number=Sing _ _ _ _ 11 sequence sequence NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 4 4 NUM CD NumType=Card _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 mobility mobility NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 shift shift NOUN NN Number=Sing _ _ _ _ 26 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5403 # text = The binding of NF(P) (a DNA binding protein that specifically recognizes the P sequence) to the P sequence was abolished when oligonucleotides carrying base substitutions were used, indicating that the NF(P) interaction is sequence-specific and that binding specificity of the protein paralleled the sequence requirements for IL-4 expression in vivo. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 binding binding NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 P p PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 specifically specifically ADV RB _ _ _ _ _ 15 recognizes recognize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 P p NOUN NN Number=Sing _ _ _ _ 18 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 P p NOUN NN Number=Sing _ _ _ _ 23 sequence sequence NOUN NN Number=Sing _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 abolished abolish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 when when ADV WRB PronType=Int _ _ _ _ 27 oligonucleotides oligonucleotides SCONJ IN _ _ _ _ _ 28 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 29 base base NOUN NN Number=Sing _ _ _ _ 30 substitutions substitution NOUN NNS Number=Plur _ _ _ _ 31 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 35 that that SCONJ IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 P P NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 interaction interaction NOUN NN Number=Sing _ _ _ _ 42 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 43 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 specific specific ADJ JJ Degree=Pos _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 that that SCONJ IN _ _ _ _ _ 48 binding bind VERB VBG VerbForm=Ger _ _ _ _ 49 specificity specificity NOUN NN Number=Sing _ _ _ _ 50 of of ADP IN _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 protein protein NOUN NN Number=Sing _ _ _ _ 53 paralleled parallel VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 54 the the DET DT Definite=Def|PronType=Art _ _ _ _ 55 sequence sequence NOUN NN Number=Sing _ _ _ _ 56 requirements requirement NOUN NNS Number=Plur _ _ _ _ 57 for for ADP IN _ _ _ _ _ 58 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 59 - - PUNCT , _ _ _ _ SpaceAfter=No 60 4 4 NUM CD NumType=Card _ _ _ _ 61 expression expression NOUN NN Number=Sing _ _ _ _ 62 in in ADP IN _ _ _ _ _ 63 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 64 . . PUNCT . _ _ _ _ _ # sent_id = 5404 # text = The P sequence does not share homology with the 5' upstream sequence of the IL-2 gene, even though surrounding sequences of the IL-4 gene share high homology with the IL-2 gene. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 P p NOUN NN Number=Sing _ _ _ _ 3 sequence sequence NOUN NN Number=Sing _ _ _ _ 4 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 share share VERB VB VerbForm=Inf _ _ _ _ 7 homology homology NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ' ' PUNCT `` _ _ _ _ _ 12 upstream upstream NOUN NN Number=Sing _ _ _ _ 13 sequence sequence NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 even even ADV RB _ _ _ _ _ 22 though though SCONJ IN _ _ _ _ _ 23 surrounding surround VERB VBG VerbForm=Ger _ _ _ _ 24 sequences sequence NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 4 4 NUM CD NumType=Card _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ _ 31 share share NOUN NN Number=Sing _ _ _ _ 32 high high ADJ JJ Degree=Pos _ _ _ _ 33 homology homology NOUN NN Number=Sing _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 2 2 NUM CD NumType=Card _ _ _ _ 39 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 5405 # text = We conclude that a different set of proteins recognize IL-2 and IL-4 genes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 different different ADJ JJ Degree=Pos _ _ _ _ 6 set set NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 proteins protein NOUN NNS Number=Plur _ _ _ _ 9 recognize recognize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 4 4 NUM CD NumType=Card _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5406 # text = Document 003001312 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001312 003001312 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5407 # text = PPARalpha activators inhibit cytokine-induced vascular cell adhesion molecule-1 expression in human endothelial cells. 1 PPARalpha PPARalpha PROPN NNP Number=Sing _ _ _ _ 2 activators activator NOUN NNS Number=Plur _ _ _ _ 3 inhibit inhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 10 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5408 # text = BACKGROUND: Adhesion molecule expression on the endothelial cell (EC) surface is critical for leukocyte recruitment to atherosclerotic lesions. 1 BACKGROUND background NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Adhesion Adhesion NOUN NN Number=Sing _ _ _ _ 4 molecule molecule NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 surface surface NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 critical critical ADJ JJ Degree=Pos _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 18 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 atherosclerotic atherosclerotic ADJ JJ Degree=Pos _ _ _ _ 21 lesions lesion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5409 # text = Better understanding of transcriptional regulation of adhesion molecules in ECs may provide important insight into plaque formation. 1 Better better ADJ JJ Degree=Pos _ _ _ _ 2 understanding understanding NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 regulation regulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 8 molecules molecule NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 ECs EC PROPN NNP Number=Sing _ _ _ _ 11 may may AUX MD VerbForm=Fin _ _ _ _ 12 provide provide VERB VB VerbForm=Inf _ _ _ _ 13 important important ADJ JJ Degree=Pos _ _ _ _ 14 insight insight NOUN NN Number=Sing _ _ _ _ 15 into into ADP IN _ _ _ _ _ 16 plaque plaque NOUN NN Number=Sing _ _ _ _ 17 formation formation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 5410 # text = Peroxisome proliferator-activated receptor-alpha (PPARalpha), a member of the nuclear receptor family, regulates gene expression in response to certain fatty acids and fibric acid derivatives. 1 Peroxisome Peroxisome DET DT _ _ _ _ _ 2 proliferator proliferator NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 PPARalpha PPARalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 member member NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 gene gene ADJ JJ Degree=Pos _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 response response NOUN NN Number=Sing _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 certain certain ADJ JJ Degree=Pos _ _ _ _ 27 fatty fatty NOUN NN Number=Sing _ _ _ _ 28 acids acid NOUN NNS Number=Plur _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 fibric fibric ADJ JJ Degree=Pos _ _ _ _ 31 acid acid ADJ JJ Degree=Pos _ _ _ _ 32 derivatives derivative NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 5411 # text = The present study investigated PPARalpha expression in human ECs and their regulation of vascular cell adhesion molecule-1 (VCAM-1). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 PPARalpha PPARalpha PROPN NNP Number=Sing _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 ECs EC NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 12 regulation regulation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 17 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5412 # text = METHODS AND RESULTS: 1 METHODS method NOUN NNS Number=Plur _ _ _ _ 2 AND and CCONJ CC _ _ _ _ _ 3 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ # sent_id = 5413 # text = Immunohistochemistry revealed that human carotid artery ECs express PPARalpha. 1 Immunohistochemistry Immunohistochemistry PROPN NNP Number=Sing _ _ _ _ 2 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 carotid carotid NOUN NN Number=Sing _ _ _ _ 6 artery artery NOUN NN Number=Sing _ _ _ _ 7 ECs Ecs PROPN NNP Number=Sing _ _ _ _ 8 express express PROPN NNP Number=Sing _ _ _ _ 9 PPARalpha PPARalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 5414 # text = Pretreatment of cultured human ECs with the PPARalpha activators fenofibrate or WY14643 inhibited TNF-alpha-induced VCAM-1 in a time- and concentration-dependent manner, an effect not seen with PPARgamma activators. 1 Pretreatment Pretreatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cultured culture ADJ JJ Degree=Pos _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 ECs EC NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 PPARalpha PPARalpha PROPN NNP Number=Sing _ _ _ _ 9 activators activator NOUN NNS Number=Plur _ _ _ _ 10 fenofibrate fenofibrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 WY WY VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 13 14643 14643 NUM CD NumType=Card _ _ _ _ 14 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 concentration concentration NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 31 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 effect effect NOUN NN Number=Sing _ _ _ _ 35 not not PART RB _ _ _ _ _ 36 seen see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 PPARgamma PPARgamma PROPN NNP Number=Sing _ _ _ _ 39 activators activator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 5415 # text = Both PPARalpha activators decreased cytokine-induced VCAM-1 mRNA expression without altering its mRNA half-life. 1 Both both DET DT _ _ _ _ _ 2 PPARalpha PPARalpha NOUN NN Number=Sing _ _ _ _ 3 activators activator NOUN NNS Number=Plur _ _ _ _ 4 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 without without SCONJ IN _ _ _ _ _ 14 altering alter VERB VBG VerbForm=Ger _ _ _ _ 15 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 16 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 18 half half NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 life life NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5416 # text = Transient transfection of deletional VCAM-1 promoter constructs and electrophoretic mobility shift assays suggest that fenofibrate inhibits VCAM-1 transcription in part by inhibiting NF-kappaB. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 transfection transfection NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 deletional deletional ADJ JJ Degree=Pos _ _ _ _ 5 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 constructs construct NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 12 mobility mobility NOUN NN Number=Sing _ _ _ _ 13 shift shift NOUN NN Number=Sing _ _ _ _ 14 assays assay NOUN NNS Number=Plur _ _ _ _ 15 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 fenofibrate fenofibrate ADJ JJ Degree=Pos _ _ _ _ 18 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 19 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 part part NOUN NN Number=Sing _ _ _ _ 25 by by SCONJ IN _ _ _ _ _ 26 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5417 # text = Finally, PPARalpha activators significantly reduced adhesion of U937 cells to cultured human ECs. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 PPARalpha PPARalpha PROPN NNP Number=Sing _ _ _ _ 4 activators activator NOUN NNS Number=Plur _ _ _ _ 5 significantly significantly ADV RB _ _ _ _ _ 6 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 U937 U937 NUM CD NumType=Card _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 cultured culture ADJ JJ Degree=Pos _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 ECs EC PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 5418 # text = CONCLUSIONS: 1 CONCLUSIONS conclusion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 5419 # text = Human ECs express PPARalpha, a potentially important regulator of atherogenesis through its transcriptional control of VCAM-1 gene expression. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 ECs EC NOUN NNS Number=Plur _ _ _ _ 3 express express ADJ JJ Degree=Pos _ _ _ _ 4 PPARalpha PPARalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 potentially potentially ADV RB _ _ _ _ _ 8 important important ADJ JJ Degree=Pos _ _ _ _ 9 regulator regulator NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 atherogenesis atherogenesis PRON DT Number=Sing|PronType=Dem _ _ _ _ 12 through through ADP IN _ _ _ _ _ 13 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 15 control control NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5420 # text = Such findings also have implications regarding the clinical use of lipid-lowering agents, like fibric acids, which can activate PPARalpha. 1 Such such ADJ JJ Degree=Pos _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 implications implication NOUN NNS Number=Plur _ _ _ _ 6 regarding regard VERB VBG VerbForm=Ger _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 9 use use NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 lipid lipid NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 lowering lowering VERB VBG VerbForm=Ger _ _ _ _ 14 agents agent NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 like like ADP IN _ _ _ _ _ 17 fibric fibric ADJ JJ Degree=Pos _ _ _ _ 18 acids acid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 which which PRON WDT PronType=Rel _ _ _ _ 21 can can AUX MD VerbForm=Fin _ _ _ _ 22 activate activate VERB VB VerbForm=Inf _ _ _ _ 23 PPARalpha PPARalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5421 # text = Document 003001318 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001318 003001318 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5422 # text = S-allyl cysteine inhibits activation of nuclear factor kappa B in human T cells. 1 S- S- SYM NFP _ _ _ _ SpaceAfter=No 2 allyl allyl NOUN NN Number=Sing _ _ _ _ 3 cysteine cysteine PRON PRP _ _ _ _ _ 4 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5423 # text = Reactive oxygen species are involved in signal transduction pathways leading to nuclear factor kappa B (NF-kappa B) activation which has been implicated in the regulation of gene transcription. 1 Reactive Reactive ADJ JJ Degree=Pos _ _ _ _ 2 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 3 species species NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 involved involved ADJ JJ Degree=Pos _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 signal signal ADJ JJ Degree=Pos _ _ _ _ 8 transduction transduction NOUN NN Number=Sing _ _ _ _ 9 pathways pathway NOUN NNS Number=Plur _ _ _ _ 10 leading lead VERB VBG VerbForm=Ger _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 26 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 regulation regulation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 gene gene ADJ JJ Degree=Pos _ _ _ _ 32 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 5424 # text = We recently reported that a garlic compound, S-allyl cysteine (SAC), protects bovine pulmonary artery endothelial cells from oxidant injury induced by hydrogen peroxide (H2O2). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 recently recently ADV RB _ _ _ _ _ 3 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 garlic garlic ADJ JJ Degree=Pos _ _ _ _ 7 compound compound NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 S- S- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 allyl allyl NOUN NN Number=Sing _ _ _ _ 11 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 SAC SAC NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 protects protect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 bovine bovine PRON PRP _ _ _ _ _ 18 pulmonary pulmonary ADJ JJ Degree=Pos _ _ _ _ 19 artery artery NOUN NN Number=Sing _ _ _ _ 20 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 oxidant oxidant ADJ JJ Degree=Pos _ _ _ _ 24 injury injury NOUN NN Number=Sing _ _ _ _ 25 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 hydrogen hydrogen NOUN NN Number=Sing _ _ _ _ 28 peroxide peroxide NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 H2 H2 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 O2 O2 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 5425 # text = In this study we determined the effects of SAC on NF-kappa B activation in human T lymphocytes (Jurkat cells) induced by tumor necrosis factor alpha (TNF- alpha) and H2O2. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 determined determine VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 effects effect NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 SAC SAC PROPN NNP Number=Sing _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 tumor tumor NOUN NN Number=Sing _ _ _ _ 27 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 28 factor factor NOUN NN Number=Sing _ _ _ _ 29 alpha alpha NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ _ 33 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 H2 H2 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 O2 O2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 5426 # text = Activated NF-kappa B in nuclear extracts was measured by an electrophoretic mobility shift assay using 32P-labeled probe. 1 Activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 extracts extract NOUN NNS Number=Plur _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 measured measure VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 14 mobility mobility NOUN NN Number=Sing _ _ _ _ 15 shift shift NOUN NN Number=Sing _ _ _ _ 16 assay assay NOUN NN Number=Sing _ _ _ _ 17 using use VERB VBG VerbForm=Ger _ _ _ _ 18 32P 32p NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 labeled label VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 probe probe NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5427 # text = SAC consistently exhibited a dose-dependent inhibition of NF-kappa B activation induced by both TNF-alpha and H2O2. 1 SAC SAC PROPN NNP Number=Sing _ _ _ _ 2 consistently consistently ADV RB _ _ _ _ _ 3 exhibited exhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 8 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 both both DET DT _ _ _ _ _ 18 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 alpha alpha NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 H2 H2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 O2 O2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5428 # text = Supershift with specific antibodies to NF-kappa B subunits confirmed that the inducible retarded bands observed in the EMSA and p65-p50 heterodimer of the NF-kappa B/Rel protein. 1 Supershift Supershift VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 specific specific ADJ JJ Degree=Pos _ _ _ _ 4 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 subunits subunit NOUN NNS Number=Plur _ _ _ _ 11 confirmed confirm VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 15 retarded retarded ADJ JJ Degree=Pos _ _ _ _ 16 bands band NOUN NNS Number=Plur _ _ _ _ 17 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 EMSA EMSA PROPN NNP Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 p50 p50 NOUN NN Number=Sing _ _ _ _ 25 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappa kappa PROPN NNP Number=Sing _ _ _ _ 31 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 / / PUNCT , _ _ _ _ SpaceAfter=No 33 Rel Rel PROPN NNP Number=Sing _ _ _ _ 34 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 5429 # text = Our data suggest that SAC may act via antioxidant mechanisms to block NF-kappa B activation in Jurkat cells. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 SAC SAC PROPN NNP Number=Sing _ _ _ _ 6 may may AUX MD VerbForm=Fin _ _ _ _ 7 act act VERB VB VerbForm=Inf _ _ _ _ 8 via via ADP IN _ _ _ _ _ 9 antioxidant antioxidant ADJ JJ Degree=Pos _ _ _ _ 10 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 block block VERB VB VerbForm=Inf _ _ _ _ 13 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5430 # text = Document 003001332 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001332 003001332 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5431 # text = Inducible expression and phosphorylation of coactivator BOB.1/OBF.1 in T cells [see comments] BOB.1/OBF.1 is a transcriptional coactivator that is constitutively expressed in B cells and interacts with the Oct1 and Oct2 transcription factors. 1 Inducible Inducible ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 7 BOB.1/OBF BOB.1/OBF ADP IN _ _ _ _ SpaceAfter=No 8 .1 .1 NUM CD NumType=Card _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 see see VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 14 comments comment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n 16 BOB.1/OBF BOB.1/OBF NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 .1 .1 NUM CD NumType=Card _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 21 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 constitutively constitutively ADV RB _ _ _ _ _ 25 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 B b ADJ JJ Degree=Pos _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 interacts interact NOUN NNS Number=Plur _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 Oct1 oct1 PROPN NNP Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 Oct2 Oct2 NUM CD NumType=Card _ _ _ _ 36 transcription transcription NOUN NN Number=Sing _ _ _ _ 37 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 5432 # text = Upon activation of Jurkat T cells and primary murine thymocytes with phorbol esters and ionomycin, BOB.1/OBF.1 expression and transactivation function were induced. 1 Upon upon ADP IN _ _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 5 T T PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 primary primary ADJ JJ Degree=Pos _ _ _ _ 9 murine murine NOUN NN Number=Sing _ _ _ _ 10 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 13 esters ester NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 ionomycin ionomycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 BOB.1/OBF BOB.1/OBF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 .1 .1 NUM CD NumType=Card _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 22 function function NOUN NN Number=Sing _ _ _ _ 23 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5433 # text = BOB.1/OBF.1 was phosphorylated at Ser184 both in vivo and in vitro, and this modification was required for inducible activation. 1 BOB.1/OBF BOB.1/OBF ADP IN _ _ _ _ SpaceAfter=No 2 .1 .1 NUM CD NumType=Card _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 at at ADP IN _ _ _ _ _ 6 Ser184 Ser184 PROPN NNP Number=Sing _ _ _ _ 7 both both CCONJ CC _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 vivo vivo NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 16 modification modification NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5434 # text = Mutation of Ser184 also diminished transactivation function in B cells, suggesting that the activating phosphorylation that is inducible in T cells is constitutively present in B cells. 1 Mutation Mutation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Ser184 Ser184 PROPN NNP Number=Sing _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 diminished diminish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 7 function function NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 B b ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 activating activat VERB VBG VerbForm=Ger _ _ _ _ 16 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 constitutively constitutively ADV RB _ _ _ _ _ 25 present present ADJ JJ Degree=Pos _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 B b ADJ JJ Degree=Pos _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5435 # text = Thus, BOB.1/OBF.1 is a transcriptional coactivator that is critically regulated by posttranslational modifications to mediate cell type-specific gene expression. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 BOB.1/OBF BOB.1/OBF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 .1 .1 NUM CD NumType=Card _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 8 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 critically critically ADV RB _ _ _ _ _ 12 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 posttranslational posttranslational ADJ JJ Degree=Pos _ _ _ _ 15 modifications modification NOUN NNS Number=Plur _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 specific specific ADJ JJ Degree=Pos _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5436 # text = Document 003001341 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001341 003001341 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5437 # text = Molecular basis of a multiple lymphokine deficiency in a patient with severe combined immunodeficiency. 1 Molecular Molecular ADJ JJ Degree=Pos _ _ _ _ 2 basis basis NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 6 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 7 deficiency deficiency NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 patient patient NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 severe severe ADJ JJ Degree=Pos _ _ _ _ 13 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5438 # text = We have previously reported that the T lymphocytes of a child with severe combined immunodeficiency are defective in the transcription of several lymphokine genes that include IL2, IL3, IL4, and IL5, which encode interleukins 2, 3, 4, and 5 (IL-2, -3, -4, and -5). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 reported report VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 child child NOUN NN Number=Sing _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 severe severe ADJ JJ Degree=Pos _ _ _ _ 14 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 defective defective ADJ JJ Degree=Pos _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 several several ADJ JJ Degree=Pos _ _ _ _ 23 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 24 genes gene NOUN NNS Number=Plur _ _ _ _ 25 that that PRON WDT PronType=Rel _ _ _ _ 26 include include VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 IL2 IL2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 IL3 IL3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 IL4 IL4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 IL5 IL5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 which which PRON WDT PronType=Rel _ _ _ _ 37 encode encode VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 38 interleukins interleukin NOUN NNS Number=Plur _ _ _ _ 39 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 5 5 NUM CD NumType=Card _ _ _ _ 47 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 48 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 51 , , PUNCT , _ _ _ _ _ 52 - - SYM SYM _ _ _ _ SpaceAfter=No 53 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 54 , , PUNCT , _ _ _ _ _ 55 - - SYM SYM _ _ _ _ SpaceAfter=No 56 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 57 , , PUNCT , _ _ _ _ _ 58 and and CCONJ CC _ _ _ _ _ 59 - - SYM SYM _ _ _ _ SpaceAfter=No 60 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 61 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 62 . . PUNCT . _ _ _ _ _ # sent_id = 5439 # text = To determine whether the defect in the patient's T lymphocytes involved a trans-acting factor common to the affected lymphokine genes, we examined the ability of nuclear factors from the patient's T lymphocytes to bind response elements present in the regulatory region of IL2. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 defect defect NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 patient patient NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 's 's PART POS _ _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 12 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 trans trans NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 acting act VERB VBG VerbForm=Ger _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 common common ADJ JJ Degree=Pos _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 23 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 26 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 ability ability NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 31 factors factor NOUN NNS Number=Plur _ _ _ _ 32 from from ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 patient patient NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 's 's PART POS _ _ _ _ _ 36 T t PROPN NNP Number=Sing _ _ _ _ 37 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 38 to to PART TO _ _ _ _ _ 39 bind bind VERB VB VerbForm=Inf _ _ _ _ 40 response response NOUN NN Number=Sing _ _ _ _ 41 elements element NOUN NNS Number=Plur _ _ _ _ 42 present present ADJ JJ Degree=Pos _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 46 region region NOUN NN Number=Sing _ _ _ _ 47 of of ADP IN _ _ _ _ _ 48 IL2 IL2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 5440 # text = Nuclear factor NF-kB, activation protein 1 (AP-1), OCT-1, and NF-IL-2B binding activity were normal. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kB kb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 1 1 NUM CD NumType=Card _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 OCT Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2B 2B PROPN NNP Number=Sing _ _ _ _ 26 binding binding VERB VBG VerbForm=Ger _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ _ 28 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 normal normal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5441 # text = In contrast, the binding of the nuclear factor of activated T cells (NF-AT) to its response element in the IL2 enhancer and to an NF-AT-like response element present in the IL4 enhancer was abnormal. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 binding binding NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 T T PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 response response NOUN NN Number=Sing _ _ _ _ 22 element element NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 IL2 Il2 NOUN NN Number=Sing _ _ _ _ 26 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 like like ADJ JJ Degree=Pos _ _ _ _ 35 response response NOUN NN Number=Sing _ _ _ _ 36 element element NOUN NN Number=Sing _ _ _ _ 37 present present ADJ JJ Degree=Pos _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 IL4 IL4 PROPN NNP Number=Sing _ _ _ _ 41 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 42 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 43 abnormal abnormal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 5442 # text = To ascertain whether the abnormal NF-AT binding activity was related to an impaired function, we transfected patient and control T lymphocytes with constructs containing the reporter gene encoding chloramphenicol acetyl transferase (CAT) under the control of the entire IL2 regulatory region or of multimers of individual enhancer sequences. 1 To to PART TO _ _ _ _ _ 2 ascertain ascertain VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 abnormal abnormal ADJ JJ Degree=Pos _ _ _ _ 6 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 AT at SCONJ IN _ _ _ _ _ 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 related related ADJ JJ Degree=Pos _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 impaired impaired VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 19 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 patient patient NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 control control NOUN NN Number=Sing _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 constructs constructs NOUN NNS Number=Plur _ _ _ _ 27 containing contain VERB VBG VerbForm=Ger _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 reporter reporter NOUN NN Number=Sing _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ _ 31 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 32 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 33 acetyl acetyl NOUN NN Number=Sing _ _ _ _ 34 transferase transferase NOUN NN Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 CAT cat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 under under ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 control control NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 entire entire ADJ JJ Degree=Pos _ _ _ _ 44 IL2 Il2 NUM CD NumType=Card _ _ _ _ 45 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 46 region region NOUN NN Number=Sing _ _ _ _ 47 or or CCONJ CC _ _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 multimers multimer NOUN NNS Number=Plur _ _ _ _ 50 of of ADP IN _ _ _ _ _ 51 individual individual ADJ JJ Degree=Pos _ _ _ _ 52 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 53 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 5443 # text = CAT expression directed by the IL2 regulatory region or by a multimer of the NF-AT-binding site was markedly lower in the patient relative to controls. 1 CAT cat ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 IL2 Il2 NUM CD NumType=Card _ _ _ _ 7 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 8 region region NOUN NN Number=Sing _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 multimer multimer NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 AT at NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 binding binding VERB VBG VerbForm=Ger _ _ _ _ 20 site site NOUN NN Number=Sing _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 markedly markedly ADV RB _ _ _ _ _ 23 lower lower ADJ JJR Degree=Cmp _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 patient patient NOUN NN Number=Sing _ _ _ _ 27 relative relative ADV RB _ _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 controls control NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5444 # text = In contrast, CAT gene expression directed by a multimer of the OCT-1 proximal (OCT-1p)-binding site was equivalent in patient and controls. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 CAT cat ADJ JJ Degree=Pos _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 multimer multimer NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 OCT Oct NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 proximal proximal NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 OCT Oct NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 p p NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 binding binding VERB VBG VerbForm=Ger _ _ _ _ 24 site site NOUN NN Number=Sing _ _ _ _ 25 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 26 equivalent equivalent ADJ JJ Degree=Pos _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 patient patient NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 controls control NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 5445 # text = These results indicate that an abnormality of/or influencing NF-AT may underlie the multiple lymphokine deficiency in this patient. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 abnormality abnormality NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 or or CCONJ CC _ _ _ _ _ 10 influencing influence VERB VBG VerbForm=Ger _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 AT AT PROPN NNP Number=Sing _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 underlie underlie VERB VB VerbForm=Inf _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 18 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 19 deficiency deficiency NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 22 patient patient NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5446 # text = Document 003001342 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001342 003001342 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5447 # text = Oncogenic forms of NOTCH1 lacking either the primary binding site for RBP-Jkappa or nuclear localization sequences retain the ability to associate with RBP-Jkappa and activate transcription. 1 Oncogenic Oncogenic ADJ JJ Degree=Pos _ _ _ _ 2 forms form NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NOTCH1 Notch1 PROPN NNP Number=Sing _ _ _ _ 5 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 6 either either CCONJ CC _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 primary primary ADJ JJ Degree=Pos _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 site site NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 RBP RBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 Jkappa Jkappa PROPN NNP Number=Sing _ _ _ _ 15 or or CCONJ CC _ _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 localization localization NOUN NN Number=Sing _ _ _ _ 18 sequences sequence NOUN NNS Number=Plur _ _ _ _ 19 retain retain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 ability ability NOUN NN Number=Sing _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 associate associate VERB VB VerbForm=Inf _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 RBP RBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 Jkappa Jkappa PROPN NNP Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 activate activate ADJ JJ Degree=Pos _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5448 # text = Truncated forms of the NOTCH1 transmembrane receptor engineered to resemble mutant forms of NOTCH1 found in certain cases of human T cell leukemia/lymphoma (T-ALL) efficiently induce T-ALL when expressed in the bone marrow of mice. 1 Truncated Truncated ADJ JJ Degree=Pos _ _ _ _ 2 forms form NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 NOTCH1 Notch1 PROPN NNP Number=Sing _ _ _ _ 6 transmembrane transmembrane NOUN NN Number=Sing _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 engineered engineer VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 resemble resemble VERB VB VerbForm=Inf _ _ _ _ 11 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 12 forms form NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NOTCH1 Notch1 PROPN NNP Number=Sing _ _ _ _ 15 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 certain certain ADJ JJ Degree=Pos _ _ _ _ 18 cases cas NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 T T PROPN NNP Number=Sing _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 leukemia/ leukemiaith PUNCT HYPH _ _ _ _ SpaceAfter=No 24 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 T T PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 ALL All PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 efficiently efficiently ADV RB _ _ _ _ _ 31 induce induce ADJ JJ Degree=Pos _ _ _ _ 32 T t PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 ALL all ADV RB _ _ _ _ _ 35 when when ADV WRB PronType=Int _ _ _ _ 36 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 bone bone NOUN NN Number=Sing _ _ _ _ 40 marrow marrow NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 5449 # text = Unlike full-sized NOTCH1, two such truncated forms of the protein either lacking a major portion of the extracellular domain (DeltaE) or consisting only of the intracellular domain (ICN) were found to activate transcription in cultured cells, presumably through RBP-Jkappa response elements within DNA. 1 Unlike unlike ADP IN _ _ _ _ _ 2 full full ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 sized size VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 NOTCH1 Notch1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 such such ADJ JJ Degree=Pos _ _ _ _ 9 truncated truncated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 forms form NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 either either CCONJ CC _ _ _ _ _ 15 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 major major ADJ JJ Degree=Pos _ _ _ _ 18 portion portion NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 22 domain domain NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 DeltaE DeltaE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 consisting consist VERB VBG VerbForm=Ger _ _ _ _ 28 only only ADV RB _ _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 32 domain domain NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 ICN ICN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 37 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 to to PART TO _ _ _ _ _ 39 activate activate VERB VB VerbForm=Inf _ _ _ _ 40 transcription transcription NOUN NN Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 cultured cultured ADJ JJ Degree=Pos _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 presumably presumably ADV RB _ _ _ _ _ 46 through through ADP IN _ _ _ _ _ 47 RBP RBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 Jkappa Jkappa PROPN NNP Number=Sing _ _ _ _ 50 response response NOUN NN Number=Sing _ _ _ _ 51 elements element NOUN NNS Number=Plur _ _ _ _ 52 within within ADP IN _ _ _ _ _ 53 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 5450 # text = Both truncated forms also bound to the transcription factor RBP-Jkappa in extracts prepared from human and murine T-ALL cell lines. 1 Both both DET DT _ _ _ _ _ 2 truncated truncated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 forms form NOUN NNS Number=Plur _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 bound bound ADJ JJ Degree=Pos _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 RBP RBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 Jkappa Jkappa PROPN NNP Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 extracts extract NOUN NNS Number=Plur _ _ _ _ 15 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 from from ADP IN _ _ _ _ _ 17 human human NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 murine murine NOUN NN Number=Sing _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 ALL all DET DT _ _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5451 # text = Transcriptional activation required the presence of a weak RBP-Jkappa-binding site within the NOTCH1 ankyrin repeat region of the intracellular domain. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 required require VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 presence presence NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 weak weak ADJ JJ Degree=Pos _ _ _ _ 9 RBP RBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 Jkappa Jkappa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ _ 15 within within ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 NOTCH1 Notch1 NOUN NN Number=Sing _ _ _ _ 18 ankyrin ankyrin ADP IN _ _ _ _ _ 19 repeat repeat ADJ JJ Degree=Pos _ _ _ _ 20 region region NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 24 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5452 # text = Unexpectedly, a second, stronger RBP-Jkappa-binding site, which lies within the intracellular domain close to the transmembrane region and significantly augments association with RBP-Jkappa, was not needed for oncogenesis or for transcriptional activation. 1 Unexpectedly unexpectedly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 stronger stronger ADJ JJR Degree=Cmp _ _ _ _ 7 RBP RBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Jkappa Jkappa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 lies lie VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 within within ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 19 domain domain NOUN NN Number=Sing _ _ _ _ 20 close close ADJ JJ Degree=Pos _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 transmembrane transmembrane NOUN NN Number=Sing _ _ _ _ 24 region region NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 significantly significantly ADV RB _ _ _ _ _ 27 augments augment NOUN NNS Number=Plur _ _ _ _ 28 association association NOUN NN Number=Sing _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 RBP RBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 Jkappa Jkappa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 35 not not PART RB _ _ _ _ _ 36 needed need VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 oncogenesis oncogenesis PRON DT Number=Sing|PronType=Dem _ _ _ _ 39 or or CCONJ CC _ _ _ _ _ 40 for for ADP IN _ _ _ _ _ 41 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 42 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 5453 # text = While ICN appeared primarily in the nucleus, DeltaE localized to cytoplasmic and nuclear membranes, suggesting that intranuclear localization is not essential for oncogenesis or transcriptional activation. 1 While while SCONJ IN _ _ _ _ _ 2 ICN ICN PROPN NNP Number=Sing _ _ _ _ 3 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 primarily primarily ADV RB _ _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 DeltaE DeltaE PROPN NNP Number=Sing _ _ _ _ 10 localized localize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 membranes membrane NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 intranuclear intranuclear ADJ JJ Degree=Pos _ _ _ _ 20 localization localization NOUN NN Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 essential essential ADJ JJ Degree=Pos _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 oncogenesis oncogenesis ADJ JJ Degree=Pos _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5454 # text = In support of this interpretation, mutation of putative nuclear localization sequences decreased nuclear localization and increased transcriptional activation by membrane-bound DeltaE. 1 In in ADP IN _ _ _ _ _ 2 support support NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 interpretation interpretation NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 mutation mutation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 putative putative ADJ JJ Degree=Pos _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 localization localization NOUN NN Number=Sing _ _ _ _ 12 sequences sequence NOUN NNS Number=Plur _ _ _ _ 13 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 localization localization NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 membrane membrane NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 bound bound ADJ JJ Degree=Pos _ _ _ _ 24 DeltaE Delta NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5455 # text = Transcriptional activation by this mutant form of membrane-bound DeltaE was approximately equivalent to that produced by intranuclear ICN. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 6 form form NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 membrane membrane NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 bound bound ADJ JJ Degree=Pos _ _ _ _ 11 DeltaE DeltaE PROPN NNP Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 approximately approximately ADV RB _ _ _ _ _ 14 equivalent equivalent ADJ JJ Degree=Pos _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 17 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 intranuclear intranuclear ADJ JJ Degree=Pos _ _ _ _ 20 ICN Icn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5456 # text = These data are most consistent with NOTCH1 oncogenesis and transcriptional activation being independent of association with RBP-Jkappa at promoter sites. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 most most ADV RBS _ _ _ _ _ 5 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 NOTCH1 Notch1 PROPN NNP Number=Sing _ _ _ _ 8 oncogenesis oncogenesis PROPN NNPS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 being be AUX VBG VerbForm=Ger _ _ _ _ 13 independent independent ADJ JJ Degree=Pos _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 association association NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 RBP RBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 Jkappa Jkappa PROPN NNP Number=Sing _ _ _ _ 20 at at ADP IN _ _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5457 # text = Document 003001344 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001344 003001344 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5458 # text = Impaired induction of c-fos/c-jun genes and of transcriptional regulatory proteins binding distinct c-fos/c-jun promoter elements in activated human T cells during aging. 1 Impaired Impaired VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 c- c- SYM NFP _ _ _ _ SpaceAfter=No 5 fos/c-jun fos/c-jun ADJ JJ Degree=Pos _ _ _ _ 6 genes gene NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 10 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 binding bind VERB VBG VerbForm=Ger _ _ _ _ 13 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 14 c-fos/c-jun c-fos/c-jun NOUN NN Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 elements element NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 during during ADP IN _ _ _ _ _ 23 aging aging NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5459 # text = The activation of transcriptional factor c-Fos/c-Jun AP-1 is essential for normal T cell responsiveness and is often impaired in T cells during aging. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 c-Fos/c c-Fos/c PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 -Jun -Jun PROPN NNP Number=Sing _ _ _ _ 8 AP ap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 essential essential ADJ JJ Degree=Pos _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 normal normal ADJ JJ Degree=Pos _ _ _ _ 15 T T PROPN NNP Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 often often ADV RB _ _ _ _ _ 21 impaired impaire VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 during during ADP IN _ _ _ _ _ 26 aging aging NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5460 # text = In the present study, we investigated whether aberrancies in the regulation of c-fos/c-jun at the mRNA or protein level might underlie the age-associated impairments of AP-1 in human T cells. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 whether whether SCONJ IN _ _ _ _ _ 9 aberrancies aberrancy NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 regulation regulation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 c- c- SYM NFP _ _ _ _ SpaceAfter=No 15 fos/c-jun fos/c-jun VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 at at ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 level level NOUN NN Number=Sing _ _ _ _ 22 might might AUX MD VerbForm=Fin _ _ _ _ 23 underlie underlie VERB VB VerbForm=Inf _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 age- age- SYM NFP _ _ _ _ SpaceAfter=No 26 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 impairments impairment NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 human human ADJ JJ Degree=Pos _ _ _ _ 34 T T PROPN NNP Number=Sing _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 5461 # text = Whereas T cells from young subjects stimulated with cross-linked anti-CD3epsilon mAb OKT3 plus PMA or with the lectin PHA plus PMA demonstrated considerable increases in c-Fos protein expression, the expression of c-Fos but not c-Jun was markedly reduced in stimulated T cells from certain elderly subjects. 1 Whereas whereas SCONJ IN _ _ _ _ _ 2 T t PROPN NNP Number=Sing _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 young young ADJ JJ Degree=Pos _ _ _ _ 6 subjects subjects NOUN NNS Number=Plur _ _ _ _ 7 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 -linked -link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 13 mAb mAb PROPN NNP Number=Sing _ _ _ _ 14 OKT3 OKT3 NUM CD NumType=Card _ _ _ _ 15 plus plus CCONJ CC _ _ _ _ _ 16 PMA PMA PROPN NNP Number=Sing _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 lectin lectin PROPN NNP Number=Sing _ _ _ _ 21 PHA PHA PROPN NNP Number=Sing _ _ _ _ 22 plus plus CCONJ CC _ _ _ _ _ 23 PMA PMA PROPN NNP Number=Sing _ _ _ _ 24 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 considerable considerable ADJ JJ Degree=Pos _ _ _ _ 26 increases increase NOUN NNS Number=Plur _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 Fos Fos PROPN NNP Number=Sing _ _ _ _ 31 protein protein NOUN NN Number=Sing _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 Fos Fos NOUN NNS Number=Plur _ _ _ _ 40 but but CCONJ CC _ _ _ _ _ 41 not not ADV RB _ _ _ _ _ 42 c- c- SYM NFP _ _ _ _ SpaceAfter=No 43 Jun Jun PROPN NNP Number=Sing _ _ _ _ 44 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 45 markedly markedly ADV RB _ _ _ _ _ 46 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 49 T t PROPN NNP Number=Sing _ _ _ _ 50 cells cell NOUN NNS Number=Plur _ _ _ _ 51 from from ADP IN _ _ _ _ _ 52 certain certain ADJ JJ Degree=Pos _ _ _ _ 53 elderly elderly ADJ JJ Degree=Pos _ _ _ _ 54 subjects subject NOUN NNS Number=Plur _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 5462 # text = In addition, 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ # sent_id = 5463 # text = RNase protection assays revealed that anti-CD3/PMA-stimulated T cells from a substantial proportion of elderly subjects exhibited decreased levels of c-fos and/or c-jun mRNA compared to T cells from young subjects. 1 RNase RNase NOUN NN Number=Sing _ _ _ _ 2 protection protection NOUN NN Number=Sing _ _ _ _ 3 assays assays NOUN NNS Number=Plur _ _ _ _ 4 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 anti-CD3/PMA anti-CD3/PMa ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 substantial substantial ADJ JJ Degree=Pos _ _ _ _ 14 proportion proportion NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 elderly elderly ADJ JJ Degree=Pos _ _ _ _ 17 subjects subjects NOUN NNS Number=Plur _ _ _ _ 18 exhibited exhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 levels level NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 fos fo NOUN NNS Number=Plur _ _ _ _ 25 and and CCONJ CC _ _ _ _ SpaceAfter=No 26 / / PUNCT , _ _ _ _ SpaceAfter=No 27 or or CCONJ CC _ _ _ _ _ 28 c- c- SYM SYM _ _ _ _ SpaceAfter=No 29 jun jun ADJ JJ Degree=Pos _ _ _ _ 30 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 31 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 T t PROPN NNP Number=Sing _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ _ 35 from from ADP IN _ _ _ _ _ 36 young young ADJ JJ Degree=Pos _ _ _ _ 37 subjects subjects NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 5464 # text = Using electrophoretic mobility shift assays, the levels of nuclear regulatory proteins recognizing the AP-1 consensus TRE motif, the proximal c-jun TRE-like promoter element, and the c-fos serum response element (SRE) were determined in resting and stimulated T cells. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 3 mobility mobility NOUN NN Number=Sing _ _ _ _ 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assays assays ADV RB _ _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 12 proteins protein NOUN NNS Number=Plur _ _ _ _ 13 recognizing recognize VERB VBG VerbForm=Ger _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 consensus consensus NOUN NN Number=Sing _ _ _ _ 19 TRE Tre NOUN NN Number=Sing _ _ _ _ 20 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 24 c- c- SYM NFP _ _ _ _ SpaceAfter=No 25 jun jun VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 TRE Tre ADV RB _ _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 like like ADJ JJ Degree=Pos _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ _ 30 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 fos fos NOUN NN Number=Sing _ _ _ _ 37 serum serum NOUN NN Number=Sing _ _ _ _ 38 response response NOUN NN Number=Sing _ _ _ _ 39 element element NOUN NN Number=Sing _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 SRE SRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 44 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 resting rest VERB VBG VerbForm=Ger _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 49 T t PROPN NNP Number=Sing _ _ _ _ 50 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 5465 # text = Although the stimulation of T cells from young subjects resulted in coordinated increases of nuclear protein complexes binding the AP-1 TRE, c-jun TRE, and c-fos SRE DNA sequence motifs, age-related reductions in the activation of AP-1 were accompanied by decreased levels of c-jun TRE and c-fos SRE binding complexes. 1 Although although SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 young young ADJ JJ Degree=Pos _ _ _ _ 9 subjects subjects NOUN NNS Number=Plur _ _ _ _ 10 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 coordinated coordinate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 increases increase NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 complexes complex NOUN NNS Number=Plur _ _ _ _ 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 TRE Tre NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 c- c- SYM NFP _ _ _ _ SpaceAfter=No 26 jun jun NOUN NN Number=Sing _ _ _ _ 27 TRE Tre NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 c- c- SYM NFP _ _ _ _ SpaceAfter=No 31 fos fo NOUN NNS Number=Plur _ _ _ _ 32 SRE Sre ADJ JJ Degree=Pos _ _ _ _ 33 DNA dna NOUN NN Number=Sing _ _ _ _ 34 sequence sequence NOUN NN Number=Sing _ _ _ _ 35 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 age age NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 related related ADJ JJ Degree=Pos _ _ _ _ 40 reductions reduction NOUN NNS Number=Plur _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 activation activation NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT , _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ _ 48 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 49 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 50 by by ADP IN _ _ _ _ _ 51 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 52 levels level NOUN NNS Number=Plur _ _ _ _ 53 of of ADP IN _ _ _ _ _ 54 c- c- SYM NFP _ _ _ _ SpaceAfter=No 55 jun jun NOUN NN Number=Sing _ _ _ _ 56 TRE tre NOUN NN Number=Sing _ _ _ _ 57 and and CCONJ CC _ _ _ _ _ 58 c- c- PUNCT , _ _ _ _ SpaceAfter=No 59 fos fo NOUN NNS Number=Plur _ _ _ _ 60 SRE Sre AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 61 binding binding VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 62 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 63 . . PUNCT . _ _ _ _ _ # sent_id = 5466 # text = Furthermore, the nuclear protein complexes binding the SRE motif induced in activated T cells of young and elderly subjects contained serum response factor and Elk-1 pointing toward age-related defects in the activation of transcriptional regulatory proteins distinct from c-jun/AP-1. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 complexes complex NOUN NNS Number=Plur _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 SRE SRE PROPN NNP Number=Sing _ _ _ _ 10 motif motif NOUN NN Number=Sing _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 young young ADJ JJ Degree=Pos _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 elderly elderly ADJ JJ Degree=Pos _ _ _ _ 20 subjects subject NOUN NNS Number=Plur _ _ _ _ 21 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 serum serum NOUN NN Number=Sing _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 Elk elk NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 pointing point VERB VBG VerbForm=Ger _ _ _ _ 30 toward toward ADP IN _ _ _ _ _ 31 age age NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 related related ADJ JJ Degree=Pos _ _ _ _ 34 defects defect NOUN NNS Number=Plur _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 activation activation NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 40 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 41 proteins protein NOUN NNS Number=Plur _ _ _ _ 42 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 43 from from ADP IN _ _ _ _ _ 44 c- c- SYM NFP _ _ _ _ SpaceAfter=No 45 jun/AP jun/AP NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 5467 # text = These results suggest that underlying aberrancies in the induction of c-fos/c-jun as well as their nuclear regulatory proteins may contribute to the age-related impairments of AP-1 activation in human T cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 underlying underlying ADJ JJ Degree=Pos _ _ _ _ 6 aberrancies aberrancy NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 c- c- SYM NFP _ _ _ _ SpaceAfter=No 12 fos/c-jun fos/c-jun ADJ JJ Degree=Pos _ _ _ _ 13 as as ADV RB _ _ _ _ _ 14 well well ADV RB Degree=Pos _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 19 proteins protein NOUN NNS Number=Plur _ _ _ _ 20 may may AUX MD VerbForm=Fin _ _ _ _ 21 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 age age NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 related related ADJ JJ Degree=Pos _ _ _ _ 27 impairments impairment NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 human human ADJ JJ Degree=Pos _ _ _ _ 35 T t PROPN NNP Number=Sing _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5468 # text = Document 003001359 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001359 003001359 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5469 # text = Effects of alpha-lipoic acid and dihydrolipoic acid on expression of proto-oncogene c-fos. 1 Effects Effects NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 lipoic lipoic ADJ JJ Degree=Pos _ _ _ _ 6 acid acid NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 dihydrolipoic dihydrolipoic ADJ JJ Degree=Pos _ _ _ _ 9 acid acid NOUN NN Number=Sing _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 oncogene oncogene NOUN NN Number=Sing _ _ _ _ 16 c- c- PUNCT : _ _ _ _ SpaceAfter=No 17 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5470 # text = The transcription factor AP-1 is an important human mediator of the cellular response to serum, growth factors, and phorbol esters such as 12-O-tetradecanoyl-phorbol-13 acetate (TPA). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 important important ADJ JJ Degree=Pos _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 mediator mediator NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 15 response response NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 serum serum NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 growth growth NOUN NN Number=Sing _ _ _ _ 20 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 24 esters ester NOUN NNS Number=Plur _ _ _ _ 25 such such ADJ JJ Degree=Pos _ _ _ _ 26 as as ADP IN _ _ _ _ _ 27 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 - - SYM SYM _ _ _ _ SpaceAfter=No 29 O of ADP IN Abbr=Yes _ _ _ SpaceAfter=No 30 -tetradecanoyl-phorbol-13 -tetradecanoyl-phorbol-13 NUM CD NumType=Card _ _ _ _ 31 acetate acetate NOUN NN Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 TPA TPA NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 5471 # text = The AP-1 complex consists of distinct protein heterodimers encoded by the proto-oncogene c-fos and c-jun mRNA whose gene expression can be induced by TPA, cyclic AMP and growth factors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 complex complex NOUN NN Number=Sing _ _ _ _ 6 consists consist NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 11 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 -oncogene -oncogene NOUN NN Number=Sing _ _ _ _ 16 c- c- PUNCT : _ _ _ _ SpaceAfter=No 17 fos fo NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 c- c- SYM NFP _ _ _ _ SpaceAfter=No 20 jun jun NOUN NN Number=Sing _ _ _ _ 21 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 22 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 can can AUX MD VerbForm=Fin _ _ _ _ 26 be be AUX VB VerbForm=Inf _ _ _ _ 27 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 cyclic cyclic ADJ JJ Degree=Pos _ _ _ _ 32 AMP Amp NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 growth growth NOUN NN Number=Sing _ _ _ _ 35 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 5472 # text = Recent findings suggest an involvement of reactive oxygen species in the pathway of TPA and protein kinase C leading to expression of c-fos and c-jun mRNA. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 involvement involvement NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 8 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 9 species species NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 pathway pathway NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 TPA TPa NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 kinase kinase NOUN NN Number=Sing _ _ _ _ 18 C c PROPN NNP Number=Sing _ _ _ _ 19 leading lead VERB VBG VerbForm=Ger _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 fos fo NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 c- c- SYM NFP _ _ _ _ SpaceAfter=No 28 jun jun PROPN NNP Number=Sing _ _ _ _ 29 mRNA mRNa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5473 # text = To investigate the role of reactive oxygen species we studied the effects of alpha-lipoic acid and dihydrolipoic acid (natural thiol antioxidants) on the expression of c-fos mRNA in human Jurkat T cells. 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 7 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 8 species species NOUN NNS Number=Plur _ _ _ _ 9 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 10 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 effects effect NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 lipoic lipoic ADJ JJ Degree=Pos _ _ _ _ 17 acid acid NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 dihydrolipoic dihydrolipoic ADJ JJ Degree=Pos _ _ _ _ 20 acid acid NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 natural natural ADJ JJ Degree=Pos _ _ _ _ 23 thiol thiol NOUN NN Number=Sing _ _ _ _ 24 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 fos fos NOUN NNS Number=Plur _ _ _ _ 33 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 human human ADJ JJ Degree=Pos _ _ _ _ 36 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 37 T t PROPN NNP Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 5474 # text = When cells were preincubated with dihydrolipoic acid (0.2 mM) the expression of c-fos mRNA was suppressed at 30 min after stimulation of TPA (0.5 microM) whereas in the case of preincubation of alpha-lipoic acid (0.2 microM), the expression was enhanced at 30 min. 1 When when ADV WRB PronType=Int _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 preincubated preincubate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 dihydrolipoic dihydrolipoic ADJ JJ Degree=Pos _ _ _ _ 7 acid acid NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 0.2 0.2 NUM CD NumType=Card _ _ _ _ 10 mM mm NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 fos fos NOUN NNS Number=Plur _ _ _ _ 18 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 at at ADP IN _ _ _ _ _ 22 30 30 NUM CD NumType=Card _ _ _ _ 23 min min NOUN NNS Number=Plur _ _ _ _ 24 after after ADP IN _ _ _ _ _ 25 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 TPA TPA PROPN NNP Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 0.5 0.5 NUM CD NumType=Card _ _ _ _ 30 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 whereas wherea NOUN NNS Number=Plur _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 case case NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 preincubation preincubation NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 lipoic lipoic ADJ JJ Degree=Pos _ _ _ _ 42 acid acid NOUN NN Number=Sing _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 0.2 0.2 NUM CD NumType=Card _ _ _ _ 45 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 expression expression NOUN NN Number=Sing _ _ _ _ 50 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 51 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 52 at at ADP IN _ _ _ _ _ 53 30 30 NUM CD NumType=Card _ _ _ _ 54 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 5475 # text = These studies support the idea that superoxide anion radical plays a role in the expression of c-fos mRNA. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 support support VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 idea idea NOUN NN Number=Sing _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 superoxide superoxide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 anion anion NOUN NN Number=Sing _ _ _ _ 9 radical radical ADJ JJ Degree=Pos _ _ _ _ 10 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 fos fo NOUN NNS Number=Plur _ _ _ _ 20 mRNA. mRNA. NOUN NN Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5476 # text = Document 003001363 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001363 003001363 NUM CD NumType=Card _ _ _ _ 3 ends. ends. NOUN NN Number=Sing _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5477 # text = SLP-76 and Vav function in separate, but overlapping pathways to augment interleukin-2 promoter activity. 1 SLP Slp SYM NFP _ _ _ _ SpaceAfter=No 2 -76 -76 NUM CD NumType=Card _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 Vav Vav PROPN NNP Number=Sing _ _ _ _ 5 function function NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 separate separate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 overlapping overlapp ADJ JJ Degree=Pos _ _ _ _ 11 pathways pathway NOUN NNS Number=Plur _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 augment augment NOUN NN Number=Sing _ _ _ _ 14 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5478 # text = SLP-76 and Vav, two hematopoietic cell specific molecules, are critical for T cell development and activation. 1 SLP Slp SYM NFP _ _ _ _ SpaceAfter=No 2 -76 -76 NUM CD NumType=Card _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 Vav Vav PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 two two NUM CD NumType=Card _ _ _ _ 7 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 critical critical ADJ JJ Degree=Pos _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 development development NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 5479 # text = Following 1 Following follow VERB VBG VerbForm=Ger _ _ _ _ # sent_id = 5480 # text = T cell antigen receptor stimulation, SLP-76 and Vav both undergo tyrosine phosphorylation and associate with each other via the SH2 domain of Vav and phosphorylated tyrosines of SLP-76. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cell cell VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ _ 5 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 SLP SLP NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 76 76 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 Vav Vav PROPN NNP Number=Sing _ _ _ _ 12 both both CCONJ CC _ _ _ _ _ 13 undergo undergo ADJ JJ Degree=Pos _ _ _ _ 14 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 15 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 associate associate NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 each each DET DT _ _ _ _ _ 20 other other ADJ JJ Degree=Pos _ _ _ _ 21 via via ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 SH2 Sh2 NOUN NN Number=Sing _ _ _ _ 24 domain domain NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 Vav Vav PROPN NNP Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 tyrosines tyrosine NOUN NNS Number=Plur _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 SLP SLP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 76 76 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 5481 # text = Furthermore, SLP-76 and Vav have a synergistic effect on interleukin (IL)-2 promoter activity in T cells. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 SLP SLP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 76 76 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 Vav Vav PROPN NNP Number=Sing _ _ _ _ 8 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 11 effect effect NOUN NN Number=Sing _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5482 # text = In this report, we show that two tyrosines, Tyr-113 and Tyr-128, of SLP-76 are required for its binding to Vav, both in vitro and in intact cells. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 two two NUM CD NumType=Card _ _ _ _ 9 tyrosines tyrosine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 Tyr Tyr NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 113 113 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 Tyr Tyr NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 -128 -128 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 SLP sLp NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 76 76 NUM CD NumType=Card _ _ _ _ 22 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 for for SCONJ IN _ _ _ _ _ 25 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 26 binding bind VERB VBG VerbForm=Ger _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 Vav Vav PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 both both CCONJ CC _ _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 vitro vitro NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 intact intact ADJ JJ Degree=Pos _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 5483 # text = Surprisingly, we find also that the interaction between SLP-76 and Vav is not required for their cooperation in augmenting IL-2 promoter activity, as the two molecules appear to function in different signaling pathways upstream of IL-2 gene expression. 1 Surprisingly surprisingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 find find VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 interaction interaction NOUN NN Number=Sing _ _ _ _ 9 between between ADP IN _ _ _ _ _ 10 SLP SLP NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 76 76 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 Vav Vav PROPN NNP Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 cooperation cooperation NOUN NN Number=Sing _ _ _ _ 21 in in SCONJ IN _ _ _ _ _ 22 augmenting augment VERB VBG VerbForm=Ger _ _ _ _ 23 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ _ 26 promoter promoter NOUN NN Number=Sing _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 as as SCONJ IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 two two NUM CD NumType=Card _ _ _ _ 32 molecules molecule NOUN NNS Number=Plur _ _ _ _ 33 appear appear VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 to to PART TO _ _ _ _ _ 35 function function VERB VB VerbForm=Inf _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 different different ADJ JJ Degree=Pos _ _ _ _ 38 signaling signaling NOUN NN Number=Sing _ _ _ _ 39 pathways pathway NOUN NNS Number=Plur _ _ _ _ 40 upstream upstream NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 2 2 NUM CD NumType=Card _ _ _ _ 45 gene gene NOUN NN Number=Sing _ _ _ _ 46 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 5484 # text = Overexpression of SLP-76 in the Jurkat T cell line potentiates the activities of both nuclear factor of activated T cells and AP-1 transcription factors. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 SLP SLP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 76 76 NUM CD NumType=Card _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 9 T T PROPN NNP Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 line line NOUN NN Number=Sing _ _ _ _ 12 potentiates potentiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 activities activity NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 both both DET DT _ _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5485 # text = In contrast, overexpression of Vav leads to enhanced nuclear factor of activated T cells activity without affecting AP-1. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 Vav Vav PROPN NNP Number=Sing _ _ _ _ 7 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 enhanced enhance VERB VB VerbForm=Inf _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 without without SCONJ IN _ _ _ _ _ 18 affecting affect VERB VBG VerbForm=Ger _ _ _ _ 19 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5486 # text = Additionally, overexpression of Vav, but not SLP-76, augments CD28-induced IL-2 promoter activity. 1 Additionally additionally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Vav Vav PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 but but CCONJ CC _ _ _ _ _ 8 not not ADV RB _ _ _ _ _ 9 SLP sLp NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT : _ _ _ _ SpaceAfter=No 11 76 76 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 augments augment NOUN NNS Number=Plur _ _ _ _ 14 CD28 CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 -induced -induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5487 # text = These findings suggest that the synergy between SLP-76 and Vav in regulating IL-2 gene expression reflects the cooperation between different signaling pathways. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 synergy synergy NOUN NN Number=Sing _ _ _ _ 7 between between ADP IN _ _ _ _ _ 8 SLP SLP NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 76 76 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 Vav Vav PROPN NNP Number=Sing _ _ _ _ 13 in in SCONJ IN _ _ _ _ _ 14 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 reflects reflect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 cooperation cooperation NOUN NN Number=Sing _ _ _ _ 23 between between ADP IN _ _ _ _ _ 24 different different ADJ JJ Degree=Pos _ _ _ _ 25 signaling signaling NOUN NN Number=Sing _ _ _ _ 26 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5488 # text = Document 003001365 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001365 003001365 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5489 # text = Human immunodeficiency virus type-2 gene expression: two enhancers and their activation by T-cell activators. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 3 virus virus NOUN NN Number=Sing _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 : : PUNCT : _ _ _ _ _ 10 two two NUM CD NumType=Card _ _ _ _ 11 enhancers enhancer NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 activators activator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5490 # text = The human immunodeficiency viruses (HIVs) may include a spectrum of retroviruses with varying potential to infect their host, undergo long periods of latent infection, and induce pathology. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 4 viruses viruse NOUN NNS Number=Plur _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 HIVs HIV NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 may may AUX MD VerbForm=Fin _ _ _ _ 9 include include VERB VB VerbForm=Inf _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 spectrum spectrum NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 retroviruses retroviruse NOUN NNS Number=Plur _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 varying vary NOUN NN Number=Sing _ _ _ _ 16 potential potential NOUN NN Number=Sing _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 infect infect VERB VB VerbForm=Inf _ _ _ _ 19 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 host host NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 undergo undergo ADV RB _ _ _ _ _ 23 long long ADJ JJ Degree=Pos _ _ _ _ 24 periods periods NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 latent latent ADJ JJ Degree=Pos _ _ _ _ 27 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 induce induce ADJ JJ Degree=Pos _ _ _ _ 31 pathology pathology NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 5491 # text = Since expression of the viruses is in large part regulated by the sequence elements in their long terminal repeats (LTRs), this study was directed to an analysis of the regulatory elements in the HIV-2 LTR. 1 Since since ADP IN _ _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 viruses viruse NOUN NNS Number=Plur _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 large large ADJ JJ Degree=Pos _ _ _ _ 9 part part NOUN NN Number=Sing _ _ _ _ 10 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 sequence sequence NOUN NN Number=Sing _ _ _ _ 14 elements element NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 17 long long ADJ JJ Degree=Pos _ _ _ _ 18 terminal terminal NOUN NN Number=Sing _ _ _ _ 19 repeats repeat NOUN NNS Number=Plur _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 LTRs LTR NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 25 study study NOUN NN Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 directed direct VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 analysis analysis NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 34 elements element NOUN NNS Number=Plur _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 2 2 NUM CD NumType=Card _ _ _ _ 40 LTR Ltr NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 5492 # text = The HIV-2 LTR was found to contain two enhancers. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 LTR Ltr NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 contain contain VERB VB VerbForm=Inf _ _ _ _ 10 two two NUM CD NumType=Card _ _ _ _ 11 enhancers enhancer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 5493 # text = One of these enhancers is, in part, identical to the HIV-1 enhancer. 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 enhancers enhancer NOUN NNS Number=Plur _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 part part ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 identical identical ADJ JJ Degree=Pos _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 5494 # text = This enhancer in HIV-1 is the T-cell activation response element; in HIV-2, however, it is the second enhancer that is mainly responsible for activation in response to T-cell activators. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 response response NOUN NN Number=Sing _ _ _ _ 13 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ; ; PUNCT , _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 however however ADV RB _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 26 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 27 that that PRON WDT PronType=Rel _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 mainly mainly ADV RB _ _ _ _ _ 30 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 response response NOUN NN Number=Sing _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 activators activator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 5495 # text = The second enhancer interacts with two nuclear binding proteins (85 kD and 27 kD mobility) that appear to be required for optimal enhancer function and activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 4 interacts interact NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 two two NUM CD NumType=Card _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 binding binding NOUN NN Number=Sing _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 85 85 NUM CD NumType=Card _ _ _ _ 12 kD kD NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 27 27 NUM CD NumType=Card _ _ _ _ 15 kD kd NOUN NN Number=Sing _ _ _ _ 16 mobility mobility NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 appear appear VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 25 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 26 function function NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5496 # text = Observations such as these encourage the speculation that there may be subtle differences in the regulation of HIV-1 and HIV-2 expression that may be relevant to the possible longer latency and reduced pathogenicity of HIV-2. 1 Observations observation NOUN NNS Number=Plur _ _ _ _ 2 such such ADJ JJ Degree=Pos _ _ _ _ 3 as as ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 encourage encourage NOUN NN Number=Sing _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 speculation speculation NOUN NN Number=Sing _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 there there PRON EX _ _ _ _ _ 10 may may AUX MD VerbForm=Fin _ _ _ _ 11 be be VERB VB VerbForm=Inf _ _ _ _ 12 subtle subtle ADJ JJ Degree=Pos _ _ _ _ 13 differences difference NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 regulation regulation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 that that PRON WDT PronType=Rel _ _ _ _ 27 may may AUX MD VerbForm=Fin _ _ _ _ 28 be be AUX VB VerbForm=Inf _ _ _ _ 29 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 possible possible ADJ JJ Degree=Pos _ _ _ _ 33 longer longer ADV RBR Degree=Cmp _ _ _ _ 34 latency latency ADV RB _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 pathogenicity pathogenicity NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5497 # text = Document 003001371 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001371 003001371 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5498 # text = Engagement of the Lewis X antigen (CD15) results in monocyte activation. 1 Engagement engagement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 Lewis Lewis PROPN NNP Number=Sing _ _ _ _ 5 X X PROPN NNP Number=Sing _ _ _ _ 6 antigen antigen NUM CD NumType=Card _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 CD15 CD15 NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 results result NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 monocyte monocyte ADJ JJ Degree=Pos _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5499 # text = We previously reported that monocyte adhesion to tumor necrosis factor-alpha (TNF-alpha)-treated endothelial cells increased expression of tissue factor and CD36 on monocytes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 previously previously ADV RB _ _ _ _ _ 3 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 6 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 tumor tumor NOUN NN Number=Sing _ _ _ _ 9 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 alpha alpha NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 - - PUNCT : _ _ _ _ SpaceAfter=No 19 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 tissue tissue NOUN NN Number=Sing _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 CD36 Cd36 NOUN NN Number=Sing _ _ _ _ 29 on on ADP IN _ _ _ _ _ 30 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 5500 # text = Using immunological cross-linking to mimic receptor engagement by natural ligands, we now show that CD15 (Lewis X), a monocyte counter-receptor for endothelial selectins may participate in this response. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 immunological immunological ADJ JJ Degree=Pos _ _ _ _ 3 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 mimic mimic ADJ JJ Degree=Pos _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 engagement engagement NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 natural natural ADJ JJ Degree=Pos _ _ _ _ 11 ligands ligand NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 now now ADV RB _ _ _ _ _ 15 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 15 15 NUM CD NumType=Card _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 Lewis Lewis PROPN NNP Number=Sing _ _ _ _ 21 X X PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 26 counter counter NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 receptor receptor NOUN NN Number=Sing _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 31 selectins selectin NOUN NNS Number=Plur _ _ _ _ 32 may may AUX MD VerbForm=Fin _ _ _ _ 33 participate participate VERB VB VerbForm=Inf _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 36 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 5501 # text = We used cytokine production as a readout for monocyte activation and found that CD15 cross-linking induced TNF-alpha release from peripheral blood monocytes and cells from the monocytic cell line MM6. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 4 production production NOUN NN Number=Sing _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 readout readout NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 15 15 NUM CD NumType=Card _ _ _ _ 16 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 18 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 alpha alpha NOUN NN Number=Sing _ _ _ _ 22 release release NOUN NN Number=Sing _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 25 blood blood NOUN NN Number=Sing _ _ _ _ 26 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 from from ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 line line NOUN NN Number=Sing _ _ _ _ 34 MM6 Mm6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 5502 # text = Quantitative reverse transcriptase-polymerase chain reaction (RT-PCR) showed an increase in steady-state TNF-alpha mRNA after 3 to 4 hours of cross-linking. 1 Quantitative Quantitative ADJ JJ Degree=Pos _ _ _ _ 2 reverse reverse NOUN NN Number=Sing _ _ _ _ 3 transcriptase transcriptase NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 6 chain chain NOUN NN Number=Sing _ _ _ _ 7 reaction reaction NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 RT-PCR RT-PCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 increase increase NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 steady steady ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 state state NOUN NN Number=Sing _ _ _ _ 18 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 alpha alpha NOUN NN Number=Sing _ _ _ _ 21 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 22 after after ADP IN _ _ _ _ _ 23 3 3 NUM CD NumType=Card _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 4 4 NUM CD NumType=Card _ _ _ _ 26 hours hour NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 -linking -linking NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5503 # text = CD15 cross-linking also concomitantly increased interleukin-1 beta (IL-1 beta) mRNA, while no apparent change was observed in the levels of beta-actin mRNA, indicating specificity. 1 CD15 CD15 NOUN NN Number=Sing _ _ _ _ 2 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 concomitantly concomitantly ADV RB _ _ _ _ _ 6 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 beta beta NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 while while SCONJ IN _ _ _ _ _ 20 no no DET DT _ _ _ _ _ 21 apparent apparent ADJ JJ Degree=Pos _ _ _ _ 22 change change NOUN NN Number=Sing _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 levels level NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 actin actin NOUN NN Number=Sing _ _ _ _ 32 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 35 specificity specificity NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 5504 # text = To examine transcriptional regulation of cytokine genes by CD15 engagement, a CAT plasmid reporter construct containing IL-1 beta promoter/enhancer sequences was introduced into MM6. 1 To to PART TO _ _ _ _ _ 2 examine examine VERB VB VerbForm=Inf _ _ _ _ 3 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 7 genes gene NOUN NNS Number=Plur _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 15 15 NUM CD NumType=Card _ _ _ _ 11 engagement engagement NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 CAT cat NOUN NN Number=Sing _ _ _ _ 15 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 16 reporter reporter NOUN NN Number=Sing _ _ _ _ 17 construct construct NOUN NN Number=Sing _ _ _ _ 18 containing contain VERB VBG VerbForm=Ger _ _ _ _ 19 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 beta beta NOUN NN Number=Sing _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 / / PUNCT , _ _ _ _ SpaceAfter=No 25 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 26 sequences sequence NOUN NNS Number=Plur _ _ _ _ 27 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 28 introduced introduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 into into ADP IN _ _ _ _ _ 30 MM6 Mm6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 5505 # text = Subsequent cross-linking of CD15 increased CAT activity. 1 Subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 2 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 -linking -linking NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 CD15 CD15 PROPN NNP Number=Sing _ _ _ _ 6 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 CAT cat ADJ JJ Degree=Pos _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 5506 # text = CD15 engagement by monoclonal antibody also attenuated IL-1 beta transcript degradation, demonstrating that signaling via CD15 also had posttranscriptional effects. 1 CD15 CD15 NUM CD NumType=Card _ _ _ _ 2 engagement engagement NOUN NN Number=Sing _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 5 antibody antibody NOUN NN Number=Sing _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 attenuated attenuate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 beta beta NOUN NN Number=Sing _ _ _ _ 12 transcript transcript NOUN NN Number=Sing _ _ _ _ 13 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 demonstrating demonstrat VERB VBG VerbForm=Ger _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 18 via via ADP IN _ _ _ _ _ 19 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 15 15 NUM CD NumType=Card _ _ _ _ 21 also also ADV RB _ _ _ _ _ 22 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 posttranscriptional posttranscriptional ADJ JJ Degree=Pos _ _ _ _ 24 effects effect NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5507 # text = Nuclear extracts of anti-CD15 cross-linked cells demonstrated enhanced levels of the transcriptional factor activator protein-1, minimally changed nuclear factor-kappa B, and did not affect SV40 promoter specific protein-1. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 extracts extract NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 anti-CD15 anti-CD15 NUM CD NumType=Card _ _ _ _ 5 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 -linked -link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 levels level NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 activator activator NOUN NN Number=Sing _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 minimally minimally ADV RB _ _ _ _ _ 21 changed change VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 not not PART RB _ _ _ _ _ 31 affect affect VERB VB VerbForm=Inf _ _ _ _ 32 SV40 SV40 NUM CD NumType=Card _ _ _ _ 33 promoter promoter NOUN NN Number=Sing _ _ _ _ 34 specific specific ADJ JJ Degree=Pos _ _ _ _ 35 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 5508 # text = We conclude that engagement of CD15 on monocytes results in monocyte activation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 engagement engagement NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 CD15 CD15 NOUN NN Number=Sing _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 9 results result NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 monocyte monocyte ADJ JJ Degree=Pos _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 5509 # text = In addition to its well-recognized adhesive role, CD15 may function as an important signaling molecule capable of initiating proinflammatory events in monocytes that come into contact with activated endothelium. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 5 well well ADV RB Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 recognized recognize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 adhesive adhesive ADJ JJ Degree=Pos _ _ _ _ 9 role role NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 15 15 NUM CD NumType=Card _ _ _ _ 13 may may AUX MD VerbForm=Fin _ _ _ _ 14 function function VERB VB VerbForm=Inf _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 important important ADJ JJ Degree=Pos _ _ _ _ 18 signaling signaling NOUN NN Number=Sing _ _ _ _ 19 molecule molecule NOUN NN Number=Sing _ _ _ _ 20 capable capable ADJ JJ Degree=Pos _ _ _ _ 21 of of SCONJ IN _ _ _ _ _ 22 initiating initiat VERB VBG VerbForm=Ger _ _ _ _ 23 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 24 events event NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 27 that that PRON WDT PronType=Rel _ _ _ _ 28 come come VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 into into ADP IN _ _ _ _ _ 30 contact contact NOUN NN Number=Sing _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 endothelium endothelium NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5510 # text = Document 003001372 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001372 003001372 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5511 # text = Vitamin 1 Vitamin Vitamin PROPN NNP Number=Sing _ _ _ _ # sent_id = 5512 # text = E therapy of acute CCl4-induced hepatic injury in mice is associated with inhibition of nuclear factor kappa B binding. 1 E e NOUN NN Number=Sing _ _ _ _ 2 therapy therapy NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 acute acute NOUN NN Number=Sing _ _ _ _ 5 CCl4 CCl4 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT : _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 hepatic hepatic ADJ JJ Degree=Pos _ _ _ _ 9 injury injury NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 mice mouse NOUN NNS Number=Plur _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5513 # text = Oxidative stress, with reactive oxygen intermediate formation, may represent a common mechanism by which liver injury is induced by diverse etiologies. 1 Oxidative Oxidative ADJ JJ Degree=Pos _ _ _ _ 2 stress stress NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 6 oxygen oxygen ADJ JJ Degree=Pos _ _ _ _ 7 intermediate intermediate ADJ JJ Degree=Pos _ _ _ _ 8 formation formation NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 may may AUX MD VerbForm=Fin _ _ _ _ 11 represent represent VERB VB VerbForm=Inf _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 common common ADJ JJ Degree=Pos _ _ _ _ 14 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 which which DET WDT PronType=Int _ _ _ _ 17 liver liver NOUN NN Number=Sing _ _ _ _ 18 injury injury NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 diverse diverse ADJ JJ Degree=Pos _ _ _ _ 23 etiologies etiology NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5514 # text = Oxidative stress enhances nuclear factor kappa B (NF-kappa B) activity, and NF-kappa B activity has been shown to enhance the expression of cytotoxic cytokines. 1 Oxidative Oxidative ADJ JJ Degree=Pos _ _ _ _ 2 stress stress NOUN NN Number=Sing _ _ _ _ 3 enhances enhance NOUN NNS Number=Plur _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 24 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 cytotoxic cytotoxic ADJ JJ Degree=Pos _ _ _ _ 31 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 5515 # text = Acute hepatic injury caused by reactive oxygen intermediate production was induced by an intraperitoneal injection of CCl4 in mice. 1 Acute Acute ADV RB _ _ _ _ _ 2 hepatic hepatic ADJ JJ Degree=Pos _ _ _ _ 3 injury injury NOUN NN Number=Sing _ _ _ _ 4 caused cause VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 7 oxygen oxygen ADJ JJ Degree=Pos _ _ _ _ 8 intermediate intermediate ADJ JJ Degree=Pos _ _ _ _ 9 production production NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 intraperitoneal intraperitoneal ADJ JJ Degree=Pos _ _ _ _ 15 injection injection NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 CCl4 Ccl4 NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 5516 # text = This injury was significantly inhibited by intravenous pretreatment of the mice with a water-soluble emulsion of alpha-tocopherol. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 injury injury NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 significantly significantly ADV RB _ _ _ _ _ 5 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 intravenous intravenous ADJ JJ Degree=Pos _ _ _ _ 8 pretreatment pretreatment NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 mice mouse NOUN NNS Number=Plur _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 water water NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 17 emulsion emulsion NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 tocopherol tocopherol NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5517 # text = Alpha-tocopherol treatment of the mice given the CCl4 also reduced the NF-kappa B binding to levels approaching those found in normal mice. 1 Alpha Alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 tocopherol tocopherol NOUN NN Number=Sing _ _ _ _ 4 treatment treatment NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 mice mouse NOUN NNS Number=Plur _ _ _ _ 8 given give VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 CCl4 CCl4 PROPN NNP Number=Sing _ _ _ _ 11 also also ADV RB _ _ _ _ _ 12 reduced reduce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 levels level NOUN NNS Number=Plur _ _ _ _ 21 approaching approach VERB VBG VerbForm=Ger _ _ _ _ 22 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 23 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 normal normal ADJ JJ Degree=Pos _ _ _ _ 26 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5518 # text = In vitro treatment of a monocyte/macrophage cell line with CCl4 led to enhanced NF-kappa B binding and an increase in tumor necrosis factor-alpha (TNF-alpha) messenger RNA levels. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 3 treatment treatment NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 line line NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 CCl4 CCl4 PROPN NNP Number=Sing _ _ _ _ 13 led lead VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B b PROPN NNP Number=Sing _ _ _ _ 20 binding binding VERB VBG VerbForm=Ger _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 increase increase NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 tumor tumor NOUN NN Number=Sing _ _ _ _ 26 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 alpha alpha NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 messenger messenger NOUN NN Number=Sing _ _ _ _ 36 RNA RNA ADP IN _ _ _ _ _ 37 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 5519 # text = Liver specimens taken from patients with acute fulminant hepatitis had markedly increased NF-kappa B binding activity in comparison with the binding of normal livers. 1 Liver liver PROPN NNP Number=Sing _ _ _ _ 2 specimens specimen NOUN NNS Number=Plur _ _ _ _ 3 taken take VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 patients patient NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 acute acute ADJ JJ Degree=Pos _ _ _ _ 8 fulminant fulminant ADJ JJ Degree=Pos _ _ _ _ 9 hepatitis hepatitis NOUN NN Number=Sing _ _ _ _ 10 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 markedly markedly ADV RB _ _ _ _ _ 12 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B b PROPN NNP Number=Sing _ _ _ _ 17 binding binde VERB VBG VerbForm=Ger _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 comparison comparison NOUN NN Number=Sing _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 binding binding NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 normal normal ADJ JJ Degree=Pos _ _ _ _ 26 livers liver NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5520 # text = These data demonstrate that abolishing acute hepatic injury with alpha-tocopherol, a free radical scavenger, also eliminated increased NF-kappa B binding. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 abolishing abolish VERB VBG VerbForm=Ger _ _ _ _ 6 acute acute ADV RB _ _ _ _ _ 7 hepatic hepatic ADJ JJ Degree=Pos _ _ _ _ 8 injury injury NOUN NN Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 tocopherol tocopherol NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 free free ADJ JJ Degree=Pos _ _ _ _ 16 radical radical ADJ JJ Degree=Pos _ _ _ _ 17 scavenger scavenger NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 also also ADV RB _ _ _ _ _ 20 eliminated eliminate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ _ 26 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5521 # text = It is tempting to speculate that enhanced NF-kappa B expression caused by free radical production/oxidative stress may modulate liver injury, perhaps through an effect on cytotoxic cytokine synthesis. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 tempting tempt VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 speculate speculate VERB VB VerbForm=Inf _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B b PROPN NNP Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 caused cause VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 free free ADJ JJ Degree=Pos _ _ _ _ 16 radical radical ADJ JJ Degree=Pos _ _ _ _ 17 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 / / PUNCT , _ _ _ _ SpaceAfter=No 19 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 20 stress stress NOUN NN Number=Sing _ _ _ _ 21 may may AUX MD VerbForm=Fin _ _ _ _ 22 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 23 liver liver NOUN NN Number=Sing _ _ _ _ 24 injury injury NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 perhaps perhaps ADV RB _ _ _ _ _ 27 through through ADP IN _ _ _ _ _ 28 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 effect effect NOUN NN Number=Sing _ _ _ _ 30 on on ADP IN _ _ _ _ _ 31 cytotoxic cytotoxic ADJ JJ Degree=Pos _ _ _ _ 32 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 33 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5522 # text = Document 003001380 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001380 003001380 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5523 # text = Fludarabine-induced immunosuppression is associated with inhibition of STAT1 signaling. 1 Fludarabine Fludarabine VERB VB Mood=Imp|VerbForm=Fin _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 immunosuppression immunosuppression NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 STAT1 STAT1 NUM CD NumType=Card _ _ _ _ 11 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5524 # text = Fludarabine is a nucleoside analog used in the treatment of hematologic malignancies that can induce severe and prolonged immunosuppression. 1 Fludarabine Fludarabine PRON PRP _ _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 nucleoside nucleoside ADJ JJ Degree=Pos _ _ _ _ 5 analog analog NOUN NN Number=Sing _ _ _ _ 6 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 treatment treatment NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 hematologic hematologic ADJ JJ Degree=Pos _ _ _ _ 12 malignancies malignancy NOUN NNS Number=Plur _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 can can AUX MD VerbForm=Fin _ _ _ _ 15 induce induce VERB VB VerbForm=Inf _ _ _ _ 16 severe severe ADJ JJ Degree=Pos _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 prolonged prolonge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 immunosuppression immunosuppression NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 5525 # text = Although it can be incorporated into the DNA of dividing cells, fludarabine is also a potent inhibitor of cells with a low growth fraction, thus it must have other mechanisms of action. 1 Although although SCONJ IN _ _ _ _ _ 2 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 3 can can AUX MD VerbForm=Fin _ _ _ _ 4 be be AUX VB VerbForm=Inf _ _ _ _ 5 incorporated incorporate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 into into ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 DNA dna NOUN NN Number=Sing _ _ _ _ 9 of of SCONJ IN _ _ _ _ _ 10 dividing dividing VERB VBG VerbForm=Ger _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 fludarabine fludarabine NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 also also ADV RB _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 potent potent NOUN NN Number=Sing _ _ _ _ 18 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 low low ADJ JJ Degree=Pos _ _ _ _ 24 growth growth NOUN NN Number=Sing _ _ _ _ 25 fraction fraction NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 thus thus ADV RB _ _ _ _ _ 28 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 29 must must AUX MD VerbForm=Fin _ _ _ _ 30 have have VERB VB VerbForm=Inf _ _ _ _ 31 other other ADJ JJ Degree=Pos _ _ _ _ 32 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 action action NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 5526 # text = STAT1, which is activated in response to many lymphocyte-activating cytokines including the interferons, is essential for cell-mediated immunity, as the absence of this protein is associated with prominent defects in the ability to control viral infections. 1 STAT1 stat1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 which which PRON WDT PronType=Rel _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 response response NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 many many ADJ JJ Degree=Pos _ _ _ _ 10 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 activating activate VERB VBG VerbForm=Ger _ _ _ _ 13 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 14 including include VERB VBG VerbForm=Ger _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 interferons interferon NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 essential essential ADJ JJ Degree=Pos _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 cell cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 immunity immunity NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 as as SCONJ IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 absence absence NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 31 protein protein NOUN NN Number=Sing _ _ _ _ 32 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 prominent prominent ADJ JJ Degree=Pos _ _ _ _ 36 defects defects NOUN NNS Number=Plur _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 ability ability NOUN NN Number=Sing _ _ _ _ 40 to to PART TO _ _ _ _ _ 41 control control VERB VB VerbForm=Inf _ _ _ _ 42 viral viral ADJ JJ Degree=Pos _ _ _ _ 43 infections infection NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 5527 # text = Here we show that fludarabine, but not the immunosuppressant cyclosporine A, inhibits the cytokine-induced activation of STAT1 and STAT1-dependent gene transcription in normal resting or activated lymphocytes. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 fludarabine fludarabine NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 but but CCONJ CC _ _ _ _ _ 8 not not ADV RB _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 immunosuppressant immunosuppressant ADJ JJ Degree=Pos _ _ _ _ 11 cyclosporine cyclosporine NOUN NN Number=Sing _ _ _ _ 12 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 STAT1 stat1 PROPN NNP Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 STAT1 stat1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 26 gene gene NOUN NN Number=Sing _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 normal normal ADJ JJ Degree=Pos _ _ _ _ 30 resting resting NOUN NN Number=Sing _ _ _ _ 31 or or CCONJ CC _ _ _ _ _ 32 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 5528 # text = Fludarabine caused a specific depletion of STAT1 protein (and mRNA) but not of other STATs. 1 Fludarabine Fludarabine PROPN NNP Number=Sing _ _ _ _ 2 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 depletion depletion NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 STAT1 STAT1 NUM CD NumType=Card _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 and and CCONJ CC _ _ _ _ _ 11 mRNA mRNA NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 not not ADV RB _ _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 other other ADJ JJ Degree=Pos _ _ _ _ 17 STATs STAT NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 5529 # text = This loss of STAT1 was also seen in cells from patients treated with fludarabine in vivo. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 loss loss NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 STAT1 STAT1 PROPN NNP Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 patients patient NOUN NNS Number=Plur _ _ _ _ 12 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 fludarabine fludarabine NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 5530 # text = Brief exposure to fludarabine led to a sustained loss of STAT1, analogous to the prolonged period of immunosuppression induced by exposure to the drug in vivo. 1 Brief brief ADJ JJ Degree=Pos _ _ _ _ 2 exposure exposure NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 fludarabine fludarabine VERB VB VerbForm=Inf _ _ _ _ 5 led lead VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 sustained sustain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 loss loss NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 STAT1 stat1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 analogous analogous CCONJ CC _ _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 prolonged prolonge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 period period NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 immunosuppression immunosuppression NOUN NN Number=Sing _ _ _ _ 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 exposure exposure NOUN NN Number=Sing _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 drug drug NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5531 # text = Thus, STAT1 may be a useful target in the development of new immunosuppressive and antineoplastic agents. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 STAT1 STAT1 PROPN NNP Number=Sing _ _ _ _ 4 may may AUX MD VerbForm=Fin _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 useful useful ADJ JJ Degree=Pos _ _ _ _ 8 target target NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 development development NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 new new ADJ JJ Degree=Pos _ _ _ _ 14 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 antineoplastic antineoplastic ADJ JJ Degree=Pos _ _ _ _ 17 agents agent NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5532 # text = Document 003001385 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001385 003001385 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5533 # text = Nuclear factor-kappa B activity in T cells from patients with rheumatic diseases: a preliminary report. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 patients patient NOUN NN Number=Sing _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 rheumatic rheumatic ADJ JJ Degree=Pos _ _ _ _ 14 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 : : PUNCT : _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 preliminary preliminary ADJ JJ Degree=Pos _ _ _ _ 18 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5534 # text = OBJECTIVE: 1 OBJECTIVE objective NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 5535 # text = The NF-kappa B/Rel family of transcription factors regulates the expression of many genes involved in the immune or inflammatory response at the transcriptional level. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa PROPN NNP Number=Sing _ _ _ _ 5 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 / / PUNCT , _ _ _ _ SpaceAfter=No 7 Rel Rel PROPN NNP Number=Sing _ _ _ _ 8 family family NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ _ 12 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 many many ADJ JJ Degree=Pos _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 immune immune ADJ JJ Degree=Pos _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 24 response response NOUN NN Number=Sing _ _ _ _ 25 at at ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 28 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5536 # text = The aim of this study was to determine whether distinctive patterns of NF-kappa B activation are seen in different forms of joint disease. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 aim aim NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 study study NOUN NN Number=Sing _ _ _ _ 6 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 determine determine VERB VB VerbForm=Inf _ _ _ _ 9 whether whether SCONJ IN _ _ _ _ _ 10 distinctive distinctive ADJ JJ Degree=Pos _ _ _ _ 11 patterns pattern NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 different different ADJ JJ Degree=Pos _ _ _ _ 22 forms form NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 joint joint ADJ JJ Degree=Pos _ _ _ _ 25 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5537 # text = METHODS: The DNA binding activity of these nucleoproteins was examined in purified synovial and peripheral T cells from patients with various chronic rheumatic diseases (12: four with rheumatoid arthritis; five with spondyloarthropathies; and three with osteoarthritis). 1 METHODS method NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 The the DET DT Definite=Def|PronType=Art _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ _ 5 binding binding VERB VBG VerbForm=Ger _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 9 nucleoproteins nucleoprotein NOUN NNS Number=Plur _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 synovial synovial ADJ JJ Degree=Pos _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 patients patient NOUN NNS Number=Plur _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 various various ADJ JJ Degree=Pos _ _ _ _ 23 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 24 rheumatic rheumatic ADJ JJ Degree=Pos _ _ _ _ 25 diseases diseasis NOUN NNS Number=Plur _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 : : PUNCT : _ _ _ _ _ 29 four four NUM CD NumType=Card _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 rheumatoid rheumatoid ADJ JJ Degree=Pos _ _ _ _ 32 arthritis arthritis NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 ; ; PUNCT , _ _ _ _ _ 34 five five NUM CD NumType=Card _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 spondyloarthropathies spondyloarthropathy NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 ; ; PUNCT , _ _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 three three NUM CD NumType=Card _ _ _ _ 40 with with ADP IN _ _ _ _ _ 41 osteoarthritis osteoarthritis NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 5538 # text = RESULTS: Electrophoretic mobility shift assays disclosed two specific complexes bound to a NF-kappa B specific 32P-labelled oligonucleotide in nucleoproteins extracted from purified T cells isolated from synovial fluid and peripheral blood of patients with rheumatoid arthritis. 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 4 mobility mobility NOUN NN Number=Sing _ _ _ _ 5 shift shift NOUN NN Number=Sing _ _ _ _ 6 assays assays ADV RB _ _ _ _ _ 7 disclosed disclose VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 two two NUM CD NumType=Card _ _ _ _ 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 complexes complexe NOUN NNS Number=Plur _ _ _ _ 11 bound bound ADJ JJ Degree=Pos _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa PROPN NNP Number=Sing _ _ _ _ 17 B b PROPN NNP Number=Sing _ _ _ _ 18 specific specific ADJ JJ Degree=Pos _ _ _ _ 19 32P- 32p- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 labelled label VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 oligonucleotide oligonucleotide ADV RB _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 nucleoproteins nucleoprotein NOUN NNS Number=Plur _ _ _ _ 24 extracted extract VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 from from ADP IN _ _ _ _ _ 26 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 T t PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 from from ADP IN _ _ _ _ _ 31 synovial synovial ADJ JJ Degree=Pos _ _ _ _ 32 fluid fluid NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 35 blood blood NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 patients patient NOUN NNS Number=Plur _ _ _ _ 38 with with ADP IN _ _ _ _ _ 39 rheumatoid rheumatoid ADJ JJ Degree=Pos _ _ _ _ 40 arthritis arthritis NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 5539 # text = The complexes consisted of p50/p50 homodimers and p50/p65 heterodimers. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 complexes complexe NOUN NNS Number=Plur _ _ _ _ 3 consisted consist VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 / / SYM SYM _ _ _ _ SpaceAfter=No 7 p50 p50 NUM CD NumType=Card _ _ _ _ 8 homodimers homodimer NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 p65 p65 NUM CD NumType=Card _ _ _ _ 13 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 5540 # text = Increased NF-kappa B binding to DNA in synovial T cells was observed relative to peripheral T cells. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa PROPN NNP Number=Sing _ _ _ _ 5 B b PROPN NNP Number=Sing _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 DNA dna NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 synovial synovial ADJ JJ Degree=Pos _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 relative relative ADV RB _ _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 5541 # text = In non-rheumatoid arthritis, binding of NF-kappa B in synovial T cells was exclusively mediated by p50/p50 homodimers. 1 In in ADP IN _ _ _ _ _ 2 non-rheumatoid non-rheumatoid ADJ JJ Degree=Pos _ _ _ _ 3 arthritis arthritis NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 binding binding VERB VBG VerbForm=Ger _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 synovial synovial ADJ JJ Degree=Pos _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 exclusively exclusively ADV RB _ _ _ _ _ 17 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 / / SYM SYM _ _ _ _ SpaceAfter=No 21 p50 p50 NUM CD NumType=Card _ _ _ _ 22 homodimers homodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 5542 # text = CONCLUSION: 1 CONCLUSION conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 5543 # text = Overall, the results suggest that NF-kappa B may play a central part in the activation of infiltrating T cells in chronic rheumatoid arthritis. 1 Overall overall ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 may may AUX MD VerbForm=Fin _ _ _ _ 12 play play VERB VB VerbForm=Inf _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 central central ADJ JJ Degree=Pos _ _ _ _ 15 part part NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 of of SCONJ IN _ _ _ _ _ 20 infiltrating infiltrat VERB VBG VerbForm=Ger _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 25 rheumatoid rheumatoid ADJ JJ Degree=Pos _ _ _ _ 26 arthritis arthritis NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5544 # text = The activation of this nuclear factor is qualitatively different in rheumatoid synovial T cells to that in other forms of non-rheumatoid arthritis (for example, osteoarthritis, spondyloarthropathies). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 qualitatively qualitatively ADV RB _ _ _ _ _ 9 different different ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 rheumatoid rheumatoid ADJ JJ Degree=Pos _ _ _ _ 12 synovial synovial ADJ JJ Degree=Pos _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 other other ADJ JJ Degree=Pos _ _ _ _ 19 forms form NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 non-rheumatoid non-rheumatoid ADJ JJ Degree=Pos _ _ _ _ 22 arthritis arthritis NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 for for ADP IN _ _ _ _ _ 25 example example NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 osteoarthritis osteoarthritis NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 spondyloarthropathies spondyloarthropathy NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5545 # text = Document 003001386 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001386 003001386 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5546 # text = Interleukin 4 activates a signal transducer and activator of transcription (Stat) protein which interacts with an interferon-gamma activation site-like sequence upstream of the I epsilon exon in a human B cell line. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ _ 2 4 4 NUM CD NumType=Card _ _ _ _ 3 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 signal signal NOUN NN Number=Sing _ _ _ _ 6 transducer transducer NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 activator activator NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 Stat Stat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 interacts interact VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 gamma gamma NOUN NN Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ _ 23 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 like like ADJ JJ Degree=Pos _ _ _ _ 26 sequence sequence NOUN NN Number=Sing _ _ _ _ 27 upstream upstream NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 31 epsilon epsilon X FW Foreign=Yes _ _ _ _ 32 exon exon X FW Foreign=Yes _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 human human ADJ JJ Degree=Pos _ _ _ _ 36 B b NOUN NN Number=Sing _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 5547 # text = Evidence for the involvement of Janus kinase 3 and interleukin-4 Stat. 1 Evidence evidence NOUN NN Number=Sing _ _ _ _ 2 for for ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 involvement involvement NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 Janus Janus PROPN NNP Number=Sing _ _ _ _ 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 3 3 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 4 4 NUM CD NumType=Card _ _ _ _ 13 Stat Stat NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5548 # text = Germ line C transcripts can be induced by IL-4 in the human B cell line, BL-2. 1 Germ Germ ADJ JJ Degree=Pos _ _ _ _ 2 line line NOUN NN Number=Sing _ _ _ _ 3 C c NOUN NN Number=Sing _ _ _ _ 4 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 5 can can AUX MD VerbForm=Fin _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 4 4 NUM CD NumType=Card _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 BL BL NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5549 # text = Utilizing a IFN-gamma activation site-like DNA sequence element located upstream of the I epsilon exon, we demonstrated by gel mobility shift assays that IL-4 induced a binding activity in the cytosol and nucleus of BL-2 cells. 1 Utilizing Utilize VERB VBG VerbForm=Ger _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 gamma gamma NOUN NN Number=Sing _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 like like ADJ JJ Degree=Pos _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ _ 11 sequence sequence NOUN NN Number=Sing _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ _ 13 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 upstream upstream NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 I I PROPN NNP Number=Sing _ _ _ _ 18 epsilon epsilon ADP IN _ _ _ _ _ 19 exon exon PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 22 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 gel gel NOUN NN Number=Sing _ _ _ _ 25 mobility mobility NOUN NN Number=Sing _ _ _ _ 26 shift shift NOUN NN Number=Sing _ _ _ _ 27 assays assay NOUN NNS Number=Plur _ _ _ _ 28 that that PRON WDT PronType=Rel _ _ _ _ 29 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - SYM SYM _ _ _ _ SpaceAfter=No 31 4 4 NUM CD NumType=Card _ _ _ _ 32 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 binding bind VERB VBG VerbForm=Ger _ _ _ _ 35 activity activity NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 BL BL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 2 2 NUM CD NumType=Card _ _ _ _ 45 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 5550 # text = This factor was designated IL-4 NAF (IL-4-induced nuclear-activating factors) and was identified as a tyrosine phosphoprotein, which translocates from the cytosol to the nucleus upon IL-4 treatment. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 designated designate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 4 4 NUM CD NumType=Card _ _ _ _ 8 NAF Naf NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 activating activating NOUN NN Number=Sing _ _ _ _ 18 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 as as ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 26 phosphoprotein phosphoprotein NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 which which PRON WDT PronType=Rel _ _ _ _ 29 translocates translocate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 from from ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 36 upon upon ADP IN _ _ _ _ _ 37 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 4 4 NUM CD NumType=Card _ _ _ _ 40 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 5551 # text = Because these are the characteristics of a signal transducer and activator of transcription (Stat) protein, we determined whether antibodies to Stat proteins will interfere with gel mobility shift and found that antibodies to IL-4 Stat, also known as Stat6, but not antibodies to other Stat proteins, interfere with the formation of the IL-4 NAF complex. 1 Because because SCONJ IN _ _ _ _ _ 2 these these PRON DT Number=Plur|PronType=Dem _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 characteristics characteristic NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 signal signal NOUN NN Number=Sing _ _ _ _ 9 transducer transducer NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 activator activator NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 Stat Stat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 20 determined determine VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 whether whether SCONJ IN _ _ _ _ _ 22 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 Stat Stat PROPN NNP Number=Sing _ _ _ _ 25 proteins protein NOUN NNS Number=Plur _ _ _ _ 26 will will AUX MD VerbForm=Fin _ _ _ _ 27 interfere interfere VERB VB VerbForm=Inf _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 gel gel NOUN NN Number=Sing _ _ _ _ 30 mobility mobility NOUN NN Number=Sing _ _ _ _ 31 shift shift NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 that that SCONJ IN _ _ _ _ _ 35 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 4 4 NUM CD NumType=Card _ _ _ _ 40 Stat Stat NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 also also ADV RB _ _ _ _ _ 43 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 as as ADP IN _ _ _ _ _ 45 Stat6 stat6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 but but CCONJ CC _ _ _ _ _ 48 not not ADV RB _ _ _ _ _ 49 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 50 to to ADP IN _ _ _ _ _ 51 other other ADJ JJ Degree=Pos _ _ _ _ 52 Stat Stat PROPN NNP Number=Sing _ _ _ _ 53 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 54 , , PUNCT , _ _ _ _ _ 55 interfere interfere ADV RB PronType=Dem _ _ _ _ 56 with with ADP IN _ _ _ _ _ 57 the the DET DT Definite=Def|PronType=Art _ _ _ _ 58 formation formation NOUN NN Number=Sing _ _ _ _ 59 of of ADP IN _ _ _ _ _ 60 the the DET DT Definite=Def|PronType=Art _ _ _ _ 61 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 62 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 63 4 4 NUM CD NumType=Card _ _ _ _ 64 NAF Naf PROPN NNP Number=Sing _ _ _ _ 65 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 66 . . PUNCT . _ _ _ _ _ # sent_id = 5552 # text = Congruous with the involvement of a Stat protein, IL-4 induced robust Janus kinase 3 (JAK3) activity in BL-2 cells. 1 Congruous Congruous ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 involvement involvement NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 Stat Stat PROPN NNP Number=Sing _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - SYM SYM _ _ _ _ SpaceAfter=No 12 4 4 NUM CD NumType=Card _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 robust robust ADJ JJ Degree=Pos _ _ _ _ 15 Janus Janus PROPN NNP Number=Sing _ _ _ _ 16 kinase kinase NOUN NN Number=Sing _ _ _ _ 17 3 3 NUM CD NumType=Card _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 JAK3 JAK3 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 BL BL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5553 # text = Cotransfection of JAK3 with IL-4 1 Cotransfection Cotransfection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 JAK3 JAK3 NOUN NN Number=Sing _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 4 4 NUM CD NumType=Card _ _ _ _ # sent_id = 5554 # text = Stat into COS-7 cells produced an intracellular activity which bound the same IFN-gamma activation site-like sequence and comigrated with IL-4 NAF in electrophoretic mobility shift assay. 1 Stat Stat PROPN NNP Number=Sing _ _ _ _ 2 into into ADP IN _ _ _ _ _ 3 COS COS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 7 7 NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 bound bound VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 same same ADJ JJ Degree=Pos _ _ _ _ 15 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 gamma gamma NOUN NN Number=Sing _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 like like ADJ JJ Degree=Pos _ _ _ _ 22 sequence sequence NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 comigrated comigrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 4 4 NUM CD NumType=Card _ _ _ _ 29 NAF Naf NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 32 mobility mobility NOUN NN Number=Sing _ _ _ _ 33 shift shift NOUN NN Number=Sing _ _ _ _ 34 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 5555 # text = These results show that IL-4 NAF is IL-4 Stat, which is activated by JAK3 in response to IL-4 receptor engagement. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 4 4 NUM CD NumType=Card _ _ _ _ 8 NAF Naf NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 4 4 NUM CD NumType=Card _ _ _ _ 13 Stat Stat NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 JAK3 JAK3 NUM CD NumType=Card _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 response response NOUN NN Number=Sing _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 4 4 NUM CD NumType=Card _ _ _ _ 26 receptor receptor NOUN NN Number=Sing _ _ _ _ 27 engagement engagement NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5556 # text = Document 003001387 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001387 003001387 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5557 # text = Limited proteolysis for assaying ligand binding affinities of nuclear receptors. 1 Limited limited ADJ JJ Degree=Pos _ _ _ _ 2 proteolysis proteolysis NOUN NN Number=Sing _ _ _ _ 3 for for SCONJ IN _ _ _ _ _ 4 assaying assay VERB VBG VerbForm=Ger _ _ _ _ 5 ligand ligand NOUN NN Number=Sing _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 affinities affinity NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5558 # text = The binding of natural or synthetic ligands to nuclear receptors is the triggering event leading to gene transcription activation or repression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 binding binding NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 natural natural ADJ JJ Degree=Pos _ _ _ _ 5 or or CCONJ CC _ _ _ _ _ 6 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 7 ligands ligand NOUN NNS Number=Plur _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 receptors receptor NOUN NNS Number=Plur _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 triggering triggering NOUN NN Number=Sing _ _ _ _ 14 event event NOUN NN Number=Sing _ _ _ _ 15 leading lead VERB VBG VerbForm=Ger _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 gene gene VERB VB VerbForm=Inf _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 repression repression NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5559 # text = Ligand binding to the ligand binding domain of these receptors induces conformational changes that are evidenced by an increased resistance of this domain to proteases. 1 Ligand Ligand PROPN NNP Number=Sing _ _ _ _ 2 binding bind VERB VBG VerbForm=Ger _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 ligand ligand NOUN NN Number=Sing _ _ _ _ 6 binding binde VERB VBG VerbForm=Ger _ _ _ _ 7 domain domain NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 10 receptors receptor NOUN NNS Number=Plur _ _ _ _ 11 induces induces NOUN NNS Number=Plur _ _ _ _ 12 conformational conformational ADJ JJ Degree=Pos _ _ _ _ 13 changes change NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 evidenced evidence VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 resistance resistance NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 23 domain domain NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 proteases protease NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5560 # text = In vitro labeled receptors were incubated with various synthetic or natural agonists or antagonists and submitted to trypsin digestion. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro NOUN NN Number=Sing _ _ _ _ 3 labeled label VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 receptors receptor NOUN NNS Number=Plur _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 incubated incubate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 various various ADJ JJ Degree=Pos _ _ _ _ 9 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 natural natural ADJ JJ Degree=Pos _ _ _ _ 12 agonists agonist NOUN NNS Number=Plur _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 antagonists antagonist NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 submitted submit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 trypsin trypsin VERB VB VerbForm=Inf _ _ _ _ 19 digestion digestion NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 5561 # text = Proteolysis products were separated by SDS-PAGE and quantified. 1 Proteolysis Proteolysis PROPN NNP Number=Sing _ _ _ _ 2 products product NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 separated separate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 SDS SDS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 PAGE page PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 quantified quantify ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 5562 # text = The amount of trypsin-resistant fragments was proportional to receptor occupancy by the ligand, and allowed the determination of dissociation constants (kDa). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 amount amount NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 trypsin- trypsin- SYM NFP _ _ _ _ SpaceAfter=No 5 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 6 fragments fragment NOUN NNS Number=Plur _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 proportional proportional ADJ JJ Degree=Pos _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 receptor receptor VERB VB VerbForm=Inf _ _ _ _ 11 occupancy occupancy NOUN NN Number=Sing _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 allowed allow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 determination determination NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 dissociation dissociation NOUN NN Number=Sing _ _ _ _ 22 constants constant NOUN NNS Number=Plur _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 kDa kDa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5563 # text = Using the wild-type or mutated human retinoic acid receptor alpha as a model, kDa values determined by classical competition binding assays using tritiated ligands are in agreement with those measured by the proteolytic assay. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 type type NOUN NN Number=Sing _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 10 acid acid ADJ JJ Degree=Pos _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 alpha alpha NOUN NN Number=Sing _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 model model NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 kDa kDa PROPN NNP Number=Sing _ _ _ _ 18 values value NOUN NNS Number=Plur _ _ _ _ 19 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 classical classical ADJ JJ Degree=Pos _ _ _ _ 22 competition competition NOUN NN Number=Sing _ _ _ _ 23 binding bind VERB VBG VerbForm=Ger _ _ _ _ 24 assays assay NOUN NNS Number=Plur _ _ _ _ 25 using use VERB VBG VerbForm=Ger _ _ _ _ 26 tritiated tritiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 ligands ligand NOUN NNS Number=Plur _ _ _ _ 28 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 agreement agreement NOUN NN Number=Sing _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 33 measured measure VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 proteolytic proteolytic ADJ JJ Degree=Pos _ _ _ _ 37 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 5564 # text = This method was successfully extended to human retinoic X receptor alpha, glucocorticoid receptor, and progesterone receptor, thus providing a basis for a new, faster assay to determine simultaneously the affinity and conformation of receptors when bound to a given ligand. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 method method NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 successfully successfully ADV RB _ _ _ _ _ 5 extended extend VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 retinoic retinoic NOUN NN Number=Sing _ _ _ _ 9 X x SYM SYM _ _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 progesterone progesterone VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 thus thus ADV RB _ _ _ _ _ 21 providing provide VERB VBG VerbForm=Ger _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 basis basis NOUN NN Number=Sing _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 new new ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 faster faster ADJ JJR Degree=Cmp _ _ _ _ 29 assay assay NOUN NN Number=Sing _ _ _ _ 30 to to PART TO _ _ _ _ _ 31 determine determine VERB VB VerbForm=Inf _ _ _ _ 32 simultaneously simultaneously ADV RB _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 affinity affinity NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 conformation conformation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 receptors receptor NOUN NNS Number=Plur _ _ _ _ 39 when when ADV WRB PronType=Int _ _ _ _ 40 bound bound ADJ JJ Degree=Pos _ _ _ _ 41 to to ADP IN _ _ _ _ _ 42 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 given give VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5565 # text = Document 003001393 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001393 003001393 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5566 # text = Isolation of a candidate repressor/activator, NF-E1 (YY-1, delta), that binds to the immunoglobulin kappa 1 Isolation Isolation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 candidate candidate NOUN NN Number=Sing _ _ _ _ 5 repressor repressor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 / / PUNCT , _ _ _ _ SpaceAfter=No 7 activator activator NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 E1 E1 PROPN NNP Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 YY YY INTJ UH _ _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 delta delta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 21 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 25 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 5567 # text = 3' enhancer and the immunoglobulin heavy-chain mu E1 site. 1 3 3 X LS _ _ _ _ SpaceAfter=No 2 ' ' PUNCT `` _ _ _ _ _ 3 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 7 heavy heavy ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 chain chain NOUN NN Number=Sing _ _ _ _ 10 mu mu NOUN NN Number=Sing _ _ _ _ 11 E1 E1 NUM CD NumType=Card _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5568 # text = We have determined that the developmental control of immunoglobulin kappa 3' enhancer (kappa E3') activity is the result of the combined influence of positive- and negative-acting elements. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 7 control control NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ' ' PUNCT `` _ _ _ _ _ 13 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 E3 E3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 result result NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 influence influence NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 positive positive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 negative negative ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 acting acting VERB VBG VerbForm=Ger _ _ _ _ 34 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 5569 # text = We show that a central core in the kappa E3' enhancer is active at the pre-B-cell stage but is repressed by flanking negative-acting elements. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 central central ADJ JJ Degree=Pos _ _ _ _ 6 core core NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 E3 E3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ' ' PUNCT '' _ _ _ _ _ 12 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 active active ADJ JJ Degree=Pos _ _ _ _ 15 at at ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 pre pre X AFX _ _ _ _ SpaceAfter=No 18 -B -b NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 stage stage NOUN NN Number=Sing _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 repressed repress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 by by SCONJ IN _ _ _ _ _ 26 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 27 negative negative ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 acting acting VERB VBG VerbForm=Ger _ _ _ _ 30 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 5570 # text = The negative-acting sequences repress enhancer activity in a position- and orientation-independent manner at the pre-B-cell stage. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 negative negative ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 acting act VERB VBG VerbForm=Ger _ _ _ _ 5 sequences sequence NOUN NNS Number=Plur _ _ _ _ 6 repress repress NOUN NN Number=Sing _ _ _ _ 7 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 position position NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 orientation orientation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 independent independent ADJ JJ Degree=Pos _ _ _ _ 17 manner manner NOUN NN Number=Sing _ _ _ _ 18 at at ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 pre pre X AFX _ _ _ _ SpaceAfter=No 21 -B -b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 stage stage NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5571 # text = We have isolated a human cDNA clone encoding a zinc finger protein (NF-E1) that binds to the negative-acting segment of the kappa E3' enhancer. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 7 clone clone NOUN NN Number=Sing _ _ _ _ 8 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 zinc zinc NOUN NN Number=Sing _ _ _ _ 11 finger finger NOUN NN Number=Sing _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 E1 E1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 negative negative ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 acting act VERB VBG VerbForm=Ger _ _ _ _ 25 segment segment NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 E3 E3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ' ' PUNCT '' _ _ _ _ _ 31 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 5572 # text = This protein also binds to the immunoglobulin heavy-chain enhancer mu E1 site. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 8 heavy heavy ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 chain chain NOUN NN Number=Sing _ _ _ _ 11 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 12 mu mu NOUN NN Number=Sing _ _ _ _ 13 E1 E1 NUM CD NumType=Card _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 5573 # text = NF-E1 is encoded by the same gene as the YY-1 protein, which binds to the adeno-associated virus P5 promoter. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 E1 E1 PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 encoded encod VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 same same ADJ JJ Degree=Pos _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 YY YY NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 adeno adeno NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 virus virus NOUN NN Number=Sing _ _ _ _ 25 P5 p5 NUM CD NumType=Card _ _ _ _ 26 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5574 # text = NF-E1 is also the human homologue of the mouse delta protein, which binds to ribosomal protein gene promoters. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 E1 E1 PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 homologue homologue NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 mouse mouse NOUN NN Number=Sing _ _ _ _ 12 delta delta NOUN NN Number=Sing _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 ribosomal ribosomal VERB VB VerbForm=Inf _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5575 # text = The predicted amino acid sequence of this protein contains features characteristic of transcriptional activators as well as transcriptional repressors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 predicted predict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 amino amino DET DT _ _ _ _ _ 4 acid acid ADJ JJ Degree=Pos _ _ _ _ 5 sequence sequence NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 features feature NOUN NNS Number=Plur _ _ _ _ 11 characteristic characteristic NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 14 activators activator NOUN NNS Number=Plur _ _ _ _ 15 as as ADV RB _ _ _ _ _ 16 well well ADV RB Degree=Pos _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 19 repressors repressor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 5576 # text = Cotransfection studies with this cDNA indicate that it can repress basal promoter activity. 1 Cotransfection Cotransfection NOUN NN Number=Sing _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 6 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 9 can can AUX MD VerbForm=Fin _ _ _ _ 10 repress repress VERB VB VerbForm=Inf _ _ _ _ 11 basal basal ADJ JJ Degree=Pos _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 5577 # text = The apparent dual function of this protein is discussed. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 apparent apparent ADJ JJ Degree=Pos _ _ _ _ 3 dual dual ADJ JJ Degree=Pos _ _ _ _ 4 function function NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 discussed discuss VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5578 # text = Document 003001403 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001403 003001403 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5579 # text = Cyclosporin 1 Cyclosporin Cyclosporin PROPN NNP Number=Sing _ _ _ _ # sent_id = 5580 # text = A interferes with the inducible degradation of NF-kappa B inhibitors, but not with the processing of p105/NF-kappa B1 in T cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 interferes interfere NOUN NNS Number=Plur _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 6 degradation degradation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 not not ADV RB _ _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 processing processing NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 p105 p105 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ 25 B1 b1 PROPN NNP Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 T t PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5581 # text = The transcription factor NF-kappa B controls the induction of numerous cytokine promoters during the activation of T lymphocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B B PROPN NNP Number=Sing _ _ _ _ 8 controls control VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 numerous numerous ADJ JJ Degree=Pos _ _ _ _ 13 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 14 promoters promoter NOUN NNS Number=Plur _ _ _ _ 15 during during ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5582 # text = Inhibition of T cell activation by the immunosuppressants cyclosporin A (CsA) and FK506 exerts a suppressive effect on the induction of these NF-kappa B-controlled cytokine promoters. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 immunosuppressants immunosuppressant NOUN NNS Number=Plur _ _ _ _ 9 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 10 A A PROPN NNP Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 FK506 FK506 NUM CD NumType=Card _ _ _ _ 16 exerts exert NOUN NNS Number=Plur _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 suppressive suppressive ADJ JJ Degree=Pos _ _ _ _ 19 effect effect NOUN NN Number=Sing _ _ _ _ 20 on on ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 induction induction NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 25 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 controlled controll VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 32 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 5583 # text = We show for human Jurkat T leukemia cells, as well as human and mouse primary T lymphocytes, that this inhibitory effect is accompanied by an impaired nuclear translocation of the Rel proteins c-Rel, RelA/p65 and NF-kappa B1/p50, whereas the nuclear appearance of RelB remains unaffected. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 as as ADV RB _ _ _ _ _ 11 well well ADV RB Degree=Pos _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 mouse mouse VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 primary primary ADJ JJ Degree=Pos _ _ _ _ 17 T t NOUN NN Number=Sing _ _ _ _ 18 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 22 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 23 effect effect NOUN NN Number=Sing _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 impaired impaire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 30 translocation translocation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 Rel Rel PROPN NNP Number=Sing _ _ _ _ 34 proteins protein VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 c class NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 RelA RelA NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 / / PUNCT , _ _ _ _ SpaceAfter=No 41 p65 p65 NOUN NN Number=Sing _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 kappa kappa NOUN NN Number=Sing _ _ _ _ 46 B1/ b1/ PUNCT HYPH _ _ _ _ SpaceAfter=No 47 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 whereas whereas SCONJ IN _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 52 appearance appearance NOUN NN Number=Sing _ _ _ _ 53 of of ADP IN _ _ _ _ _ 54 RelB RelB PROPN NNP Number=Sing _ _ _ _ 55 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 56 unaffected unaffected ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 5584 # text = CsA does not interfere with the synthesis of Rel proteins, but prevents the inducible degradation of cytosolic NF-kappa B inhibitors I kappa B alpha and I kappa B beta upon T cell activation. 1 CsA csa NOUN NN Number=Sing _ _ _ _ 2 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 not not PART RB _ _ _ _ _ 4 interfere interfere VERB VB VerbForm=Inf _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 Rel Rel NOUN NN Number=Sing _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 prevents prevent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 16 degradation degradation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa PROPN NNP Number=Sing _ _ _ _ 22 B b PROPN NNP Number=Sing _ _ _ _ 23 inhibitors inhibitor VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 25 kappa kappa PROPN NNP Number=Sing _ _ _ _ 26 B b PROPN NNP Number=Sing _ _ _ _ 27 alpha alpha PROPN NNP Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 30 kappa kappa PROPN NNP Number=Sing _ _ _ _ 31 B b PROPN NNP Number=Sing _ _ _ _ 32 beta beta PROPN NNP Number=Sing _ _ _ _ 33 upon upon ADP IN _ _ _ _ _ 34 T t PROPN NNP Number=Sing _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ _ 36 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 5585 # text = CsA neither inhibits the processing of the NF-kappa B1 precursor p105 to p50, nor does it "stabilize" the C-terminal portion of p105, I kappa 1 CsA csa ADP IN _ _ _ _ _ 2 neither neither DET DT _ _ _ _ _ 3 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 processing processing NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B1 B1 PROPN NNP Number=Sing _ _ _ _ 12 precursor precursor NOUN NN Number=Sing _ _ _ _ 13 p105 p105 NUM CD NumType=Card _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 nor nor CCONJ CC _ _ _ _ _ 18 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 20 " " PUNCT `` _ _ _ _ SpaceAfter=No 21 stabilize stabilize VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 22 " " PUNCT '' _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 C- C- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 26 portion portion NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 p105 p105 NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 31 kappa kappa PROPN NNP Number=Sing _ _ _ _ # sent_id = 5586 # text = B gamma, which is degraded during p105 processing to mature p50. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 degraded degrad VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 during during ADP IN _ _ _ _ _ 8 p105 p105 NUM CD NumType=Card _ _ _ _ 9 processing process NOUN NN Number=Sing _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 mature mature ADJ JJ Degree=Pos _ _ _ _ 12 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 5587 # text = These results indicate that CsA interferes with a specific event in the signal-induced degradation of I kappa B alpha and I kappa B beta, but does not affect the processing of NF-kappa B1/p105 to p50. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 CsA csa PROPN NNP Number=Sing _ _ _ _ 6 interferes interfere VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 event event NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 degradation degradation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 19 kappa kappa PROPN NNP Number=Sing _ _ _ _ 20 B B PROPN NNP Number=Sing _ _ _ _ 21 alpha alpha PROPN NNP Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ 25 B b PROPN NNP Number=Sing _ _ _ _ 26 beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 but but CCONJ CC _ _ _ _ _ 29 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 not not PART RB _ _ _ _ _ 31 affect affect VERB VB VerbForm=Inf _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 processing processing NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 kappa kappa PROPN NNP Number=Sing _ _ _ _ 38 B1/p105 b1/p105 PROPN NNP Number=Sing _ _ _ _ 39 to to ADP IN _ _ _ _ _ 40 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5588 # text = Document 003001406 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001406 003001406 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5589 # text = Suppression of TNFalpha-mediated NFkappaB activity by myricetin and other flavonoids through downregulating the activity of IKK in ECV304 cells. 1 Suppression Suppression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 NFkappaB Nfkappab PROPN NNP Number=Sing _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 myricetin myricetin NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 other other ADJ JJ Degree=Pos _ _ _ _ 12 flavonoids flavonoid NOUN NNS Number=Plur _ _ _ _ 13 through through SCONJ IN _ _ _ _ _ 14 downregulating downregulat VERB VBG VerbForm=Ger _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 IKK IKK PROPN NNP Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 ECV ECV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 304 304 NUM CD NumType=Card _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5590 # text = Flavonoids are a group of naturally-occurring phenolic compounds in the plant kingdom, and many flavonoids are found with vascular protective properties. 1 Flavonoids Flavonoid NOUN NNS Number=Plur _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 group group NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 naturally naturally ADV RB _ _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 occurring occurre VERB VBG VerbForm=Ger _ _ _ _ 9 phenolic phenolic ADJ JJ Degree=Pos _ _ _ _ 10 compounds compound NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 plant plant NOUN NN Number=Sing _ _ _ _ 14 kingdom kingdom NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 many many ADJ JJ Degree=Pos _ _ _ _ 18 flavonoids flavonoid NOUN NNS Number=Plur _ _ _ _ 19 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 23 protective protective ADJ JJ Degree=Pos _ _ _ _ 24 properties property NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5591 # text = Nevertheless how the protective response is exerted by flavonoids is not well characterized. 1 Nevertheless nevertheless SCONJ IN _ _ _ _ _ 2 how how ADV WRB PronType=Int _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 protective protective ADJ JJ Degree=Pos _ _ _ _ 5 response response NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 exerted exert VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 flavonoids flavonoid NOUN NNS Number=Plur _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 well well ADV RB Degree=Pos _ _ _ _ 13 characterized characterize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 5592 # text = In view of the nuclear factor-kappaB (NFkappaB) may play a central role in the initiation of atherosclerosis, prevention of the activation of NFkappaB represents an important role in protecting vascular injury. 1 In in ADP IN _ _ _ _ _ 2 view view NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 may may AUX MD VerbForm=Fin _ _ _ _ 13 play play VERB VB VerbForm=Inf _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 central central ADJ JJ Degree=Pos _ _ _ _ 16 role role NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 initiation initiation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 atherosclerosis atherosclerosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 prevention prevention NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 29 represents represent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 important important ADJ JJ Degree=Pos _ _ _ _ 32 role role NOUN NN Number=Sing _ _ _ _ 33 in in SCONJ IN _ _ _ _ _ 34 protecting protect VERB VBG VerbForm=Ger _ _ _ _ 35 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 36 injury injury NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 5593 # text = In this study, the effects of flavonoids on NFkappaB/inhibitor-kappaB (IkappaB) system in ECV304 cells activated with tumor necrosis factor-alpha (TNFalpha) were examined. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 effects effect NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 flavonoids flavonoid NOUN NNS Number=Plur _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT : _ _ _ _ SpaceAfter=No 14 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 system system NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 ECV304 ECV304 PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 tumor tumor NOUN NN Number=Sing _ _ _ _ 25 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 alpha alpha NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 33 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 5594 # text = We investigated the inhibitory action of six flavonoids on IkappaB kinase (IKK) activity, an enzyme recently found to phosphorylate critical serine residues of IkappaB for degradation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 5 action action NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 six six NUM CD NumType=Card _ _ _ _ 8 flavonoids flavonoid NOUN NNS Number=Plur _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 IkappaB Ikappab NOUN NN Number=Sing _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 IKK IKK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 enzyme enzyme NOUN NN Number=Sing _ _ _ _ 19 recently recently ADV RB _ _ _ _ _ 20 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 phosphorylate phosphorylate VERB VB VerbForm=Inf _ _ _ _ 23 critical critical ADJ JJ Degree=Pos _ _ _ _ 24 serine serine NOUN NN Number=Sing _ _ _ _ 25 residues residue NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5595 # text = Of six flavonoids tested, myricetin was found to strongly inhibit IKK kinase activity, and prevent the degradation of IkappaBalpha and IkappaBbeta in activated endothelial cells. 1 Of of ADP IN _ _ _ _ _ 2 six six NUM CD NumType=Card _ _ _ _ 3 flavonoids flavonoid NOUN NNS Number=Plur _ _ _ _ 4 tested tested VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 myricetin myricetin NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 strongly strongly ADV RB _ _ _ _ _ 11 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 12 IKK IKK NUM CD NumType=Card _ _ _ _ 13 kinase kinase NOUN NN Number=Sing _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 prevent prevent VERB VB VerbForm=Inf _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 degradation degradation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 IkappaBbeta IkappaBbeta PROPN NNP Number=Sing _ _ _ _ 24 in in ADV RB _ _ _ _ _ 25 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5596 # text = Furthermore, myricetin was also found to inhibit NFkappaB activity correlated with suppression of monocyte adhesion to ECV304 cells. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 myricetin myricetin NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 9 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 suppression suppression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 16 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 ECV ECV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 304 304 NUM CD NumType=Card _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5597 # text = Therefore we conclude that flavonoids may be of therapeutic value for vascular disease through down regulation of NFkappaB/IkappaB system. 1 Therefore therefore ADV RB _ _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 flavonoids flavonoid NOUN NNS Number=Plur _ _ _ _ 6 may may AUX MD VerbForm=Fin _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 10 value value NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 13 disease disease NOUN NN Number=Sing _ _ _ _ 14 through through ADP IN _ _ _ _ _ 15 down down ADJ JJ Degree=Pos _ _ _ _ 16 regulation regulation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 / / PUNCT , _ _ _ _ SpaceAfter=No 20 IkappaB Ikappab PROPN NNP Number=Sing _ _ _ _ 21 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5598 # text = Copyright 1999 Wiley-Liss, Inc. 1 Copyright copyright NOUN NN Number=Sing _ _ _ _ 2 1999 1999 NUM CD NumType=Card _ _ _ _ 3 Wiley Wiley PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 Liss Liss PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 Inc. Inc. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5599 # text = Document 003001407 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001407 003001407 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5600 # text = Structural and functional characterization of the human CD36 gene promoter: identification of a proximal PEBP2/CBF site. 1 Structural Structural ADJ JJ Degree=Pos _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 functional functional ADJ JJ Degree=Pos _ _ _ _ 4 characterization characterization NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 CD36 Cd36 NOUN NN Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 : : PUNCT : _ _ _ _ _ 12 identification identification NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 16 PEBP2/ Pebp2/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 CBF CBF NOUN NN Number=Sing _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5601 # text = CD36 is a cell surface glycoprotein composed of a single polypeptide chain, which interacts with thrombospondin, collagens type I and IV, oxidized low density lipoprotein, fatty acids, anionic phospholipids, and erythrocytes parasitized with Plasmodium falciparum. 1 CD36 Cd36 PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 surface surface NOUN NN Number=Sing _ _ _ _ 6 glycoprotein glycoprotein NOUN NN Number=Sing _ _ _ _ 7 composed compose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 single single ADJ JJ Degree=Pos _ _ _ _ 11 polypeptide polypeptide NOUN NN Number=Sing _ _ _ _ 12 chain chain NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 interacts interact VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 thrombospondin thrombospondin NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 collagens collagen VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 type type NOUN NN Number=Sing _ _ _ _ 21 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 IV iv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 oxidized oxidize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 low low ADJ JJ Degree=Pos _ _ _ _ 27 density density NOUN NN Number=Sing _ _ _ _ 28 lipoprotein lipoprotein NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 fatty fatty NOUN NN Number=Sing _ _ _ _ 31 acids acid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 anionic anionic ADJ JJ Degree=Pos _ _ _ _ 34 phospholipids phospholipid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 erythrocytes erythrocyte NOUN NNS Number=Plur _ _ _ _ 38 parasitized parasitize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 with with ADP IN _ _ _ _ _ 40 Plasmodium Plasmodium NOUN NN Number=Sing _ _ _ _ 41 falciparum falciparum NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 5602 # text = Its expression is restricted to a few cell types, including monocyte/macrophages. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 2 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 restricted restrict VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 few few ADJ JJ Degree=Pos _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 including include VERB VBG VerbForm=Ger _ _ _ _ 13 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 5603 # text = In these cells, CD36 is involved in phagocytosis of apoptotic cells, and foam cell formation by uptake of oxidized low density lipoprotein. 1 In in ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 CD36 Cd36 PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 involved involved ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 phagocytosis phagocytosis NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 foam foam NOUN NN Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 formation formation NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 uptake uptake NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 oxidized oxidized ADJ JJ Degree=Pos _ _ _ _ 22 low low ADJ JJ Degree=Pos _ _ _ _ 23 density density NOUN NN Number=Sing _ _ _ _ 24 lipoprotein lipoprotein NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5604 # text = To study the molecular mechanisms that control the transcription of the CD36 gene in monocytic cells we have isolated and analyzed the CD36 promoter. 1 To to PART TO _ _ _ _ _ 2 study study VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 5 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 control control VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 CD36 Cd36 PROPN NNP Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 18 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 36 36 NUM CD NumType=Card _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5605 # text = Transient expression experiments of 5'-deletion fragments of the CD36 promoter coupled to luciferase demonstrated that as few as 158 base pairs upstream from the transcription initiation site were sufficient to direct the monocyte-specific transcription of the reporter gene. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 deletion deletion NOUN NN Number=Sing _ _ _ _ 9 fragments fragment NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 36 36 NUM CD NumType=Card _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 coupled couple VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 18 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 few few ADJ JJ Degree=Pos _ _ _ _ 22 as as ADP IN _ _ _ _ _ 23 158 158 NUM CD NumType=Card _ _ _ _ 24 base base NOUN NN Number=Sing _ _ _ _ 25 pairs pair NOUN NNS Number=Plur _ _ _ _ 26 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 initiation initiation NOUN NN Number=Sing _ _ _ _ 31 site site NOUN NN Number=Sing _ _ _ _ 32 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 33 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 34 to to PART TO _ _ _ _ _ 35 direct direct VERB VB VerbForm=Inf _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 39 transcription transcription NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 reporter reporter NOUN NN Number=Sing _ _ _ _ 43 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 5606 # text = Within the above region, the fragment spanning nucleotides -158 to -90 was required for optimal transcription in monocytic cells. 1 Within within ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 above above ADJ JJ Degree=Pos _ _ _ _ 4 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 fragment fragment NOUN NN Number=Sing _ _ _ _ 8 spanning spann VERB VBG VerbForm=Ger _ _ _ _ 9 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 158 158 NUM CD NumType=Card _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 - - SYM SYM _ _ _ _ SpaceAfter=No 14 90 90 NUM CD NumType=Card _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 5607 # text = Biochemical analysis of the region -158/-90 revealed a binding site for transcription factors of the polyomavirus enhancer-binding protein 2/core-binding factor (PEBP2/CBF) family at position -103. 1 Biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 region region NOUN NN Number=Sing _ _ _ _ 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 158/-90 158/-90 NUM CD NumType=Card _ _ _ _ 8 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 binding bind VERB VBG VerbForm=Ger _ _ _ _ 11 site site NOUN NN Number=Sing _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factors factor NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 polyomavirus polyomavirus NOUN NN Number=Sing _ _ _ _ 18 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 binding binding VERB VBG VerbForm=Ger _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ _ 22 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 / / PUNCT , _ _ _ _ SpaceAfter=No 24 core-binding core-binding VERB VBG VerbForm=Ger _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 PEBP2/ PEBP2ith NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 CBF CBF NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 family family NOUN NN Number=Sing _ _ _ _ 31 at at ADP IN _ _ _ _ _ 32 position position NOUN NN Number=Sing _ _ _ _ 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 103 103 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 5608 # text = Disruption of the PEBP2/CBF site markedly diminished the role of the PEBP2/CBF factors in the constitutive transcription of the CD36 gene. 1 Disruption disruption NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 PEBP2/ Pebp2/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 CBF CBF NOUN NN Number=Sing _ _ _ _ 6 site site NOUN NN Number=Sing _ _ _ _ 7 markedly markedly ADV RB _ _ _ _ _ 8 diminished diminish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 role role NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 PEBP2/ Pebp2/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 CBF Cbf NOUN NN Number=Sing _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 36 36 NUM CD NumType=Card _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5609 # text = The involvement of members of the PEBP2/CBF family in chromosome translocations associated with acute myeloid leukemia, and in the transcriptional regulation of the myeloid-specific genes encoding for myeloperoxidase, elastase, and the colony-stimulating factor receptor, highlights the relevance of the regulation of the CD36 gene promoter in monocytic cells by members of the PEBP2/CBF family. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 involvement involvement NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 members member NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 PEBP2/ Pebp2/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 CBF CBF NOUN NN Number=Sing _ _ _ _ 9 family family NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 chromosome chromosome ADJ JJ Degree=Pos _ _ _ _ 12 translocations translocation NOUN NNS Number=Plur _ _ _ _ 13 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 acute acute NOUN NN Number=Sing _ _ _ _ 16 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 17 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 23 regulation regulation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 myeloid myeloid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 specific specific ADJ JJ Degree=Pos _ _ _ _ 29 genes gene NOUN NNS Number=Plur _ _ _ _ 30 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 myeloperoxidase myeloperoxidase NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 elastase elastase NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 stimulating stimulate VERB VBG VerbForm=Ger _ _ _ _ 41 factor factor NOUN NN Number=Sing _ _ _ _ 42 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 highlights highlight VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 relevance relevance NOUN NN Number=Sing _ _ _ _ 47 of of ADP IN _ _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 regulation regulation NOUN NN Number=Sing _ _ _ _ 50 of of ADP IN _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 CD36 Cd36 PROPN NNP Number=Sing _ _ _ _ 53 gene gene NOUN NN Number=Sing _ _ _ _ 54 promoter promoter NOUN NN Number=Sing _ _ _ _ 55 in in ADP IN _ _ _ _ _ 56 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 57 cells cell NOUN NNS Number=Plur _ _ _ _ 58 by by ADP IN _ _ _ _ _ 59 members member NOUN NNS Number=Plur _ _ _ _ 60 of of ADP IN _ _ _ _ _ 61 the the DET DT Definite=Def|PronType=Art _ _ _ _ 62 PEBP2/ Pebp2/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 63 CBF CBF NOUN NN Number=Sing _ _ _ _ 64 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 65 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5610 # text = Document 003001412 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001412 003001412 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5611 # text = Transcription factor activation and functional stimulation of human monocytes. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 functional functional ADJ JJ Degree=Pos _ _ _ _ 6 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5612 # text = Activation of expression of genes encoding transcription factors: 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 genes gene NOUN NNS Number=Plur _ _ _ _ 6 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 : : PUNCT : _ _ _ _ _ # sent_id = 5613 # text = c-fos and c-jun and formation of AP1 transcriptional complex in human monocytes was investigated. 1 c- c- SYM NFP _ _ _ _ SpaceAfter=No 2 fos fo NOUN NNS Number=Plur _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 c- c- SYM NFP _ _ _ _ SpaceAfter=No 5 jun jun NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 formation formation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 AP1 AP1 NUM CD NumType=Card _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 complex complex NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 investigated investigated VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 5614 # text = It was found that lipopolysaccharide induced strongly both c-fos and c-jun expression as well as AP1 formation. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 lipopolysaccharide lipopolysaccharide ADV RB _ _ _ _ _ 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 strongly strongly ADV RB _ _ _ _ _ 8 both both CCONJ CC _ _ _ _ _ 9 c- c- SYM NFP _ _ _ _ SpaceAfter=No 10 fos fo NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 c- c- SYM NFP _ _ _ _ SpaceAfter=No 13 jun jun NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 as as ADV RB _ _ _ _ _ 16 well well ADV RB Degree=Pos _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 AP1 AP1 NUM CD NumType=Card _ _ _ _ 19 formation formation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 5615 # text = Interferon gamma activated strongly c-fos and weakly c-jun and AP1. 1 Interferon Interferon PROPN NNP Number=Sing _ _ _ _ 2 gamma gamma PROPN NNP Number=Sing _ _ _ _ 3 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 strongly strongly ADV RB _ _ _ _ _ 5 c- c- SYM NFP _ _ _ _ SpaceAfter=No 6 fos fo NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 weakly weakly ADV RB _ _ _ _ _ 9 c- c- SYM NFP _ _ _ _ SpaceAfter=No 10 jun jun NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 AP1 Ap1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 5616 # text = Tumor necrosis factor induced slightly c-fos and had almost no effect on c-jun and AP1. 1 Tumor tumor ADP IN _ _ _ _ _ 2 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 slightly slightly ADV RB _ _ _ _ _ 6 c- c- SYM NFP _ _ _ _ SpaceAfter=No 7 fos fo NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 almost almost ADV RB _ _ _ _ _ 11 no no DET DT _ _ _ _ _ 12 effect effect NOUN NN Number=Sing _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 c- c- SYM NFP _ _ _ _ SpaceAfter=No 15 jun jun NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 AP1 Ap1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 5617 # text = The data suggest that differences in functional responses elicited in monocytes by all three factors may be dependent on different routes on nuclear signalling employed by the factors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 differences difference NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 functional functional ADJ JJ Degree=Pos _ _ _ _ 8 responses respons NOUN NNS Number=Plur _ _ _ _ 9 elicited elicit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 all all DET DT _ _ _ _ _ 14 three three NUM CD NumType=Card _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ _ 16 may may AUX MD VerbForm=Fin _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 different different ADJ JJ Degree=Pos _ _ _ _ 21 routes route NOUN NNS Number=Plur _ _ _ _ 22 on on ADP IN _ _ _ _ _ 23 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 24 signalling signalling NOUN NN Number=Sing _ _ _ _ 25 employed employ VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5618 # text = Document 003001416 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001416 003001416 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5619 # text = Interferon-gamma modulates the lipopolysaccharide-induced expression of AP-1 and NF-kappa B at the mRNA and protein level in human monocytes. 1 Interferon Interferon PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 gamma gamma PROPN NNP Number=Sing _ _ _ _ 4 modulates modulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 at at ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ _ 24 level level NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5620 # text = Interferon-gamma (IFN-gamma) modulates the expression of several cytokines by human monocytes at the transcriptional level. 1 Interferon Interferon PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 gamma gamma NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 modulates modulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 several several ADJ JJ Degree=Pos _ _ _ _ 14 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 18 at at ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 21 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5621 # text = In view of these findings, we analyzed the effects of IFN-gamma on the expression of different transcription factors in activated human monocytes. 1 In in ADP IN _ _ _ _ _ 2 view view NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 findings finding NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 8 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 effects effect NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 IFN IFN ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 gamma gamma NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 different different ADJ JJ Degree=Pos _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factors factor NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5622 # text = Priming of human monocytes with IFN-gamma resulted in the down regulation of c-fos and c-jun mRNA in response to stimulation with lipopolysaccharide (LPS) compared to the effects of LPS alone. 1 Priming Priming NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 gamma gamma PROPN NNP Number=Sing _ _ _ _ 9 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 down down ADJ JJ Degree=Pos _ _ _ _ 13 regulation regulation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 fos fo NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 c- c- SYM NFP _ _ _ _ SpaceAfter=No 20 jun jun NOUN NN Number=Sing _ _ _ _ 21 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 compared compare VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 effects effect NOUN NNS Number=Plur _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 LPS Lp PROPN NNP Number=Sing _ _ _ _ 37 alone alone ADV RB _ _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 5623 # text = Not only was this effect observed at the mRNA level, but activator protein-1 (AP-1) DNA binding capacity was affected as well, A strong reduction was observed in the LPS-induced DNA-binding activity of AP-1 in the presence of IFN-gamma. 1 Not not ADV RB _ _ _ _ _ 2 only only ADV RB _ _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 at at ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 10 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 activator activator NOUN NN Number=Sing _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 DNA dna NOUN NN Number=Sing _ _ _ _ 23 binding binding VERB VBG VerbForm=Ger _ _ _ _ 24 capacity capacity NOUN NN Number=Sing _ _ _ _ 25 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 26 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 as as ADV RB _ _ _ _ _ 28 well well ADV RB Degree=Pos _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 strong strong ADJ JJ Degree=Pos _ _ _ _ 32 reduction reduction NOUN NN Number=Sing _ _ _ _ 33 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 34 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 LPS Lp NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 - - PUNCT , _ _ _ _ SpaceAfter=No 39 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 binding binding VERB VBG VerbForm=Ger _ _ _ _ 43 activity activity NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 presence presence NOUN NN Number=Sing _ _ _ _ 51 of of ADP IN _ _ _ _ _ 52 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 54 gamma gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 5624 # text = LPS-stimulated monocytes showed an increased expression of p105 mRNA, the precursor of the p50 subunit of the transcription factor nuclear factor-kappa B (NF-kappa B), while no effect was noticed on the expression of p65 mRNA. 1 LPS Lp INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 p105 p105 NOUN NN Number=Sing _ _ _ _ 11 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 precursor precursor NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 p50 p50 NOUN NN Number=Sing _ _ _ _ 18 subunit subunit NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa NOUN NN Number=Sing _ _ _ _ 27 B b PROPN NNP Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappa kappa PROPN NNP Number=Sing _ _ _ _ 32 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 while while SCONJ IN _ _ _ _ _ 36 no no DET DT _ _ _ _ _ 37 effect effect NOUN NN Number=Sing _ _ _ _ 38 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 39 noticed notice VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 40 on on ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 expression expression NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 p65 p65 NUM CD NumType=Card _ _ _ _ 45 mRNA mRNA NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 5625 # text = In contrast, IFN-gamma priming did not affect the expression of p105 transcripts but enhanced the expression of p65 mRNA (two-fold). 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 gamma gamma NOUN NN Number=Sing _ _ _ _ 7 priming priming NOUN NN Number=Sing _ _ _ _ 8 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 affect affect VERB VB VerbForm=Inf _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 p105 p105 NUM CD NumType=Card _ _ _ _ 15 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 p65 p65 NUM CD NumType=Card _ _ _ _ 22 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5626 # text = Priming with IFN-gamma followed by LPS stimulation resulted in a further increase in the expression of p65 mRNA. 1 Priming Prime VERB VBG VerbForm=Ger _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 gamma gamma NOUN NN Number=Sing _ _ _ _ 6 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 LPS LPS PROPN NNP Number=Sing _ _ _ _ 9 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 10 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 further further ADJ JJ Degree=Pos _ _ _ _ 14 increase increase NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 p65 p65 NUM CD NumType=Card _ _ _ _ 20 mRNA mRNA NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5627 # text = This was due to an increase in the half-life of p65 mRNA (75 vs 150 minutes). 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 due due ADP IN _ _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 increase increase NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 half half NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 life life NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 p65 p65 NUM CD NumType=Card _ _ _ _ 14 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 75 75 NUM CD NumType=Card _ _ _ _ 17 vs v NOUN NNS Number=Plur _ _ _ _ 18 150 150 NUM CD NumType=Card _ _ _ _ 19 minutes minute NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5628 # text = Electrophoretic mobility shift assays (EMSAs) demonstrated that unstimulated monocytes predominantly expressed p50 NF-kappa B. Stimulation with LPS or IFN-gamma resulted in the expression of p50 and p65 subunits, while the combination of IFN-gamma plus LPS caused a further increase in the expression of NF-kappa B. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assays assay NOUN NNS Number=Plur _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 EMSAs EMSAs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 11 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 12 predominantly predominantly ADV RB _ _ _ _ _ 13 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 p50 p50 NUM CD NumType=Card _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B. B. PROPN NNP Number=Sing _ _ _ _ 19 Stimulation Stimulation PROPN NNP Number=Sing _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 LPS Lps PROPN NNP Number=Sing _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 IFN Ifn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 gamma gamma PROPN NNP Number=Sing _ _ _ _ 26 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 p50 p50 NUM CD NumType=Card _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 p65 p65 NUM CD NumType=Card _ _ _ _ 34 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 while while SCONJ IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 combination combination NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 gamma gamma PROPN NNP Number=Sing _ _ _ _ 43 plus plus CCONJ CC _ _ _ _ _ 44 LPS LPS PROPN NNP Number=Sing _ _ _ _ 45 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 46 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 47 further further ADJ JJ Degree=Pos _ _ _ _ 48 increase increase NOUN NN Number=Sing _ _ _ _ 49 in in ADP IN _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 expression expression NOUN NN Number=Sing _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 kappa kappa PROPN NNP Number=Sing _ _ _ _ 56 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 5629 # text = With Western blotting, it was shown that nuclear extracts from monocytes contained p50 and p65 protein in response to LPS and IFN-gamma stimulation. 1 With with ADP IN _ _ _ _ _ 2 Western western ADJ JJ Degree=Pos _ _ _ _ 3 blotting blotting NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 extracts extract NOUN NNS Number=Plur _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 13 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 p50 p50 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 p65 p65 NUM CD NumType=Card _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 LPS LPS PROPN NNP Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 gamma gamma NOUN NN Number=Sing _ _ _ _ 26 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5630 # text = However, the combined stimulation did not result in enhanced p50 and p65 protein expression. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 6 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 result result VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 p50 p50 NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 p65 p65 NUM CD NumType=Card _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 5631 # text = The effects of IFN-gamma on the transcription factors were specific, since no change was observed in the expression of NF-IL-6 or I kappa B alpha, the inhibitor of NF-kappa B. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 IFN IFN ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 gamma gamma NOUN NN Number=Sing _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 since since SCONJ IN _ _ _ _ _ 15 no no DET DT _ _ _ _ _ 16 change change NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 6 6 NUM CD NumType=Card _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 30 kappa kappa PROPN NNP Number=Sing _ _ _ _ 31 B b PROPN NNP Number=Sing _ _ _ _ 32 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 kappa kappa PROPN NNP Number=Sing _ _ _ _ 40 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 5632 # text = We conclude that the effects of IFN-gamma on the expression of the transcription factors AP-1 and NF-kappa B may be important for the modulatory effects of IFN-gamma on the cytokine expression in activated human monocytes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 IFN IFN ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 gamma gamma NOUN NN Number=Sing _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factors factor NOUN NNS Number=Plur _ _ _ _ 17 AP ap ADV RB _ _ _ _ SpaceAfter=No 18 - - SYM SYM _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa NOUN NN Number=Sing _ _ _ _ 24 B b NOUN NN Number=Sing _ _ _ _ 25 may may AUX MD VerbForm=Fin _ _ _ _ 26 be be AUX VB VerbForm=Inf _ _ _ _ 27 important important ADJ JJ Degree=Pos _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 modulatory modulatory ADJ JJ Degree=Pos _ _ _ _ 31 effects effect NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 IFN IFN ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 gamma gamma NOUN NN Number=Sing _ _ _ _ 36 on on ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 39 expression expression NOUN NN Number=Sing _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 activated activated ADJ JJ Degree=Pos _ _ _ _ 42 human human ADJ JJ Degree=Pos _ _ _ _ 43 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5633 # text = Document 003001420 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001420 003001420 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5634 # text = Potent and stable attenuation of live-HIV-1 by gain of a proteolysis-resistant inhibitor of NF-kappaB (IkappaB-alphaS32/36A) and the implications for vaccine development. 1 Potent potent ADJ JJ Degree=Pos _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 stable stable ADJ JJ Degree=Pos _ _ _ _ 4 attenuation attenuation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 live live ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 gain gain NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 proteolysis proteolysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 resistant resistant NOUN NN Number=Sing _ _ _ _ 18 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 IkappaB- IkappaB- SYM NFP _ _ _ _ SpaceAfter=No 25 alphaS32/ alphas32/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 36A 36A NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 implications implication NOUN NNS Number=Plur _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 vaccine vaccine NOUN NN Number=Sing _ _ _ _ 33 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5635 # text = Live-attenuated human immunodeficiency viruses (HIVs) are candidates for Acquired Immunodeficiency Syndrome (AIDS) vaccine. 1 Live Live PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 attenuated attenuate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 6 viruses viruse NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 HIVs HIV NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 candidates candidate NOUN NNS Number=Plur _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 Acquired acquired PROPN NNP Number=Sing _ _ _ _ 14 Immunodeficiency Immunodeficiency PROPN NNP Number=Sing _ _ _ _ 15 Syndrome Syndrome PROPN NNP Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 AIDS aids NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 vaccine vaccine NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 5636 # text = Based on the simian immunodeficiency virus (SIV) model for AIDS, loss-of-function (e.g. deletion of accessory genes such as nef) has been forwarded as a primary approach for creating enfeebled, but replication-competent, HIV-1/SIV. 1 Based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 on on ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 simian simian ADJ JJ Degree=Pos _ _ _ _ 5 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 SIV SIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 model model NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 AIDS aids NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 loss loss NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 of of ADP IN _ _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 function function NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 e.g. e.g. X FW _ _ _ _ _ 21 deletion deletion NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 accessory accessory ADJ JJ Degree=Pos _ _ _ _ 24 genes gene NOUN NNS Number=Plur _ _ _ _ 25 such such ADJ JJ Degree=Pos _ _ _ _ 26 as as ADP IN _ _ _ _ _ 27 nef nef NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 31 forwarded forward VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 as as ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 primary primary ADJ JJ Degree=Pos _ _ _ _ 35 approach approach NOUN NN Number=Sing _ _ _ _ 36 for for SCONJ IN _ _ _ _ _ 37 creating create VERB VBG VerbForm=Ger _ _ _ _ 38 enfeebled enfeebled ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 but but CCONJ CC _ _ _ _ _ 41 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 competent competent NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 1/ 1ith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 48 SIV Siv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 5637 # text = Regrettably, recent evidence suggests that loss-of-function alone is not always sufficient to prevent the emergence of virulent mutants. 1 Regrettably Regrettably ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 recent recent ADJ JJ Degree=Pos _ _ _ _ 4 evidence evidence NOUN NN Number=Sing _ _ _ _ 5 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 loss lose NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 of of ADP IN _ _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 function function NOUN NN Number=Sing _ _ _ _ 12 alone alone ADV RB _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 always always ADV RB _ _ _ _ _ 16 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 prevent prevent VERB VB VerbForm=Inf _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 emergence emergence NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 virulent virulent ADJ JJ Degree=Pos _ _ _ _ 23 mutants mutant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5638 # text = New strategies that attenuate via mechanisms distinct from loss-of-function are needed for enhancing the safety phenotype of viral genome. 1 New new ADJ JJ Degree=Pos _ _ _ _ 2 strategies strategy NOUN NNS Number=Plur _ _ _ _ 3 that that PRON WDT PronType=Rel _ _ _ _ 4 attenuate attenuate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 via via ADP IN _ _ _ _ _ 6 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 7 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 loss loss NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 of of ADP IN _ _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 function function NOUN NN Number=Sing _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 needed need VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 for for SCONJ IN _ _ _ _ _ 17 enhancing enhance VERB VBG VerbForm=Ger _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 safety safety NOUN NN Number=Sing _ _ _ _ 20 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 viral viral ADJ JJ Degree=Pos _ _ _ _ 23 genome genome NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5639 # text = Here, we propose gain-of-function to be used simultaneously with loss-of-function as a novel approach for attenuating HIV-1. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 gain gain ADV RB _ _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 of of ADP IN _ _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 function function NOUN NN Number=Sing _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 simultaneously simultaneously ADV RB _ _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 loss loss NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 of of ADP IN _ _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 function function NOUN NN Number=Sing _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 novel novel NOUN NN Number=Sing _ _ _ _ 23 approach approach NOUN NN Number=Sing _ _ _ _ 24 for for SCONJ IN _ _ _ _ _ 25 attenuating attenuating VERB VBG VerbForm=Ger _ _ _ _ 26 HIV Hiv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5640 # text = We have constructed an HIV-1 genome carrying the cDNA of a proteolysis-resistant nuclear factor-kappaB inhibitor (IkappaB-alphaS32/36A) in the nef region. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 constructed construct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 genome genome NOUN NN Number=Sing _ _ _ _ 9 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 proteolysis proteolysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 resistant resistant NOUN NN Number=Sing _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappab NOUN NN Number=Sing _ _ _ _ 21 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 IkappaB-alphaS32/ Ikappab-alphas32/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 36A 36a NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 nef nef NOUN NN Number=Sing _ _ _ _ 29 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5641 # text = HIV-1 expressing IkappaB-alphaS32/36A down-regulates viral expression and is highly attenuated in both Jurkat and peripheral blood mononuclear cells. 1 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 expressing expressing NOUN NN Number=Sing _ _ _ _ 5 IkappaB- IkappaB- PUNCT NFP _ _ _ _ SpaceAfter=No 6 alphaS32/36A alphaS32/36a X GW _ _ _ _ _ 7 down down X GW _ _ _ _ SpaceAfter=No 8 -regulates -regulate X GW _ _ _ _ _ 9 viral viral ADJ JJ Degree=Pos _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 highly highly ADV RB _ _ _ _ _ 14 attenuated attenuate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 both both DET DT _ _ _ _ _ 17 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 20 blood blood NOUN NN Number=Sing _ _ _ _ 21 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 5642 # text = We provide formal proof that the phenotypic and attenuating characteristics of IkappaB-alphaS32/36A permit its stable maintenance in a live, replicating HIV-1 despite 180 days of forced ex vivo passaging in tissue culture. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 formal formal ADJ JJ Degree=Pos _ _ _ _ 4 proof proof NOUN NN Number=Sing _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 phenotypic phenotypic NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 attenuating attenuating VERB VBG VerbForm=Ger _ _ _ _ 10 characteristics characteristic NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 IkappaB- Ikappab- SYM NFP _ _ _ _ SpaceAfter=No 13 alphaS32/ alphas32/ SYM SYM _ _ _ _ SpaceAfter=No 14 36 36 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 permit permit NOUN NN Number=Sing _ _ _ _ 17 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 18 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 stable stable ADJ JJ Degree=Pos _ _ _ _ 20 maintenance maintenance NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 live live NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 replicating replicating VERB VBG VerbForm=Ger _ _ _ _ 26 HIV Hiv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 despite despite ADP IN _ _ _ _ _ 30 180 180 NUM CD NumType=Card _ _ _ _ 31 days day NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 forced force VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 ex ex NOUN NN Number=Sing _ _ _ _ 35 vivo vivo NOUN NN Number=Sing _ _ _ _ 36 passaging passaging VERB VBG VerbForm=Ger _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 tissue tissue ADJ JJ Degree=Pos _ _ _ _ 39 culture culture NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 5643 # text = As compared with other open-reading frames embedded into HIV/SIV genome, this degree of stability is unprecedented. 1 As as SCONJ IN _ _ _ _ _ 2 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 other other ADJ JJ Degree=Pos _ _ _ _ 5 open open ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 reading reading NOUN NN Number=Sing _ _ _ _ 8 frames frame NOUN NNS Number=Plur _ _ _ _ 9 embedded embed VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 into into ADP IN _ _ _ _ _ 11 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 SIV SIV PROPN NNP Number=Sing _ _ _ _ 14 genome genome PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 17 degree degree NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 stability stability NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 unprecedented unprecedented ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5644 # text = Thus, IkappaB-alphaS32/36A offers proof-of-principle that artifactually gained functions, when used to attenuate the replication of live HIV-1, can be stable. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 IkappaB- IkappaB- X GW _ _ _ _ SpaceAfter=No 4 alphaS32/36A alphaS32/36a X FW Foreign=Yes _ _ _ _ 5 offers offer X GW _ _ _ _ _ 6 proof proof ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 of of ADP IN _ _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 principle principle NOUN NN Number=Sing _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 artifactually artifactually ADV RB _ _ _ _ _ 13 gained gain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 functions function NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 when when ADV WRB PronType=Int _ _ _ _ 17 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 attenuate attenuate VERB VB VerbForm=Inf _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 replication replication NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 live live ADJ JJ Degree=Pos _ _ _ _ 24 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 can can AUX MD VerbForm=Fin _ _ _ _ 29 be be AUX VB VerbForm=Inf _ _ _ _ 30 stable stable ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 5645 # text = These findings illustrate gain-of-function as a feasible strategy for developing safer live-attenuated HIVs to be tested as candidates for AIDS vaccine. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 illustrate illustrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 gain gain ADV RB _ _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 of of ADP IN _ _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 function function NOUN NN Number=Sing _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 feasible feasible ADJ JJ Degree=Pos _ _ _ _ 12 strategy strategy NOUN NN Number=Sing _ _ _ _ 13 for for SCONJ IN _ _ _ _ _ 14 developing develop VERB VBG VerbForm=Ger _ _ _ _ 15 safer safer ADJ JJR Degree=Cmp _ _ _ _ 16 live live NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 attenuated attenuate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 HIVs HIV NOUN NNS Number=Plur _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 tested test VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 as as SCONJ IN _ _ _ _ _ 24 candidates candidate NOUN NNS Number=Plur _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 AIDS aids NOUN NN Number=Sing _ _ _ _ 27 vaccine vaccine NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5646 # text = Document 003001421 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001421 003001421 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5647 # text = Control of I kappa B-alpha proteolysis by site-specific, signal-induced phosphorylation. 1 Control Control NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 4 kappa kappa X GW _ _ _ _ _ 5 B- B- X GW _ _ _ _ SpaceAfter=No 6 alpha alpha X GW _ _ _ _ _ 7 proteolysis proteolysis NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 signal signal VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 induced induced VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5648 # text = I kappa B-alpha inhibits transcription factor NF-kappa B by retaining it in the cytoplasm. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa X GW _ _ _ _ _ 3 B- B- X GW _ _ _ _ SpaceAfter=No 4 alpha alpha X GW _ _ _ _ _ 5 inhibits inhibits X ADD _ _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 by by SCONJ IN _ _ _ _ _ 13 retaining retain VERB VBG VerbForm=Ger _ _ _ _ 14 it it PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 5649 # text = Various stimuli, typically those associated with stress or pathogens, rapidly inactivate I kappa B-alpha. 1 Various various ADJ JJ Degree=Pos _ _ _ _ 2 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 typically typically ADV RB _ _ _ _ _ 5 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 6 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 stress stress NOUN NN Number=Sing _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 pathogens pathogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 rapidly rapidly ADV RB _ _ _ _ _ 13 inactivate inactivate ADJ JJ Degree=Pos _ _ _ _ 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 15 kappa kappa X GW _ _ _ _ _ 16 B- B- X GW _ _ _ _ SpaceAfter=No 17 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 5650 # text = This liberates NF-kappa B to translocate to the nucleus and initiate transcription of genes important for the defense of the organism. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 liberates liberate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B b PROPN NNP Number=Sing _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 translocate translocate VERB VB VerbForm=Inf _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 initiate initiate ADJ JJ Degree=Pos _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 genes gene NOUN NNS Number=Plur _ _ _ _ 17 important important ADJ JJ Degree=Pos _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 defense defense NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 organism organism NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5651 # text = Activation of NF-kappa B correlates with phosphorylation of I kappa B-alpha and requires the proteolysis of this inhibitor. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B B PROPN NNP Number=Sing _ _ _ _ 7 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B- B- SYM SYM _ _ _ _ SpaceAfter=No 14 alpha alpha NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 proteolysis proteolysis NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 21 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5652 # text = When either serine-32 or serine-36 of I kappa B-alpha was mutated, the protein did not undergo signal-induced phosphorylation or degradation, and NF-kappa B could not be activated. 1 When when ADV WRB PronType=Int _ _ _ _ 2 either either CCONJ CC _ _ _ _ _ 3 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 32 32 NUM CD NumType=Card _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 36 36 NUM CD NumType=Card _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B- B- PUNCT , _ _ _ _ SpaceAfter=No 14 alpha alpha NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 mutated mutate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 undergo undergo ADV RB _ _ _ _ _ 23 signal signal VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappa kappa PROPN NNP Number=Sing _ _ _ _ 34 B b PROPN NNP Number=Sing _ _ _ _ 35 could could AUX MD VerbForm=Fin _ _ _ _ 36 not not PART RB _ _ _ _ _ 37 be be AUX VB VerbForm=Inf _ _ _ _ 38 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 5653 # text = These results suggest that phosphorylation at one or both of these residues is critical for activation of NF-kappa B. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 6 at at ADP IN _ _ _ _ _ 7 one one NUM CD NumType=Card _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 both both DET DT _ _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 12 residues residue NOUN NNS Number=Plur _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 critical critical ADJ JJ Degree=Pos _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa PROPN NNP Number=Sing _ _ _ _ 21 B. B. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5654 # text = Document 003001426 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001426 003001426 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5655 # text = TAR-independent transactivation by Tat in cells derived from the CNS: a novel mechanism of HIV-1 gene regulation. 1 TAR Tar ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 independent independent ADJ JJ Degree=Pos _ _ _ _ 4 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 Tat Tat PROPN NNP Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 CNS Cn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 : : PUNCT : _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 novel novel NOUN NN Number=Sing _ _ _ _ 16 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5656 # text = The Tat protein of human immunodeficiency virus type 1 (HIV-1) is essential for productive infection and is a potential target for antiviral therapy. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Tat Tat PROPN NNP Number=Sing _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 7 virus virus NOUN NN Number=Sing _ _ _ _ 8 type type NOUN NN Number=Sing _ _ _ _ 9 1 1 NUM CD NumType=Card _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 X LS _ _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 essential essential ADJ JJ Degree=Pos _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 productive productive ADJ JJ Degree=Pos _ _ _ _ 19 infection infection NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 potential potential ADJ JJ Degree=Pos _ _ _ _ 24 target target NOUN NN Number=Sing _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 antiviral antiviral ADJ JJ Degree=Pos _ _ _ _ 27 therapy therapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5657 # text = Tat, a potent activator of HIV-1 gene expression, serves to greatly increase the rate of transcription directed by the viral promoter. 1 Tat Tat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 potent potent ADJ JJ Degree=Pos _ _ _ _ 5 activator activator NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 serves serve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 greatly greatly ADV RB _ _ _ _ _ 16 increase increase VERB VB VerbForm=Inf _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 rate rate NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 viral viral ADJ JJ Degree=Pos _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5658 # text = This induction, which seems to be an important component in the progression of acquired immune deficiency syndrome (AIDS), may be due to increased transcriptional initiation, increased transcriptional elongation, or a combination of these processes. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 important important ADJ JJ Degree=Pos _ _ _ _ 10 component component NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 progression progression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 acquired acquire ADJ JJ Degree=Pos _ _ _ _ 16 immune immune ADJ JJ Degree=Pos _ _ _ _ 17 deficiency deficiency NOUN NN Number=Sing _ _ _ _ 18 syndrome syndrome NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 AIDS aids NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 may may AUX MD VerbForm=Fin _ _ _ _ 24 be be AUX VB VerbForm=Inf _ _ _ _ 25 due due ADP IN _ _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 29 initiation initiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 33 elongation elongation NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 or or CCONJ CC _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 combination combination NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 40 processes process NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 5659 # text = Much attention has been focused on the interaction of Tat with a specific RNA target termed TAR (transactivation responsive) which is present in the leader sequence of all HIV-1 mRNAs. 1 Much much ADJ JJ Degree=Pos _ _ _ _ 2 attention attention NOUN NN Number=Sing _ _ _ _ 3 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 focused focus VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 interaction interaction NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 Tat Tat NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 RNA RNa PROPN NNP Number=Sing _ _ _ _ 15 target target AUX VB VerbForm=Inf _ _ _ _ 16 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 TAR Tar NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 20 responsive responsive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 present present ADJ JJ Degree=Pos _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 leader leader NOUN NN Number=Sing _ _ _ _ 28 sequence sequence NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 all all DET DT _ _ _ _ _ 31 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 mRNAs mRNA NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 5660 # text = This interaction is believed to be an important component of the mechanism of transactivation. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 interaction interaction NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 believed believe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 important important ADJ JJ Degree=Pos _ _ _ _ 9 component component NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 transactivation transactivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 5661 # text = In this report we demonstrate that in certain CNS-derived cells 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 certain certain ADJ JJ Degree=Pos _ _ _ _ 9 CNS CNS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ # sent_id = 5662 # text = Tat is capable of activating HIV-1 through a TAR-independent pathway. 1 Tat Tat PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 capable capable ADJ JJ Degree=Pos _ _ _ _ 4 of of SCONJ IN _ _ _ _ _ 5 activating activate VERB VBG VerbForm=Ger _ _ _ _ 6 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 through through ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 TAR Tar NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 independent independent ADJ JJ Degree=Pos _ _ _ _ 14 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 5663 # text = A Tat-responsive element is found upstream within the viral promoter that in glial-derived cell lines allows transactivation in the absence of TAR. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 Tat Tat NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 5 element element NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 9 within within ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 viral viral ADJ JJ Degree=Pos _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 glial glial ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 lines line NOUN NNS Number=Plur _ _ _ _ 20 allows allow VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 absence absence NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 TAR TAR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5664 # text = Deletion mapping and hybrid promoter constructs demonstrate that the newly identified Tat-responsive element corresponds to a sequence within the viral long terminal repeat (LTR) previously identified as the HIV-1 enhancer, or NF-kappa B domain. 1 Deletion Deletion NOUN NN Number=Sing _ _ _ _ 2 mapping mapping NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 hybrid hybrid NOUN NN Number=Sing _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ _ 6 constructs construct NOUN NNS Number=Plur _ _ _ _ 7 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 newly newly ADV RB _ _ _ _ _ 11 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 Tat Tat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 15 element element NOUN NN Number=Sing _ _ _ _ 16 corresponds correspond VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 sequence sequence NOUN NN Number=Sing _ _ _ _ 20 within within ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 viral viral ADJ JJ Degree=Pos _ _ _ _ 23 long long ADJ JJ Degree=Pos _ _ _ _ 24 terminal terminal NOUN NN Number=Sing _ _ _ _ 25 repeat repeat NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 previously previously ADV RB _ _ _ _ _ 30 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 as as ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ _ 36 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 or or CCONJ CC _ _ _ _ _ 39 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 kappa kappa PROPN NNP Number=Sing _ _ _ _ 42 B b PROPN NNP Number=Sing _ _ _ _ 43 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 5665 # text = DNA band-shift analysis reveals NF-kappa B binding activity in glial cells that differs from that present in T lymphoid cells. 1 DNA dna NOUN NN Number=Sing _ _ _ _ 2 band band NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 analysis analysis NOUN NN Number=Sing _ _ _ _ 6 reveals reveal NOUN NNS Number=Plur _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 binding binde VERB VBG VerbForm=Ger _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 glial glial ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 differs differ VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 20 present present NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5666 # text = Further, we observe that TAR-deleted mutants of HIV-1 demonstrate normal late gene expression in glial cells as evidenced by syncytia formation and production of viral p24 antigen. 1 Further further ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 observe observe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 6 TAR Tar ADV RB Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 deleted delet VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 mutants mutant NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 normal normal ADJ JJ Degree=Pos _ _ _ _ 16 late late ADJ JJ Degree=Pos _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 glial glial ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 as as SCONJ IN _ _ _ _ _ 23 evidenced evidence VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 syncytia syncytia NOUN NN Number=Sing _ _ _ _ 26 formation formation NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 production production NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 viral viral ADJ JJ Degree=Pos _ _ _ _ 31 p24 p24 NOUN NN Number=Sing _ _ _ _ 32 antigen antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 5667 # text = (ABSTRACT TRUNCATED AT 250 WORDS) 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 ABSTRACT ABSTRACT X GW _ _ _ _ _ 3 TRUNCATED Truncate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 AT at ADV RB _ _ _ _ _ 5 250 250 NUM CD NumType=Card _ _ _ _ 6 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5668 # text = Document 003001427 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001427 003001427 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5669 # text = Biphasic control of nuclear factor-kappa B activation by the T cell receptor complex: role of tumor necrosis factor alpha. 1 Biphasic Biphasic ADJ JJ Degree=Pos _ _ _ _ 2 control control NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 T T PROPN NNP Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 : : PUNCT : _ _ _ _ _ 17 role role NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 tumor tumor NOUN NN Number=Sing _ _ _ _ 20 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5670 # text = The regulation of nuclear factor (NF)-kappa B activation by the T cell receptor (TcR)/CD3 complex in primary human T cells has been studied at various times after activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 - - PUNCT : _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 T T PROPN NNP Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 TcR TcR NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 /CD3 /CD3 NUM CD NumType=Card _ _ _ _ 22 complex complex NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 primary primary ADJ JJ Degree=Pos _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 T t PROPN NNP Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 30 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 at at ADP IN _ _ _ _ _ 32 various various ADJ JJ Degree=Pos _ _ _ _ 33 times time NOUN NNS Number=Plur _ _ _ _ 34 after after ADP IN _ _ _ _ _ 35 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 5671 # text = Only p50 NF-kappa B protein bound the kappa B element of interleukin-2 receptor (IL-2R) alpha chain promoter on resting T cells. 1 Only only ADV RB _ _ _ _ _ 2 p50 p50 NUM CD NumType=Card _ _ _ _ 3 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 bound bound ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2R 2r PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 chain chain NOUN NN Number=Sing _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ _ 26 on on SCONJ IN _ _ _ _ _ 27 resting rest VERB VBG VerbForm=Ger _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5672 # text = However, immediately after TcR/CD3 cross-linking (after approximately 1 h; immediate) binding of p50.p65 heterodimers was observed. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 immediately immediately ADV RB _ _ _ _ _ 4 after after ADP IN _ _ _ _ _ 5 TcR/ TcR/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 7 cross-linking cross-linking NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 after after ADP IN _ _ _ _ _ 10 approximately approximately ADV RB _ _ _ _ _ 11 1 1 NUM CD NumType=Card _ _ _ _ 12 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ; ; PUNCT , _ _ _ _ _ 14 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 p50.p65 p50.p65 NOUN NN Number=Sing _ _ _ _ 19 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 observed observed VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5673 # text = p50.c-rel heterodimers were also detected bound to this sequence at early time points (7-16 h; early), and both remained active at later time points (40 h; late) after activation. 1 p50.c p50.c ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 -rel -rel ADJ JJ Degree=Pos _ _ _ _ 3 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 bound bound ADJ JJ Degree=Pos _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 10 sequence sequence NOUN NN Number=Sing _ _ _ _ 11 at at ADP IN _ _ _ _ _ 12 early early ADJ JJ Degree=Pos _ _ _ _ 13 time time NOUN NN Number=Sing _ _ _ _ 14 points point NOUN NNS Number=Plur _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 16 16 NUM CD NumType=Card _ _ _ _ 19 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ; ; PUNCT , _ _ _ _ _ 21 early early ADV RB Degree=Pos _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 both both ADV RB _ _ _ _ _ 26 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 active active ADJ JJ Degree=Pos _ _ _ _ 28 at at ADP IN _ _ _ _ _ 29 later later ADJ JJR Degree=Cmp _ _ _ _ 30 time time NOUN NN Number=Sing _ _ _ _ 31 points point NOUN NNS Number=Plur _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 40 40 NUM CD NumType=Card _ _ _ _ 34 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ; ; PUNCT , _ _ _ _ _ 36 late late ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 after after ADP IN _ _ _ _ _ 39 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 5674 # text = This regulation takes place mainly at the level of nuclear translocation of p65 and c-rel, at immediate and early time points. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 takes take VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 place place NOUN NN Number=Sing _ _ _ _ 5 mainly mainly ADV RB _ _ _ _ _ 6 at at ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 level level NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 translocation translocation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 p65 p65 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 c- c- SYM NFP _ _ _ _ SpaceAfter=No 16 rel rel ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 at at ADP IN _ _ _ _ _ 19 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 early early ADJ JJ Degree=Pos _ _ _ _ 22 time time NOUN NN Number=Sing _ _ _ _ 23 points point NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5675 # text = Activation also induced c-rel and p105/p50 mRNA synthesis, but not p65 mRNA whose expression was constitutive. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 c- c- SYM NFP _ _ _ _ SpaceAfter=No 5 rel rel NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 p105 p105 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 p50 p50 NUM CD NumType=Card _ _ _ _ 10 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 11 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 not not ADV RB _ _ _ _ _ 15 p65 p65 NUM CD NumType=Card _ _ _ _ 16 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 17 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 constitutive constitutive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5676 # text = Interestingly, all those early and late events, but not the immediate ones, were inhibited by a neutralizing anti-tumor necrosis factor alpha (TNF-alpha) monoclonal antibody. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 all all DET DT _ _ _ _ _ 4 those those DET DT Number=Plur|PronType=Dem _ _ _ _ 5 early early ADJ JJ Degree=Pos _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 late late ADJ JJ Degree=Pos _ _ _ _ 8 events event NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 but but CCONJ CC _ _ _ _ _ 11 not not ADV RB _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 14 ones one NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 neutralizing neutralize NOUN NN Number=Sing _ _ _ _ 21 anti-tumor anti-tumor ADP IN _ _ _ _ _ 22 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ _ 24 alpha alpha NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 31 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 5677 # text = Similarly, cycloheximide prevented the p65 and c-rel translocation and consequent formation of active binding heterodimers, at early and late times. 1 Similarly similarly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ _ 4 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 p65 p65 NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 c- c- SYM NFP _ _ _ _ SpaceAfter=No 9 rel rel NOUN NN Number=Sing _ _ _ _ 10 translocation translocation NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 consequent consequent ADJ JJ Degree=Pos _ _ _ _ 13 formation formation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 active active ADJ JJ Degree=Pos _ _ _ _ 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 at at ADP IN _ _ _ _ _ 20 early early ADJ JJ Degree=Pos _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 late late ADJ JJ Degree=Pos _ _ _ _ 23 times time NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5678 # text = Cyclosporin 1 Cyclosporin Cyclosporin PROPN NNP Number=Sing _ _ _ _ # sent_id = 5679 # text = A impaired not only early and late, but also immediate events; however, addition of TNF-alpha prevented all inhibition. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 impaired impaire ADJ JJ Degree=Pos _ _ _ _ 3 not not ADV RB _ _ _ _ _ 4 only only ADV RB _ _ _ _ _ 5 early early ADJ JJ Degree=Pos _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 late late ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 also also ADV RB _ _ _ _ _ 11 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 12 events event NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 ; ; PUNCT , _ _ _ _ _ 14 however however ADV RB _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 addition addition NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 alpha alpha X FW Foreign=Yes _ _ _ _ 21 prevented prevent VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 all all DET DT _ _ _ _ _ 23 inhibition inhibition NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5680 # text = These results indicate that the regulation of NF-kappa B activation during T cell activation by TcR/CD3 signals is biphasic: TcR/CD3 triggers its immediate translocation, which is transient if no TNF-alpha is present. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 regulation regulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 during during ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 TcR/CD3 TcR/CD3 NUM CD NumType=Card _ _ _ _ 19 signals signal NOUN NNS Number=Plur _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 biphasic biphasic NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 : : PUNCT : _ _ _ _ _ 23 TcR/CD3 TcR/CD3 NUM CD NumType=Card _ _ _ _ 24 triggers trigger NOUN NNS Number=Plur _ _ _ _ 25 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 26 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 27 translocation translocation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 which which PRON WDT PronType=Rel _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 transient transient VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 if if SCONJ IN _ _ _ _ _ 33 no no DET DT _ _ _ _ _ 34 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 alpha alpha NOUN NN Number=Sing _ _ _ _ 37 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 present present ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 5681 # text = TNF-alpha, therefore, emerges as the main factor responsible for a second phase of NF-kappa B regulation, controlling both translocation of p65 and c-rel, and new mRNA synthesis for c-rel and p105/p50. 1 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 therefore therefore ADV RB _ _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 emerges emerge NOUN NNS Number=Plur _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 main main ADJ JJ Degree=Pos _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 16 phase phase NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa PROPN NNP Number=Sing _ _ _ _ 21 B b PROPN NNP Number=Sing _ _ _ _ 22 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 controlling controlle VERB VBG VerbForm=Ger _ _ _ _ 25 both both DET DT _ _ _ _ _ 26 translocation translocation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 p65 p65 NUM CD NumType=Card _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 c- c- SYM NFP _ _ _ _ SpaceAfter=No 31 rel rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 new new ADJ JJ Degree=Pos _ _ _ _ 35 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 36 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 c- c- SYM NFP _ _ _ _ SpaceAfter=No 39 rel rel NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 p105 p105 NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 / / PUNCT , _ _ _ _ SpaceAfter=No 43 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5682 # text = Document 003001429 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001429 003001429 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5683 # text = ATF1 and CREB trans-activate a cell cycle regulated histone 1 ATF1 Atf1 PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 CREB Creb PROPN NNP Number=Sing _ _ _ _ 4 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 - - PUNCT : _ _ _ _ SpaceAfter=No 6 activate activate VERB VB VerbForm=Inf _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 cycle cycle NOUN NN Number=Sing _ _ _ _ 10 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 histone histone NOUN NN Number=Sing _ _ _ _ # sent_id = 5684 # text = H4 gene at a distal nuclear matrix associated promoter element. 1 H4 H4 NUM CD NumType=Card _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 at at ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 distal distal ADJ JJ Degree=Pos _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 matrix matrix NOUN NN Number=Sing _ _ _ _ 8 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5685 # text = Proteins of the ATF/CREB class of transcription factors stimulate gene expression of several cell growth-related genes through protein kinase A-related cAMP response elements. 1 Proteins Protein NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 ATF/CREB ATF/CREB PROPN NNP Number=Sing _ _ _ _ 5 class class NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 stimulate stimulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 gene gene ADJ JJ Degree=Pos _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 several several ADJ JJ Degree=Pos _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 related related ADJ JJ Degree=Pos _ _ _ _ 18 genes gene NOUN NNS Number=Plur _ _ _ _ 19 through through ADP IN _ _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 kinase kinase NOUN NN Number=Sing _ _ _ _ 22 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 related related ADJ JJ Degree=Pos _ _ _ _ 25 cAMP camp NOUN NN Number=Sing _ _ _ _ 26 response response NOUN NN Number=Sing _ _ _ _ 27 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5686 # text = The promoter activity of cell cycle regulated histone 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 promoter promoter NOUN NN Number=Sing _ _ _ _ 3 activity activity NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 cycle cycle NOUN NN Number=Sing _ _ _ _ 7 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 histone histone NOUN NN Number=Sing _ _ _ _ # sent_id = 5687 # text = H4 genes is regulated by at least four principal cis-acting elements which mediate G1/S phase control and/or enhancement of transcription during the cell cycle. 1 H4 H4 NUM CD NumType=Card _ _ _ _ 2 genes gene NOUN NNS Number=Plur _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 at at ADV RB _ _ _ _ _ 7 least least ADV RBS Degree=Sup _ _ _ _ 8 four four NUM CD NumType=Card _ _ _ _ 9 principal principal NOUN NN Number=Sing _ _ _ _ 10 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 -acting -act VERB VBG VerbForm=Ger _ _ _ _ 12 elements element NOUN NNS Number=Plur _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 mediate mediate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 G1/ G1/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 16 S 's PROPN NNP Number=Sing _ _ _ _ 17 phase phase NOUN NN Number=Sing _ _ _ _ 18 control control NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 or or CCONJ CC _ _ _ _ _ 22 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 during during ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5688 # text = Using protein-DNA interaction assays we show that the H4 promoter contains two ATF/CREB recognition motifs which interact with CREB, ATF1, and ATF2 but not with ATF4/CREB2. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 DNA dna NOUN NN Number=Sing _ _ _ _ 5 interaction interaction NOUN NN Number=Sing _ _ _ _ 6 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 8 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 H4 H4 NOUN NN Number=Sing _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 two two NUM CD NumType=Card _ _ _ _ 15 ATF/CREB Atf/creb ADJ JJ Degree=Pos _ _ _ _ 16 recognition recognition NOUN NN Number=Sing _ _ _ _ 17 motifs motif NOUN NNS Number=Plur _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 interact interact VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 ATF1 ATF1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 ATF2 ATF2 NOUN NN Number=Sing _ _ _ _ 27 but but CCONJ CC _ _ _ _ _ 28 not not ADV RB _ _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 ATF4/ Atf4/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 CREB2 Creb2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 5689 # text = One ATF/CRE motif is located in the distal promoter at the nuclear matrix-associated Site IV, and the second motif is present in the proximal promoter at Site I. 1 One one NUM CD NumType=Card _ _ _ _ 2 ATF/CRE Atf/cre NOUN NN Number=Sing _ _ _ _ 3 motif motif NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 distal distal ADJ JJ Degree=Pos _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 at at ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 matrix matrix NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 Site site NOUN NN Number=Sing _ _ _ _ 17 IV iv NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 22 motif motif NOUN NN Number=Sing _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 present present ADJ JJ Degree=Pos _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ _ 29 at at ADP IN _ _ _ _ _ 30 Site site PROPN NNP Number=Sing _ _ _ _ 31 I I PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 5690 # text = Both ATF 1 Both both DET DT _ _ _ _ _ 2 ATF Atf NOUN NN Number=Sing _ _ _ SpaceAfter=No # sent_id = 5691 # text = /CRE motifs overlap binding sequences for the multifunctional YY1 transcription factor, which has previously been shown to be nuclear matrix associated. 1 /CRE /cre ADJ JJ Degree=Pos _ _ _ _ 2 motifs motif NOUN NNS Number=Plur _ _ _ _ 3 overlap overlap VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 sequences sequence NOUN NNS Number=Plur _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 multifunctional multifunctional ADJ JJ Degree=Pos _ _ _ _ 9 YY1 yy1 NOUN NN Number=Sing _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 previously previously ADV RB _ _ _ _ _ 16 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 17 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 matrix matrix NOUN NN Number=Sing _ _ _ _ 22 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 5692 # text = Subnuclear fractionation reveals that there are two ATF1 isoforms which appear to differ with respect to DNA binding activity and partition selectively between nuclear matrix and nonmatrix compartments, consistent with the role of the nuclear matrix in regulating gene expression. 1 Subnuclear Subnuclear ADJ JJ Degree=Pos _ _ _ _ 2 fractionation fractionation NOUN NN Number=Sing _ _ _ _ 3 reveals reveal VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 there there PRON EX _ _ _ _ _ 6 are be VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 ATF1 ATF1 NUM CD NumType=Card _ _ _ _ 9 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 10 which which PRON WDT PronType=Rel _ _ _ _ 11 appear appear VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 differ differ VERB VB VerbForm=Inf _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 respect respect NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 DNA dna NOUN NN Number=Sing _ _ _ _ 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 partition partition NOUN NN Number=Sing _ _ _ _ 22 selectively selectively ADV RB _ _ _ _ _ 23 between between ADP IN _ _ _ _ _ 24 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 25 matrix matrix NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 nonmatrix nonmatrix NOUN NN Number=Sing _ _ _ _ 28 compartments compartment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 role role NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 37 matrix matrix NOUN NN Number=Sing _ _ _ _ 38 in in SCONJ IN _ _ _ _ _ 39 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 40 gene gene ADJ JJ Degree=Pos _ _ _ _ 41 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 5693 # text = Site-directed mutational studies demonstrate that Site I and Site IV together support ATF1- and CREB-induced trans-activation of the H4 promoter. 1 Site- Site- SYM NFP _ _ _ _ SpaceAfter=No 2 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 mutational mutational ADJ JJ Degree=Pos _ _ _ _ 4 studies studie NOUN NNS Number=Plur _ _ _ _ 5 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 Site site PROPN NNP Number=Sing _ _ _ _ 8 I I PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 Site site PROPN NNP Number=Sing _ _ _ _ 11 IV iv PROPN NNP Number=Sing _ _ _ _ 12 together together ADV RB _ _ _ _ _ 13 support support VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 ATF1 Atf1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 CREB Creb NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 trans- trans- SYM NFP _ _ _ _ SpaceAfter=No 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 H4 H4 PROPN NNP Number=Sing _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5694 # text = Thus, our data establish that ATF/CREB factors functionally modulate histone 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 data data NOUN NN Number=Sing _ _ _ _ 5 establish establish VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 ATF/CREB Atf/creb PROPN NNP Number=Sing _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 functionally functionally ADV RB _ _ _ _ _ 10 modulate modulate ADJ JJ Degree=Pos _ _ _ _ 11 histone histone NOUN NN Number=Sing _ _ _ _ # sent_id = 5695 # text = H4 gene transcription at distal and proximal promoter elements. 1 H4 H4 NUM CD NumType=Card _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 at at ADP IN _ _ _ _ _ 5 distal distal ADJ JJ Degree=Pos _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5696 # text = Document 003001432 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001432 003001432 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5697 # text = Transcriptional and post-transcriptional regulation of c-jun expression during monocytic differentiation of human myeloid leukemic cells. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 post post X AFX _ _ _ _ SpaceAfter=No 4 -transcriptional -transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 regulation regulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 c- c- SYM NFP _ _ _ _ SpaceAfter=No 8 jun jun NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 during during ADP IN _ _ _ _ _ 11 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 12 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 16 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5698 # text = AP-1, the polypeptide product of c-jun, recognizes and binds to specific DNA sequences and stimulates transcription of genes responsive to certain growth factors and phorbol esters such as 12-O-tetradecanoylphorbol-13-acetate (TPA). 1 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 polypeptide polypeptide NOUN NN Number=Sing _ _ _ _ 7 product product NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 c- c- SYM NFP _ _ _ _ SpaceAfter=No 10 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 recognizes recognize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 DNA dna NOUN NN Number=Sing _ _ _ _ 18 sequences sequence NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 stimulates stimulate NOUN NNS Number=Plur _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 genes gene NOUN NNS Number=Plur _ _ _ _ 24 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 certain certain ADJ JJ Degree=Pos _ _ _ _ 27 growth growth NOUN NN Number=Sing _ _ _ _ 28 factors factor NOUN NNS Number=Plur _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 31 esters ester NOUN NNS Number=Plur _ _ _ _ 32 such such ADJ JJ Degree=Pos _ _ _ _ 33 as as ADP IN _ _ _ _ _ 34 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 O of INTJ UH _ _ _ _ SpaceAfter=No 37 -tetradecanoylphorbol -tetradecanoylphorbol INTJ UH _ _ _ _ SpaceAfter=No 38 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 -acetate -acetate NOUN NN Number=Sing _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 TPA TPA NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 5699 # text = We studied the effects of TPA on the regulation of c-jun gene expression in HL-60 cells during monocytic differentiation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effects effect NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 TPA TPA NOUN NN Number=Sing _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 regulation regulation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 jun jun NOUN NN Number=Sing _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 60 60 NUM CD NumType=Card _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 during during ADP IN _ _ _ _ _ 22 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 23 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5700 # text = Low levels of c-jun transcripts were detectable in untreated HL-60 leukemic cells, increased significantly by 6 h, and reached near maximal levels by 24 h of exposure to 32 nM TPA. 1 Low low VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 c- c- SYM NFP _ _ _ _ SpaceAfter=No 5 jun jun ADJ JJ Degree=Pos _ _ _ _ 6 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 untreated untreated ADJ JJ Degree=Pos _ _ _ _ 11 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 60 60 NUM CD NumType=Card _ _ _ _ 14 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 significantly significantly ADV RB _ _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 6 6 NUM CD NumType=Card _ _ _ _ 21 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 reached reach VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 near near ADP IN _ _ _ _ _ 26 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 27 levels level NOUN NNS Number=Plur _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 24 24 NUM CD NumType=Card _ _ _ _ 30 h h NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 exposure exposure NOUN NN Number=Sing _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 32 32 NUM CD NumType=Card _ _ _ _ 35 nM nM PROPN NNP Number=Sing _ _ _ _ 36 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 5701 # text = Similar kinetics of c-jun induction by TPA were observed in human U-937 and THP-1 monocytic leukemia cells. 1 Similar similar ADJ JJ Degree=Pos _ _ _ _ 2 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 c- c- SYM NFP _ _ _ _ SpaceAfter=No 5 jun jun NOUN NN Number=Sing _ _ _ _ 6 induction induction NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 TPA TPA PROPN NNP Number=Sing _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 U u PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - SYM SYM _ _ _ _ SpaceAfter=No 15 937 937 NUM CD NumType=Card _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 21 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 5702 # text = Similar findings were obtained with bryostatin 1 (10 nM), another activator of protein kinase C and inducer of monocytic differentiation. 1 Similar similar ADJ JJ Degree=Pos _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 obtained obtain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 bryostatin bryostatin NOUN NN Number=Sing _ _ _ _ 7 1 1 NUM CD NumType=Card _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 10 10 NUM CD NumType=Card _ _ _ _ 10 nM nm NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 another another DET DT _ _ _ _ _ 14 activator activator NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 kinase kinase NOUN NN Number=Sing _ _ _ _ 18 C c NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 inducer inducer NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 23 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5703 # text = Furthermore, 1,25-dihydroxyvitamin D3 (0.5 microM), a structurally distinct agent which also induces HL-60 monocytic differentiation, increased c-jun expression. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 dihydroxyvitamin dihydroxyvitamin NOUN NN Number=Sing _ _ _ _ 6 D3 D3 NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 0.5 0.5 NUM CD NumType=Card _ _ _ _ 9 microM microm NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 structurally structurally ADV RB _ _ _ _ _ 14 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 15 agent agent NOUN NN Number=Sing _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 also also ADV RB _ _ _ _ _ 18 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 HL Hl NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 60 60 NUM CD NumType=Card _ _ _ _ 22 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 23 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 c- c- SYM SYM _ _ _ _ SpaceAfter=No 27 jun jun ADJ JJ Degree=Pos _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5704 # text = TPA treatment of HL-60 cells in the presence of cycloheximide was associated with superinduction of c-jun transcripts. 1 TPA TPA DET DT Definite=Ind|PronType=Art _ _ _ _ 2 treatment treatment NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 60 60 NUM CD NumType=Card _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 presence presence NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 superinduction superinduction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 c- c- SYM NFP _ _ _ _ SpaceAfter=No 19 jun jun NOUN NN Number=Sing _ _ _ _ 20 transcripts transcript NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5705 # text = Run-on analysis demonstrated detectable levels of c-jun gene transcription in untreated HL-60 cells, and that exposure to TPA increases this rate 3.3-fold. 1 Run run PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 on on ADP IN _ _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 7 levels level NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 c- c- SYM NFP _ _ _ _ SpaceAfter=No 10 jun jun NOUN NN Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 untreated untreated ADJ JJ Degree=Pos _ _ _ _ 15 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - SYM SYM _ _ _ _ SpaceAfter=No 17 60 60 NUM CD NumType=Card _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 exposure exposure NOUN NN Number=Sing _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 TPA TPA PROPN NNP Number=Sing _ _ _ _ 25 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 27 rate rate NOUN NN Number=Sing _ _ _ _ 28 3.3 3.3 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 5706 # text = Treatment of HL-60 cells with both TPA and cycloheximide had no effect on the rates of c-jun transcription. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 60 60 NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 both both CCONJ CC _ _ _ _ _ 9 TPA TPa NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ _ 12 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 no no DET DT _ _ _ _ _ 14 effect effect NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 rates rate NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 jun jun NOUN NN Number=Sing _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 5707 # text = The half-life of c-jun RNA as determined by treating HL-60 cells with TPA and actinomycin D was 30 min. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 half half NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 life life NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 c- c- PUNCT : _ _ _ _ SpaceAfter=No 7 jun jun PROPN NNP Number=Sing _ _ _ _ 8 RNA RNa PROPN NNP Number=Sing _ _ _ _ 9 as as ADV RB _ _ _ _ _ 10 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by SCONJ IN _ _ _ _ _ 12 treating treat VERB VBG VerbForm=Ger _ _ _ _ 13 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - SYM SYM _ _ _ _ SpaceAfter=No 15 60 60 NUM CD NumType=Card _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 TPA TPa PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 actinomycin actinomycin PROPN NNP Number=Sing _ _ _ _ 21 D d PROPN NNP Number=Sing _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 30 30 NUM CD NumType=Card _ _ _ _ 24 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5708 # text = In contrast, the half-life of c-jun RNA in TPA-treated HL-60 cells exposed to cycloheximide and actinomycin D was greater than 2 h. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 half half NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 life life NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 c- c- PUNCT : _ _ _ _ SpaceAfter=No 10 jun jun PROPN NNP Number=Sing _ _ _ _ 11 RNA RNA PROPN NNP Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 HL Hl NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 60 60 NUM CD NumType=Card _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 exposed expose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 cycloheximide cycloheximide VERB VB VerbForm=Inf _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 actinomycin actinomycin VERB VB VerbForm=Inf _ _ _ _ 25 D d PROPN NNP Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 greater greater ADJ JJR Degree=Cmp _ _ _ _ 28 than than ADP IN _ _ _ _ _ 29 2 2 NUM CD NumType=Card _ _ _ _ 30 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 5709 # text = These findings suggested that the increase in c-jun RNA observed during TPA-induced monocytic differentiation is mediated by both transcriptional and post-transcriptional mechanisms. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 increase increase NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 c- c- SYM NFP _ _ _ _ SpaceAfter=No 9 jun jun PROPN NNP Number=Sing _ _ _ _ 10 RNA RNA PROPN NNP Number=Sing _ _ _ _ 11 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 during during ADP IN _ _ _ _ _ 13 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 17 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 both both CCONJ CC _ _ _ _ _ 22 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 post post X AFX _ _ _ _ SpaceAfter=No 25 -transcriptional -transcriptional ADJ JJ Degree=Pos _ _ _ _ 26 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5710 # text = Document 003001433 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001433 003001433 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5711 # text = Transcriptional induction of collagenase-1 in differentiated monocyte-like (U937) cells is regulated by AP-1 and an upstream C/EBP-beta site. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 collagenase collagenase NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 differentiated differentiated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 -like -like ADJ JJ Degree=Pos _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 U937 U937 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 24 C/ c/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 EBP- EBP- PUNCT , _ _ _ _ SpaceAfter=No 26 beta beof NOUN NN Number=Sing _ _ _ _ 27 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5712 # text = In this report, we demonstrate that the AP-1 site and a distal promoter element regulate transcriptional induction of collagenase-1 during monocytic differentiation. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 distal distal ADJ JJ Degree=Pos _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 element element NOUN NN Number=Sing _ _ _ _ 18 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 20 induction induction NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 collagenase collagenase NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 during during ADP IN _ _ _ _ _ 26 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 27 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5713 # text = Chloramphenicol acetyltransferase expression constructs containing regions of the human collagenase-1 promoter were stably or transiently transfected into U937 cells, and reporter activity was assessed at various times after the onset of phorbol 12-myristate 13-acetate (PMA)-mediated differentiation. 1 Chloramphenicol Chloramphenicol PROPN NNP Number=Sing _ _ _ _ 2 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 constructs construct NOUN NNS Number=Plur _ _ _ _ 5 containing contain VERB VBG VerbForm=Ger _ _ _ _ 6 regions region NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 collagenase collagenase NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 stably stably ADV RB _ _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 transiently transiently ADV RB _ _ _ _ _ 18 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 into into ADP IN _ _ _ _ _ 20 U937 U937 NOUN NN Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 reporter reporter NOUN NN Number=Sing _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 assessed assess VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 at at ADP IN _ _ _ _ _ 29 various various ADJ JJ Degree=Pos _ _ _ _ 30 times time NOUN NNS Number=Plur _ _ _ _ 31 after after ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 onset onset NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 36 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 - - PUNCT : _ _ _ _ SpaceAfter=No 38 myristate myristate NOUN NN Number=Sing _ _ _ _ 39 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 - - PUNCT : _ _ _ _ SpaceAfter=No 41 acetate acetate NOUN NN Number=Sing _ _ _ _ 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 5714 # text = Rapid and strong induction of promoter activity was lost in constructs with a mutant AP-1 element; however, at 16-96 1 Rapid rapid PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 strong strong ADJ JJ Degree=Pos _ _ _ _ 4 induction induction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 promoter promoter NOUN NN Number=Sing _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 lost lose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 constructs constructs NOUN NNS Number=Plur _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 15 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ; ; PUNCT , _ _ _ _ _ 20 however however ADV RB _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 at at ADP IN _ _ _ _ _ 23 16 16 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - SYM SYM _ _ _ _ SpaceAfter=No 25 96 96 NUM CD NumType=Card _ _ _ _ # sent_id = 5715 # text = h post-PMA, the mutant collagenase-1 promoter displayed AP-1 independent PMA-mediated transactivation. 1 h h INTJ UH _ _ _ _ _ 2 post post VERB VB Mood=Imp|VerbForm=Fin _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 PMA Pma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 8 collagenase collagenase NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 displayed display VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 independent independent ADJ JJ Degree=Pos _ _ _ _ 17 PMA Pma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 transactivation transactivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5716 # text = The AP-1 mutant constructs also showed delayed transcriptional activation in PMA-treated fibroblasts. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 mutant mutant NOUN NN Number=Sing _ _ _ _ 6 constructs construct NOUN NNS Number=Plur _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 delayed delay ADJ JJ Degree=Pos _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 5717 # text = Western and supershift analyses indicated that functional Jun and Fos proteins were present in nuclear extracts of PMA-differentiated U937 cells. 1 Western western ADJ JJ Degree=Pos _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 supershift supershift ADJ JJ Degree=Pos _ _ _ _ 4 analyses analysis NOUN NNS Number=Plur _ _ _ _ 5 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 functional functional ADJ JJ Degree=Pos _ _ _ _ 8 Jun Jun PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 Fos Fos PROPN NNP Number=Sing _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 present presend ADJ JJ Degree=Pos _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 extracts extract NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 differentiated differentiate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 U937 U937 NUM CD NumType=Card _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 5718 # text = Promoter deletion constructs demonstrated the potential role of distal promoter sequences in regulating collagenase-1 transcription. 1 Promoter Promoter NOUN NN Number=Sing _ _ _ _ 2 deletion deletion NOUN NN Number=Sing _ _ _ _ 3 constructs construct NOUN NNS Number=Plur _ _ _ _ 4 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 potential potential ADJ JJ Degree=Pos _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 distal distal ADJ JJ Degree=Pos _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 sequences sequence NOUN NNS Number=Plur _ _ _ _ 12 in in SCONJ IN _ _ _ _ _ 13 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 14 collagenase collagenase NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 5719 # text = In particular, Western, supershift, and promoter deletion analyses suggested a role for CCAAT/enhancer-binding protein-beta (C/EBP-beta) binding site between -2010 and -1954 in regulating transcription of collagenase-1 in monocytic cells. 1 In in ADP IN _ _ _ _ _ 2 particular particular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 Western western ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 supershift supershift ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 promoter promoter VERB VB VerbForm=Inf _ _ _ _ 10 deletion deletion NOUN NN Number=Sing _ _ _ _ 11 analyses analysis NOUN NNS Number=Plur _ _ _ _ 12 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 role role NOUN NN Number=Sing _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 CCAAT CCAAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 binding binding VERB VBG VerbForm=Ger _ _ _ _ 21 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 22 beta beta NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 C/ Cith NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 EBP Ebp NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 binding bind VERB VBG VerbForm=Ger _ _ _ _ 30 site site NOUN NN Number=Sing _ _ _ _ 31 between between ADP IN _ _ _ _ _ 32 - - SYM SYM _ _ _ _ SpaceAfter=No 33 2010 2010 NUM CD NumType=Card _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 - - SYM SYM _ _ _ _ SpaceAfter=No 36 1954 1954 NUM CD NumType=Card _ _ _ _ 37 in in SCONJ IN _ _ _ _ _ 38 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 39 transcription transcription NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 collagenase collagenase NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 1 1 NUM CD NumType=Card _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 46 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 5720 # text = Our findings suggest that distinct regulatory elements, acting somewhat independently of each other, control expression of collagenase-1. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 6 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 7 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 acting act VERB VBG VerbForm=Ger _ _ _ _ 10 somewhat somewhat ADV RB _ _ _ _ _ 11 independently independently ADV RB _ _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 each each DET DT _ _ _ _ _ 14 other other ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 control control NOUN NN Number=Sing _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 collagenase collagenase NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5721 # text = In addition, our data suggests that the rapid PMA-mediated induction of collagenase-1 transcription is controlled by a mechanism distinct from that regulating the sustained expression of this proteinase in activated macrophages. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 5 data data NOUN NN Number=Sing _ _ _ _ 6 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 10 PMA Pma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 induction induction NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 collagenase collagenase NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 controlled controll VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 24 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 25 from from ADP IN _ _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 sustained sustain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 33 proteinase proteinase NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5722 # text = Document 003001436 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001436 003001436 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5723 # text = Cloning of a mitogen-inducible gene encoding a kappa B DNA-binding protein with homology to the rel oncogene and to cell-cycle motifs. 1 Cloning Cloning VERB VBG VerbForm=Ger _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 mitogen mitogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 binding binding VERB VBG VerbForm=Ger _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 homology homology NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 rel rel NOUN NN Number=Sing _ _ _ _ 21 oncogene oncogene NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 cycle cycle NOUN NN Number=Sing _ _ _ _ 27 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5724 # text = We have cloned and characterized a mitogen-inducible gene isolated from human T cells that predicts a protein of 968 amino acids. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 mitogen mitogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 predicts predict VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 968 968 NUM CD NumType=Card _ _ _ _ 22 amino amino DET DT _ _ _ _ _ 23 acids acid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5725 # text = The amino-terminal domain has regions homologous to the oncogene rel and to the developmentally important gene dorsal of Drosophila. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 amino amino NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 5 domain domain NOUN NN Number=Sing _ _ _ _ 6 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 regions region NOUN NNS Number=Plur _ _ _ _ 8 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 oncogene oncogene ADJ JJ Degree=Pos _ _ _ _ 12 rel rel NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 developmentally developmentally ADV RB _ _ _ _ _ 17 important important ADJ JJ Degree=Pos _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 dorsal dorsal NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 Drosophila Drosophila PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5726 # text = The carboxy-terminal domain contains repeat structures found in a variety of proteins that are involved in cell-cycle control of yeast and in tissue differentiation in Drosophila and Ceanorhabditis elegans, as well as in the putative human oncogene bcl-3 and in the ankyrin protein. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 carboxy carboxy NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 5 domain domain NOUN NN Number=Sing _ _ _ _ 6 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 repeat repeat ADJ JJ Degree=Pos _ _ _ _ 8 structures structure NOUN NNS Number=Plur _ _ _ _ 9 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 variety variety NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 proteins protein NOUN NNS Number=Plur _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 involved involved ADJ JJ Degree=Pos _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 cycle cycle NOUN NN Number=Sing _ _ _ _ 22 control control NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 yeast yeast NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 tissue tissue ADJ JJ Degree=Pos _ _ _ _ 28 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 Drosophila Drosophila PROPN NNP Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 Ceanorhabditis Ceanorhabditis PROPN NNP Number=Sing _ _ _ _ 33 elegans elegan PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 as as ADV RB _ _ _ _ _ 36 well well ADV RB Degree=Pos _ _ _ _ 37 as as ADP IN _ _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 putative putative ADJ JJ Degree=Pos _ _ _ _ 41 human human ADJ JJ Degree=Pos _ _ _ _ 42 oncogene oncogene ADJ JJ Degree=Pos _ _ _ _ 43 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT , _ _ _ _ SpaceAfter=No 45 3 3 NUM CD NumType=Card _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 ankyrin ankyrin ADJ JJ Degree=Pos _ _ _ _ 50 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 5727 # text = A truncated form of the product of this gene translated in vitro is a DNA-binding protein which interacts specifically with the kappa B binding site found in many inducible genes, including the enhancer in human immunodeficiency virus. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 truncated truncated ADJ JJ Degree=Pos _ _ _ _ 3 form form NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 product product NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 translated translate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 vitro vitro NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 binding binding VERB VBG VerbForm=Ger _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 interacts interact VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 specifically specifically ADV RB _ _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ _ 26 binding bind VERB VBG VerbForm=Ger _ _ _ _ 27 site site NOUN NN Number=Sing _ _ _ _ 28 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 many many ADJ JJ Degree=Pos _ _ _ _ 31 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 32 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 including include VERB VBG VerbForm=Ger _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 human human ADJ JJ Degree=Pos _ _ _ _ 39 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 40 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 5728 # text = This gene is yet another in a growing list of important regulatory molecules whose expression is transcriptionally induced upon cellular activation. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 yet yet ADV RB _ _ _ _ _ 5 another another DET DT _ _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 growing grow VERB VBG VerbForm=Ger _ _ _ _ 9 list list NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 important important ADJ JJ Degree=Pos _ _ _ _ 12 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 13 molecules molecule NOUN NNS Number=Plur _ _ _ _ 14 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 transcriptionally transcriptionally ADV RB _ _ _ _ _ 18 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 upon upon ADP IN _ _ _ _ _ 20 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5729 # text = Document 003001437 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001437 003001437 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5730 # text = NF-kappa 1 NF NF ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 5731 # text = B/Rel family members regulating the ICAM-1 promoter in monocytic THP-1 cells. 1 B benefit ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 / / PUNCT , _ _ _ _ SpaceAfter=No 3 Rel Rel ADJ JJ Degree=Pos _ _ _ _ 4 family family NOUN NN Number=Sing _ _ _ _ 5 members member NOUN NNS Number=Plur _ _ _ _ 6 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 14 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5732 # text = A kappa B-site was identified in the promoter of the intercellular adhesion molecule-1 (ICAM-1) gene, which is involved in regulation of ICAM-1 expression by tumor necrosis factor alpha (TNF-alpha) and glucocorticoids. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 kappa kappa NOUN NN Number=Sing _ _ _ _ 3 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 site site NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 intercellular intercellular ADJ JJ Degree=Pos _ _ _ _ 14 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 15 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 which which PRON WDT PronType=Rel _ _ _ _ 26 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 involved involved VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 regulation regulation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 ICAM ICAM NUM CD NumType=Card _ _ _ SpaceAfter=No 32 - - SYM SYM _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 tumor tumor NOUN NN Number=Sing _ _ _ _ 37 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 38 factor factor NOUN NN Number=Sing _ _ _ _ 39 alpha alpha NOUN NN Number=Sing _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 5733 # text = We now report on the transcription factors which bind and transactivate this enhancer sequence. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 now now ADV RB _ _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factors factor NOUN NNS Number=Plur _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 transactivate transactivate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 13 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 14 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 5734 # text = In vitro, the ICAM-1 kappa B site appeared to bind RelA and c-Rel homodimers as well as heterodimers with NF-kappa B1, but weakly NF-kappa B1 homodimers. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 site site NOUN NN Number=Sing _ _ _ _ 11 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 bind bind VERB VB VerbForm=Inf _ _ _ _ 14 RelA Rela NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 Rel Rel NOUN NN Number=Sing _ _ _ _ 19 homodimers homodimer NOUN NNS Number=Plur _ _ _ _ 20 as as ADV RB _ _ _ _ _ 21 well well ADV RB Degree=Pos _ _ _ _ 22 as as ADP IN _ _ _ _ _ 23 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa PROPN NNP Number=Sing _ _ _ _ 28 B1 B1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 but but CCONJ CC _ _ _ _ _ 31 weakly weakly ADV RB _ _ _ _ _ 32 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappa kappa NOUN NN Number=Sing _ _ _ _ 35 B1 B1 NOUN NN Number=Sing _ _ _ _ 36 homodimers homodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 5735 # text = In addition, both RelA and c-Rel, but not NF-kappa B1, were shown to transactivate an ICAM-1 kappa B-reporter construct. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 both both CCONJ CC _ _ _ _ _ 5 RelA Rela NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 not not ADV RB _ _ _ _ _ 13 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B1 b1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 transactivate transactivate VERB VB VerbForm=Inf _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 kappa kappa NOUN NN Number=Sing _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 reporter reporter NOUN NN Number=Sing _ _ _ _ 30 construct construct NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 5736 # text = In monocytic THP-1 cells TNF-alpha induced two nuclear complexes which in vitro bound to the ICAM-1 kappa B site. 1 In in ADP IN _ _ _ _ _ 2 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 3 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 TNF Tnf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 alpha alpha X FW Foreign=Yes _ _ _ _ 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 two two NUM CD NumType=Card _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 complexes complexe NOUN NNS Number=Plur _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 vitro vitro NOUN NN Number=Sing _ _ _ _ 17 bound bound ADJ JJ Degree=Pos _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 kappa kappa NOUN NN Number=Sing _ _ _ _ 24 B b NOUN NN Number=Sing _ _ _ _ 25 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5737 # text = Using antibodies in an electrophoretic mobility supershift assay, one of these complexes was shown to contain NF-kappa B1 and RelA, and to bind with higher affinity to the consensus kappa B site in the HIV long terminal repeat. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 6 mobility mobility NOUN NN Number=Sing _ _ _ _ 7 supershift supershift NOUN NN Number=Sing _ _ _ _ 8 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 one one NUM CD NumType=Card _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 13 complexes complex NOUN NNS Number=Plur _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 contain contain VERB VB VerbForm=Inf _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa PROPN NNP Number=Sing _ _ _ _ 21 B1 B1 PROPN NNP Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 RelA RelA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 bind bind VERB VB VerbForm=Inf _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 higher higher ADJ JJR Degree=Cmp _ _ _ _ 30 affinity affinity NOUN NN Number=Sing _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 consensus consensus NOUN NN Number=Sing _ _ _ _ 34 kappa kappa NOUN NN Number=Sing _ _ _ _ 35 B b NOUN NN Number=Sing _ _ _ _ 36 site site NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 HIV HIV PROPN NNP Number=Sing _ _ _ _ 40 long long ADJ JJ Degree=Pos _ _ _ _ 41 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 42 repeat repeat NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 5738 # text = The second complex contained RelA, and exhibited higher affinity towards the ICAM-1 kappa B than to the HIV kappa B site. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 complex complex NOUN NN Number=Sing _ _ _ _ 4 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 RelA Rela PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 exhibited exhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 higher higher ADJ JJR Degree=Cmp _ _ _ _ 10 affinity affinity NOUN NN Number=Sing _ _ _ _ 11 towards towards ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 than than ADP IN _ _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 HIV HIV PROPN NNP Number=Sing _ _ _ _ 22 kappa kappa PROPN NNP Number=Sing _ _ _ _ 23 B b PROPN NNP Number=Sing _ _ _ _ 24 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5739 # text = The glucocorticoid receptor was shown to repress activity of both the RelA homodimer and the NF-kappa B1/RelA heterodimer. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 3 receptor receptor NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 repress repress VERB VB VerbForm=Inf _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 both both CCONJ CC _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 RelA Rela NOUN NN Number=Sing _ _ _ _ 13 homodimer homodimer NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B1 b1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 RelA Rela DET DT Definite=Ind|PronType=Art _ _ _ _ 22 heterodimer heterodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 5740 # text = We argue that in vivo RelA homodimers are likely to play a dominant role in TNF-alpha-induced ICAM-1 transcription in monocytic cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 argue argue VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 vivo vivo ADJ JJ Degree=Pos _ _ _ _ 6 RelA Rela NOUN NN Number=Sing _ _ _ _ 7 homodimers homodimer NOUN NNS Number=Plur _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 likely likely ADJ JJ Degree=Pos _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 play play VERB VB VerbForm=Inf _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 14 role role NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 19 -induced -induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5741 # text = Document 003001441 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001441 003001441 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5742 # text = Activity of the kappa B enhancer of the interleukin-2 receptor alpha chain in somatic cell hybrids is accompanied by the nuclear localization of NF-kappa B. 1 Activity activity NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 chain chain NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 somatic somatic ADJ JJ Degree=Pos _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 hybrids hybrid NOUN NNS Number=Plur _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 24 localization localization NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5743 # text = The two nuclear proteins NF-kappa B (consisting of subunits p50 and p65) and the DNA-binding subunit of NF-kappa B (p50) by itself, also called KBF1, are constitutively expressed and localized in the nucleus of the human T-cell line IARC 301.5. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 proteins protein NOUN NNS Number=Plur _ _ _ _ 5 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 consisting consisting VERB VBG VerbForm=Ger _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 subunits subunit NOUN NNS Number=Plur _ _ _ _ 13 p50 p50 NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 binding binding VERB VBG VerbForm=Ger _ _ _ _ 22 subunit subunit NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa PROPN NNP Number=Sing _ _ _ _ 27 B B PROPN NNP Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 itself itself PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs|Reflex=Yes _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 also also ADV RB _ _ _ _ _ 35 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 KBF1 Kbf1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 39 constitutively constitutively ADV RB _ _ _ _ _ 40 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 localized localize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 human human ADJ JJ Degree=Pos _ _ _ _ 49 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 cell cell NOUN NN Number=Sing _ _ _ _ 51 line line NOUN NN Number=Sing _ _ _ _ 52 IARC Iarc NOUN NN Number=Sing _ _ _ _ 53 301.5 301.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 5744 # text = In order to define the roles of these two factors, which bind to the same kappa B enhancers, in transcription activation we have prepared somatic cell hybrids between IARC 301.5 and a murine myeloma. 1 In in ADP IN _ _ _ _ _ 2 order order NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 define define VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 roles role NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 9 two two NUM CD NumType=Card _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 same same ADJ JJ Degree=Pos _ _ _ _ 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 enhancers enhancer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 25 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 somatic somatic ADJ JJ Degree=Pos _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 hybrids hybrid NOUN NNS Number=Plur _ _ _ _ 30 between between ADP IN _ _ _ _ _ 31 IARC IARC PROPN NNP Number=Sing _ _ _ _ 32 301.5 301.5 NUM CD NumType=Card _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 murine murine NOUN NN Number=Sing _ _ _ _ 36 myeloma myeloma NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 5745 # text = Most hybrids express both KBF1 and NF-kappa B in their nuclei, but one hybrid expresses only KBF1. 1 Most most ADJ JJS Degree=Sup _ _ _ _ 2 hybrids hybrid NOUN NNS Number=Plur _ _ _ _ 3 express express ADJ JJ Degree=Pos _ _ _ _ 4 both both CCONJ CC _ _ _ _ _ 5 KBF1 KBF1 PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 nuclei nuclei NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 one one NUM CD NumType=Card _ _ _ _ 17 hybrid hybrid NOUN NN Number=Sing _ _ _ _ 18 expresses express NOUN NNS Number=Plur _ _ _ _ 19 only only ADV RB _ _ _ _ _ 20 KBF1 KBF1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5746 # text = The kappa B enhancer of the gene encoding the interleukin-2 (IL-2) receptor alpha chain (IL-2R alpha) is functional only in the hybrids expressing nuclear NF-kappa B. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 kappa kappa NOUN NN Number=Sing _ _ _ _ 3 B b NOUN NN Number=Sing _ _ _ _ 4 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 receptor receptor NOUN NN Number=Sing _ _ _ _ 19 alpha alpha NOUN NN Number=Sing _ _ _ _ 20 chain chain NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2R 2r NOUN NN Number=Sing _ _ _ _ 25 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 functional functional ADJ JJ Degree=Pos _ _ _ _ 29 only only ADV RB _ _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 hybrids hybrid NOUN NNS Number=Plur _ _ _ _ 33 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 34 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 35 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 kappa kappa PROPN NNP Number=Sing _ _ _ _ 38 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 5747 # text = These findings show that nuclear NF-kappa B is necessary to activate the kappa B enhancer, while KBF1 by itself is not sufficient. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 activate activate VERB VB VerbForm=Inf _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 while while SCONJ IN _ _ _ _ _ 20 KBF1 KBF1 NUM CD NumType=Card _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 itself itself PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs|Reflex=Yes _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 not not PART RB _ _ _ _ _ 25 sufficient sufficient ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5748 # text = We propose that KBF1 is a competitive inhibitor of NF-kappa B and discuss how these factors may be involved in the transient expression of IL-2 and IL-2R alpha genes during the immune response. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 KBF1 KBF1 PROPN NNP Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 competitive competitive ADJ JJ Degree=Pos _ _ _ _ 8 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 discuss discuss VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 how how ADV WRB PronType=Int _ _ _ _ 17 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 18 factors factor NOUN NNS Number=Plur _ _ _ _ 19 may may AUX MD VerbForm=Fin _ _ _ _ 20 be be AUX VB VerbForm=Inf _ _ _ _ 21 involved involved ADJ JJ Degree=Pos _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 transient transient ADJ JJ Degree=Pos _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 2 2 NUM CD NumType=Card _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 2R 2r NOUN NN Number=Sing _ _ _ _ 34 alpha alpha ADP IN _ _ _ _ _ 35 genes gene NOUN NNS Number=Plur _ _ _ _ 36 during during ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 immune immune ADJ JJ Degree=Pos _ _ _ _ 39 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5749 # text = Document 003001444 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001444 003001444 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5750 # text = Differential regulation of proto-oncogenes c-jun and c-fos in T lymphocytes activated through CD28. 1 Differential differential ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 oncogenes oncogene NOUN NNS Number=Plur _ _ _ _ 7 c- c- PUNCT : _ _ _ _ SpaceAfter=No 8 jun jun NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 fos fo NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 T T PROPN NNP Number=Sing _ _ _ _ 15 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 16 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 through through ADP IN _ _ _ _ _ 18 CD28 CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5751 # text = The T cell surface molecule CD28 binds to ligands on accessory cells and APCs, playing an important costimulatory role in the response of T cells to Ags. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 T T PROPN NNP Number=Sing _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 surface surface NOUN NN Number=Sing _ _ _ _ 5 molecule molecule NOUN NN Number=Sing _ _ _ _ 6 CD28 CD28 NUM CD NumType=Card _ _ _ _ 7 binds bind NOUN NNS Number=Plur _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 ligands ligand NOUN NNS Number=Plur _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 accessory accessory ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 APCs APC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 playing play VERB VBG VerbForm=Ger _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 important important ADJ JJ Degree=Pos _ _ _ _ 19 costimulatory costimulatory NOUN NN Number=Sing _ _ _ _ 20 role role NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 Ags ag NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5752 # text = Our knowledge of the intracellular signaling pathways coupled to this receptor is incomplete. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 knowledge knowledge NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 6 signaling signaling NOUN NN Number=Sing _ _ _ _ 7 pathways pathway NOUN NNS Number=Plur _ _ _ _ 8 coupled couple VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 incomplete incomplete ADV RB _ _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 5753 # text = In addition to activation of phospholipase C gamma 1, ligation of this receptor also seems to activate a calcium-independent, CD28-specific pathway. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 phospholipase phospholipase NOUN NN Number=Sing _ _ _ _ 7 C C PROPN NNP Number=Sing _ _ _ _ 8 gamma gamma NOUN NN Number=Sing _ _ _ _ 9 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 ligation ligation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 also also ADV RB _ _ _ _ _ 16 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 activate activate VERB VB VerbForm=Inf _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 independent independent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 CD28 CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 26 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5754 # text = In this paper, we report that cross-linking of CD28 (but not CD2, CD5, LFA-1, or CD7) leads to an elevation of c-jun mRNA, with only minimal activation of c-fos expression. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 paper paper NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 -linking -link NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 but but CCONJ CC _ _ _ _ _ 14 not not ADV RB _ _ _ _ _ 15 CD2 CD2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 CD5 CD5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 LFA LFA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 CD7 CD7 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 elevation elevation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 c- c- SYM NFP _ _ _ _ SpaceAfter=No 32 jun jun NOUN NN Number=Sing _ _ _ _ 33 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 only only ADV RB _ _ _ _ _ 37 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 38 activation activation NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 fos fo NOUN NNS Number=Plur _ _ _ _ 43 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 5755 # text = CD28-dependent induction of c-jun expression requires protein tyrosine kinase activity, but does not depend on activation of a phorbol ester-responsive protein kinase C or elevation of cytosolic calcium. 1 CD28 CD28 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 -dependent -dependent ADJ JJ Degree=Pos _ _ _ _ 3 induction induction NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 c- c- SYM NFP _ _ _ _ SpaceAfter=No 6 jun jun NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 depend depend VERB VB VerbForm=Inf _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 23 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ _ 27 kinase kinase NOUN NN Number=Sing _ _ _ _ 28 C c NOUN NN Number=Sing _ _ _ _ 29 or or CCONJ CC _ _ _ _ _ 30 elevation elevation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 33 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 5756 # text = Furthermore, CD28-dependent elevation of c-jun mRNA does not appear to be mediated at the level of mRNA stability. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 CD28 CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 -dependent -dependent ADJ JJ Degree=Pos _ _ _ _ 5 elevation elevation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 c- c- SYM NFP _ _ _ _ SpaceAfter=No 8 jun jun NOUN NN Number=Sing _ _ _ _ 9 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 10 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 appear appear VERB VB VerbForm=Inf _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 at at ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 level level NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 mRNA mRNA DET DT Definite=Ind|PronType=Art _ _ _ _ 21 stability stability NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5757 # text = A mechanism is suggested whereby expression of c-jun and junB, in the absence of members of the fos family, can prevent inappropriate activation of T cells caused by ligation of CD28 in the absence of a specific antigenic stimulus. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 suggested suggest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 whereby whereby ADP IN _ _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 c- c- SYM NFP _ _ _ _ SpaceAfter=No 9 jun jun NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 junB junb NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 absence absence NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 members member NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 fos fo NOUN NNS Number=Plur _ _ _ _ 21 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 can can AUX MD VerbForm=Fin _ _ _ _ 24 prevent prevent VERB VB VerbForm=Inf _ _ _ _ 25 inappropriate inappropriate ADJ JJ Degree=Pos _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 caused cause VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 ligation ligation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 absence absence NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 specific specific ADJ JJ Degree=Pos _ _ _ _ 41 antigenic antigenic ADJ JJ Degree=Pos _ _ _ _ 42 stimulus stimulus NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5758 # text = Document 003001449 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001449 003001449 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5759 # text = Antioxidants inhibit monocyte adhesion by suppressing nuclear factor-kappa B mobilization and induction of vascular cell adhesion molecule-1 in endothelial cells stimulated to generate radicals. 1 Antioxidants Antioxidant NOUN NNS Number=Plur _ _ _ _ 2 inhibit inhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 monocyte monocyte ADJ JJ Degree=Pos _ _ _ _ 4 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 5 by by SCONJ IN _ _ _ _ _ 6 suppressing suppresse VERB VBG VerbForm=Ger _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 mobilization mobilization NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 induction induction NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 19 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 generate generate VERB VB VerbForm=Inf _ _ _ _ 28 radicals radical NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5760 # text = Cell adhesion to endothelial cells stimulated by tumor necrosis factor-alpha (TNF) is due to induction of surface receptors, such as vascular cell adhesion molecule-1 (VCAM-1). 1 Cell cell NOUN NN Number=Sing _ _ _ _ 2 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 tumor tumor NOUN NN Number=Sing _ _ _ _ 9 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 alpha alpha NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 due due ADP IN _ _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 induction induction NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 surface surface NOUN NN Number=Sing _ _ _ _ 22 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 such such ADJ JJ Degree=Pos _ _ _ _ 25 as as ADP IN _ _ _ _ _ 26 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 29 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 5761 # text = The antioxidant pyrrolidine dithiocarbamate (PDTC) specifically inhibits activation of nuclear factor-kappa B (NF-kappa B). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 antioxidant antioxidant ADJ JJ Degree=Pos _ _ _ _ 3 pyrrolidine pyrrolidine NOUN NN Number=Sing _ _ _ _ 4 dithiocarbamate dithiocarbamate NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 PDTC PDTC NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 specifically specifically ADV RB _ _ _ _ _ 9 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 5762 # text = Since kappa B motifs are present in VCAM-1 and intercellular adhesion molecule-1 (ICAM-1) promoters, we used PDTC to study the regulatory mechanisms of VCAM-1 and ICAM-1 induction and subsequent monocyte adhesion in TNF-treated human umbilical vein endothelial cells (HUVECs). 1 Since since ADP IN _ _ _ _ _ 2 kappa kappa NOUN NN Number=Sing _ _ _ _ 3 B b NOUN NN Number=Sing _ _ _ _ 4 motifs motif NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 present present ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 intercellular intercellular ADJ JJ Degree=Pos _ _ _ _ 13 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 14 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT : _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 25 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 PDTC PDTC PROPN NNP Number=Sing _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 study study VERB VB VerbForm=Inf _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 31 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ _ 40 induction induction NOUN NN Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 43 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 44 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT , _ _ _ _ SpaceAfter=No 48 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 49 human human ADJ JJ Degree=Pos _ _ _ _ 50 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 51 vein vein NOUN NN Number=Sing _ _ _ _ 52 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 53 cells cell NOUN NNS Number=Plur _ _ _ _ 54 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 55 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 56 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 5763 # text = PDTC or N-acetylcysteine dose dependently reduced TNF-induced VCAM-1 but not ICAM-1 surface protein (also in human umbilical arterial endothelial cells) and mRNA expression (by 70% at 100 mumol/L PDTC) in HUVECs as assessed by flow cytometry and polymerase chain reaction. 1 PDTC Pdtc NOUN NN Number=Sing _ _ _ _ 2 or or CCONJ CC _ _ _ _ _ 3 N- N- PUNCT : _ _ _ _ SpaceAfter=No 4 acetylcysteine acetylcysteine PRON PRP _ _ _ _ _ 5 dose dose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 dependently dependently ADV RB _ _ _ _ _ 7 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 surface surface NOUN NN Number=Sing _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 also also ADV RB _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 26 arterial arterial NOUN NN Number=Sing _ _ _ _ 27 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 by by ADP IN _ _ _ _ _ 35 70 70 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 % % SYM NN Number=Sing _ _ _ _ 37 at at ADP IN _ _ _ _ _ 38 100 100 NUM CD NumType=Card _ _ _ _ 39 mumol/L mumol/L PROPN NNP Number=Sing _ _ _ _ 40 PDTC PDTC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 HUVECs Huvecs PROPN NNP Number=Sing _ _ _ _ 44 as as SCONJ IN _ _ _ _ _ 45 assessed assess VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 by by ADP IN _ _ _ _ _ 47 flow flow NOUN NN Number=Sing _ _ _ _ 48 cytometry cytometry NOUN NN Number=Sing _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 51 chain chain NOUN NN Number=Sing _ _ _ _ 52 reaction reaction NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 5764 # text = Gel-shift analysis in HUVECs demonstrated that PDTC prevented NF-kappa B mobilization by TNF, suggesting that only VCAM-1 induction was controlled by NF-kappa B. 1 Gel gel NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 HUVECs HUVEC PROPN NNP Number=Sing _ _ _ _ 7 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 PDTC PDTC PROPN NNP Number=Sing _ _ _ _ 10 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 mobilization mobilization NOUN NN Number=Sing _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 only only ADV RB _ _ _ _ _ 22 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 induction induction NOUN NN Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappa kappa NOUN NN Number=Sing _ _ _ _ 32 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 5765 # text = Since HUVECs released superoxide anions in response to TNF, and H2O2 induces VCAM-1, PDTC may act as a radical scavenger. 1 Since since SCONJ IN _ _ _ _ _ 2 HUVECs HUVEC PROPN NNP Number=Sing _ _ _ _ 3 released release VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 superoxide superoxide ADJ JJ Degree=Pos _ _ _ _ 5 anions anion NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 response response NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 H2O2 H2O2 NUM CD NumType=Card _ _ _ _ 13 induces induce NOUN NNS Number=Plur _ _ _ _ 14 VCAM VCAm NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - SYM SYM _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 PDTC PDTC PROPN NNP Number=Sing _ _ _ _ 19 may may AUX MD VerbForm=Fin _ _ _ _ 20 act act VERB VB VerbForm=Inf _ _ _ _ 21 as as ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 radical radical ADJ JJ Degree=Pos _ _ _ _ 24 scavenger scavenger NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5766 # text = Although ICAM-1 induction was unaffected, inhibitors of NADPH oxidase (apocynin) or cytochrome P-450 (SKF525a) suppressed VCAM-1 induction by TNF, revealing that several radical-generating systems are involved in its regulation. 1 Although although SCONJ IN _ _ _ _ _ 2 ICAM ICAm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 induction induction NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 unaffected unaffected ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NADPH NADPH DET DT _ _ _ _ _ 12 oxidase oxidase NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 apocynin apocynin NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 cytochrome cytochrome NOUN NN Number=Sing _ _ _ _ 18 P- P- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 450 450 NUM CD NumType=Card _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 SKF SKF NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 525 525 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 a a DET DT Definite=Ind|PronType=Art _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 VCAM VCAM NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 induction induction NOUN NN Number=Sing _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 revealing reveal VERB VBG VerbForm=Ger _ _ _ _ 34 that that SCONJ IN _ _ _ _ _ 35 several several ADJ JJ Degree=Pos _ _ _ _ 36 radical radical ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 generating generating NOUN NN Number=Sing _ _ _ _ 39 systems system NOUN NNS Number=Plur _ _ _ _ 40 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 41 involved involved ADJ JJ Degree=Pos _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 44 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 5767 # text = PDTC, apocynin, or SKF525a decreased adhesion of monocytic U937 cells to TNF-treated HUVECs (by 75% at 100 mumol/L PDTC). 1 PDTC Pdtc NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 apocynin apocynin NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 or or CCONJ CC _ _ _ _ _ 6 SKF SKF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 52 52 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 14 U937 U937 NUM CD NumType=Card _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 by by ADP IN _ _ _ _ _ 23 75 75 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 % % SYM NN Number=Sing _ _ _ _ 25 at at ADP IN _ _ _ _ _ 26 100 100 NUM CD NumType=Card _ _ _ _ 27 mumol mumol NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 /L /L PROPN NNP Number=Sing _ _ _ _ 29 PDTC PDTC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 5768 # text = Inhibition by anti-VCAM-1 monoclonal antibody 1G11 indicated that U937 adhesion was VCAM-1 dependent and suppression by antioxidants was due to reduced VCAM-1 induction. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 by by ADP IN _ _ _ _ _ 3 anti-VCAM anti-vcam NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 7 antibody antibody ADJ JJ Degree=Pos _ _ _ _ 8 1G11 1G11 PROPN NNP Number=Sing _ _ _ _ 9 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 U937 U937 NUM CD NumType=Card _ _ _ _ 12 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 VCAM Vcam NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 dependent dependent NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 suppression suppression NOUN NN Number=Sing _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 due due ADP IN _ _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5769 # text = (ABSTRACT TRUNCATED AT 250 WORDS) 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 ABSTRACT ABSTRACT X GW _ _ _ _ _ 3 TRUNCATED Truncate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 AT at ADV RB _ _ _ _ _ 5 250 250 NUM CD NumType=Card _ _ _ _ 6 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5770 # text = Document 003001450 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001450 003001450 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5771 # text = Reduction of tumour necrosis factor alpha expression and signalling in peripheral blood mononuclear cells from patients with thalassaemia or sickle cell anaemia upon treatment with desferrioxamine. 1 Reduction reduction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 tumour tumour NOUN NN Number=Sing _ _ _ _ 4 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 signalling signalling VERB VBG VerbForm=Ger _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 12 blood blood NOUN NN Number=Sing _ _ _ _ 13 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 patients patient NOUN NNS Number=Plur _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 thalassaemia thalassaemia NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 sickle sickle NOUN NN Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 anaemia anaemia NOUN NN Number=Sing _ _ _ _ 23 upon upon ADP IN _ _ _ _ _ 24 treatment treatment NOUN NN Number=Sing _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 desferrioxamine desferrioxamine NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5772 # text = Recent evidence indicates that the rate of progression of the HIV-1 disease is significantly reduced in thalassaemia major patients upon treatment with high doses of desferrioxamine (DFX). 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 evidence evidence NOUN NN Number=Sing _ _ _ _ 3 indicates indicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 rate rate NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 progression progression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 disease disease NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 significantly significantly ADV RB _ _ _ _ _ 17 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 thalassaemia thalassaemia NOUN NN Number=Sing _ _ _ _ 20 major major ADJ JJ Degree=Pos _ _ _ _ 21 patients patient NOUN NNS Number=Plur _ _ _ _ 22 upon upon ADP IN _ _ _ _ _ 23 treatment treatment NOUN NN Number=Sing _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 high high ADJ JJ Degree=Pos _ _ _ _ 26 doses dos NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 desferrioxamine desferrioxamine NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 DFX DFX NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 5773 # text = The authors have previously demonstrated that in vitro exposure of mononuclear cells to DFX decreases the bioavailability of tumour necrosis factor alpha (TNF-alpha) which has a stimulatory effect on HIV-1 replication. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 authors author NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 previously previously ADV RB _ _ _ _ _ 5 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 9 exposure exposure NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 DFX DFX PROPN NNP Number=Sing _ _ _ _ 15 decreases decrease VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 bioavailability bioavailability NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 tumour tumour NOUN NN Number=Sing _ _ _ _ 20 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 alpha alpha NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 which which PRON WDT PronType=Rel _ _ _ _ 29 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 stimulatory stimulatory ADJ JJ Degree=Pos _ _ _ _ 32 effect effect NOUN NN Number=Sing _ _ _ _ 33 on on ADP IN _ _ _ _ _ 34 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ _ 37 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 5774 # text = In this study, therefore, TNF-alpha bioavailability from mononuclear cells isolated from 10 patients with thalassaemia or sickle cell anaemia given DFX as compared to 10 untreated subjects has been evaluated. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 therefore therefore ADV RB _ _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 alpha alpha NOUN NN Number=Sing _ _ _ _ 10 bioavailability bioavailability NOUN NN Number=Sing _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 10 10 NUM CD NumType=Card _ _ _ _ 17 patients patient NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 thalassaemia thalassaemia NOUN NN Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 sickle sickle ADJ JJ Degree=Pos _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 anaemia anaemia ADP IN _ _ _ _ _ 24 given give VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 DFX Dfx NOUN NN Number=Sing _ _ _ _ 26 as as SCONJ IN _ _ _ _ _ 27 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 10 10 NUM CD NumType=Card _ _ _ _ 30 untreated untreated ADJ JJ Degree=Pos _ _ _ _ 31 subjects subject NOUN NNS Number=Plur _ _ _ _ 32 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 34 evaluated evaluate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 5775 # text = Evidence is presented showing that DFX treatment reduces TNF-alpha bioavailability (P<0.05) by inhibiting its steady state (P<0.05) and by enhancing its inactivation through binding to soluble TNF-alpha receptor type II (P<0.05). 1 Evidence evidence NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 presented present VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 showing show VERB VBG VerbForm=Ger _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 DFX DFX PROPN NNP Number=Sing _ _ _ _ 7 treatment treatment NOUN NN Number=Sing _ _ _ _ 8 reduces reduce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 bioavailability bioavailability NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 P p NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 < < PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 0.05 0.05 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 by by SCONJ IN _ _ _ _ _ 19 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 20 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 steady steady ADJ JJ Degree=Pos _ _ _ _ 22 state state NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 P p NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 < < PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 0.05 0.05 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 by by SCONJ IN _ _ _ _ _ 30 enhancing enhance VERB VBG VerbForm=Ger _ _ _ _ 31 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 32 inactivation inactivation NOUN NN Number=Sing _ _ _ _ 33 through through SCONJ IN _ _ _ _ _ 34 binding bind VERB VBG VerbForm=Ger _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 soluble soluble VERB VB VerbForm=Inf _ _ _ _ 37 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 alpha alpha NOUN NN Number=Sing _ _ _ _ 40 receptor receptor NOUN NN Number=Sing _ _ _ _ 41 type type NOUN NN Number=Sing _ _ _ _ 42 II ii NUM CD NumType=Card _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 P p NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 < < PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 0.05 0.05 NUM CD NumType=Card _ _ _ SpaceAfter=No 47 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 5776 # text = We also show that DFX treatment limits the in vivo activation of NF-kappaB, a transcription factor involved in both TNF-alpha gene transcription and TNF-alpha signalling (P<0.005). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 DFX DFX PROPN NNP Number=Sing _ _ _ _ 6 treatment treatment NOUN NN Number=Sing _ _ _ _ 7 limits limit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 vivo vivo NOUN NN Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 involved involved ADJ JJ Degree=Pos _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 both both DET DT _ _ _ _ _ 23 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 alpha alpha NOUN NN Number=Sing _ _ _ _ 26 gene gene NOUN NN Number=Sing _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 alpha alpha NOUN NN Number=Sing _ _ _ _ 32 signalling signalling NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 P p NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 < < PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 0.005 0.005 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 5777 # text = We conclude that TNF-alpha bioavailability and signalling are impaired in patients upon DFX treatment. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 bioavailability bioavailability NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 signalling signalling NOUN NN Number=Sing _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 impaired impaire VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 patients patient NOUN NNS Number=Plur _ _ _ _ 14 upon upon ADP IN _ _ _ _ _ 15 DFX Dfx ADJ JJ Degree=Pos _ _ _ _ 16 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 5778 # text = This mechanism may contribute to delayed progression of the HIV-1 infection in vivo. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 3 may may AUX MD VerbForm=Fin _ _ _ _ 4 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 delayed delayed VERB VB VerbForm=Inf _ _ _ _ 7 progression progression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 infection infection NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 vivo. vivo. NOUN NN Number=Sing _ _ _ _ # sent_id = 5779 # text = Copyright 1999 Academic Press. 1 Copyright copyright NOUN NN Number=Sing _ _ _ _ 2 1999 1999 NUM CD NumType=Card _ _ _ _ 3 Academic academic PROPN NNP Number=Sing _ _ _ _ 4 Press. Press. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5780 # text = Document 003001463 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001463 003001463 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5781 # text = Heterodimerization and transcriptional activation in vitro by NF-kappa B proteins. 1 Heterodimerization Heterodimerization NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 vitro vitro PROPN NNP Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5782 # text = The NF-kappa B family of transcription proteins represents multiple DNA binding, rel related polypeptides that contribute to regulation of genes involved in immune responsiveness and inflammation, as well as activation of the HIV long terminal repeat. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 family family NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 represents represent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 rel rel VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 16 related related ADJ JJ Degree=Pos _ _ _ _ 17 polypeptides polypeptide NOUN NNS Number=Plur _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 contribute contribute VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 regulation regulation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 genes gene NOUN NNS Number=Plur _ _ _ _ 24 involved involved ADJ JJ Degree=Pos _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 immune immune ADJ JJ Degree=Pos _ _ _ _ 27 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 as as ADV RB _ _ _ _ _ 32 well well ADV RB Degree=Pos _ _ _ _ 33 as as ADP IN _ _ _ _ _ 34 activation activation NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 HIV HIV PROPN NNP Number=Sing _ _ _ _ 38 long long ADJ JJ Degree=Pos _ _ _ _ 39 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 40 repeat repeat NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 5783 # text = In this study multiple NF-kappa B related polypeptides ranging from 85 to 45 kDa were examined for their capacity to interact with the PRDII regulatory element of interferon beta and were shown to possess distinct intrinsic DNA binding affinities for this NF-kappa B site and form multiple DNA binding homo- and heterodimer complexes in co-renaturation experiments. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B b PROPN NNP Number=Sing _ _ _ _ 9 related relate ADJ JJ Degree=Pos _ _ _ _ 10 polypeptides polypeptides NOUN NNS Number=Plur _ _ _ _ 11 ranging range VERB VBG VerbForm=Ger _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 85 85 NUM CD NumType=Card _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 45 45 NUM CD NumType=Card _ _ _ _ 16 kDa kDa PROPN NNP Number=Sing _ _ _ _ 17 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 capacity capacity NOUN NN Number=Sing _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 interact interact VERB VB VerbForm=Inf _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 PRDII pRDIi X AFX _ _ _ _ _ 27 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 28 element element NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 interferon interferon NOUN NN Number=Sing _ _ _ _ 31 beta beta NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 possess possess VERB VB VerbForm=Inf _ _ _ _ 37 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 38 intrinsic intrinsic ADJ JJ Degree=Pos _ _ _ _ 39 DNA dna NOUN NN Number=Sing _ _ _ _ 40 binding bind VERB VBG VerbForm=Ger _ _ _ _ 41 affinities affinity NOUN NNS Number=Plur _ _ _ _ 42 for for ADP IN _ _ _ _ _ 43 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 44 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 kappa kappa NOUN NN Number=Sing _ _ _ _ 47 B b NOUN NN Number=Sing _ _ _ _ 48 site site NOUN NN Number=Sing _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 form form ADJ JJ Degree=Pos _ _ _ _ 51 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 52 DNA dna NOUN NN Number=Sing _ _ _ _ 53 binding binding VERB VBG VerbForm=Ger _ _ _ _ 54 homo homo ADV RB _ _ _ _ SpaceAfter=No 55 - - PUNCT , _ _ _ _ _ 56 and and CCONJ CC _ _ _ _ _ 57 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 58 complexes complex NOUN NNS Number=Plur _ _ _ _ 59 in in ADP IN _ _ _ _ _ 60 co-renaturation co-renaturation NOUN NN Number=Sing _ _ _ _ 61 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 62 . . PUNCT . _ _ _ _ _ # sent_id = 5784 # text = Furthermore, using DNA templates containing two copies of the PRDII domain linked to the rabbit beta globin gene, the purified polypeptides specifically stimulated NF-kappa B dependent transcription in an in vitro reconstitution assay as heterodimers but not as p50 homodimers. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 using use VERB VBG VerbForm=Ger _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ _ 5 templates template NOUN NNS Number=Plur _ _ _ _ 6 containing contain VERB VBG VerbForm=Ger _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 copies copy NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 PRDII PRDII PROPN NNP Number=Sing _ _ _ _ 12 domain domain NOUN NN Number=Sing _ _ _ _ 13 linked link VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 rabbit rabbit NOUN NN Number=Sing _ _ _ _ 17 beta beta NOUN NN Number=Sing _ _ _ _ 18 globin globin ADP IN _ _ _ _ _ 19 gene gene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 polypeptides polypeptide NOUN NNS Number=Plur _ _ _ _ 24 specifically specifically ADV RB _ _ _ _ _ 25 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa PROPN NNP Number=Sing _ _ _ _ 29 B b PROPN NNP Number=Sing _ _ _ _ 30 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 36 reconstitution reconstitution NOUN NN Number=Sing _ _ _ _ 37 assay assay NOUN NN Number=Sing _ _ _ _ 38 as as ADP IN _ _ _ _ _ 39 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 40 but but CCONJ CC _ _ _ _ _ 41 not not ADV RB _ _ _ _ _ 42 as as ADV RB _ _ _ _ _ 43 p50 p50 NUM CD NumType=Card _ _ _ _ 44 homodimers homodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 5785 # text = These experiments emphasize the role of NF-kappa B dimerization as a distinct level of transcriptional control that may permit functional diversification of a limited number of regulatory proteins. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 experiments experiment NOUN NNS Number=Plur _ _ _ _ 3 emphasize emphasize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 dimerization dimerization NOUN NN Number=Sing _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 15 level level NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 control control NOUN NN Number=Sing _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 may may AUX MD VerbForm=Fin _ _ _ _ 21 permit permit VERB VB VerbForm=Inf _ _ _ _ 22 functional functional ADJ JJ Degree=Pos _ _ _ _ 23 diversification diversification NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 limited limited ADJ JJ Degree=Pos _ _ _ _ 27 number number NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 30 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5786 # text = Document 003001467 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001467 003001467 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5787 # text = A nuclear factor NF-GM2 that interacts with a regulatory region of the GM-CSF gene essential for its induction in responses to T-cell activation: purification from human T-cell leukemia line Jurkat cells and similarity to NF-kappa B. Activation of T cells by antigen, lectin, or a combination of phorbol-12-myristate acetate (PMA) and calcium ionophore (A23187) leads to the induction of genes for a set of lymphokines, including granulocyte-macrophage colony-stimulating factor (GM-CSF). 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 GM2 Gm2 NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 interacts interact VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 12 region region NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 CSF CSF PROPN NNP Number=Sing _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 essential essential ADJ JJ Degree=Pos _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 22 induction induction NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 responses response NOUN NNS Number=Plur _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 : : PUNCT : _ _ _ _ _ 30 purification purification NOUN NN Number=Sing _ _ _ _ 31 from from ADP IN _ _ _ _ _ 32 human human ADJ JJ Degree=Pos _ _ _ _ 33 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 36 line line NOUN NN Number=Sing _ _ _ _ 37 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 similarity similarity NOUN NN Number=Sing _ _ _ _ 41 to to ADP IN _ _ _ _ _ 42 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 kappa kappa PROPN NNP Number=Sing _ _ _ _ 45 B. B. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n 46 Activation Activation PROPN NNP Number=Sing _ _ _ _ 47 of of ADP IN _ _ _ _ _ 48 T t PROPN NNP Number=Sing _ _ _ _ 49 cells cell NOUN NNS Number=Plur _ _ _ _ 50 by by ADP IN _ _ _ _ _ 51 antigen antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 lectin lectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 , , PUNCT , _ _ _ _ _ 55 or or CCONJ CC _ _ _ _ _ 56 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 57 combination combination NOUN NN Number=Sing _ _ _ _ 58 of of ADP IN _ _ _ _ _ 59 phorbol phorbol NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 61 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 62 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 63 myristate myristate NOUN NN Number=Sing _ _ _ _ 64 acetate acetate NOUN NN Number=Sing _ _ _ _ 65 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 66 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 67 ) ) PUNCT -RRB- _ _ _ _ _ 68 and and CCONJ CC _ _ _ _ _ 69 calcium calcium NOUN NN Number=Sing _ _ _ _ 70 ionophore ionophore NOUN NN Number=Sing _ _ _ _ 71 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 72 A23187 A23187 NUM CD NumType=Card _ _ _ SpaceAfter=No 73 ) ) PUNCT -RRB- _ _ _ _ _ 74 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 75 to to ADP IN _ _ _ _ _ 76 the the DET DT Definite=Def|PronType=Art _ _ _ _ 77 induction induction NOUN NN Number=Sing _ _ _ _ 78 of of ADP IN _ _ _ _ _ 79 genes gene NOUN NNS Number=Plur _ _ _ _ 80 for for ADP IN _ _ _ _ _ 81 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 82 set set NOUN NN Number=Sing _ _ _ _ 83 of of ADP IN _ _ _ _ _ 84 lymphokines lymphokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 85 , , PUNCT , _ _ _ _ _ 86 including include VERB VBG VerbForm=Ger _ _ _ _ 87 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 88 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 89 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 90 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 91 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 92 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 93 factor factor NOUN NN Number=Sing _ _ _ _ 94 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 95 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 96 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 97 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 98 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 99 . . PUNCT . _ _ _ _ _ # sent_id = 5788 # text = We demonstrated in earlier studies that the upstream region of the mouse GM-CSF promoter at positions between -95 and -73 is essential for transcriptional activation in response to PMA/A23187. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 earlier earlier ADJ JJR Degree=Cmp _ _ _ _ 5 studies study NOUN NNS Number=Plur _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 9 region region NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 mouse mouse NOUN NN Number=Sing _ _ _ _ 13 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 CSF CSF PROPN NNP Number=Sing _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 at at ADP IN _ _ _ _ _ 18 positions position NOUN NNS Number=Plur _ _ _ _ 19 between between ADP IN _ _ _ _ _ 20 -95 -95 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 - - SYM SYM _ _ _ _ SpaceAfter=No 23 73 73 NUM CD NumType=Card _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 essential essential ADJ JJ Degree=Pos _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 response response NOUN NN Number=Sing _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 PMA/A PMA/A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 23187 23187 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 5789 # text = This region contains two DNA-binding motifs, GM2 and GC-box. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 region region NOUN NN Number=Sing _ _ _ _ 3 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 binding binding VERB VBG VerbForm=Ger _ _ _ _ 8 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 GM2 GM2 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 GC Gc NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 5790 # text = The GM2 sequence (GGTAGTTCCC) is recognized by an inducible factor NF-GM2; the other (CCGCCC) by constitutive factors A1, A2, and B. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 GM2 Gm2 NUM CD NumType=Card _ _ _ _ 3 sequence sequence NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 GGTAGTTCCC GGTAGTTCCC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 recognized recognize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 GM2 Gm2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ; ; PUNCT , _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 other other ADJ JJ Degree=Pos _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 CCGCCC CCGCCC X LS _ _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 24 factors factor NOUN NNS Number=Plur _ _ _ _ 25 A1 A1 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 A2 A2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 5791 # text = To elucidate the mechanism of GM-CSF gene activation, we have purified the inducible factor NF-GM2 from the nuclear extract of stimulated Jurkat cells on the basis of specific DNA-binding activity. 1 To to PART TO _ _ _ _ _ 2 elucidate elucidate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 CSF CSF PROPN NNP Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 13 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 GM2 Gm2 NOUN NN Number=Sing _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 24 extract extract NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 on on ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 basis basis NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 specific specific ADJ JJ Degree=Pos _ _ _ _ 34 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 binding binding VERB VBG VerbForm=Ger _ _ _ _ 37 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 5792 # text = The purified NF-GM2 consists of 50 (p50) and 65 kDa (p65) polypeptides and has a binding activity specific for both the GM-CSF and immunoglobulin kappa (GGAAAGTCCC) enhancers. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 GM2 Gm2 NOUN NN Number=Sing _ _ _ _ 6 consists consist NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 50 50 NUM CD NumType=Card _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 65 65 NUM CD NumType=Card _ _ _ _ 14 kDa kDa NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 polypeptides polypeptide NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 binding binding VERB VBG VerbForm=Ger _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 both both CCONJ CC _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 GM gm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 CSF Csf PROPN NNP Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 immunoglobulin immunoglobulin PROPN NNP Number=Sing _ _ _ _ 33 kappa kappa PROPN NNP Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 GGAAAGTCCC Ggaaagtccc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 enhancers enhancer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 5793 # text = Electrophoretically purified p50 alone can form a protein-DNA complex, but in the mixture, p50 associates preferentially with p65 to form the NF-GM2 complex. 1 Electrophoretically Electrophoretically ADV RB _ _ _ _ _ 2 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 p50 p50 NOUN NN Number=Sing _ _ _ _ 4 alone alone ADV RB _ _ _ _ _ 5 can can AUX MD VerbForm=Fin _ _ _ _ 6 form form VERB VB VerbForm=Inf _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 DNA dna NOUN NN Number=Sing _ _ _ _ 11 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 mixture mixture NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 p50 p50 NUM CD NumType=Card _ _ _ _ 19 associates associate NOUN NNS Number=Plur _ _ _ _ 20 preferentially preferentially ADV RB _ _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 p65 p65 NOUN NN Number=Sing _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 form form VERB VB VerbForm=Inf _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 GM2 Gm2 NOUN NN Number=Sing _ _ _ _ 29 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5794 # text = In addition, p65 gave per se, with low affinity, a protein-DNA complex that migrated more slowly than native NF-GM2 complex. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 p65 p65 NUM CD NumType=Card _ _ _ _ 5 gave give VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 per per ADP IN _ _ _ _ _ 7 se se NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 low low ADJ JJ Degree=Pos _ _ _ _ 11 affinity affinity NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 DNA dna NOUN NN Number=Sing _ _ _ _ 17 complex complex NOUN NN Number=Sing _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 migrated migrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 more more ADV RBR _ _ _ _ _ 21 slowly slowly ADV RB _ _ _ _ _ 22 than than ADP IN _ _ _ _ _ 23 native native ADJ JJ Degree=Pos _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 GM2 Gm2 NUM CD NumType=Card _ _ _ _ 27 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5795 # text = Furthermore, an antiserum against KBF1 (identical to 50 kDa NF-kappa B protein) reacted with the p50 of NF-GM2, indicating that the NF-GM2 polypeptide cannot be immunologically differentiated from the 50 kDa subunit of NF-kappa B. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 antiserum antiserum NOUN NN Number=Sing _ _ _ _ 5 against against ADP IN _ _ _ _ _ 6 KBF1 KBF1 PROPN NNP Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 identical identical ADJ JJ Degree=Pos _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 50 50 NUM CD NumType=Card _ _ _ _ 11 kDa kDa PROPN NNP Number=Sing _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 kappa kappa X FW Foreign=Yes _ _ _ _ 15 B b X GW _ _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 reacted react VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 p50 p50 NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 GM2 Gm2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 28 that that SCONJ IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 GM2 Gm2 NOUN NN Number=Sing _ _ _ _ 33 polypeptide polypeptide NOUN NN Number=Sing _ _ _ _ 34 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 35 not not PART RB _ _ _ _ _ 36 be be AUX VB VerbForm=Inf _ _ _ _ 37 immunologically immunologically ADV RB _ _ _ _ _ 38 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 from from ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 50 50 NUM CD NumType=Card _ _ _ _ 42 kDa kDa NOUN NN Number=Sing _ _ _ _ 43 subunit subunit NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 kappa kappa PROPN NNP Number=Sing _ _ _ _ 48 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 5796 # text = The purified NF-GM2 activated in vitro transcription from the kappa B enhancer, while it failed to stimulate transcription from the GM-CSF promoter harboring the GM2 sequence. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 GM2 Gm2 NOUN NN Number=Sing _ _ _ _ 6 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 vitro vitro NOUN NN Number=Sing _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 while while SCONJ IN _ _ _ _ _ 17 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 18 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 CSF CSF PROPN NNP Number=Sing _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ _ 28 harboring harbor VERB VBG VerbForm=Ger _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 GM2 Gm2 NOUN NN Number=Sing _ _ _ _ 31 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 5797 # text = This suggests that the activation mechanism of the GM-CSF gene through the GM2/GC-box sequence is different from that of genes carrying the kappa B enhancer alone. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 CSF CSF PROPN NNP Number=Sing _ _ _ _ 12 gene gene VERB VB VerbForm=Inf _ _ _ _ 13 through through ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 GM2/GC Gm2/gc NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 box box NOUN NN Number=Sing _ _ _ _ 18 sequence sequence NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 different different ADJ JJ Degree=Pos _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 genes gene NOUN NNS Number=Plur _ _ _ _ 25 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ _ 29 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 30 alone alone ADV RB _ _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5798 # text = Document 003001482 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001482 003001482 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5799 # text = Retinoic acid-induced modulation of IL-2 mRNA production and IL-2 receptor expression on T cells. 1 Retinoic Retinoic ADJ JJ Degree=Pos _ _ _ _ 2 acid acid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 -induced -induced VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 modulation modulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 10 production production NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 receptor receptor NOUN NN Number=Sing _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5800 # text = BACKGROUND: Retinoic acid (RA) has important immune-modulating effects on both T and B cell function. 1 BACKGROUND background ADP IN _ _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Retinoic Retinoic ADJ JJ Degree=Pos _ _ _ _ 4 acid acid NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 important important ADJ JJ Degree=Pos _ _ _ _ 10 immune immune ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 -modulating -modulating NOUN NN Number=Sing _ _ _ _ 12 effects effect NOUN NNS Number=Plur _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 both both CCONJ CC _ _ _ _ _ 15 T t NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 5801 # text = Our laboratory has shown that RA can enhance in vitro polyclonal B cell immunoglobulin 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 laboratory laboratory NOUN NN Number=Sing _ _ _ _ 3 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 RA RA PROPN NNP Number=Sing _ _ _ _ 7 can can AUX MD VerbForm=Fin _ _ _ _ 8 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 11 polyclonal polyclonal ADJ JJ Degree=Pos _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 immunoglobulin immunoglobulin NOUN NN Number=Sing _ _ _ _ # sent_id = 5802 # text = (Ig) response. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 Ig ig PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 . . PUNCT . _ _ _ _ _ # sent_id = 5803 # text = Investigating cytokines known to affect B cell differentiation, we have recently shown that IL-6 production is augmented by RA. 1 Investigating investigate VERB VBG VerbForm=Ger _ _ _ _ 2 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 3 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 affect affect NOUN NN Number=Sing _ _ _ _ 6 B b PROPN NNP Number=Sing _ _ _ _ 7 cell cell PROPN NNP Number=Sing _ _ _ _ 8 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 recently recently ADV RB _ _ _ _ _ 13 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 6 6 NUM CD NumType=Card _ _ _ _ 18 production production NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 augmented augment VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 5804 # text = In the present study we have examined the immune modulating effects of RA on IL-2 mRNA, another important cytokine for B cell immunoglobulin production, the expression of IL-2 receptors on T cells, and the RA nuclear receptors. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 immune immune ADJ JJ Degree=Pos _ _ _ _ 10 modulating modulating NOUN NN Number=Sing _ _ _ _ 11 effects effect NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 RA RA PROPN NNP Number=Sing _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 another another DET DT _ _ _ _ _ 21 important important ADJ JJ Degree=Pos _ _ _ _ 22 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 B b ADJ JJ Degree=Pos _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 immunoglobulin immunoglobulin ADP IN _ _ _ _ _ 27 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 2 2 NUM CD NumType=Card _ _ _ _ 35 receptors receptor NOUN NNS Number=Plur _ _ _ _ 36 on on ADP IN _ _ _ _ _ 37 T t PROPN NNP Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 RA RA PROPN NNP Number=Sing _ _ _ _ 43 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 44 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 5805 # text = METHODS: Purified T cells were obtained from adenoidal tissues, and incubated with RA (10(-7) M) or DMSO solvent/media control for 0, 6-8, and 24 h. 1 METHODS method NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Purified Purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 obtained obtain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 adenoidal adenoidal ADJ JJ Degree=Pos _ _ _ _ 10 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 incubated incubate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 RA RA PROPN NNP Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 (- (- PUNCT . _ _ _ _ SpaceAfter=No 19 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 DMSO Dmso PROPN NNP Number=Sing _ _ _ _ 25 solvent solvent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 27 media media NOUN NN Number=Sing _ _ _ _ 28 control control NOUN NN Number=Sing _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 0 0 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 - - SYM SYM _ _ _ _ SpaceAfter=No 34 8 8 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 24 24 NUM CD NumType=Card _ _ _ _ 38 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 5806 # text = Total mRNA was extracted from T cells, and using RT-PCR, changes in the production of IL-2 and RA receptors (RAR)-alpha,beta,gamma mRNA were determined. 1 Total total PROPN NNP Number=Sing _ _ _ _ 2 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 extracted extract VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 using use VERB VBG VerbForm=Ger _ _ _ _ 11 RT Rt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 PCR Pcr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 changes change NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 production production NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 RA Ra NOUN NN Number=Sing _ _ _ _ 25 receptors receptor NOUN NNS Number=Plur _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 RAR RAR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ SpaceAfter=No 32 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ SpaceAfter=No 34 gamma gamma PROPN NNP Number=Sing _ _ _ _ 35 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 36 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 37 determined determine ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 5807 # text = The effects of RA on IL-2-alpha receptor expression was determined by flow cytometry on T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 RA RA PROPN NNP Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 flow flow NOUN NN Number=Sing _ _ _ _ 17 cytometry cytometry NOUN NN Number=Sing _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5808 # text = CONCLUSION: 1 CONCLUSION conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 5809 # text = These studies suggest that RA can augment IL-2 mRNA production by T cells with a possible paracrine effect on IL-2R-alpha expression. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 RA RA PROPN NNP Number=Sing _ _ _ _ 6 can can AUX MD VerbForm=Fin _ _ _ _ 7 augment augment VERB VB VerbForm=Inf _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 12 production production NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 possible possible ADJ JJ Degree=Pos _ _ _ _ 19 paracrine paracrine NOUN NN Number=Sing _ _ _ _ 20 effect effect NOUN NN Number=Sing _ _ _ _ 21 on on ADP IN _ _ _ _ _ 22 IL- IL- NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 2R 2r NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 alpha alpha NOUN NN Number=Sing _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5810 # text = These changes appear to be mediated by RAR-alpha. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 changes change NOUN NNS Number=Plur _ _ _ _ 3 appear appear VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 RAR- rar- NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 5811 # text = Thus, IL-2 may be another important cytokine modulated by RA in the immune response. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 may may AUX MD VerbForm=Fin _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 another another DET DT _ _ _ _ _ 9 important important ADJ JJ Degree=Pos _ _ _ _ 10 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 11 modulated modulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 RA RA PROPN NNP Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 immune immune ADJ JJ Degree=Pos _ _ _ _ 17 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5812 # text = Document 003001483 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001483 003001483 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5813 # text = Interleukin-3 expression by activated T cells involves an inducible, T-cell-specific factor and an octamer binding protein. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 3 3 NUM CD NumType=Card _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 involves involves VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 inducible inducible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 T- T- SYM NFP _ _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 octamer octamer NOUN NN Number=Sing _ _ _ _ 21 binding binding VERB VBG VerbForm=Ger _ _ _ _ 22 protein. protein. NOUN NN Number=Sing _ _ _ SpacesAfter=\s\n # sent_id = 5814 # text = Interleukin-3 (IL-3) is exclusively expressed by activated T and natural killer cells, a function that is tightly controlled both in a lineage-specific and in a stimulation-dependent manner. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 3 3 NUM CD NumType=Card _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 3 3 X LS _ _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 exclusively exclusively ADV RB _ _ _ _ _ 11 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 natural natural ADJ JJ Degree=Pos _ _ _ _ 17 killer killer NOUN NN Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 function function NOUN NN Number=Sing _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 tightly tightly ADV RB _ _ _ _ _ 25 controlled controll VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 both both CCONJ CC _ _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 specific specific ADJ JJ Degree=Pos _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 38 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 5815 # text = We have investigated the protein binding characteristics and functional importance of the ACT-1-activating region of the IL-3 promoter. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 characteristics characteristic NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 functional functional ADJ JJ Degree=Pos _ _ _ _ 10 importance importance NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 ACT act NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 activating activat VERB VBG VerbForm=Ger _ _ _ _ 18 region region NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 3 3 NUM CD NumType=Card _ _ _ _ 24 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5816 # text = This region binds an inducible, T-cell-specific factor over its 5' end, a site that is necessary for the expression of IL-3 in the absence of other upstream elements. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 region region NOUN NN Number=Sing _ _ _ _ 3 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 inducible inducible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 T- T- SYM NFP _ _ _ _ SpaceAfter=No 8 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 specific specific ADJ JJ Degree=Pos _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 over over ADP IN _ _ _ _ _ 13 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ' ' PUNCT `` _ _ _ _ _ 16 end end NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 site site NOUN NN Number=Sing _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 3 3 NUM CD NumType=Card _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 absence absence NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 other other ADJ JJ Degree=Pos _ _ _ _ 35 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 36 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 5817 # text = Over its 3' end, it binds a factor that is ubiquitously and constitutively expressed. 1 Over over ADP IN _ _ _ _ _ 2 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 3 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 ' ' PUNCT `` _ _ _ _ _ 5 end end NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 8 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 ubiquitously ubiquitously ADV RB _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 constitutively constitutively ADV RB _ _ _ _ _ 16 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 5818 # text = This factor is Oct-1 or an immunologically related octamer-binding protein, and it plays a role in coordinating the activity of several regulatory elements. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 -1 -1 NUM CD NumType=Card _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 immunologically immunologically ADV RB _ _ _ _ _ 9 related related ADJ JJ Degree=Pos _ _ _ _ 10 octamer-binding octamer-binding ADJ JJ Degree=Pos _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 15 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 role role NOUN NN Number=Sing _ _ _ _ 18 in in SCONJ IN _ _ _ _ _ 19 coordinating coordinate VERB VBG VerbForm=Ger _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 several several ADJ JJ Degree=Pos _ _ _ _ 24 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 25 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5819 # text = These characteristics make the ACT-1 site analogous to the activating ARRE-1 site in the IL-2 promoter. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 characteristics characteristic NOUN NNS Number=Plur _ _ _ _ 3 make make VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 ACT act NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 site site NOUN NN Number=Sing _ _ _ _ 9 analogous analogous ADJ JJ Degree=Pos _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 activating activating VERB VBG VerbForm=Ger _ _ _ _ 13 ARRE Arre NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 site site NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 5820 # text = Furthermore, and despite a lack of sequence homology, the promoters of IL-3 and IL-2 share an organizational pattern of regulatory elements that is likely to be important for the T-cell-specific expression of these genes. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 despite despite ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 lack lack NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 sequence sequence NOUN NN Number=Sing _ _ _ _ 9 homology homology NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 promoters promoter NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 3 3 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 share share NOUN NN Number=Sing _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 organizational organizational ADJ JJ Degree=Pos _ _ _ _ 24 pattern pattern NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 27 elements element NOUN NNS Number=Plur _ _ _ _ 28 that that PRON WDT PronType=Rel _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 likely likely ADJ JJ Degree=Pos _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 be be AUX VB VerbForm=Inf _ _ _ _ 33 important important ADJ JJ Degree=Pos _ _ _ _ 34 for for ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 specific specific ADJ JJ Degree=Pos _ _ _ _ 40 expression expression NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 43 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5821 # text = Document 003001485 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001485 003001485 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5822 # text = IL-1 receptor and TCR signals synergize to activate NF-kappa B-mediated gene transcription. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 TCR Tcr NOUN NN Number=Sing _ _ _ _ 7 signals signal NOUN NNS Number=Plur _ _ _ _ 8 synergize synergize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 activate activate VERB VB VerbForm=Inf _ _ _ _ 11 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5823 # text = Previous studies have demonstrated that IL-1 receptor (IL-1R)- and TCR-initiated signals can interact synergistically to increase the rate of transcription of several lymphokine and lymphokine receptor genes during the competence phase of the activation program in T helper lymphocytes. 1 Previous previous ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 IL-1R Il-1r NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 TCR Tcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 initiated initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 signals signal NOUN NNS Number=Plur _ _ _ _ 19 can can AUX MD VerbForm=Fin _ _ _ _ 20 interact interact VERB VB VerbForm=Inf _ _ _ _ 21 synergistically synergistically ADV RB _ _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 increase increase VERB VB VerbForm=Inf _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 rate rate NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 several several ADJ JJ Degree=Pos _ _ _ _ 30 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 33 receptor receptor NOUN NN Number=Sing _ _ _ _ 34 genes gene NOUN NNS Number=Plur _ _ _ _ 35 during during ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 competence competence NOUN NN Number=Sing _ _ _ _ 38 phase phase NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 activation activation NOUN NN Number=Sing _ _ _ _ 42 program program NOUN NN Number=Sing _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 T t PROPN NNP Number=Sing _ _ _ _ 45 helper helper NOUN NN Number=Sing _ _ _ _ 46 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 5824 # text = In this report we describe how signals initiated through the type I IL-1R interact with signals from the antigen receptor to synergistically augment the transactivating properties of NF-kappa B. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 describe describe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 how how ADV WRB PronType=Int _ _ _ _ 7 signals signal NOUN NNS Number=Plur _ _ _ _ 8 initiated initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 through through ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 type type NOUN NN Number=Sing _ _ _ _ 12 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 13 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1R 1r PROPN NNP Number=Sing _ _ _ _ 16 interact interact NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 signals signal NOUN NNS Number=Plur _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 22 receptor receptor NOUN NN Number=Sing _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 synergistically synergistically ADV RB _ _ _ _ _ 25 augment augment VERB VB VerbForm=Inf _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 transactivating transactivat VERB VBG VerbForm=Ger _ _ _ _ 28 properties property NOUN NNS Number=Plur _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappa kappa PROPN NNP Number=Sing _ _ _ _ 33 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 5825 # text = The synergistic antigen receptor initiated signals are mediated through protein kinase C because they can be mimicked by the phorbol ester, 12-O-tetradecanoylphorbol-13-acetate, but not with calcium ionophores; and are staurosporine sensitive but cyclosporine resistant. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 3 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ _ 5 initiated initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 signals signal NOUN NNS Number=Plur _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 through through ADP IN _ _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 C care NOUN NN Number=Sing _ _ _ _ 13 because because SCONJ IN _ _ _ _ _ 14 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 15 can can AUX MD VerbForm=Fin _ _ _ _ 16 be be AUX VB VerbForm=Inf _ _ _ _ 17 mimicked mimick VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 21 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 12-O-tetradecanoylphorbol 12-O-tetradecanoylphorbol INTJ UH _ _ _ _ SpaceAfter=No 24 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 -acetate -acetate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 but but CCONJ CC _ _ _ _ _ 28 not not ADV RB _ _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 calcium calcium NOUN NN Number=Sing _ _ _ _ 31 ionophores ionophore NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 ; ; PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 staurosporine staurosporine VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 36 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 37 but but CCONJ CC _ _ _ _ _ 38 cyclosporine cyclosporine ADJ JJ Degree=Pos _ _ _ _ 39 resistant resistant NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 5826 # text = Gel shift analyses demonstrate that NF-kappa B nuclear translocation is stimulated primarily by IL-1 rather than by antigen receptor signals. 1 Gel gel NOUN NN Number=Sing _ _ _ _ 2 shift shift NOUN NN Number=Sing _ _ _ _ 3 analyses analysis NOUN NNS Number=Plur _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B b PROPN NNP Number=Sing _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 translocation translocation NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 primarily primarily ADV RB _ _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 rather rather ADV RB _ _ _ _ _ 20 than than ADP IN _ _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 antigen antigen VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 receptor receptor NOUN NN Number=Sing _ _ _ _ 24 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5827 # text = Western blot and phosphorylation analyses demonstrate that the synergistic effect on NF-kappa B functional activity is independent of I kappa B alpha (MAD3)-NF-kappa B dissociation in the cytosol and is not associated with I kappa B nuclear translocation. 1 Western western ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 5 analyses analysis NOUN NNS Number=Plur _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 10 effect effect NOUN NN Number=Sing _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa PROPN NNP Number=Sing _ _ _ _ 15 B b PROPN NNP Number=Sing _ _ _ _ 16 functional functional ADJ JJ Degree=Pos _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 independent independent ADJ JJ Degree=Pos _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 22 kappa kappa PROPN NNP Number=Sing _ _ _ _ 23 B benefit PROPN NNP Number=Sing _ _ _ _ 24 alpha alpha NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 MAD3 MAD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappa kappa NOUN NN Number=Sing _ _ _ _ 32 B b NOUN NN Number=Sing _ _ _ _ 33 dissociation dissociation NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 not not PART RB _ _ _ _ _ 40 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 41 with with ADP IN _ _ _ _ _ 42 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 43 kappa kappa PROPN NNP Number=Sing _ _ _ _ 44 B benefit PROPN NNP Number=Sing _ _ _ _ 45 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 46 translocation translocation NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 5828 # text = The IL-1-induced NF-kappa B DNA nuclear localization is transient and can be prolonged either by an antigen receptor-initiated signal or by inhibiting protein synthesis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B b PROPN NNP Number=Sing _ _ _ _ 11 DNA dna PROPN NNP Number=Sing _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 localization localization NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 transient transient ADJ JJ Degree=Pos _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 can can AUX MD VerbForm=Fin _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 prolonged prolonge VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 either either CCONJ CC _ _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 24 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 -initiated -initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 signal signal NOUN NN Number=Sing _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 by by SCONJ IN _ _ _ _ _ 29 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 30 protein protein NOUN NN Number=Sing _ _ _ _ 31 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 5829 # text = These results suggest that IL-1 induces both NF-kappa B nuclear translocation and the synthesis of a protein(s) responsible for terminating NF-kappa B-DNA interaction in the nucleus. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 induces induce NOUN NNS Number=Plur _ _ _ _ 9 both both CCONJ CC _ _ _ _ _ 10 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 translocation translocation NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 s s X AFX _ _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 26 for for SCONJ IN _ _ _ _ _ 27 terminating terminating VERB VBG VerbForm=Ger _ _ _ _ 28 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappa kappa PROPN NNP Number=Sing _ _ _ _ 31 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 DNA dna NOUN NN Number=Sing _ _ _ _ 34 interaction interaction NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 5830 # text = Antigen receptor signals prolong NF-kappa B-DNA interaction, probably by functionally antagonizing the IL-1-induced synthesis of a protein(s) responsible for the transient NF-kappa B-DNA interaction and consequently synergistically enhance IL-1-induced NF-kappa B-dependent gene transcription. 1 Antigen Antigen ADJ JJ Degree=Pos _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ _ 3 signals signal NOUN NNS Number=Plur _ _ _ _ 4 prolong prolong VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 DNA dna NOUN NN Number=Sing _ _ _ _ 11 interaction interaction NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 probably probably ADV RB _ _ _ _ _ 14 by by SCONJ IN _ _ _ _ _ 15 functionally functionally ADV RB _ _ _ _ _ 16 antagonizing antagonize VERB VBG VerbForm=Ger _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 s s X AFX _ _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 transient transient ADJ JJ Degree=Pos _ _ _ _ 34 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 kappa kappa PROPN NNP Number=Sing _ _ _ _ 37 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 DNA dna NOUN NN Number=Sing _ _ _ _ 40 interaction interaction NOUN NN Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 consequently consequently ADV RB _ _ _ _ _ 43 synergistically synergistically ADV RB _ _ _ _ _ 44 enhance enhance NOUN NN Number=Sing _ _ _ _ 45 IL il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 kappa kappa PROPN NNP Number=Sing _ _ _ _ 53 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 56 gene gene NOUN NN Number=Sing _ _ _ _ 57 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5831 # text = Document 003001490 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001490 003001490 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5832 # text = The DNA binding domain of the A-MYB transcription factor is responsible for its B cell-specific activity and binds to a B cell 110-kDa nuclear protein. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ _ 3 binding binde VERB VBG VerbForm=Ger _ _ _ _ 4 domain domain NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 A a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 MYB Myb PROPN NNP Number=Sing _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 binds bind NOUN NNS Number=Plur _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 B b PROPN NNP Number=Sing _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 110 110 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 kDa kDa PROPN NNP Number=Sing _ _ _ _ 30 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 31 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5833 # text = Expression studies as well as the use of transgenic animals have demonstrated that the A-MYB transcription factor plays central and specific role in the regulation of mature B cell proliferation and/or differentiation. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 as as ADV RB _ _ _ _ _ 4 well well ADV RB Degree=Pos _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 use use NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 10 animals animal NOUN NNS Number=Plur _ _ _ _ 11 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 MYB Myb NOUN NN Number=Sing _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 central central ADJ JJ Degree=Pos _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 specific specific ADJ JJ Degree=Pos _ _ _ _ 24 role role NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 regulation regulation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 mature mature ADJ JJ Degree=Pos _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ _ 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ SpaceAfter=No 34 / / PUNCT , _ _ _ _ SpaceAfter=No 35 or or CCONJ CC _ _ _ _ _ 36 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 5834 # text = Furthermore, it is highly expressed in Burkitt's lymphoma cells and may participate in the pathogenesis of this disease. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 highly highly ADV RB _ _ _ _ _ 6 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 Burkitt Burkitt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 's 's PART POS _ _ _ _ _ 10 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 may may AUX MD VerbForm=Fin _ _ _ _ 14 participate participate VERB VB VerbForm=Inf _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 20 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5835 # text = We have therefore investigated the transcriptional activity of A-MYB and its regulation in several human lymphoid cell lines using co-transfection assays and show that A-MYB is transcriptionally active in all the B cell lines studied, but not in T cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 therefore therefore ADV RB _ _ _ _ _ 4 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 A A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 MYB MYB PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 regulation regulation NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 several several ADJ JJ Degree=Pos _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 lymphoid lymphoid NOUN NN Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 lines line NOUN NNS Number=Plur _ _ _ _ 21 using use VERB VBG VerbForm=Ger _ _ _ _ 22 co-transfection co-transfection NOUN NN Number=Sing _ _ _ _ 23 assays assay NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 A A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 MYB MYB PROPN NNP Number=Sing _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 transcriptionally transcriptionally ADV RB _ _ _ _ _ 32 active active ADJ JJ Degree=Pos _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 all all DET PDT _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 B b NOUN NN Number=Sing _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 lines line NOUN NNS Number=Plur _ _ _ _ 39 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 but but CCONJ CC _ _ _ _ _ 42 not not ADV RB _ _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 T t PROPN NNP Number=Sing _ _ _ _ 45 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 5836 # text = In particular the best responder cell line was the Burkitt's cell line Namalwa. 1 In in ADP IN _ _ _ _ _ 2 particular particular ADJ JJ Degree=Pos _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 best best ADJ JJS Degree=Sup _ _ _ _ 5 responder responder NOUN NN Number=Sing _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 line line NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 Burkitt Burkitt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 's 's PART POS _ _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 line line NOUN NN Number=Sing _ _ _ _ 14 Namalwa Namalwa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 5837 # text = The activity of A-MYB in B and not T cells was observed when either an artificial construct or the c-MYC promoter was used as a reporter. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activity activity NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 A A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 MYB MYB PROPN NNP Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 B B PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 when when ADV WRB PronType=Int _ _ _ _ 16 either either CCONJ CC _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 artificial artificial ADJ JJ Degree=Pos _ _ _ _ 19 construct construct NOUN NN Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 MYC Myc NOUN NN Number=Sing _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 as as ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 reporter reporter NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 5838 # text = Furthermore, the functional domains responsible for DNA binding, transactivation, and negative regulation, previously characterized in a fibroblast context, were found to have similar activity in B cells. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 functional functional ADJ JJ Degree=Pos _ _ _ _ 5 domains domains NOUN NNS Number=Plur _ _ _ _ 6 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 DNA dna NOUN NN Number=Sing _ _ _ _ 9 binding binding NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 transactivation transactivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 negative negative ADJ JJ Degree=Pos _ _ _ _ 15 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 previously previously ADV RB _ _ _ _ _ 18 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 fibroblast fibroblast ADJ JJ Degree=Pos _ _ _ _ 22 context context NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 have have VERB VB VerbForm=Inf _ _ _ _ 28 similar similar ADJ JJ Degree=Pos _ _ _ _ 29 activity activity NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 B b ADJ JJ Degree=Pos _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 5839 # text = The region of A-MYB responsible for the B cell specific activity was defined to be the N-terminal 218 amino acids containing the DNA binding domain. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 region region NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 A A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 MYB MYB PROPN NNP Number=Sing _ _ _ _ 7 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 B b ADJ JJ Degree=Pos _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 terminal terminal NOUN NN Number=Sing _ _ _ _ 21 218 218 NUM CD NumType=Card _ _ _ _ 22 amino amino NOUN NN Number=Sing _ _ _ _ 23 acids acid SCONJ IN _ _ _ _ _ 24 containing contain VERB VBG VerbForm=Ger _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 DNA dna NOUN NN Number=Sing _ _ _ _ 27 binding binde VERB VBG VerbForm=Ger _ _ _ _ 28 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5840 # text = Finally, a 110-kDa protein has been identified in the nuclei of all the B, but not T, cell lines that specifically binds to this A-MYB N-terminal domain. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 110 110 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kDa kDa NOUN NN Number=Sing _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 10 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 all all DET PDT _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 not not ADV RB _ _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 lines line NOUN NNS Number=Plur _ _ _ _ 25 that that PRON WDT PronType=Rel _ _ _ _ 26 specifically specifically ADV RB _ _ _ _ _ 27 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 30 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 MYB Myb NOUN NN Number=Sing _ _ _ _ 33 N- N- PUNCT : _ _ _ _ SpaceAfter=No 34 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 35 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 5841 # text = We hypothesize that this 110-kDa protein may be a functionally important B cell-specific co-activator of A-MYB. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 hypothesize hypothesize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 110 110 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kDa kDa NOUN NN Number=Sing _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 may may AUX MD VerbForm=Fin _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 functionally functionally ADV RB _ _ _ _ _ 13 important important ADJ JJ Degree=Pos _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 co-activator co-activator NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 A A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 MYB MYB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5842 # text = Document 003001494 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001494 003001494 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5843 # text = The normal cell cycle activation program is exploited during the infection of quiescent B lymphocytes by Epstein-Barr virus. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 normal normal ADJ JJ Degree=Pos _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 cycle cycle NOUN NN Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 program program NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 exploited exploit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 during during ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 infection infection NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 quiescent quiescent ADJ JJ Degree=Pos _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 Barr Barr PROPN NNP Number=Sing _ _ _ _ 20 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5844 # text = B lymphocytes in the peripheral circulation are maintained in a non-proliferative state. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 6 circulation circulation NOUN NN Number=Sing _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 maintained maintain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 non-proliferative non-proliferative ADJ JJ Degree=Pos _ _ _ _ 12 state state NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 5845 # text = Antigen recognition stimulates limited proliferation, whereas infection with Epstein-Barr virus (EBV) results in continual proliferation and the outgrowth of immortal cell lines. 1 Antigen Antigen ADJ JJ Degree=Pos _ _ _ _ 2 recognition recognition NOUN NN Number=Sing _ _ _ _ 3 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 limited limited ADJ JJ Degree=Pos _ _ _ _ 5 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 whereas whereas SCONJ IN _ _ _ _ _ 8 infection infection NOUN NN Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 Barr Barr PROPN NNP Number=Sing _ _ _ _ 13 virus virus NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 results result NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 continual continual ADJ JJ Degree=Pos _ _ _ _ 20 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 outgrowth outgrowth NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 immortal immortal ADJ JJ Degree=Pos _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5846 # text = Because it is not clear at which point in cell cycle the peripheral B lymphocytes are arrested, we characterized the expression of several cell cycle-associated genes in quiescent and stimulated cells. 1 Because because SCONJ IN _ _ _ _ _ 2 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 clear clear ADJ JJ Degree=Pos _ _ _ _ 6 at at ADP IN _ _ _ _ _ 7 which which DET WDT PronType=Int _ _ _ _ 8 point point NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 cycle cycle NOUN NN Number=Sing _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 arrested arrest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 20 characterized characterize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 several several ADJ JJ Degree=Pos _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 genes gene NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 quiescent quiescent ADJ JJ Degree=Pos _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 5847 # text = We show that the expression of four cell genes, cdc-2, cyclin E, CD23, and cyclin D2, are up-regulated approximately 100-fold as a result of EBV-mediated immortalization. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 four four NUM CD NumType=Card _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 cdc cdc NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 cyclin cyclin NOUN NN Number=Sing _ _ _ _ 16 E e NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 CD23 CD23 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 cyclin cyclin NOUN NN Number=Sing _ _ _ _ 22 D2 d2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 up up ADV RB _ _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 approximately approximately ADV RB _ _ _ _ _ 29 100 100 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 fold fold NOUN NN Number=Sing _ _ _ _ 32 as as ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 result result NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 immortalization immortalization NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 5848 # text = Because these genes play a positive role in cell proliferation, we suggest that this regulatory switch contributes to controlling entry into the cell cycle. 1 Because because SCONJ IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 genes gene NOUN NNS Number=Plur _ _ _ _ 4 play play VERB VB VerbForm=Inf _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 positive positive ADJ JJ Degree=Pos _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 13 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 16 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 17 switch switch NOUN NN Number=Sing _ _ _ _ 18 contributes contribute VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 controlling controlle VERB VB VerbForm=Inf _ _ _ _ 21 entry entry NOUN NN Number=Sing _ _ _ _ 22 into into ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5849 # text = Transient stimulation of quiescent B lymphocytes with either a cocktail of anti-CD40, anti-IgM, and IL4, or EBV results in the rapid expression of the same four genes, suggesting that, after infection, EBV exploits the normal program of B-lymphocyte cell cycle activation. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 quiescent quiescent ADJ JJ Degree=Pos _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 either either CCONJ CC _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 cocktail cocktail NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 anti-CD40 anti-CD40 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 anti-IgM anti-Igm INTJ UH _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 IL4 IL4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 EBV EBV PROPN NNP Number=Sing _ _ _ _ 21 results result NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 same same ADJ JJ Degree=Pos _ _ _ _ 29 four four NUM CD NumType=Card _ _ _ _ 30 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 33 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 after after ADP IN _ _ _ _ _ 36 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 EBV EBV PROPN NNP Number=Sing _ _ _ _ 39 exploits exploit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 normal normal ADJ JJ Degree=Pos _ _ _ _ 42 program program NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 47 cell cell NOUN NN Number=Sing _ _ _ _ 48 cycle cycle NOUN NN Number=Sing _ _ _ _ 49 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5850 # text = Document 003001496 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001496 003001496 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5851 # text = Anti-Ehrlichia chaffeensis antibody complexed with E. 1 Anti-Ehrlichia Anti-Ehrlichia PROPN NNP Number=Sing _ _ _ _ 2 chaffeensis chaffeensis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 antibody antibody PRON NN Number=Sing _ _ _ _ 4 complexed complex VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 E. E. PROPN NNP Number=Sing _ _ _ _ # sent_id = 5852 # text = chaffeensis induces potent proinflammatory cytokine mRNA expression in human monocytes through sustained reduction of IkappaB-alpha and activation of NF-kappaB. 1 chaffeensis chaffeensis NOUN NN Number=Sing _ _ _ _ 2 induces induce NOUN NNS Number=Plur _ _ _ _ 3 potent potent ADJ JJ Degree=Pos _ _ _ _ 4 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 5 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 6 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 11 through through ADP IN _ _ _ _ _ 12 sustained sustain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 reduction reduction NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 alpha alpha NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5853 # text = Ehrlichia chaffeensis is an obligatory intracellular bacterium that infects monocytes and macrophages and is the etiologic agent of human ehrlichiosis in the United States. 1 Ehrlichia Ehrlichia PROPN NNP Number=Sing _ _ _ _ 2 chaffeensis chaffeensis PROPN NNP Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 obligatory obligatory ADJ JJ Degree=Pos _ _ _ _ 6 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 7 bacterium bacterium NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 infects infect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 etiologic etiologic ADJ JJ Degree=Pos _ _ _ _ 17 agent agent NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 ehrlichiosis ehrlichiosis NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 United United PROPN NNP Number=Sing _ _ _ _ 24 States States PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5854 # text = Our previous studies showed that the exposure of human monocytes to E. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 previous previous ADJ JJ Degree=Pos _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 exposure exposure NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 E. E. PROPN NNP Number=Sing _ _ _ _ # sent_id = 5855 # text = chaffeensis induces the expression of interleukin-1beta (IL-1beta), IL-8, and IL-10 genes in vitro but not the expression of tumor necrosis factor alpha (TNF-alpha) and IL-6 mRNAs. 1 chaffeensis chaffeensis PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 interleukin interleukin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 beta beta NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 10 10 NUM CD NumType=Card _ _ _ _ 24 genes gene NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 vitro vitro NOUN NN Number=Sing _ _ _ _ 27 but but CCONJ CC _ _ _ _ _ 28 not not PART RB _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 tumor tumor NOUN NN Number=Sing _ _ _ _ 33 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 34 factor factor NOUN NN Number=Sing _ _ _ _ 35 alpha alpha NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - SYM SYM _ _ _ _ SpaceAfter=No 44 6 6 NUM CD NumType=Card _ _ _ _ 45 mRNAs mRNA NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 5856 # text = In this study, the effect of anti-E. chaffeensis antibody complexed with E. chaffeensis on the expression of major proinflammatory cytokines in human monocytes was examined. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 effect effect NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 anti-E. anti-E. ADJ JJ Degree=Pos _ _ _ _ 9 chaffeensis chaffeensis NOUN NN Number=Sing _ _ _ _ 10 antibody antibody PRON NN Number=Sing _ _ _ _ 11 complexed complex VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 E. E. PROPN NNP Number=Sing _ _ _ _ 14 chaffeensis chaffeensis NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 major major ADJ JJ Degree=Pos _ _ _ _ 20 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 21 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 25 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 26 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5857 # text = Human monocytic cell line THP-1 was treated with E. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 line line NOUN NN Number=Sing _ _ _ _ 5 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 treated treat VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 E. E. PROPN NNP Number=Sing _ _ _ _ # sent_id = 5858 # text = chaffeensis which had been preincubated with human anti-E. chaffeensis serum for 2 h, and the levels of cytokine mRNAs were evaluated by competitive reverse transcription-PCR. 1 chaffeensis chaffeensis NOUN NN Number=Sing _ _ _ _ 2 which which PRON WDT PronType=Rel _ _ _ _ 3 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 preincubated preincubate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 anti-E. anti-E. ADJ JJ Degree=Pos _ _ _ _ 9 chaffeensis chaffeensis NOUN NN Number=Sing _ _ _ _ 10 serum serum NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 2 2 NUM CD NumType=Card _ _ _ _ 13 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 levels level NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 20 mRNAs mRNA NOUN NNS Number=Plur _ _ _ _ 21 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 evaluated evaluate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 competitive competitive ADJ JJ Degree=Pos _ _ _ _ 25 reverse reverse NOUN NN Number=Sing _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 PCR Pcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5859 # text = Anti-E. chaffeensis antibody complexed with E. chaffeensis significantly enhanced mRNA expression of IL-1beta in THP-1 cells. 1 Anti-E. Anti-e. ADJ JJ Degree=Pos _ _ _ _ 2 chaffeensis chaffeensis NOUN NN Number=Sing _ _ _ _ 3 antibody antibody PRON NN Number=Sing _ _ _ _ 4 complexed complex VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 E. E. PROPN NNP Number=Sing _ _ _ _ 7 chaffeensis chaffeensis PROPN NNPS Number=Plur _ _ _ _ 8 significantly significantly ADV RB _ _ _ _ _ 9 enhanced enhance VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 mRNA mRNa DET DT Definite=Ind|PronType=Art _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 beta beta NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 THP THP NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5860 # text = The expression of TNF-alpha and IL-6 mRNAs was also induced. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 alpha alpha PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 6 6 NUM CD NumType=Card _ _ _ _ 11 mRNAs mRNA NOUN NNS Number=Plur _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 also also ADV RB _ _ _ _ _ 14 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 5861 # text = The levels of secreted IL-1beta, TNF-alpha, and IL-6 during 24 h of stimulation were comparable to those induced by Escherichia coli lipopolysaccharide at 1 microg/ml. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 secreted secret VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 6 6 NUM CD NumType=Card _ _ _ _ 18 during during ADP IN _ _ _ _ _ 19 24 24 NUM CD NumType=Card _ _ _ _ 20 h h NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 23 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 comparable comparable ADJ JJ Degree=Pos _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 27 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 Escherichia Escherichia PROPN NNP Number=Sing _ _ _ _ 30 coli coli NOUN NN Number=Sing _ _ _ _ 31 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 32 at at ADP IN _ _ _ _ _ 33 1 1 NUM CD NumType=Card _ _ _ _ 34 microg microg NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 / / PUNCT , _ _ _ _ SpaceAfter=No 36 ml ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 5862 # text = Fab fragment of anti-E. chaffeensis immunoglobulin 1 Fab Fab ADJ JJ Degree=Pos _ _ _ _ 2 fragment fragment NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 anti-E. anti-E. ADJ JJ Degree=Pos _ _ _ _ 5 chaffeensis chaffeensis NOUN NN Number=Sing _ _ _ _ 6 immunoglobulin immunoglobulin NOUN NN Number=Sing _ _ _ _ # sent_id = 5863 # text = G complexed with E. 1 G g NOUN NN Number=Sing _ _ _ _ 2 complexed complex VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 E. E. PROPN NNP Number=Sing _ _ _ _ # sent_id = 5864 # text = chaffeensis did not induce any of these three cytokines, indicating that ehrlichial binding is required for IL-1beta mRNA expression and that binding of the immune complex to the Fc gamma receptor is required for TNF-alpha and IL-6 mRNA expression and enhanced IL-1beta mRNA expression. 1 chaffeensis chaffeensis NOUN NN Number=Sing _ _ _ _ 2 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 not not PART RB _ _ _ _ _ 4 induce induce VERB VB VerbForm=Inf _ _ _ _ 5 any any DET DT _ _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 three three NUM CD NumType=Card _ _ _ _ 9 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 ehrlichial ehrlichial ADJ JJ Degree=Pos _ _ _ _ 14 binding binding NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 bet bet NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 binding bind VERB VBG VerbForm=Ger _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 immune immune ADJ JJ Degree=Pos _ _ _ _ 31 complex complex NOUN NN Number=Sing _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 Fc Fc PROPN NNP Number=Sing _ _ _ _ 35 gamma gamma NOUN NN Number=Sing _ _ _ _ 36 receptor receptor NOUN NN Number=Sing _ _ _ _ 37 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 for for ADP IN _ _ _ _ _ 40 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 alpha alpha PROPN NNP Number=Sing _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT , _ _ _ _ SpaceAfter=No 46 6 6 NUM CD NumType=Card _ _ _ _ 47 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 48 expression expression NOUN NN Number=Sing _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 51 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 54 beta beta NOUN NN Number=Sing _ _ _ _ 55 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 56 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 5865 # text = Furthermore, prolonged degradation of IkappaB-alpha and activation of NF-kappaB were demonstrated in THP-1 cells exposed to anti-E. chaffeensis serum and E. chaffeensis. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 prolonged prolong VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 degradation degradation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 alpha alpha NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 THP THP NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 exposed expose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 anti-E. anti-E. ADJ JJ Degree=Pos _ _ _ _ 25 chaffeensis chaffeensis NOUN NN Number=Sing _ _ _ _ 26 serum serum NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 E. e. PROPN NNP Number=Sing _ _ _ _ 29 chaffeensis chaffeensis PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5866 # text = This result implies that development of anti-E. chaffeensis antibody in patients can result in the production of major proinflammatory cytokines, which may play an important role in the pathophysiology of ehrlichiosis and immune responses to it. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 result result NOUN NN Number=Sing _ _ _ _ 3 implies imply VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 development development NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 anti-E. anti-E. ADJ JJ Degree=Pos _ _ _ _ 8 chaffeensis chaffeensis NOUN NN Number=Sing _ _ _ _ 9 antibody antibody NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 patients patient NOUN NNS Number=Plur _ _ _ _ 12 can can AUX MD VerbForm=Fin _ _ _ _ 13 result result VERB VB VerbForm=Inf _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 production production NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 major major ADJ JJ Degree=Pos _ _ _ _ 19 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 20 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 may may AUX MD VerbForm=Fin _ _ _ _ 24 play play VERB VB VerbForm=Inf _ _ _ _ 25 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 important important ADJ JJ Degree=Pos _ _ _ _ 27 role role NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 pathophysiology pathophysiology NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 ehrlichiosis ehrlichiosis NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 immune immune ADJ JJ Degree=Pos _ _ _ _ 35 responses response NOUN NNS Number=Plur _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 it it PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5867 # text = Document 003001497 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001497 003001497 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5868 # text = Inhibition of NF-AT-dependent transcription by NF-kappa B: implications for differential gene expression in T helper cell subsets. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 AT AT ADV RB _ _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 : : PUNCT : _ _ _ _ _ 15 implications implication NOUN NNS Number=Plur _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 differential differential ADJ JJ Degree=Pos _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 helper helper ADJ JJR Degree=Cmp _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 subsets subset NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5869 # text = Activation of individual CD4+ T cells results in differential lymphokine expression: interleukin 2 (IL-2) is preferentially produced by T helper type 1 (TH1) cells, which are involved in cell-mediated immune responses, whereas IL-4 is synthesized by TH2 cells, which are essential for humoral immunity. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 individual individual ADJ JJ Degree=Pos _ _ _ _ 4 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 + + SYM SYM _ _ _ _ _ 6 T t NUM CD NumType=Card _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 results result NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 differential differential ADJ JJ Degree=Pos _ _ _ _ 11 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 : : PUNCT : _ _ _ _ _ 14 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 15 2 2 NUM CD NumType=Card _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 preferentially preferentially ADV RB _ _ _ _ _ 23 produced produce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 helper helper NOUN NN Number=Sing _ _ _ _ 27 type type NOUN NN Number=Sing _ _ _ _ 28 1 1 NUM CD NumType=Card _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 TH1 TH1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 which which PRON WDT PronType=Rel _ _ _ _ 35 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 36 involved involved ADJ JJ Degree=Pos _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 cell cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 immune immune NOUN NN Number=Sing _ _ _ _ 42 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 whereas whereas SCONJ IN _ _ _ _ _ 45 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - SYM SYM _ _ _ _ SpaceAfter=No 47 4 4 NUM CD NumType=Card _ _ _ _ 48 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 49 synthesized synthesize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 50 by by ADP IN _ _ _ _ _ 51 TH2 TH2 NUM CD NumType=Card _ _ _ _ 52 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 , , PUNCT , _ _ _ _ _ 54 which which PRON WDT PronType=Rel _ _ _ _ 55 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 56 essential essential ADJ JJ Degree=Pos _ _ _ _ 57 for for ADP IN _ _ _ _ _ 58 humoral humoral ADJ JJ Degree=Pos _ _ _ _ 59 immunity immunity NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 5870 # text = The Ca(2+)-dependent factor NF-ATp plays a key role in the inducible transcription of both these lymphokine genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Ca ca NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 +) +) SYM NFP _ _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 ATp ATp PROPN NNP Number=Sing _ _ _ _ 12 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 key key ADJ JJ Degree=Pos _ _ _ _ 15 role role NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 both both CCONJ CC _ _ _ _ _ 22 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 23 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 24 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5871 # text = However, while IL2 expression requires the contribution of Ca(2+)- and protein kinase C-dependent signals, we report that activation of human IL4 transcription through the Ca(2+)-dependent pathway is diminished by protein kinase C stimulation in Jurkat T cells. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 while while SCONJ IN _ _ _ _ _ 4 IL2 IL2 NUM CD NumType=Card _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 contribution contribution NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 Ca ca PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 +) +) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 kinase kinase NOUN NN Number=Sing _ _ _ _ 18 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 21 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 24 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 IL4 IL4 NUM CD NumType=Card _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ _ 31 through through ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 Ca ca NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 +) +) SYM NFP _ _ _ _ SpaceAfter=No 37 - - SYM SYM _ _ _ _ SpaceAfter=No 38 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 39 pathway pathway NOUN NN Number=Sing _ _ _ _ 40 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 41 diminished diminish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 42 by by ADP IN _ _ _ _ _ 43 protein protein NOUN NN Number=Sing _ _ _ _ 44 kinase kinase NOUN NN Number=Sing _ _ _ _ 45 C c NOUN NN Number=Sing _ _ _ _ 46 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 49 T t PROPN NNP Number=Sing _ _ _ _ 50 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 5872 # text = This phenomenon is due to mutually exclusive binding of NF-ATp and NF-kappa B to the P sequence, an element located 69 bp upstream of the IL4 transcription initiation site. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 phenomenon phenomenon NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 due due ADJ JJ Degree=Pos _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 mutually mutually ADV RB _ _ _ _ _ 7 exclusive exclusive VERB VB VerbForm=Inf _ _ _ _ 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 ATp ATp PROPN NNP Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 P P NOUN NN Number=Sing _ _ _ _ 21 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 element element NOUN NN Number=Sing _ _ _ _ 25 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 69 69 NUM CD NumType=Card _ _ _ _ 27 bp bp NOUN NN Number=Sing _ _ _ _ 28 upstream upstream NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 IL4 IL4 PROPN NNP Number=Sing _ _ _ _ 32 transcription transcription NOUN NN Number=Sing _ _ _ _ 33 initiation initiation NOUN NN Number=Sing _ _ _ _ 34 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 5873 # text = Human IL4 promoter-mediated transcription is downregulated in Jurkat cells stimulated with the NF-kappa B-activating cytokine tumor necrosis factor alpha and suppressed in RelA-overexpressing cells. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 IL4 IL4 NOUN NN Number=Sing _ _ _ _ 3 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 downregulated downregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 activating activate VERB VBG VerbForm=Ger _ _ _ _ 20 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 21 tumor tumor NOUN NN Number=Sing _ _ _ _ 22 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ _ 24 alpha alpha NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 RelA RelA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 overexpressing overexpresse ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 5874 # text = In contrast, protein kinase C stimulation or RelA overexpression does not affect the activity of a human IL4 promoter containing a mouse P sequence, which is a higher-affinity site for NF-ATp and a lower-affinity site for RelA. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ _ 6 C C NOUN NN Number=Sing _ _ _ _ 7 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 RelA Rela NOUN NN Number=Sing _ _ _ _ 10 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 11 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 affect affect VERB VB VerbForm=Inf _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 IL4 Il4 NOUN NN Number=Sing _ _ _ _ 20 promoter promoter NOUN NN Number=Sing _ _ _ _ 21 containing contain VERB VBG VerbForm=Ger _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 mouse mouse NOUN NN Number=Sing _ _ _ _ 24 P p NOUN NN Number=Sing _ _ _ _ 25 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 which which PRON WDT PronType=Rel _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 higher higher ADJ JJR Degree=Cmp _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 affinity affinity NOUN NN Number=Sing _ _ _ _ 33 site site NOUN NN Number=Sing _ _ _ _ 34 for for ADP IN _ _ _ _ _ 35 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 ATp ATp PROPN NNP Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 lower lower ADJ JJR Degree=Cmp _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 affinity affinity NOUN NN Number=Sing _ _ _ _ 43 site site NOUN NN Number=Sing _ _ _ _ 44 for for ADP IN _ _ _ _ _ 45 RelA RelA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 5875 # text = Thus, competition between two general transcriptional activators, RelA and NF-ATp, mediates the inhibitory effect of protein kinase C stimulation on IL4 expression and may contribute to differential gene expression in TH cells. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 competition competition NOUN NN Number=Sing _ _ _ _ 4 between between ADP IN _ _ _ _ _ 5 two two NUM CD NumType=Card _ _ _ _ 6 general general ADJ JJ Degree=Pos _ _ _ _ 7 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 8 activators activator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 RelA RelA PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 ATp ATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 19 effect effect NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ _ 22 kinase kinase NOUN NN Number=Sing _ _ _ _ 23 C c NOUN NN Number=Sing _ _ _ _ 24 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 IL4 IL4 NUM CD NumType=Card _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 may may AUX MD VerbForm=Fin _ _ _ _ 30 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 differential differential VERB VB VerbForm=Inf _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 TH th ADJ JJ Degree=Pos _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5876 # text = Document 003001505 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001505 003001505 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5877 # text = Epstein-Barr virus-transforming protein latent infection membrane protein 1 activates transcription factor NF-kappaB through a pathway that includes the NF-kappaB-inducing kinase and the IkappaB kinases IKKalpha and IKKbeta. 1 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 Barr Barr PROPN NNP Number=Sing _ _ _ _ 4 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 transforming transform VERB VBG VerbForm=Ger _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 latent latent ADJ JJ Degree=Pos _ _ _ _ 9 infection infection NOUN NN Number=Sing _ _ _ _ 10 membrane membrane NOUN NN Number=Sing _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 1 1 NUM CD NumType=Card _ _ _ _ 13 activates activate NOUN NNS Number=Plur _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 19 through through ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 pathway pathway NOUN NN Number=Sing _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 includes include VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappaB-inducing kappaB-inducing NOUN NN Number=Sing _ _ _ _ 28 kinase kinase NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 IkappaB Ikappab NOUN NN Number=Sing _ _ _ _ 32 kinases kinase NOUN NNS Number=Plur _ _ _ _ 33 IKKalpha IKKalpha PROPN NNP Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 IKKbeta IKKbeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5878 # text = The Epstein-Barr virus oncoprotein latent infection membrane protein 1 (LMP1) is a constitutively aggregated pseudo-tumor necrosis factor receptor (TNFR) that activates transcription factor NF-kappaB through two sites in its C-terminal cytoplasmic domain. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 Barr Barr PROPN NNP Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 oncoprotein oncoprotein ADV WRB PronType=Rel _ _ _ _ 7 latent latent ADJ JJ Degree=Pos _ _ _ _ 8 infection infection NOUN NN Number=Sing _ _ _ _ 9 membrane membrane NOUN NN Number=Sing _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 1 1 NUM CD NumType=Card _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 LMP1 Lmp1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 constitutively constitutively ADV RB _ _ _ _ _ 18 aggregated aggregate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 pseudo pseudo NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 tumor tumor NOUN NN Number=Sing _ _ _ _ 22 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ _ 24 receptor receptor NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 TNFR TNFR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 that that PRON WDT PronType=Rel _ _ _ _ 29 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ _ 31 factor factor NOUN NN Number=Sing _ _ _ _ 32 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 35 through through ADP IN _ _ _ _ _ 36 two two NUM CD NumType=Card _ _ _ _ 37 sites site NOUN NNS Number=Plur _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 40 C- C- NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 42 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 43 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 5879 # text = One site is similar to activated TNFRII in associating with TNFR-associated factors TRAF1 and TRAF2, and the second site is similar to TNFRI in associating with the TNFRI death domain interacting protein TRADD. 1 One one NUM CD NumType=Card _ _ _ _ 2 site site NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 similar similar ADJ JJ Degree=Pos _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 TNFRII TNFRII PROPN NNP Number=Sing _ _ _ _ 8 in in SCONJ IN _ _ _ _ _ 9 associating associat VERB VBG VerbForm=Ger _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 TNFR TNFR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 factors factor NOUN NNS Number=Plur _ _ _ _ 15 TRAF1 TRAF1 NUM CD NumType=Card _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 TRAF2 Traf2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 22 site site NOUN NN Number=Sing _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 similar similar ADJ JJ Degree=Pos _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 TNFRI TNFRI PROPN NNP Number=Sing _ _ _ _ 27 in in SCONJ IN _ _ _ _ _ 28 associating associate VERB VBG VerbForm=Ger _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 TNFRI TNFRI PROPN NNP Number=Sing _ _ _ _ 32 death death NOUN NN Number=Sing _ _ _ _ 33 domain domain NOUN NN Number=Sing _ _ _ _ 34 interacting interact VERB VBG VerbForm=Ger _ _ _ _ 35 protein protein NOUN NN Number=Sing _ _ _ _ 36 TRADD tRADd NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 5880 # text = TNFRI has been recently shown to activate NF-kappaB through association with TRADD, RIP, and TRAF2; activation of the NF-kappaB-inducing kinase (NIK); activation of the IkappaB alpha kinases (IKKalpha and IKKbeta); and phosphorylation of IkappaB alpha. 1 TNFRI TNFRI PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 4 recently recently ADV RB _ _ _ _ _ 5 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 activate activate VERB VB VerbForm=Inf _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 11 through through ADP IN _ _ _ _ _ 12 association association NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 TRADD tRADd NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 RIP rip INTJ UH _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 TRAF2 TRAF2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ; ; PUNCT , _ _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 29 kinase kinase NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 NIK NIK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 ; ; PUNCT , _ _ _ _ _ 34 activation activation NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ _ 38 alpha alpha NOUN NN Number=Sing _ _ _ _ 39 kinases kinase NOUN NNS Number=Plur _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 IKKalpha IKKalpha PROPN NNP Number=Sing _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 IKKbeta IKKbeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 45 ; ; PUNCT , _ _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ _ 50 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 5881 # text = IkappaB alpha phosphorylation on Ser-32 and Ser-36 is followed by its degradation and NF-kappaB activation. 1 IkappaB Ikappab X LS _ _ _ _ _ 2 alpha alpha X FW Foreign=Yes _ _ _ _ 3 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 Ser Ser PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 -32 -32 NUM CD NumType=Card _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 Ser Ser PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 -36 -36 NUM CD NumType=Card _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 followed follow VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 degradation degradation NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 5882 # text = In this report, we show that NF-kappaB activation by LMP1 or by each of its effector sites is mediated by a pathway that includes NIK, IKKalpha, and IKKbeta. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 LMP1 LMP1 NUM CD NumType=Card _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 each each DET DT _ _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 effector effector NOUN NN Number=Sing _ _ _ _ 20 sites site NOUN NNS Number=Plur _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 pathway pathway NOUN NN Number=Sing _ _ _ _ 26 that that PRON WDT PronType=Rel _ _ _ _ 27 includes include VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 NIK NIK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 IKKalpha IKKalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 IKKbeta IKKbeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 5883 # text = Dominant negative mutants of NIK, IKKalpha, or IKKbeta substantially inhibited NF-kappaB activation by LMP1 or by each of its effector sites. 1 Dominant dominant ADJ JJ Degree=Pos _ _ _ _ 2 negative negative ADJ JJ Degree=Pos _ _ _ _ 3 mutants mutant NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NIK NIK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 IKKalpha IKKalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 IKKbeta IKKbeta PROPN NNP Number=Sing _ _ _ _ 11 substantially substantially ADV RB _ _ _ _ _ 12 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 LMP1 LMP1 NUM CD NumType=Card _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 each each DET DT _ _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 effector effector NOUN NN Number=Sing _ _ _ _ 25 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5884 # text = Document 003001507 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001507 003001507 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5885 # text = Inhibition of NF-kappa B activation in vitro and in vivo: role of 26S proteasome. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 vitro vitro NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 : : PUNCT : _ _ _ _ _ 14 role role NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 26 26 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 S S NOUN NN Number=Sing _ _ _ _ 18 proteasome proteasome NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5886 # text = It is becoming increasingly apparent that NF-kappa B plays a critical role in regulating the inflammatory response. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 becoming become VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 4 increasingly increasingly ADV RB _ _ _ _ _ 5 apparent apparent ADJ JJ Degree=Pos _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 critical critical ADJ JJ Degree=Pos _ _ _ _ 14 role role NOUN NN Number=Sing _ _ _ _ 15 in in SCONJ IN _ _ _ _ _ 16 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 5887 # text = Data obtained from studies in our laboratories demonstrate that the proteasome plays an important role in the inflammatory cascade by regulating the activation of NF-kappa B. 1 Data data PROPN NNP Number=Sing _ _ _ _ 2 obtained obtain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 7 laboratories laboratory NOUN NNS Number=Plur _ _ _ _ 8 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 proteasome proteasome NOUN NN Number=Sing _ _ _ _ 12 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 important important ADJ JJ Degree=Pos _ _ _ _ 15 role role NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 19 cascade cascade NOUN NN Number=Sing _ _ _ _ 20 by by SCONJ IN _ _ _ _ _ 21 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa PROPN NNP Number=Sing _ _ _ _ 28 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5888 # text = Indeed, the availability of selective and orally active proteasome inhibitors should prove useful in delineating the roles of the proteasome and NF-kappa B in other pathophysiological conditions such as cancer and heart disease. 1 Indeed indeed ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 availability availability NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 selective selective ADJ JJ Degree=Pos _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 orally orally ADV RB _ _ _ _ _ 9 active active ADJ JJ Degree=Pos _ _ _ _ 10 proteasome proteasome ADJ JJ Degree=Pos _ _ _ _ 11 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 12 should should AUX MD VerbForm=Fin _ _ _ _ 13 prove prove VERB VB VerbForm=Inf _ _ _ _ 14 useful useful ADJ JJ Degree=Pos _ _ _ _ 15 in in SCONJ IN _ _ _ _ _ 16 delineating delineat VERB VBG VerbForm=Ger _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 roles role NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 proteasome proteasome NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 other other ADJ JJ Degree=Pos _ _ _ _ 29 pathophysiological pathophysiological ADJ JJ Degree=Pos _ _ _ _ 30 conditions condition NOUN NNS Number=Plur _ _ _ _ 31 such such ADJ JJ Degree=Pos _ _ _ _ 32 as as ADP IN _ _ _ _ _ 33 cancer cancer NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 heart heart NOUN NN Number=Sing _ _ _ _ 36 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5889 # text = Document 003001511 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001511 003001511 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5890 # text = Transactivation by CIITA, the type II bare lymphocyte syndrome-associated factor, requires participation of multiple regions of the TATA box binding protein. 1 Transactivation Transactivation NOUN NN Number=Sing _ _ _ _ 2 by by ADP IN _ _ _ _ _ 3 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 type type NOUN NN Number=Sing _ _ _ _ 7 II ii NUM CD NumType=Card _ _ _ _ 8 bare bear ADJ JJ Degree=Pos _ _ _ _ 9 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 10 syndrome syndrome NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 participation participation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 19 regions region NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 TATA TATa NOUN NN Number=Sing _ _ _ _ 23 box box NOUN NN Number=Sing _ _ _ _ 24 binding bind VERB VBG VerbForm=Ger _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5891 # text = CIITA is a positive regulator of class II major histocompatibility complex gene transcription that has been found to be defective in one of the five complementation groups of class II major histocompatibility complex-negative cell lines. 1 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 positive positive ADJ JJ Degree=Pos _ _ _ _ 5 regulator regulator NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 class class NOUN NN Number=Sing _ _ _ _ 8 II ii NUM CD NumType=Card _ _ _ _ 9 major major ADJ JJ Degree=Pos _ _ _ _ 10 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 11 complex complex NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 17 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 defective defective ADJ JJ Degree=Pos _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 one one NUM CD NumType=Card _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 five five NUM CD NumType=Card _ _ _ _ 26 complementation complementation NOUN NN Number=Sing _ _ _ _ 27 groups group NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 class class NOUN NN Number=Sing _ _ _ _ 30 II ii NUM CD NumType=Card _ _ _ _ 31 major major ADJ JJ Degree=Pos _ _ _ _ 32 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 33 complex complex ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 34 - - PUNCT , _ _ _ _ SpaceAfter=No 35 negative negative ADJ JJ Degree=Pos _ _ _ _ 36 cell cell NOUN NN Number=Sing _ _ _ _ 37 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 5892 # text = Its N-terminal region is capable of activating transcription from a reporter gene when fused to a DNA binding domain. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 2 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 N- N- SYM NFP _ _ _ _ SpaceAfter=No 4 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 5 region region NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 capable capable ADJ JJ Degree=Pos _ _ _ _ 8 of of SCONJ IN _ _ _ _ _ 9 activating activate VERB VBG VerbForm=Ger _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 reporter reporter NOUN NN Number=Sing _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 when when ADV WRB PronType=Int _ _ _ _ 16 fused fuse VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 DNA dna NOUN NN Number=Sing _ _ _ _ 20 binding binding VERB VBG VerbForm=Ger _ _ _ _ 21 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5893 # text = We have investigated the mechanism of transactivation mediated by the CIITA activation domain by studying its role in the process of transcription initiation and elongation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 8 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 domain domain NOUN NN Number=Sing _ _ _ _ 14 by by SCONJ IN _ _ _ _ _ 15 studying study VERB VBG VerbForm=Ger _ _ _ _ 16 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 17 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 role role NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 process process NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 initiation initiation NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 elongation elongation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5894 # text = Specifically the altered specificity TBP (TATA box binding protein) assay has been used to analyze the response of the CIITA activation domain to mutations in TBP known to disrupt its interaction with its associated general factors. 1 Specifically specifically ADV RB _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 altered alter ADJ JJ Degree=Pos _ _ _ _ 4 specificity specificity NOUN NN Number=Sing _ _ _ _ 5 TBP Tbp NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 TATA TATa NOUN NN Number=Sing _ _ _ _ 8 box box NOUN NN Number=Sing _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 assay assay NOUN NN Number=Sing _ _ _ _ 13 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 15 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 analyze analyze VERB VB VerbForm=Inf _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 domain domain NOUN NN Number=Sing _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 mutations mutation NOUN NNS Number=Plur _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 TBP TBP PROPN NNP Number=Sing _ _ _ _ 29 known known PROPN NNP Number=Sing _ _ _ _ 30 to to PART TO _ _ _ _ _ 31 disrupt disrupt VERB VB VerbForm=Inf _ _ _ _ 32 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 33 interaction interaction NOUN NN Number=Sing _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 36 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 general general ADJ JJ Degree=Pos _ _ _ _ 38 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 5895 # text = Transactivation by CIITA was extremely sensitive to a mutation in TBP that in yeast is known to abolish VP16-mediated transcription but leaves basal transcription unaffected. 1 Transactivation Transactivation NOUN NN Number=Sing _ _ _ _ 2 by by ADP IN _ _ _ _ _ 3 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 extremely extremely ADV RB _ _ _ _ _ 6 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 mutation mutation NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 TBP TBP PROPN NNP Number=Sing _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 yeast yeast NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 abolish abolish VERB VB VerbForm=Inf _ _ _ _ 19 VP VP NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 16 16 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 but but CCONJ CC _ _ _ _ _ 25 leaves leave VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 basal basal ADJ JJ Degree=Pos _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 unaffected unaffected ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5896 # text = A TBP mutant defective in interaction with TBP-associated factor TAFII250 also failed to mediate transactivation through the CIITA activation domain. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 TBP TBP NOUN NN Number=Sing _ _ _ _ 3 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 4 defective defective ADJ JJ Degree=Pos _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 interaction interaction NOUN NN Number=Sing _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 TBP TBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 TAFII250 TAFII250 NUM CD NumType=Card _ _ _ _ 13 also also ADV RB _ _ _ _ _ 14 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 17 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 18 through through ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 5897 # text = Certain interactions between TBP and general factors that are specifically required for acidic activation domains were also required for CIITA-mediated transactivation to reach its full potential. 1 Certain certain ADJ JJ Degree=Pos _ _ _ _ 2 interactions interaction NOUN NNS Number=Plur _ _ _ _ 3 between between ADP IN _ _ _ _ _ 4 TBP Tbp NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 general general ADJ JJ Degree=Pos _ _ _ _ 7 factors factor NOUN NNS Number=Plur _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 specifically specifically ADV RB _ _ _ _ _ 11 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 acidic acidic ADJ JJ Degree=Pos _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 domains domain NOUN NNS Number=Plur _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 also also ADV RB _ _ _ _ _ 18 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 reach reach VERB VB VerbForm=Inf _ _ _ _ 26 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 27 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 full full ADJ JJ Degree=Pos _ _ _ _ 29 potential potential NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5898 # text = Finally, like VP16, CIITA was able to stimulate elongation of transcription. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 like like ADP IN _ _ _ _ _ 4 VP16 VP16 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 able able ADJ JJ Degree=Pos _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 11 elongation elongation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 5899 # text = Overall the mechanism of transactivation by the human B-cell-specific CIITA is very similar to that mediated by the herpes virus transactivator VP16 in the ways that have been tested. 1 Overall overall ADV RB _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 CIITA CIITa NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 very very ADV RB _ _ _ _ _ 16 similar similar ADJ JJ Degree=Pos _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 19 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 herpes herpe NOUN NN Number=Sing _ _ _ _ 23 virus virus NOUN NN Number=Sing _ _ _ _ 24 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 25 VP vp NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 16 16 NUM CD NumType=Card _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 ways way NOUN NNS Number=Plur _ _ _ _ 30 that that PRON WDT PronType=Rel _ _ _ _ 31 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 32 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 33 tested test VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5900 # text = Document 003001513 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001513 003001513 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5901 # text = Transactivation of the human immunodeficiency virus promoter by human herpesvirus 6 (HHV-6) strains GS and Z-29 in primary human T lymphocytes and identification of transactivating HHV-6(GS) gene fragments. 1 Transactivation Transactivation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 promoter promoter NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 herpesvirus herpesvirus NOUN NN Number=Sing _ _ _ _ 11 6 6 NUM CD NumType=Card _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 HHV Hhv NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 strains strain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 GS GS PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 Z Z PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 29 29 NUM CD NumType=Card _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 primary primary ADJ JJ Degree=Pos _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 T t PROPN NNP Number=Sing _ _ _ _ 27 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 identification identification NOUN NN Number=Sing _ _ _ _ 30 of of SCONJ IN _ _ _ _ _ 31 transactivating transactivat VERB VBG VerbForm=Ger _ _ _ _ 32 HHV HHV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - SYM SYM _ _ _ _ SpaceAfter=No 34 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 GS GS NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 gene gene NOUN NN Number=Sing _ _ _ _ 39 fragments fragment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5902 # text = Human herpesvirus 6 (HHV-6) can activate the human immunodeficiency virus (HIV) promoter and accelerate cytopathic effects in HIV-infected human T cells. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 herpesvirus herpesvirus NOUN NN Number=Sing _ _ _ _ 3 6 6 NUM CD NumType=Card _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 HHV Hhv NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 can can AUX MD VerbForm=Fin _ _ _ _ 10 activate activate VERB VB VerbForm=Inf _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 14 virus virus NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 promoter promoter VERB VB VerbForm=Inf _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 accelerate accelerate VERB VB VerbForm=Inf _ _ _ _ 21 cytopathic cytopathic ADJ JJ Degree=Pos _ _ _ _ 22 effects effect NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 HIV- HIV- SYM NFP _ _ _ _ SpaceAfter=No 25 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 T t PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5903 # text = This study examines the regions of the HIV promoter required for HHV-6 transactivation in a heterogeneous population of primary human T lymphocytes with or without antigenic stimulation. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 examines examine VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 regions region NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 HIV HIV PROPN NNP Number=Sing _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 HHV HHV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 6 6 NUM CD NumType=Card _ _ _ _ 15 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 heterogeneous heterogeneous ADJ JJ Degree=Pos _ _ _ _ 19 population population NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 primary primary ADJ JJ Degree=Pos _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 T T PROPN NNP Number=Sing _ _ _ _ 24 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 without without ADP IN _ _ _ _ _ 28 antigenic antigenic ADJ JJ Degree=Pos _ _ _ _ 29 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5904 # text = Two different strains of HHV-6, GS and Z29, transactivated the HIV promoter. 1 Two two NUM CD NumType=Card _ _ _ _ 2 different different ADJ JJ Degree=Pos _ _ _ _ 3 strains strains NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 HHV HHV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 GS GS PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 Z29 Z29 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 transactivated transactivate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 HIV HIV PROPN NNP Number=Sing _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 5905 # text = The GS strain transactivated the promoter in both stimulated and resting T cells, while the Z29 strain increased HIV promoter activity only in stimulated T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 GS GS PROPN NNP Number=Sing _ _ _ _ 3 strain strain NOUN NN Number=Sing _ _ _ _ 4 transactivated transactivate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 promoter promoter NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 both both CCONJ CC _ _ _ _ _ 9 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 resting reste VERB VBG VerbForm=Ger _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 while while SCONJ IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 Z29 Z29 PROPN NNP Number=Sing _ _ _ _ 18 strain strain NOUN NN Number=Sing _ _ _ _ 19 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 HIV HIV PROPN NNP Number=Sing _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 only only ADV RB _ _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 stimulated stimulated ADJ JJ Degree=Pos _ _ _ _ 26 T T PROPN NNP Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5906 # text = Three DNA clones containing HHV-6(GS) genomic fragments transactivated the HIV promoter in cotransfected T cells. 1 Three three NUM CD NumType=Card _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ _ 3 clones clone NOUN NNS Number=Plur _ _ _ _ 4 containing contain VERB VBG VerbForm=Ger _ _ _ _ 5 HHV HHV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 GS GS NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 12 fragments fragment NOUN NNS Number=Plur _ _ _ _ 13 transactivated transactivate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 HIV HIV PROPN NNP Number=Sing _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 cotransfected cotransfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 5907 # text = A 21.4-kb DNA clone, pZVB70, showed the highest transactivating ability, while two other DNA fragments, pZVB10 (6.2 kb) and pZVH14 (8.7 kb), showed lower activity. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 21.4 21.4 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kb kb NOUN NN Number=Sing _ _ _ _ 5 DNA dna NOUN NN Number=Sing _ _ _ _ 6 clone clone NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 pZVB70 pZVB70 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 highest highest ADJ JJS Degree=Sup _ _ _ _ 13 transactivating transactivating NOUN NN Number=Sing _ _ _ _ 14 ability ability NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 while while SCONJ IN _ _ _ _ _ 17 two two NUM CD NumType=Card _ _ _ _ 18 other other ADJ JJ Degree=Pos _ _ _ _ 19 DNA dna NOUN NN Number=Sing _ _ _ _ 20 fragments fragment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 pZVB pzvb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 10 10 NUM CD NumType=Card _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 6.2 6.2 NUM CD NumType=Card _ _ _ _ 26 kb kb NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 pZVH14 pZVH14 NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 8.7 8.7 NUM CD NumType=Card _ _ _ _ 32 kb kb NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 lower lower ADJ JJR Degree=Cmp _ _ _ _ 37 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 5908 # text = One of these clones, pZVH14, activated the HIV promoter construct containing a mutation in the NF kappa B site. 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 pZVH14 pZVH14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 HIV HIV PROPN NNP Number=Sing _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 construct construct NOUN NN Number=Sing _ _ _ _ 13 containing contain VERB VBG VerbForm=Ger _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 mutation mutation NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ _ 19 kappa kappa PROPN NNP Number=Sing _ _ _ _ 20 B B PROPN NNP Number=Sing _ _ _ _ 21 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5909 # text = However, this mutated NF kappa B promoter was not transactivated during HHV-6(GS) infection or after cotransfection with pZVB70 or pZVB10. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 4 mutated mutate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ _ 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B b PROPN NNP Number=Sing _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 transactivated transactivate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 during during ADP IN _ _ _ _ _ 13 HHV HHV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 GS GS NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 infection infection NOUN NN Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 after after ADP IN _ _ _ _ _ 22 cotransfection cotransfection NOUN NN Number=Sing _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 pZVB70 pZVB70 NUM CD NumType=Card _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 pZVB pzvb NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5910 # text = These data indicate that the NF kappa B sites of the HIV promoter are essential for its transactivation during HHV-6(GS) infection. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ _ 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 sites site NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 HIV HIV PROPN NNP Number=Sing _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 essential essential ADJ JJ Degree=Pos _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 19 during during ADP IN _ _ _ _ _ 20 HHV HHV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - SYM SYM _ _ _ _ SpaceAfter=No 22 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 GS GS NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 5911 # text = By increasing HIV promoter activity in primary T lymphocytes, HHV-6 may consequently increase HIV replication, leading to an increase in the cytopathic effect on coinfected human T cells. 1 By by SCONJ IN _ _ _ _ _ 2 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 3 HIV HIV PROPN NNP Number=Sing _ _ _ _ 4 promoter promoter NOUN NN Number=Sing _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 primary primary ADJ JJ Degree=Pos _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 HHV HHV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 6 6 NUM CD NumType=Card _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 consequently consequently ADV RB _ _ _ _ _ 16 increase increase VERB VB VerbForm=Inf _ _ _ _ 17 HIV HIV PROPN NNP Number=Sing _ _ _ _ 18 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 leading lead VERB VBG VerbForm=Ger _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 increase increase NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 cytopathic cytopathic ADJ JJ Degree=Pos _ _ _ _ 27 effect effect NOUN NN Number=Sing _ _ _ _ 28 on on ADP IN _ _ _ _ _ 29 coinfected coinfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5912 # text = Document 003001514 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001514 003001514 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5913 # text = HIV1 infection of human monocytes and macrophages promotes induction or translocation of NF-KB-related factors. 1 HIV1 HIV1 NUM CD NumType=Card _ _ _ _ 2 infection infection NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 8 promotes promote VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 translocation translocation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 KB KB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 related related ADJ JJ Degree=Pos _ _ _ _ 18 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5914 # text = In 1991, we demonstrated, using electrophoretic mobility shift assays, that 3 different factors (termed B1, B2 and B3) with affinity for the KB-enhancer target sequence were specifically detected in nuclear extracts from HIV1-infected monocytes and macrophages. 1 In in ADP IN _ _ _ _ _ 2 1991 1991 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 using use VERB VBG VerbForm=Ger _ _ _ _ 8 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 9 mobility mobility NOUN NN Number=Sing _ _ _ _ 10 shift shift NOUN NN Number=Sing _ _ _ _ 11 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 3 3 NUM CD NumType=Card _ _ _ _ 15 different different ADJ JJ Degree=Pos _ _ _ _ 16 factors factor NOUN NNS Number=Plur _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 B1 b1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 B2 b2 NUM CD NumType=Card _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 B3 B3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 affinity affinity NOUN NN Number=Sing _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 KB KB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 32 target target NOUN NN Number=Sing _ _ _ _ 33 sequence sequence NOUN NN Number=Sing _ _ _ _ 34 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 specifically specifically ADV RB _ _ _ _ _ 36 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 39 extracts extract NOUN NNS Number=Plur _ _ _ _ 40 from from ADP IN _ _ _ _ _ 41 HIV1 HIV1 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 5915 # text = The B2 factor was induced in the nuclei of these cells only upon HIV1 infection. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 B2 b2 NUM CD NumType=Card _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 nuclei nuclei NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 only only ADV RB _ _ _ _ _ 13 upon upon ADP IN _ _ _ _ _ 14 HIV1 HIV1 NUM CD NumType=Card _ _ _ _ 15 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 5916 # text = The B3 factor was only slightly evident in nuclei of uninfected cells but was readily detectable in nuclei of infected monocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 B3 B3 NUM CD NumType=Card _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 only only ADV RB _ _ _ _ _ 6 slightly slightly ADV RB _ _ _ _ _ 7 evident evident ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 nuclei nuclei NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 uninfected uninfected ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 readily readily ADV RB _ _ _ _ _ 16 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 nuclei nuclei NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 infected infect ADJ JJ Degree=Pos _ _ _ _ 21 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5917 # text = Its expression remained very low in nuclei of HIV1-infected macrophages. 1 Its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 very very ADV RB _ _ _ _ _ 5 low low ADV RB Degree=Pos _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 HIV1 HIV1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 5918 # text = In this paper, we demonstrate that the B2 factor is expressed in the cytosol of monocytes and macrophages as a DNA-binding protein, indicating that it is not associated with an inhibitor (IKB). 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 paper paper NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 B2 b2 NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 binding binding VERB VBG VerbForm=Ger _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 28 that that SCONJ IN _ _ _ _ _ 29 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 not not PART RB _ _ _ _ _ 32 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 IKB IKB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 5919 # text = This factor remained clustered in the cytosol and was translocated to the nuclei only after HIV1 infection. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 clustered cluster VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 translocated translocate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 14 only only ADV RB _ _ _ _ _ 15 after after ADP IN _ _ _ _ _ 16 HIV1 HIV1 NUM CD NumType=Card _ _ _ _ 17 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 5920 # text = The B3 factor is detected in the cytosol only when cells are HIV1-infected. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 B3 B3 NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 9 only only ADV RB _ _ _ _ _ 10 when when ADV WRB PronType=Int _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 HIV1 HIV1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 5921 # text = The role of HIV1 infection in the expression and the translocation of these factors is discussed. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 HIV1 HIV1 NUM CD NumType=Card _ _ _ _ 5 infection infection NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 translocation translocation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 14 factors factor NOUN NNS Number=Plur _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 discussed discuss VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5922 # text = Document 003001522 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001522 003001522 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5923 # text = The intracellular parasite Theileria parva protects infected T cells from apoptosis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 3 parasite parasite NOUN NN Number=Sing _ _ _ _ 4 Theileria Theileria NOUN NN Number=Sing _ _ _ _ 5 parva parva NOUN NN Number=Sing _ _ _ _ 6 protects protect NOUN NNS Number=Plur _ _ _ _ 7 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5924 # text = Parasites have evolved a plethora of strategies to ensure their survival. 1 Parasites Parasite NOUN NNS Number=Plur _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 evolved evolve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 plethora plethora NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 strategies strategy NOUN NNS Number=Plur _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 ensure ensure VERB VB VerbForm=Inf _ _ _ _ 10 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 11 survival survival NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 5925 # text = The intracellular parasite Theileria parva secures its propagation and spreads through the infected animal by infecting and transforming T cells, inducing their continuous proliferation and rendering them metastatic. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 3 parasite parasite NOUN NN Number=Sing _ _ _ _ 4 Theileria Theileria NOUN NN Number=Sing _ _ _ _ 5 parva parva NOUN NN Number=Sing _ _ _ _ 6 secures secure VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 8 propagation propagation NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 spreads spread NOUN NNS Number=Plur _ _ _ _ 11 through through ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 animal animal NOUN NN Number=Sing _ _ _ _ 15 by by SCONJ IN _ _ _ _ _ 16 infecting infecte VERB VBG VerbForm=Ger _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 transforming transform VERB VBG VerbForm=Ger _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 23 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 continuous continuous ADJ JJ Degree=Pos _ _ _ _ 25 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 rendering render VERB VBG VerbForm=Ger _ _ _ _ 28 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ _ 29 metastatic metastatic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5926 # text = In previous work, we have shown that the parasite induces constitutive activation of the transcription factor NF-kappaB, by inducing the constitutive degradation of its cytoplasmic inhibitors. 1 In in ADP IN _ _ _ _ _ 2 previous previous ADJ JJ Degree=Pos _ _ _ _ 3 work work NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 parasite parasite NOUN NN Number=Sing _ _ _ _ 11 induces induces VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 by by SCONJ IN _ _ _ _ _ 23 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 26 degradation degradation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 29 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 30 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 5927 # text = The biological significance of NF-kappaB activation in T. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 biological biological ADJ JJ Degree=Pos _ _ _ _ 3 significance significance NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 T. T. PROPN NNP Number=Sing _ _ _ _ # sent_id = 5928 # text = parva-infected cells, however, has not yet been defined. 1 parva-infected parva-infected ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 however however ADV RB _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 yet yet ADV RB _ _ _ _ _ 9 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 10 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 5929 # text = Cells that have been transformed by viruses or oncogenes can persist only if they manage to avoid destruction by the apoptotic mechanisms that are activated on transformation and that contribute to maintain cellular homeostasis. 1 Cells cell NOUN NNS Number=Plur _ _ _ _ 2 that that PRON WDT PronType=Rel _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 transformed transform VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 viruses virus NOUN NNS Number=Plur _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 oncogenes oncogene NOUN NNS Number=Plur _ _ _ _ 10 can can AUX MD VerbForm=Fin _ _ _ _ 11 persist persist VERB VB VerbForm=Inf _ _ _ _ 12 only only ADV RB _ _ _ _ _ 13 if if SCONJ IN _ _ _ _ _ 14 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 15 manage manage VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 avoid avoid VERB VB VerbForm=Inf _ _ _ _ 18 destruction destruction NOUN NN Number=Sing _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 22 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 23 that that PRON WDT PronType=Rel _ _ _ _ 24 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 transformation transformation NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 30 contribute contribute NOUN NN Number=Sing _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 maintain maintain VERB VB VerbForm=Inf _ _ _ _ 33 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 34 homeostasis homeostasis NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 5930 # text = We now demonstrate that parasite-induced NF-kappaB activation plays a crucial role in the survival of T. parva-transformed 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 now now ADV RB _ _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 parasite parasite NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 15 role role NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 survival survival NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 T. T. PROPN NNP Number=Sing _ _ _ _ 21 parva parva NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ # sent_id = 5931 # text = T cells by conveying protection against an apoptotic signal that accompanies parasite-mediated transformation. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 by by SCONJ IN _ _ _ _ _ 4 conveying convey VERB VBG VerbForm=Ger _ _ _ _ 5 protection protection NOUN NN Number=Sing _ _ _ _ 6 against against ADP IN _ _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 9 signal signal NOUN NN Number=Sing _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 accompanies accompany VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 parasite parasite NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 transformation transformation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 5932 # text = Consequently, inhibition of NF-kappaB nuclear translocation and the expression of dominant negative mutant forms of components of the NF-kappaB activation pathway, such as IkappaBalpha or p65, prompt rapid apoptosis of T. parva-transformed 1 Consequently consequently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 translocation translocation NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 15 negative negative ADJ JJ Degree=Pos _ _ _ _ 16 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 17 forms form NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 components component NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 such such ADJ JJ Degree=Pos _ _ _ _ 29 as as ADP IN _ _ _ _ _ 30 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 31 or or CCONJ CC _ _ _ _ _ 32 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 prompt prompt ADJ JJ Degree=Pos _ _ _ _ 35 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 36 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 T. T. PROPN NNP Number=Sing _ _ _ _ 39 parva parva NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ # sent_id = 5933 # text = T cells. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 . . PUNCT . _ _ _ _ _ # sent_id = 5934 # text = Our findings offer important insights into parasite survival strategies and demonstrate that parasite-induced constitutive NF-kappaB activation is an essential step in maintaining the transformed phenotype of the infected cells. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 offer offer VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 important important ADJ JJ Degree=Pos _ _ _ _ 5 insights insight NOUN NNS Number=Plur _ _ _ _ 6 into into ADP IN _ _ _ _ _ 7 parasite parasite NOUN NN Number=Sing _ _ _ _ 8 survival survival NOUN NN Number=Sing _ _ _ _ 9 strategies strategy NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 13 parasite parasite NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 essential essential ADJ JJ Degree=Pos _ _ _ _ 24 step step NOUN NN Number=Sing _ _ _ _ 25 in in SCONJ IN _ _ _ _ _ 26 maintaining maintain VERB VBG VerbForm=Ger _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 infected infect ADJ JJ Degree=Pos _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5935 # text = Document 003001525 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001525 003001525 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5936 # text = TAL1 and LIM-only proteins synergistically induce retinaldehyde dehydrogenase 2 expression in T-cell acute lymphoblastic leukemia by acting as cofactors for GATA3. 1 TAL1 tAL1 NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 LIM LIm NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 only only ADV RB _ _ _ _ _ 6 proteins protein NOUN NNS Number=Plur _ _ _ _ 7 synergistically synergistically ADV RB _ _ _ _ _ 8 induce induce ADJ JJ Degree=Pos _ _ _ _ 9 retinaldehyde retinaldehyde NOUN NN Number=Sing _ _ _ _ 10 dehydrogenase dehydrogenase NOUN NN Number=Sing _ _ _ _ 11 2 2 NUM CD NumType=Card _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 acute acute ADJ JJ Degree=Pos _ _ _ _ 17 lymphoblastic lymphoblastic ADJ JJ Degree=Pos _ _ _ _ 18 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 19 by by SCONJ IN _ _ _ _ _ 20 acting act VERB VBG VerbForm=Ger _ _ _ _ 21 as as ADP IN _ _ _ _ _ 22 cofactors cofactor NOUN NNS Number=Plur _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 GATA3 GATA3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5937 # text = Previously, we have shown that TAL1 and the LIM-only protein gene (LMO) are regularly coactivated in T-cell acute lymphoblastic leukemia (T-ALL). 1 Previously previously ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 TAL1 tAL1 NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 LIM LIm NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 only only ADV RB _ _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 LMO LMO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 regularly regularly ADV RB _ _ _ _ _ 20 coactivated coactivate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 acute acute ADV RB _ _ _ _ _ 25 lymphoblastic lymphoblastic ADJ JJ Degree=Pos _ _ _ _ 26 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 T T NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 ALL All ADV RB _ _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 5938 # text = This observation is likely to relate to the findings that TAL1 and LMO are highly synergistic in T-cell tumorigenesis in double-transgenic mice. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 observation observation NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 likely likely ADJ JJ Degree=Pos _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 relate relate VERB VB VerbForm=Inf _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 findings finding NOUN NNS Number=Plur _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 TAL1 TAL1 PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 LMO LMO PROPN NNP Number=Sing _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 highly highly ADV RB _ _ _ _ _ 16 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 tumorigenesis tumorigenesis NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 25 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5939 # text = To understand the molecular mechanisms of functional synergy between TAL1 and LMO in tumorigenesis and transcriptional regulation, we tried to identify downstream target genes regulated by TAL1 and LMO by a subtractive PCR method. 1 To to PART TO _ _ _ _ _ 2 understand understand VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 5 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 functional functional ADJ JJ Degree=Pos _ _ _ _ 8 synergy synergy NOUN NN Number=Sing _ _ _ _ 9 between between ADP IN _ _ _ _ _ 10 TAL1 tAL1 NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 LMO Lmo NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 tumorigenesis tumorigenesis NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 17 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 20 tried try VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 identify identify VERB VB VerbForm=Inf _ _ _ _ 23 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 24 target target NOUN NN Number=Sing _ _ _ _ 25 genes gene NOUN NNS Number=Plur _ _ _ _ 26 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 TAL1 TAL1 PROPN NNP Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 LMO LMO PROPN NNP Number=Sing _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 subtractive subtractive ADJ JJ Degree=Pos _ _ _ _ 34 PCR Pcr NOUN NN Number=Sing _ _ _ _ 35 method method NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 5940 # text = One of the isolated genes, that for retinaldehyde dehydrogenase 2 (RALDH2), was regularly expressed in most of the T-ALL cell lines that coexpressed TAL1 and LMO. 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 retinaldehyde retinaldehyde NOUN NN Number=Sing _ _ _ _ 10 dehydrogenase dehydrogenase NOUN NN Number=Sing _ _ _ _ 11 2 2 NUM CD NumType=Card _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 RALDH2 Raldh2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 regularly regularly ADV RB _ _ _ _ _ 18 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 most most ADJ JJS Degree=Sup _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 ALL all DET DT _ _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 lines line NOUN NNS Number=Plur _ _ _ _ 28 that that PRON WDT PronType=Rel _ _ _ _ 29 coexpressed coexpress VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 TAL1 tAL1 PROPN NNP Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 LMO LMO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 5941 # text = Exogenously transfected TAL1 and LMO, but not either alone, induced RALDH2 expression in a T-ALL cell line, HPB-ALL, not expressing endogeneous TAL1 or LMO. 1 Exogenously Exogenously ADV RB _ _ _ _ _ 2 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 TAL1 tAL1 PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 LMO LMO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 but but CCONJ CC _ _ _ _ _ 8 not not ADV RB _ _ _ _ _ 9 either either ADV RB _ _ _ _ _ 10 alone alone ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 RALDH2 Raldh2 NUM CD NumType=Card _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 T T PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 ALL All DET DT _ _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 HPB HPB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 ALL All PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 not not ADV RB _ _ _ _ _ 28 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 29 endogeneous endogeneous ADJ JJ Degree=Pos _ _ _ _ 30 TAL1 tAL1 NOUN NN Number=Sing _ _ _ _ 31 or or CCONJ CC _ _ _ _ _ 32 LMO LMO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 5942 # text = The RALDH2 transcripts in T-ALL were, however, mostly initiated within the second intron. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 RALDH2 RALDH2 NUM CD NumType=Card _ _ _ _ 3 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ALL all ADV RB _ _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 however however ADV RB _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 mostly mostly ADV RB _ _ _ _ _ 12 initiated initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 within within ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 16 intron intron NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 5943 # text = Promoter analysis revealed that a GATA site in a cryptic promoter in the second intron was essential and sufficient for the TAL1- and LMO-dependent transcriptional activation, and GATA3 binds to this site. 1 Promoter Promoter NOUN NN Number=Sing _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 GATA GATa PROPN NNP Number=Sing _ _ _ _ 7 site site NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 cryptic cryptic ADJ JJ Degree=Pos _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 15 intron intron NOUN NN Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 essential essential ADJ JJ Degree=Pos _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 TAL Tal NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 LMO Lmo PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 29 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 GATA3 GATA3 NUM CD NumType=Card _ _ _ _ 34 binds bind NOUN NNS Number=Plur _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 37 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 5944 # text = In addition, forced expression of GATA3 potentiated the induction of RALDH2 by TAL1 and LMO, and these three factors formed a complex in vivo. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 forced force VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 GATA3 GATA3 NUM CD NumType=Card _ _ _ _ 8 potentiated potentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 RALDH2 RALDH2 NUM CD NumType=Card _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 TAL1 TAL1 PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 LMO LMO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 20 three three NUM CD NumType=Card _ _ _ _ 21 factors factor NOUN NNS Number=Plur _ _ _ _ 22 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 complex complex NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 vivo. vivo. NOUN NN Number=Sing _ _ _ _ # sent_id = 5945 # text = Furthermore, a TAL1 mutant not binding to DNA also activated the transcription of RALDH2 in the presence of LMO and GATA3. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 TAL1 TAL1 NUM CD NumType=Card _ _ _ _ 5 mutant mutant NOUN NN Number=Sing _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 DNA Dna PROPN NNP Number=Sing _ _ _ _ 10 also also ADV RB _ _ _ _ _ 11 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 RALDH2 RALDH2 NUM CD NumType=Card _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 presence presence NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 LMO LMO NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 GATA3 GATA3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 5946 # text = Collectively, we have identified the RALDH2 gene as a first example of direct transcriptional target genes regulated by TAL1 and LMO in T-ALL. 1 Collectively collectively ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 RALDH2 Raldh2 NUM CD NumType=Card _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 12 example example NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 direct direct ADJ JJ Degree=Pos _ _ _ _ 15 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 16 target target NOUN NN Number=Sing _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 TAL1 TAL1 PROPN NNP Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 LMO LMO PROPN NNP Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ALL all ADV RB _ _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5947 # text = In this case, TAL1 and LMO act as cofactors for GATA3 to activate the transcription of RALDH2. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 case case NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 TAL1 TAL1 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 LMO Lmo NOUN NN Number=Sing _ _ _ _ 8 act act NOUN NN Number=Sing _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 cofactors cofactor NOUN NNS Number=Plur _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 GATA3 GATA3 NOUN NN Number=Sing _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 activate activate VERB VB VerbForm=Inf _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 RALDH2 Raldh2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5948 # text = Document 003001534 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001534 003001534 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5949 # text = Posttranscriptional regulation of macrophage tissue factor expression by antioxidants. 1 Posttranscriptional Posttranscriptional ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 5 tissue tissue NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5950 # text = Tissue factor (TF) expression by cells of monocyte/macrophage lineage represents an important mechanism underlying the initiation of fibrin deposition at sites of extravascular inflammation. 1 Tissue Tissue NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 TF TF NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 13 lineage lineage NOUN NN Number=Sing _ _ _ _ 14 represents represent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 important important ADJ JJ Degree=Pos _ _ _ _ 17 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 18 underlying underly VERB VBG VerbForm=Ger _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 initiation initiation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 fibrin fibrin NOUN NN Number=Sing _ _ _ _ 23 deposition deposition NOUN NN Number=Sing _ _ _ _ 24 at at ADP IN _ _ _ _ _ 25 sites site NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 extravascular extravascular ADJ JJ Degree=Pos _ _ _ _ 28 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5951 # text = Recent evidence suggests a role for oxidant stress in the signalling pathway of various cell types by virtue of its ability to induce DNA binding of various transcription factors, including nuclear factor kappa B and AP-1. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 evidence evidence NOUN NN Number=Sing _ _ _ _ 3 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 oxidant oxidant ADJ JJ Degree=Pos _ _ _ _ 8 stress stress NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 signalling signall NOUN NN Number=Sing _ _ _ _ 12 pathway pathway NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 various various ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 types type NOUN NNS Number=Plur _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 virtue virtue NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 ability ability NOUN NN Number=Sing _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 induce induce VERB VB VerbForm=Inf _ _ _ _ 24 DNA dna NOUN NN Number=Sing _ _ _ _ 25 binding binding VERB VBG VerbForm=Ger _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 various various ADJ JJ Degree=Pos _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 including include VERB VBG VerbForm=Ger _ _ _ _ 32 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 33 factor factor NOUN NN Number=Sing _ _ _ _ 34 kappa kappa NOUN NN Number=Sing _ _ _ _ 35 B b NOUN NN Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 5952 # text = The effect of antioxidant treatment on lipopolysaccharide (LPS)-induced TF expression was examined in murine peritoneal macrophages and human monocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 antioxidant antioxidant ADJ JJ Degree=Pos _ _ _ _ 5 treatment treatment NOUN NN Number=Sing _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 - - PUNCT : _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 TF Tf NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 murine murine PRON PRP _ _ _ _ _ 19 peritoneal peritoneal ADJ JJ Degree=Pos _ _ _ _ 20 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5953 # text = Both pyrrolidine dithiocarbamate, an oxidant scavenger, and N-acetyl-cysteine, a precursor of the endogenous antioxidant glutathione, inhibited stimulation of macrophage procoagulant activity by LPS. 1 Both both DET DT _ _ _ _ _ 2 pyrrolidine pyrrolidine NOUN NN Number=Sing _ _ _ _ 3 dithiocarbamate dithiocarbamate NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 oxidant oxidant ADJ JJ Degree=Pos _ _ _ _ 7 scavenger scavenger NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 N- N- SYM NFP _ _ _ _ SpaceAfter=No 11 acetyl acetyl ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 cysteine cysteine NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 precursor precursor NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 20 antioxidant antioxidant ADJ JJ Degree=Pos _ _ _ _ 21 glutathione glutathione NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 27 procoagulant procoagulant NOUN NN Number=Sing _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 5954 # text = Northern blot analysis showed that neither of these agents reduced LPS-stimulated TF mRNA accumulation, thereby suggesting a posttranscriptional mechanism for the effect. 1 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 neither neither DET DT _ _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 9 agents agent NOUN NNS Number=Plur _ _ _ _ 10 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 LPS Lp NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 TF TF PROPN NNP Number=Sing _ _ _ _ 15 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 16 accumulation accumulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 thereby thereby ADV RB _ _ _ _ _ 19 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 posttranscriptional posttranscriptional ADJ JJ Degree=Pos _ _ _ _ 22 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5955 # text = Immunofluorescence studies of human monocytes using polyclonal anti-TF antibody showed that N-acetyl-cysteine treatment prevented the characteristic plasmalemmal localization of TF antigen that occurs in response to LPS. 1 Immunofluorescence Immunofluorescence NOUN NN Number=Sing _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 6 using use VERB VBG VerbForm=Ger _ _ _ _ 7 polyclonal polyclonal ADJ JJ Degree=Pos _ _ _ _ 8 anti anti X AFX _ _ _ _ SpaceAfter=No 9 -TF -tf PROPN NNP Number=Sing _ _ _ _ 10 antibody antibody PRON NN Number=Sing _ _ _ _ 11 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 13 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 acetyl acetyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 17 treatment treatment NOUN NN Number=Sing _ _ _ _ 18 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 characteristic characteristic ADJ JJ Degree=Pos _ _ _ _ 21 plasmalemmal plasmalemmal NOUN NN Number=Sing _ _ _ _ 22 localization localization NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 TF TF PROPN NNP Number=Sing _ _ _ _ 25 antigen antigen VERB VB VerbForm=Inf _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 occurs occur NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 response response NOUN NN Number=Sing _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 5956 # text = Western blot analysis showed that N-acetyl-cysteine reduced the accumulation of the 47-kD mature glycoprotein in LPS-treated cells, a finding consistent with the results of the immunofluorescence studies. 1 Western western ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 acetyl acetyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 10 reduced reduce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 47 47 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kD kd NOUN NN Number=Sing _ _ _ _ 18 mature mature NOUN NN Number=Sing _ _ _ _ 19 glycoprotein glycoprotein NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 finding finding NOUN NN Number=Sing _ _ _ _ 28 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 results result NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 immunofluorescence immunofluorescence NOUN NN Number=Sing _ _ _ _ 35 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 5957 # text = Furthermore, these conditions did not result in an accumulation of the less mature forms of TF. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 conditions condition NOUN NNS Number=Plur _ _ _ _ 5 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 result result VERB VB VerbForm=Inf _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 less less ADV RBS _ _ _ _ _ 14 mature mature ADJ JJ Degree=Pos _ _ _ _ 15 forms form NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 TF TF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 5958 # text = When considered together, these data suggest that antioxidants exert their effects by impairing translation and/or by causing degradation of newly translated protein. 1 When when ADV WRB PronType=Int _ _ _ _ 2 considered consider VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 together together ADV RB _ _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 data data NOUN NN Number=Sing _ _ _ _ 7 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ _ 10 exert exert VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 12 effects effect NOUN NNS Number=Plur _ _ _ _ 13 by by SCONJ IN _ _ _ _ _ 14 impairing impair VERB VBG VerbForm=Ger _ _ _ _ 15 translation translation NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 or or CCONJ CC _ _ _ _ _ 19 by by SCONJ IN _ _ _ _ _ 20 causing cause VERB VBG VerbForm=Ger _ _ _ _ 21 degradation degradation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 newly newly ADV RB _ _ _ _ _ 24 translated translate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 5959 # text = The effect of antioxidants on tumor necrosis factor appeared to be species specific, with no effect on LPS-induced tumor necrosis factor in murine cells, but with inhibition in human monocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 tumor tumor NOUN NN Number=Sing _ _ _ _ 7 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 species species NOUN NNS Number=Plur _ _ _ _ 13 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 no no DET DT _ _ _ _ _ 17 effect effect NOUN NN Number=Sing _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 tumor tumor NOUN NN Number=Sing _ _ _ _ 23 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 murine murine ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 but but CCONJ CC _ _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 human human ADJ JJ Degree=Pos _ _ _ _ 34 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 5960 # text = The posttranscriptional effect of antioxidants on TF expression data suggests a novel mechanism whereby these agents might modulate monocyte/macrophage activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 posttranscriptional posttranscriptional ADJ JJ Degree=Pos _ _ _ _ 3 effect effect NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 TF Tf NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 data data NOUN NN Number=Sing _ _ _ _ 10 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 novel novel NOUN NN Number=Sing _ _ _ _ 13 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 14 whereby whereby SCONJ IN _ _ _ _ _ 15 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 16 agents agent NOUN NNS Number=Plur _ _ _ _ 17 might might AUX MD VerbForm=Fin _ _ _ _ 18 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 19 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5961 # text = Document 003001535 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001535 003001535 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5962 # text = Natural variants of the HIV-1 long terminal repeat: analysis of promoters with duplicated DNA regulatory motifs. 1 Natural Natural ADJ JJ Degree=Pos _ _ _ _ 2 variants variant NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 long long ADJ JJ Degree=Pos _ _ _ _ 9 terminal terminal NOUN NN Number=Sing _ _ _ _ 10 repeat repeat NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 : : PUNCT : _ _ _ _ _ 12 analysis analysis NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 promoters promoter NOUN NNS Number=Plur _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 duplicated duplicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 DNA dna NOUN NN Number=Sing _ _ _ _ 18 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 19 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5963 # text = Sequence variation in the long terminal repeat (LTR) region of HIV-1 was analyzed in viral isolates of 17 infected individuals. 1 Sequence sequence NOUN NN Number=Sing _ _ _ _ 2 variation variation NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 long long ADJ JJ Degree=Pos _ _ _ _ 6 terminal terminal NOUN NN Number=Sing _ _ _ _ 7 repeat repeat NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 region region NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 viral viral ADJ JJ Degree=Pos _ _ _ _ 20 isolates isolate NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 17 17 NUM CD NumType=Card _ _ _ _ 23 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5964 # text = Two classes of LTR size variants were found. 1 Two two NUM CD NumType=Card _ _ _ _ 2 classes class NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 LTR Ltr ADJ JJ Degree=Pos _ _ _ _ 5 size size NOUN NN Number=Sing _ _ _ _ 6 variants variant NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 5965 # text = One HIV-1 variant was detected containing an additional binding site for the transcription factor Sp1. 1 One one NUM CD NumType=Card _ _ _ _ 2 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - SYM SYM _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 variant variant NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 containing contain VERB VBG VerbForm=Ger _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 additional additional ADJ JJ Degree=Pos _ _ _ _ 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 Sp1 sp1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 5966 # text = Another LTR size variation was observed in four patients in a region just upstream of the NF-kappa B enhancer. 1 Another another DET DT _ _ _ _ _ 2 LTR Ltr NOUN NN Number=Sing _ _ _ _ 3 size size NOUN NN Number=Sing _ _ _ _ 4 variation variation NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 four four NUM CD NumType=Card _ _ _ _ 9 patients patient NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 region region NOUN NN Number=Sing _ _ _ _ 13 just just ADV RB _ _ _ _ _ 14 upstream upstream NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5967 # text = This variation was the result of a duplication of a short DNA sequence (CTG-motif). 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 variation variation NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 result result NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 duplication duplication NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 short short ADJ JJ Degree=Pos _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 sequence sequence NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 CTG-motif CTG-motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 5968 # text = Cell culture experiments demonstrated that the natural variant with four Sp1 sites had a slightly higher promoter activity and viral replication rate than the isogenic control LTR with three Sp1 sites. 1 Cell cell NOUN NN Number=Sing _ _ _ _ 2 culture culture NOUN NN Number=Sing _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ _ 4 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 natural natural ADJ JJ Degree=Pos _ _ _ _ 8 variant variant NOUN NN Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 four four NUM CD NumType=Card _ _ _ _ 11 Sp1 sp1 NUM CD NumType=Card _ _ _ _ 12 sites site NOUN NNS Number=Plur _ _ _ _ 13 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 slightly slightly ADV RB _ _ _ _ _ 16 higher higher ADJ JJR Degree=Cmp _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 viral viral ADJ JJ Degree=Pos _ _ _ _ 21 replication replication NOUN NN Number=Sing _ _ _ _ 22 rate rate NOUN NN Number=Sing _ _ _ _ 23 than than ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 isogenic isogenic ADJ JJ Degree=Pos _ _ _ _ 26 control control NOUN NN Number=Sing _ _ _ _ 27 LTR Ltr NOUN NN Number=Sing _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 three three NUM CD NumType=Card _ _ _ _ 30 Sp1 sp1 NUM CD NumType=Card _ _ _ _ 31 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 5969 # text = No positive effect of the duplicated CTG-motif could be detected. 1 No no DET DT _ _ _ _ _ 2 positive positive ADJ JJ Degree=Pos _ _ _ _ 3 effect effect NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 duplicated duplicate ADJ JJ Degree=Pos _ _ _ _ 7 CTG- Ctg- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 motif motif NOUN NN Number=Sing _ _ _ _ 9 could could AUX MD VerbForm=Fin _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 5970 # text = In order to measure small differences in virus production more accurately, equal amounts of a size variant and the wild-type plasmid were cotransfected into T-cells. 1 In in ADP IN _ _ _ _ _ 2 order order NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 measure measure VERB VB VerbForm=Inf _ _ _ _ 5 small small ADJ JJ Degree=Pos _ _ _ _ 6 differences difference NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 virus virus NOUN NN Number=Sing _ _ _ _ 9 production production NOUN NN Number=Sing _ _ _ _ 10 more more ADV RBR _ _ _ _ _ 11 accurately accurately ADV RB _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 equal equal ADJ JJ Degree=Pos _ _ _ _ 14 amounts amount NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 size size NOUN NN Number=Sing _ _ _ _ 18 variant variant NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 type type NOUN NN Number=Sing _ _ _ _ 24 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 25 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 cotransfected cotransfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 into into ADP IN _ _ _ _ _ 28 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 5971 # text = The virus with four Sp1 sites did outgrow the three Sp1 virus in 35 days of culture and CTG-monomer virus outcompeted the CTG-dimer virus in 42 days. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 virus virus NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 four four NUM CD NumType=Card _ _ _ _ 5 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 6 sites site NOUN NNS Number=Plur _ _ _ _ 7 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 outgrow outgrow VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 three three NUM CD NumType=Card _ _ _ _ 11 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 12 virus virus NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 35 35 NUM CD NumType=Card _ _ _ _ 15 days day NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 culture culture NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 CTG-monomer CTG-monomer NOUN NN Number=Sing _ _ _ _ 20 virus virus NOUN NN Number=Sing _ _ _ _ 21 outcompeted outcompete VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 CTG- Ctg- NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 dimer dimer NOUN NN Number=Sing _ _ _ _ 25 virus virus NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 42 42 NUM CD NumType=Card _ _ _ _ 28 days day NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 5972 # text = Based on these results we estimate a 5-10% difference in virus production of the LTR variants when compared to that of wild-type. 1 Based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 on on ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 estimate estimate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - SYM SYM _ _ _ _ SpaceAfter=No 10 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 % % SYM NN Number=Sing _ _ _ _ 12 difference difference NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 virus virus NOUN NN Number=Sing _ _ _ _ 15 production production NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 LTR LTR PROPN NNP Number=Sing _ _ _ _ 19 variants variant NOUN NNS Number=Plur _ _ _ _ 20 when when ADV WRB PronType=Int _ _ _ _ 21 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5973 # text = Document 003001537 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001537 003001537 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5974 # text = Human immunodeficiency virus type 1 Nef protein down-regulates transcription factors NF-kappa B and AP-1 in human T cells in vitro after T-cell receptor stimulation. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 3 virus virus NOUN NN Number=Sing _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ _ 5 1 1 NUM CD NumType=Card _ _ _ _ 6 Nef Nef NOUN NN Number=Sing _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 down down ADV RB _ _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 regulates regulate VERB NNS Number=Plur _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 vitro vitro NOUN NN Number=Sing _ _ _ _ 27 after after ADP IN _ _ _ _ _ 28 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 receptor receptor NOUN NN Number=Sing _ _ _ _ 31 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5975 # text = Human immunodeficiency virus type 1 (HIV-1) negative factor (Nef) has been shown to down-regulate the transcription factors NF-kappa B and AP-1 in vitro. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 3 virus virus NOUN NN Number=Sing _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ _ 5 1 1 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 X LS _ _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 negative negative ADJ JJ Degree=Pos _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 Nef Nef PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 18 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 down down ADV RB _ _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 factors factor NOUN NNS Number=Plur _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 5976 # text = To define the mechanism of action of the Nef protein, the signal transduction pathways which may be affected in T cells by constitutive expression of the nef gene were examined. 1 To to PART TO _ _ _ _ _ 2 define define VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 action action NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 Nef Nef PROPN NNP Number=Sing _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 signal signal ADJ JJ Degree=Pos _ _ _ _ 14 transduction transduction NOUN NN Number=Sing _ _ _ _ 15 pathways pathway NOUN NNS Number=Plur _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 may may AUX MD VerbForm=Fin _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 nef nef NOUN NN Number=Sing _ _ _ _ 29 gene gene NOUN NN Number=Sing _ _ _ _ 30 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 5977 # text = Stimulation of T cells with tumor necrosis factor, interleukin-1, or lipopolysaccharide resulted in the recruitment of transcriptional factors to a similar level whether or not the cells expressed the nef gene. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 tumor tumor NOUN NN Number=Sing _ _ _ _ 7 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 16 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 similar similar ADJ JJ Degree=Pos _ _ _ _ 26 level level NOUN NN Number=Sing _ _ _ _ 27 whether whether SCONJ IN _ _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 not not ADV RB _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 expressed express VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 nef nef ADJ JJ Degree=Pos _ _ _ _ 35 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 5978 # text = On the other hand, stimulation of T cells by mitogens or antibodies to the T-cell receptor (TCR)-CD3 complex resulted in the down-regulation of transcriptional factors NF-kappa B and AP-1 in cells expressing the nef gene compared with cells not expressing the nef gene. 1 On on ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 hand hand NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 mitogens mitogen NOUN NNS Number=Plur _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 receptor receptor NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 TCR TCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 - - PUNCT : _ _ _ _ SpaceAfter=No 23 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 24 complex complex NOUN NN Number=Sing _ _ _ _ 25 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 down down NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 regulation regulation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 33 factors factor NOUN NNS Number=Plur _ _ _ _ 34 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 kappa kappa NOUN NN Number=Sing _ _ _ _ 37 B b NOUN NN Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 1 1 NUM CD NumType=Card _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ _ 44 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 nef nef NOUN NN Number=Sing _ _ _ _ 47 gene gene NOUN NN Number=Sing _ _ _ _ 48 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 49 with with ADP IN _ _ _ _ _ 50 cells cell NOUN NNS Number=Plur _ _ _ _ 51 not not ADV RB _ _ _ _ _ 52 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 53 the the DET DT Definite=Def|PronType=Art _ _ _ _ 54 nef nef NOUN NN Number=Sing _ _ _ _ 55 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 5979 # text = Because the Nef protein does not affect the surface expression of the CD3-TCR complex, we conclude that the Nef protein down-regulates the transcriptional factors NF-kappa B and AP-1 in T cells in vitro through an effect on the TCR-dependent signal transduction pathway. 1 Because because SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 Nef Nef PROPN NNP Number=Sing _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 affect affect VERB VB VerbForm=Inf _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 surface surface NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 TCR Tcr NOUN NN Number=Sing _ _ _ _ 16 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 19 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 Nef Nef PROPN NNP Number=Sing _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ _ 24 down down ADV RB _ _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 29 factors factor NOUN NNS Number=Plur _ _ _ _ 30 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappa kappa NOUN NN Number=Sing _ _ _ _ 33 B b NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 T t PROPN NNP Number=Sing _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 vitro vitro NOUN NN Number=Sing _ _ _ _ 43 through through ADP IN _ _ _ _ _ 44 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 45 effect effect NOUN NN Number=Sing _ _ _ _ 46 on on ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 TCR Tcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 51 signal signal NOUN NN Number=Sing _ _ _ _ 52 transduction transduction NOUN NN Number=Sing _ _ _ _ 53 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5980 # text = Document 003001539 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001539 003001539 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5981 # text = Involvement of cyclic AMP-dependent protein kinases in the signal transduction pathway for interleukin-1. 1 Involvement involvement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cyclic cyclic ADJ JJ Degree=Pos _ _ _ _ 4 AMP AMP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 kinases kinase NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 signal signal NOUN NN Number=Sing _ _ _ _ 12 transduction transduction NOUN NN Number=Sing _ _ _ _ 13 pathway pathway NOUN NN Number=Sing _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5982 # text = Expression of a highly specific protein inhibitor for cyclic AMP-dependent protein kinases in interleukin-1 (IL-1)-responsive cells blocked IL-1-induced gene transcription that was driven by the kappa immunoglobulin enhancer or the human immunodeficiency virus long terminal repeat. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 highly highly ADV RB _ _ _ _ _ 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 cyclic cyclic ADJ JJ Degree=Pos _ _ _ _ 10 AMP Amp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 kinases kinase NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ _ 35 that that PRON WDT PronType=Rel _ _ _ _ 36 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 37 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 by by ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 kappa kappa NOUN NN Number=Sing _ _ _ _ 41 immunoglobulin immunoglobulin ADP IN _ _ _ _ _ 42 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 43 or or CCONJ CC _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 human human ADJ JJ Degree=Pos _ _ _ _ 46 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 47 virus virus NOUN NN Number=Sing _ _ _ _ 48 long long ADV RB Degree=Pos _ _ _ _ 49 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 50 repeat repeat NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 5983 # text = This inhibitor did not affect protein kinase C-mediated gene transcription, suggesting that cyclic AMP-dependent protein kinases are involved in the signal transduction pathway for IL-1 in a number of responsive cell types. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 3 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 affect affect VERB VB VerbForm=Inf _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 C- C- PUNCT : _ _ _ _ SpaceAfter=No 9 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 cyclic cyclic PROPN NNP Number=Sing _ _ _ _ 16 AMP Amp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 kinases kinase NOUN NNS Number=Plur _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 involved involved ADJ JJ Degree=Pos _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 signal signal NOUN NN Number=Sing _ _ _ _ 26 transduction transduction NOUN NN Number=Sing _ _ _ _ 27 pathway pathway NOUN NN Number=Sing _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 number number NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5984 # text = Document 003001540 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001540 003001540 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5985 # text = Interleukin-10 inhibits expression of both interferon alpha- and interferon gamma- induced genes by suppressing tyrosine phosphorylation of STAT1. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 both both DET DT _ _ _ _ _ 8 interferon interferon NOUN NN Number=Sing _ _ _ _ 9 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 interferon interferon ADP IN _ _ _ _ _ 13 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ _ 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 genes gene NOUN NNS Number=Plur _ _ _ _ 17 by by SCONJ IN _ _ _ _ _ 18 suppressing suppresse VERB VBG VerbForm=Ger _ _ _ _ 19 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 20 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 STAT1 stat1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5986 # text = Interleukin-10 (IL-10) helps maintain polarized T-helper cells in a T-helper lymphocyte 2 (Th2) phenotype. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 helps help VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 maintain maintain VERB VB VerbForm=Inf _ _ _ _ 11 polarized polarize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 helper helper NOUN NN Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 helper helper NOUN NN Number=Sing _ _ _ _ 19 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 20 2 2 NUM CD NumType=Card _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 Th2 Th2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 phenotype phenotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 5987 # text = Part of this process involves the prevention of the development of Th1 cells, which are a primary source of interferon gamma (IFNgamma), a potent activator of monocytes and an inhibitor of Th2 proliferation. 1 Part part NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 process process NOUN NN Number=Sing _ _ _ _ 5 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 prevention prevention NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 development development NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 Th1 Th1 NUM CD NumType=Card _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 primary primary ADJ JJ Degree=Pos _ _ _ _ 19 source source NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 interferon interferon NOUN NN Number=Sing _ _ _ _ 22 gamma gamma NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 IFNgamma IFNgamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 potent potent NOUN NN Number=Sing _ _ _ _ 29 activator activator NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 Th2 Th2 NUM CD NumType=Card _ _ _ _ 37 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 5988 # text = Because monocytes and macrophages are important mediators of Th1-type responses, such as delayed-type hypersensitivity, we sought to determine if IL-10 could directly mediate inhibition of IFNgamma- and IFNalpha-induced gene expression in these cells. 1 Because because SCONJ IN _ _ _ _ _ 2 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 important important ADJ JJ Degree=Pos _ _ _ _ 7 mediators mediator NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 Th1 Th1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 type type NOUN NN Number=Sing _ _ _ _ 12 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 such such ADJ JJ Degree=Pos _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 delayed delayed ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 type type NOUN NN Number=Sing _ _ _ _ 19 hypersensitivity hypersensitivity NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 22 sought seek VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 determine determine VERB VB VerbForm=Inf _ _ _ _ 25 if if SCONJ IN _ _ _ _ _ 26 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - SYM SYM _ _ _ _ SpaceAfter=No 28 10 10 NUM CD NumType=Card _ _ _ _ 29 could could AUX MD VerbForm=Fin _ _ _ _ 30 directly directly ADV RB _ _ _ _ _ 31 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 32 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 IFNgamma IFNgamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 IFNalpha IFNalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 gene gene NOUN NN Number=Sing _ _ _ _ 41 expression expression NOUN NN Number=Sing _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 5989 # text = Highly purified monocytes were incubated with IL-10 for 60 to 90 minutes before the addition of IFNgamma or IFNalpha. 1 Highly highly ADV RB _ _ _ _ _ 2 purified purified ADJ JJ Degree=Pos _ _ _ _ 3 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 incubated incubate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 10 10 NUM CD NumType=Card _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 60 60 NUM CD NumType=Card _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 90 90 NUM CD NumType=Card _ _ _ _ 14 minutes minute NOUN NNS Number=Plur _ _ _ _ 15 before before ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 addition addition NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 IFNgamma IFNgamma PROPN NNP Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 IFNalpha IFNalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 5990 # text = IL-10 preincubation resulted in the inhibition of gene expression for several IFN-induced genes, such as IP-10, ISG54, and intercellular adhesion molecule-1. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 preincubation preincubation NOUN NN Number=Sing _ _ _ _ 5 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 several several ADJ JJ Degree=Pos _ _ _ _ 14 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 such such ADJ JJ Degree=Pos _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 IP IP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 ISG54 ISG54 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 intercellular intercellular ADJ JJ Degree=Pos _ _ _ _ 29 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 30 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 5991 # text = The reduction in gene expression resulted from the ability of IL-10 to suppress IFN-induced assembly of signal transducer and activator of transcription (STAT) factors to specific promoter motifs on IFNalpha- and IFNgamma-inducible genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 reduction reduction NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 gene gene ADJ JJ Degree=Pos _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 ability ability NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 10 10 NUM CD NumType=Card _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 suppress suppress PROPN NNP Number=Sing _ _ _ _ 16 IFN Ifn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 assembly assembly NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 signal signal NOUN NN Number=Sing _ _ _ _ 22 transducer transducer NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 activator activator NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 STAT Stat NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 factors factor NOUN NNS Number=Plur _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 specific specific ADJ JJ Degree=Pos _ _ _ _ 33 promoter promoter NOUN NN Number=Sing _ _ _ _ 34 motifs motif NOUN NNS Number=Plur _ _ _ _ 35 on on ADP IN _ _ _ _ _ 36 IFNalpha IFNalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT , _ _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 IFNgamma IFNgamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 42 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 5992 # text = This was accomplished by preventing the IFN-induced tyrosine phosphorylation of STAT1, a component of both IFNalpha- and IFNgamma-induced DNA binding complexes. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 accomplished accomplish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 by by SCONJ IN _ _ _ _ _ 5 preventing prevent VERB VBG VerbForm=Ger _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 11 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 STAT1 STAT1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 component component NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 both both CCONJ CC _ _ _ _ _ 19 IFNalpha IFNalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 IFNgamma IFNgamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 DNA dna NOUN NN Number=Sing _ _ _ _ 26 binding binding VERB VBG VerbForm=Ger _ _ _ _ 27 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 5993 # text = Therefore, IL-10 can directly inhibit STAT-dependent early response gene expression induced by both IFNalpha and IFNgamma in monocytes by suppressing the tyrosine phosphorylation of STAT1. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 10 10 NUM CD NumType=Card _ _ _ _ 6 can can AUX MD VerbForm=Fin _ _ _ _ 7 directly directly ADV RB _ _ _ _ _ 8 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 9 STAT Stat ADV RB _ _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 early early ADJ JJ Degree=Pos _ _ _ _ 13 response response NOUN NN Number=Sing _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 both both CCONJ CC _ _ _ _ _ 19 IFNalpha IFNalpha PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 IFNgamma IFNgamma PROPN NNP Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 24 by by SCONJ IN _ _ _ _ _ 25 suppressing suppresse VERB VBG VerbForm=Ger _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 28 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 STAT1 stat1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 5994 # text = This may occur through the ability of IL-10 to induce expression of the gene, suppressor of cytokine signaling 3 (SOCS3). 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 may may AUX MD VerbForm=Fin _ _ _ _ 3 occur occur VERB VB VerbForm=Inf _ _ _ _ 4 through through ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 ability ability NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 10 10 NUM CD NumType=Card _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 induce induce VERB VB VerbForm=Inf _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 suppressor suppressor NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 21 signaling signaling NOUN NN Number=Sing _ _ _ _ 22 3 3 NUM CD NumType=Card _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 SOCS3 SOCS3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 5995 # text = Document 003001542 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001542 003001542 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 5996 # text = Okadaic acid is a potent inducer of AP-1, NF-kappa B, and tumor necrosis factor-alpha in human B lymphocytes. 1 Okadaic Okadaic ADJ JJ Degree=Pos _ _ _ _ 2 acid acid NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 potent potent NOUN NN Number=Sing _ _ _ _ 6 inducer inducer NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 tumor tumor NOUN NN Number=Sing _ _ _ _ 19 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 alpha alpha NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ _ 26 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 5997 # text = Treatment of human B lymphocytes with an optimal concentration of okadaic acid, an inhibitor of phosphatases 1 and 2A, resulted in the induction of the transcription factor, AP-1 and a marked increase in NF-kappa B levels. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 9 concentration concentration NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 12 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ _ 18 1 1 NUM CD NumType=Card _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 2A 2a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 induction induction NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 increase increase NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 kappa kappa NOUN NN Number=Sing _ _ _ _ 42 B b NOUN NN Number=Sing _ _ _ _ 43 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 5998 # text = In contrast, no effect on the levels of the octamer binding proteins, Oct-1 or Oct-2, were found. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 no no DET DT _ _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 octamer octamer NOUN NN Number=Sing _ _ _ _ 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 -2 -2 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 5999 # text = Since both AP-1 and NF-kappa B have been reported to be important in the induction of the tumor necrosis factor-alpha (TNF-alpha) gene we examined the effects of okadaic acid on TNF-alpha mRNA levels. 1 Since since ADP IN _ _ _ _ _ 2 both both DET DT _ _ _ _ _ 3 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 13 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 important important ADJ JJ Degree=Pos _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 induction induction NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 tumor tumor NOUN NN Number=Sing _ _ _ _ 23 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 alpha alpha NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 gene gene NOUN NN Number=Sing _ _ _ _ 33 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 34 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 effects effect NOUN NNS Number=Plur _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 39 acid acid NOUN NN Number=Sing _ _ _ _ 40 on on ADP IN _ _ _ _ _ 41 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 alpha alpha NOUN NN Number=Sing _ _ _ _ 44 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 45 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 6000 # text = Treatment with okadaic acid resulted in a striking increase in TNF-alpha mRNA transcripts within 1 h of stimulation and large amounts of TNF-alpha were released into the culture media. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 4 acid acid NOUN NN Number=Sing _ _ _ _ 5 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 striking striking NOUN NN Number=Sing _ _ _ _ 9 increase increase NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 15 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 16 within within ADP IN _ _ _ _ _ 17 1 1 NUM CD NumType=Card _ _ _ _ 18 h h NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 large large ADJ JJ Degree=Pos _ _ _ _ 23 amounts amount NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 alpha alpha NOUN NN Number=Sing _ _ _ _ 28 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 released release VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 into into ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 culture culture NOUN NN Number=Sing _ _ _ _ 33 media media NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 6001 # text = Although okadaic acid provides a potent inductive signal for AP-1 and NF-kappa B it did not induce either B cell proliferation or immunoglobulin secretion. 1 Although although SCONJ IN _ _ _ _ _ 2 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 3 acid acid NOUN NN Number=Sing _ _ _ _ 4 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 potent potent NOUN NN Number=Sing _ _ _ _ 7 inductive inductive ADJ JJ Degree=Pos _ _ _ _ 8 signal signal NOUN NN Number=Sing _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 19 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 induce induce VERB VB VerbForm=Inf _ _ _ _ 22 either either CCONJ CC _ _ _ _ _ 23 B b ADJ JJ Degree=Pos _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 28 secretion secretion NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6002 # text = Document 003001543 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001543 003001543 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6003 # text = Long-term inositol phosphate release, but not tyrosine kinase activity, correlates with IL-2 secretion and NF-AT induction in anti-CD3-activated peripheral human T lymphocytes. 1 Long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 term term NOUN NN Number=Sing _ _ _ _ 4 inositol inositol NOUN NN Number=Sing _ _ _ _ 5 phosphate phosphate NOUN NN Number=Sing _ _ _ _ 6 release release NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 but but CCONJ CC _ _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 tyrosine tyrosine VERB VB VerbForm=Inf _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 secretion secretion NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 AT at NOUN NN Number=Sing _ _ _ _ 24 induction induction NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 -activated -activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 T t PROPN NNP Number=Sing _ _ _ _ 31 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6004 # text = The cascade of events within the first few minutes of T cell stimulation has been well characterized. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cascade cascade NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 events event NOUN NNS Number=Plur _ _ _ _ 5 within within ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 8 few few ADJ JJ Degree=Pos _ _ _ _ 9 minutes minute NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 14 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 16 well well ADV RB Degree=Pos _ _ _ _ 17 characterized characterize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 6005 # text = Although many second messengers have been shown to be necessary and sufficient for T cell activation in a number of model systems, the rate-limiting step in peripheral T cells has not been demonstrated. 1 Although although SCONJ IN _ _ _ _ _ 2 many many ADJ JJ Degree=Pos _ _ _ _ 3 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 4 messengers messenger NOUN NNS Number=Plur _ _ _ _ 5 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 7 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 T t NUM CD NumType=Card _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 number number NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 model model NOUN NN Number=Sing _ _ _ _ 22 systems system NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 rate rate NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 limiting limiting NOUN NN Number=Sing _ _ _ _ 28 step step NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 not not PART RB _ _ _ _ _ 35 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 36 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 6006 # text = To model effective versus ineffective CD3-mediated stimulation in peripheral T cells, we used two anti-CD3 mAbs that differ in their ability to stimulate purified T cells: OKT3, which causes early second messenger generation but is unable to activate T cells without a second signal, and 64.1, which stimulates T cell proliferation on its own. 1 To to PART TO _ _ _ _ _ 2 model model VERB VB VerbForm=Inf _ _ _ _ 3 effective effective ADJ JJ Degree=Pos _ _ _ _ 4 versus versus CCONJ CC _ _ _ _ _ 5 ineffective ineffective ADJ JJ Degree=Pos _ _ _ _ 6 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 12 T T PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 16 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 two two NUM CD NumType=Card _ _ _ _ 18 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 19 mAbs mAb NOUN NNS Number=Plur _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 differ differ VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 ability ability NOUN NN Number=Sing _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 27 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 : : PUNCT : _ _ _ _ _ 31 OKT3 OKT3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 which which PRON WDT PronType=Rel _ _ _ _ 34 causes caus VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 early early ADJ JJ Degree=Pos _ _ _ _ 36 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 37 messenger messenger NOUN NN Number=Sing _ _ _ _ 38 generation generation NOUN NN Number=Sing _ _ _ _ 39 but but CCONJ CC _ _ _ _ _ 40 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 41 unable unable ADJ JJ Degree=Pos _ _ _ _ 42 to to PART TO _ _ _ _ _ 43 activate activate VERB VB VerbForm=Inf _ _ _ _ 44 T t PROPN NNP Number=Sing _ _ _ _ 45 cells cell NOUN NNS Number=Plur _ _ _ _ 46 without without ADP IN _ _ _ _ _ 47 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 48 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 49 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 , , PUNCT , _ _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 64.1 64.1 NUM CD NumType=Card _ _ _ SpaceAfter=No 53 , , PUNCT , _ _ _ _ _ 54 which which PRON WDT PronType=Rel _ _ _ _ 55 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 56 T t NUM CD NumType=Card _ _ _ _ 57 cell cell NOUN NN Number=Sing _ _ _ _ 58 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 59 on on ADP IN _ _ _ _ _ 60 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 61 own own ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 62 . . PUNCT . _ _ _ _ _ # sent_id = 6007 # text = We found that tyrosine kinase activity was similar for both mAbs over a period of hours. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 tyrosine tyrosine ADJ JJ Degree=Pos _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 similar similar ADJ JJ Degree=Pos _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 both both DET DT _ _ _ _ _ 11 mAbs mAbs NOUN NNS Number=Plur _ _ _ _ 12 over over ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 period period NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 6008 # text = However, the inositol phosphate response was stronger for 64.1 than for OKT3. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 inositol inositol ADJ JJ Degree=Pos _ _ _ _ 5 phosphate phosphate NOUN NN Number=Sing _ _ _ _ 6 response response NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 stronger stronger ADJ JJR Degree=Cmp _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 64.1 64.1 NUM CD NumType=Card _ _ _ _ 11 than than ADP IN _ _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 OKT3 OKT3 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 6009 # text = To tie these events to gene activation, we measured NF-kappa B and NF-AT activity in the nucleus after anti-CD3 stimulation. 1 To to PART TO _ _ _ _ _ 2 tie tie VERB VB VerbForm=Inf _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 events event NOUN NNS Number=Plur _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 gene gene VERB VB VerbForm=Inf _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 10 measured measure VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ 14 B b PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 AT at ADJ JJ Degree=Pos _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 23 after after ADP IN _ _ _ _ _ 24 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 25 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 6010 # text = Both stimuli induced the appearance of the NF-kappa B components (c-Rel, p65 (RelA), and p50 (NF-kappa B1)) and NF-kappa B DNA binding activity in the nucleus. 1 Both both DET DT _ _ _ _ _ 2 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 3 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 appearance appearance NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 components component NOUN NNS Number=Plur _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 p65 p65 NUM CD NumType=Card _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 RelA RelA NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 p50 p50 NUM CD NumType=Card _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B1 B1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 kappa kappa NOUN NN Number=Sing _ _ _ _ 36 B b NOUN NN Number=Sing _ _ _ _ 37 DNA dna NOUN NN Number=Sing _ _ _ _ 38 binding binde VERB VBG VerbForm=Ger _ _ _ _ 39 activity activity NOUN NN Number=Sing _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 6011 # text = However, only 64.1 induced NF-AT in the nucleus, correlating with its ability to activate T cells. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 only only ADV RB _ _ _ _ _ 4 64.1 64.1 NUM CD NumType=Card _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 AT At PROPN NNP Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 correlating correlat VERB VBG VerbForm=Ger _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 ability ability NOUN NN Number=Sing _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 activate activate VERB VB VerbForm=Inf _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 6012 # text = Thus, NF-AT induction and IL-2 secretion were correlated with the levels of inositol phosphate release but not with gross levels of tyrosine kinase activity induced late following the response. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 AT AT ADJ JJ Degree=Pos _ _ _ _ 6 induction induction NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 secretion secretion NOUN NN Number=Sing _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 correlated correlate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 levels level NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 inositol inositol ADJ JJ Degree=Pos _ _ _ _ 19 phosphate phosphate NOUN NN Number=Sing _ _ _ _ 20 release release NOUN NN Number=Sing _ _ _ _ 21 but but CCONJ CC _ _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 gross gross ADJ JJ Degree=Pos _ _ _ _ 25 levels level NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 28 kinase kinase NOUN NN Number=Sing _ _ _ _ 29 activity activity NOUN NN Number=Sing _ _ _ _ 30 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 late late ADV RB Degree=Pos _ _ _ _ 32 following follow VERB VBG VerbForm=Ger _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 6013 # text = On the other hand, NF-kappa B induction and IL-2 receptor expression occurred even with the smaller second messenger response generated by OKT3. 1 On on ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 hand hand NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 receptor receptor NOUN NN Number=Sing _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 even even ADV RB _ _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 smaller smaller ADJ JJR Degree=Cmp _ _ _ _ 22 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 23 messenger messenger NOUN NN Number=Sing _ _ _ _ 24 response response NOUN NN Number=Sing _ _ _ _ 25 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 OKT3 OKT3 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6014 # text = Document 003001555 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001555 003001555 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6015 # text = Differentiation of T-helper lymphocytes: selective regulation by members of the STAT family of transcription factors. 1 Differentiation Differentiation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 helper helper NOUN NN Number=Sing _ _ _ _ 5 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 : : PUNCT : _ _ _ _ _ 7 selective selective ADJ JJ Degree=Pos _ _ _ _ 8 regulation regulation NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 members member NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 14 family family NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6016 # text = Interleukin-4 (IL-4) and interleukin-12 (IL-12) control the differentiation of T-helper cells. 1 Interleukin Interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 interleukin interleukin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 -12 -12 NUM CD NumType=Card _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 control control VERB VB VerbForm=Inf _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 helper helper NOUN NN Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 6017 # text = Here we summarize studies which investigate the mechanism by which these cytokines selectively reprogramme gene expression in T-lymphocytes. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 summarize summarize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ _ 5 which which PRON WDT PronType=Rel _ _ _ _ 6 investigate investigate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 which which PRON WDT PronType=Rel _ _ _ _ 11 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 12 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 13 selectively selectively ADV RB _ _ _ _ _ 14 reprogramme reprogramme VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 gene gene ADJ JJ Degree=Pos _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 6018 # text = Cytokine stimulation leads to the phosphorylation of specific tyrosine residues within the intracellular domain of the corresponding cytokine receptor. 1 Cytokine Cytokine NOUN NN Number=Sing _ _ _ _ 2 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 3 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 10 residues residue NOUN NNS Number=Plur _ _ _ _ 11 within within ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 14 domain domain NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 corresponding correspond NOUN NN Number=Sing _ _ _ _ 18 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 19 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 6019 # text = These phosphotyrosines serve as docking sites for latent, cytoplasmic transcription factors known as signal transducers and activators of transcription (Stat) proteins. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 phosphotyrosines phosphotyrosine NOUN NNS Number=Plur _ _ _ _ 3 serve serve VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 as as SCONJ IN _ _ _ _ _ 5 docking docke VERB VBG VerbForm=Ger _ _ _ _ 6 sites site NOUN NNS Number=Plur _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 latent latent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 signal signal ADJ JJ Degree=Pos _ _ _ _ 16 transducers transducer NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 activators activator NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 Stat Stat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 6020 # text = Receptor/Stat interaction is mediated by the src homology 2 (SH2) domain of the corresponding 1 Receptor Receptor PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 / / PUNCT , _ _ _ _ SpaceAfter=No 3 Stat Stat PROPN NNP Number=Sing _ _ _ _ 4 interaction interaction NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 src src NOUN NN Number=Sing _ _ _ _ 10 homology homology NOUN NN Number=Sing _ _ _ _ 11 2 2 NUM CD NumType=Card _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 SH2 SH2 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 domain domain NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 corresponding corresponding NOUN NN Number=Sing _ _ _ _ # sent_id = 6021 # text = Stat protein. 1 Stat Stat NOUN NN Number=Sing _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 . . PUNCT . _ _ _ _ _ # sent_id = 6022 # text = Although Stat binding to the intracellular domain of the cytokine receptor strongly depends on the phosphotyrosine residue, the recruitment of a specific 1 Although although SCONJ IN _ _ _ _ _ 2 Stat Stat PROPN NNP Number=Sing _ _ _ _ 3 binding bind VERB VBG VerbForm=Ger _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 7 domain domain NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 strongly strongly ADV RB _ _ _ _ _ 13 depends depend VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 phosphotyrosine phosphotyrosine NOUN NN Number=Sing _ _ _ _ 17 residue residue NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 specific specific ADJ JJ Degree=Pos _ _ _ _ # sent_id = 6023 # text = Stat protein is dictated by amino acid residues C-terminal to the phosphotyrosine. 1 Stat Stat NOUN NN Number=Sing _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 dictated dictate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 amino amino DET DT _ _ _ _ _ 7 acid acid ADJ JJ Degree=Pos _ _ _ _ 8 residues residue NOUN NNS Number=Plur _ _ _ _ 9 C- C- PUNCT , _ _ _ _ SpaceAfter=No 10 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 phosphotyrosine phosphotyrosine NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 6024 # text = Specific docking sites within individual cytokine receptors have been identified for almost all Stat proteins. 1 Specific specific ADJ JJ Degree=Pos _ _ _ _ 2 docking docking NOUN NN Number=Sing _ _ _ _ 3 sites site NOUN NNS Number=Plur _ _ _ _ 4 within within ADP IN _ _ _ _ _ 5 individual individual ADJ JJ Degree=Pos _ _ _ _ 6 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 7 receptors receptor NOUN NNS Number=Plur _ _ _ _ 8 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 10 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 almost almost ADV RB _ _ _ _ _ 13 all all DET DT _ _ _ _ _ 14 Stat Stat ADJ JJ Degree=Pos _ _ _ _ 15 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 6025 # text = The direct coupling between cytokine receptor and transcription factor helps to explain how different cytokines elicit distinct patterns of gene expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 direct direct ADJ JJ Degree=Pos _ _ _ _ 3 coupling coupling NOUN NN Number=Sing _ _ _ _ 4 between between ADP IN _ _ _ _ _ 5 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 helps help VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 explain explain VERB VB VerbForm=Inf _ _ _ _ 13 how how ADV WRB PronType=Int _ _ _ _ 14 different different ADJ JJ Degree=Pos _ _ _ _ 15 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 16 elicit elicit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 18 patterns pattern NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6026 # text = Document 003001556 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001556 003001556 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6027 # text = Function of NF-kappa 1 Function function NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ # sent_id = 6028 # text = B/Rel binding sites in the major histocompatibility complex class II invariant chain promoter is dependent on cell-specific binding of different NF-kappa B/Rel subunits. 1 B benefit PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 / / PUNCT , _ _ _ _ SpaceAfter=No 3 Rel Rel PROPN NNP Number=Sing _ _ _ _ 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 sites site NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 major major ADJ JJ Degree=Pos _ _ _ _ 9 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 10 complex complex NOUN NN Number=Sing _ _ _ _ 11 class class NOUN NN Number=Sing _ _ _ _ 12 II ii NUM CD NumType=Card _ _ _ _ 13 invariant invariant ADJ JJ Degree=Pos _ _ _ _ 14 chain chain NOUN NN Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 specific specific ADJ JJ Degree=Pos _ _ _ _ 22 binding binding NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 different different ADJ JJ Degree=Pos _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa PROPN NNP Number=Sing _ _ _ _ 28 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 / / PUNCT , _ _ _ _ SpaceAfter=No 30 Rel Rel PROPN NNP Number=Sing _ _ _ _ 31 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6029 # text = The promoter of the human major histocompatibility complex class II-associated invariant-chain gene 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 promoter promoter NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 major major ADJ JJ Degree=Pos _ _ _ _ 7 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 8 complex complex NOUN NN Number=Sing _ _ _ _ 9 class class NOUN NN Number=Sing _ _ _ _ 10 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT : _ _ _ _ SpaceAfter=No 12 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 invariant invariant NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 chain chain NOUN NN Number=Sing _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ # sent_id = 6030 # text = (Ii) contains two NF-kappa B/Rel binding sites located at -109 to -118 (Ii kappa B-1) and -163 to -172 (Ii kappa B-2) from the transcription start site. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 Ii ii X LS _ _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 two two NUM CD NumType=Card _ _ _ _ 6 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 Rel Rel NOUN NN Number=Sing _ _ _ _ 12 binding bind VERB VBG VerbForm=Ger _ _ _ _ 13 sites site NOUN NNS Number=Plur _ _ _ _ 14 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 at at ADP IN _ _ _ _ _ 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 109 109 NUM CD NumType=Card _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 - - SYM SYM _ _ _ _ SpaceAfter=No 20 118 118 NUM CD NumType=Card _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 Ii ii PROPN NNP Number=Sing _ _ _ _ 23 kappa kappa PROPN NNP Number=Sing _ _ _ _ 24 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 1 1 X LS _ _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 - - SYM SYM _ _ _ _ SpaceAfter=No 30 163 163 NUM CD NumType=Card _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 - - SYM SYM _ _ _ _ SpaceAfter=No 33 172 172 NUM CD NumType=Card _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 Ii ii PROPN NNP Number=Sing _ _ _ _ 36 kappa kappa PROPN NNP Number=Sing _ _ _ _ 37 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 2 2 X LS _ _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 from from ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 transcription transcription NOUN NN Number=Sing _ _ _ _ 44 start start NOUN NN Number=Sing _ _ _ _ 45 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 6031 # text = We report here that the differential function of each of these NF-kappa B/Rel sites in several distinct cell types depends on cell-specific binding of NF-kappa B/Rel transcription factors. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 differential differential ADJ JJ Degree=Pos _ _ _ _ 7 function function NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 each each DET DT _ _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 12 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 / / PUNCT , _ _ _ _ SpaceAfter=No 17 Rel Rel NOUN NN Number=Sing _ _ _ _ 18 sites site NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 several several ADJ JJ Degree=Pos _ _ _ _ 21 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 types type NOUN NNS Number=Plur _ _ _ _ 24 depends depend VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 specific specific ADJ JJ Degree=Pos _ _ _ _ 29 binding binding NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappa kappa PROPN NNP Number=Sing _ _ _ _ 34 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 / / PUNCT , _ _ _ _ SpaceAfter=No 36 Rel Rel PROPN NNP Number=Sing _ _ _ _ 37 transcription transcription NOUN NN Number=Sing _ _ _ _ 38 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 6032 # text = Ii kappa B-1 is a positive regulatory element in B-cell lines and in the Ii-expressing T-cell line, H9, but acts as a negative regulatory element in myelomonocytic and glia cell lines. 1 Ii ii PROPN NNP Number=Sing _ _ _ _ 2 kappa kappa PROPN NNP Number=Sing _ _ _ _ 3 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 positive positive ADJ JJ Degree=Pos _ _ _ _ 9 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 10 element element NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 B B ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 lines line NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 Ii ii PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 expressing express VERB VBG VerbForm=Ger _ _ _ _ 22 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 H9 H9 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 but but CCONJ CC _ _ _ _ _ 29 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 as as ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 negative negative ADJ JJ Degree=Pos _ _ _ _ 33 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 34 element element NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 myelomonocytic myelomonocytic ADJ JJ Degree=Pos _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 glia glia ADJ JJ Degree=Pos _ _ _ _ 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 6033 # text = In vivo protein-DNA contacts are detectable at 1 In in ADP IN _ _ _ _ _ 2 vivo vivo NOUN NN Number=Sing _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 DNA dna NOUN NN Number=Sing _ _ _ _ 6 contacts contact NOUN NNS Number=Plur _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 9 at at ADP IN _ _ _ _ _ # sent_id = 6034 # text = Ii kappa B-1 in cell lines in which this site is functional as either a positive or negative regulator. 1 Ii ii PROPN NNP Number=Sing _ _ _ _ 2 kappa kappa PROPN NNP Number=Sing _ _ _ _ 3 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 lines line NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 which which PRON WDT PronType=Rel _ _ _ _ 11 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 functional functional ADJ JJ Degree=Pos _ _ _ _ 15 as as SCONJ IN _ _ _ _ _ 16 either either CCONJ CC _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 positive positive ADJ JJ Degree=Pos _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 negative negative ADJ JJ Degree=Pos _ _ _ _ 21 regulator regulator NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 6035 # text = Electrophoretic mobility supershift assays determine that members of the NF-kappa B/Rel family of transcription factors can bind to this site in vitro and that DNA-binding complexes that contain p50, p52, p65, and cRel correlate with positive regulation whereas the presence of p50 correlates with negative regulation. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 supershift supershift VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 assays assays NOUN NNS Number=Plur _ _ _ _ 5 determine determine VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 members member NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa PROPN NNP Number=Sing _ _ _ _ 13 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 Rel Rel PROPN NNP Number=Sing _ _ _ _ 16 family family NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factors factor NOUN NNS Number=Plur _ _ _ _ 20 can can AUX MD VerbForm=Fin _ _ _ _ 21 bind bind VERB VB VerbForm=Inf _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 24 site site NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 vitro vitro NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 that that SCONJ IN _ _ _ _ _ 29 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 binding bind VERB VBG VerbForm=Ger _ _ _ _ 32 complexes complex NOUN NNS Number=Plur _ _ _ _ 33 that that PRON WDT PronType=Rel _ _ _ _ 34 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 p52 p52 NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 cRel cRel NOUN NN Number=Sing _ _ _ _ 43 correlate correlate NOUN NN Number=Sing _ _ _ _ 44 with with ADP IN _ _ _ _ _ 45 positive positive ADJ JJ Degree=Pos _ _ _ _ 46 regulation regulation NOUN NN Number=Sing _ _ _ _ 47 whereas whereas SCONJ IN _ _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 presence presence NOUN NN Number=Sing _ _ _ _ 50 of of ADP IN _ _ _ _ _ 51 p50 p50 NUM CD NumType=Card _ _ _ _ 52 correlates correlate NOUN NNS Number=Plur _ _ _ _ 53 with with ADP IN _ _ _ _ _ 54 negative negative ADJ JJ Degree=Pos _ _ _ _ 55 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 6036 # text = Ii kappa B-2 is a site of positive regulation in B-cell lines and a site of negative regulation in H9 T cells, myelomonocytic, and glial cell lines. 1 Ii ii PROPN NNP Number=Sing _ _ _ _ 2 kappa kappa PROPN NNP Number=Sing _ _ _ _ 3 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 site site NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 positive positive ADJ JJ Degree=Pos _ _ _ _ 11 regulation regulation NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 B B ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 lines line NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 site site NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 negative negative ADJ JJ Degree=Pos _ _ _ _ 22 regulation regulation NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 H9 H9 PROPN NNP Number=Sing _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 myelomonocytic myelomonocytic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 glial glial ADJ JJ Degree=Pos _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 6037 # text = In vivo occupancy of this site is observed only in the H9 T-cell line. 1 In in ADP IN _ _ _ _ _ 2 vivo vivo ADJ JJ Degree=Pos _ _ _ _ 3 occupancy occupancy NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 site site NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 only only ADV RB _ _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 H9 h9 NOUN NN Number=Sing _ _ _ _ 13 T- T- PUNCT , _ _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 6038 # text = Again, in vitro supershift studies indicate that the presence of p50, p52, p65, and cRel correlates with positive function whereas the presence of only p50 and p52 correlates with negative function. 1 Again again ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 5 supershift supershift ADJ JJ Degree=Pos _ _ _ _ 6 studies study NOUN NNS Number=Plur _ _ _ _ 7 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 presence presence NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 p52 p52 NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 cRel cRel NOUN NN Number=Sing _ _ _ _ 20 correlates correlate NOUN NNS Number=Plur _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 positive positive ADJ JJ Degree=Pos _ _ _ _ 23 function function NOUN NN Number=Sing _ _ _ _ 24 whereas whereas SCONJ IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 presence presence NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 only only ADV RB _ _ _ _ _ 29 p50 p50 NUM CD NumType=Card _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 p52 p52 NUM CD NumType=Card _ _ _ _ 32 correlates correlate NOUN NNS Number=Plur _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 negative negative ADJ JJ Degree=Pos _ _ _ _ 35 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 6039 # text = This differential binding of specific NF-kappa B/Rel subunits is likely to mediate the disparate functions of these two NF-kappa B/Rel binding sites. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 differential differential NOUN NN Number=Sing _ _ _ _ 3 binding binding VERB VBG VerbForm=Ger _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 Rel Rel PROPN NNP Number=Sing _ _ _ _ 12 subunits subunit NOUN NNS Number=Plur _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 likely likely ADJ JJ Degree=Pos _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 disparate disparate ADJ JJ Degree=Pos _ _ _ _ 19 functions function NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 22 two two NUM CD NumType=Card _ _ _ _ 23 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 / / PUNCT , _ _ _ _ SpaceAfter=No 28 Rel Rel NOUN NN Number=Sing _ _ _ _ 29 binding bind VERB VBG VerbForm=Ger _ _ _ _ 30 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6040 # text = Document 003001557 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001557 003001557 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6041 # text = Induction of relA(p65) and I kappa B alpha subunit expression during differentiation of human peripheral blood monocytes to macrophages. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 relA relA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 p65 p65 X LS _ _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 kappa kappa X FW Foreign=Yes _ _ _ _ 10 B b X LS _ _ _ _ _ 11 alpha alpha X FW Foreign=Yes _ _ _ _ 12 subunit subunit NOUN NN Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 during during ADP IN _ _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 19 blood blood NOUN NN Number=Sing _ _ _ _ 20 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6042 # text = We evaluated the expression and DNA binding activity of nuclear factor (NF)-kappa B subunits in human peripheral blood monocytes and in monocyte-derived macrophages (MDMs). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 evaluated evaluate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 subunits subunit NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 22 blood blood NOUN NN Number=Sing _ _ _ _ 23 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 MDMs Mdms NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 6043 # text = Constitutive DNA binding activity consisting of p50 homodimers was detected in nuclear extracts from both cell types. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ _ 3 binding binde VERB VBG VerbForm=Ger _ _ _ _ 4 activity activity NOUN NN Number=Sing _ _ _ _ 5 consisting consisting NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 p50 p50 NUM CD NumType=Card _ _ _ _ 8 homodimers homodimer NOUN NNS Number=Plur _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 extracts extract NOUN NNS Number=Plur _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 both both DET DT _ _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 6044 # text = An additional complex composed of p50/RelA(p65) heterodimers appeared only in nuclear extracts from 7-day MDMs. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 additional additional ADJ JJ Degree=Pos _ _ _ _ 3 complex complex NOUN NN Number=Sing _ _ _ _ 4 composed compose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 p50/ p50ith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 7 RelA RelA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 12 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 only only ADV RB _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 extracts extract NOUN NNS Number=Plur _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 day day NOUN NN Number=Sing _ _ _ _ 21 MDMs MDM NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 6045 # text = Immunoblot analysis showed that the p50 subunit was constitutively expressed in monocytes and MDMs. 1 Immunoblot Immunoblot PROPN NNP Number=Sing _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 p50 p50 NOUN NN Number=Sing _ _ _ _ 7 subunit subunit NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 constitutively constitutively ADV RB _ _ _ _ _ 10 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 MDMs MDM NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 6046 # text = In contrast, the RelA(p65) subunit was barely detectable in monocytes, but its level increased markedly in MDMs. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 RelA Rela NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 subunit subunit NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 barely barely ADV RB _ _ _ _ _ 12 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 18 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 level level NOUN NN Number=Sing _ _ _ _ 20 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 markedly markedly ADV RB _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 MDMs Mdms PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 6047 # text = Analysis of RelA(p65) mRNA revealed that the stability of RelA(p65) mRNA was significantly higher in MDMs, compared with monocytes. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 RelA RelA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 p65 p65 X LS _ _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 8 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 stability stability NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 RelA RelA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 significantly significantly ADV RB _ _ _ _ _ 20 higher higher ADJ JJR Degree=Cmp _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 MDMs Mdms PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 6048 # text = In MDMs, an upregulation of I kappa B alpha synthesis as well as the appearance of a novel M(r) 40,000 form of I kappa B alpha were also observed. 1 In in ADP IN _ _ _ _ _ 2 MDMs Mdms PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 8 kappa kappa X FW Foreign=Yes _ _ _ _ 9 B B ADJ JJ Degree=Pos _ _ _ _ 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 12 as as ADV RB _ _ _ _ _ 13 well well ADV RB Degree=Pos _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 appearance appearance NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 novel novel NOUN NN Number=Sing _ _ _ _ 20 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 r be NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 40,000 40,000 NUM CD NumType=Card _ _ _ _ 25 form form NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 28 kappa kappa PROPN NNP Number=Sing _ _ _ _ 29 B B PROPN NNP Number=Sing _ _ _ _ 30 alpha alpha NOUN NN Number=Sing _ _ _ _ 31 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 also also ADV RB _ _ _ _ _ 33 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 6049 # text = These results suggest that macrophage differentiation results in the expression of active p50/RelA(p65) heterodimers with the capacity to activate target gene expression. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 macrophage macrophage ADJ JJ Degree=Pos _ _ _ _ 6 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 7 results result NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 active active ADJ JJ Degree=Pos _ _ _ _ 13 p50/ p50/ PUNCT HYPH _ _ _ _ SpaceAfter=No 14 RelA Rela NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 capacity capacity NOUN NN Number=Sing _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 activate activate VERB VB VerbForm=Inf _ _ _ _ 24 target target NOUN NN Number=Sing _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 6050 # text = The parallel induction of I kappa B alpha synthesis may allow for the continuous presence of a cytoplasmic reservoir of p50/RelA(p65) complexes that are readily available for inducer-mediated stimulation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 parallel parallel ADJ JJ Degree=Pos _ _ _ _ 3 induction induction NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 kappa kappa X FW Foreign=Yes _ _ _ _ 7 B B ADJ JJ Degree=Pos _ _ _ _ 8 alpha alpha NOUN NN Number=Sing _ _ _ _ 9 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 10 may may AUX MD VerbForm=Fin _ _ _ _ 11 allow allow VERB VB VerbForm=Inf _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 continuous continuous ADJ JJ Degree=Pos _ _ _ _ 15 presence presence NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 19 reservoir reservoir NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 p50/ p50/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 22 RelA Rela PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 complexes complexe NOUN NNS Number=Plur _ _ _ _ 27 that that PRON WDT PronType=Rel _ _ _ _ 28 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 readily readily ADV RB _ _ _ _ _ 30 available available ADJ JJ Degree=Pos _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 inducer inducer ADV RB _ _ _ _ SpaceAfter=No 33 -mediated -mediated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6051 # text = Document 003001558 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001558 003001558 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6052 # text = CholecystokininB receptor from human Jurkat lymphoblastic T cells is involved in activator protein-1-responsive gene activation. 1 CholecystokininB Cholecystokininb VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 6 lymphoblastic lymphoblastic ADJ JJ Degree=Pos _ _ _ _ 7 T t NUM CD NumType=Card _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 involved involved ADJ JJ Degree=Pos _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 activator activator NOUN NN Number=Sing _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6053 # text = The aim of this study was to analyze the role of cholecystokinin (CCK(B)) receptor in human lymphoblastic Jurkat T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 aim aim NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 study study NOUN NN Number=Sing _ _ _ _ 6 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 analyze analyze VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 role role NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 cholecystokinin cholecystokinin NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 CCK Cck NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 receptor receptor NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 lymphoblastic lymphoblastic ADJ JJ Degree=Pos _ _ _ _ 23 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 6054 # text = We investigated the trophic effect resulting from activation of such a receptor by using the reporter gene strategy. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 trophic trophic ADJ JJ Degree=Pos _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 resulting result VERB VBG VerbForm=Ger _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 such such DET PDT _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 by by SCONJ IN _ _ _ _ _ 14 using use VERB VBG VerbForm=Ger _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 reporter reporter NOUN NN Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 strategy strategy NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 6055 # text = For this purpose, we transiently transfected Jurkat T cells with the reporter plasmid p[(TRE)3-tk-Luc] and found that CCK-8 was able to dose-dependently induce luciferase expression related to activator protein-1 (AP-1) activation with a maximal response identical to that obtained with compounds known to activate AP-1 complex (quantitatively, the same level of induction was obtained with 1 nM 12-O-tetradecanoylphorbol-13-acetate, 100 microM diacylglycerol, or 4 nM epidermal growth factor). 1 For for ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 purpose purpose NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 transiently transiently ADV RB _ _ _ _ _ 7 transfected transfect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 reporter reporter NOUN NN Number=Sing _ _ _ _ 14 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 15 p[ p[ PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 TRE Tre NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 tk tk NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 Luc Luc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ] ] PUNCT -RRB- _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 that that SCONJ IN _ _ _ _ _ 28 CCK CCK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 8 8 PROPN NNP Number=Sing _ _ _ _ 31 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 32 able able ADJ JJ Degree=Pos _ _ _ _ 33 to to PART TO _ _ _ _ _ 34 dose dose VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 dependently dependently ADV RB _ _ _ _ _ 37 induce induce NOUN NN Number=Sing _ _ _ _ 38 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 39 expression expression NOUN NN Number=Sing _ _ _ _ 40 related related ADJ JJ Degree=Pos _ _ _ _ 41 to to PART TO _ _ _ _ _ 42 activator activator VERB VB VerbForm=Inf _ _ _ _ 43 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 1 1 NUM CD NumType=Card _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ _ 51 activation activation NOUN NN Number=Sing _ _ _ _ 52 with with ADP IN _ _ _ _ _ 53 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 54 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 55 response response NOUN NN Number=Sing _ _ _ _ 56 identical identical ADJ JJ Degree=Pos _ _ _ _ 57 to to ADP IN _ _ _ _ _ 58 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 59 obtained obtaine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 60 with with ADP IN _ _ _ _ _ 61 compounds compound NOUN NNS Number=Plur _ _ _ _ 62 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 63 to to PART TO _ _ _ _ _ 64 activate activate VERB VB VerbForm=Inf _ _ _ _ 65 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 66 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 67 1 1 NUM CD NumType=Card _ _ _ _ 68 complex complex NOUN NN Number=Sing _ _ _ _ 69 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 70 quantitatively quantitatively ADV RB _ _ _ _ SpaceAfter=No 71 , , PUNCT , _ _ _ _ _ 72 the the DET DT Definite=Def|PronType=Art _ _ _ _ 73 same same ADJ JJ Degree=Pos _ _ _ _ 74 level level NOUN NN Number=Sing _ _ _ _ 75 of of ADP IN _ _ _ _ _ 76 induction induction NOUN NN Number=Sing _ _ _ _ 77 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 78 obtained obtain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 79 with with ADP IN _ _ _ _ _ 80 1 1 NUM CD NumType=Card _ _ _ _ 81 nM nm NUM CD NumType=Card _ _ _ _ 82 12-O-tetradecanoylphorbol 12-O-tetradecanoylphorbol NOUN NN Number=Sing _ _ _ SpaceAfter=No 83 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 84 -acetate -acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 85 , , PUNCT , _ _ _ _ _ 86 100 100 NUM CD NumType=Card _ _ _ _ 87 microM microm NUM CD NumType=Card _ _ _ _ 88 diacylglycerol diacylglycerol NOUN NN Number=Sing _ _ _ SpaceAfter=No 89 , , PUNCT , _ _ _ _ _ 90 or or CCONJ CC _ _ _ _ _ 91 4 4 NUM CD NumType=Card _ _ _ _ 92 nM nm ADJ JJ Degree=Pos _ _ _ _ 93 epidermal epidermal ADJ JJ Degree=Pos _ _ _ _ 94 growth growth NOUN NN Number=Sing _ _ _ _ 95 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 96 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 97 . . PUNCT . _ _ _ _ _ # sent_id = 6056 # text = The involvement of the CCK(B) receptor in such a stimulation was demonstrated by the inhibiting effect of the selective CCK(B) receptor antagonist PD-135,158. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 involvement involvement NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 CCK CCK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 B b X LS _ _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 such such DET PDT _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 19 effect effect NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 selective selective ADJ JJ Degree=Pos _ _ _ _ 23 CCK CCK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 B b X LS _ _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 receptor receptor NOUN NN Number=Sing _ _ _ _ 28 antagonist antagonist NOUN NN Number=Sing _ _ _ _ 29 PD P NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 -135,158 -135,158 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 6057 # text = This effect was confirmed in COS-7 cells transfected with the cDNA of CCK(B) receptor cloned from Jurkat T cells. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 confirmed confirm VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 COS COS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 7 7 NUM CD NumType=Card _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 CCK CCK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 receptor receptor NOUN NN Number=Sing _ _ _ _ 20 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 23 T T PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 6058 # text = To better understand the AP-1-dependent luciferase expression in Jurkat T cells, we tested two specific inhibitors of serine/threonine phosphatases-1 and -2A: okadaic acid and calyculin A. 1 To to ADV RB _ _ _ _ _ 2 better better ADV RBR Degree=Cmp _ _ _ _ 3 understand understand VERB VB VerbForm=Inf _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 10 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 14 T T PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 18 tested test VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 two two NUM CD NumType=Card _ _ _ _ 20 specific specific ADJ JJ Degree=Pos _ _ _ _ 21 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 / / PUNCT , _ _ _ _ SpaceAfter=No 25 threonine threonine NUM CD NumType=Card _ _ _ _ 26 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 - - SYM SYM _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2A 2a NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 : : PUNCT : _ _ _ _ _ 33 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 34 acid acid NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 calyculin calyculin NOUN NN Number=Sing _ _ _ _ 37 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 6059 # text = These compounds strongly increased the phorbol-12-myristate-13-acetate response, whereas we have not observed a contribution of phosphatase inhibitors on a CCK-8-induced luciferase activity. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 compounds compound NOUN NNS Number=Plur _ _ _ _ 3 strongly strongly ADV RB _ _ _ _ _ 4 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 phorbol phorbol NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 -12-myristate -12-myristate NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 -acetate -acetate ADJ JJ Degree=Pos _ _ _ _ 10 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 whereas whereas SCONJ IN _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 contribution contribution NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 21 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 22 on on ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 CCK CCK NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 8 8 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 30 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 6060 # text = To confirm that CCK(B) receptors are involved in AP-1 response, we investigated the CCK-8 effect on interleukin-2 expression, a natural endogenous gene regulated by several factors, including AP-1. 1 To to PART TO _ _ _ _ _ 2 confirm confirm VERB VB VerbForm=Inf _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 CCK CCK NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 receptors receptor NOUN NNS Number=Plur _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 involved involved ADJ JJ Degree=Pos _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 18 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 CCK CCK NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 8 8 NUM CD NumType=Card _ _ _ _ 23 effect effect NOUN NN Number=Sing _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 natural natural ADJ JJ Degree=Pos _ _ _ _ 32 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ _ 34 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 several several ADJ JJ Degree=Pos _ _ _ _ 37 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 including include VERB VBG VerbForm=Ger _ _ _ _ 40 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 6061 # text = In Jurkat T cells activated by phorbol-12-myristate-13-acetate and phytohemagglutinin, CCK-8 induced IL-2 expression. 1 In in ADP IN _ _ _ _ _ 2 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 phorbol phorbol NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 -12-myristate -12-myristate NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 acetate acetate NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 phytohemagglutinin phytohemagglutinin NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 CCK CCK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 8 8 PROPN NNP Number=Sing _ _ _ _ 19 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 6062 # text = This induction was abolished by PD-135,158. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 abolished abolish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 PD PD NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 135,158 135,158 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 6063 # text = Our results indicate that CCK-8 exerts a trophic effect in Jurkat T cells through stimulation of CCK(B) receptors by modulation of expression of AP-1-regulated genes. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 CCK CCK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 8 8 NUM CD NumType=Card _ _ _ _ 8 exerts exert NOUN NNS Number=Plur _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 trophic trophic ADJ JJ Degree=Pos _ _ _ _ 11 effect effect NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 through through ADP IN _ _ _ _ _ 17 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 CCK CCK NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 receptors receptor NOUN NNS Number=Plur _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 modulation modulation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6064 # text = Document 003001565 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001565 003001565 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6065 # text = Phosphatidylinositides bind to plasma membrane CD14 and can prevent monocyte activation by bacterial lipopolysaccharide. 1 Phosphatidylinositides Phosphatidylinositides NOUN NNS Number=Plur _ _ _ _ 2 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 plasma plasma NOUN NN Number=Sing _ _ _ _ 5 membrane membrane NOUN NN Number=Sing _ _ _ _ 6 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 14 14 NUM CD NumType=Card _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 can can AUX MD VerbForm=Fin _ _ _ _ 10 prevent prevent VERB VB VerbForm=Inf _ _ _ _ 11 monocyte monocyte ADJ JJ Degree=Pos _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 15 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6066 # text = Although bacterial lipopolysaccharides (LPS) and several other microbial agonists can bind to mCD14 (membrane CD14), a cell-surface receptor found principally on monocytes and neutrophils, host-derived mCD14 ligands are poorly defined. 1 Although although SCONJ IN _ _ _ _ _ 2 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 3 lipopolysaccharides lipopolysaccharide NOUN NNS Number=Plur _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 several several ADJ JJ Degree=Pos _ _ _ _ 9 other other ADJ JJ Degree=Pos _ _ _ _ 10 microbial microbial ADJ JJ Degree=Pos _ _ _ _ 11 agonists agonist NOUN NNS Number=Plur _ _ _ _ 12 can can AUX MD VerbForm=Fin _ _ _ _ 13 bind bind VERB VB VerbForm=Inf _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 mCD14 mCD14 NUM CD NumType=Card _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 membrane membrane NOUN NN Number=Sing _ _ _ _ 18 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 14 14 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 surface surface NOUN NN Number=Sing _ _ _ _ 26 receptor receptor NOUN NN Number=Sing _ _ _ _ 27 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 principally principally ADV RB _ _ _ _ _ 29 on on ADP IN _ _ _ _ _ 30 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 host host NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 mCD mcd NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 14 14 NUM CD NumType=Card _ _ _ _ 39 ligands ligand NOUN NNS Number=Plur _ _ _ _ 40 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 41 poorly poorly ADV RB _ _ _ _ _ 42 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 6067 # text = We report here that phosphatidylinositol (PtdIns), phosphatidylinositol-4-phosphate, and other phosphatidylinositides can bind to mCD14. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 phosphatidylinositol phosphatidylinositol NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 PtdIns PtdIn NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 phosphatidylinositol phosphatidylinositol NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 phosphate phosphate NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 other other ADJ JJ Degree=Pos _ _ _ _ 18 phosphatidylinositides phosphatidylinositide NOUN NNS Number=Plur _ _ _ _ 19 can can AUX MD VerbForm=Fin _ _ _ _ 20 bind bind VERB VB VerbForm=Inf _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 mCD14 mCD14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 6068 # text = Phosphatidylserine (PS), another anionic glycerophospholipid, binds to mCD14 with lower apparent affinity than does PtdIns. 1 Phosphatidylserine Phosphatidylserine NOUN NN Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 PS ps NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 another another DET DT _ _ _ _ _ 7 anionic anionic ADJ JJ Degree=Pos _ _ _ _ 8 glycerophospholipid glycerophospholipid NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 binds bind NOUN NNS Number=Plur _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 mCD14 mCD14 NUM CD NumType=Card _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 lower lower ADJ JJR Degree=Cmp _ _ _ _ 15 apparent apparent ADJ JJ Degree=Pos _ _ _ _ 16 affinity affinity NOUN NN Number=Sing _ _ _ _ 17 than than ADP IN _ _ _ _ _ 18 does do VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 PtdIns PtdIn NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 6069 # text = LPS-binding protein, a lipid transfer protein found in serum, facilitates both PS- and PtdIns-mCD14 binding. 1 LPS Lp INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 binding bind VERB VBG VerbForm=Ger _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 lipid lipid ADJ JJ Degree=Pos _ _ _ _ 8 transfer transfer NOUN NN Number=Sing _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 serum serum NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 facilitates facilitate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 both both DET DT _ _ _ _ _ 16 PS ps NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 PtdIns- PtdIns- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 mCD14 mCD14 NOUN NN Number=Sing _ _ _ _ 21 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 6070 # text = PtdIns binding to mCD14 can be blocked by anti-CD14 monoclonal antibodies that inhibit LPS-mCD14 binding, and PtdIns can inhibit both LPS-mCD14 binding and LPS-induced responses in monocytes. 1 PtdIns PtdIn NOUN NNS Number=Plur _ _ _ _ 2 binding bind VERB VBG VerbForm=Ger _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 mCD14 mCD14 PROPN NNP Number=Sing _ _ _ _ 5 can can AUX MD VerbForm=Fin _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 anti-CD anti-cd ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 14 14 NUM CD NumType=Card _ _ _ _ 11 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 12 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 inhibit inhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 LPS Lps NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 mCD14 mcd14 NOUN NN Number=Sing _ _ _ _ 18 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 PtdIns PtdIn NOUN NNS Number=Plur _ _ _ _ 22 can can AUX MD VerbForm=Fin _ _ _ _ 23 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 24 both both CCONJ CC _ _ _ _ _ 25 LPS Lps PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 mCD14 mcd14 PROPN NNP Number=Sing _ _ _ _ 28 binding binding VERB VBG VerbForm=Ger _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 LPS Lps PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 responses response NOUN NNS Number=Plur _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 6071 # text = Serum-equilibrated PtdIns also binds to mCD14-expressing cells, raising the possibility that endogenous PtdIns may modulate cellular responses to LPS and other mCD14 ligands in vivo. 1 Serum- Serum- SYM NFP _ _ _ _ SpaceAfter=No 2 equilibrated equilibrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 PtdIns PtdIns NOUN NNS Number=Plur _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 mCD14 mCD14 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 -expressing -expressing ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 raising raise VERB VBG VerbForm=Ger _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 possibility possibility NOUN NN Number=Sing _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 16 PtdIns PtdIn NOUN NNS Number=Plur _ _ _ _ 17 may may AUX MD VerbForm=Fin _ _ _ _ 18 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 19 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 20 responses response NOUN NNS Number=Plur _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 LPS LPS NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 other other ADJ JJ Degree=Pos _ _ _ _ 25 mCD mcd NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 14 14 NUM CD NumType=Card _ _ _ _ 27 ligands ligand NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 vivo. vivo. NOUN NN Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6072 # text = Document 003001581 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001581 003001581 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6073 # text = Transcriptional regulation of the pyruvate kinase erythroid-specific promoter. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 pyruvate pyruvate ADJ JJ Degree=Pos _ _ _ _ 6 kinase kinase NOUN NN Number=Sing _ _ _ _ 7 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6074 # text = Mammal pyruvate kinases are encoded by two genes. 1 Mammal Mammal ADJ JJ Degree=Pos _ _ _ _ 2 pyruvate pyruvate NOUN NN Number=Sing _ _ _ _ 3 kinases kinase NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 encoded encod VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 6075 # text = The L gene produces the erythroid (R-PK) or the hepatic (L-PK) isozymes by the alternative use of two promoters. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 L l ADJ JJ Degree=Pos _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ _ 4 produces produce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 erythroid erythroid NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 R R PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 PK PK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 hepatic hepatic ADJ JJ Degree=Pos _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 L L PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 PK PK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 isozymes isozyme VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 24 use use NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 two two NUM CD NumType=Card _ _ _ _ 27 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 6076 # text = We report the characterization of the cis- and trans-acting elements involved in the tissue-specific activity of the L gene erythroid promoter. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 characterization characterization NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 acting act VERB VBG VerbForm=Ger _ _ _ _ 13 elements element NOUN NNS Number=Plur _ _ _ _ 14 involved involve ADJ JJ Degree=Pos _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 L L PROPN NNP Number=Sing _ _ _ _ 24 gene gene PROPN NNP Number=Sing _ _ _ _ 25 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 26 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 6077 # text = A R-PK DNA fragment extending from -870 to +54 relative to the cap site confers erythroid specificity to a reporter gene. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 R R NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 PK PK NOUN NN Number=Sing _ _ _ _ 5 DNA dna NOUN NN Number=Sing _ _ _ _ 6 fragment fragment NOUN NN Number=Sing _ _ _ _ 7 extending extend VERB VBG VerbForm=Ger _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 870 870 NUM CD NumType=Card _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 + + SYM SYM _ _ _ _ SpaceAfter=No 13 54 54 NUM CD NumType=Card _ _ _ _ 14 relative relative ADV RB _ _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 cap cap NOUN NN Number=Sing _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ _ 19 confers confer NOUN NNS Number=Plur _ _ _ _ 20 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 21 specificity specificity NOUN NN Number=Sing _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 reporter reporter NOUN NN Number=Sing _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 6078 # text = Within this region, we define a minimal promoter (-62 to +54) that displays erythroid-specific activity and contains two DNA binding sites. 1 Within within ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 define define VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 (- (- PUNCT . _ _ _ _ SpaceAfter=No 11 62 62 NUM CD NumType=Card _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 + + SYM SYM _ _ _ _ SpaceAfter=No 14 54 54 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 displays display VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 specific specific ADJ JJ Degree=Pos _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 two two NUM CD NumType=Card _ _ _ _ 25 DNA dna NOUN NN Number=Sing _ _ _ _ 26 binding binding VERB VBG VerbForm=Ger _ _ _ _ 27 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 6079 # text = One, located at -50, binds members of the CCACC/Sp1 family and the other, located at -20, binds the erythroid factor GATA-1. 1 One one NUM CD NumType=Card _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 at at ADP IN _ _ _ _ _ 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 members member NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 CCACC CCACC NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 / / PUNCT , _ _ _ _ SpaceAfter=No 14 Sp1 sp1 NUM CD NumType=Card _ _ _ _ 15 family family NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 other other ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 at at ADP IN _ _ _ _ _ 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 28 factor factor NOUN NN Number=Sing _ _ _ _ 29 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 6080 # text = Although the -20 GATA binding site (AGATAA) is also a potential TFIID binding site, it does not bind TFIID. 1 Although although SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 20 20 NUM CD NumType=Card _ _ _ _ 5 GATA GATa NOUN NN Number=Sing _ _ _ _ 6 binding binding VERB VBG VerbForm=Ger _ _ _ _ 7 site site NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 AGATAA AGATAA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 also also ADV RB _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 potential potential ADJ JJ Degree=Pos _ _ _ _ 15 TFIID tFIId NOUN NN Number=Sing _ _ _ _ 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 20 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 bind bind VERB VB VerbForm=Inf _ _ _ _ 23 TFIID tFIId PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 6081 # text = Furthermore, the substitution of this GATA binding site by a canonical TFIID binding site suppresses the promoter activity. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 substitution substitution NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 GATA GATa NOUN NN Number=Sing _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 site site NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 canonical canonical ADJ JJ Degree=Pos _ _ _ _ 13 TFIID tFIId NOUN NN Number=Sing _ _ _ _ 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 site site NOUN NN Number=Sing _ _ _ _ 16 suppresses suppress VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 6082 # text = Mutations and deletions of both sites indicate that only the association of CCACC/Sp1 and GATA binding sites can drive efficient and tissue-specific expression of this R-PK minimal promoter. 1 Mutations Mutation NOUN NNS Number=Plur _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 deletions deletion NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 both both DET DT _ _ _ _ _ 6 sites site NOUN NNS Number=Plur _ _ _ _ 7 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 only only ADV RB _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 association association NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 CCACC CCACC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 GATA GATA PROPN NNP Number=Sing _ _ _ _ 18 binding binding VERB VBG VerbForm=Ger _ _ _ _ 19 sites site NOUN NNS Number=Plur _ _ _ _ 20 can can AUX MD VerbForm=Fin _ _ _ _ 21 drive drive VERB VB VerbForm=Inf _ _ _ _ 22 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 tissue tissue ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 specific specific ADJ JJ Degree=Pos _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 30 R R PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 PK PK PROPN NNP Number=Sing _ _ _ _ 33 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 34 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 6083 # text = Finally, by co-transfection experiments, we study the elements involved in the hGATA-1 transactivation of the R-PK promoter in HeLa cells. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 co-transfection co-transfection NOUN NN Number=Sing _ _ _ _ 5 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 8 study study VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 elements element NOUN NNS Number=Plur _ _ _ _ 11 involved involved ADJ JJ Degree=Pos _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 hGATA hGATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 R R PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 PK PK PROPN NNP Number=Sing _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6084 # text = Document 003001585 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001585 003001585 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6085 # text = The peri-kappa B site mediates human immunodeficiency virus type 2 enhancer activation in monocytes but not in T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 peri-kappa peri-kappa NOUN NN Number=Sing _ _ _ _ 3 B b NOUN NN Number=Sing _ _ _ _ 4 site site NOUN NN Number=Sing _ _ _ _ 5 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 8 virus virus NOUN NN Number=Sing _ _ _ _ 9 type type NOUN NN Number=Sing _ _ _ _ 10 2 2 NUM CD NumType=Card _ _ _ _ 11 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6086 # text = Human immunodeficiency virus type 2 (HIV-2), like HIV-1, causes AIDS and is associated with AIDS cases primarily in West Africa. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 3 virus virus NOUN NN Number=Sing _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ _ 5 2 2 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 like like ADP IN _ _ _ _ _ 13 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 causes cause VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 AIDS aid NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 AIDS aids NOUN NN Number=Sing _ _ _ _ 24 cases case NOUN NNS Number=Plur _ _ _ _ 25 primarily primarily ADV RB _ _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 West West PROPN NNP Number=Sing _ _ _ _ 28 Africa Africa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 6087 # text = HIV-1 and HIV-2 display significant differences in nucleic acid sequence and in the natural history of clinical disease. 1 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 display display NOUN NN Number=Sing _ _ _ _ 9 significant significant ADJ JJ Degree=Pos _ _ _ _ 10 differences difference NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 nucleic nucleic ADJ JJ Degree=Pos _ _ _ _ 13 acid acid ADJ JJ Degree=Pos _ _ _ _ 14 sequence sequence NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 natural natural ADJ JJ Degree=Pos _ _ _ _ 19 history history NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 22 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 6088 # text = Consistent with these differences, we have previously demonstrated that the enhancer/promoter region of HIV-2 functions quite differently from that of HIV-1. 1 Consistent consistent ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 differences difference NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 previously previously ADV RB _ _ _ _ _ 9 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 / / PUNCT , _ _ _ _ SpaceAfter=No 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 region region NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ _ 20 functions function NOUN NNS Number=Plur _ _ _ _ 21 quite quite ADV RB _ _ _ _ _ 22 differently differently ADV RB _ _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 6089 # text = Whereas activation of the HIV-1 enhancer following T-cell stimulation is mediated largely through binding of the transcription factor NF-kappa B to two adjacent kappa B sites in the HIV-1 long terminal repeat, activation of the HIV-2 enhancer in monocytes and T cells is dependent on four cis-acting elements: a single kappa B site, two purine-rich binding sites, PuB1 and PuB2, and a pets site. 1 Whereas whereas ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 9 following follow VERB VBG VerbForm=Ger _ _ _ _ 10 T- T- PUNCT : _ _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 largely largely ADV RB _ _ _ _ _ 16 through through ADV RB _ _ _ _ _ 17 binding binding VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 two two NUM CD NumType=Card _ _ _ _ 28 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ _ 31 sites site NOUN NNS Number=Plur _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ _ 37 long long ADJ JJ Degree=Pos _ _ _ _ 38 terminal terminal NOUN NN Number=Sing _ _ _ _ 39 repeat repeat NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 activation activation NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 2 2 NUM CD NumType=Card _ _ _ _ 47 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 T t NOUN NN Number=Sing _ _ _ _ 52 cells cell NOUN NNS Number=Plur _ _ _ _ 53 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 54 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 55 on on ADP IN _ _ _ _ _ 56 four four NUM CD NumType=Card _ _ _ _ 57 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 -acting -act VERB VBG VerbForm=Ger _ _ _ _ 59 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 60 : : PUNCT : _ _ _ _ _ 61 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 62 single single ADJ JJ Degree=Pos _ _ _ _ 63 kappa kappa NOUN NN Number=Sing _ _ _ _ 64 B b NOUN NN Number=Sing _ _ _ _ 65 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 66 , , PUNCT , _ _ _ _ _ 67 two two NUM CD NumType=Card _ _ _ _ 68 purine-rich purine-rich NOUN NN Number=Sing _ _ _ _ 69 binding binding VERB VBG VerbForm=Ger _ _ _ _ 70 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 71 , , PUNCT , _ _ _ _ _ 72 PuB1 Pub1 NOUN NN Number=Sing _ _ _ _ 73 and and CCONJ CC _ _ _ _ _ 74 PuB2 Pub2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 75 , , PUNCT , _ _ _ _ _ 76 and and CCONJ CC _ _ _ _ _ 77 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 78 pets pet NOUN NN Number=Sing _ _ _ _ 79 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 80 . . PUNCT . _ _ _ _ _ # sent_id = 6090 # text = We have now identified a novel cis-acting element within the HIV-2 enhancer, immediately upstream of the kappa B site, designated peri-kappa B. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 now now ADV RB _ _ _ _ _ 4 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 novel novel NOUN NN Number=Sing _ _ _ _ 7 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 -acting -act VERB VBG VerbForm=Ger _ _ _ _ 9 element element NOUN NN Number=Sing _ _ _ _ 10 within within ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 immediately immediately ADV RB _ _ _ _ _ 18 upstream upstream NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 kappa kappa PROPN NNP Number=Sing _ _ _ _ 22 B b PROPN NNP Number=Sing _ _ _ _ 23 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 peri-kappa peri-kappa NOUN NN Number=Sing _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 6091 # text = This site is conserved among isolates of HIV-2 and the closely related simian immunodeficiency virus, and transfection assays show this site to mediate HIV-2 enhancer activation following stimulation of monocytic but not T-cell lines. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 site site NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 conserved conserve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 among among ADP IN _ _ _ _ _ 6 isolates isolate NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 closely closely ADV RB _ _ _ _ _ 14 related relate ADJ JJ Degree=Pos _ _ _ _ 15 simian simian ADJ JJ Degree=Pos _ _ _ _ 16 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 17 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 transfection transfection NOUN NN Number=Sing _ _ _ _ 21 assays assay NOUN NNS Number=Plur _ _ _ _ 22 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 24 site site NOUN NN Number=Sing _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 27 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 2 2 NUM CD NumType=Card _ _ _ _ 30 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 31 activation activation NOUN NN Number=Sing _ _ _ _ 32 following follow VERB VBG VerbForm=Ger _ _ _ _ 33 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 36 but but CCONJ CC _ _ _ _ _ 37 not not ADV RB _ _ _ _ _ 38 T- T- SYM NFP _ _ _ _ SpaceAfter=No 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 6092 # text = This is the first description of an HIV-2 enhancer element which displays such monocyte specificity, and no comparable enhancer element has been clearly defined for HIV-1. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 5 description description NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 displays display VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 such such ADJ JJ Degree=Pos _ _ _ _ 16 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 17 specificity specificity NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 no no DET DT _ _ _ _ _ 21 comparable comparable ADJ JJ Degree=Pos _ _ _ _ 22 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 23 element element NOUN NN Number=Sing _ _ _ _ 24 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 26 clearly clearly ADV RB _ _ _ _ _ 27 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 6093 # text = While a nuclear factor(s) from both peripheral blood monocytes and T cells binds the peri-kappa B site, electrophoretic mobility shift assays suggest that either a different protein binds to this site in monocytes versus T cells or that the protein recognizing this enhancer element undergoes differential modification in monocytes and T cells, thus supporting the transfection data. 1 While while SCONJ IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 s s X AFX _ _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 both both DET DT _ _ _ _ _ 10 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 11 blood blood NOUN NN Number=Sing _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 peri-kappa peri-kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ _ 20 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 23 mobility mobility NOUN NN Number=Sing _ _ _ _ 24 shift shift NOUN NN Number=Sing _ _ _ _ 25 assays assay NOUN NNS Number=Plur _ _ _ _ 26 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 that that SCONJ IN _ _ _ _ _ 28 either either DET DT _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 different different ADJ JJ Degree=Pos _ _ _ _ 31 protein protein NOUN NN Number=Sing _ _ _ _ 32 binds bind NOUN NNS Number=Plur _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 35 site site NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 38 versus versus ADP IN _ _ _ _ _ 39 T T PROPN NNP Number=Sing _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ _ 41 or or CCONJ CC _ _ _ _ _ 42 that that SCONJ IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 protein protein NOUN NN Number=Sing _ _ _ _ 45 recognizing recognize VERB VBG VerbForm=Ger _ _ _ _ 46 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 47 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 48 element element NOUN NN Number=Sing _ _ _ _ 49 undergoes undergo VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 50 differential differential ADJ JJ Degree=Pos _ _ _ _ 51 modification modification NOUN NN Number=Sing _ _ _ _ 52 in in ADP IN _ _ _ _ _ 53 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 54 and and CCONJ CC _ _ _ _ _ 55 T t NOUN NN Number=Sing _ _ _ _ 56 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 57 , , PUNCT , _ _ _ _ _ 58 thus thus ADV RB _ _ _ _ _ 59 supporting support VERB VBG VerbForm=Ger _ _ _ _ 60 the the DET DT Definite=Def|PronType=Art _ _ _ _ 61 transfection transfection NOUN NN Number=Sing _ _ _ _ 62 data data NOUN NN Number=Sing _ _ _ SpaceAfter=No 63 . . PUNCT . _ _ _ _ _ # sent_id = 6094 # text = Further, while specific constitutive binding to the peri-kappa B site is seen in monocytes, stimulation with phorbol esters induces additional, specific binding. 1 Further further ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 while while SCONJ IN _ _ _ _ _ 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 constitutive constitutive NOUN NN Number=Sing _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 peri-kappa peri-kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 site site NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 20 esters ester NOUN NNS Number=Plur _ _ _ _ 21 induces induce ADV RB _ _ _ _ _ 22 additional additional ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 6095 # text = Understanding the monocyte-specific function of the peri-kappa B factor may ultimately provide insight into the different role monocytes and T cells play in HIV pathogenesis. 1 Understanding understand VERB VBG VerbForm=Ger _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 monocyte- monocyte- SYM NFP _ _ _ _ SpaceAfter=No 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 function function NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 peri-kappa peri-kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 may may AUX MD VerbForm=Fin _ _ _ _ 12 ultimately ultimately ADV RB _ _ _ _ _ 13 provide provide VERB VB VerbForm=Inf _ _ _ _ 14 insight insight NOUN NN Number=Sing _ _ _ _ 15 into into ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 different different ADJ JJ Degree=Pos _ _ _ _ 18 role role NOUN NN Number=Sing _ _ _ _ 19 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 play play VERB VB VerbForm=Inf _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 HIV HIV PROPN NNP Number=Sing _ _ _ _ 26 pathogenesis pathogenesis PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6096 # text = Document 003001590 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001590 003001590 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6097 # text = Suppressive effects of anti-inflammatory agents on human endothelial cell activation and induction of heat shock proteins. 1 Suppressive Suppressive ADJ JJ Degree=Pos _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 5 agents agent NOUN NNS Number=Plur _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 heat heat NOUN NN Number=Sing _ _ _ _ 15 shock shock NOUN NN Number=Sing _ _ _ _ 16 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6098 # text = BACKGROUND: Studies from our laboratory have shown that the earliest stages of atherosclerosis may be mediated by an autoimmune reaction against heat shock protein 60 (Hsp60). 1 BACKGROUND background NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Studies study NOUN NNS Number=Plur _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 6 laboratory laboratory NOUN NN Number=Sing _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 earliest earliest ADJ JJS Degree=Sup _ _ _ _ 12 stages stage NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 atherosclerosis atherosclerosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 15 may may AUX MD VerbForm=Fin _ _ _ _ 16 be be AUX VB VerbForm=Inf _ _ _ _ 17 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 autoimmune autoimmune ADJ JJ Degree=Pos _ _ _ _ 21 reaction reaction NOUN NN Number=Sing _ _ _ _ 22 against against ADP IN _ _ _ _ _ 23 heat heat NOUN NN Number=Sing _ _ _ _ 24 shock shock NOUN NN Number=Sing _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ _ 26 60 60 NUM CD NumType=Card _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 Hsp60 Hsp60 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 6099 # text = The interactions of Hsp60-specific T cells with arterial endothelial cells (EC) require expression of both Hsp60 and certain adhesion molecules shown to be induced simultaneously in EC by mechanical and other types of stress. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 interactions interaction NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Hsp60 Hsp60 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 arterial arterial ADJ JJ Degree=Pos _ _ _ _ 10 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 require require VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 both both CCONJ CC _ _ _ _ _ 19 Hsp60 Hsp60 NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 certain certain ADJ JJ Degree=Pos _ _ _ _ 22 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 23 molecules molecule NOUN NNS Number=Plur _ _ _ _ 24 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 be be AUX VB VerbForm=Inf _ _ _ _ 27 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 simultaneously simultaneously ADV RB _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 EC EC PROPN NNP Number=Sing _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 mechanical mechanical ADJ JJ Degree=Pos _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 other other ADJ JJ Degree=Pos _ _ _ _ 35 types type NOUN NNS Number=Plur _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 stress stress NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 6100 # text = Recently, it was shown that suppression of T cell-mediated immune responses by cyclosporin A (CyA) enhanced atherosclerotic lesion formation in mice. 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 suppression suppression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cell cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 immune immune ADJ JJ Degree=Pos _ _ _ _ 14 responses response NOUN NNS Number=Plur _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 17 A a PROPN NNP Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 CyA CyA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 atherosclerotic atherosclerotic ADJ JJ Degree=Pos _ _ _ _ 23 lesion lesion NOUN NN Number=Sing _ _ _ _ 24 formation formation NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 6101 # text = In contrast, aspirin was found to lower the risk of myocardial infarction in men. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 aspirin aspirin NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 lower lower VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 risk risk NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 myocardial myocardial ADJ JJ Degree=Pos _ _ _ _ 13 infarction infarction NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 men man NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 6102 # text = These conflicting observations may be due to different effects of anti-inflammatory agents on adhesion molecule and Hsp expression in EC, respectively. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 conflicting conflicting ADJ JJ Degree=Pos _ _ _ _ 3 observations observation NOUN NNS Number=Plur _ _ _ _ 4 may may AUX MD VerbForm=Fin _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 due due ADP IN _ _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 different different ADJ JJ Degree=Pos _ _ _ _ 9 effects effect NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 12 agents agent NOUN NNS Number=Plur _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 15 molecule molecule NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 Hsp Hsp NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 6103 # text = MATERIAL AND METHODS: 1 MATERIAL material NOUN NN Number=Sing _ _ _ _ 2 AND and CCONJ CC _ _ _ _ _ 3 METHODS method NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ # sent_id = 6104 # text = In the present study, we analyzed the effects of CyA, aspirin, and indomethacin on T cell proliferation using a proliferation assay. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 effects effect NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 CyA Cya PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 aspirin aspirin NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 indomethacin indomethacin ADV RB _ _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 21 using use VERB VBG VerbForm=Ger _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 24 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 6105 # text = To explore the expression of adhesion molecules, monocyte chemoattractant protein-1 (MCP-1), and Hsp60 in human umbilical vein endothelial cells (HUVECs), Northern blot analyses were used. 1 To to PART TO _ _ _ _ _ 2 explore explore VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 7 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 10 chemoattractant chemoattractant NOUN NN Number=Sing _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 -1 -1 NUM CD NumType=Card _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 MCP Mcp NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 Hsp60 Hsp60 NUM CD NumType=Card _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 24 vein vein NOUN NN Number=Sing _ _ _ _ 25 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 32 blot blot NOUN NN Number=Sing _ _ _ _ 33 analyses analysis NOUN NNS Number=Plur _ _ _ _ 34 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 6106 # text = To examine the activation status of the transcription factors nuclear factor kappaB (NF-kappaB) and heat shock factor-1 (HSF-1), electrophoretic mobility shift assays were performed. 1 To to PART TO _ _ _ _ _ 2 examine examine VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 status status NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factors factor NOUN NNS Number=Plur _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 heat heat NOUN NN Number=Sing _ _ _ _ 20 shock shock NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 -1 -1 NUM CD NumType=Card _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 HSF Hsf NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 30 mobility mobility NOUN NN Number=Sing _ _ _ _ 31 shift shift NOUN NN Number=Sing _ _ _ _ 32 assays assay NOUN NNS Number=Plur _ _ _ _ 33 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 performed perform VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 6107 # text = RESULTS: With the exception of indomethacin, the used immunosuppressive and anti-inflammatory agents significantly inhibited T cell proliferation in response to influenza virus antigen in a dose-dependent manner. 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 With with SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 exception exception NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 indomethacin indomethacin NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 used use ADJ JJ Degree=Pos _ _ _ _ 11 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 14 agents agent NOUN NNS Number=Plur _ _ _ _ 15 significantly significantly ADV RB _ _ _ _ _ 16 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 response response NOUN NN Number=Sing _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 influenza influenza ADJ JJ Degree=Pos _ _ _ _ 24 virus virus NOUN NN Number=Sing _ _ _ _ 25 antigen antigen VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 31 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 6108 # text = Interestingly, CyA and indomethacin did not suppress tumor necrosis factor-alpha (TNF-alpha)-induced adhesion molecule expression on HUVECs, whereas aspirin had an inhibitory effect. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 CyA CyA PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 indomethacin indomethacin ADV RB _ _ _ _ _ 6 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 9 tumor tumor NOUN NN Number=Sing _ _ _ _ 10 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 -alpha -alpha NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 - - PUNCT : _ _ _ _ SpaceAfter=No 19 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 21 molecule molecule NOUN NN Number=Sing _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 on on ADP IN _ _ _ _ _ 24 HUVECs Huvecs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 whereas whereas SCONJ IN _ _ _ _ _ 27 aspirin aspirin NOUN NN Number=Sing _ _ _ _ 28 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 31 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 6109 # text = These observations correlated with the modulation of NF-kappaB activity in EC. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 modulation modulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 6110 # text = All agents tested induced expression of Hsp60 6 hr after application. 1 All all DET DT _ _ _ _ _ 2 agents agent NOUN NNS Number=Plur _ _ _ _ 3 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Hsp60 Hsp60 NUM CD NumType=Card _ _ _ _ 8 6 6 NUM CD NumType=Card _ _ _ _ 9 hr hr NOUN NN Number=Sing _ _ _ _ 10 after after ADP IN _ _ _ _ _ 11 application application NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 6111 # text = In addition, aspirin and indomethacin, but not CyA, induced Hsp70 expression in HUVECs that correlated with induction of HSF-1 activity. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 aspirin aspirin ADJ JJ Degree=Pos _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 indomethacin indomethacin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 but but CCONJ CC _ _ _ _ _ 9 not not ADV RB _ _ _ _ _ 10 CyA CyA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 Hsp70 Hsp70 NUM CD NumType=Card _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 correlated correlate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 induction induction NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 HSF HSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 6112 # text = CONCLUSION: 1 CONCLUSION conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 6113 # text = Our results show that the tested agents (except indomethacin) are inhibitors of the T cell-mediated immune response, as expected, that aspirin is an effective suppressor of adhesion molecule expression, and that all three agents can induce Hsp60 in HUVECs. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 agents agent NOUN NNS Number=Plur _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 except except ADP IN _ _ _ _ _ 10 indomethacin indomethacin NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 T T PROPN NNP Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 immune immune ADJ JJ Degree=Pos _ _ _ _ 21 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 as as SCONJ IN _ _ _ _ _ 24 expected expect VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 27 aspirin aspirin NOUN NN Number=Sing _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 effective effective ADJ JJ Degree=Pos _ _ _ _ 31 suppressor suppressor NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 34 molecule molecule NOUN NN Number=Sing _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 that that SCONJ IN _ _ _ _ _ 39 all all DET DT _ _ _ _ _ 40 three three NUM CD NumType=Card _ _ _ _ 41 agents agent NOUN NNS Number=Plur _ _ _ _ 42 can can AUX MD VerbForm=Fin _ _ _ _ 43 induce induce VERB VB VerbForm=Inf _ _ _ _ 44 Hsp60 Hsp60 PROPN NNP Number=Sing _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 HUVECs HUVEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 6114 # text = These data provide the molecular basis for the notion that (1) part of the anti-atherogenic effect of aspirin may be due to the prevention of the adhesion of sensitized T cells to stressed EC; (2) that part of the atherosclerosis-promoting effect of CyA may be due to its potential as an inducer of Hsp60 expression and its inability to down-regulate adhesion molecule expression on EC; and (3) that down-regulation of MCP-1 expression by aspirin may result in decreased recruitment of monocytes into the arterial intima beneath stressed EC. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 provide provide VERB VB VerbForm=Inf _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 6 basis basis NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 notion notion NOUN NN Number=Sing _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 1 1 X LS _ _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 part part NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 anti-atherogenic anti-atherogenic ADJ JJ Degree=Pos _ _ _ _ 18 effect effect NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 aspirin aspirin NOUN NN Number=Sing _ _ _ _ 21 may may AUX MD VerbForm=Fin _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 due due ADP IN _ _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 prevention prevention NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 sensitized sensitize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 T t PROPN NNP Number=Sing _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ _ 34 to to ADP IN _ _ _ _ _ 35 stressed stress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 EC Ec PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 ; ; PUNCT , _ _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 2 2 X LS _ _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 42 part part NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 atherosclerosis atherosclerosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 promoting promote VERB VBG VerbForm=Ger _ _ _ _ 48 effect effect NOUN NN Number=Sing _ _ _ _ 49 of of ADP IN _ _ _ _ _ 50 CyA CyA PROPN NNP Number=Sing _ _ _ _ 51 may may AUX MD VerbForm=Fin _ _ _ _ 52 be be AUX VB VerbForm=Inf _ _ _ _ 53 due due ADP IN _ _ _ _ _ 54 to to ADP IN _ _ _ _ _ 55 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 56 potential potential NOUN NN Number=Sing _ _ _ _ 57 as as ADP IN _ _ _ _ _ 58 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 59 inducer inducer NOUN NN Number=Sing _ _ _ _ 60 of of ADP IN _ _ _ _ _ 61 Hsp60 Hsp60 NUM CD NumType=Card _ _ _ _ 62 expression expression NOUN NN Number=Sing _ _ _ _ 63 and and CCONJ CC _ _ _ _ _ 64 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 65 inability inability NOUN NN Number=Sing _ _ _ _ 66 to to ADP IN _ _ _ _ _ 67 down down ADV RB _ _ _ _ SpaceAfter=No 68 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 69 regulate regulate ADJ JJ Degree=Pos _ _ _ _ 70 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 71 molecule molecule NOUN NN Number=Sing _ _ _ _ 72 expression expression NOUN NN Number=Sing _ _ _ _ 73 on on ADP IN _ _ _ _ _ 74 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 75 ; ; PUNCT , _ _ _ _ _ 76 and and CCONJ CC _ _ _ _ _ 77 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 78 3 3 X LS _ _ _ _ SpaceAfter=No 79 ) ) PUNCT -RRB- _ _ _ _ _ 80 that that SCONJ IN _ _ _ _ _ 81 down down ADV RB _ _ _ _ SpaceAfter=No 82 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 83 regulation regulation NOUN NN Number=Sing _ _ _ _ 84 of of ADP IN _ _ _ _ _ 85 MCP MCP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 86 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 87 1 1 NUM CD NumType=Card _ _ _ _ 88 expression expression NOUN NN Number=Sing _ _ _ _ 89 by by ADP IN _ _ _ _ _ 90 aspirin aspirin NOUN NN Number=Sing _ _ _ _ 91 may may AUX MD VerbForm=Fin _ _ _ _ 92 result result VERB VB VerbForm=Inf _ _ _ _ 93 in in ADP IN _ _ _ _ _ 94 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 95 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 96 of of ADP IN _ _ _ _ _ 97 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 98 into into ADP IN _ _ _ _ _ 99 the the DET DT Definite=Def|PronType=Art _ _ _ _ 100 arterial arterial ADJ JJ Degree=Pos _ _ _ _ 101 intima intima NOUN NN Number=Sing _ _ _ _ 102 beneath beneath ADP IN _ _ _ _ _ 103 stressed stress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 104 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 105 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6115 # text = Document 003001595 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001595 003001595 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6116 # text = Distinct roles of the molecular chaperone hsp90 in modulating dioxin receptor function via the basic helix-loop-helix and PAS domains. 1 Distinct distinct ADJ JJ Degree=Pos _ _ _ _ 2 roles role NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 6 chaperone chaperone NOUN NN Number=Sing _ _ _ _ 7 hsp90 hsp90 NUM CD NumType=Card _ _ _ _ 8 in in SCONJ IN _ _ _ _ _ 9 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 10 dioxin dioxin ADJ JJ Degree=Pos _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 function function NOUN NN Number=Sing _ _ _ _ 13 via via ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 basic basic ADJ JJ Degree=Pos _ _ _ _ 16 helix helix NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 -loop -loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 helix helix NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 PAS Pas NOUN NN Number=Sing _ _ _ _ 22 domains domain NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6117 # text = The intracellular dioxin receptor mediates signal transduction by dioxin and functions as a ligand-activated transcription factor. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 3 dioxin dioxin NOUN NN Number=Sing _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ _ 5 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 signal signal ADJ JJ Degree=Pos _ _ _ _ 7 transduction transduction NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 dioxin dioxin NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 functions function NOUN NNS Number=Plur _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 6118 # text = It contains a basic helix-loop-helix (bHLH) motif contiguous with a Per-Arnt-Sim (PAS) homology region. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 basic basic ADJ JJ Degree=Pos _ _ _ _ 5 helix-loop helix-loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 helix helix NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 bHLH bHLH NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 motif motif NOUN NN Number=Sing _ _ _ _ 12 contiguous contiguous ADJ JJ Degree=Pos _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 Per- per- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 Arnt Arnt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 Sim Sim PROPN NNP Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 PAS PAS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 homology homology NOUN NN Number=Sing _ _ _ _ 23 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 6119 # text = In extracts from nonstimulated cells the receptor is recovered in an inducible cytoplasmic form associated with the 90-kDa heat shock protein (hsp90), a molecular chaperone. 1 In in ADP IN _ _ _ _ _ 2 extracts extract NOUN NNS Number=Plur _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 nonstimulated nonstimulate ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 recovered recover VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 13 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 14 form form NOUN NN Number=Sing _ _ _ _ 15 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 90 90 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kDa kDa NOUN NN Number=Sing _ _ _ _ 21 heat heat NOUN NN Number=Sing _ _ _ _ 22 shock shock NOUN NN Number=Sing _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 hsp90 hsp90 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 30 chaperone chaperone NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 6120 # text = We have reconstituted ligand-dependent activation of the receptor to a DNA-binding form by using the dioxin receptor and its bHLH-PAS partner factor 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 reconstituted reconstitute VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 binding binding VERB VBG VerbForm=Ger _ _ _ _ 16 form form NOUN NN Number=Sing _ _ _ _ 17 by by SCONJ IN _ _ _ _ _ 18 using use VERB VBG VerbForm=Ger _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 dioxin dioxin NOUN NN Number=Sing _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 bHLH bHLh NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 PAS Pas NOUN NN Number=Sing _ _ _ _ 27 partner partner NOUN NN Number=Sing _ _ _ _ 28 factor factor NOUN NN Number=Sing _ _ _ _ # sent_id = 6121 # text = Arnt expressed by in vitro translation in reticulocyte lysate. 1 Arnt Arnt NOUN NN Number=Sing _ _ _ _ 2 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 6 translation translation NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 reticulocyte reticulocyte ADJ JJ Degree=Pos _ _ _ _ 9 lysate lysate NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 6122 # text = Deletion of the PAS domain of the receptor resulted in constitutive dimerization with Arnt. 1 Deletion Deletion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 PAS PAS PROPN NNP Number=Sing _ _ _ _ 5 domain domain NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 12 dimerization dimerization NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 Arnt Arnt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 6123 # text = In contrast, this receptor mutant showed low levels of xenobiotic response element-binding activity, indicating that the PAS domain may be important for DNA-binding affinity and/or specificity of the receptor. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ _ 6 mutant mutant NOUN NN Number=Sing _ _ _ _ 7 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 low low ADJ JJ Degree=Pos _ _ _ _ 9 levels level NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 xenobiotic xenobiotic ADJ JJ Degree=Pos _ _ _ _ 12 response response NOUN NN Number=Sing _ _ _ _ 13 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 binding bind VERB VBG VerbForm=Ger _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 PAS Pas NOUN NN Number=Sing _ _ _ _ 22 domain domain NOUN NN Number=Sing _ _ _ _ 23 may may AUX MD VerbForm=Fin _ _ _ _ 24 be be AUX VB VerbForm=Inf _ _ _ _ 25 important important ADJ JJ Degree=Pos _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 binding binding VERB VBG VerbForm=Ger _ _ _ _ 30 affinity affinity NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ SpaceAfter=No 32 / / PUNCT , _ _ _ _ SpaceAfter=No 33 or or CCONJ CC _ _ _ _ _ 34 specificity specificity NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 6124 # text = It was not possible to reconstitute dioxin receptor function with proteins expressed in wheat germ lysate. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 not not PART RB _ _ _ _ _ 4 possible possible ADJ JJ Degree=Pos _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 reconstitute reconstitute VERB VB VerbForm=Inf _ _ _ _ 7 dioxin dioxin ADP IN _ _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 function function NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 wheat wheat NOUN NN Number=Sing _ _ _ _ 15 germ germ NOUN NN Number=Sing _ _ _ _ 16 lysate lysate NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 6125 # text = In line with these observations, reticulocyte lysate but not wheat germ lysate promoted the association of de novo synthesized dioxin receptor with hsp90. 1 In in ADP IN _ _ _ _ _ 2 line line NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 observations observation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 reticulocyte reticulocyte VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 8 lysate lysate NOUN NN Number=Sing _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 wheat wheat VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 12 germ germ NOUN NN Number=Sing _ _ _ _ 13 lysate lysate NOUN NN Number=Sing _ _ _ _ 14 promoted promote VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 association association NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 de de PROPN NNP Number=Sing _ _ _ _ 19 novo novo ADV RB _ _ _ _ _ 20 synthesized synthesize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 dioxin dioxin ADJ JJ Degree=Pos _ _ _ _ 22 receptor receptor NOUN NN Number=Sing _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 hsp90 hsp90 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 6126 # text = At least two distinct domains of the receptor mediated interaction with hsp90: the ligand-binding domain located within the PAS region and, surprisingly, the bHLH domain. 1 At at ADV RB _ _ _ _ _ 2 least least ADV RBS Degree=Sup _ _ _ _ 3 two two NUM CD NumType=Card _ _ _ _ 4 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 5 domains domains NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 interaction interaction NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 hsp90 hsp90 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 : : PUNCT : _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 domain domain NOUN NN Number=Sing _ _ _ _ 19 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 within within ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 PAS Pas PROPN NNP Number=Sing _ _ _ _ 23 region region NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 surprisingly surprisingly ADV RB _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 bHLH bhlh ADJ JJ Degree=Pos _ _ _ _ 30 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 6127 # text = Whereas ligand-binding activity correlated with association with hsp90, bHLH-hsp90 interaction appeared to be important for DNA-binding activity but not for dimerization of the receptor. 1 Whereas whereas SCONJ IN _ _ _ _ _ 2 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 association association NOUN NN Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 hsp90 hsp90 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 bHLH bHLh NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 hsp90 hsp90 NUM CD NumType=Card _ _ _ _ 15 interaction interaction NOUN NN Number=Sing _ _ _ _ 16 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 important important ADJ JJ Degree=Pos _ _ _ _ 20 for for SCONJ IN _ _ _ _ _ 21 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 binding binding VERB VBG VerbForm=Ger _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ _ 25 but but CCONJ CC _ _ _ _ _ 26 not not ADV RB _ _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 dimerization dimerization NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 6128 # text = Several distinct roles for hsp90 in modulating dioxin receptor function are therefore likely: correct folding of the ligand-binding domain, interference with Arnt heterodimerization, and folding of a DNA-binding conformation of the bHLH domain. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 3 roles role NOUN NNS Number=Plur _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 hsp90 hsp90 NUM CD NumType=Card _ _ _ _ 6 in in SCONJ IN _ _ _ _ _ 7 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 8 dioxin dioxin ADJ JJ Degree=Pos _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ _ 10 function function NOUN NN Number=Sing _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 therefore therefore ADV RB _ _ _ _ _ 13 likely likely ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 : : PUNCT : _ _ _ _ _ 15 correct correct ADJ JJ Degree=Pos _ _ _ _ 16 folding folding NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 binding binding VERB VBG VerbForm=Ger _ _ _ _ 22 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 interference interference NOUN NN Number=Sing _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 Arnt Arnt PROPN NNP Number=Sing _ _ _ _ 27 heterodimerization heterodimerization NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 folding folding NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 binding bind VERB VBG VerbForm=Ger _ _ _ _ 36 conformation conformation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 bHLH bHLH ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 40 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 6129 # text = Thus, the dioxin receptor system provides a complex and interesting model of the regulation of transcription factors by hsp90. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 dioxin dioxin ADJ JJ Degree=Pos _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ _ 6 system system NOUN NN Number=Sing _ _ _ _ 7 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 complex complex ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 interesting interesting ADJ JJ Degree=Pos _ _ _ _ 12 model model NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 regulation regulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 factors factor NOUN NNS Number=Plur _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 hsp90 hsp90 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6130 # text = Document 003001600 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001600 003001600 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6131 # text = New immunosuppressive drug PNU156804 blocks IL-2-dependent proliferation and NF-kappa B and AP-1 activation. 1 New new ADJ JJ Degree=Pos _ _ _ _ 2 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 3 drug drug NOUN NN Number=Sing _ _ _ _ 4 PNU156804 PNU156804 NOUN NN Number=Sing _ _ _ _ 5 blocks block NOUN NNS Number=Plur _ _ _ _ 6 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 11 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6132 # text = We had previously shown that the drug undecylprodigiosin (UP) blocks human lymphocyte proliferation in vitro. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 drug drug NOUN NN Number=Sing _ _ _ _ 8 undecylprodigiosin undecylprodigiosin NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 UP UP NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 blocks block NOUN NNS Number=Plur _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 15 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 6133 # text = We have now investigated the mechanism of action of a new analogue of UP, PNU156804, which shows a more favorable activity profile than UP in mice. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 now now ADV RB _ _ _ _ _ 4 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 action action NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 new new ADJ JJ Degree=Pos _ _ _ _ 12 analogue analogue NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 UP UP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 PNU156804 PNU156804 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 shows show VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 more more ADV RBR _ _ _ _ _ 22 favorable favorable ADJ JJ Degree=Pos _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 profile profile NOUN NN Number=Sing _ _ _ _ 25 than than ADP IN _ _ _ _ _ 26 UP up NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 6134 # text = We demonstrate here that the biological effect of PNU156804 in vitro is indistinguishable from UP: PNU156804 blocks human T cell proliferation in mid-late G1, as determined by cell cycle analysis, expression of cyclins, and cyclin-dependent kinases and retinoblastoma phosphorylation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 biological biological ADJ JJ Degree=Pos _ _ _ _ 7 effect effect NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 PNU156804 PNU156804 NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 vitro vitro NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 indistinguishable indistinguishable ADJ JJ Degree=Pos _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 UP Up NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 : : PUNCT : _ _ _ _ _ 17 PNU156804 PNU156804 NUM CD NumType=Card _ _ _ _ 18 blocks block NOUN NNS Number=Plur _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 mid-late mid-late ADJ JJ Degree=Pos _ _ _ _ 25 G1 G1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 as as SCONJ IN _ _ _ _ _ 28 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 cycle cycle NOUN NN Number=Sing _ _ _ _ 32 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 cyclins cyclin NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 cyclin cyclin NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 42 kinases kinase NOUN NNS Number=Plur _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 retinoblastoma retinoblastoma NOUN NN Number=Sing _ _ _ _ 45 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 6135 # text = In addition, we show that PNU156804 does not block significantly the induction of either IL-2 or IL-2R alpha- and gamma-chains but inhibits IL-2-dependent T cell proliferation. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 PNU156804 PNU156804 PROPN NNP Number=Sing _ _ _ _ 8 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 block block VERB VB VerbForm=Inf _ _ _ _ 11 significantly significantly ADV RB _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 induction induction NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 either either CCONJ CC _ _ _ _ _ 16 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2R 2r NOUN NN Number=Sing _ _ _ _ 23 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 chains chain NOUN NNS Number=Plur _ _ _ _ 29 but but CCONJ CC _ _ _ _ _ 30 inhibits inhibits NOUN NNS Number=Plur _ _ _ _ 31 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 36 T t NOUN NN Number=Sing _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 6136 # text = We have investigated several molecular pathways that are known to be activated by IL-2 in T cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 several several ADJ JJ Degree=Pos _ _ _ _ 5 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 6 pathways pathway NOUN NNS Number=Plur _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 6137 # text = We show that PNU156804 does not inhibit c-myc and bcl-2 mRNA induction. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 PNU156804 PNU156804 PROPN NNP Number=Sing _ _ _ _ 5 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 8 c- c- SYM NFP _ _ _ _ SpaceAfter=No 9 myc myc NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 15 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 6138 # text = On the other hand, PNU156804 efficiently inhibits the activation of the NF-kappa B and AP-1 transcription factors. 1 On on ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 hand hand NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 PNU156804 PNU156804 PROPN NNP Number=Sing _ _ _ _ 7 efficiently efficiently ADV RB _ _ _ _ _ 8 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 6139 # text = PNU156804 inhibition of NF-kappa B activation is due to the inhibition of the degradation of I kappa B-alpha and I kappa B-beta. 1 PNU156804 PNU156804 NUM CD NumType=Card _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 due due ADP IN _ _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 degradation degradation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 19 kappa kappa X FW Foreign=Yes _ _ _ _ 20 B- B- X GW _ _ _ _ SpaceAfter=No 21 alpha alpha X FW Foreign=Yes _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ 25 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 6140 # text = PNU156804 action is restricted to some signaling pathways; it does not affect NF-kappa B activation by PMA in T cells but blocks that induced by CD40 cross-linking in B lymphocytes. 1 PNU156804 PNU156804 NOUN NN Number=Sing _ _ _ _ 2 action action NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 restricted restrict VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 some some DET DT _ _ _ _ _ 7 signaling signaling NOUN NN Number=Sing _ _ _ _ 8 pathways pathways NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 ; ; PUNCT , _ _ _ _ _ 10 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 11 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 affect affect VERB VB VerbForm=Inf _ _ _ _ 14 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 PMA PMA PROPN NNP Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 but but CCONJ CC _ _ _ _ _ 25 blocks block NOUN NNS Number=Plur _ _ _ _ 26 that that PRON WDT PronType=Rel _ _ _ _ 27 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 30 cross cross PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 B b ADJ JJ Degree=Pos _ _ _ _ 34 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 6141 # text = We conclude that the prodigiosin family of immunosuppressants is a new family of molecules that show a novel target specificity clearly distinct from that of other immunosuppressive drugs such as cyclosporin A, FK506, and rapamycin. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 prodigiosin prodigiosin ADJ JJ Degree=Pos _ _ _ _ 6 family family NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 immunosuppressants immunosuppressant NOUN NNS Number=Plur _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 new new ADJ JJ Degree=Pos _ _ _ _ 12 family family NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 molecules molecule NOUN NNS Number=Plur _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 novel novel NOUN NN Number=Sing _ _ _ _ 19 target target NOUN NN Number=Sing _ _ _ _ 20 specificity specificity NOUN NN Number=Sing _ _ _ _ 21 clearly clearly ADV RB _ _ _ _ _ 22 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 other other ADJ JJ Degree=Pos _ _ _ _ 27 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 28 drugs drug NOUN NNS Number=Plur _ _ _ _ 29 such such ADJ JJ Degree=Pos _ _ _ _ 30 as as ADP IN _ _ _ _ _ 31 cyclosporin cyclosporin ADP IN _ _ _ _ _ 32 A a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 FK506 FK506 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 rapamycin rapamycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6142 # text = Document 003001605 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001605 003001605 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6143 # text = Interaction of transcription factors RFX1 and MIBP1 with the gamma motif of the negative regulatory element of the hepatitis B virus core promoter. 1 Interaction interaction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factors factor NOUN NNS Number=Plur _ _ _ _ 5 RFX1 RFX1 PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 MIBP1 MIBP1 PROPN NNP Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 gamma gamma NOUN NN Number=Sing _ _ _ _ 11 motif motif NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 negative negative ADJ JJ Degree=Pos _ _ _ _ 15 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 16 element element NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 hepatitis hepatitis NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 virus virus NOUN NN Number=Sing _ _ _ _ 22 core core NOUN NN Number=Sing _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6144 # text = The negative regulatory element (NRE) of the hepatitis B virus (HBV) core promoter contains three subregions which act synergistically to suppress core promoter activity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 negative negative ADJ JJ Degree=Pos _ _ _ _ 3 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 4 element element NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 NRE NRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 hepatitis hepatitis NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 virus virus NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 HBV HBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 core core ADJ JJ Degree=Pos _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 three three NUM CD NumType=Card _ _ _ _ 20 subregions subregion NOUN NNS Number=Plur _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 act act VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 synergistically synergistically ADV RB _ _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 26 core core NOUN NN Number=Sing _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 6145 # text = One of these subregions, NRE gamma, is active in both HeLa cervical carcinoma cells and Huh7 hepatoma cells and was found to be bound by a protein factor present in both cell types. 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 subregions subregion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 NRE NRE PROPN NNP Number=Sing _ _ _ _ 7 gamma gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 active active ADJ JJ Degree=Pos _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 both both DET DT _ _ _ _ _ 13 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 14 cervical cervical ADJ JJ Degree=Pos _ _ _ _ 15 carcinoma carcinoma NOUN NN Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 Huh7 Huh7 NUM CD NumType=Card _ _ _ _ 19 hepatoma hepatoma NOUN NN Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=1|Tense=Past|VerbForm=Fin _ _ _ _ 23 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 be be AUX VB VerbForm=Inf _ _ _ _ 26 bound bound ADJ JJ Degree=Pos _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ _ 31 present present ADJ JJ Degree=Pos _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 both both DET DT _ _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 6146 # text = Here we show that the transcription factor RFX1 can bind to NRE gamma and transactivate the core promoter through this site. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 RFX1 rfx1 NOUN NN Number=Sing _ _ _ _ 9 can can AUX MD VerbForm=Fin _ _ _ _ 10 bind bind VERB VB VerbForm=Inf _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 NRE NRE VERB VB VerbForm=Inf _ _ _ _ 13 gamma gamma NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 transactivate transactivate VERB VB VerbForm=Inf _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 core core NOUN NN Number=Sing _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ _ 19 through through ADP IN _ _ _ _ _ 20 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 21 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 6147 # text = Mutations which abrogated the gene-suppressive activity of NRE gamma prevented RFX1 from binding to NRE gamma. 1 Mutations Mutation NOUN NNS Number=Plur _ _ _ _ 2 which which PRON WDT PronType=Rel _ _ _ _ 3 abrogated abrogate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 suppressive suppressive ADJ JJ Degree=Pos _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NRE NRE PROPN NNP Number=Sing _ _ _ _ 11 gamma gamma PROPN NNP Number=Sing _ _ _ _ 12 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 RFX1 RFX1 PROPN NNP Number=Sing _ _ _ _ 14 from from SCONJ IN _ _ _ _ _ 15 binding bind VERB VBG VerbForm=Ger _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 NRE NRE PROPN NNP Number=Sing _ _ _ _ 18 gamma gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 6148 # text = In addition, RFX1 can bind simultaneously, most likely as a heterodimer, with the transcription factor MIBP1 to NRE gamma. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 RFX1 RFX1 PROPN NNP Number=Sing _ _ _ _ 5 can can AUX MD VerbForm=Fin _ _ _ _ 6 bind bind VERB VB VerbForm=Inf _ _ _ _ 7 simultaneously simultaneously ADV RB _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 most most ADV RBS _ _ _ _ _ 10 likely likely ADV RB _ _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 heterodimer heterodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 MIBP1 Mibp1 PROPN NNP Number=Sing _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 NRE Nre VERB VB VerbForm=Inf _ _ _ _ 22 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 6149 # text = In the absence of a cloned MIBP1 gene for further studies, we hypothesize that RFX1 acts with MIBP1 to negatively regulate the core promoter activity through the NRE gamma site. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 absence absence NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 MIBP1 Mibp1 NOUN NN Number=Sing _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 further further ADJ JJ Degree=Pos _ _ _ _ 11 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 hypothesize hypothesize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 RFX1 RFX1 PROPN NNP Number=Sing _ _ _ _ 17 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 MIBP1 Mibp1 PROPN NNP Number=Sing _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 negatively negatively ADV RB _ _ _ _ _ 22 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 core core NOUN NN Number=Sing _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ _ 26 activity activity NOUN NN Number=Sing _ _ _ _ 27 through through ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 NRE NRE PROPN NNP Number=Sing _ _ _ _ 30 gamma gamma NOUN NN Number=Sing _ _ _ _ 31 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 6150 # text = The ability of RFX1 to transactivate the core promoter raises the possibility that RFX1 may play a dual role in regulating HBV gene expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ability ability NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 RFX1 RFX1 PROPN NNP Number=Sing _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 transactivate transactivate VERB VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 core core NOUN NN Number=Sing _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 raises rais VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 possibility possibility NOUN NN Number=Sing _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 RFX1 RFX1 PROPN NNP Number=Sing _ _ _ _ 15 may may AUX MD VerbForm=Fin _ _ _ _ 16 play play VERB VB VerbForm=Inf _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 dual dual ADJ JJ Degree=Pos _ _ _ _ 19 role role NOUN NN Number=Sing _ _ _ _ 20 in in SCONJ IN _ _ _ _ _ 21 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 22 HBV HBV PROPN NNP Number=Sing _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6151 # text = Document 003001611 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001611 003001611 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6152 # text = Danazol decreases transcription of estrogen receptor gene in human monocytes. 1 Danazol Danazol PROPN NNP Number=Sing _ _ _ _ 2 decreases decrease VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 estrogen estrogen NUM CD NumType=Card _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6153 # text = 1. 1 1 1 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ # sent_id = 6154 # text = Administration of danazol for over one month reduced the levels of estrogen receptor (ER) and its mRNA to approximately 50 and 20%, respectively in monocytes. 1 Administration Administration NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 danazol danazol NOUN NN Number=Sing _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 over over ADV RB _ _ _ _ _ 6 one one NUM CD NumType=Card _ _ _ _ 7 month month NOUN NN Number=Sing _ _ _ _ 8 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 levels level NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 estrogen estrogen NOUN NN Number=Sing _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 ER er NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 19 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 approximately approximately VERB VB VerbForm=Inf _ _ _ _ 23 50 50 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 respectively respectively ADV RB _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 6155 # text = 2. 1 2 2 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ # sent_id = 6156 # text = Danazol did not alter the degradation rate of ER mRNA in monocytes. 1 Danazol Danazol PROPN NNP Number=Sing _ _ _ _ 2 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 not not PART RB _ _ _ _ _ 4 alter alter VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 degradation degradation NOUN NN Number=Sing _ _ _ _ 7 rate rate NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 ER er NOUN NN Number=Sing _ _ _ _ 10 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 6157 # text = 3. Danazol decreased the transcription rate of ER gene to approximately 50% in monocytes in a run-on assay. 1 3 3 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ 3 Danazol Danazol PROPN NNP Number=Sing _ _ _ _ 4 decreased decrease VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 rate rate NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 ER er NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 approximately approximately ADV RB _ _ _ _ _ 13 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 % % SYM NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 run run NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 on on ADP IN _ _ _ _ _ 22 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 6158 # text = 4. Danazol may release estrogen predominance via the reduction of transcription for ER gene, which leads to the reduction of ER mRNA and ER expressions in monocytes. 1 4 4 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ 3 Danazol Danazol PROPN NNP Number=Sing _ _ _ _ 4 may may AUX MD VerbForm=Fin _ _ _ _ 5 release release VERB VB VerbForm=Inf _ _ _ _ 6 estrogen estrogen NUM CD NumType=Card _ _ _ _ 7 predominance predominance NOUN NN Number=Sing _ _ _ _ 8 via via ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 reduction reduction NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 ER er NOUN NN Number=Sing _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 reduction reduction NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 ER er NOUN NN Number=Sing _ _ _ _ 24 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 ER er NOUN NN Number=Sing _ _ _ _ 27 expressions expression NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6159 # text = Document 003001613 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001613 003001613 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6160 # text = Cross-linking of CD30 induces HIV expression in chronically infected T cells. 1 Cross cross ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 linking linking NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 CD30 CD30 NUM CD NumType=Card _ _ _ _ 6 induces induce NOUN NNS Number=Plur _ _ _ _ 7 HIV haHive AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 chronically chronically ADV RB _ _ _ _ _ 11 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6161 # text = CD30, a member of the tumor necrosis factor (TNF) receptor family, is expressed constitutively on the surface of the human T cell line ACH-2, which is chronically infected with human immunodeficiency virus type-1 (HIV)-1. 1 CD30 CD30 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 member member NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 tumor tumor NOUN NN Number=Sing _ _ _ _ 8 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ _ 14 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 constitutively constitutively ADV RB _ _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 surface surface NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 line line NOUN NN Number=Sing _ _ _ _ 28 ACH ACh NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 which which PRON WDT PronType=Int _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 chronically chronically ADV RB _ _ _ _ _ 35 infected infect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 human human ADJ JJ Degree=Pos _ _ _ _ 38 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 39 virus virus NOUN NN Number=Sing _ _ _ _ 40 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT , _ _ _ _ SpaceAfter=No 42 1 1 NUM CD NumType=Card _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 46 - - SYM SYM _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 6162 # text = We demonstrate that cross-linking CD30 with an anti-CD30-specific monoclonal antibody, which mimics the described biological activities of the CD30 ligand (CD30L), results in HIV expression. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 cross cross PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 6 CD30 CD30 PROPN NNP Number=Sing _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 anti-CD30 anti-CD30 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 11 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 12 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 mimics mimics VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 biological biological ADJ JJ Degree=Pos _ _ _ _ 19 activities activity NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 CD30 CD30 PROPN NNP Number=Sing _ _ _ _ 23 ligand ligand NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 CD30L Cd30l NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 results result NOUN NNS Number=Plur _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 HIV HIV PROPN NNP Number=Sing _ _ _ _ 31 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 6163 # text = CD30 cross-linking does not alter proliferation of ACH-2 cells and the induction of HIV expression is not mediated by endogenous TNF alpha/beta. 1 CD30 CD30 NUM CD NumType=Card _ _ _ _ 2 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 -linking -linking NOUN NN Number=Sing _ _ _ _ 4 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 alter alter VERB VB VerbForm=Inf _ _ _ _ 7 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 ACH ACH DET DT _ _ _ _ SpaceAfter=No 10 - - SYM SYM _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 induction induction NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 HIV Hiv NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 24 TNF TNF NOUN NN Number=Sing _ _ _ _ 25 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 / / PUNCT , _ _ _ _ SpaceAfter=No 27 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 6164 # text = Furthermore, cross-linking of CD30 leads to NF-kappa B activation and enhanced HIV transcription. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 cross cross VERB VB Mood=Imp|VerbForm=Fin _ _ _ SpaceAfter=No 4 -linking -linking NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 CD30 CD30 NUM CD NumType=Card _ _ _ _ 7 leads lead NOUN NNS Number=Plur _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 HIV HIV NOUN NN Number=Sing _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 6165 # text = Thus, CD30-CD30L interactions mediate the induction of HIV expression by a kappa B-dependent pathway that is independent of TNF. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 CD30-CD30L Cd30-cd30l ADJ JJ Degree=Pos _ _ _ _ 4 interactions interaction NOUN NNS Number=Plur _ _ _ _ 5 mediate mediate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 induction induction NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 HIV HIV NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 17 pathway pathway NOUN NN Number=Sing _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 independent independent ADJ JJ Degree=Pos _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 6166 # text = This mechanism may be important in the activation of HIV expression from latently infected CD4+ 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 3 may may AUX MD VerbForm=Fin _ _ _ _ 4 be be AUX VB VerbForm=Inf _ _ _ _ 5 important important ADJ JJ Degree=Pos _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 HIV Hiv PROPN NNP Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 latently latently ADV RB _ _ _ _ _ 14 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 + + SYM NFP _ _ _ _ _ # sent_id = 6167 # text = T cells, especially in lymphoid organs where cell to cell contact is conducive to receptor-ligand interactions. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 especially especially ADV RB _ _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 7 organs organ NOUN NNS Number=Plur _ _ _ _ 8 where where ADV WRB PronType=Rel _ _ _ _ 9 cell cell VERB VB VerbForm=Inf _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 cell cell VERB VB VerbForm=Inf _ _ _ _ 12 contact contact NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 conducive conducive ADJ JJ Degree=Pos _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 receptor receptor VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 ligand ligand NOUN NN Number=Sing _ _ _ _ 19 interactions interaction NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6168 # text = Document 003001619 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001619 003001619 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6169 # text = An intricate arrangement of binding sites for the Ets family of transcription factors regulates activity of the alpha 4 integrin gene promoter. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 intricate intricate ADJ JJ Degree=Pos _ _ _ _ 3 arrangement arrangement NOUN NN Number=Sing _ _ _ _ 4 of of SCONJ IN _ _ _ _ _ 5 binding bind VERB VBG VerbForm=Ger _ _ _ _ 6 sites site NOUN NNS Number=Plur _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 Ets ets PROPN NNPS Number=Plur _ _ _ _ 10 family family NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factors factor NOUN NNS Number=Plur _ _ _ _ 14 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 alpha alpha NOUN NN Number=Sing _ _ _ _ 19 4 4 NUM CD NumType=Card _ _ _ _ 20 integrin integrin ADJ JJ Degree=Pos _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6170 # text = alpha 4 integrins mediate cell-cell and cell-extracellular matrix interactions that are critical for maturation and function of the immune system as well as differentiation of skeletal muscle. 1 alpha alpha ADV RB _ _ _ _ _ 2 4 4 NUM CD NumType=Card _ _ _ _ 3 integrins integrin NOUN NNS Number=Plur _ _ _ _ 4 mediate mediate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 12 matrix matrix NOUN NN Number=Sing _ _ _ _ 13 interactions interaction NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 critical critical ADJ JJ Degree=Pos _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 maturation maturation NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 function function NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 immune immune ADJ JJ Degree=Pos _ _ _ _ 24 system system NOUN NN Number=Sing _ _ _ _ 25 as as ADV RB _ _ _ _ _ 26 well well ADV RB Degree=Pos _ _ _ _ 27 as as ADP IN _ _ _ _ _ 28 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 skeletal skeletal ADJ JJ Degree=Pos _ _ _ _ 31 muscle muscle NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 6171 # text = Here we examine molecular mechanisms controlling the pattern of alpha 4 expression. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 examine examine VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 5 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 6 controlling controlle VERB VBG VerbForm=Ger _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 pattern pattern NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 alpha alpha ADV RB _ _ _ _ _ 11 4 4 NUM CD NumType=Card _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 6172 # text = The activity of constructs containing 5' deletion mutants of the alpha 4 gene promoter was compared in transfection assays into cell lines that express alpha 4 and cell lines that do not. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activity activity NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 constructs construct NOUN NNS Number=Plur _ _ _ _ 5 containing contain VERB VBG VerbForm=Ger _ _ _ _ 6 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ' ' PUNCT `` _ _ _ _ _ 8 deletion deletion NOUN NN Number=Sing _ _ _ _ 9 mutants mutant NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 alpha alpha NOUN NN Number=Sing _ _ _ _ 13 4 4 NUM CD NumType=Card _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 compared compare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 transfection transfection NOUN NN Number=Sing _ _ _ _ 20 assays assays ADV RB _ _ _ _ _ 21 into into ADP IN _ _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 lines line NOUN NNS Number=Plur _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 alpha alpha ADV RB _ _ _ _ _ 27 4 4 NUM CD NumType=Card _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 lines line NOUN NNS Number=Plur _ _ _ _ 31 that that PRON WDT PronType=Rel _ _ _ _ 32 do do VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 not not PART RB _ _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 6173 # text = The sequence between position -42 and -76 base pairs (bp) was required for efficient transcription in cells that express alpha 4, but it showed no activity in HeLa cells, which do not express alpha 4. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 sequence sequence NOUN NN Number=Sing _ _ _ _ 3 between between ADP IN _ _ _ _ _ 4 position position NOUN NN Number=Sing _ _ _ _ 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 42 42 NUM CD NumType=Card _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 - - SYM SYM _ _ _ _ SpaceAfter=No 9 76 76 NUM CD NumType=Card _ _ _ _ 10 base base NOUN NN Number=Sing _ _ _ _ 11 pairs pair NOUN NNS Number=Plur _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 bp bp NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 alpha alpha ADV RB _ _ _ _ _ 25 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 but but CCONJ CC _ _ _ _ _ 28 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 29 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 no no DET DT _ _ _ _ _ 31 activity activity NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 which which PRON WDT PronType=Rel _ _ _ _ 37 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 38 not not PART RB _ _ _ _ _ 39 express express VERB VB VerbForm=Inf _ _ _ _ 40 alpha alpha ADP IN _ _ _ _ _ 41 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 6174 # text = Three binding sites for the Ets family of transcription factors are found in this region: two adjacent sites at positions -50 and -54 bp and a more 5' site at position -67 bp. 1 Three three VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 binding binding VERB VBG VerbForm=Ger _ _ _ _ 3 sites site NOUN NNS Number=Plur _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 Ets ets PROPN NNPS Number=Plur _ _ _ _ 7 family family NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 15 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 : : PUNCT : _ _ _ _ _ 17 two two NUM CD NumType=Card _ _ _ _ 18 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 19 sites site NOUN NNS Number=Plur _ _ _ _ 20 at at ADP IN _ _ _ _ _ 21 positions position NOUN NNS Number=Plur _ _ _ _ 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 50 50 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 - - SYM SYM _ _ _ _ SpaceAfter=No 26 54 54 NUM CD NumType=Card _ _ _ _ 27 bp bp NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 more more ADJ JJR Degree=Cmp _ _ _ _ 31 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 ' ' PUNCT `` _ _ _ _ _ 33 site site NOUN NN Number=Sing _ _ _ _ 34 at at ADP IN _ _ _ _ _ 35 position position NOUN NN Number=Sing _ _ _ _ 36 - - PUNCT , _ _ _ _ SpaceAfter=No 37 67 67 NUM CD NumType=Card _ _ _ _ 38 bp bp NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 6175 # text = Using a series of constructs containing deletions and mutations in this region, we found that the 3'-most site alone was sufficient for binding GA-binding protein alpha (GABP alpha)/GABP beta and for a low level of transcriptional activation. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 series series NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 constructs constructs NOUN NNS Number=Plur _ _ _ _ 6 containing contain VERB VBG VerbForm=Ger _ _ _ _ 7 deletions deletion NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 mutations mutation NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 12 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 15 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 most most ADJ JJS Degree=Sup _ _ _ _ 22 site site NOUN NN Number=Sing _ _ _ _ 23 alone alone ADV RB _ _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 26 for for SCONJ IN _ _ _ _ _ 27 binding bind VERB VBG VerbForm=Ger _ _ _ _ 28 GA ga NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 binding binding VERB VBG VerbForm=Ger _ _ _ _ 31 protein protein NOUN NN Number=Sing _ _ _ _ 32 alpha alpha NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 GABP Gabp NOUN NN Number=Sing _ _ _ _ 35 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 / / PUNCT , _ _ _ _ SpaceAfter=No 38 GABP GABP PROPN NNP Number=Sing _ _ _ _ 39 beta beta PROPN NNP Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 for for ADP IN _ _ _ _ _ 42 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 low low ADJ JJ Degree=Pos _ _ _ _ 44 level level NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 47 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 6176 # text = When all three sites were present, a second complex "a" was detected, which contains an unknown member of the Ets family. 1 When when ADV WRB PronType=Int _ _ _ _ 2 all all DET DT _ _ _ _ _ 3 three three NUM CD NumType=Card _ _ _ _ 4 sites site NOUN NNS Number=Plur _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 present present ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 10 complex complex NOUN NN Number=Sing _ _ _ _ 11 " " PUNCT `` _ _ _ _ SpaceAfter=No 12 a a NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 " " PUNCT '' _ _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 which which PRON WDT PronType=Int _ _ _ _ 18 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 unknown unknown ADJ JJ Degree=Pos _ _ _ _ 21 member member NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 Ets et PROPN NNPS Number=Plur _ _ _ _ 25 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 6177 # text = Formation of complex a was cell-type specific and correlated with a high level of transcription. 1 Formation Formation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 complex complex NOUN NN Number=Sing _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 type type NOUN NN Number=Sing _ _ _ _ 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 high high ADJ JJ Degree=Pos _ _ _ _ 15 level level NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 6178 # text = Deletion of the 5'-most Ets site had no effect on binding to GABP alpha/GABP beta, but it eliminated a. 1 Deletion Deletion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 ' ' NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 most most ADJ JJS Degree=Sup _ _ _ _ 8 Ets et NOUN NNS Number=Plur _ _ _ _ 9 site site NOUN NN Number=Sing _ _ _ _ 10 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 no no DET DT _ _ _ _ _ 12 effect effect NOUN NN Number=Sing _ _ _ _ 13 on on SCONJ IN _ _ _ _ _ 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 GABP GABP PROPN NNP Number=Sing _ _ _ _ 17 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 / / PUNCT , _ _ _ _ SpaceAfter=No 19 GABP GABP PROPN NNP Number=Sing _ _ _ _ 20 beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 24 eliminated eliminate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 6179 # text = Concomitant with this loss of a, a new Ets-1-containing complex "c" appeared. 1 Concomitant Concomitant ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 loss loss NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 new new ADJ JJ Degree=Pos _ _ _ _ 10 Ets Ets PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 containing contain VERB VBG VerbForm=Ger _ _ _ _ 15 complex complex NOUN NN Number=Sing _ _ _ _ 16 " " PUNCT `` _ _ _ _ SpaceAfter=No 17 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 " " PUNCT '' _ _ _ _ _ 19 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 6180 # text = Complex c substituted efficiently for complex a in transcriptional activation. 1 Complex complex NOUN NN Number=Sing _ _ _ _ 2 c care NOUN NN Number=Sing _ _ _ _ 3 substituted substitute VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 efficiently efficiently ADV RB _ _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 complex complex NUM CD NumType=Card _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 6181 # text = We conclude that although neither of the two 5'-most Ets sites alone binds nuclear protein, they appear to act as modulators which control the pattern of Ets proteins that bind the alpha 4 gene promoter. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 although although SCONJ IN _ _ _ _ _ 5 neither neither DET DT _ _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 two two NUM CD NumType=Card _ _ _ _ 9 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 most most ADJ JJS Degree=Sup _ _ _ _ 13 Ets et NOUN NNS Number=Plur _ _ _ _ 14 sites site NOUN NNS Number=Plur _ _ _ _ 15 alone alone ADV RB _ _ _ _ _ 16 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 21 appear appear VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 act act VERB VB VerbForm=Inf _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 modulators modulator NOUN NNS Number=Plur _ _ _ _ 26 which which PRON WDT PronType=Rel _ _ _ _ 27 control control VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 pattern pattern NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 Ets ets NOUN NNS Number=Plur _ _ _ _ 32 proteins protein NOUN NNS Number=Plur _ _ _ _ 33 that that PRON WDT PronType=Rel _ _ _ _ 34 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 alpha alpha NOUN NN Number=Sing _ _ _ _ 37 4 4 NUM CD NumType=Card _ _ _ _ 38 gene gene NOUN NN Number=Sing _ _ _ _ 39 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 6182 # text = This arrangement of Ets sites, coupled with the tissue- and developmental-specific expression of Ets members, likely play a key role in defining the pattern of alpha 4 integrin. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 arrangement arrangement NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Ets ets NOUN NNS Number=Plur _ _ _ _ 5 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 coupled couple VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 developmental developmental ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 specific specific ADJ JJ Degree=Pos _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 Ets ets NOUN NNS Number=Plur _ _ _ _ 19 members member NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 likely likely ADV RB _ _ _ _ _ 22 play play VERB VB VerbForm=Inf _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 key key ADJ JJ Degree=Pos _ _ _ _ 25 role role NOUN NN Number=Sing _ _ _ _ 26 in in SCONJ IN _ _ _ _ _ 27 defining define VERB VBG VerbForm=Ger _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 pattern pattern NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 alpha alpha ADV RB _ _ _ _ _ 32 4 4 NUM CD NumType=Card _ _ _ _ 33 integrin integrin NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6183 # text = Document 003001620 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001620 003001620 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6184 # text = Kappa B-specific DNA binding proteins are differentially inhibited by enhancer mutations and biological oxidation. 1 Kappa Kappa PROPN NNP Number=Sing _ _ _ _ 2 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 DNA dna NOUN NN Number=Sing _ _ _ _ 6 binding binding VERB VBG VerbForm=Ger _ _ _ _ 7 proteins protein NOUN NNS Number=Plur _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 differentially differentially ADV RB _ _ _ _ _ 10 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 13 mutations mutation NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 biological biological ADJ JJ Degree=Pos _ _ _ _ 16 oxidation oxidation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6185 # text = Kappa B 1 Kappa Kappa PROPN NNP Number=Sing _ _ _ _ 2 B B PROPN NNP Number=Sing _ _ _ _ # sent_id = 6186 # text = (kappa 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 6187 # text = B) enhancer binding proteins isolated from the nuclei of activated human T cells produce two distinct nucleoprotein complexes when incubated with the kappa B element from the interleukin-2 receptor-alpha (IL-2R alpha) gene. 1 B b X LS _ _ _ _ SpaceAfter=No 2 ) ) PUNCT -RRB- _ _ _ _ _ 3 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ _ 6 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 produce produce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 two two NUM CD NumType=Card _ _ _ _ 17 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 18 nucleoprotein nucleoprotein NOUN NN Number=Sing _ _ _ _ 19 complexes complex NOUN NNS Number=Plur _ _ _ _ 20 when when ADV WRB PronType=Int _ _ _ _ 21 incubated incubate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ _ 26 element element NOUN NN Number=Sing _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ _ 32 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 alpha alpha NOUN NN Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 2R 2r NOUN NN Number=Sing _ _ _ _ 39 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 6188 # text = These two DNA-protein complexes are composed of at least four host proteins (p50, p55, p75, p85), each of which shares structural similarity with the v-rel oncogene product. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 complexes complex NOUN NNS Number=Plur _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 at at ADV RB _ _ _ _ _ 11 least least ADV RBS Degree=Sup _ _ _ _ 12 four four NUM CD NumType=Card _ _ _ _ 13 host host NOUN NN Number=Sing _ _ _ _ 14 proteins protein NOUN NNS Number=Plur _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 p55 p55 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 p75 p75 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 p85 p85 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 each each DET DT _ _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 which which PRON WDT PronType=Int _ _ _ _ 28 shares share NOUN NNS Number=Plur _ _ _ _ 29 structural structural ADJ JJ Degree=Pos _ _ _ _ 30 similarity similarity NOUN NN Number=Sing _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 v- v- SYM NFP _ _ _ _ SpaceAfter=No 34 rel rel ADJ JJ Degree=Pos _ _ _ _ 35 oncogene oncogene ADJ JJ Degree=Pos _ _ _ _ 36 product product NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 6189 # text = Nuclear expression of these proteins is induced with distinctly biphasic kinetics following phorbol ester activation of T cells (p55/p75 early and p50/p85 late). 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 distinctly distinctly ADV RB _ _ _ _ _ 10 biphasic biphasic ADJ JJ Degree=Pos _ _ _ _ 11 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 12 following follow VERB VBG VerbForm=Ger _ _ _ _ 13 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 14 ester ester NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 p55 p55 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 p75 p75 NOUN NN Number=Sing _ _ _ _ 23 early early ADV RB Degree=Pos _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 p50/ p50/ SYM SYM _ _ _ _ SpaceAfter=No 26 p85 p85 NUM CD NumType=Card _ _ _ _ 27 late late ADV RB Degree=Pos _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 6190 # text = DNA-protein crosslinking studies have revealed that the more rapidly migrating B2 complex contains both p50 and p55 while the more slowly migrating B1 complex is composed of p50, p55, p75, and p85. 1 DNA- DNA- SYM NFP _ _ _ _ SpaceAfter=No 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 crosslinking crosslink NOUN NN Number=Sing _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ _ 5 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 more more ADV RBR _ _ _ _ _ 10 rapidly rapidly ADV RB _ _ _ _ _ 11 migrating migrating VERB VBG VerbForm=Ger _ _ _ _ 12 B2 b2 NUM CD NumType=Card _ _ _ _ 13 complex complex ADJ JJ Degree=Pos _ _ _ _ 14 contains contain NOUN NNS Number=Plur _ _ _ _ 15 both both CCONJ CC _ _ _ _ _ 16 p50 p50 NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 p55 p55 NOUN NN Number=Sing _ _ _ _ 19 while while SCONJ IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 more more ADV RBR _ _ _ _ _ 22 slowly slowly ADV RB _ _ _ _ _ 23 migrating migrating VERB VBG VerbForm=Ger _ _ _ _ 24 B1 b1 NUM CD NumType=Card _ _ _ _ 25 complex complex NOUN NN Number=Sing _ _ _ _ 26 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 p55 p55 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 p75 p75 NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 p85 p85 NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 6191 # text = Site-directed mutagenesis of the wild-type IL-2R alpha kappa B enhancer (GGGGAATCTCCC) has revealed that the binding of p50 and p55 (B2 complex) is particularly sensitive to alteration of the 5' triplet of deoxyguanosine residues. 1 Site site ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 type type NOUN NN Number=Sing _ _ _ _ 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2R 2r NOUN NN Number=Sing _ _ _ _ 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 GGGGAATCTCCC GGGGAATCTCCC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 that that SCONJ IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 binding binding NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 p50 p50 NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 p55 p55 NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 B2 b2 NUM CD NumType=Card _ _ _ _ 31 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 particularly particularly ADV RB _ _ _ _ _ 35 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 alteration alteration NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 ' ' PUNCT `` _ _ _ _ _ 42 triplet triplet NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 deoxyguanosine deoxyguanosine NOUN NN Number=Sing _ _ _ _ 45 residues residue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 6192 # text = In contrast, formation of the B1 complex, reflecting the binding of p75 and p85, critically depends upon the more 3' sequences of this enhancer element. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 formation formation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 B1 B1 PROPN NNP Number=Sing _ _ _ _ 8 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 reflecting reflecte VERB VBG VerbForm=Ger _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 binding binding NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 p75 p75 NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 p85 p85 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 critically critically ADV RB _ _ _ _ _ 19 depends depend VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 upon upon ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 more more ADJ JJR Degree=Cmp _ _ _ _ 23 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 ' ' PUNCT `` _ _ _ _ _ 25 sequences sequence NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 29 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 6193 # text = DNA binding by all four of these Rel-related factors is blocked by selective chemical modification of lysine and arginine residues, suggesting that both of these basic amino acids are required for binding to the kappa B element. 1 DNA dna NOUN NN Number=Sing _ _ _ _ 2 binding binding VERB VBG VerbForm=Ger _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 all all DET DT _ _ _ _ _ 5 four four NUM CD NumType=Card _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 Rel-related Rel-relate ADJ JJ Degree=Pos _ _ _ _ 9 factors factor NOUN NNS Number=Plur _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 selective selective ADJ JJ Degree=Pos _ _ _ _ 14 chemical chemical ADJ JJ Degree=Pos _ _ _ _ 15 modification modification NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 lysine lysine NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 arginine arginine NOUN NN Number=Sing _ _ _ _ 20 residues residue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 both both DET DT _ _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 27 basic basic ADJ JJ Degree=Pos _ _ _ _ 28 amino amino NOUN NN Number=Sing _ _ _ _ 29 acids acid NOUN NNS Number=Plur _ _ _ _ 30 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 for for SCONJ IN _ _ _ _ _ 33 binding bind VERB VBG VerbForm=Ger _ _ _ _ 34 to to ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 kappa kappa NOUN NN Number=Sing _ _ _ _ 37 B b NOUN NN Number=Sing _ _ _ _ 38 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 6194 # text = Similarly, covalent modification of free sulfhydryl groups with diamide (reversible) or N-ethylmaleimide (irreversible) results in a complete loss of DNA binding activity. 1 Similarly similarly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 covalent covalent ADJ JJ Degree=Pos _ _ _ _ 4 modification modification NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 free free ADJ JJ Degree=Pos _ _ _ _ 7 sulfhydryl sulfhydryl NOUN NN Number=Sing _ _ _ _ 8 groups group NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 diamide diamide NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 reversible reversible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 N not PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 ethylmaleimide ethylmaleimide NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 irreversible irreversible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 results result NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 complete complete ADJ JJ Degree=Pos _ _ _ _ 25 loss loss NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 DNA dna NOUN NN Number=Sing _ _ _ _ 28 binding binding VERB VBG VerbForm=Ger _ _ _ _ 29 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 6195 # text = In contrast, mild oxidation with glucose oxidase selectively inhibits p75 and p85 binding while not blocking p50 and p55 interactions. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 mild mild ADJ JJ Degree=Pos _ _ _ _ 5 oxidation oxidation NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 glucose glucose NOUN NN Number=Sing _ _ _ _ 8 oxidase oxidase NOUN NN Number=Sing _ _ _ _ 9 selectively selectively ADV RB _ _ _ _ _ 10 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 p75 p75 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 p85 p85 NUM CD NumType=Card _ _ _ _ 14 binding binding VERB VBG VerbForm=Ger _ _ _ _ 15 while while SCONJ IN _ _ _ _ _ 16 not not ADV RB _ _ _ _ _ 17 blocking blocke VERB VBG VerbForm=Ger _ _ _ _ 18 p50 p50 NUM CD NumType=Card _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 p55 p55 NUM CD NumType=Card _ _ _ _ 21 interactions interaction NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 6196 # text = These findings suggest that reduced cysteine thiols play an important role in the DNA binding activity of this family of Rel-related transcription factors. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 7 thiols thiol NOUN NNS Number=Plur _ _ _ _ 8 play play VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 important important ADJ JJ Degree=Pos _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 DNA dna NOUN NN Number=Sing _ _ _ _ 15 binding bind VERB VBG VerbForm=Ger _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 19 family family NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 Rel- Rel- X GW _ _ _ _ SpaceAfter=No 22 related related ADJ JJ Degree=Pos _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6197 # text = Document 003001626 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001626 003001626 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6198 # text = Involvement of tyrosine phosphorylation in endothelial adhesion molecule induction. 1 Involvement involvement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 4 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 7 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 8 molecule molecule NOUN NN Number=Sing _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6199 # text = Induction of endothelial adhesion molecules by the cytokine tumor necrosis factor-alpha (TNF) can occur independently of protein kinase C and activation of a protein tyrosine kinase (PTK) has recently been implicated in the upregulation of vascular cell adhesion molecule 1 (VCAM-1) by interleukin-4 (IL-4) on endothelial cells. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 4 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 5 molecules molecule NOUN NNS Number=Plur _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 9 tumor tumor NOUN NN Number=Sing _ _ _ _ 10 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 can can AUX MD VerbForm=Fin _ _ _ _ 18 occur occur VERB VB VerbForm=Inf _ _ _ _ 19 independently independently ADV RB _ _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ _ 22 kinase kinase NOUN NN Number=Sing _ _ _ _ 23 C c NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 protein protein NOUN NN Number=Sing _ _ _ _ 29 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 30 kinase kinase NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 PTK PTK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 recently recently ADV RB _ _ _ _ _ 36 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 37 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 43 cell cell NOUN NN Number=Sing _ _ _ _ 44 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 45 molecule molecule NOUN NN Number=Sing _ _ _ _ 46 1 1 NUM CD NumType=Card _ _ _ _ 47 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 48 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 1 1 X LS _ _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ _ 52 by by ADP IN _ _ _ _ _ 53 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT , _ _ _ _ SpaceAfter=No 55 4 4 NUM CD NumType=Card _ _ _ _ 56 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 57 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 59 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 60 ) ) PUNCT -RRB- _ _ _ _ _ 61 on on ADP IN _ _ _ _ _ 62 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 63 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 64 . . PUNCT . _ _ _ _ _ # sent_id = 6200 # text = We demonstrate that the PTK inhibitors herbimycin A or genistein suppress induction of endothelial VCAM-1 and E-selectin, as well as subsequent monocytic cell adhesion to endothelial cells stimulated by TNF. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 PTK Ptk NOUN NN Number=Sing _ _ _ _ 6 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 7 herbimycin herbimycin ADP IN _ _ _ _ _ 8 A a NOUN NN Number=Sing _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 genistein genistein NOUN NN Number=Sing _ _ _ _ 11 suppress suppress NOUN NN Number=Sing _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 15 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 selectin selectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 as as ADV RB _ _ _ _ _ 23 well well ADV RB Degree=Pos _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 26 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 6201 # text = Inhibition studies indicate that specific tyrosine phosphorylation following PTK activation is involved in the mobilization of the transcription factor, nuclear factor kappa B, and VCAM-1 mRNA expression. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 7 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 8 following follow VERB VBG VerbForm=Ger _ _ _ _ 9 PTK PTK NUM CD NumType=Card _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 involved involved ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 mobilization mobilization NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 kappa kappa NOUN NN Number=Sing _ _ _ _ 24 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 31 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 6202 # text = This may have implications for pathophysiological conditions that involve the upregulation of these molecules (e.g. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 may may AUX MD VerbForm=Fin _ _ _ _ 3 have have VERB VB VerbForm=Inf _ _ _ _ 4 implications implication NOUN NNS Number=Plur _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 pathophysiological pathophysiological ADJ JJ Degree=Pos _ _ _ _ 7 conditions condition NOUN NNS Number=Plur _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 involve involve VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 14 molecules molecule NOUN NNS Number=Plur _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 e.g. e.g. X FW _ _ _ _ _ # sent_id = 6203 # text = inflammation and atherosclerosis). 1 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 atherosclerosis atherosclerosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 5 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6204 # text = Document 003001627 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001627 003001627 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6205 # text = Nonpituitary human prolactin gene transcription is independent of Pit-1 and differentially controlled in lymphocytes and in endometrial stroma. 1 Nonpituitary Nonpituitary ADJ JJ Degree=Pos _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 prolactin prolactin NOUN NN Number=Sing _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 independent independent ADJ JJ Degree=Pos _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 Pit pit PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 differentially differentially ADV RB _ _ _ _ _ 14 controlled control VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 endometrial endometrial ADJ JJ Degree=Pos _ _ _ _ 20 stroma stroma NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6206 # text = Expression of the human PRL (hPRL) gene in extrapituitary sites such as the uterus (decidualized endometrial stroma and myometrium) and cells of the hematopoietic lineage is directed by an alternative promoter which is located approximately 6 kilobases (kb) upstream of the pituitary-specific start site. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 PRL PRL NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 hPRL hPRL NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 extrapituitary extrapituitary ADJ JJ Degree=Pos _ _ _ _ 12 sites site NOUN NNS Number=Plur _ _ _ _ 13 such such ADJ JJ Degree=Pos _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 uterus uterus NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 decidualized decidualize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 endometrial endometrial ADJ JJ Degree=Pos _ _ _ _ 20 stroma stroma NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 myometrium myometrium NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 29 lineage lineage NOUN NN Number=Sing _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 directed direct VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 35 promoter promoter NOUN NN Number=Sing _ _ _ _ 36 which which PRON WDT PronType=Rel _ _ _ _ 37 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 approximately approximately ADV RB _ _ _ _ _ 40 6 6 NUM CD NumType=Card _ _ _ _ 41 kilobases kilobase NOUN NNS Number=Plur _ _ _ _ 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 kb kb NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ _ 45 upstream upstream NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 pituitary pituitary NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 specific specific ADJ JJ Degree=Pos _ _ _ _ 51 start start NOUN NN Number=Sing _ _ _ _ 52 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 6207 # text = In order to delineate the tissue-specific mechanisms governing the control of nonpituitary PRL gene expression, we have cloned and sequenced 3 kb 1 In in ADP IN _ _ _ _ _ 2 order order NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 delineate delineate VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 10 governing govern VERB VBG VerbForm=Ger _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 control control NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 nonpituitary nonpituitary ADJ JJ Degree=Pos _ _ _ _ 15 PRL PRL NOUN NN Number=Sing _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 20 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 sequenced sequence VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 3 3 NUM CD NumType=Card _ _ _ _ 25 kb kb NOUN NN Number=Sing _ _ _ _ # sent_id = 6208 # text = 5'-flanking DNA of the upstream decidual/lymphoid (dPRL) promoter. 1 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 ' ' NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 5 DNA dna NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 9 decidual decidual NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 lymphoid lymphoid NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 dPRL dPRL NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 6209 # text = Based on sequence homology we identified two binding motifs for Pit-1 and seven half-sites for glucocorticoid receptor/progesterone receptor (PR) binding. 1 Based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 on on ADP IN _ _ _ _ _ 3 sequence sequence NOUN NN Number=Sing _ _ _ _ 4 homology homology NOUN NN Number=Sing _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 motifs motif NOUN NNS Number=Plur _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 Pit pit PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 seven seven NUM CD NumType=Card _ _ _ _ 16 half half NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 sites site NOUN NNS Number=Plur _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 / / PUNCT , _ _ _ _ SpaceAfter=No 23 progesterone progesterone NOUN NN Number=Sing _ _ _ _ 24 receptor receptor NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 PR pr NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 6210 # text = We focused our studies on the role of Pit-1 and of PR as potential transcriptional regulators, since the POU domain protein Pit-1 is essential in the control of pituitary PRL expression, and progesterone induces decidual transformation of the endometrial stroma, a differentiation process during which the decidual PRL gene is activated. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 focused focus VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 Pit pit NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 PR pr NOUN NN Number=Sing _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 potential potential ADJ JJ Degree=Pos _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 regulators regulator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 since since SCONJ IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 POU POU NOUN NN Number=Sing _ _ _ _ 23 domain domain NOUN NN Number=Sing _ _ _ _ 24 protein protein NOUN NN Number=Sing _ _ _ _ 25 Pit pit NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 essential essential ADJ JJ Degree=Pos _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 control control NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 pituitary pituitary NOUN NN Number=Sing _ _ _ _ 35 PRL pRl NOUN NN Number=Sing _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 progesterone progesterone VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 induces induces NOUN NNS Number=Plur _ _ _ _ 41 decidual decidual ADJ JJ Degree=Pos _ _ _ _ 42 transformation transformation NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 endometrial endometrial ADJ JJ Degree=Pos _ _ _ _ 46 stroma stroma NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 49 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 50 process process NOUN NN Number=Sing _ _ _ _ 51 during during ADP IN _ _ _ _ _ 52 which which PRON WDT PronType=Rel _ _ _ _ 53 the the DET DT Definite=Def|PronType=Art _ _ _ _ 54 decidual decidual ADJ JJ Degree=Pos _ _ _ _ 55 PRL pRl NOUN NN Number=Sing _ _ _ _ 56 gene gene NOUN NN Number=Sing _ _ _ _ 57 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 58 activated activated VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 6211 # text = We demonstrate in a variety of cell types, including lymphocytes and endometrial stroma, that Pit-1 is not involved in the regulation of dPRL promoter/reporter gene constructs carrying 3 kb 5'-flanking DNA. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 variety variety NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 including include VERB VBG VerbForm=Ger _ _ _ _ 11 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 endometrial endometrial ADJ JJ Degree=Pos _ _ _ _ 14 stroma stroma NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 Pit pit PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - SYM SYM _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 involved involved ADJ JJ Degree=Pos _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 regulation regulation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 dPRL dprl NOUN NN Number=Sing _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 / / PUNCT , _ _ _ _ SpaceAfter=No 30 reporter reporter NOUN NN Number=Sing _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ _ 32 constructs construct NOUN NNS Number=Plur _ _ _ _ 33 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 34 3 3 NUM CD NumType=Card _ _ _ _ 35 kb kb NOUN NN Number=Sing _ _ _ _ 36 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 38 - - PUNCT , _ _ _ _ SpaceAfter=No 39 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 40 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 6212 # text = Our experiments also show that activated PR does not confer direct transcriptional control on the dPRL promoter. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 experiments experiment NOUN NNS Number=Plur _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 show show VERB VB VerbForm=Inf _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 PR pr NOUN NN Number=Sing _ _ _ _ 8 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 confer confer VERB VB VerbForm=Inf _ _ _ _ 11 direct direct ADJ JJ Degree=Pos _ _ _ _ 12 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 13 control control NOUN NN Number=Sing _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 dPRL dprl ADJ JJ Degree=Pos _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 6213 # text = When we compared the activity of the transfected dPRL promoter in PRL-secreting and nonsecreting lymphoid cells, we found that the 3 kb 5'-flanking region of the dPRL promoter did not contain elements restricting expression to only those lymphocytes that produce PRL but allowed expression of fusion reporter genes irrespective of the status of the endogenous PRL gene. 1 When when ADV WRB PronType=Int _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 compared compare VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 dPRL dprl NOUN NN Number=Sing _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 PRL PRL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 secreting secret ADJ JJ Degree=Pos _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 nonsecreting nonsecret ADJ JJ Degree=Pos _ _ _ _ 17 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 21 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 that that SCONJ IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 3 3 NUM CD NumType=Card _ _ _ _ 25 kb kb NOUN NN Number=Sing _ _ _ _ 26 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 30 region region NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 dPRL dPRL PROPN NNP Number=Sing _ _ _ _ 34 promoter promoter NOUN NN Number=Sing _ _ _ _ 35 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 not not PART RB _ _ _ _ _ 37 contain contain VERB VB VerbForm=Inf _ _ _ _ 38 elements element NOUN NNS Number=Plur _ _ _ _ 39 restricting restrict VERB VBG VerbForm=Ger _ _ _ _ 40 expression expression NOUN NN Number=Sing _ _ _ _ 41 to to ADP IN _ _ _ _ _ 42 only only ADV RB _ _ _ _ _ 43 those those DET DT Number=Plur|PronType=Dem _ _ _ _ 44 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 45 that that PRON WDT PronType=Rel _ _ _ _ 46 produce produce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 47 PRL Prl NOUN NN Number=Sing _ _ _ _ 48 but but CCONJ CC _ _ _ _ _ 49 allowed allowed VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 expression expression NOUN NN Number=Sing _ _ _ _ 51 of of ADP IN _ _ _ _ _ 52 fusion fusion NOUN NN Number=Sing _ _ _ _ 53 reporter reporter NOUN NN Number=Sing _ _ _ _ 54 genes gene NOUN NNS Number=Plur _ _ _ _ 55 irrespective irrespective ADV RB _ _ _ _ _ 56 of of ADP IN _ _ _ _ _ 57 the the DET DT Definite=Def|PronType=Art _ _ _ _ 58 status status NOUN NN Number=Sing _ _ _ _ 59 of of ADP IN _ _ _ _ _ 60 the the DET DT Definite=Def|PronType=Art _ _ _ _ 61 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 62 PRL pRl NOUN NN Number=Sing _ _ _ _ 63 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 64 . . PUNCT . _ _ _ _ _ # sent_id = 6214 # text = This was in sharp contrast to endometrial cells where 3 kb 5'-flanking DNA conferred strong transcriptional activation on the dPRL promoter in decidualized endometrial stromal cells actively secreting PRL, but did not allow transcription in undifferentiated non-PRL-secreting endometrial stromal cells. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 sharp sharp ADJ JJ Degree=Pos _ _ _ _ 5 contrast contrast NOUN NN Number=Sing _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 endometrial endometrial ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 where where ADV WRB PronType=Rel _ _ _ _ 10 3 3 NUM CD NumType=Card _ _ _ _ 11 kb kb NOUN NN Number=Sing _ _ _ _ 12 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 flanking flanking VERB VBG VerbForm=Ger _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ _ 17 conferred confer VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 strong strong ADJ JJ Degree=Pos _ _ _ _ 19 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 on on ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 dPRL dprl ADJ JJ Degree=Pos _ _ _ _ 24 promoter promoter NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 decidualized decidualized VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 endometrial endometrial ADJ JJ Degree=Pos _ _ _ _ 28 stromal stromal ADJ JJ Degree=Pos _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 actively actively ADV RB _ _ _ _ _ 31 secreting secrete VERB VBG VerbForm=Ger _ _ _ _ 32 PRL PRL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 but but CCONJ CC _ _ _ _ _ 35 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 not not PART RB _ _ _ _ _ 37 allow allow VERB VB VerbForm=Inf _ _ _ _ 38 transcription transcription NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 undifferentiated undifferentiated ADJ JJ Degree=Pos _ _ _ _ 41 non-PRL non-prl NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT , _ _ _ _ SpaceAfter=No 43 secreting secret VERB VBG VerbForm=Ger _ _ _ _ 44 endometrial endometrial ADJ JJ Degree=Pos _ _ _ _ 45 stromal stromal ADJ JJ Degree=Pos _ _ _ _ 46 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 6215 # text = Activation of the dPRL promoter construct in these undifferentiated cells could however be induced by the addition of cAMP, in the absence of progesterone, suggesting that a signal transduced through the cAMP signaling pathway is a primary inducer of decidual PRL gene expression. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 dPRL dPRL PROPN NNP Number=Sing _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ _ 6 construct construct NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 9 undifferentiated undifferentiated ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 could could AUX MD VerbForm=Fin _ _ _ _ 12 however however ADV RB _ _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 addition addition NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 cAMP camp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 absence absence NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 progesterone progesterone NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 28 that that SCONJ IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 signal signal NOUN NN Number=Sing _ _ _ _ 31 transduced transduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 through through ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 cAMP camp NOUN NN Number=Sing _ _ _ _ 35 signaling signaling NOUN NN Number=Sing _ _ _ _ 36 pathway pathway NOUN NN Number=Sing _ _ _ _ 37 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 primary primary ADJ JJ Degree=Pos _ _ _ _ 40 inducer inducer NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 decidual decidual ADJ JJ Degree=Pos _ _ _ _ 43 PRL PRL NOUN NN Number=Sing _ _ _ _ 44 gene gene NOUN NN Number=Sing _ _ _ _ 45 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6216 # text = Document 003001631 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001631 003001631 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6217 # text = HIV-1 reactivation in resting peripheral blood mononuclear cells of infected adults upon in vitro CD4 cross-linking by ligands of the CDR2-loop in extracellular domain 1. 1 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 reactivation reactivation NOUN NN Number=Sing _ _ _ _ 5 in in SCONJ IN _ _ _ _ _ 6 resting rest VERB VBG VerbForm=Ger _ _ _ _ 7 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 8 blood blood NOUN NN Number=Sing _ _ _ _ 9 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 adults adult NOUN NNS Number=Plur _ _ _ _ 14 upon upon ADP IN _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 vitro vitro PROPN NNP Number=Sing _ _ _ _ 17 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 18 cross cross PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 ligands ligand NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 CDR2 Cdr2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 loop loop NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 29 domain domain NOUN NN Number=Sing _ _ _ _ 30 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6218 # text = HIV-1 infects resting peripheral blood mononuclear cells (PBMCs) but remains inactive state until subsequent cell activation. 1 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 infects infects NOUN NNS Number=Plur _ _ _ _ 5 resting reste VERB VBG VerbForm=Ger _ _ _ _ 6 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 7 blood blood NOUN NN Number=Sing _ _ _ _ 8 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 PBMCs PBMC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 16 state state NOUN NN Number=Sing _ _ _ _ 17 until until ADP IN _ _ _ _ _ 18 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 6219 # text = We have demonstrated that the cross-linking of cell surface CD4 by gp120-anti-gp120 immune complexes or heat-inactivated HIV-1 (iHIV-1) is sufficient to trigger activation signals leading to virus reactivation (9). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 -linking -linking NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 surface surface NOUN NN Number=Sing _ _ _ _ 11 CD4 CD4 NUM CD NumType=Card _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 gp120-anti-gp120 gp120-anti-gp120 NUM CD NumType=Card _ _ _ _ 14 immune immune ADJ JJ Degree=Pos _ _ _ _ 15 complexes complex NOUN NNS Number=Plur _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 heat heat NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 inactivated inactivate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 iHIV ihiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 1 1 X LS _ _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 30 to to PART TO _ _ _ _ _ 31 trigger trigger VERB VB VerbForm=Inf _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ _ 33 signals signal NOUN NNS Number=Plur _ _ _ _ 34 leading lead VERB VBG VerbForm=Ger _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 virus virus NOUN NN Number=Sing _ _ _ _ 37 reactivation reactivation NOUN NN Number=Sing _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 6220 # text = In this study, we demonstrate that NF-kappaB nuclear translocation and stimulation of virus production by iHIV-1 were strictly linked to the concentrations of viral proteins used as exogenous stimuli. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 translocation translocation NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ _ 17 production production NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 iHIV iHIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 strictly strictly ADV RB _ _ _ _ _ 24 linked link VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 viral viral ADJ JJ Degree=Pos _ _ _ _ 30 proteins protein NOUN NNS Number=Plur _ _ _ _ 31 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 as as ADP IN _ _ _ _ _ 33 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 34 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 6221 # text = Moreover, we further investigated the physiologic relevance of these observations. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 further further ADV RB _ _ _ _ _ 5 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 physiologic physiologic NOUN NN Number=Sing _ _ _ _ 8 relevance relevance NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 observations observation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 6222 # text = When submitted to an in vitro CD4 cross-linking by iHIV-1, PBMCs from HIV-1-infected patients were found to produce virus. 1 When when ADV WRB PronType=Int _ _ _ _ 2 submitted submit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 vitro vitro PROPN NNP Number=Sing _ _ _ _ 7 CD4 Cd4 PROPN NNP Number=Sing _ _ _ _ 8 cross cross PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 iHIV iHIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 PBMCs Pbmcs NOUN NNS Number=Plur _ _ _ _ 16 from from ADP IN _ _ _ _ _ 17 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 patients patient NOUN NNS Number=Plur _ _ _ _ 23 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 produce produce VERB VB VerbForm=Inf _ _ _ _ 27 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 6223 # text = This viral reactivation was associated with increased NF-kappaB nuclear translocation in patients' PBMCs. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 viral viral ADJ JJ Degree=Pos _ _ _ _ 3 reactivation reactivation NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 translocation translocation NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 ' 's PART POS _ _ _ _ _ 16 PBMCs PBMC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 6224 # text = Additionally, virus reactivation in resting PBMCs infected in vitro with HIV-1 was found to be specifically induced by ligands of the CDR2-loop in domain 1 (D1) of CD4 (virus envelope and anti-CD4 monoclonal antibodies). 1 Additionally additionally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 virus virus NOUN NN Number=Sing _ _ _ _ 4 reactivation reactivation NOUN NN Number=Sing _ _ _ _ 5 in in SCONJ IN _ _ _ _ _ 6 resting rest VERB VBG VerbForm=Ger _ _ _ _ 7 PBMCs Pbmcs NOUN NNS Number=Plur _ _ _ _ 8 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 vitro vitro NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 specifically specifically ADV RB _ _ _ _ _ 20 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 ligands ligand NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 CDR2 Cdr2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 loop loop NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 domain domain NOUN NN Number=Sing _ _ _ _ 30 1 1 NUM CD NumType=Card _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 D1 d1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 virus virus NOUN NN Number=Sing _ _ _ _ 38 envelope envelope NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 anti-CD4 anti-CD4 NUM CD NumType=Card _ _ _ _ 41 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 42 antibodies antibody NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 6225 # text = In contrast, virus reactivation was not observed following CD4 oligomerization by antibodies that bind other epitopes in D1, including the D1/CDR3-loop. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 virus virus NOUN NN Number=Sing _ _ _ _ 5 reactivation reactivation NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 following follow VERB VBG VerbForm=Ger _ _ _ _ 10 CD4 CD4 NUM CD NumType=Card _ _ _ _ 11 oligomerization oligomerization NOUN NN Number=Sing _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 other other ADJ JJ Degree=Pos _ _ _ _ 17 epitopes epitope NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 D1 d1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 including include VERB VBG VerbForm=Ger _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 D1/CDR3 D1/CDR3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 loop loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 6226 # text = Finally, soluble CD4 (sCD4) prevented virus reactivation by D1/CDR2-loop ligands. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 4 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 sCD4 sCD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 virus virus NOUN NN Number=Sing _ _ _ _ 10 reactivation reactivation NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 D1/CDR2 D1/CDR2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 loop loop NOUN NN Number=Sing _ _ _ _ 15 ligands ligand NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 6227 # text = Our results indicate that the signaling events initiated in PBMCs by oligomerization of CD4 at the D1/CDR2-loop can trigger HIV-1 upregulation in infected individuals. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 signaling signaling NOUN NN Number=Sing _ _ _ _ 7 events event NOUN NNS Number=Plur _ _ _ _ 8 initiated initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 PBMCs PBMC NOUN NNS Number=Plur _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 oligomerization oligomerization NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 15 at at ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 D1/CDR2 D1/cdr2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 loop loop NOUN NN Number=Sing _ _ _ _ 20 can can AUX MD VerbForm=Fin _ _ _ _ 21 trigger trigger VERB VB VerbForm=Inf _ _ _ _ 22 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 infected infect ADJ JJ Degree=Pos _ _ _ _ 28 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6228 # text = Document 003001633 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001633 003001633 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6229 # text = Glycation-dependent, reactive oxygen species-mediated suppression of the insulin gene promoter activity in HIT cells. 1 Glycation Glycation NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 6 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 7 species species NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 suppression suppression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 insulin insulin ADJ JJ Degree=Pos _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 HIT Hit ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6230 # text = Prolonged poor glycemic control in non-insulin-dependent diabetes mellitus patients often leads to a decline in insulin secretion from pancreatic beta cells, accompanied by a decrease in the insulin content of the cells. 1 Prolonged Prolong VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 poor poor ADJ JJ Degree=Pos _ _ _ _ 3 glycemic glycemic ADJ JJ Degree=Pos _ _ _ _ 4 control control NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 non-insulin non-insulin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 9 diabetes diabete NOUN NNS Number=Plur _ _ _ _ 10 mellitus mellitus CCONJ CC _ _ _ _ _ 11 patients patient NOUN NNS Number=Plur _ _ _ _ 12 often often ADV RB _ _ _ _ _ 13 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 decline decline NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 insulin insulin ADJ JJ Degree=Pos _ _ _ _ 19 secretion secretion NOUN NN Number=Sing _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 pancreatic pancreatic ADJ JJ Degree=Pos _ _ _ _ 22 beta beta NOUN NN Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 accompanied accompany VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 decrease decrease NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 insulin insulin ADJ JJ Degree=Pos _ _ _ _ 32 content content NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 6231 # text = As a step toward elucidating the pathophysiological background of the so-called glucose toxicity to pancreatic beta cells, we induced glycation in HIT-T15 cells using a sugar with strong deoxidizing activity, D-ribose, and examined the effects on insulin gene transcription. 1 As as ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 step step NOUN NN Number=Sing _ _ _ _ 4 toward toward SCONJ IN _ _ _ _ _ 5 elucidating elucidat VERB VBG VerbForm=Ger _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 pathophysiological pathophysiological ADJ JJ Degree=Pos _ _ _ _ 8 background background NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 so so ADV RB _ _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 glucose glucose DET DT Number=Plur|PronType=Dem _ _ _ _ 15 toxicity toxicity NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 pancreatic pancreatic ADJ JJ Degree=Pos _ _ _ _ 18 beta beta NOUN NN Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 22 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 glycation glycation NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 HIT Hit PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 T T PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 15 15 NUM CD NumType=Card _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 using use VERB VBG VerbForm=Ger _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 sugar sugar NOUN NN Number=Sing _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 strong strong ADJ JJ Degree=Pos _ _ _ _ 35 deoxidizing deoxidizing NOUN NN Number=Sing _ _ _ _ 36 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 D- d- NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 ribose ribose NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 effects effect NOUN NNS Number=Plur _ _ _ _ 45 on on ADP IN _ _ _ _ _ 46 insulin insulin ADJ JJ Degree=Pos _ _ _ _ 47 gene gene NOUN NN Number=Sing _ _ _ _ 48 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 6232 # text = The results of reporter gene analyses revealed that the insulin gene promoter is more sensitive to glycation than the control beta-actin gene promoter; approximately 50 and 80% of the insulin gene promoter activity was lost when the cells were kept for 3 d in the presence of 40 and 60 mM 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 reporter reporter NOUN NN Number=Sing _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 analyses analysis NOUN NNS Number=Plur _ _ _ _ 7 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 insulin insulin ADJ JJ Degree=Pos _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 more more ADV RBR _ _ _ _ _ 15 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 glycation glycation NOUN NN Number=Sing _ _ _ _ 18 than than ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 control control NOUN NN Number=Sing _ _ _ _ 21 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 actin actin NOUN NN Number=Sing _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ; ; PUNCT , _ _ _ _ _ 27 approximately approximately ADV RB _ _ _ _ _ 28 50 50 NUM CD NumType=Card _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 80 80 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 % % SYM NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 insulin insulin ADJ JJ Degree=Pos _ _ _ _ 35 gene gene NOUN NN Number=Sing _ _ _ _ 36 promoter promoter NOUN NN Number=Sing _ _ _ _ 37 activity activity NOUN NN Number=Sing _ _ _ _ 38 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 39 lost lose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 40 when when ADV WRB PronType=Int _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 cells cell NOUN NNS Number=Plur _ _ _ _ 43 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 44 kept keep VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 45 for for ADP IN _ _ _ _ _ 46 3 3 NUM CD NumType=Card _ _ _ _ 47 d would PROPN NNP Number=Sing _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 presence presence NOUN NN Number=Sing _ _ _ _ 51 of of ADP IN _ _ _ _ _ 52 40 40 NUM CD NumType=Card _ _ _ _ 53 and and CCONJ CC _ _ _ _ _ 54 60 60 NUM CD NumType=Card _ _ _ _ 55 mM mm NOUN NN Number=Sing _ _ _ _ # sent_id = 6233 # text = D-ribose, respectively. 1 D- D- SYM NFP _ _ _ _ SpaceAfter=No 2 ribose ribose PRON DT Number=Plur|PronType=Dem _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 5 . . PUNCT . _ _ _ _ _ # sent_id = 6234 # text = In agreement with this, decrease in the insulin mRNA and insulin content was observed in the glycation-induced cells. 1 In in ADP IN _ _ _ _ _ 2 agreement agreement NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 this this PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 decrease decrease NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 insulin insulin ADJ JJ Degree=Pos _ _ _ _ 10 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 insulin insulin ADJ JJ Degree=Pos _ _ _ _ 13 content content NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 glycation glycation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 6235 # text = Also, gel mobility shift analyses using specific antiserum revealed decrease in the DNA-binding activity of an insulin gene transcription factor, PDX-1/IPF1/STF-1. 1 Also also ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 gel gel VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 mobility mobility NOUN NN Number=Sing _ _ _ _ 5 shift shift NOUN NN Number=Sing _ _ _ _ 6 analyses analysis NOUN NNS Number=Plur _ _ _ _ 7 using use VERB VBG VerbForm=Ger _ _ _ _ 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 antiserum antiserum NOUN NN Number=Sing _ _ _ _ 10 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 decrease decrease NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 insulin insulin ADJ JJ Degree=Pos _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 PDX PDX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 -1/IPF1/STF -1/IPF1/STF NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 6236 # text = These effects of D-ribose seemed almost irreversible but could be prevented by addition of 1 mM aminoguanidine or 10 mM N-acetylcysteine, thus suggesting that glycation and reactive oxygen species, generated through the glycation reaction, serve as mediators of the phenomena. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 D- d- NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ribose ribose PRON DT Number=Plur|PronType=Dem _ _ _ _ 6 seemed seem VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 almost almost ADV RB _ _ _ _ _ 8 irreversible irreversible ADJ JJ Degree=Pos _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 could could AUX MD VerbForm=Fin _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 prevented prevent VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 addition addition NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 1 1 NUM CD NumType=Card _ _ _ _ 17 mM mm NOUN NN Number=Sing _ _ _ _ 18 aminoguanidine aminoguanidine NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 10 10 NUM CD NumType=Card _ _ _ _ 21 mM mm NOUN NN Number=Sing _ _ _ _ 22 N- N- SYM SYM _ _ _ _ SpaceAfter=No 23 acetylcysteine acetylcysteine NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 thus thus ADV RB _ _ _ _ _ 26 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 27 that that SCONJ IN _ _ _ _ _ 28 glycation glycation NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 31 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 32 species species NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 through through ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 glycation glycation NOUN NN Number=Sing _ _ _ _ 38 reaction reaction NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 serve serve VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 41 as as SCONJ IN _ _ _ _ _ 42 mediators mediator NOUN NNS Number=Plur _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 phenomena phenomena NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 6237 # text = These observations suggest that protein glycation in pancreatic beta cells, which occurs in vivo under chronic hyperglycemia, suppresses insulin gene transcription and thus can explain part of the beta cell glucose toxicity. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 glycation glycation NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 pancreatic pancreatic ADJ JJ Degree=Pos _ _ _ _ 9 beta beta NOUN NN Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which DET WDT PronType=Int _ _ _ _ 13 occurs occurs NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 vivo vivo NOUN NN Number=Sing _ _ _ _ 16 under under ADP IN _ _ _ _ _ 17 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 18 hyperglycemia hyperglycemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 suppresses suppress NOUN NNS Number=Plur _ _ _ _ 21 insulin insulin ADP IN _ _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 thus thus ADV RB _ _ _ _ _ 26 can can AUX MD VerbForm=Fin _ _ _ _ 27 explain explain VERB VB VerbForm=Inf _ _ _ _ 28 part part NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 beta beta NOUN NN Number=Sing _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 glucose glucose NOUN NN Number=Sing _ _ _ _ 34 toxicity toxicity NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6238 # text = Document 003001634 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001634 003001634 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6239 # text = Lactobacilli and vaginal host defense: activation of the human immunodeficiency virus type 1 long terminal repeat, cytokine production, and NF-kappaB. 1 Lactobacilli Lactobacilli PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 vaginal vaginal ADJ JJ Degree=Pos _ _ _ _ 4 host host NOUN NN Number=Sing _ _ _ _ 5 defense defense NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 : : PUNCT : _ _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 12 virus virus NOUN NN Number=Sing _ _ _ _ 13 type type NOUN NN Number=Sing _ _ _ _ 14 1 1 NUM CD NumType=Card _ _ _ _ 15 long long ADJ JJ Degree=Pos _ _ _ _ 16 terminal terminal NOUN NN Number=Sing _ _ _ _ 17 repeat repeat NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 20 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6240 # text = Lactobacilli, a component of the normal vaginal flora, can activate the human immunodeficiency virus (HIV)-1 long terminal repeat (LTR) in the Jurkat T lymphocyte and THP-1 macrophage cell lines. 1 Lactobacilli Lactobacilli PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 component component NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 normal normal ADJ JJ Degree=Pos _ _ _ _ 8 vaginal vaginal ADJ JJ Degree=Pos _ _ _ _ 9 flora flora NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 can can AUX MD VerbForm=Fin _ _ _ _ 12 activate activate VERB VB VerbForm=Inf _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 - - SYM SYM _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 long long ADJ JJ Degree=Pos _ _ _ _ 23 terminal terminal NOUN NN Number=Sing _ _ _ _ 24 repeat repeat NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 31 T T PROPN NNP Number=Sing _ _ _ _ 32 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ _ 37 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 6241 # text = Activation of the LTR in Jurkat cells was strongly enhanced by vanadate and inhibited by catalase, implicating H2O2. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 LTR LTR PROPN NNP Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 strongly strongly ADV RB _ _ _ _ _ 10 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 vanadate vanadate NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 catalase catalase NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 implicating implicate VERB VBG VerbForm=Ger _ _ _ _ 19 H2 H2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 O2 O2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 6242 # text = In contrast, activation in THP-1 cells occurred in the absence of vanadate and was unaffected by catalase. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 THP THP NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 absence absence NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 vanadate vanadate NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 unaffected unaffected ADJ JJ Degree=Pos _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 catalase catalase NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 6243 # text = The active material partitioned into the phenol layer on hot aqueous phenol extraction. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 active active ADJ JJ Degree=Pos _ _ _ _ 3 material material NOUN NN Number=Sing _ _ _ _ 4 partitioned partition VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 into into ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 phenol phenol NOUN NN Number=Sing _ _ _ _ 8 layer layer NOUN NN Number=Sing _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 hot hot ADJ JJ Degree=Pos _ _ _ _ 11 aqueous aqueous ADJ JJ Degree=Pos _ _ _ _ 12 phenol phenol NOUN NN Number=Sing _ _ _ _ 13 extraction extraction NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 6244 # text = Lactobacilli also increased tumor necrosis factor-alphaand interleukin-1betaproduction and activated NF-kappaB in THP-1 cells and increased tumor necrosis factor-alphaproduction by human monocytes. 1 Lactobacilli Lactobacilli PROPN NNP Number=Sing _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 tumor tumor NOUN NN Number=Sing _ _ _ _ 5 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 alphaand alphaand NOUN NN Number=Sing _ _ _ _ 9 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 betaproduction betaproduction NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 THP THP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 tumor tumor NOUN NN Number=Sing _ _ _ _ 25 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 -alphaproduction -alphaproduction NOUN NN Number=Sing _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 6245 # text = Human vaginal fluid specimens had comparable properties, which correlated with their bacterial content. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 vaginal vaginal ADJ JJ Degree=Pos _ _ _ _ 3 fluid fluid NOUN NN Number=Sing _ _ _ _ 4 specimens specimen NOUN NNS Number=Plur _ _ _ _ 5 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 comparable comparable ADJ JJ Degree=Pos _ _ _ _ 7 properties property NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 which which PRON WDT PronType=Rel _ _ _ _ 10 correlated correlate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 14 content content NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 6246 # text = These findings suggest the presence in vaginal fluid of agent(s) derived from indigenous bacteria that can activate the HIV-1 LTR, cytokine production, and NF-kappaB in cells of macrophage lineage, with possible influence on vaginal physiology and host defense. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 presence presence NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 vaginal vaginal ADJ JJ Degree=Pos _ _ _ _ 8 fluid fluid NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 agent agent NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 s s X AFX _ _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 derived derive VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 indigenous indigenous ADJ JJ Degree=Pos _ _ _ _ 17 bacteria bacteria NOUN NN Number=Sing _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 can can AUX MD VerbForm=Fin _ _ _ _ 20 activate activate VERB VB VerbForm=Inf _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 LTR Ltr NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 28 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 38 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 with with SCONJ IN _ _ _ _ _ 41 possible possible ADJ JJ Degree=Pos _ _ _ _ 42 influence influence NOUN NN Number=Sing _ _ _ _ 43 on on ADP IN _ _ _ _ _ 44 vaginal vaginal ADJ JJ Degree=Pos _ _ _ _ 45 physiology physiology NOUN NN Number=Sing _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 host host NOUN NN Number=Sing _ _ _ _ 48 defense defense NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6247 # text = Document 003001639 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001639 003001639 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6248 # text = Human T-cell leukemia virus type 1 Tax induction of NF-kappaB involves activation of the IkappaB kinase alpha (IKKalpha) and IKKbeta cellular kinases. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 type type NOUN NN Number=Sing _ _ _ _ 7 1 1 NUM CD NumType=Card _ _ _ _ 8 Tax tax NOUN NN Number=Sing _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 14 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ _ 19 kinase kinase NOUN NN Number=Sing _ _ _ _ 20 alpha alpha NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 IKKalpha IKKalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 IKKbeta IKKbeta PROPN NNP Number=Sing _ _ _ _ 26 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 27 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6249 # text = Tax corresponds to a 40-kDa transforming protein from the pathogenic retrovirus human T-cell leukemia virus type 1 (HTLV-1) that activates nuclear expression of the NF-kappaB/Rel family of transcription factors by an unknown mechanism. 1 Tax tax NOUN NN Number=Sing _ _ _ _ 2 corresponds correspond VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kDa kDa NOUN NN Number=Sing _ _ _ _ 8 transforming transforming VERB VBG VerbForm=Ger _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 pathogenic pathogenic NOUN NN Number=Sing _ _ _ _ 13 retrovirus retrovirus ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 18 virus virus NOUN NN Number=Sing _ _ _ _ 19 type type NOUN NN Number=Sing _ _ _ _ 20 1 1 NUM CD NumType=Card _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 that that PRON WDT PronType=Rel _ _ _ _ 27 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 36 Rel Rel PROPN NNP Number=Sing _ _ _ _ 37 family family NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 transcription transcription NOUN NN Number=Sing _ _ _ _ 40 factors factor NOUN NNS Number=Plur _ _ _ _ 41 by by ADP IN _ _ _ _ _ 42 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 unknown unknown ADJ JJ Degree=Pos _ _ _ _ 44 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 6250 # text = Tax expression promotes N-terminal phosphorylation and degradation of IkappaB alpha, a principal cytoplasmic inhibitor of NF-kappaB. 1 Tax tax NOUN NN Number=Sing _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 promotes promote NOUN NNS Number=Plur _ _ _ _ 4 N- N- PUNCT : _ _ _ _ SpaceAfter=No 5 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 6 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 degradation degradation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ _ 11 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 principal principal ADJ JJ Degree=Pos _ _ _ _ 15 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 16 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 6251 # text = Our studies now demonstrate that HTLV-1 Tax activates the recently identified cellular kinases IkappaB kinase alpha (IKKalpha) and IKKbeta, which normally phosphorylate IkappaB alpha on both of its N-terminal regulatory serines in response to tumor necrosis factor alpha (TNF-alpha) and interleukin-1 (IL-1) stimulation. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 now now ADV RB _ _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 Tax Tax NOUN NN Number=Sing _ _ _ _ 10 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 recently recently ADV RB _ _ _ _ _ 13 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 15 kinases kinase NOUN NNS Number=Plur _ _ _ _ 16 IkappaB Ikappab PROPN NNP Number=Sing _ _ _ _ 17 kinase kinase NOUN NN Number=Sing _ _ _ _ 18 alpha alpha NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 IKKalpha IKKalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 IKKbeta IKKbeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 which which PRON WDT PronType=Rel _ _ _ _ 26 normally normally ADV RB _ _ _ _ _ 27 phosphorylate phosphorylate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 IkappaB Ikappab ADJ JJ Degree=Pos _ _ _ _ 29 alpha alpha NOUN NN Number=Sing _ _ _ _ 30 on on ADP IN _ _ _ _ _ 31 both both DET DT _ _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 34 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 36 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 37 serines serine NOUN NNS Number=Plur _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 response response NOUN NN Number=Sing _ _ _ _ 40 to to ADP IN _ _ _ _ _ 41 tumor tumor NOUN NN Number=Sing _ _ _ _ 42 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 43 factor factor NOUN NN Number=Sing _ _ _ _ 44 alpha alpha NOUN NN Number=Sing _ _ _ _ 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 ) ) PUNCT -RRB- _ _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 1 1 NUM CD NumType=Card _ _ _ _ 54 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 55 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 57 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 58 ) ) PUNCT -RRB- _ _ _ _ _ 59 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 6252 # text = In contrast, a mutant of Tax termed M22, which does not induce NF-kappaB, fails to activate either IKKalpha or IKKbeta. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 mutant mutant NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Tax tax PROPN NNP Number=Sing _ _ _ _ 8 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 M22 m22 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 induce induce VERB VB VerbForm=Inf _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 fails fail VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 activate activate VERB VB VerbForm=Inf _ _ _ _ 22 either either CCONJ CC _ _ _ _ _ 23 IKKalpha IKKalpha PROPN NNP Number=Sing _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 IKKbeta IKKbeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 6253 # text = Furthermore, endogenous IKK enzymatic activity was significantly elevated in HTLV-1-infected and Tax-expressing T-cell lines. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 4 IKK IKK PROPN NNP Number=Sing _ _ _ _ 5 enzymatic enzymatic ADJ JJ Degree=Pos _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 significantly significantly ADV RB _ _ _ _ _ 9 elevated elevate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 20 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 6254 # text = Transfection of kinase-deficient mutants of IKKalpha and IKKbeta into either human Jurkat T or 293 cells also inhibits NF-kappaB-dependent reporter gene expression induced by Tax. 1 Transfection Transfection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 6 mutants mutant NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 IKKalpha IKKalpha PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 IKKbeta IKKbeta PROPN NNP Number=Sing _ _ _ _ 11 into into ADP IN _ _ _ _ _ 12 either either DET DT _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 15 T T PROPN NNP Number=Sing _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 293 293 NUM CD NumType=Card _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 also also ADV RB _ _ _ _ _ 20 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 26 reporter reporter NOUN NN Number=Sing _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 Tax Tax PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 6255 # text = Similarly, a kinase-deficient mutant of NIK (NF-kappaB-inducing kinase), which represents an upstream kinase in the TNF-alpha and IL-1 signaling pathways leading to IKKalpha and IKKbeta activation, blocks Tax induction of NF-kappaB. 1 Similarly similarly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 7 mutant mutant NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NIK NIK PROPN NNP Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 inducing induce ADJ JJ Degree=Pos _ _ _ _ 16 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 represents represent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 23 kinase kinase NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 alpha alpha NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ _ 33 signaling signaling NOUN NN Number=Sing _ _ _ _ 34 pathways pathway NOUN NNS Number=Plur _ _ _ _ 35 leading lead VERB VBG VerbForm=Ger _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 IKKalpha IKKalpha PROPN NNP Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 IKKbeta IKKbeta PROPN NNP Number=Sing _ _ _ _ 40 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 blocks block NOUN NNS Number=Plur _ _ _ _ 43 Tax tax NOUN NN Number=Sing _ _ _ _ 44 induction induction NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 6256 # text = However, plasma membrane-proximal elements in these proinflammatory cytokine pathways are apparently not involved since dominant negative mutants of the TRAF2 and TRAF6 adaptors, which effectively block signaling through the cytoplasmic tails of the TNF-alpha and IL-1 receptors, respectively, do not inhibit Tax induction of NF-kappaB. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 plasma plasma NOUN NN Number=Sing _ _ _ _ 4 membrane membrane NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 7 elements element NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 10 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 11 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 12 pathways pathway NOUN NNS Number=Plur _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 apparently apparently ADV RB _ _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 involved involved ADJ JJ Degree=Pos _ _ _ _ 17 since since SCONJ IN _ _ _ _ _ 18 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 19 negative negative ADJ JJ Degree=Pos _ _ _ _ 20 mutants mutant NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 TRAF2 TRAF2 NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 TRAF6 TRAF6 NUM CD NumType=Card _ _ _ _ 26 adaptors adaptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 which which PRON WDT PronType=Rel _ _ _ _ 29 effectively effectively ADV RB _ _ _ _ _ 30 block block VERB VB VerbForm=Inf _ _ _ _ 31 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 32 through through ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 35 tails tail NOUN NNS Number=Plur _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 TNF Tnf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 alpha alpha PROPN NNP Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT , _ _ _ _ SpaceAfter=No 44 1 1 NUM CD NumType=Card _ _ _ _ 45 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 do do AUX VB Mood=Imp|VerbForm=Fin _ _ _ _ 50 not not PART RB _ _ _ _ _ 51 inhibit inhibit VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 52 Tax tax NOUN NN Number=Sing _ _ _ _ 53 induction induction NOUN NN Number=Sing _ _ _ _ 54 of of ADP IN _ _ _ _ _ 55 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 56 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 57 kappaB. kappaB. PROPN NNP Number=Sing _ _ _ _ # sent_id = 6257 # text = Together, these studies demonstrate that HTLV-1 Tax exploits a distal part of the proinflammatory cytokine signaling cascade leading to induction of NF-kappaB. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ _ 5 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 Tax Tax NOUN NN Number=Sing _ _ _ _ 11 exploits exploit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 distal distal ADJ JJ Degree=Pos _ _ _ _ 14 part part NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 18 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 19 signaling signale NOUN NN Number=Sing _ _ _ _ 20 cascade cascade NOUN NN Number=Sing _ _ _ _ 21 leading lead VERB VBG VerbForm=Ger _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 induction induction NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 6258 # text = The pathological alteration of this cytokine pathway leading to NF-kappaB activation by Tax may play a central role in HTLV-1-mediated transformation of human T cells, clinically manifested as the adult T-cell leukemia. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 pathological pathological ADJ JJ Degree=Pos _ _ _ _ 3 alteration alteration NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 7 pathway pathway NOUN NN Number=Sing _ _ _ _ 8 leading lead VERB VBG VerbForm=Ger _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 Tax tax PROPN NNP Number=Sing _ _ _ _ 16 may may AUX MD VerbForm=Fin _ _ _ _ 17 play play VERB VB VerbForm=Inf _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 central central ADJ JJ Degree=Pos _ _ _ _ 20 role role NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 transformation transformation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 T T PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 clinically clinically ADV RB _ _ _ _ _ 34 manifested manifest VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 as as ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 adult adult NOUN NN Number=Sing _ _ _ _ 38 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6259 # text = Document 003001644 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001644 003001644 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6260 # text = A cell type-specific enhancer in the human B7.1 gene regulated by NF-kappaB. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 B7.1 b7.1 NOUN NN Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6261 # text = The costimulatory molecule B7.1 provides a second signal critical for T cell activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 3 molecule molecule NOUN NN Number=Sing _ _ _ _ 4 B7.1 b7.1 NOUN NN Number=Sing _ _ _ _ 5 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 8 signal signal NOUN NN Number=Sing _ _ _ _ 9 critical critical ADJ JJ Degree=Pos _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 T t NUM CD NumType=Card _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 6262 # text = The distribution of this integral membrane protein is restricted to certain tissues where its level of expression is modulated by multiple exogenous stimuli. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 distribution distribution NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 integral integral ADJ JJ Degree=Pos _ _ _ _ 6 membrane membrane NOUN NN Number=Sing _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 restricted restrict VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 certain certain ADJ JJ Degree=Pos _ _ _ _ 12 tissues tissue NOUN NNS Number=Plur _ _ _ _ 13 where where ADV WRB PronType=Rel _ _ _ _ 14 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 15 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 level level NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 modulated modulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 23 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 24 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 6263 # text = To identify the molecular basis for specificity and inducibility, the chromatin configuration of the human B7.1 gene was examined in intact nuclei from various cell types. 1 To to PART TO _ _ _ _ _ 2 identify identify VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 5 basis basis NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 specificity specificity NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 inducibility inducibility NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 13 configuration configuration NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 B7.1 b7.1 NOUN NN Number=Sing _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 intact intact ADJ JJ Degree=Pos _ _ _ _ 23 nuclei nuclei NOUN NNS Number=Plur _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 various various ADJ JJ Degree=Pos _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 6264 # text = The identification of a tissue-specific deoxyribonuclease I hypersensitive site approximately 3kb upstream of the transcription start site led to the characterization of a cell type-specific enhancer region. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 identification identification NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 deoxyribonuclease deoxyribonuclease NOUN NN Number=Sing _ _ _ _ 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 hypersensitive hypersensitive VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 site site NOUN NN Number=Sing _ _ _ _ 12 approximately approximately ADV RB _ _ _ _ _ 13 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 kb kb NOUN NN Number=Sing _ _ _ _ 15 upstream upstream NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 start start NOUN NN Number=Sing _ _ _ _ 20 site site NOUN NN Number=Sing _ _ _ _ 21 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 characterization characterization NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 specific specific ADJ JJ Degree=Pos _ _ _ _ 31 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 32 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 6265 # text = This 183-bp region was both cell type specific and responsive to two distinct stimuli, lipopolysaccharide and dibutyryl cAMP, known to regulate B7.1 expression. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 183 183 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 bp bp NOUN NN Number=Sing _ _ _ _ 5 region region NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 both both DET DT _ _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 type type NOUN NN Number=Sing _ _ _ _ 10 specific specific ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 two two NUM CD NumType=Card _ _ _ _ 15 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 16 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 dibutyryl dibutyryl NOUN NN Number=Sing _ _ _ _ 21 cAMP camp NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 26 B7.1 B7.1 NUM CD NumType=Card _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 6266 # text = Deletional and site-directed mutagenesis revealed the presence of multiple functionally critical cis elements within this region, one of which was a nuclear factor (NF)-kappaB consensus sequence. 1 Deletional Deletional ADJ JJ Degree=Pos _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 mutagenesis mutagenesis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 7 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 presence presence NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 12 functionally functionally ADV RB _ _ _ _ _ 13 critical critical ADJ JJ Degree=Pos _ _ _ _ 14 cis cis NOUN NN Number=Sing _ _ _ _ 15 elements element NOUN NNS Number=Plur _ _ _ _ 16 within within ADP IN _ _ _ _ _ 17 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 18 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 one one NUM CD NumType=Card _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 32 consensus consensus NOUN NN Number=Sing _ _ _ _ 33 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 6267 # text = In B7.1-positive B cells, this element bound several members of the NF-kappaB family, transcription factors already implicated in signal transduction pathways relevant to B7.1 expression. 1 In in ADP IN _ _ _ _ _ 2 B7.1 B7.1 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT : _ _ _ _ SpaceAfter=No 4 positive positive ADJ JJ Degree=Pos _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 9 element element NOUN NN Number=Sing _ _ _ _ 10 bound bound ADJ JJ Degree=Pos _ _ _ _ 11 several several ADJ JJ Degree=Pos _ _ _ _ 12 members member NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 18 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factors factor NOUN NNS Number=Plur _ _ _ _ 22 already already ADV RB _ _ _ _ _ 23 implicated implicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 signal signal NOUN NN Number=Sing _ _ _ _ 26 transduction transduction NOUN NN Number=Sing _ _ _ _ 27 pathways pathway NOUN NNS Number=Plur _ _ _ _ 28 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 B7.1 B7.1 NUM CD NumType=Card _ _ _ _ 31 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 6268 # text = This is the first description, to our knowledge, of regulatory elements that control expression of a gene encoding a B7 costimulatory molecule. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 5 description description NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 9 knowledge knowledge NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 13 elements element NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 control control VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ _ 20 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 B7 B7 NUM CD NumType=Card _ _ _ _ 23 costimulatory costimulatory NOUN NN Number=Sing _ _ _ _ 24 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6269 # text = Document 003001645 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001645 003001645 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6270 # text = Transcriptional analysis of Epstein-Barr virus gene expression in EBV-positive gastric carcinoma: unique viral latency in the tumour cells. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 Barr Barr PROPN NNP Number=Sing _ _ _ _ 7 virus virus NOUN NN Number=Sing _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 positive positive ADJ JJ Degree=Pos _ _ _ _ 14 gastric gastric ADJ JJ Degree=Pos _ _ _ _ 15 carcinoma carcinoma NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 : : PUNCT : _ _ _ _ _ 17 unique unique ADJ JJ Degree=Pos _ _ _ _ 18 viral viral ADJ JJ Degree=Pos _ _ _ _ 19 latency latency NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 tumour tumour NOUN NN Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6271 # text = Although case-oriented evidence for an association of Epstein-Barr virus (EBV) with gastric carcinoma has been accumulating recently, the interaction(s) between EBV and gastric epithelial cells is/are largely unknown. 1 Although although SCONJ IN _ _ _ _ _ 2 case case NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 oriented oriented ADJ JJ Degree=Pos _ _ _ _ 5 evidence evidence NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 association association NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 Barr Barr PROPN NNP Number=Sing _ _ _ _ 13 virus virus NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 gastric gastric ADJ JJ Degree=Pos _ _ _ _ 19 carcinoma carcinoma NOUN NN Number=Sing _ _ _ _ 20 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 22 accumulating accumulate VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 23 recently recently ADV RB _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 interaction interaction NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 s s X AFX _ _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 between between ADP IN _ _ _ _ _ 31 EBV EBV PROPN NNP Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 gastric gastric ADJ JJ Degree=Pos _ _ _ _ 34 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ _ 36 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 37 / / PUNCT , _ _ _ _ SpaceAfter=No 38 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 39 largely largely ADV RB _ _ _ _ _ 40 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 6272 # text = In this study, we examined seven EBV-positive gastric carcinoma tissues for viral gene expression at the mRNA level, from which studies on the EBV oncogenicity in human epithelial cells will benefit. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 seven seven NUM CD NumType=Card _ _ _ _ 8 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - SYM SYM _ _ _ _ SpaceAfter=No 10 positive positive ADJ JJ Degree=Pos _ _ _ _ 11 gastric gastric ADJ JJ Degree=Pos _ _ _ _ 12 carcinoma carcinoma NOUN NN Number=Sing _ _ _ _ 13 tissues tissue NOUN NNS Number=Plur _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 viral viral ADJ JJ Degree=Pos _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 at at ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 21 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 studies study NOUN NNS Number=Plur _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 EBV EBV PROPN NNP Number=Sing _ _ _ _ 29 oncogenicity oncogenicity NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 human human ADJ JJ Degree=Pos _ _ _ _ 32 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ _ 34 will will AUX MD VerbForm=Fin _ _ _ _ 35 benefit benefit VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 6273 # text = Reverse transcription-PCR analysis showed that all seven EBV-positive tumour tissues constitutively expressed EBV nuclear antigen (EBNA) 1 mRNA, but not EBNA2 mRNA. 1 Reverse reverse NOUN NN Number=Sing _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 PCR Pcr NOUN NN Number=Sing _ _ _ _ 5 analysis analysis NOUN NN Number=Sing _ _ _ _ 6 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 all all DET DT _ _ _ _ _ 9 seven seven ADJ JJ Degree=Pos _ _ _ _ 10 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 positive positive ADJ JJ Degree=Pos _ _ _ _ 13 tumour tumour NOUN NN Number=Sing _ _ _ _ 14 tissues tissue NOUN NNS Number=Plur _ _ _ _ 15 constitutively constitutively ADV RB _ _ _ _ _ 16 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 EBV EBV PROPN NNP Number=Sing _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 antigen antigen NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 1 1 NUM CD NumType=Card _ _ _ _ 24 mRNA mRNA NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 but but CCONJ CC _ _ _ _ _ 27 not not ADV RB _ _ _ _ _ 28 EBNA2 EBNA2 NUM CD NumType=Card _ _ _ _ 29 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 6274 # text = The EBNA transcription was initiated from one of three EBNA promoters, Qp: by contrast, both Cp and Wp were silent, thus resulting in the lack of EBNA2 mRNA. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 EBNA EBNA PROPN NNP Number=Sing _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 initiated initiate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 one one NUM CD NumType=Card _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 three three NUM CD NumType=Card _ _ _ _ 10 EBNA EBNA PROPN NNP Number=Sing _ _ _ _ 11 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 Qp Qp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 : : PUNCT : _ _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 both both CCONJ CC _ _ _ _ _ 19 Cp cp PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 Wp Wp PROPN NNP Number=Sing _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 silent silent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 thus thus ADV RB _ _ _ _ _ 26 resulting result VERB VBG VerbForm=Ger _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 lack lack NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 EBNA2 EBNA2 NUM CD NumType=Card _ _ _ _ 32 mRNA. mRNA. PROPN NNP Number=Sing _ _ _ _ # sent_id = 6275 # text = Latent membrane protein (LMP) 2A mRNA was detected in three of seven cases; however, neither LMP1 nor LMP2B mRNA was detected in any of the tumours tested. 1 Latent Latent ADJ JJ Degree=Pos _ _ _ _ 2 membrane membrane NOUN NN Number=Sing _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 LMP LMP NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 A a PROPN NNP Number=Sing _ _ _ _ 9 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 three three NUM CD NumType=Card _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 seven seven NUM CD NumType=Card _ _ _ _ 16 cases case NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 ; ; PUNCT , _ _ _ _ _ 18 however however ADV RB _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 neither neither CCONJ CC _ _ _ _ _ 21 LMP1 LMP1 NUM CD NumType=Card _ _ _ _ 22 nor nor CCONJ CC _ _ _ _ _ 23 LMP2 LMP2 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 B b NOUN NN Number=Sing _ _ _ _ 25 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 any any DET DT _ _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 tumours tumour NOUN NNS Number=Plur _ _ _ _ 33 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 6276 # text = Transcripts from the BamHI-A region of the viral genome were detectable in all cases. 1 Transcripts transcript NOUN NNS Number=Plur _ _ _ _ 2 from from ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 BamHI BamHI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 region region NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 viral viral ADJ JJ Degree=Pos _ _ _ _ 11 genome genome NOUN NN Number=Sing _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 all all DET DT _ _ _ _ _ 16 cases case NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 6277 # text = BZLF1 mRNA and the product, an immediate-early gene for EBV replication, was not expressed in any of them, thereby suggesting that the tumour cells carried EBV genomes in a tightly latent form. 1 BZLF1 BZLF1 PROPN NNP Number=Sing _ _ _ _ 2 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 product product NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 early early ADJ JJ Degree=Pos _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 EBV EBV PROPN NNP Number=Sing _ _ _ _ 14 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 not not PART RB _ _ _ _ _ 18 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 any any DET DT _ _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 thereby thereby ADV RB _ _ _ _ _ 25 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 tumour tumour NOUN NN Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 carried carry VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 EBV EBV PROPN NNP Number=Sing _ _ _ _ 32 genomes genome NOUN NNS Number=Plur _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 tightly tightly ADV RB _ _ _ _ _ 36 latent latent ADJ JJ Degree=Pos _ _ _ _ 37 form form NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 6278 # text = These findings further extended our previous data regarding EBV latency in gastric carcinoma cells at the protein level, and have affirmed that the programme of viral gene expression in the tumour more closely resembles 'latency I' represented by Burkitt's lymphoma than 'latency II' represented by the majority of nasopharyngeal carcinomas. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 further further ADV RB _ _ _ _ _ 4 extended extend VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 6 previous previous ADJ JJ Degree=Pos _ _ _ _ 7 data data NOUN NN Number=Sing _ _ _ _ 8 regarding regard VERB VBG VerbForm=Ger _ _ _ _ 9 EBV EBV PROPN NNP Number=Sing _ _ _ _ 10 latency latency NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 gastric gastric ADJ JJ Degree=Pos _ _ _ _ 13 carcinoma carcinoma NOUN NN Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 at at ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 affirmed affirm VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 programme programme NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 viral viral ADJ JJ Degree=Pos _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 tumour tumour NOUN NN Number=Sing _ _ _ _ 33 more more ADV RBR _ _ _ _ _ 34 closely closely ADV RB _ _ _ _ _ 35 resembles resemble NOUN NNS Number=Plur _ _ _ _ 36 ' 's PART POS _ _ _ _ SpaceAfter=No 37 latency latency NOUN NN Number=Sing _ _ _ _ 38 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 39 ' ' PUNCT `` _ _ _ _ _ 40 represented represent VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 by by ADP IN _ _ _ _ _ 42 Burkitt Burkitt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 's 's PART POS _ _ _ _ _ 44 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 45 than than ADP IN _ _ _ _ _ 46 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 47 latency latency NOUN NN Number=Sing _ _ _ _ 48 II Ii NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 ' ' PUNCT '' _ _ _ _ _ 50 represented represent VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 51 by by ADP IN _ _ _ _ _ 52 the the DET DT Definite=Def|PronType=Art _ _ _ _ 53 majority majority NOUN NN Number=Sing _ _ _ _ 54 of of ADP IN _ _ _ _ _ 55 nasopharyngeal nasopharyngeal ADJ JJ Degree=Pos _ _ _ _ 56 carcinomas carcinoma NOUN NNS Number=Plur _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6279 # text = Document 003001650 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001650 003001650 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6280 # text = Differential interaction of nuclear factors with the PRE-I enhancer element of the human IL-4 promoter in different T cell subsets. 1 Differential differential ADJ JJ Degree=Pos _ _ _ _ 2 interaction interaction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factors factor NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 PRE pre NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 enhancer enhancer VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 4 4 NUM CD NumType=Card _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 different different ADJ JJ Degree=Pos _ _ _ _ 22 T T PROPN NNP Number=Sing _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 subsets subset NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6281 # text = The immunomodulatory cytokine IL-4 affects cells of most hemopoietic lineages. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 immunomodulatory immunomodulatory ADJ JJ Degree=Pos _ _ _ _ 3 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 4 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 4 4 NUM CD NumType=Card _ _ _ _ 7 affects affects NOUN NNS Number=Plur _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 most most ADJ JJS Degree=Sup _ _ _ _ 11 hemopoietic hemopoietic ADJ JJ Degree=Pos _ _ _ _ 12 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 6282 # text = IL-4 is secreted by activated Th2 but not Th1 cells and plays a major role in the immune response by modulating the differentiation of naive Th cells toward the Th2 phenotype. 1 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 secreted secret VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 Th2 Th2 NOUN NN Number=Sing _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 Th1 Th1 NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 major major ADJ JJ Degree=Pos _ _ _ _ 17 role role NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 immune immune ADJ JJ Degree=Pos _ _ _ _ 21 response response NOUN NN Number=Sing _ _ _ _ 22 by by SCONJ IN _ _ _ _ _ 23 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 naive naive ADJ JJ Degree=Pos _ _ _ _ 28 Th th PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 toward toward ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 Th2 th2 NUM CD NumType=Card _ _ _ _ 33 phenotype phenotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 6283 # text = We have previously identified an enhancer element, PRE-I, that is essential for the function of the human IL-4 promoter. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 7 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 PRE pre NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 essential essential ADJ JJ Degree=Pos _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 function function NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 4 4 NUM CD NumType=Card _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 6284 # text = To investigate the mechanisms responsible for tissue-specific expression of the IL-4 gene, we analyzed nuclear factors binding to the PRE-I site and compared the binding activities of these factors to the IL-4 promoter of Th1 and Th2 cells. 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 4 4 NUM CD NumType=Card _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 19 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 factors factor NOUN NNS Number=Plur _ _ _ _ 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 PRE pre NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 28 site site VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 binding bind VERB VBG VerbForm=Ger _ _ _ _ 33 activities activity NOUN NNS Number=Plur _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 36 factors factor NOUN NNS Number=Plur _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT , _ _ _ _ SpaceAfter=No 41 4 4 NUM CD NumType=Card _ _ _ _ 42 promoter promoter NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 Th1 Th1 NUM CD NumType=Card _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 Th2 Th2 NUM CD NumType=Card _ _ _ _ 47 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 6285 # text = We show that PRE-I interacts with PMA- and PMA/ionomycin-inducible, cyclosporin A-sensitive nuclear factors. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 PRE pre NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 interacts interact NOUN NNS Number=Plur _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 PMA/ionomycin PMA/ionomycin ADP IN _ _ _ _ SpaceAfter=No 13 -inducible -inducible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 16 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 6286 # text = Using anti-C/EBPbeta (NF-IL6), anti-C/EBPdelta (NF-IL6beta), anti-NF-ATc, anti-NF-ATp, anti-Fos, and anti-Jun 1 Using Using PROPN NNP Number=Sing _ _ _ _ 2 anti-C/EBPbeta anti-C/EBPbeta PROPN NNP Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 IL6 Il6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 anti-C/EBPdelta anti-C/EBPdelta PROPN NNP Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 IL6 Il6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 anti-NF anti-NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 ATc ATc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 anti-NF anti-NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 ATp ATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 anti-Fos anti-Fos PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 anti-Jun anti-Jun ADJ JJ Degree=Pos _ _ _ _ # sent_id = 6287 # text = Abs we demonstrate that the previously identified PRE-I binding factor POS-1 is composed of different transcription factors in different Th cell subsets. 1 Abs Ab ADV RB _ _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 previously previously ADV RB _ _ _ _ _ 7 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 PRE pre NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 POS Pos NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 different different ADJ JJ Degree=Pos _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factors factor NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 different different ADJ JJ Degree=Pos _ _ _ _ 24 Th th PROPN NNP Number=Sing _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 subsets subset NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 6288 # text = In the IL-4-producing 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 producing producing NOUN NN Number=Sing _ _ _ _ # sent_id = 6289 # text = Th0-like human Jurkat and mouse EL-4 cells, POS-1 (designated POS-1a) contains NF-IL6beta and Jun. 1 Th0 Th0 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 like like ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 mouse mouse NOUN NN Number=Sing _ _ _ _ 8 EL EL NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 4 4 NUM CD NumType=Card _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 POS Pos NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 POS Pos NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 a a NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 IL6 Il6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 beta beta PROPN NNP Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 6290 # text = In the mouse Th2 D10 cells and in the human Th2 clones, POS-1 (designated POS-1b) contains NF-IL6beta, Jun, and NF-ATc/p. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 mouse mouse NOUN NN Number=Sing _ _ _ _ 4 Th2 Th2 NUM CD NumType=Card _ _ _ _ 5 D10 D10 NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 Th2 Th2 NOUN NN Number=Sing _ _ _ _ 12 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 POS Pos NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 POS Pos NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 b b NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 IL6 IL6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 ATc/ ATcith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 36 p p NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 6291 # text = In contrast, POS-1 was not found in nuclear extracts of human Th1 clones. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 POS Pos NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 extracts extract NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 Th1 Th1 NUM CD NumType=Card _ _ _ _ 16 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 6292 # text = These findings suggest that PRE-I may play a role in the differential regulation of IL-4 gene expression levels. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 PRE pre NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 8 may may AUX MD VerbForm=Fin _ _ _ _ 9 play play VERB VB VerbForm=Inf _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 differential differential ADJ JJ Degree=Pos _ _ _ _ 15 regulation regulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 4 4 NUM CD NumType=Card _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6293 # text = Document 003001654 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001654 003001654 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6294 # text = Inhibition of protein phosphatases by okadaic acid induces AP1 in human T cells. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 7 acid acid ADJ JJ Degree=Pos _ _ _ _ 8 induces induce NOUN NNS Number=Plur _ _ _ _ 9 AP1 AP1 NUM CD NumType=Card _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6295 # text = To examine the role of protein phosphatases in T cell activation, Jurkat cells were treated with okadaic acid, an inhibitor of type 1 and 2A phosphatases, and nuclear extracts were examined for the presence of AP1 as a measure of early T cell activation. 1 To to PART TO _ _ _ _ _ 2 examine examine VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 Jurkat Jurkat SCONJ IN _ _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 treated treat VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 19 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 type type NOUN NN Number=Sing _ _ _ _ 25 1 1 NUM CD NumType=Card _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 A a NOUN NN Number=Sing _ _ _ _ 29 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 33 extracts extract NOUN NNS Number=Plur _ _ _ _ 34 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 for for ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 presence presence NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 AP1 AP1 NUM CD NumType=Card _ _ _ _ 41 as as ADP IN _ _ _ _ _ 42 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 measure measure NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 early early ADJ JJ Degree=Pos _ _ _ _ 46 T t PROPN NNP Number=Sing _ _ _ _ 47 cell cell NOUN NN Number=Sing _ _ _ _ 48 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 6296 # text = Okadaic acid was found to be a potent inducer of AP1. 1 Okadaic Okadaic ADJ JJ Degree=Pos _ _ _ _ 2 acid acid NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 potent potent ADJ JJ Degree=Pos _ _ _ _ 9 inducer inducer NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 AP1 AP1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 6297 # text = In contrast to phorbol esters such as phorbol myristate acetate (PMA), the induction of AP1 by okadaic acid occurs predominantly by transcriptional activation of the jun and fos family of proto-oncogenes. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 phorbol phorbol VERB VB VerbForm=Inf _ _ _ _ 5 esters ester NOUN NNS Number=Plur _ _ _ _ 6 such such ADJ JJ Degree=Pos _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 9 myristate myristate NOUN NN Number=Sing _ _ _ _ 10 acetate acetate NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 AP1 AP1 NUM CD NumType=Card _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 21 acid acid ADJ JJ Degree=Pos _ _ _ _ 22 occurs occur NOUN NNS Number=Plur _ _ _ _ 23 predominantly predominantly ADV RB _ _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 jun jun NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 fos fo NOUN NNS Number=Plur _ _ _ _ 32 family family NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 oncogenes oncogene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 6298 # text = Surprisingly, while the addition of phytohemagglutinin further enhanced the induction of AP1, the addition of PMA inhibited it. 1 Surprisingly surprisingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 while while SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 addition addition NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 phytohemagglutinin phytohemagglutinin NOUN NN Number=Sing _ _ _ _ 8 further further ADV RB _ _ _ _ _ 9 enhanced enhance VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 induction induction NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 AP1 AP1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 addition addition NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 PMA PMA PROPN NNP Number=Sing _ _ _ _ 19 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 it it PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 6299 # text = Okadaic acid treatment was found to dramatically increase mRNA transcripts of the jun family of proto-oncogenes including c-jun, junD, and junB and to a lesser extent the fos family including c-fos and fra-1. 1 Okadaic Okadaic ADJ JJ Degree=Pos _ _ _ _ 2 acid acid ADJ JJ Degree=Pos _ _ _ _ 3 treatment treatment NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 dramatically dramatically ADV RB _ _ _ _ _ 8 increase increase VERB VB VerbForm=Inf _ _ _ _ 9 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 10 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 jun jun ADJ JJ Degree=Pos _ _ _ _ 14 family family NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 -oncogenes -oncogene NOUN NNS Number=Plur _ _ _ _ 18 including include VERB VBG VerbForm=Ger _ _ _ _ 19 c- c- PUNCT : _ _ _ _ SpaceAfter=No 20 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 junD jund NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 junB junB PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 lesser lesser ADJ JJR Degree=Cmp _ _ _ _ 30 extent extent NOUN NN Number=Sing _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 fos fo NOUN NNS Number=Plur _ _ _ _ 33 family family NOUN NN Number=Sing _ _ _ _ 34 including include VERB VBG VerbForm=Ger _ _ _ _ 35 c- c- PUNCT : _ _ _ _ SpaceAfter=No 36 fos fo NOUN NNS Number=Plur _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 fra fra NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 6300 # text = By comparison, PMA is a very inefficient inducer of the jun gene family in Jurkat cells. 1 By by ADP IN _ _ _ _ _ 2 comparison comparison NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 PMA PMA PROPN NNP Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 very very ADV RB _ _ _ _ _ 8 inefficient inefficient ADJ JJ Degree=Pos _ _ _ _ 9 inducer inducer NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 jun jun ADJ JJ Degree=Pos _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 family family NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 6301 # text = Similar to its effect on the induction of AP1 by okadaic acid, PMA inhibits the induction of c-jun mRNA by okadaic acid. 1 Similar similar VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 it it PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 4 s be PART POS _ _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 induction induction NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 AP1 AP1 NUM CD NumType=Card _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 13 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 PMA PMA PROPN NNP Number=Sing _ _ _ _ 16 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 induction induction NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 c- c- SYM NFP _ _ _ _ SpaceAfter=No 21 jun jun NOUN NN Number=Sing _ _ _ _ 22 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 25 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 6302 # text = Transfection of c-jun promoter constructs confirmed the marked difference between PMA and okadaic acid in inducing c-jun transcription. 1 Transfection Transfection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 c- c- SYM NFP _ _ _ _ SpaceAfter=No 4 jun jun NOUN NN Number=Sing _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ _ 6 constructs construct NOUN NNS Number=Plur _ _ _ _ 7 confirmed confirm VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 difference difference NOUN NN Number=Sing _ _ _ _ 11 between between ADP IN _ _ _ _ _ 12 PMA PMA PROPN NNP Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 15 acid acid NOUN NN Number=Sing _ _ _ _ 16 in in SCONJ IN _ _ _ _ _ 17 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 18 c- c- SYM NFP _ _ _ _ SpaceAfter=No 19 jun jun NOUN NN Number=Sing _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 6303 # text = The induction of AP1 by okadaic acid suggests that protein phosphatases 1 and 2A (PP1 and PP2A) may be involved in T cell activation as important negative regulators of the transcription factor AP1. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 AP1 AP1 NUM CD NumType=Card _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 7 acid acid NOUN NN Number=Sing _ _ _ _ 8 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ _ 12 1 1 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 A a NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 PP1 PP1 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 PP2 PP2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 may may AUX MD VerbForm=Fin _ _ _ _ 23 be be AUX VB VerbForm=Inf _ _ _ _ 24 involved involved ADJ JJ Degree=Pos _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 T t PROPN NNP Number=Sing _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 as as ADP IN _ _ _ _ _ 30 important important ADJ JJ Degree=Pos _ _ _ _ 31 negative negative ADJ JJ Degree=Pos _ _ _ _ 32 regulators regulator NOUN NNS Number=Plur _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 transcription transcription NOUN NN Number=Sing _ _ _ _ 36 factor factor NOUN NN Number=Sing _ _ _ _ 37 AP1 Ap1 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6304 # text = Document 003001656 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001656 003001656 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6305 # text = Molecular mechanisms of anoxia/reoxygenation-induced neutrophil adherence to cultured endothelial cells. 1 Molecular Molecular ADJ JJ Degree=Pos _ _ _ _ 2 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 anoxia/ anoxia/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 5 reoxygenation reoxygenation NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 9 adherence adherence NOUN NN Number=Sing _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 cultured cultured ADJ JJ Degree=Pos _ _ _ _ 12 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6306 # text = The objectives of this study were to (1) determine the time course of neutrophil adhesion to monolayers of human umbilical vein endothelial cells (HUVECs) that were exposed to 60 minutes of anoxia followed by 30 to 600 minutes of reoxygenation and (2) define the mechanisms responsible for both the early (minutes) and late (hours) hyperadhesivity of postanoxic HUVECs to human neutrophils. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 objectives objective NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 study study NOUN NN Number=Sing _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 1 1 X LS _ _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 determine determine VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 time time NOUN NN Number=Sing _ _ _ _ 14 course course NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 17 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 monolayers monolayer NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 23 vein vein NOUN NN Number=Sing _ _ _ _ 24 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 that that PRON WDT PronType=Rel _ _ _ _ 30 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 exposed expose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 60 60 NUM CD NumType=Card _ _ _ _ 34 minutes minute NOUN NNS Number=Plur _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 anoxia anoxia NOUN NN Number=Sing _ _ _ _ 37 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 by by ADP IN _ _ _ _ _ 39 30 30 NUM CD NumType=Card _ _ _ _ 40 to to ADP IN _ _ _ _ _ 41 600 600 NUM CD NumType=Card _ _ _ _ 42 minutes minute NOUN NNS Number=Plur _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 reoxygenation reoxygenation NOUN NN Number=Sing _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 2 2 X LS _ _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ _ 49 define define VERB VB VerbForm=Inf _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 52 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 53 for for ADP IN _ _ _ _ _ 54 both both CCONJ CC _ _ _ _ _ 55 the the DET DT Definite=Def|PronType=Art _ _ _ _ 56 early early ADJ JJ Degree=Pos _ _ _ _ 57 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 58 minutes minute NOUN NNS Number=Plur _ _ _ SpaceAfter=No 59 ) ) PUNCT -RRB- _ _ _ _ _ 60 and and CCONJ CC _ _ _ _ _ 61 late late ADJ JJ Degree=Pos _ _ _ _ 62 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 63 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 64 ) ) PUNCT -RRB- _ _ _ _ _ 65 hyperadhesivity hyperadhesivity NOUN NN Number=Sing _ _ _ _ 66 of of ADP IN _ _ _ _ _ 67 postanoxic postanoxic ADJ JJ Degree=Pos _ _ _ _ 68 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ _ 69 to to ADP IN _ _ _ _ _ 70 human human ADJ JJ Degree=Pos _ _ _ _ 71 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 72 . . PUNCT . _ _ _ _ _ # sent_id = 6307 # text = The results clearly demonstrate that anoxia/reoxygenation (A/R) leads to a biphasic increase in neutrophil adhesion to HUVECs, with peak responses occurring at 30 minutes (phase 1) and 240 minutes (phase 2) after reoxygenation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 clearly clearly ADV RB _ _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 anoxia/ anoxia/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 7 reoxygenation reoxygenation NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 A/ A/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 10 R r PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 biphasic biphasic ADJ JJ Degree=Pos _ _ _ _ 16 increase increase NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 19 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 peak peak NOUN NN Number=Sing _ _ _ _ 25 responses respons NOUN NNS Number=Plur _ _ _ _ 26 occurring occurre VERB VBG VerbForm=Ger _ _ _ _ 27 at at ADP IN _ _ _ _ _ 28 30 30 NUM CD NumType=Card _ _ _ _ 29 minutes minute NOUN NNS Number=Plur _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 phase phase NOUN NN Number=Sing _ _ _ _ 32 1 1 X LS _ _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 240 240 NUM CD NumType=Card _ _ _ _ 36 minutes minute NOUN NNS Number=Plur _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 phase phase NOUN NN Number=Sing _ _ _ _ 39 2 2 X LS _ _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 after after ADP IN _ _ _ _ _ 42 reoxygenation reoxygenation NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 6308 # text = Oxypurinol and catalase inhibited phase-1 adhesion, suggesting a role for xanthine oxidase and H2O2. 1 Oxypurinol Oxypurinol PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 catalase catalase VERB VB VerbForm=Inf _ _ _ _ 4 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 phase phase NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 xanthine xanthine NOUN NN Number=Sing _ _ _ _ 15 oxidase oxidase NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 H2 H2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 O2 O2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 6309 # text = In comparison, platelet activating factor (PAF) contributed to both phases of neutrophil adhesion. 1 In in ADP IN _ _ _ _ _ 2 comparison comparison NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 platelet platelet VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 5 activating activating VERB VBG VerbForm=Ger _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 PAF PAF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 contributed contribute VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 both both DET DT _ _ _ _ _ 13 phases phasis NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 16 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 6310 # text = Anti-intercellular adhesion molecule-1 (ICAM-1) and anti-P-selectin antibodies (monoclonal antibodies [mAbs]) attenuated phase-1 neutrophil adhesion, consistent with roles for constitutively expressed ICAM-1 and enhanced surface expression of preformed P-selectin. 1 Anti-intercellular Anti-intercellular ADJ JJ Degree=Pos _ _ _ _ 2 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 3 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT : _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 X LS _ _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 anti-P- anti-P- X GW _ _ _ _ SpaceAfter=No 13 selectin selectin ADJ JJ Degree=Pos _ _ _ _ 14 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 17 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 18 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 mAbs mAbs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 attenuated attenuate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 phase phase NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 27 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 roles role NOUN NNS Number=Plur _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 constitutively constitutively ADV RB _ _ _ _ _ 34 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 surface surface NOUN NN Number=Sing _ _ _ _ 41 expression expression NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 preformed preform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 P- p- NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 selectin selectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 6311 # text = Phase-2 neutrophil adhesion was attenuated by an anti-E-selectin mAb, indicating a dominant role of this adhesion molecule in the late phase response. 1 Phase phase NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 5 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 attenuated attenuate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 anti-E- anti-E- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 selectin selectin NOUN NN Number=Sing _ _ _ _ 12 mAb mAb NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 17 role role NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 20 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 21 molecule molecule NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 late late ADJ JJ Degree=Pos _ _ _ _ 25 phase phase NOUN NN Number=Sing _ _ _ _ 26 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 6312 # text = Pretreatment with actinomycin D and cycloheximide or with competing ds-oligonucleotides containing the nuclear factor-kappa B or activator protein-1 cognate DNA sequences significantly attenuated phase-2 response, suggesting a role for de novo macromolecule synthesis. 1 Pretreatment Pretreatment NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 actinomycin actinomycin NOUN NN Number=Sing _ _ _ _ 4 D d NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 with with SCONJ IN _ _ _ _ _ 9 competing compete VERB VBG VerbForm=Ger _ _ _ _ 10 ds d NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 -oligonucleotides -oligonucleotides SCONJ IN _ _ _ _ _ 12 containing contain VERB VBG VerbForm=Ger _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 activator activator NOUN NN Number=Sing _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 cognate cognate NOUN NN Number=Sing _ _ _ _ 25 DNA dna NOUN NN Number=Sing _ _ _ _ 26 sequences sequence NOUN NNS Number=Plur _ _ _ _ 27 significantly significantly ADV RB _ _ _ _ _ 28 attenuated attenuate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 phase phase NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ _ 32 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 role role NOUN NN Number=Sing _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 de de PROPN NNP Number=Sing _ _ _ _ 39 novo novo ADV RB _ _ _ _ _ 40 macromolecule macromolecule ADJ JJ Degree=Pos _ _ _ _ 41 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 6313 # text = Surface expression of ICAM-1, P-selectin, and E-selectin on HUVECs correlated with the phase-1 and -2 neutrophil adhesion responses. 1 Surface surface NOUN NN Number=Sing _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 ICAM ICAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 P- P- NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 selectin selectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 E- E- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 selectin selectin NOUN NN Number=Sing _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ _ 16 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 phase phase NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 26 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 27 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 6314 # text = Collectively, these findings indicate that A/R elicits a two-phase neutrophil-endothelial cell adhesion response that involves transcription-independent and transcription-dependent surface expression of different endothelial cell adhesion molecules. 1 Collectively collectively ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 findings finding NOUN NNS Number=Plur _ _ _ _ 5 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 A a DET DT Definite=Ind|PronType=Art _ _ _ SpaceAfter=No 8 /R /r NOUN NN Number=Sing _ _ _ _ 9 elicits elicit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 phase phase NOUN NN Number=Sing _ _ _ _ 14 neutrophil neutrophil NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 independent independent ADJ JJ Degree=Pos _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 29 surface surface NOUN NN Number=Sing _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 different different ADJ JJ Degree=Pos _ _ _ _ 33 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 36 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6315 # text = Document 003001658 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001658 003001658 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6316 # text = Costimulation of human CD4+ T cells with LFA-3 and B7 induce distinct effects on AP-1 and NF-kappa B transcription factors. 1 Costimulation Costimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 + + SYM SYM _ _ _ _ _ 6 T t NUM CD NumType=Card _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 LFA LFA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 3 3 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 B7 B7 NUM CD NumType=Card _ _ _ _ 14 induce induce NOUN NN Number=Sing _ _ _ _ 15 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 16 effects effect NOUN NNS Number=Plur _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6317 # text = We have earlier shown that stimulation of human CD4+ T cells with SEA presented on Chinese hamster ovary (CHO)-DR transfectants coexpressing either B7 or LFA-3 resulted in distinct cytokine profiles. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 earlier earlier ADV RB _ _ _ _ _ 4 shown shown VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 + + SYM SYM _ _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 SEA SEa NOUN NN Number=Sing _ _ _ _ 15 presented present VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 Chinese chinese ADJ JJ Degree=Pos _ _ _ _ 18 hamster hamster NOUN NN Number=Sing _ _ _ _ 19 ovary ovary NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 CHO cho PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 DR dr NOUN NN Number=Sing _ _ _ _ 25 transfectants transfectant NOUN NNS Number=Plur _ _ _ _ 26 coexpressing coexpresse VERB VBG VerbForm=Ger _ _ _ _ 27 either either CCONJ CC _ _ _ _ _ 28 B7 B7 NUM CD NumType=Card _ _ _ _ 29 or or CCONJ CC _ _ _ _ _ 30 LFA LFa NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 3 3 NUM CD NumType=Card _ _ _ _ 33 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 36 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 37 profiles profile NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 6318 # text = We now demonstrate that B7, but not LFA-3, strongly costimulated IL-2 transcription and mRNA expression in CD4+ T cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 now now ADV RB _ _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 B7 B7 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 but but CCONJ CC _ _ _ _ _ 8 not not ADV RB _ _ _ _ _ 9 LFA LFA ADV RB _ _ _ _ SpaceAfter=No 10 - - SYM SYM _ _ _ _ SpaceAfter=No 11 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 strongly strongly ADV RB _ _ _ _ _ 14 costimulated costimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 + + SYM SYM _ _ _ _ _ 25 T t NUM CD NumType=Card _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 6319 # text = Maximal increase in IL-2 transcription was recorded with CHO-DR/B7/LFA-3, suggesting a cooperative effect of B7 and LFA-3 at the transcriptional level. 1 Maximal Maximal ADJ JJ Degree=Pos _ _ _ _ 2 increase increase NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 recorded record VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 CHO Cho NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 DR/B7/LFA DR/B7/LFA NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 cooperative cooperative ADJ JJ Degree=Pos _ _ _ _ 20 effect effect NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 B7 B7 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 LFA LFA NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 3 3 NUM CD NumType=Card _ _ _ _ 27 at at ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 30 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 6320 # text = Gel-shift analysis demonstrated that stimulation of CD4+ T cells with CHO-DR and staphylococcal enterotoxin 1 Gel gel NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 + + SYM SYM _ _ _ _ _ 11 T t NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 CHO Cho PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 DR dr PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 staphylococcal staphylococcal ADJ JJ Degree=Pos _ _ _ _ 19 enterotoxin enterotoxin NOUN NN Number=Sing _ _ _ _ # sent_id = 6321 # text = A was sufficient to induce significant amounts of NF-kappa B binding proteins, whereas induction of AP-1 binding proteins required costimulation. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 induce induce VERB VB VerbForm=Inf _ _ _ _ 6 significant significant ADJ JJ Degree=Pos _ _ _ _ 7 amounts amount NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 whereas whereas SCONJ IN _ _ _ _ _ 17 induction induction NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 binding binding VERB VBG VerbForm=Ger _ _ _ _ 23 proteins protein NOUN NNS Number=Plur _ _ _ _ 24 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 costimulation costimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 6322 # text = LFA-3 induced moderate levels of AP-1, but did not influence the levels of NF-kappa B, while B7 costimulation strongly induced both AP-1 and substantially enhanced NF-kappa B binding proteins. 1 LFA Lfa INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 3 3 NUM CD NumType=Card _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 moderate moderate ADJ JJ Degree=Pos _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 influence influence VERB VB VerbForm=Inf _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 levels level NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa NOUN NN Number=Sing _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 while while SCONJ IN _ _ _ _ _ 25 B7 B7 NUM CD NumType=Card _ _ _ _ 26 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 27 strongly strongly ADV RB _ _ _ _ _ 28 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 both both DET DT _ _ _ _ _ 30 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 substantially substantially ADV RB _ _ _ _ _ 35 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 kappa kappa NOUN NN Number=Sing _ _ _ _ 39 B b NOUN NN Number=Sing _ _ _ _ 40 binding bind VERB VBG VerbForm=Ger _ _ _ _ 41 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 6323 # text = The CHO-DR/B7/LFA-3 triple transfectant induced a further increase in AP-1 and NF-kappa B binding proteins compared with the double transfectants. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 CHO Cho NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 DR/B7/LFA DR/B7/LFA NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 3 3 NUM CD NumType=Card _ _ _ _ 7 triple triple NOUN NN Number=Sing _ _ _ _ 8 transfectant transfectant NOUN NN Number=Sing _ _ _ _ 9 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 further further ADJ JJ Degree=Pos _ _ _ _ 12 increase increase NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ _ 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 proteins protein NOUN NNS Number=Plur _ _ _ _ 24 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 double double ADJ JJ Degree=Pos _ _ _ _ 28 transfectants transfectant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 6324 # text = The level of Oct-1 binding proteins remained similar in all samples. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 level level NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 binding binding VERB VBG VerbForm=Ger _ _ _ _ 8 proteins protein NOUN NNS Number=Plur _ _ _ _ 9 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 similar similar ADJ JJ Degree=Pos _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 all all DET DT _ _ _ _ _ 13 samples sample NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 6325 # text = Super-shift analysis revealed that the NF-kappa B complex of costimulated CD4+ T cells contained large amounts of p50, substantial amounts of p65, and marginal levels of c-Rel proteins. 1 Super super ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 shift shift ADJ JJ Degree=Pos _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 complex complex NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 costimulated costimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 + + SYM SYM _ _ _ _ _ 17 T t NUM CD NumType=Card _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 contained containe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 large large ADJ JJ Degree=Pos _ _ _ _ 21 amounts amount NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 substantial substantial ADJ JJ Degree=Pos _ _ _ _ 26 amounts amount NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 marginal marginal ADJ JJ Degree=Pos _ _ _ _ 32 levels level NOUN NNS Number=Plur _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 Rel Rel NOUN NN Number=Sing _ _ _ _ 37 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 6326 # text = The AP-1 binding proteins contained c-Jun, Jun-D, and Fra-1, but marginal amounts of Jun-B and c-Fos. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 binding binding VERB VBG VerbForm=Ger _ _ _ _ 6 proteins protein NOUN NNS Number=Plur _ _ _ _ 7 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 c c NOUN NN Abbr=Yes|Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 -D -D PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 Fra Fra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 marginal marginal ADJ JJ Degree=Pos _ _ _ _ 21 amounts amount NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 B B PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 c- c- SYM NFP _ _ _ _ SpaceAfter=No 28 Fos Fos PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 6327 # text = Our results indicate distinct effects of B7 and LFA-3 costimulation on the activity of AP-1 and NF-kappa B. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 B7 B7 NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 LFA LFa NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 3 3 NUM CD NumType=Card _ _ _ _ 12 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa NOUN NN Number=Sing _ _ _ _ 24 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 6328 # text = These may partly account for the differential effects of B7 and LFA-3 costimulation on IL-2 expression. 1 These these PRON DT Number=Plur|PronType=Dem _ _ _ _ 2 may may AUX MD VerbForm=Fin _ _ _ _ 3 partly partly ADV RB _ _ _ _ _ 4 account account VERB VB VerbForm=Inf _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 differential differential ADJ JJ Degree=Pos _ _ _ _ 8 effects effect NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 B7 B7 NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 LFA LFa NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 3 3 NUM CD NumType=Card _ _ _ _ 15 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6329 # text = Document 003001660 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001660 003001660 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6330 # text = The expression of c-fos, c-jun, and c-myc genes is regulated by heat shock in human lymphoid cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 c- c- SYM NFP _ _ _ _ SpaceAfter=No 9 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 c- c- SYM NFP _ _ _ _ SpaceAfter=No 13 myc myc ADJ JJ Degree=Pos _ _ _ _ 14 genes gene NOUN NNS Number=Plur _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 heat heat NOUN NN Number=Sing _ _ _ _ 19 shock shock NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6331 # text = The effect of heat shock on the expression of the nuclear protooncogenes c-fos, c-jun, and c-myc was studied in human lymphoid cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 heat heat NOUN NN Number=Sing _ _ _ _ 5 shock shock NOUN NN Number=Sing _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 protooncogenes protooncogene NOUN NNS Number=Plur _ _ _ _ 13 c- c- PUNCT : _ _ _ _ SpaceAfter=No 14 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 c- c- SYM NFP _ _ _ _ SpaceAfter=No 17 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 c- c- SYM NFP _ _ _ _ SpaceAfter=No 21 myc myc NOUN NN Number=Sing _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 6332 # text = Heat shock caused an increase in c-fos and c-jun mRNA levels and a decrease in c-myc mRNA levels in pre-B 1 Heat heat ADJ JJ Degree=Pos _ _ _ _ 2 shock shock NOUN NN Number=Sing _ _ _ _ 3 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 increase increase NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 fos fo NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 c- c- SYM NFP _ _ _ _ SpaceAfter=No 12 jun jun ADJ JJ Degree=Pos _ _ _ _ 13 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 14 levels level NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 decrease decrease NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 c- c- SYM NFP _ _ _ _ SpaceAfter=No 20 myc myc ADJ JJ Degree=Pos _ _ _ _ 21 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 22 levels level NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 pre pre X AFX _ _ _ _ SpaceAfter=No 25 -B -B PROPN NNP Number=Sing _ _ _ _ # sent_id = 6333 # text = (Hyon) and T (DND-41) cell lines as well as in freshly isolated normal human thymocytes. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 Hyon Hyon PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 T T PROPN NNP Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 DND Dnd NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 41 41 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 lines line NOUN NNS Number=Plur _ _ _ _ 13 as as ADV RB _ _ _ _ _ 14 well well ADV RB Degree=Pos _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 freshly freshly ADV RB _ _ _ _ _ 18 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 normal normal ADJ JJ Degree=Pos _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 6334 # text = The changes in the mRNA levels of these protooncogenes in Hyon cells were most pronounced at 42 and 43 degrees C; kinetic analysis demonstrated that the changes could be detected within 30 min of heat shock. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 changes change NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 9 protooncogenes protooncogene NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 Hyon Hyon PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 most most ADV RBS _ _ _ _ _ 15 pronounced pronounce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 at at ADP IN _ _ _ _ _ 17 42 42 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 43 43 NUM CD NumType=Card _ _ _ _ 20 degrees degree NOUN NNS Number=Plur _ _ _ _ 21 C care PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ; ; PUNCT , _ _ _ _ _ 23 kinetic kinetic ADJ JJ Degree=Pos _ _ _ _ 24 analysis analysis NOUN NN Number=Sing _ _ _ _ 25 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 changes change NOUN NNS Number=Plur _ _ _ _ 29 could could AUX MD VerbForm=Fin _ _ _ _ 30 be be AUX VB VerbForm=Inf _ _ _ _ 31 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 within within ADP IN _ _ _ _ _ 33 30 30 NUM CD NumType=Card _ _ _ _ 34 min min NOUN NNS Number=Plur _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 heat heat NOUN NN Number=Sing _ _ _ _ 37 shock shock NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 6335 # text = Altered transcription of c-fos and c-myc genes was the primary effect of heat shock. 1 Altered alter VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 fos fo NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 c- c- SYM NFP _ _ _ _ SpaceAfter=No 9 myc myc ADJ JJ Degree=Pos _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 primary primary ADJ JJ Degree=Pos _ _ _ _ 14 effect effect NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 heat heat NOUN NN Number=Sing _ _ _ _ 17 shock shock NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 6336 # text = Secondarily, heat shock of Hyon cells stabilized the c-myc mRNA level by increasing its half-life from 24 to 45 min. 1 Secondarily Secondarily ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 heat heat NOUN NN Number=Sing _ _ _ _ 4 shock shock NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 Hyon Hyon PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 stabilized stabilize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 c- c- SYM NFP _ _ _ _ SpaceAfter=No 11 myc myc ADJ JJ Degree=Pos _ _ _ _ 12 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 13 level level NOUN NN Number=Sing _ _ _ _ 14 by by SCONJ IN _ _ _ _ _ 15 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 16 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 17 half half NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 life life NOUN NN Number=Sing _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 24 24 NUM CD NumType=Card _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 45 45 NUM CD NumType=Card _ _ _ _ 24 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 6337 # text = The overall effect of heat shock on c-myc mRNA level, however, was a marked inhibition of its transcription. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 overall overall ADJ JJ Degree=Pos _ _ _ _ 3 effect effect NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 heat heat NOUN NN Number=Sing _ _ _ _ 6 shock shock NOUN NN Number=Sing _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 c- c- SYM NFP _ _ _ _ SpaceAfter=No 9 myc myc ADJ JJ Degree=Pos _ _ _ _ 10 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 11 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 however however ADV RB _ _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 6338 # text = These results demonstrate that the transcription of nuclear protooncogenes is regulated by heat shock indicating a role for nuclear protooncogenes in the stress response of lymphoid cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 protooncogenes protooncogene NOUN NNS Number=Plur _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 heat heat NOUN NN Number=Sing _ _ _ _ 14 shock shock NOUN NN Number=Sing _ _ _ _ 15 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 role role NOUN NN Number=Sing _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 protooncogenes protooncogene NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 stress stress NOUN NN Number=Sing _ _ _ _ 24 response response NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6339 # text = Document 003001663 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001663 003001663 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6340 # text = Blockade of T-cell activation by dithiocarbamates involves novel mechanisms of inhibition of nuclear factor of activated T cells. 1 Blockade Blockade NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 dithiocarbamates dithiocarbamate NOUN NNS Number=Plur _ _ _ _ 8 involves involf NOUN NNS Number=Plur _ _ _ _ 9 novel novel VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6341 # text = Dithiocarbamates (DTCs) have recently been reported as powerful inhibitors of NF-kappaB activation in a number of cell types. 1 Dithiocarbamates Dithiocarbamates PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 DTCs Dtcs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 recently recently ADV RB _ _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 powerful powerful ADJ JJ Degree=Pos _ _ _ _ 11 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 number number NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 6342 # text = Given the role of this transcription factor in the regulation of gene expression in the inflammatory response, NF-kappaB inhibitors have been suggested as potential therapeutic drugs for inflammatory diseases. 1 Given give VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 role role NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 regulation regulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 gene gene ADJ JJ Degree=Pos _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 17 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 22 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 23 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 25 suggested suggest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 as as ADP IN _ _ _ _ _ 27 potential potential ADJ JJ Degree=Pos _ _ _ _ 28 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 29 drugs drug NOUN NNS Number=Plur _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 32 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 6343 # text = We show here that DTCs inhibited both interleukin 2 (IL-2) synthesis and membrane expression of antigens which are induced during T-cell activation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 DTCs Dtcs PROPN NNP Number=Sing _ _ _ _ 6 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 both both DET DT _ _ _ _ _ 8 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 9 2 2 NUM CD NumType=Card _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 membrane membrane NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 antigens antigen NOUN NNS Number=Plur _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 during during ADP IN _ _ _ _ _ 25 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 6344 # text = This inhibition, which occurred with a parallel activation of c-Jun transactivating functions and expression, was reflected by transfection experiments at the IL-2 promoter level, and involved not only the inhibition of NF-kappaB-driven reporter activation but also that of nuclear factor of activated T cells (NFAT). 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 parallel parallel ADJ JJ Degree=Pos _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 Jun Jun PROPN NNP Number=Sing _ _ _ _ 14 transactivating transactivating VERB VBG VerbForm=Ger _ _ _ _ 15 functions function NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 reflected reflect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 transfection transfection NOUN NN Number=Sing _ _ _ _ 23 experiments experiment NOUN NNS Number=Plur _ _ _ _ 24 at at ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ _ 30 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 involved involved ADJ JJ Degree=Pos _ _ _ _ 34 not not ADV RB _ _ _ _ _ 35 only only ADV RB _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 reporter reporter NOUN NN Number=Sing _ _ _ _ 45 activation activation NOUN NN Number=Sing _ _ _ _ 46 but but CCONJ CC _ _ _ _ _ 47 also also ADV RB _ _ _ _ _ 48 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 49 of of ADP IN _ _ _ _ _ 50 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 51 factor factor NOUN NN Number=Sing _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 54 T t PROPN NNP Number=Sing _ _ _ _ 55 cells cell NOUN NNS Number=Plur _ _ _ _ 56 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 57 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 58 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 6345 # text = Accordingly, electrophoretic mobility shift assays (EMSAs) indicated that pyrrolidine DTC (PDTC) prevented NF-kappaB, and NFAT DNA-binding activity in T cells stimulated with either phorbol myristate acetate plus ionophore or antibodies against the CD3-T-cell receptor complex and simultaneously activated the binding of AP-1. 1 Accordingly accordingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 4 mobility mobility NOUN NN Number=Sing _ _ _ _ 5 shift shift NOUN NN Number=Sing _ _ _ _ 6 assays assay NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 EMSAs EMSAs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 pyrrolidine pyrrolidine PROPN NNP Number=Sing _ _ _ _ 13 DTC DTC PROPN NNP Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 PDTC PDTC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 24 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 binding bind VERB VBG VerbForm=Ger _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 T t PROPN NNP Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 either either DET DT _ _ _ _ _ 34 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 35 myristate myristate NOUN NN Number=Sing _ _ _ _ 36 acetate acetate NOUN NN Number=Sing _ _ _ _ 37 plus plus CCONJ CC _ _ _ _ _ 38 ionophore ionophore NOUN NN Number=Sing _ _ _ _ 39 or or CCONJ CC _ _ _ _ _ 40 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 41 against against ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 CD3-T Cd3-t NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 cell cell NOUN NN Number=Sing _ _ _ _ 46 receptor receptor NOUN NN Number=Sing _ _ _ _ 47 complex complex NOUN NN Number=Sing _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 simultaneously simultaneously ADV RB _ _ _ _ _ 50 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 binding binding NOUN NN Number=Sing _ _ _ _ 53 of of ADP IN _ _ _ _ _ 54 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 56 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 6346 # text = Furthermore, PDTC differentially targeted both NFATp and NFATc family members, inhibiting the transactivation functions of NFATp and mRNA induction of NFATc. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 PDTC PDTC PROPN NNP Number=Sing _ _ _ _ 4 differentially differentially ADV RB _ _ _ _ _ 5 targeted target VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 both both CCONJ CC _ _ _ _ _ 7 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 NFATc NFATc PROPN NNP Number=Sing _ _ _ _ 10 family family NOUN NN Number=Sing _ _ _ _ 11 members member NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 16 functions function NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 mRNA mRNA DET DT Definite=Ind|PronType=Art _ _ _ _ 21 induction induction NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 NFATc NFATc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 6347 # text = Strikingly, Western blotting and immunocytochemical experiments indicated that PDTC promoted a transient and rapid shuttling of NFATp and NFATc, leading to their accelerated export from the nucleus of activated T cells. 1 Strikingly strikingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Western western ADJ JJ Degree=Pos _ _ _ _ 4 blotting blotting NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 immunocytochemical immunocytochemical ADJ JJ Degree=Pos _ _ _ _ 7 experiments experiment NOUN NNS Number=Plur _ _ _ _ 8 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 PDTC PDTC PROPN NNP Number=Sing _ _ _ _ 11 promoted promote VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 transient transient ADJ JJ Degree=Pos _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 16 shuttling shuttling NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 NFATc NFATc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 leading lead VERB VBG VerbForm=Ger _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 25 accelerated accelerated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 export export NOUN NN Number=Sing _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 T t PROPN NNP Number=Sing _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 6348 # text = We propose that the activation of an NFAT kinase by PDTC could be responsible for the rapid shuttling of the NFAT, therefore transiently converting the sustained transactivation of this transcription factor that occurs during lymphocyte activation, and show that c-Jun NH2-terminal kinase (JNK) can act by directly phosphorylating NFATp. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 9 kinase kinase NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 PDTC Pdtc PROPN NNP Number=Sing _ _ _ _ 12 could could AUX MD VerbForm=Fin _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 18 shuttling shuttling NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 therefore therefore ADV RB _ _ _ _ _ 24 transiently transiently ADV RB _ _ _ _ _ 25 converting converte VERB VBG VerbForm=Ger _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 sustained sustain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ _ 32 factor factor NOUN NN Number=Sing _ _ _ _ 33 that that PRON WDT PronType=Rel _ _ _ _ 34 occurs occur VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 during during ADP IN _ _ _ _ _ 36 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 37 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 41 that that SCONJ IN _ _ _ _ _ 42 c- c- SYM NFP _ _ _ _ SpaceAfter=No 43 Jun Jun PROPN NNP Number=Sing _ _ _ _ 44 NH2 Nh2 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 terminal terminal NOUN NN Number=Sing _ _ _ _ 47 kinase kinase NOUN NN Number=Sing _ _ _ _ 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 JNK JNK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ _ 51 can can AUX MD VerbForm=Fin _ _ _ _ 52 act act VERB VB VerbForm=Inf _ _ _ _ 53 by by SCONJ IN _ _ _ _ _ 54 directly directly ADV RB _ _ _ _ _ 55 phosphorylating phosphorylat VERB VBG VerbForm=Ger _ _ _ _ 56 NFATp NFATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 6349 # text = In addition, the combined inhibitory effects on NFAT and NF-KB support a potential use of DTCs as immunosuppressants. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 7 effects effect NOUN NNS Number=Plur _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 KB KB PROPN NNP Number=Sing _ _ _ _ 14 support support NOUN NN Number=Sing _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 potential potential ADJ JJ Degree=Pos _ _ _ _ 17 use use NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 DTCs DTC NOUN NNS Number=Plur _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 immunosuppressants immunosuppressant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6350 # text = Document 003001666 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001666 003001666 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6351 # text = Activation of human macrophages by mechanical ventilation in vitro. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 mechanical mechanical ADJ JJ Degree=Pos _ _ _ _ 7 ventilation ventilation NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6352 # text = Positive-pressure mechanical ventilation supports gas exchange in patients with respiratory failure but is also responsible for significant lung injury. 1 Positive positive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 pressure pressure NOUN NN Number=Sing _ _ _ _ 4 mechanical mechanical ADJ JJ Degree=Pos _ _ _ _ 5 ventilation ventilation NOUN NN Number=Sing _ _ _ _ 6 supports support VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 gas gas NOUN NN Number=Sing _ _ _ _ 8 exchange exchange NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 patients patient NOUN NNS Number=Plur _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 respiratory respiratory NOUN NN Number=Sing _ _ _ _ 13 failure failure NOUN NN Number=Sing _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 also also ADV RB _ _ _ _ _ 17 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 significant significant ADJ JJ Degree=Pos _ _ _ _ 20 lung lung NOUN NN Number=Sing _ _ _ _ 21 injury injury NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 6353 # text = In this study, we have developed an in vitro model in which isolated lung cells can be submitted to a prolonged cyclic pressure-stretching strain resembling that of conventional mechanical ventilation. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 developed develop VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 11 model model NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 lung lung NOUN NN Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 can can AUX MD VerbForm=Fin _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 submitted submit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 prolonged prolonge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 cyclic cyclic NOUN NN Number=Sing _ _ _ _ 24 pressure pressure NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 stretching stretching VERB VBG VerbForm=Ger _ _ _ _ 27 strain strain NOUN NN Number=Sing _ _ _ _ 28 resembling resembl VERB VBG VerbForm=Ger _ _ _ _ 29 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 conventional conventional ADJ JJ Degree=Pos _ _ _ _ 32 mechanical mechanical ADJ JJ Degree=Pos _ _ _ _ 33 ventilation ventilation NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 6354 # text = In this model, cells cultured on a Silastic membrane were elongated up to 7% of their initial diameter, corresponding to a 12% increase in cell surface. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 model model NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 cultured culture VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 Silastic Silastic ADJ JJ Degree=Pos _ _ _ _ 10 membrane membrane NOUN NN Number=Sing _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 elongated elongate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 up up ADP RP _ _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 % % SYM NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 initial initial ADJ JJ Degree=Pos _ _ _ _ 20 diameter diameter NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 corresponding correspond VERB VBG VerbForm=Ger _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 % % SYM NN Number=Sing _ _ _ _ 27 increase increase NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 surface surface NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 6355 # text = The lung macrophage was identified as the main cellular source for critical inflammatory mediators such as tumor necrosis factor-alpha, the chemokines interleukin (IL)-8 and -6, and matrix metalloproteinase-9 in this model system of mechanical ventilation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 lung lung NOUN NN Number=Sing _ _ _ _ 3 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 as as ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 main main ADJ JJ Degree=Pos _ _ _ _ 9 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 10 source source NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 critical critical ADJ JJ Degree=Pos _ _ _ _ 13 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 14 mediators mediator NOUN NNS Number=Plur _ _ _ _ 15 such such ADJ JJ Degree=Pos _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 tumor tumor NOUN NN Number=Sing _ _ _ _ 18 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 alpha alpha INTJ UH _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 chemokines chemokine NOUN NNS Number=Plur _ _ _ _ 25 interleukin interleukin ADV RB _ _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 - - SYM SYM _ _ _ _ SpaceAfter=No 30 8 8 NUM CD NumType=Card _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 - - SYM SYM _ _ _ _ SpaceAfter=No 33 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 matrix matrix NUM CD NumType=Card _ _ _ _ 37 metalloproteinase metalloproteinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - SYM SYM _ _ _ _ SpaceAfter=No 39 9 9 NUM CD NumType=Card _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 42 model model NOUN NN Number=Sing _ _ _ _ 43 system system NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 mechanical mechanical ADJ JJ Degree=Pos _ _ _ _ 46 ventilation ventilation NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 6356 # text = These mediators were measured in supernatants from ventilated alveolar macrophages, monocyte-derived macrophages, and promonocytic THP-1 cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 mediators mediator NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 measured measure VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 supernatants supernatant NOUN NNS Number=Plur _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 ventilated ventilate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 alveolar alveolar NOUN NN Number=Sing _ _ _ _ 10 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 19 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 6357 # text = Nuclear factor-kappaB was found to be activated in ventilated macrophages. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 -kappaB -kappab NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 ventilated ventilate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 6358 # text = Synergistic proinflammatory effects of mechanical stress and molecules such as bacterial endotoxin were observed, suggesting that mechanical ventilation might be particularly deleterious in preinjured or infected lungs. 1 Synergistic Synergistic ADJ JJ Degree=Pos _ _ _ _ 2 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 3 effects effect NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 mechanical mechanical ADJ JJ Degree=Pos _ _ _ _ 6 stress stress NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 molecules molecule NOUN NNS Number=Plur _ _ _ _ 9 such such ADJ JJ Degree=Pos _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 12 endotoxin endotoxin NOUN NN Number=Sing _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 mechanical mechanical ADJ JJ Degree=Pos _ _ _ _ 19 ventilation ventilation NOUN NN Number=Sing _ _ _ _ 20 might might AUX MD VerbForm=Fin _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 particularly particularly ADV RB _ _ _ _ _ 23 deleterious deleterious ADJ JJ Degree=Pos _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 preinjured preinjure VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 lungs lung NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 6359 # text = Dexamethasone prevented IL-8 and tumor necrosis factor-alpha secretion in ventilated macrophages. 1 Dexamethasone Dexamethasone PROPN NNP Number=Sing _ _ _ _ 2 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 8 8 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 tumor tumor NOUN NN Number=Sing _ _ _ _ 8 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 -alpha -alpha NOUN NN Number=Sing _ _ _ _ 11 secretion secretion NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 ventilated ventilate ADJ JJ Degree=Pos _ _ _ _ 14 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 6360 # text = Mechanical ventilation induced low levels of IL-8 secretion by alveolar type II-like cells. 1 Mechanical Mechanical ADJ JJ Degree=Pos _ _ _ _ 2 ventilation ventilation NOUN NN Number=Sing _ _ _ _ 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 low low ADJ JJ Degree=Pos _ _ _ _ 5 levels level NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 8 8 NUM CD NumType=Card _ _ _ _ 10 secretion secretion NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 alveolar alveolar NOUN NN Number=Sing _ _ _ _ 13 type type NOUN NN Number=Sing _ _ _ _ 14 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 like like ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 6361 # text = Other lung cell types such as endothelial cells, bronchial cells, and fibroblasts failed to produce IL-8 in response to a prolonged cyclic pressure-stretching load. 1 Other other ADJ JJ Degree=Pos _ _ _ _ 2 lung lung NOUN NN Number=Sing _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 types type NOUN NNS Number=Plur _ _ _ _ 5 such such ADJ JJ Degree=Pos _ _ _ _ 6 as as ADP IN _ _ _ _ _ 7 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 bronchial bronchial ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 15 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 produce produce VERB VB VerbForm=Inf _ _ _ _ 18 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 8 8 NUM CD NumType=Card _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 response response NOUN NN Number=Sing _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 prolonged prolonge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 cyclic cyclic NOUN NN Number=Sing _ _ _ _ 27 pressure pressure NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 stretching stretching VERB VBG VerbForm=Ger _ _ _ _ 30 load load NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 6362 # text = This model is of particular value for exploring physical stress-induced signaling pathways, as well as for testing the effects of novel ventilatory strategies or adjunctive substances aimed at modulating cell activation induced by mechanical ventilation. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 model model NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 particular particular ADJ JJ Degree=Pos _ _ _ _ 6 value value NOUN NN Number=Sing _ _ _ _ 7 for for SCONJ IN _ _ _ _ _ 8 exploring explore VERB VBG VerbForm=Ger _ _ _ _ 9 physical physical ADJ JJ Degree=Pos _ _ _ _ 10 stress stress NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 -induced -induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 signaling signale VERB VBG VerbForm=Ger _ _ _ _ 13 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 as as ADV RB _ _ _ _ _ 16 well well ADV RB Degree=Pos _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 for for SCONJ IN _ _ _ _ _ 19 testing test VERB VBG VerbForm=Ger _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 effects effect NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 novel novel NOUN NN Number=Sing _ _ _ _ 24 ventilatory ventilatory NOUN NN Number=Sing _ _ _ _ 25 strategies strategy NOUN NNS Number=Plur _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 adjunctive adjunctive ADJ JJ Degree=Pos _ _ _ _ 28 substances substance NOUN NNS Number=Plur _ _ _ _ 29 aimed aim VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 at at SCONJ IN _ _ _ _ _ 31 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 activation activation NOUN NN Number=Sing _ _ _ _ 34 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 mechanical mechanical ADJ JJ Degree=Pos _ _ _ _ 37 ventilation ventilation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6363 # text = Document 003001669 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001669 003001669 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6364 # text = Murine and human T-lymphocyte GATA-3 factors mediate transcription through a cis-regulatory element within the human T-cell receptor delta gene enhancer. 1 Murine Murine PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 6 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 3 3 NUM CD NumType=Card _ _ _ _ 9 factors factor NOUN NNS Number=Plur _ _ _ _ 10 mediate mediate ADJ JJ Degree=Pos _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 through through ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 17 element element NOUN NN Number=Sing _ _ _ _ 18 within within ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 receptor receptor NOUN NN Number=Sing _ _ _ _ 24 delta delof ADP IN Abbr=Yes _ _ _ _ 25 gene gene ADJ JJ Degree=Pos _ _ _ _ 26 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6365 # text = A family of transcriptional activators has recently been identified in chickens; these transcriptional activators recognize a common consensus motif (WGATAR) through a conserved C4 zinc finger DNA-binding domain. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 family family NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 activators activator NOUN NNS Number=Plur _ _ _ _ 6 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 recently recently ADV RB _ _ _ _ _ 8 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 9 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 chickens chicken NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 ; ; PUNCT , _ _ _ _ _ 13 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 14 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 15 activators activator NOUN NNS Number=Plur _ _ _ _ 16 recognize recognize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 common common ADJ JJ Degree=Pos _ _ _ _ 19 consensus consensus NOUN NN Number=Sing _ _ _ _ 20 motif motif NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 WGATAR WGATAR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 through through ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 C4 c4 NOUN NN Number=Sing _ _ _ _ 28 zinc zinc NOUN NN Number=Sing _ _ _ _ 29 finger finger NOUN NN Number=Sing _ _ _ _ 30 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 binding binding VERB VBG VerbForm=Ger _ _ _ _ 33 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 6366 # text = One of the members of this multigene family, cGATA-3, is most abundantly expressed in the T-lymphocyte cell lineage. 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 members member NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 multigene multigene ADJ JJ Degree=Pos _ _ _ _ 8 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 cGATA cGATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 most most ADV RBS _ _ _ _ _ 16 abundantly abundantly ADV RB _ _ _ _ _ 17 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 6367 # text = Analysis of human and murine GATA-3 factors shows a striking degree of amino acid sequence identity and similar patterns of tissue specificity of expression in these three organisms. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 murine murine ADJ JJ Degree=Pos _ _ _ _ 6 GATA GATA NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 3 3 NUM CD NumType=Card _ _ _ _ 9 factors factor NOUN NNS Number=Plur _ _ _ _ 10 shows show VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 striking strike VERB VBG VerbForm=Ger _ _ _ _ 13 degree degree NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 amino amino DET DT _ _ _ _ _ 16 acid acid ADJ JJ Degree=Pos _ _ _ _ 17 sequence sequence NOUN NN Number=Sing _ _ _ _ 18 identity identity NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 similar similar ADJ JJ Degree=Pos _ _ _ _ 21 patterns pattern NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 tissue tissue NOUN NN Number=Sing _ _ _ _ 24 specificity specificity NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 29 three three NUM CD NumType=Card _ _ _ _ 30 organisms organism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 6368 # text = The murine and human factors are abundantly expressed in a variety of human and murine T-cell lines and can activate transcription through a tissue-specific GATA-binding site identified within the human T-cell receptor delta gene enhancer. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 murine murine NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 factors factor NOUN NNS Number=Plur _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 abundantly abundantly ADV RB _ _ _ _ _ 8 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 variety variety NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 murine murine ADJ JJ Degree=Pos _ _ _ _ 16 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 lines line NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 can can AUX MD VerbForm=Fin _ _ _ _ 21 activate activate VERB VB VerbForm=Inf _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 through through ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 tissue- tissue- SYM SYM _ _ _ _ SpaceAfter=No 26 specific specific ADJ JJ Degree=Pos _ _ _ _ 27 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 binding bind VERB VBG VerbForm=Ger _ _ _ _ 30 site site NOUN NN Number=Sing _ _ _ _ 31 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 within within ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 human human ADJ JJ Degree=Pos _ _ _ _ 35 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 cell cell NOUN NN Number=Sing _ _ _ _ 37 receptor receptor NOUN NN Number=Sing _ _ _ _ 38 delta delof ADP IN Abbr=Yes _ _ _ _ 39 gene gene ADJ JJ Degree=Pos _ _ _ _ 40 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 6369 # text = We infer that the murine and human GATA-3 proteins play a central and highly conserved role in vertebrate T-cell-specific transcriptional regulation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 infer infer VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 murine murine NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 3 3 NUM CD NumType=Card _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 play play VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 central central ADJ JJ Degree=Pos _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 highly highly ADV RB _ _ _ _ _ 17 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 role role NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 vertebrate vertebrate ADJ JJ Degree=Pos _ _ _ _ 21 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 26 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6370 # text = Document 003001671 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001671 003001671 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6371 # text = Transforming growth factor-beta suppresses human B lymphocyte 1 Transforming Transform VERB VBG VerbForm=Ger _ _ _ _ 2 growth growth NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 -beta -beta NOUN NN Number=Sing _ _ _ _ 5 suppresses suppress VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ # sent_id = 6372 # text = Ig production by inhibiting synthesis and the switch from the membrane form to the secreted form of 1 Ig ig ADJ JJ Degree=Pos _ _ _ _ 2 production production NOUN NN Number=Sing _ _ _ _ 3 by by SCONJ IN _ _ _ _ _ 4 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 5 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 switch switch NOUN NN Number=Sing _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 membrane membrane NOUN NN Number=Sing _ _ _ _ 12 form form NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 secreted secret VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 form form NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ # sent_id = 6373 # text = Ig mRNA. 1 Ig ig PROPN NNP Number=Sing _ _ _ _ 2 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6374 # text = Transforming growth factor-beta (TGF-beta) inhibits B cell 1 Transforming Transform VERB VBG VerbForm=Ger _ _ _ _ 2 growth growth NOUN NN Number=Sing _ _ _ _ 3 factor-beta factor-beta NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 TGF- Tgf- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 B b ADJ JJ Degree=Pos _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ # sent_id = 6375 # text = Ig secretion and reduces B cell membrane Ig expression. 1 Ig ig ADJ JJ Degree=Pos _ _ _ _ 2 secretion secretion NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 reduces reduce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 B b ADJ JJ Degree=Pos _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 membrane membrane NOUN NN Number=Sing _ _ _ _ 8 Ig ig NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 6376 # text = The addition of TGF-beta to human B lymphocyte cultures stimulated with Staphylococcus aureus Cowan strain I and IL-2 completely inhibited B cell Ig secretion (greater than 90%) and decreased B cell surface IgM, IgD, kappa 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 beta beta NOUN NN Number=Sing _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 11 cultures culture NOUN NNS Number=Plur _ _ _ _ 12 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 Staphylococcus Staphylococcus PROPN NNP Number=Sing _ _ _ _ 15 aureus aureus ADP IN _ _ _ _ _ 16 Cowan Cowan PROPN NNP Number=Sing _ _ _ _ 17 strain strain NOUN NN Number=Sing _ _ _ _ 18 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 completely completely ADV RB _ _ _ _ _ 24 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 B b ADJ JJ Degree=Pos _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 Ig ig NOUN NN Number=Sing _ _ _ _ 28 secretion secretion NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 greater greater ADJ JJR Degree=Cmp _ _ _ _ 31 than than ADP IN _ _ _ _ _ 32 90 90 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 B b ADJ JJ Degree=Pos _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 surface surface NOUN NN Number=Sing _ _ _ _ 40 IgM IgM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 IgD IgD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 kappa kappa PROPN NNP Number=Sing _ _ _ _ # sent_id = 6377 # text = L chain, and lambda L chain expression. 1 L l ADJ JJ Degree=Pos _ _ _ _ 2 chain chain NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 lambda lambda PROPN NNP Number=Sing _ _ _ _ 6 L L PROPN NNP Number=Sing _ _ _ _ 7 chain chain NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 6378 # text = In contrast, TGF-beta had only minimal effects on two other B cell membrane proteins, HLA-DR and CD20. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 TGF Tgf NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 beta beta NOUN NN Number=Sing _ _ _ _ 7 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 only only ADV RB _ _ _ _ _ 9 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 10 effects effect NOUN NNS Number=Plur _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 two two NUM CD NumType=Card _ _ _ _ 13 other other ADJ JJ Degree=Pos _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 membrane membrane NOUN NN Number=Sing _ _ _ _ 17 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 DR dr PROPN NNP Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 CD20 CD20 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 6379 # text = Internal labeling with [35S]methionine and immunoprecipitation with anti-IgM, anti-kappa, and anti-lambda antibodies revealed a striking reduction in kappa 1 Internal Internal ADJ JJ Degree=Pos _ _ _ _ 2 labeling labeling NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 35S 35S PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 7 methionine methionine NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 immunoprecipitation immunoprecipitation NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 anti anti X AFX _ _ _ _ SpaceAfter=No 12 -IgM -Igm NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 anti-kappa anti-kappa NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 anti-lambda anti-lambda ADJ JJ Degree=Pos _ _ _ _ 18 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 19 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 striking strik VERB VBG VerbForm=Ger _ _ _ _ 22 reduction reduction NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ # sent_id = 6380 # text = L chain in the presence of TGF-beta. 1 L l ADJ JJ Degree=Pos _ _ _ _ 2 chain chain NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 presence presence NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 6381 # text = A less pronounced reduction in lambda 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 less less ADJ JJ Degree=Pos _ _ _ _ 3 pronounced pronounce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 reduction reduction NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 lambda lambda NOUN NN Number=Sing _ _ _ _ # sent_id = 6382 # text = L chain and microH chain was also noted. 1 L l ADJ JJ Degree=Pos _ _ _ _ 2 chain chain NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 microH microh DET DT _ _ _ _ _ 5 chain chain NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 noted note VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 6383 # text = Northern blot analysis of RNA purified from B cells treated with TGF-beta for varying time intervals revealed a significant decrease in steady state kappa and lambda 1 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 RNA RNA PROPN NNP Number=Sing _ _ _ _ 6 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 B b ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 TGF TGF NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 beta beta NOUN NN Number=Sing _ _ _ _ 15 for for SCONJ IN _ _ _ _ _ 16 varying varying VERB VBG VerbForm=Ger _ _ _ _ 17 time time NOUN NN Number=Sing _ _ _ _ 18 intervals interval NOUN NNS Number=Plur _ _ _ _ 19 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 significant significant ADJ JJ Degree=Pos _ _ _ _ 22 decrease decrease NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 steady steady ADJ JJ Degree=Pos _ _ _ _ 25 state state NOUN NN Number=Sing _ _ _ _ 26 kappa kappa NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 lambda lambda NOUN NN Number=Sing _ _ _ _ # sent_id = 6384 # text = L chain mRNA levels. 1 L l ADJ JJ Degree=Pos _ _ _ _ 2 chain chain NOUN NN Number=Sing _ _ _ _ 3 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 4 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 . . PUNCT . _ _ _ _ _ # sent_id = 6385 # text = Furthermore, a significant decrease in the switch from the membrane forms of mu and gamma to their respective secreted forms was noted in the presence of TGF-beta. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 significant significant ADJ JJ Degree=Pos _ _ _ _ 5 decrease decrease NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 switch switch NOUN NN Number=Sing _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 membrane membrane NOUN NN Number=Sing _ _ _ _ 12 forms form NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 mu mu NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 gamma gamma NOUN NN Number=Sing _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 respective respective ADJ JJ Degree=Pos _ _ _ _ 20 secreted secret ADJ JJ Degree=Pos _ _ _ _ 21 forms form NOUN NNS Number=Plur _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 noted note VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 presence presence NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 6386 # text = Nuclear run-on experiments demonstrated decreased transcription of kappa L chain. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 run run VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 on on ADP IN _ _ _ _ _ 5 experiments experiment NOUN NNS Number=Plur _ _ _ _ 6 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 L L PROPN NNP Number=Sing _ _ _ _ 12 chain chain NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 6387 # text = The effects of TGF-beta on two transcriptional regulatory factors, Oct-2 and nuclear factor (NF) kappa B, known to be important in Ig gene transcription were examined. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 beta beta NOUN NN Number=Sing _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 two two NUM CD NumType=Card _ _ _ _ 9 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 10 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 kappa kappa PROPN NNP Number=Sing _ _ _ _ 23 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 be be AUX VB VerbForm=Inf _ _ _ _ 28 important important ADJ JJ Degree=Pos _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 Ig ig PROPN NNP Number=Sing _ _ _ _ 31 gene gene PROPN NNP Number=Sing _ _ _ _ 32 transcription transcription NOUN NN Number=Sing _ _ _ _ 33 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 6388 # text = Oct-2 mRNA levels and both Oct-2 and NF-kappa B proteins in nuclear extracts were not altered by treatment with TGF-beta. 1 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 5 levels level NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 both both CCONJ CC _ _ _ _ _ 8 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 proteins protein NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 extracts extract NOUN NNS Number=Plur _ _ _ _ 20 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 altered alter VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 treatment treatment NOUN NN Number=Sing _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 6389 # text = In contrast, levels of the transcriptional factor AP-1, which is not known to be important in B cell 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 levels level NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 important important ADJ JJ Degree=Pos _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 B b PROPN NNP Number=Sing _ _ _ _ 22 cell cell PROPN NNP Number=Sing _ _ _ _ # sent_id = 6390 # text = Ig production, were reduced by TGF-beta. 1 Ig ig ADJ JJ Degree=Pos _ _ _ _ 2 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 6391 # text = These findings demonstrate that TGF-beta decreases B lymphocyte 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 TGF Tgf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 beta beta X GW _ _ _ _ _ 8 decreases decrease X GW _ _ _ _ _ 9 B benefit X GW _ _ _ _ _ 10 lymphocyte lymphocyte X ADD _ _ _ _ _ # sent_id = 6392 # text = Ig secretion by inhibiting the synthesis of Ig mRNA and inhibiting the switch from the membrane form to the secreted forms of mu and gamma mRNA. 1 Ig ig ADJ JJ Degree=Pos _ _ _ _ 2 secretion secretion NOUN NN Number=Sing _ _ _ _ 3 by by SCONJ IN _ _ _ _ _ 4 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Ig ig PROPN NNP Number=Sing _ _ _ _ 9 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 switch switch NOUN NN Number=Sing _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 membrane membrane NOUN NN Number=Sing _ _ _ _ 17 form form NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 secreted secret VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 forms form NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 mu mu NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 gamma gamma PROPN NNP Number=Sing _ _ _ _ 26 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 6393 # text = The mechanism by which TGF-beta inhibits 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 TGF TGF NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 beta beta NOUN NN Number=Sing _ _ _ _ 8 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ # sent_id = 6394 # text = Ig chain synthesis is unclear although it does not involve inhibition of the binding of NF-kappa B or Oct-2 to their respective target sequences. 1 Ig ig ADJ JJ Degree=Pos _ _ _ _ 2 chain chain NOUN NN Number=Sing _ _ _ _ 3 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 unclear unclear ADJ JJ Degree=Pos _ _ _ _ 6 although although SCONJ IN _ _ _ _ _ 7 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 8 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 involve involve VERB VB VerbForm=Inf _ _ _ _ 11 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 binding binding NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B B PROPN NNP Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 26 respective respective ADJ JJ Degree=Pos _ _ _ _ 27 target target NOUN NN Number=Sing _ _ _ _ 28 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6395 # text = Document 003001673 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001673 003001673 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6396 # text = Temporal control of IgH gene expression in developing B cells by the 3' locus control region. 1 Temporal Temporal ADJ JJ Degree=Pos _ _ _ _ 2 control control NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 IgH Igh DET DT _ _ _ _ _ 5 gene gene ADJ JJ Degree=Pos _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 in in SCONJ IN _ _ _ _ _ 8 developing develop VERB VBG VerbForm=Ger _ _ _ _ 9 B b ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ' ' PUNCT `` _ _ _ _ _ 15 locus locus NOUN NN Number=Sing _ _ _ _ 16 control control NOUN NN Number=Sing _ _ _ _ 17 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6397 # text = The suggested roles of the downstream 3' regions acting as a Locus Control Region (LCR), have allowed comparisons to be made between the regulation of the IgH locus with other model systems whose gene expression is governed by LCR activity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 suggested suggest VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 roles role NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 7 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ' ' PUNCT '' _ _ _ _ _ 9 regions region NOUN NNS Number=Plur _ _ _ _ 10 acting act VERB VBG VerbForm=Ger _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 Locus Locus PROPN NNP Number=Sing _ _ _ _ 14 Control Control PROPN NNP Number=Sing _ _ _ _ 15 Region region PROPN NNP Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 LCR LCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 allowed allow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 comparisons comparison NOUN NNS Number=Plur _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 be be AUX VB VerbForm=Inf _ _ _ _ 25 made make VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 between between ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 regulation regulation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 IgH Igh PROPN NNP Number=Sing _ _ _ _ 32 locus locus NOUN NN Number=Sing _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 other other ADJ JJ Degree=Pos _ _ _ _ 35 model model NOUN NN Number=Sing _ _ _ _ 36 systems system NOUN NNS Number=Plur _ _ _ _ 37 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 38 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 expression expression NOUN NN Number=Sing _ _ _ _ 40 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 41 governed govern VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 42 by by ADP IN _ _ _ _ _ 43 LCR Lcr ADJ JJR Degree=Cmp _ _ _ _ 44 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 6398 # text = Here we summarize the importance of the IgH 3'LCR and its putative functional role in IgH gene expression and compare it with the 5'LCR regulatory region of the human beta-globin locus. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 summarize summarize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 importance importance NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 IgH IgH PROPN NNP Number=Sing _ _ _ _ 9 3' 3's PART POS _ _ _ _ SpaceAfter=No 10 LCR LCR PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 putative putative ADJ JJ Degree=Pos _ _ _ _ 14 functional functional ADJ JJ Degree=Pos _ _ _ _ 15 role role NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 IgH Igh ADJ JJ Degree=Pos _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 compare compare VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 it it PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 5' 5' NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 LCR Lcr ADP IN _ _ _ _ _ 27 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 28 region region NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 human human ADJ JJ Degree=Pos _ _ _ _ 32 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 globin globin NOUN NN Number=Sing _ _ _ _ 35 locus locus NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6399 # text = Document 003001683 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001683 003001683 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6400 # text = ERP, a new member of the ets transcription factor/oncoprotein family: cloning, characterization, and differential expression during B-lymphocyte development. 1 ERP Erp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 new new ADJ JJ Degree=Pos _ _ _ _ 5 member member NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 ets et NOUN NNS Number=Plur _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 /oncoprotein /oncoprotein NOUN NN Number=Sing _ _ _ _ 12 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 : : PUNCT : _ _ _ _ _ 14 cloning cloning NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 characterization characterization NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 differential differential ADJ JJ Degree=Pos _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 during during ADP IN _ _ _ _ _ 22 B B ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 25 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6401 # text = The ets gene family encodes a group of proteins which function as transcription factors under physiological conditions and, if aberrantly expressed, can cause cellular transformation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ets et NOUN NNS Number=Plur _ _ _ _ 3 gene gene ADJ JJ Degree=Pos _ _ _ _ 4 family family NOUN NN Number=Sing _ _ _ _ 5 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 group group NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 which which PRON WDT PronType=Rel _ _ _ _ 11 function function VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factors factor NOUN NNS Number=Plur _ _ _ _ 15 under under ADP IN _ _ _ _ _ 16 physiological physiological ADJ JJ Degree=Pos _ _ _ _ 17 conditions condition NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 if if SCONJ IN _ _ _ _ _ 21 aberrantly aberrantly ADV RB _ _ _ _ _ 22 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 can can AUX MD VerbForm=Fin _ _ _ _ 25 cause cause VERB VB VerbForm=Inf _ _ _ _ 26 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 27 transformation transformation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 6402 # text = We have recently identified two regulatory elements in the murine immunoglobulin heavy-chain (IgH) enhancer, pi and microB, which exhibit striking similarity to binding sites for ets-related proteins. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 recently recently ADV RB _ _ _ _ _ 4 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 two two NUM CD NumType=Card _ _ _ _ 6 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 7 elements element NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 murine murine NOUN NN Number=Sing _ _ _ _ 11 immunoglobulin immunoglobulin ADP IN _ _ _ _ _ 12 heavy heavy ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 chain chain NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 IgH IgH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 pi pi NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 microB microb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 exhibit exhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 striking strik VERB VBG VerbForm=Ger _ _ _ _ 27 similarity similarity NOUN NN Number=Sing _ _ _ _ 28 to to SCONJ IN _ _ _ _ _ 29 binding bind VERB VBG VerbForm=Ger _ _ _ _ 30 sites site NOUN NNS Number=Plur _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 ets et NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 related relate ADJ JJ Degree=Pos _ _ _ _ 35 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 6403 # text = To identify ets-related transcriptional regulators expressed in pre-B lymphocytes that may interact with either the pi or the microB site, we have used a PCR approach with degenerate oligonucleotides encoding conserved sequences in all members of the ets family. 1 To to ADP IN _ _ _ _ _ 2 identify identify ADJ JJ Degree=Pos _ _ _ _ 3 ets et NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 - - PUNCT : _ _ _ _ SpaceAfter=No 5 related related ADJ JJ Degree=Pos _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 regulators regulator NOUN NNS Number=Plur _ _ _ _ 8 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 pre pre X AFX _ _ _ _ SpaceAfter=No 11 -B -b ADJ JJ Degree=Pos _ _ _ _ 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 interact interact VERB VB VerbForm=Inf _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 either either CCONJ CC _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 pi pi NOUN NN Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 microB microb PROPN NNP Number=Sing _ _ _ _ 23 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 26 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 PCR Pcr NOUN NN Number=Sing _ _ _ _ 30 approach approach NOUN NN Number=Sing _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 degenerate degenerate NOUN NN Number=Sing _ _ _ _ 33 oligonucleotides oligonucleotides NOUN NNS Number=Plur _ _ _ _ 34 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 35 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 sequences sequence NOUN NNS Number=Plur _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 all all DET DT _ _ _ _ _ 39 members member NOUN NNS Number=Plur _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 ets et NOUN NNS Number=Plur _ _ _ _ 43 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 6404 # text = We have cloned the gene for a new ets-related transcription factor, ERP (ets-related protein), from the murine pre-B cell line BASC 6C2 and from mouse lung tissue. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 new new ADJ JJ Degree=Pos _ _ _ _ 9 ets et NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 related related ADJ JJ Degree=Pos _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 ERP ERP PROPN NNP Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 ets et NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 related related ADJ JJ Degree=Pos _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 murine murine NOUN NN Number=Sing _ _ _ _ 26 pre pre X AFX _ _ _ _ SpaceAfter=No 27 -B -b ADJ JJ Degree=Pos _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 line line NOUN NN Number=Sing _ _ _ _ 30 BASC Basc NOUN NN Number=Sing _ _ _ _ 31 6C2 6c2 NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 from from ADP IN _ _ _ _ _ 34 mouse mouse NOUN NN Number=Sing _ _ _ _ 35 lung lung NOUN NN Number=Sing _ _ _ _ 36 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 6405 # text = The ERP protein contains a region of high homology with the ETS DNA-binding domain common to all members of the ets transcription factor/oncoprotein family. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ERP ERP PROPN NNP Number=Sing _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 region region NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 high high ADJ JJ Degree=Pos _ _ _ _ 9 homology homology NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 ETS ets NOUN NN Number=Sing _ _ _ _ 13 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 binding binding VERB VBG VerbForm=Ger _ _ _ _ 16 domain domain NOUN NN Number=Sing _ _ _ _ 17 common common ADJ JJ Degree=Pos _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 all all DET DT _ _ _ _ _ 20 members member NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 ets et NOUN NNS Number=Plur _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 / / PUNCT , _ _ _ _ SpaceAfter=No 27 oncoprotein oncoprotein ADJ JJ Degree=Pos _ _ _ _ 28 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 6406 # text = Three additional smaller regions show homology to the ELK-1 and SAP-1 genes, a subgroup of the ets gene family that interacts with the serum response factor. 1 Three Three NUM CD NumType=Card _ _ _ _ 2 additional additional ADJ JJ Degree=Pos _ _ _ _ 3 smaller smaller ADJ JJR Degree=Cmp _ _ _ _ 4 regions region NOUN NNS Number=Plur _ _ _ _ 5 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 homology homology NOUN NN Number=Sing _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 ELK elk PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 SAP sap NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 subgroup subgroup NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 ets et NOUN NNS Number=Plur _ _ _ _ 23 gene gene ADJ JJ Degree=Pos _ _ _ _ 24 family family NOUN NN Number=Sing _ _ _ _ 25 that that PRON WDT PronType=Rel _ _ _ _ 26 interacts interact VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 serum serum NOUN NN Number=Sing _ _ _ _ 30 response response NOUN NN Number=Sing _ _ _ _ 31 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 6407 # text = Full-length ERP expresses only negligible DNA-binding activity by itself. 1 Full full ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 length length NOUN NN Number=Sing _ _ _ _ 4 ERP Erp NOUN NN Number=Sing _ _ _ _ 5 expresses express NOUN NNS Number=Plur _ _ _ _ 6 only only ADV RB _ _ _ _ _ 7 negligible negligible ADJ JJ Degree=Pos _ _ _ _ 8 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 binding bind VERB VBG VerbForm=Ger _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 itself itself PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs|Reflex=Yes _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 6408 # text = Removal of the carboxy terminus enables ERP to interact with a variety of ets-binding sites including the E74 site, the IgH enhancer pi site, and the lck promoter ets site, suggesting a carboxy-terminal negative regulatory domain. 1 Removal removal NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 carboxy carboxy NOUN NN Number=Sing _ _ _ _ 5 terminus terminus NOUN NN Number=Sing _ _ _ _ 6 enables enable VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 ERP ERP PROPN NNP Number=Sing _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 interact interact VERB VB VerbForm=Inf _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 variety variety NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 ets et NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 sites site NOUN NNS Number=Plur _ _ _ _ 18 including include VERB VBG VerbForm=Ger _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 E74 E74 PROPN NNP Number=Sing _ _ _ _ 21 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 IgH Igh ADJ JJ Degree=Pos _ _ _ _ 25 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 26 pi pi NOUN NN Number=Sing _ _ _ _ 27 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 lck lck NOUN NN Number=Sing _ _ _ _ 32 promoter promoter NOUN NN Number=Sing _ _ _ _ 33 ets et NOUN NNS Number=Plur _ _ _ _ 34 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 37 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 carboxy carboxy NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 41 negative negative ADJ JJ Degree=Pos _ _ _ _ 42 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 43 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 6409 # text = At least three ERP-related transcripts are expressed in a variety of tissues. 1 At at ADV RB _ _ _ _ _ 2 least least ADV RBS Degree=Sup _ _ _ _ 3 three three NUM CD NumType=Card _ _ _ _ 4 ERP- ERP- SYM NFP _ _ _ _ SpaceAfter=No 5 related related ADJ JJ Degree=Pos _ _ _ _ 6 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 variety variety NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 6410 # text = However, within the B-cell lineage, ERP is highly expressed primarily at early stages of B-lymphocyte development, and expression declines drastically upon B-cell maturation, correlating with the enhancer activity of the IgH pi site. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 within within ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 ERP ERP PROPN NNP Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 highly highly ADV RB _ _ _ _ _ 13 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 primarily primarily ADV RB _ _ _ _ _ 15 at at ADP IN _ _ _ _ _ 16 early early ADJ JJ Degree=Pos _ _ _ _ 17 stages stage NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 22 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 declines decline NOUN NNS Number=Plur _ _ _ _ 27 drastically drastically ADV RB _ _ _ _ _ 28 upon upon ADP IN _ _ _ _ _ 29 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 maturation maturation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 correlating correlat VERB VBG VerbForm=Ger _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 38 activity activity NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 IgH IgH PROPN NNP Number=Sing _ _ _ _ 42 pi pi NOUN NN Number=Sing _ _ _ _ 43 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 6411 # text = These data suggest that ERP might play a role in B-cell development and in IgH gene regulation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 ERP Erp PROPN NNP Number=Sing _ _ _ _ 6 might might AUX MD VerbForm=Fin _ _ _ _ 7 play play VERB VB VerbForm=Inf _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 role role NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 B b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 development development NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 IgH Igh DET DT _ _ _ _ _ 18 gene gene ADJ JJ Degree=Pos _ _ _ _ 19 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6412 # text = Document 003001685 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001685 003001685 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6413 # text = Inhibitory effect of growth hormone on TNF-alpha secretion and nuclear factor-kappaB translocation in lipopolysaccharide-stimulated human monocytes. 1 Inhibitory Inhibitory ADJ JJ Degree=Pos _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 growth growth NOUN NN Number=Sing _ _ _ _ 5 hormone hormone NOUN NN Number=Sing _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 alpha alpha NOUN NN Number=Sing _ _ _ _ 10 secretion secretion NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappab NOUN NN Number=Sing _ _ _ _ 16 translocation translocation NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6414 # text = Several studies have pointed to a link between immune and endocrine systems, including a regulatory function of GH on monocyte activation. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 pointed point VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 link link NOUN NN Number=Sing _ _ _ _ 8 between between ADP IN _ _ _ _ _ 9 immune immune NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 endocrine endocrine NOUN NN Number=Sing _ _ _ _ 12 systems system NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 including include VERB VBG VerbForm=Ger _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 17 function function NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 GH GH PROPN NNP Number=Sing _ _ _ _ 20 on on ADP IN _ _ _ _ _ 21 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 6415 # text = The present study demonstrates that human THP-1 promonocytic cells, engineered by gene transfer to constitutively produce human growth hormone (hGH), secreted depressed amounts of TNF-alpha in response to challenge by LPS. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 engineered engineer VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 gene gene ADJ JJ Degree=Pos _ _ _ _ 16 transfer transfer NOUN NN Number=Sing _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 constitutively constitutively ADV RB _ _ _ _ _ 19 produce produce VERB VB VerbForm=Inf _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 growth growth NOUN NN Number=Sing _ _ _ _ 22 hormone hormone NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 hGH hGh INTJ UH _ _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 secreted secret VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 depressed depress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 amounts amount NOUN NNS Number=Plur _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 alpha alpha NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 response response NOUN NN Number=Sing _ _ _ _ 36 to to PART TO _ _ _ _ _ 37 challenge challenge VERB VB VerbForm=Inf _ _ _ _ 38 by by ADP IN _ _ _ _ _ 39 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 6416 # text = The effect of GH appears to occur in an autocrine fashion, since the inhibitory effect on TNF-alpha secretion by constitutive GH production could be abolished in the presence of anti-hGH mAb. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 GH GH PROPN NNP Number=Sing _ _ _ _ 5 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 occur occur VERB VB VerbForm=Inf _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 autocrine autocrine ADJ JJ Degree=Pos _ _ _ _ 11 fashion fashion NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 since since SCONJ IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 16 effect effect NOUN NN Number=Sing _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 alpha alpha NOUN NN Number=Sing _ _ _ _ 21 secretion secretion NOUN NN Number=Sing _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 24 GH Gh NOUN NN Number=Sing _ _ _ _ 25 production production NOUN NN Number=Sing _ _ _ _ 26 could could AUX MD VerbForm=Fin _ _ _ _ 27 be be AUX VB VerbForm=Inf _ _ _ _ 28 abolished abolish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 presence presence NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 anti-hGH anti-hgh DET DT _ _ _ _ _ 34 mAb mAb NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 6417 # text = The GH-induced inhibitory effect was also observed using normal human monocytes and monocyte-derived macrophages. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 GH Gh ADJ JJ Degree=Pos|NumType=Ord _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 6 effect effect NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 also also ADV RB _ _ _ _ _ 9 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 using use VERB VBG VerbForm=Ger _ _ _ _ 11 normal normal ADJ JJ Degree=Pos _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 6418 # text = Inhibition of TNF-alpha production by THP-1-hGH-transfected cells cultured in the presence of LPS is dependent on a selective pathway, since no inhibition of TNF-alpha production was observed when cells were cultured in the presence of PMA. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 alpha alpha NOUN NN Number=Sing _ _ _ _ 6 production production NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 THP THP NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 hGH hGh NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 cultured culture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 presence presence NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 LPS LPS PROPN NNP Number=Sing _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 selective selective ADJ JJ Degree=Pos _ _ _ _ 27 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 since since SCONJ IN _ _ _ _ _ 30 no no DET DT _ _ _ _ _ 31 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 alpha alpha NOUN NN Number=Sing _ _ _ _ 36 production production NOUN NN Number=Sing _ _ _ _ 37 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 38 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 when when ADV WRB PronType=Int _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ _ 41 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 42 cultured culture VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 presence presence NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 6419 # text = Inhibition of TNF-alpha secretion by LPS-stimulated THP-1-hGH cells was associated with a decrease in nuclear translocation of nuclear factor-kappaB. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 alpha alpha NOUN NN Number=Sing _ _ _ _ 6 secretion secretion NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 hGH hgh NOUN NN Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 decrease decrease NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 24 translocation translocation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappaB kappaB NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 6420 # text = The capacity of GH to inhibit LPS-induced TNF-alpha production by monocytes without altering other pathways leading to TNF-alpha production may be of potential relevance in septic shock, since GH is available for clinical use. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 capacity capacity NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 GH GH PROPN NNP Number=Sing _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 7 LPS Lps ADV RB _ _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 alpha alpha NOUN NN Number=Sing _ _ _ _ 13 production production NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 16 without without SCONJ IN _ _ _ _ _ 17 altering alter VERB VBG VerbForm=Ger _ _ _ _ 18 other other ADJ JJ Degree=Pos _ _ _ _ 19 pathways pathway NOUN NNS Number=Plur _ _ _ _ 20 leading lead VERB VBG VerbForm=Ger _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 alpha alpha NOUN NN Number=Sing _ _ _ _ 25 production production NOUN NN Number=Sing _ _ _ _ 26 may may AUX MD VerbForm=Fin _ _ _ _ 27 be be AUX VB VerbForm=Inf _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 potential potential ADJ JJ Degree=Pos _ _ _ _ 30 relevance relevance NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 septic septic ADJ JJ Degree=Pos _ _ _ _ 33 shock shock NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 since since SCONJ IN _ _ _ _ _ 36 GH GH PROPN NNP Number=Sing _ _ _ _ 37 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 available available ADJ JJ Degree=Pos _ _ _ _ 39 for for ADP IN _ _ _ _ _ 40 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 41 use use NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6421 # text = Document 003001691 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001691 003001691 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6422 # text = Transcriptional regulation of interleukin 3 (IL3) in primary human T lymphocytes. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 5 3 3 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 IL3 IL3 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 primary primary ADJ JJ Degree=Pos _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 T t NOUN NN Number=Sing _ _ _ _ 13 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 6423 # text = Role of AP-1- and octamer-binding proteins in control of IL3 gene expression. 1 Role role NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 binding binding VERB VBG VerbForm=Ger _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 control control NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 IL3 IL3 NUM CD NumType=Card _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6424 # text = We have investigated the molecular and biochemical basis for activation of interleukin 3 (IL3) gene expression in primary human T lymphocytes following CD3 and CD2 receptor stimulation or activation by phytohemagglutinin plus phorbol 12-myristate 13-acetate. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 8 basis basis NOUN NN Number=Sing _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 13 3 3 NUM CD NumType=Card _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 IL3 IL3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 primary primary ADJ JJ Degree=Pos _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 T t NOUN NN Number=Sing _ _ _ _ 23 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 24 following follow VERB VBG VerbForm=Ger _ _ _ _ 25 CD3 CD3 NUM CD NumType=Card _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 CD2 CD2 NUM CD NumType=Card _ _ _ _ 28 receptor receptor NOUN NN Number=Sing _ _ _ _ 29 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 activation activation NOUN NN Number=Sing _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 phytohemagglutinin phytohemagglutinin NOUN NN Number=Sing _ _ _ _ 34 plus plus CCONJ CC _ _ _ _ _ 35 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 36 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 - - PUNCT : _ _ _ _ SpaceAfter=No 38 myristate myristate NOUN NN Number=Sing _ _ _ _ 39 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 6425 # text = Using transfection and reporter gene assays specifically designed for primary T lymphocytes in conjunction with gel retardation assays, Western blot analyses and UV cross-linking studies, we found that c-Jun, c-Fos, and octamer-binding proteins play a major role in transcriptional activation of the IL3 gene via their interaction with two specific regions contained within the IL3 5'-flanking sequence. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 transfection transfection NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 reporter reporter NOUN NN Number=Sing _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 assays assays NOUN NNS Number=Plur _ _ _ _ 7 specifically specifically ADV RB _ _ _ _ _ 8 designed design VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 primary primary ADJ JJ Degree=Pos _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 conjunction conjunction NOUN NN Number=Sing _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 gel gel NOUN NN Number=Sing _ _ _ _ 17 retardation retardation NOUN NN Number=Sing _ _ _ _ 18 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 Western western ADJ JJ Degree=Pos _ _ _ _ 21 blot blot NOUN NN Number=Sing _ _ _ _ 22 analyses analyse NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 UV UV NOUN NN Number=Sing _ _ _ _ 25 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 27 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 30 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 that that SCONJ IN _ _ _ _ _ 32 c- c- SYM NFP _ _ _ _ SpaceAfter=No 33 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 c- c- SYM NFP _ _ _ _ SpaceAfter=No 36 Fos Fos PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 binding bind VERB VBG VerbForm=Ger _ _ _ _ 42 proteins protein NOUN NNS Number=Plur _ _ _ _ 43 play play VERB VB VerbForm=Inf _ _ _ _ 44 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 45 major major ADJ JJ Degree=Pos _ _ _ _ 46 role role NOUN NN Number=Sing _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 49 activation activation NOUN NN Number=Sing _ _ _ _ 50 of of ADP IN _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 IL3 IL3 NOUN NN Number=Sing _ _ _ _ 53 gene gene NOUN NN Number=Sing _ _ _ _ 54 via via ADP IN _ _ _ _ _ 55 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 56 interaction interaction NOUN NN Number=Sing _ _ _ _ 57 with with ADP IN _ _ _ _ _ 58 two two NUM CD NumType=Card _ _ _ _ 59 specific specific ADJ JJ Degree=Pos _ _ _ _ 60 regions region NOUN NNS Number=Plur _ _ _ _ 61 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 62 within within ADP IN _ _ _ _ _ 63 the the DET DT Definite=Def|PronType=Art _ _ _ _ 64 IL3 IL3 NOUN NN Number=Sing _ _ _ _ 65 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 66 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 67 - - PUNCT , _ _ _ _ SpaceAfter=No 68 flanking flanking VERB VBG VerbForm=Ger _ _ _ _ 69 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 70 . . PUNCT . _ _ _ _ _ # sent_id = 6426 # text = Additionally, the region between bases -107 and -59 of the IL3 promoter containing putative AP-2 and Sp1 binding motifs appears necessary for basal level expression of the IL3 gene. 1 Additionally additionally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 region region NOUN NN Number=Sing _ _ _ _ 5 between between ADP IN _ _ _ _ _ 6 bases bas NOUN NNS Number=Plur _ _ _ _ 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 107 107 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 - - SYM SYM _ _ _ _ SpaceAfter=No 11 59 59 NUM CD NumType=Card _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 IL3 IL3 NOUN NN Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 containing contain VERB VBG VerbForm=Ger _ _ _ _ 17 putative putative ADJ JJ Degree=Pos _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 23 binding binding VERB VBG VerbForm=Ger _ _ _ _ 24 motifs motif NOUN NNS Number=Plur _ _ _ _ 25 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 basal basal ADJ JJ Degree=Pos _ _ _ _ 29 level level NOUN NN Number=Sing _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 IL3 IL3 NUM CD NumType=Card _ _ _ _ 34 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 6427 # text = The data also indicate that CD2 receptor activation and phytohemagglutinin plus phorbol 12-myristate 13-acetate stimulation augment T cell IL3 gene expression through the same cis- and trans-activating signals. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 CD2 Cd2 NUM CD NumType=Card _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 phytohemagglutinin phytohemagglutinin NOUN NN Number=Sing _ _ _ _ 11 plus plus CCONJ CC _ _ _ _ _ 12 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 13 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 myristate myristate NOUN NN Number=Sing _ _ _ _ 16 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 acetate acetate NOUN NN Number=Sing _ _ _ _ 19 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 20 augment augment NOUN NN Number=Sing _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 IL3 IL3 NUM CD NumType=Card _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 through through ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 same same ADJ JJ Degree=Pos _ _ _ _ 29 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 activating activat VERB VBG VerbForm=Ger _ _ _ _ 35 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 6428 # text = These results should contribute to a better understanding of the regulation of IL3 gene expression in human T lymphocytes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 should should AUX MD VerbForm=Fin _ _ _ _ 4 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 better better ADJ JJR Degree=Cmp _ _ _ _ 8 understanding understanding NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 regulation regulation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 IL3 IL3 NUM CD NumType=Card _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6429 # text = Document 003001706 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001706 003001706 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6430 # text = Tcf-1-mediated transcription in T lymphocytes: differential role for glycogen synthase kinase-3 in fibroblasts and T cells. 1 Tcf Tcf NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 : : PUNCT : _ _ _ _ _ 11 differential differential ADJ JJ Degree=Pos _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 glycogen glycogen ADJ JJ Degree=Pos _ _ _ _ 15 synthase synthase NOUN NN Number=Sing _ _ _ _ 16 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 3 3 NUM CD NumType=Card _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6431 # text = Beta-catenin is the vertebrate homolog of the Drosophila segment polarity gene Armadillo and plays roles in both cell-cell adhesion and transduction of the Wnt signaling cascade. 1 Beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 catenin catenin NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 vertebrate vertebrate ADJ JJ Degree=Pos _ _ _ _ 7 homolog homolog NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 Drosophila Drosophila PROPN NNP Number=Sing _ _ _ _ 11 segment segment NOUN NN Number=Sing _ _ _ _ 12 polarity polarity NOUN NN Number=Sing _ _ _ _ 13 gene gene PROPN NNP Number=Sing _ _ _ _ 14 Armadillo Armadillo PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 roles role NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 both both DET DT _ _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 transduction transduction NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 Wnt Wnt PROPN NNP Number=Sing _ _ _ _ 29 signaling signaling NOUN NN Number=Sing _ _ _ _ 30 cascade cascade NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 6432 # text = Recently, members of the Lef/Tcf transcription factor family have been identified as protein partners of beta-catenin, explaining how beta-catenin alters gene expression. 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 members member NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 Lef Lef PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 Tcf Tcf PROPN NNP Number=Sing _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 family family NOUN NN Number=Sing _ _ _ _ 12 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 14 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 partners partner NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 beta- beta- SYM NFP _ _ _ _ SpaceAfter=No 20 catenin catenin NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 explaining explain VERB VBG VerbForm=Ger _ _ _ _ 23 how how ADV WRB PronType=Int _ _ _ _ 24 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 catenin catenin NOUN NN Number=Sing _ _ _ _ 27 alters alter NOUN NNS Number=Plur _ _ _ _ 28 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 6433 # text = Here we report that in T cells, Tcf-1 also becomes transcriptionally active through interaction with beta-catenin, suggesting that the Wnt signal transduction pathway is operational in T lymphocytes as well. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 Tcf Tcf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - SYM SYM _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 also also ADV RB _ _ _ _ _ 13 becomes become VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 transcriptionally transcriptionally ADV RB _ _ _ _ _ 15 active active ADJ JJ Degree=Pos _ _ _ _ 16 through through ADP IN _ _ _ _ _ 17 interaction interaction NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 catenin catenin NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 Wnt Wnt ADJ JJ Degree=Pos _ _ _ _ 27 signal signal NOUN NN Number=Sing _ _ _ _ 28 transduction transduction NOUN NN Number=Sing _ _ _ _ 29 pathway pathway NOUN NN Number=Sing _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 operational operational ADJ JJ Degree=Pos _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 T t PROPN NNP Number=Sing _ _ _ _ 34 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 35 as as ADV RB _ _ _ _ _ 36 well well ADV RB Degree=Pos _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 6434 # text = However, although Wnt signals are known to inhibit the activity of the negative regulatory protein kinase glycogen synthase kinase-3beta (GSK-3beta), resulting in increased levels of beta-catenin, we find no evidence for involvement of GSK-3beta in Tcf-mediated transcription in T cells. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 although although SCONJ IN _ _ _ _ _ 4 Wnt Wnt ADJ JJ Degree=Pos _ _ _ _ 5 signals signal NOUN NNS Number=Plur _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 negative negative ADJ JJ Degree=Pos _ _ _ _ 15 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 kinase kinase NOUN NN Number=Sing _ _ _ _ 18 glycogen glycogen NOUN NN Number=Sing _ _ _ _ 19 synthase synthase NOUN NN Number=Sing _ _ _ _ 20 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 beta beta NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 GSK Gsk NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 resulting result VERB VBG VerbForm=Ger _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 levels level NOUN NNS Number=Plur _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 beta- beta- SYM NFP _ _ _ _ SpaceAfter=No 37 catenin catenin NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 40 find find VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 41 no no DET DT _ _ _ _ _ 42 evidence evidence NOUN NN Number=Sing _ _ _ _ 43 for for ADP IN _ _ _ _ _ 44 involvement involvement NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 GSK GSK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 49 beta beta NOUN NN Number=Sing _ _ _ _ 50 in in ADP IN _ _ _ _ _ 51 Tcf Tcf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 54 transcription transcription NOUN NN Number=Sing _ _ _ _ 55 in in ADP IN _ _ _ _ _ 56 T t PROPN NNP Number=Sing _ _ _ _ 57 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 6435 # text = That is, a dominant negative GSK-3beta does not specifically activate 1 That that PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 6 negative negative ADJ JJ Degree=Pos _ _ _ _ 7 GSK Gsk NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 beta beta NOUN NN Number=Sing _ _ _ _ 11 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 specifically specifically ADV RB _ _ _ _ _ 14 activate activate VERB VB VerbForm=Inf _ _ _ _ # sent_id = 6436 # text = Tcf transcription and stimuli (lithium or phytohemagglutinin) that inhibit GSK-3beta activity also do not activate 1 Tcf Tcf NOUN NN Number=Sing _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 lithium lithium NOUN NN Number=Sing _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 phytohemagglutinin phytohemagglutinin NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 inhibit inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 GSK GSK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 beta beta NOUN NN Number=Sing _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 also also ADV RB _ _ _ _ _ 18 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 activate activate VERB VB VerbForm=Inf _ _ _ _ # sent_id = 6437 # text = Tcf reporter genes. 1 Tcf Tcf ADJ JJ Degree=Pos _ _ _ _ 2 reporter reporter NOUN NN Number=Sing _ _ _ _ 3 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ _ # sent_id = 6438 # text = Thus, inhibition of GSK-3beta is insufficient to activate Tcf-dependent transcription in T lymphocytes. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 GSK GSK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 beta beta NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 insufficient insufficient ADJ JJ Degree=Pos _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 activate activate VERB VB VerbForm=Inf _ _ _ _ 13 Tcf Tcf ADV RB _ _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 6439 # text = In contrast, in C57MG fibroblast cells, lithium inactivates GSK-3beta and induces Tcf-controlled transcription. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 C57MG C57MG ADJ JJ Degree=Pos _ _ _ _ 6 fibroblast fibroblast ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 lithium lithium NOUN NN Number=Sing _ _ _ _ 10 inactivates inactivate NOUN NNS Number=Plur _ _ _ _ 11 GSK GSK NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 beta beta NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 induces induce NOUN NNS Number=Plur _ _ _ _ 17 Tcf- Tcf- PUNCT : _ _ _ _ SpaceAfter=No 18 controlled control VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 6440 # text = This is the first demonstration that lithium can alter gene expression of Tcf-responsive genes, and points to a difference in regulation of Wnt signaling between fibroblasts and lymphocytes. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 5 demonstration demonstration NOUN NN Number=Sing _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 lithium lithium NOUN NN Number=Sing _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 alter alter ADV RB _ _ _ _ _ 10 gene gene VERB VB VerbForm=Inf _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Tcf Tcf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 16 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 points point NOUN NNS Number=Plur _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 difference difference NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 regulation regulation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 Wnt Wnt ADJ JJ Degree=Pos _ _ _ _ 27 signaling signaling NOUN NN Number=Sing _ _ _ _ 28 between between ADP IN _ _ _ _ _ 29 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6441 # text = Document 003001712 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001712 003001712 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6442 # text = Identification of a novel factor that interacts with an immunoglobulin heavy-chain promoter and stimulates transcription in conjunction with the lymphoid cell-specific factor OTF2. 1 Identification identification NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 novel novel NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 interacts interact VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 11 heavy heavy ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 chain chain NOUN NN Number=Sing _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 conjunction conjunction NOUN NN Number=Sing _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 specific specific ADJ JJ Degree=Pos _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ _ 27 OTF2 Otf2 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6443 # text = The tissue-specific expression of the MOPC 141 immunoglobulin heavy-chain gene was studied by using in vitro transcription. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 MOPC Mopc PROPN NNPS Number=Plur _ _ _ _ 9 141 141 NUM CD NumType=Card _ _ _ _ 10 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 11 heavy heavy ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 chain chain NOUN NN Number=Sing _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by SCONJ IN _ _ _ _ _ 18 using use VERB VBG VerbForm=Ger _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 vitro vitro NOUN NN Number=Sing _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 6444 # text = B-cell-specific transcription of this gene was dependent on the octamer element 5'-ATGCAAAG-3', located in the upstream region of this promoter and in the promoters of all other immunoglobulin heavy- and light-chain genes. 1 B- B- SYM NFP _ _ _ _ SpaceAfter=No 2 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 octamer octamer NOUN NN Number=Sing _ _ _ _ 14 element element NOUN NN Number=Sing _ _ _ _ 15 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 ATGCAAAG ATGCAAAG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 27 region region NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 30 promoter promoter NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 promoters promoter NOUN NNS Number=Plur _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 all all DET DT _ _ _ _ _ 37 other other ADJ JJ Degree=Pos _ _ _ _ 38 immunoglobulin immunoglobulin ADP IN _ _ _ _ _ 39 heavy heavy ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 light light NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 chain chain NOUN NN Number=Sing _ _ _ _ 45 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 6445 # text = The interaction of purified octamer transcription factors 1 and 2 (OTF1 and OTF2) with the MOPC 141 promoter was studied by using electrophoretic mobility shift assays and DNase I footprinting. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 interaction interaction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 octamer octamer NOUN NN Number=Sing _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factors factor NOUN NNS Number=Plur _ _ _ _ 8 1 1 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 2 2 NUM CD NumType=Card _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 OTF1 Otf1 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 OTF2 Otf2 X LS _ _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 MOPC Mopc NOUN NN Number=Sing _ _ _ _ 19 141 141 NUM CD NumType=Card _ _ _ _ 20 promoter promoter NOUN NN Number=Sing _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by SCONJ IN _ _ _ _ _ 24 using use VERB VBG VerbForm=Ger _ _ _ _ 25 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 26 mobility mobility NOUN NN Number=Sing _ _ _ _ 27 shift shift NOUN NN Number=Sing _ _ _ _ 28 assays assay NOUN NNS Number=Plur _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 DNase DNase NOUN NN Number=Sing _ _ _ _ 31 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 32 footprinting footprint VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 6446 # text = Purified OTF1 from HeLa cells and OTF1 and OTF2 from B cells bound to identical sequences within the heavy-chain promoter. 1 Purified Purify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 OTF1 OTF1 PROPN NNP Number=Sing _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 OTF1 OTF1 NUM CD NumType=Card _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 OTF2 OTF2 NUM CD NumType=Card _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 B b ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 bound bound ADJ JJ Degree=Pos _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 identical identical ADJ JJ Degree=Pos _ _ _ _ 16 sequences sequence NOUN NNS Number=Plur _ _ _ _ 17 within within ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 heavy heavy ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 chain chain NOUN NN Number=Sing _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 6447 # text = The OTF interactions we observed extended over the heptamer element 5'-CTCAGGA-3', and it seems likely that the binding of the purified factors involves cooperation between octamer and heptamer sites in this promoter. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 OTF OTF ADJ JJ Degree=Pos _ _ _ _ 3 interactions interaction NOUN NNS Number=Plur _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 extended extend VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 over over ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 heptamer heptamer NOUN NN Number=Sing _ _ _ _ 10 element element NOUN NN Number=Sing _ _ _ _ 11 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 '- '- PUNCT . _ _ _ _ SpaceAfter=No 13 CTCAGGA CTCAGGa NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 20 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 likely likely ADJ JJ Degree=Pos _ _ _ _ 22 that that SCONJ IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 binding binding NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 purified purified ADJ JJ Degree=Pos _ _ _ _ 28 factors factor NOUN NNS Number=Plur _ _ _ _ 29 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 cooperation cooperation NOUN NN Number=Sing _ _ _ _ 31 between between ADP IN _ _ _ _ _ 32 octamer octamer NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 heptamer heptamer NOUN NN Number=Sing _ _ _ _ 35 sites site NOUN NNS Number=Plur _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 38 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 6448 # text = In addition to these elements, we identified a second regulatory element, the N element with the sequence 5'-GGAACCTCCCCC-3'. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 8 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 11 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 N N PROPN NNP Number=Sing _ _ _ _ 16 element element NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 sequence sequence NOUN NN Number=Sing _ _ _ _ 20 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 22 -GGAACCTCCCCC -ggaacctccccc NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 6449 # text = The N element could independently mediate low levels of transcription in both B-cell and HeLa-cell extracts, and, in conjunction with the octamer element, it can promote high levels of transcription in B-cell extracts. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 N n PROPN NNP Number=Sing _ _ _ _ 3 element element NOUN NN Number=Sing _ _ _ _ 4 could could AUX MD VerbForm=Fin _ _ _ _ 5 independently independently ADV RB _ _ _ _ _ 6 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 7 low low ADJ JJ Degree=Pos _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 both both DET DT _ _ _ _ _ 13 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 HeLa HeLa NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 conjunction conjunction NOUN NN Number=Sing _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 octamer octamer NOUN NN Number=Sing _ _ _ _ 28 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 31 can can AUX MD VerbForm=Fin _ _ _ _ 32 promote promote VERB VB VerbForm=Inf _ _ _ _ 33 high high ADJ JJ Degree=Pos _ _ _ _ 34 levels level NOUN NNS Number=Plur _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 transcription transcription NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 B b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 6450 # text = The N element bound a transcription factor, NTF, that is ubiquitous in cell-type distribution, and NTF was distinct from any of the previously described proteins that bind to similar sequences. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 N N PROPN NNP Number=Sing _ _ _ _ 3 element element NOUN NN Number=Sing _ _ _ _ 4 bound bound ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 NTF NTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 type type NOUN NN Number=Sing _ _ _ _ 18 distribution distribution NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 NTF NTF PROPN NNP Number=Sing _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 any any DET DT _ _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 previously previously ADV RB _ _ _ _ _ 29 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 proteins protein NOUN NNS Number=Plur _ _ _ _ 31 that that PRON WDT PronType=Rel _ _ _ _ 32 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 similar similar ADJ JJ Degree=Pos _ _ _ _ 35 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 6451 # text = Based on these results, we propose that NTF and OTF2 interactions (both with their cognate DNA elements and possibly at the protein-protein level) may be critical to B-cell-specific expression and that these interactions provide additional pathways for regulating gene expression. 1 Based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 on on ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 NTF NTF PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 OTF2 OTF2 NUM CD NumType=Card _ _ _ _ 12 interactions interaction NOUN NNS Number=Plur _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 both both CCONJ CC _ _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 17 cognate cognate ADJ JJ Degree=Pos _ _ _ _ 18 DNA dna NOUN NN Number=Sing _ _ _ _ 19 elements element NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 possibly possibly ADV RB _ _ _ _ _ 22 at at ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 25 protein protein NOUN NN Number=Sing _ _ _ _ 26 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 may may AUX MD VerbForm=Fin _ _ _ _ 29 be be AUX VB VerbForm=Inf _ _ _ _ 30 critical critical ADJ JJ Degree=Pos _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 B- B- X GW _ _ _ _ SpaceAfter=No 33 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 specific specific ADJ JJ Degree=Pos _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 that that SCONJ IN _ _ _ _ _ 39 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 40 interactions interaction NOUN NNS Number=Plur _ _ _ _ 41 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 42 additional additional ADJ JJ Degree=Pos _ _ _ _ 43 pathways pathway NOUN NNS Number=Plur _ _ _ _ 44 for for SCONJ IN _ _ _ _ _ 45 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 46 gene gene ADJ JJ Degree=Pos _ _ _ _ 47 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6452 # text = Document 003001713 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001713 003001713 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6453 # text = Fibroblast growth factor-1 (FGF-1) enhances IL-2 production and nuclear translocation of NF-kappaB in FGF receptor-bearing Jurkat T cells. 1 Fibroblast Fibroblast ADJ JJ Degree=Pos _ _ _ _ 2 growth growth NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 -1 -1 NUM CD NumType=Card _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 FGF FGF NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 enhances enhance NOUN NNS Number=Plur _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 production production NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 translocation translocation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 FGF FGF PROPN NNP Number=Sing _ _ _ _ 24 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 bearing bear VERB VBG VerbForm=Ger _ _ _ _ 27 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 28 T T PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6454 # text = Fibroblast growth factors (FGFs) are heparin-binding proteins crucial to embryogenesis, angiogenesis, and wound healing. 1 Fibroblast Fibroblast ADJ JJ Degree=Pos _ _ _ _ 2 growth growth NOUN NN Number=Sing _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 FGFs FGF NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 heparin heparin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 binding bind VERB VBG VerbForm=Ger _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 embryogenesis embryogenesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 angiogenesis angiogenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 wound wound ADJ JJ Degree=Pos _ _ _ _ 20 healing healing NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 6455 # text = FGF-1 is abundantly expressed in the synovium in rheumatoid arthritis and in rejecting allografts, sites of chronic immune-mediated inflammation. 1 FGF Fgf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 abundantly abundantly ADV RB _ _ _ _ _ 6 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 synovium synovium NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 rheumatoid rheumatoid ADJ JJ Degree=Pos _ _ _ _ 12 arthritis arthritis NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 rejecting reject VERB VBG VerbForm=Ger _ _ _ _ 16 allografts allograft NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 sites site NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 21 immune-mediated immune-mediated ADJ JJ Degree=Pos _ _ _ _ 22 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 6456 # text = The frequency of FGF-1-responsive T cells is increased in the peripheral blood of these disorders, and a high percentage of infiltrating T cells in rheumatoid arthritis synovium express receptors for FGF-1. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 frequency frequency NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 FGF FGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 16 blood blood NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 19 disorders disorder NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 high high ADJ JJ Degree=Pos _ _ _ _ 24 percentage percentage NOUN NN Number=Sing _ _ _ _ 25 of of SCONJ IN _ _ _ _ _ 26 infiltrating infiltrat VERB VBG VerbForm=Ger _ _ _ _ 27 T t PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 rheumatoid rheumatoid ADJ JJ Degree=Pos _ _ _ _ 31 arthritis arthritis NOUN NN Number=Sing _ _ _ _ 32 synovium synovium NOUN NN Number=Sing _ _ _ _ 33 express express ADJ JJ Degree=Pos _ _ _ _ 34 receptors receptor NOUN NNS Number=Plur _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 FGF FGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 6457 # text = To understand the action of FGF-1 in T cells, studies were initiated in Jurkat T cells that express the signaling isoform of FGF receptor-1. 1 To to PART TO _ _ _ _ _ 2 understand understand VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 action action NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 FGF FGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 studies study NOUN NNS Number=Plur _ _ _ _ 14 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 initiated initiate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 signaling signaling NOUN NN Number=Sing _ _ _ _ 24 isoform isoform NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 FGF FGF PROPN NNP Number=Sing _ _ _ _ 27 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 6458 # text = These experiments show that FGF-1 stimulation of Jurkat T cells provides a second signal that augments TCR-mediated IL-2 production. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 experiments experiment NOUN NNS Number=Plur _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 FGF FGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 11 T T PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 16 signal signal NOUN NN Number=Sing _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 augments augment VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 TCR Tcr ADV RB _ _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 6459 # text = Analogous to costimulation via CD28, this activity is mediated through activation of Rel/kappaB, a family of transcription factors known to regulate IL-2 and other activation-inducible proteins. 1 Analogous Analogous ADP IN _ _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 4 via via ADP IN _ _ _ _ _ 5 CD28 CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 through through ADP IN _ _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 family family NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ _ 23 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 26 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 other other ADJ JJ Degree=Pos _ _ _ _ 31 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 34 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 6460 # text = FGF-1 alone induces modest nuclear translocation of kappaB-binding proteins, and this translocation is enhanced by the combination of anti-CD3 and FGF-1. 1 FGF Fgf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 alone alone ADJ JJ Degree=Pos _ _ _ _ 5 induces induce NOUN NNS Number=Plur _ _ _ _ 6 modest modest ADJ JJ Degree=Pos _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 translocation translocation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 binding bind VERB VBG VerbForm=Ger _ _ _ _ 13 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 17 translocation translocation NOUN NN Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 combination combination NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 FGF FGF NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 6461 # text = This NF-kappaB binding complex is composed of transcriptionally active p65(RelA)/p50 heterodimers and results primarily from the targeted degradation of IkappaB-alpha, an inhibitor that sequesters Rel/kappaB in the cytoplasm. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 5 binding binding VERB VBG VerbForm=Ger _ _ _ _ 6 complex complex NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 transcriptionally transcriptionally ADV RB _ _ _ _ _ 11 active active ADJ JJ Degree=Pos _ _ _ _ 12 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 RelA RelA NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 / / PUNCT , _ _ _ _ SpaceAfter=No 17 p50 p50 NUM CD NumType=Card _ _ _ _ 18 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 results result NOUN NNS Number=Plur _ _ _ _ 21 primarily primarily ADV RB _ _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 targeted target VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 degradation degradation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 33 that that PRON WDT PronType=Rel _ _ _ _ 34 sequesters sequester VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 / / PUNCT , _ _ _ _ SpaceAfter=No 37 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 6462 # text = These data are the first to show a connection between FGF-1 signaling and NF-kappaB activation outside of embryonic development. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 show show VERB VB VerbForm=Inf _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 connection connection NOUN NN Number=Sing _ _ _ _ 10 between between ADP IN _ _ _ _ _ 11 FGF FGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 signaling signaling NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 outside outside ADP IN _ _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 embryonic embryonic ADJ JJ Degree=Pos _ _ _ _ 23 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 6463 # text = The signaling events that link FGF receptor-1 engagement and NF-kappaB activation in Jurkat are probably distinct from the CD28 costimulation pathway, since FGF-1-induced Rel/kappaB binding proteins do not contain significant levels of c-Rel and are not identical with the CD28 response complex. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 signaling signaling NOUN NN Number=Sing _ _ _ _ 3 events event NOUN NNS Number=Plur _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 link link VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 FGF Fgf ADJ JJ Degree=Pos _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 engagement engagement NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 probably probably ADV RB _ _ _ _ _ 20 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 24 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 25 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 since since ADP IN _ _ _ _ _ 28 FGF FGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 Rel/ Rel/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 kappaB kappab NOUN NN Number=Sing _ _ _ _ 35 binding binding VERB VBG VerbForm=Ger _ _ _ _ 36 proteins protein NOUN NNS Number=Plur _ _ _ _ 37 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 38 not not PART RB _ _ _ _ _ 39 contain contain VERB VB VerbForm=Inf _ _ _ _ 40 significant significant ADJ JJ Degree=Pos _ _ _ _ 41 levels level NOUN NNS Number=Plur _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 Rel Rel NOUN NN Number=Sing _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 48 not not PART RB _ _ _ _ _ 49 identical identical ADJ JJ Degree=Pos _ _ _ _ 50 with with ADP IN _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 CD28 Cd28 NOUN NN Number=Sing _ _ _ _ 53 response response NOUN NN Number=Sing _ _ _ _ 54 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6464 # text = Document 003001718 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001718 003001718 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6465 # text = Activation of NF-kappa B by interleukin 2 in human blood monocytes. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 interleukin interleukin ADJ JJ Degree=Pos _ _ _ _ 9 2 2 NUM CD NumType=Card _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 blood blood NOUN NN Number=Sing _ _ _ _ 13 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6466 # text = We report here that interleukin 2 (IL-2) acts on human blood monocytes by enhancing binding activity of the transcription factor NF-kappa B to its consensus sequence in the 5' regulatory enhancer region of the IL-2 receptor alpha chain (p55). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 interleukin interleukin ADJ JJ Degree=Pos _ _ _ _ 6 2 2 NUM CD NumType=Card _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 acts act NOUN NNS Number=Plur _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 blood blood NOUN NN Number=Sing _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 17 by by SCONJ IN _ _ _ _ _ 18 enhancing enhance VERB VBG VerbForm=Ger _ _ _ _ 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 31 consensus consensus NOUN NN Number=Sing _ _ _ _ 32 sequence sequence NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ' 's PUNCT `` _ _ _ _ _ 37 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 38 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 39 region region NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 2 2 NUM CD NumType=Card _ _ _ _ 45 receptor receptor NOUN NN Number=Sing _ _ _ _ 46 alpha alpha NOUN NN Number=Sing _ _ _ _ 47 chain chain NOUN NN Number=Sing _ _ _ _ 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 p55 p55 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 6467 # text = Similarly, IL-2 activates NF-kappa B in the human monocytic cell line U 937, but not in resting human T-cells. 1 Similarly similarly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 activates activate NOUN NNS Number=Plur _ _ _ _ 7 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 line line NOUN NN Number=Sing _ _ _ _ 17 U U PROPN NNP Number=Sing _ _ _ _ 18 937 937 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 not not ADV RB _ _ _ _ _ 22 in in SCONJ IN _ _ _ _ _ 23 resting rest VERB VBG VerbForm=Ger _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 6468 # text = This effect is detectable within 15 min and peaks 1 h after exposure to IL-2. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 5 within within ADP IN _ _ _ _ _ 6 15 15 NUM CD NumType=Card _ _ _ _ 7 min min NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 peaks peak NOUN NNS Number=Plur _ _ _ _ 10 1 1 NUM CD NumType=Card _ _ _ _ 11 h h NOUN NN Number=Sing _ _ _ _ 12 after after ADP IN _ _ _ _ _ 13 exposure exposure NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 6469 # text = Enhanced NF-kappa B binding activity is followed by functional activation in that inducibility of the IL-2 receptor alpha chain is mediated by enhanced NF-kappa B binding and that a heterologous promoter containing the NF-kappa B consensus sequence (-291 to -245) of the IL-2 receptor alpha chain gene is activated. 1 Enhanced enhance PROPN NNP Number=Sing _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 binding binde VERB VBG VerbForm=Ger _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 followed follow VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 functional functional ADJ JJ Degree=Pos _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 15 inducibility inducibility NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ _ 22 alpha alpha NOUN NN Number=Sing _ _ _ _ 23 chain chain NOUN NN Number=Sing _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappa kappa NOUN NN Number=Sing _ _ _ _ 31 B b NOUN NN Number=Sing _ _ _ _ 32 binding bind VERB VBG VerbForm=Ger _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 that that PRON WDT PronType=Dem _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 37 promoter promoter NOUN NN Number=Sing _ _ _ _ 38 containing contain VERB VBG VerbForm=Ger _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 kappa kappa NOUN NN Number=Sing _ _ _ _ 43 B b NOUN NN Number=Sing _ _ _ _ 44 consensus consensus NOUN NN Number=Sing _ _ _ _ 45 sequence sequence NOUN NN Number=Sing _ _ _ _ 46 (- (- PUNCT . _ _ _ _ SpaceAfter=No 47 291 291 NUM CD NumType=Card _ _ _ _ 48 to to ADP IN _ _ _ _ _ 49 - - SYM SYM _ _ _ _ SpaceAfter=No 50 245 245 NUM CD NumType=Card _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 the the DET DT Definite=Def|PronType=Art _ _ _ _ 54 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 55 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 56 2 2 NUM CD NumType=Card _ _ _ _ 57 receptor receptor NOUN NN Number=Sing _ _ _ _ 58 alpha alpha NOUN NN Number=Sing _ _ _ _ 59 chain chain NOUN NN Number=Sing _ _ _ _ 60 gene gene NOUN NN Number=Sing _ _ _ _ 61 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 62 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 63 . . PUNCT . _ _ _ _ _ # sent_id = 6470 # text = In addition, IL-2 is capable of increasing transcript levels of the p50 gene coding for the p50 subunit of the NF-kappa B transcription factor, whereas mRNA levels of the p65 NF-kappa B gene remained unchanged. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 capable capable ADJ JJ Degree=Pos _ _ _ _ 9 of of SCONJ IN _ _ _ _ _ 10 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 11 transcript transcript ADJ JJ Degree=Pos _ _ _ _ 12 levels level NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 p50 p50 NOUN NN Number=Sing _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 coding code VERB VBG VerbForm=Ger _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 p50 p50 NOUN NN Number=Sing _ _ _ _ 21 subunit subunit NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa NOUN NN Number=Sing _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 whereas whereas SCONJ IN _ _ _ _ _ 32 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 33 levels level NOUN NNS Number=Plur _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 p65 p65 NOUN NN Number=Sing _ _ _ _ 37 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 kappa kappa PROPN NNP Number=Sing _ _ _ _ 40 B b PROPN NNP Number=Sing _ _ _ _ 41 gene gene PROPN NNP Number=Sing _ _ _ _ 42 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 43 unchanged unchang ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6471 # text = Document 003001723 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001723 003001723 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6472 # text = A transcriptional regulatory element is associated with a nuclease-hypersensitive site in the pol gene of human immunodeficiency virus type 1. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 3 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 4 element element NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 nuclease nuclease NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 pol pol NOUN NN Number=Sing _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 20 virus virus NOUN NN Number=Sing _ _ _ _ 21 type type NOUN NN Number=Sing _ _ _ _ 22 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6473 # text = Analysis of the chromatin organization of the integrated human immunodeficiency virus type 1 (HIV-1) genome has previously revealed a major constitutive DNase I-hypersensitive site associated with the pol gene (E. Verdin, J. Virol. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 5 organization organization NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 integrated integrate ADJ JJ Degree=Pos _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 11 virus virus NOUN NN Number=Sing _ _ _ _ 12 type type NOUN NN Number=Sing _ _ _ _ 13 1 1 NUM CD NumType=Card _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 genome genome NOUN NN Number=Sing _ _ _ _ 20 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 previously previously ADV RB _ _ _ _ _ 22 revealed reveale VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 major major ADJ JJ Degree=Pos _ _ _ _ 25 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 26 DNase DNase NOUN NN Number=Sing _ _ _ _ 27 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 30 site site NOUN NN Number=Sing _ _ _ _ 31 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 pol pol NOUN NN Number=Sing _ _ _ _ 35 gene gene NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 E. e. PROPN NNP Number=Sing _ _ _ _ 38 Verdin Verdin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 J. J. PROPN NNP Number=Sing _ _ _ _ 41 Virol Virol PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 6474 # text = 65:6790-6799, 1991). 1 65:6790-6799 65:6790-6799 NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 1991 1991 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 5 . . PUNCT . _ _ _ _ _ # sent_id = 6475 # text = In the present report, high-resolution mapping of this site with DNase I and micrococcal nuclease identified a nucleosome-free region centered around nucleotides (nt) 4490 to 4766. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 resolution resolution NOUN NN Number=Sing _ _ _ _ 9 mapping mapping NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 DNase DNase NOUN NN Number=Sing _ _ _ _ 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 micrococcal micrococcal ADJ JJ Degree=Pos _ _ _ _ 18 nuclease nuclease NOUN NN Number=Sing _ _ _ _ 19 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 nucleosome nucleosome ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 free free ADJ JJ Degree=Pos _ _ _ _ 24 region region NOUN NN Number=Sing _ _ _ _ 25 centered center VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 around around ADP IN _ _ _ _ _ 27 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 nt not PART RB _ _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 4490 4490 NUM CD NumType=Card _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 4766 4766 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 6476 # text = A 500-bp fragment encompassing this hypersensitive site (nt 4481 to 4982) exhibited transcription-enhancing activity (two- to threefold) when it was cloned in its natural position with respect to the HIV-1 promoter after transient transfection in U937 and CEM cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 500 500 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 bp bp NOUN NN Number=Sing _ _ _ _ 5 fragment fragment NOUN NN Number=Sing _ _ _ _ 6 encompassing encompasse VERB VBG VerbForm=Ger _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 9 site site NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 nt not PART RB _ _ _ _ _ 12 4481 4481 NUM CD NumType=Card _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 4982 4982 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 exhibited exhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 enhancing enhancing NOUN NN Number=Sing _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 threefold threefold VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 when when ADV WRB PronType=Int _ _ _ _ 28 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 cloned clon VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 33 natural natural ADJ JJ Degree=Pos _ _ _ _ 34 position position NOUN NN Number=Sing _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 respect respect NOUN NN Number=Sing _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT , _ _ _ _ SpaceAfter=No 41 1 1 NUM CD NumType=Card _ _ _ _ 42 promoter promoter NOUN NN Number=Sing _ _ _ _ 43 after after ADP IN _ _ _ _ _ 44 transient transient ADJ JJ Degree=Pos _ _ _ _ 45 transfection transfection NOUN NN Number=Sing _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 U937 U937 NUM CD NumType=Card _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 CEM cem PROPN NNP Number=Sing _ _ _ _ 50 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 6477 # text = Using in vitro footprinting and gel shift assays, we have identified four distinct binding sites for nuclear proteins within this positive regulatory element. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 vitro vitro NOUN NN Number=Sing _ _ _ _ 4 footprinting footprinting NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 gel gel NOUN NN Number=Sing _ _ _ _ 7 shift shift NOUN NN Number=Sing _ _ _ _ 8 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 four four NUM CD NumType=Card _ _ _ _ 14 distinct distinct NOUN NN Number=Sing _ _ _ _ 15 binding binding VERB VBG VerbForm=Ger _ _ _ _ 16 sites site NOUN NNS Number=Plur _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 proteins protein NOUN NNS Number=Plur _ _ _ _ 20 within within ADP IN _ _ _ _ _ 21 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 22 positive positive ADJ JJ Degree=Pos _ _ _ _ 23 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 24 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 6478 # text = Site B (nt 4519 to 4545) specifically bound four distinct nuclear protein complexes: a ubiquitous factor, a T-cell-specific factor, a B-cell-specific factor, and the monocyte/macrophage- and B-cell-specific transcription factor PU.1/Spi-1. 1 Site site PROPN NNP Number=Sing _ _ _ _ 2 B b PROPN NNP Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 nt not PART RB _ _ _ _ _ 5 4519 4519 NUM CD NumType=Card _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 4545 4545 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 specifically specifically ADV RB _ _ _ _ _ 10 bound bound ADP IN _ _ _ _ _ 11 four four NUM CD NumType=Card _ _ _ _ 12 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 : : PUNCT : _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 T-cell T-cell ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 specific specific ADJ JJ Degree=Pos _ _ _ _ 32 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 / / PUNCT , _ _ _ _ SpaceAfter=No 38 macrophage macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 B- B- NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 specific specific ADJ JJ Degree=Pos _ _ _ _ 45 transcription transcription NOUN NN Number=Sing _ _ _ _ 46 factor factor NOUN NN Number=Sing _ _ _ _ 47 PU.1/ PU.1/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 48 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 6479 # text = In most HIV-1 isolates in which this PU box was not conserved, it was replaced by a binding site for the related factor Ets1. 1 In in ADP IN _ _ _ _ _ 2 most most ADJ JJS Degree=Sup _ _ _ _ 3 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 isolates isolate NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 10 PU Pu NOUN NN Number=Sing _ _ _ _ 11 box box NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 conserved conserve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 replaced replace VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 binding bind VERB VBG VerbForm=Ger _ _ _ _ 22 site site NOUN NN Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 related related ADJ JJ Degree=Pos _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ _ 27 Ets1 ets1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 6480 # text = Factors binding to site C (nt 4681 to 4701) had a DNA-binding specificity similar to that of factors binding to site B, except for PU.1/Spi-1. 1 Factors factor NOUN NNS Number=Plur _ _ _ _ 2 binding bind VERB VBG VerbForm=Ger _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 site site NOUN NN Number=Sing _ _ _ _ 5 C C PROPN NNP Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 nt not PART RB _ _ _ _ _ 8 4681 4681 NUM CD NumType=Card _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 4701 4701 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 specificity specificity NOUN NN Number=Sing _ _ _ _ 18 similar similar ADJ JJ Degree=Pos _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ _ 23 binding bind VERB VBG VerbForm=Ger _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 site site NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 except except ADP IN _ _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 PU.1/ Pu.1/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 Spi-1 spi-1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 6481 # text = A GC box containing a binding site for Sp1 was identified (nt 4623 to 4631). 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 GC Gc NOUN NN Number=Sing _ _ _ _ 3 box box NOUN NN Number=Sing _ _ _ _ 4 containing contain VERB VBG VerbForm=Ger _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 binding binding VERB VBG VerbForm=Ger _ _ _ _ 7 site site NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 nt not PART RB _ _ _ _ _ 14 4623 4623 NUM CD NumType=Card _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 4631 4631 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 6482 # text = Site D (nt 4816 to 4851) specifically bound a ubiquitously expressed factor. 1 Site site PROPN NNP Number=Sing _ _ _ _ 2 D d PROPN NNP Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 nt not PART RB _ _ _ _ _ 5 4816 4816 NUM CD NumType=Card _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 4851 4851 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 specifically specifically ADV RB _ _ _ _ _ 10 bound bound VERB VB VerbForm=Inf _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 ubiquitously ubiquitously ADV RB _ _ _ _ _ 13 expressed expressed VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 6483 # text = These results identify a transcriptional regulatory element associated with a nuclease-hypersensitive site in the pol gene of HIV-1 and suggest that its activity may be controlled by a complex interplay of cis-regulatory elements. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 identify identify VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 6 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 7 element element NOUN NN Number=Sing _ _ _ _ 8 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 nuclease nuclease NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 pol pol NOUN NN Number=Sing _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ _ 28 may may AUX MD VerbForm=Fin _ _ _ _ 29 be be AUX VB VerbForm=Inf _ _ _ _ 30 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 complex complex ADJ JJ Degree=Pos _ _ _ _ 34 interplay interplay NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 cis-regulatory cis-regulatory ADJ JJ Degree=Pos _ _ _ _ 37 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6484 # text = Document 003001725 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001725 003001725 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6485 # text = Induction of endothelial cell surface adhesion molecules by tumor necrosis factor is blocked by protein tyrosine phosphatase inhibitors: role of the nuclear transcription factor NF-kappa B. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 surface surface NOUN NN Number=Sing _ _ _ _ 6 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 7 molecules molecule NOUN NNS Number=Plur _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 tumor tumor NOUN NN Number=Sing _ _ _ _ 10 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 17 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 18 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 : : PUNCT : _ _ _ _ _ 20 role role NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6486 # text = Recent studies from our laboratory have indicated that protein tyrosine phosphatase (PTPase) inhibitors can down-modulate the tumor necrosis factor (TNF)-mediated activation of the nuclear transcription factor NF-kappa B in ML-1a, a monocytic cell line (Singh and Aggarwal, J. Biol. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 5 laboratory laboratory NOUN NN Number=Sing _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 indicated indicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 11 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 PTPase PTPase NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 16 can can AUX MD VerbForm=Fin _ _ _ _ 17 down down ADV RB _ _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 tumor tumor NOUN NN Number=Sing _ _ _ _ 22 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 factor factor NOUN NN Number=Sing _ _ _ _ 35 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 kappa kappa PROPN NNP Number=Sing _ _ _ _ 38 B b PROPN NNP Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 ML Ml PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 -1a -1a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 44 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 45 cell cell NOUN NN Number=Sing _ _ _ _ 46 line line NOUN NN Number=Sing _ _ _ _ 47 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 48 Singh Singh PROPN NNP Number=Sing _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 Aggarwal Aggarwal PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 , , PUNCT , _ _ _ _ _ 52 J. J. PROPN NNP Number=Sing _ _ _ _ 53 Biol Biol PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 6487 # text = Chem. 1995: 270: 10631). 1 Chem. Chem. PROPN NNP Number=Sing _ _ _ _ 2 1995 1995 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 : : PUNCT : _ _ _ _ _ 4 270 270 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 : : PUNCT : _ _ _ _ _ 6 10631 10631 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 6488 # text = Since TNF is one of the major inducers of various adhesion molecules in human endothelial cells and their expression is known to require the activation of NF-kappa B, we examined the effect of PTPase inhibitors on the TNF-mediated induction of intracellular adhesion molecule (ICAM)-1, vascular cell adhesion molecule (VCAM)-1 and endothelial leukocyte adhesion molecule (ELAM)-1. 1 Since since SCONJ IN _ _ _ _ _ 2 TNF TNF PROPN NNP Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 one one NUM CD NumType=Card _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 major major ADJ JJ Degree=Pos _ _ _ _ 8 inducers inducer NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 various various ADJ JJ Degree=Pos _ _ _ _ 11 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 12 molecules molecule NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 require require VERB VB VerbForm=Inf _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 33 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 effect effect NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 PTPase PTPase NOUN NN Number=Sing _ _ _ _ 38 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 39 on on ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 induction induction NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 47 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 48 molecule molecule NOUN NN Number=Sing _ _ _ _ 49 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 50 ICAM ICAm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 54 , , PUNCT , _ _ _ _ _ 55 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 56 cell cell NOUN NN Number=Sing _ _ _ _ 57 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 58 molecule molecule NOUN NN Number=Sing _ _ _ _ 59 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 60 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 61 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 62 - - SYM SYM _ _ _ _ SpaceAfter=No 63 1 1 NUM CD NumType=Card _ _ _ _ 64 and and CCONJ CC _ _ _ _ _ 65 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 66 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 67 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 68 molecule molecule NOUN NN Number=Sing _ _ _ _ 69 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 70 ELAM ELAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 71 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 72 - - SYM SYM _ _ _ _ SpaceAfter=No 73 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 74 . . PUNCT . _ _ _ _ _ # sent_id = 6489 # text = Like ML-1a, human dermal microvessel endothelial cells (MVEC) treated with TNF rapidly activated (within 30 min) NF-kappa B; this effect was completely abolished by co-treatment with phenylarsine oxide (PAO), a specific inhibitor of PTPase. 1 Like like ADP IN _ _ _ _ _ 2 ML Ml ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 -1a -1a NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 dermal dermal ADJ JJ Degree=Pos _ _ _ _ 7 microvessel microvessel NOUN NN Number=Sing _ _ _ _ 8 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 MVEC MVEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 treated treat VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 TNF TNF PROPN NNP Number=Sing _ _ _ _ 16 rapidly rapidly ADV RB _ _ _ _ _ 17 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 within within ADP IN _ _ _ _ _ 20 30 30 NUM CD NumType=Card _ _ _ _ 21 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ; ; PUNCT , _ _ _ _ _ 28 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 29 effect effect NOUN NN Number=Sing _ _ _ _ 30 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 31 completely completely ADV RB _ _ _ _ _ 32 abolished abolish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 co-treatment co-treatment NOUN NN Number=Sing _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 phenylarsine phenylarsine NOUN NN Number=Sing _ _ _ _ 37 oxide oxide ADV RB _ _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 PAO pao INTJ UH _ _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 specific specific ADJ JJ Degree=Pos _ _ _ _ 44 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 PTPase PTPase NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 6490 # text = The induction of ICAM-1, VCAM-1, and ELAM-1 by TNF in MVEC occurred within 6 h and was also completely down-regulated by PAO in a dose-dependent manner. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 ELAM ELAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 TNF TNF PROPN NNP Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 MVEC MVEC PROPN NNP Number=Sing _ _ _ _ 19 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 within within ADP IN _ _ _ _ _ 21 6 6 NUM CD NumType=Card _ _ _ _ 22 h h NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 also also ADV RB _ _ _ _ _ 26 completely completely ADV RB _ _ _ _ _ 27 down down ADV RB _ _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 PAO pao PROPN NNP Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 37 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 6491 # text = PAO was found to be effective even when added 3 h after TNF, suggesting a rapid mode of action of this inhibitor. 1 PAO pao NOUN NN Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 effective effective ADJ JJ Degree=Pos _ _ _ _ 7 even even ADV RB _ _ _ _ _ 8 when when ADV WRB PronType=Int _ _ _ _ 9 added add VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 3 3 NUM CD NumType=Card _ _ _ _ 11 h h NOUN NN Number=Sing _ _ _ _ 12 after after ADP IN _ _ _ _ _ 13 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 18 mode mode NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 action action NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 23 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 6492 # text = Besides PAO, other inhibitors of PTPase, including pervanadate and diamide, also blocked TNF-dependent NF-kappa B activation and induction of all the three adhesion proteins. 1 Besides besides ADP IN _ _ _ _ _ 2 PAO pao PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 other other ADJ JJ Degree=Pos _ _ _ _ 5 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 PTPase PTPase NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 including include VERB VBG VerbForm=Ger _ _ _ _ 10 pervanadate pervanadate NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 diamide diamide NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 TNF Tnf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 19 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa NOUN NN Number=Sing _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 induction induction NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 all all DET PDT _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 three three NUM CD NumType=Card _ _ _ _ 30 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 31 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 6493 # text = Consistent with these results, the attachment of monocytes to MVEC was also blocked by the PTPase inhibitors. 1 Consistent consistent ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 attachment attachment NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 MVEC MVEC PROPN NNP Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 also also ADV RB _ _ _ _ _ 14 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 PTPase PTPase NOUN NN Number=Sing _ _ _ _ 18 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 6494 # text = Thus, overall, our results demonstrate that a PTPase is involved either directly or indirectly in the pathway leading to the induction of endothelial cell adhesion molecules by TNF. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 overall overall ADV RB _ _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 6 results result NOUN NNS Number=Plur _ _ _ _ 7 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 PTPase PTPase NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 involved involved ADJ JJ Degree=Pos _ _ _ _ 13 either either CCONJ CC _ _ _ _ _ 14 directly directly ADV RB _ _ _ _ _ 15 or or CCONJ CC _ _ _ _ _ 16 indirectly indirectly ADV RB _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 pathway pathway NOUN NN Number=Sing _ _ _ _ 20 leading lead VERB VBG VerbForm=Ger _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 induction induction NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 28 molecules molecule NOUN NNS Number=Plur _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 6495 # text = Because of their role in cell adhesion, PTPase may provide a novel target of drug development for treatment of inflammation, atherogenesis, and tumor metastasis. 1 Because because ADP IN _ _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 PTPase PTPase NOUN NN Number=Sing _ _ _ _ 10 may may AUX MD VerbForm=Fin _ _ _ _ 11 provide provide VERB VB VerbForm=Inf _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 novel novel NOUN NN Number=Sing _ _ _ _ 14 target target NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 drug drug NOUN NN Number=Sing _ _ _ _ 17 development development NOUN NN Number=Sing _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 treatment treatment NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 atherogenesis atherogenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 tumor tumor NOUN NN Number=Sing _ _ _ _ 27 metastasis metastasis NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6496 # text = Document 003001730 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001730 003001730 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6497 # text = Inhibition of activation of transcription factor AP-1 by CD28 signalling in human T-cells. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 CD28 CD28 NUM CD NumType=Card _ _ _ _ 12 signalling signalling NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6498 # text = Co-stimulation of T-lymphocytes by T-cell receptor (TcR) occupancy and activation of the CD28 surface molecule results in enhanced proliferation and interleukin 2 (IL-2) production. 1 Co-stimulation Co-stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 TcR TcR NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 occupancy occupancy NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 18 surface surface NOUN NN Number=Sing _ _ _ _ 19 molecule molecule NOUN NN Number=Sing _ _ _ _ 20 results result NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 26 2 2 NUM CD NumType=Card _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 6499 # text = The increase in IL-2 gene expression triggered by CD28 involves a kappa 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 increase increase NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 triggered trigger VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 12 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 6500 # text = B-like sequence in the 5'-regulatory region of the IL-2 promoter, called CD28-responsive element. 1 B b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 like like ADJ JJ Degree=Pos _ _ _ _ 4 sequence sequence NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ' ' NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 - - PUNCT : _ _ _ _ SpaceAfter=No 10 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 11 region region NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 CD28 CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 23 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 6501 # text = Stimulation of T-cells by agonistic anti-CD28 antibodies in conjunction with phorbol 12-myristate 13-acetate (PMA)- or TcR-derived signals induces the enhanced activation of the transcription factor NF-kappa B. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 agonistic agonistic ADJ JJ Degree=Pos _ _ _ _ 7 anti-CD28 anti-CD28 NUM CD NumType=Card _ _ _ _ 8 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 conjunction conjunction NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 13 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT : _ _ _ _ SpaceAfter=No 15 myristate myristate NOUN NN Number=Sing _ _ _ _ 16 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT : _ _ _ _ SpaceAfter=No 18 acetate acetate NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 - - PUNCT : _ _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 TcR Tcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 signals signal NOUN NNS Number=Plur _ _ _ _ 28 induces induce NOUN NNS Number=Plur _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 activation activation NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ _ 36 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 kappa kappa PROPN NNP Number=Sing _ _ _ _ 39 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 6502 # text = Here we report that CD28 engagement, however, exerts opposite effects on the transcription factor AP-1. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 6 engagement engagement NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 however however ADV RB _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 exerts exert VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 opposite opposite ADJ JJ Degree=Pos _ _ _ _ 12 effects effect NOUN NNS Number=Plur _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 6503 # text = Whereas anti-CD28 together with PMA increased the DNA binding and trans-activation activity of NF-kappa B, PMA-induced activation of AP-1 was significantly suppressed. 1 Whereas whereas ADV RB _ _ _ _ _ 2 anti-CD28 anti-CD28 NUM CD NumType=Card _ _ _ _ 3 together together ADV RB _ _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 PMA PMA PROPN NNP Number=Sing _ _ _ _ 6 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 DNA dna NOUN NN Number=Sing _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 significantly significantly ADV RB _ _ _ _ _ 31 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 6504 # text = The inhibitory effect exerted by anti-CD28 was observed at the level of DNA binding as well as in functional reporter-gene assays. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 3 effect effect NOUN NN Number=Sing _ _ _ _ 4 exerted exert VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 anti-CD28 anti-cd28 NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 at at ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 level level NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 DNA dna NOUN NN Number=Sing _ _ _ _ 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 as as ADV RB _ _ _ _ _ 16 well well ADV RB Degree=Pos _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 functional functional ADJ JJ Degree=Pos _ _ _ _ 20 reporter reporter NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 6505 # text = These results suggest that the two transcription factors are independently regulated and may perform different functions during T-cell activation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 two two NUM CD NumType=Card _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 independently independently ADV RB _ _ _ _ _ 11 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 may may AUX MD VerbForm=Fin _ _ _ _ 14 perform perform VERB VB VerbForm=Inf _ _ _ _ 15 different different ADJ JJ Degree=Pos _ _ _ _ 16 functions function NOUN NNS Number=Plur _ _ _ _ 17 during during ADP IN _ _ _ _ _ 18 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6506 # text = Document 003001731 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001731 003001731 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6507 # text = Integrin-mediated tyrosine phosphorylation and cytokine message induction in monocytic cells. 1 Integrin- Integrin- SYM NFP _ _ _ _ SpaceAfter=No 2 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 4 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 7 message message NOUN NN Number=Sing _ _ _ _ 8 induction induction NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 6508 # text = A possible signaling role for the Syk tyrosine kinase. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 possible possible ADJ JJ Degree=Pos _ _ _ _ 3 signaling signaling NOUN NN Number=Sing _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 Syk Syk PROPN NNP Number=Sing _ _ _ _ 8 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 9 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6509 # text = Activation of cytoplasmic tyrosine kinases is an important aspect of signal transduction mediated by integrins. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 4 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 5 kinases kinase NOUN NNS Number=Plur _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 important important ADJ JJ Degree=Pos _ _ _ _ 9 aspect aspect NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 signal signal ADJ JJ Degree=Pos _ _ _ _ 12 transduction transduction NOUN NN Number=Sing _ _ _ _ 13 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 integrins integrin NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 6510 # text = In the human monocytic cell line THP-1, either integrin-dependent cell adhesion to fibronectin or ligation of beta 1 integrins with antibodies causes a rapid and intense tyrosine phosphorylation of two sets of proteins of about 65-75 and 120-125 kDa. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 line line NOUN NN Number=Sing _ _ _ _ 7 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 either either CCONJ CC _ _ _ _ _ 12 integrin integrin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 fibronectin fibronectin NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 ligation ligation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 beta beta NOUN NN Number=Sing _ _ _ _ 23 1 1 NUM CD NumType=Card _ _ _ _ 24 integrins integrin NOUN NNS Number=Plur _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 27 causes cause NOUN NNS Number=Plur _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 intense intense ADJ JJ Degree=Pos _ _ _ _ 32 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 33 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 two two NUM CD NumType=Card _ _ _ _ 36 sets set NOUN NNS Number=Plur _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 proteins protein NOUN NNS Number=Plur _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 about about ADP IN _ _ _ _ _ 41 65 65 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 - - SYM SYM _ _ _ _ SpaceAfter=No 43 75 75 NUM CD NumType=Card _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 120 120 NUM CD NumType=Card _ _ _ SpaceAfter=No 46 - - SYM SYM _ _ _ _ SpaceAfter=No 47 125 125 NUM CD NumType=Card _ _ _ _ 48 kDa kDa NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 6511 # text = In addition, integrin ligation leads to nuclear translocation of the p50 and p65 subunits of the NF-kappa B transcription factor, to activation of a reporter gene driven by a promoter containing NF-kappa B sites, and to increased levels of mRNAs for immediate-early genes, including the cytokine interleukin (IL)-1 beta. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 integrin integrin ADJ JJ Degree=Pos _ _ _ _ 5 ligation ligation NOUN NN Number=Sing _ _ _ _ 6 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 nuclear nuclear VERB VB VerbForm=Inf _ _ _ _ 9 translocation translocation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 p50 p50 NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 p65 p65 NOUN NN Number=Sing _ _ _ _ 15 subunits subunit NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 reporter reporter NOUN NN Number=Sing _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ _ 31 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 promoter promoter NOUN NN Number=Sing _ _ _ _ 35 containing contain VERB VBG VerbForm=Ger _ _ _ _ 36 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 kappa kappa NOUN NN Number=Sing _ _ _ _ 39 B b NOUN NN Number=Sing _ _ _ _ 40 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 to to ADP IN _ _ _ _ _ 44 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 levels level NOUN NNS Number=Plur _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 mRNAs mRNA NOUN NNS Number=Plur _ _ _ _ 48 for for ADP IN _ _ _ _ _ 49 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 early early ADJ JJ Degree=Pos _ _ _ _ 52 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 , , PUNCT , _ _ _ _ _ 54 including include VERB VBG VerbForm=Ger _ _ _ _ 55 the the DET DT Definite=Def|PronType=Art _ _ _ _ 56 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 57 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 58 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 59 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 60 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 61 - - SYM SYM _ _ _ _ SpaceAfter=No 62 1 1 NUM CD NumType=Card _ _ _ _ 63 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 64 . . PUNCT . _ _ _ _ _ # sent_id = 6512 # text = The tyrosine kinase inhibitors genistein and herbimycin A block both integrin-mediated tyrosine phosphorylation and increases in IL-1 beta message levels, indicating a causal relationship between the two events. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 3 kinase kinase NOUN NN Number=Sing _ _ _ _ 4 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 5 genistein genistein VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 herbimycin herbimycin VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 block block NOUN NN Number=Sing _ _ _ _ 10 both both CCONJ CC _ _ _ _ _ 11 integrin- integrin- SYM NFP _ _ _ _ SpaceAfter=No 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 14 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 increases increase NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 beta beta NOUN NN Number=Sing _ _ _ _ 22 message message NOUN NN Number=Sing _ _ _ _ 23 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 causal causal ADJ JJ Degree=Pos _ _ _ _ 28 relationship relationship NOUN NN Number=Sing _ _ _ _ 29 between between ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 two two NUM CD NumType=Card _ _ _ _ 32 events event NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 6513 # text = The components tyrosine phosphorylated subsequent to cell adhesion include paxillin, pp125FAK, and the SH2 domain containing tyrosine kinase Syk. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 components component NOUN NNS Number=Plur _ _ _ _ 3 tyrosine tyrosine PRON PRP _ _ _ _ _ 4 phosphorylated phosphorylate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 cell cell VERB VB VerbForm=Inf _ _ _ _ 8 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 9 include include VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 paxillin paxillin NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 pp125FAK pp125fak NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 SH2 Sh2 NOUN NN Number=Sing _ _ _ _ 17 domain domain NOUN NN Number=Sing _ _ _ _ 18 containing contain VERB VBG VerbForm=Ger _ _ _ _ 19 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 20 kinase kinase NOUN NN Number=Sing _ _ _ _ 21 Syk Syk PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 6514 # text = In contrast, integrin ligation with antibodies induces tyrosine phosphorylation of Syk but not of FAK or paxillin. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 integrin integrin ADJ JJ Degree=Pos _ _ _ _ 5 ligation ligation NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 8 induces induce NOUN NNS Number=Plur _ _ _ _ 9 tyrosine tyrosine VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 Syk Syk PROPN NNP Number=Sing _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 FAK Fak NUM CD NumType=Card _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 paxillin paxillin NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 6515 # text = In adhering cells, pre-treatment with cytochalasin D suppresses tyrosine phosphorylation of FAK and paxillin but not of Syk, while IL-1 beta message induction is unaffected. 1 In in ADP IN _ _ _ _ _ 2 adhering adhere ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 pre-treatment pre-treatment ADJ JJ Degree=Pos _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 cytochalasin cytochalasin NOUN NN Number=Sing _ _ _ _ 8 D d NOUN NN Number=Sing _ _ _ _ 9 suppresses suppress VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 tyrosine tyrosine PRON PRP _ _ _ _ _ 11 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 FAK Fak NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 paxillin paxillin NOUN NN Number=Sing _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 not not PART RB _ _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 Syk Syk PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 while while SCONJ IN _ _ _ _ _ 22 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 beta beta NOUN NN Number=Sing _ _ _ _ 26 message message NOUN NN Number=Sing _ _ _ _ 27 induction induction NOUN NN Number=Sing _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 unaffected unaffected ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 6516 # text = These observations indicate that the Syk tyrosine kinase may be an important component of an integrin signaling pathway in monocytic cells, leading to activation of NF-kappa B and to increased levels of cytokine messages. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 Syk Syk PROPN NNP Number=Sing _ _ _ _ 7 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 8 kinase kinase NOUN NN Number=Sing _ _ _ _ 9 may may AUX MD VerbForm=Fin _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 important important ADJ JJ Degree=Pos _ _ _ _ 13 component component NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 integrin integrin ADJ JJ Degree=Pos _ _ _ _ 17 signaling signaling NOUN NN Number=Sing _ _ _ _ 18 pathway pathway NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 leading lead VERB VBG VerbForm=Ger _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa PROPN NNP Number=Sing _ _ _ _ 30 B b PROPN NNP Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 levels level NOUN NNS Number=Plur _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 cytokine cytokine ADJ JJ Degree=Pos _ _ _ _ 37 messages message NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6517 # text = Document 003001735 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001735 003001735 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6518 # text = Induction of human immunodeficiency virus type 1 expression in monocytic cells by Cryptococcus neoformans and Candida albicans. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 type type NOUN NN Number=Sing _ _ _ _ 7 1 1 NUM CD NumType=Card _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 Cryptococcus Cryptococcus PROPN NNP Number=Sing _ _ _ _ 14 neoformans neoformans PROPN NNPS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 Candida Candida PROPN NNP Number=Sing _ _ _ _ 17 albicans albicans PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6519 # text = Because candidiasis and cryptococcosis are common in human immunodeficiency virus (HIV)-infected persons, the effect of Cryptococcus neoformans and Candida albicans on HIV expression in monocytic cells was examined. 1 Because because SCONJ IN _ _ _ _ _ 2 candidiasis candidiasis NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 cryptococcosis cryptococcosis NOUN NN Number=Sing _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 common common ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 10 virus virus NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 persons person NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 effect effect NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 Cryptococcus Cryptococcus PROPN NNP Number=Sing _ _ _ _ 22 neoformans neoforman PROPN NNPS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 Candida Candida PROPN NNP Number=Sing _ _ _ _ 25 albicans albicans PROPN NNPS Number=Plur _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 HIV HIV PROPN NNP Number=Sing _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 33 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 6520 # text = Stimulation of the latently HIV-infected myelomonocytic cell line OM-10.1 with C. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 latently latently ADJ JJ Degree=Pos _ _ _ _ 5 HIV- HIV- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 myelomonocytic myelomonocytic ADJ JJ Degree=Pos _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 line line NOUN NN Number=Sing _ _ _ _ 10 OM Om NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 10.1 10.1 NUM CD NumType=Card _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 C. c. PROPN NNP Number=Sing _ _ _ _ # sent_id = 6521 # text = neoformans and C. albicans in the presence of pooled human serum caused a ratio-dependent increase in HIV production. 1 neoformans neoforman NOUN NNS Number=Plur _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 C. c. PROPN NNP Number=Sing _ _ _ _ 4 albicans albicans PROPN NNPS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 presence presence NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 pooled pool ADJ JJ Degree=Pos _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 serum serum NOUN NN Number=Sing _ _ _ _ 12 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 ratio ratio NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 17 increase increase NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 HIV HIV PROPN NNP Number=Sing _ _ _ _ 20 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 6522 # text = Induction of HIV by C. neoformans was enhanced by anti-capsular antibody, while induction by both organisms was inhibited by anti-TNF-alpha antibody. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HIV HIV PROPN NNP Number=Sing _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 C. c. PROPN NNP Number=Sing _ _ _ _ 6 neoformans neoforman NOUN NNS Number=Plur _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 anti-capsular anti-capsular ADJ JJ Degree=Pos _ _ _ _ 11 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 while while SCONJ IN _ _ _ _ _ 14 induction induction NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 both both DET DT _ _ _ _ _ 17 organisms organism NOUN NNS Number=Plur _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 anti-TNF anti-TNF ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 6523 # text = In THP-1 cells transfected with HIV plasmid constructs, both organisms induced transcription from the HIV long terminal repeat that was dependent on intact NF-kappaB binding sequences. 1 In in ADP IN _ _ _ _ _ 2 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 HIV HIV NOUN NN Number=Sing _ _ _ _ 9 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 10 constructs constructs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 both both CCONJ CC _ _ _ _ _ 13 organisms organism NOUN NNS Number=Plur _ _ _ _ 14 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 from from ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 HIV HIV PROPN NNP Number=Sing _ _ _ _ 19 long long ADJ JJ Degree=Pos _ _ _ _ 20 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 21 repeat repeat NOUN NN Number=Sing _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 intact intact ADJ JJ Degree=Pos _ _ _ _ 27 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappaB kappab PROPN NNP Number=Sing _ _ _ _ 30 binding binding VERB VBG VerbForm=Ger _ _ _ _ 31 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 6524 # text = Thus, C. neoformans and C. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 C. c. PROPN NNP Number=Sing _ _ _ _ 4 neoformans neoforman PROPN NNPS Number=Plur _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 C. c. PROPN NNP Number=Sing _ _ _ _ # sent_id = 6525 # text = albicans enhance HIV expression in monocytic cells through a TNF-alpha- and NF-kappaB-dependent mechanism. 1 albicans albican ADV RB _ _ _ _ _ 2 enhance enhance VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 3 HIV Hiv X GW _ _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 through through ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 20 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 6526 # text = In HIV-infected patients, such enhancement may further impair host immunity and could accelerate the course of HIV disease. 1 In in ADP IN _ _ _ _ _ 2 HIV- HIV- PUNCT : _ _ _ _ SpaceAfter=No 3 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 such such ADJ JJ Degree=Pos _ _ _ _ 7 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 8 may may AUX MD VerbForm=Fin _ _ _ _ 9 further further ADV RB _ _ _ _ _ 10 impair impair ADJ JJ Degree=Pos _ _ _ _ 11 host host NOUN NN Number=Sing _ _ _ _ 12 immunity immunity NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 could could AUX MD VerbForm=Fin _ _ _ _ 15 accelerate accelerate VERB VB VerbForm=Inf _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 course course NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 HIV Hiv NOUN NN Number=Sing _ _ _ _ 20 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6527 # text = Document 003001739 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001739 003001739 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6528 # text = Sterol dependent LDL-receptor gene transcription in lymphocytes from normal and CML patients. 1 Sterol Sterol PROPN NNP Number=Sing _ _ _ _ 2 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 3 LDL Ldl NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 receptor receptor NOUN NN Number=Sing _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 normal normal ADJ JJ Degree=Pos _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 CML cml ADJ JJ Degree=Pos _ _ _ _ 14 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6529 # text = Sterol regulatory element (SRE) has been recognized to regulate various key genes coding for especially low density lipoprotein (LDL)-receptor, 3-hydroxy-3-methylglutaryl coenzyme A (HMG-CoA) reductase and HMG-CoA synthase known to play a crucial role in the cholesterol feedback mechanism. 1 Sterol Sterol PROPN NNP Number=Sing _ _ _ _ 2 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 3 element element NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 SRE SRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 9 recognized recognize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 12 various various ADJ JJ Degree=Pos _ _ _ _ 13 key key ADJ JJ Degree=Pos _ _ _ _ 14 genes gene NOUN NNS Number=Plur _ _ _ _ 15 coding code VERB VBG VerbForm=Ger _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 especially especially ADV RB _ _ _ _ _ 18 low low ADJ JJ Degree=Pos _ _ _ _ 19 density density NOUN NN Number=Sing _ _ _ _ 20 lipoprotein lipoprotein NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 LDL LDL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 3- 3- SYM NFP _ _ _ _ SpaceAfter=No 28 hydroxy hydroxy NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 methylglutaryl methylglutaryl NOUN NN Number=Sing _ _ _ _ 33 coenzyme coenzyme NOUN NN Number=Sing _ _ _ _ 34 A A PROPN NNP Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 HMG HMG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 CoA CoA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 reductase reductase NOUN NN Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 HMG HMG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 CoA CoA PROPN NNP Number=Sing _ _ _ _ 45 synthase synthase NOUN NN Number=Sing _ _ _ _ 46 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 to to PART TO _ _ _ _ _ 48 play play VERB VB VerbForm=Inf _ _ _ _ 49 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 50 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 51 role role NOUN NN Number=Sing _ _ _ _ 52 in in ADP IN _ _ _ _ _ 53 the the DET DT Definite=Def|PronType=Art _ _ _ _ 54 cholesterol cholesterol NOUN NN Number=Sing _ _ _ _ 55 feedback feedback NOUN NN Number=Sing _ _ _ _ 56 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 6530 # text = The deranged cholesterol feedback mechanism has been widely recognised in initiation as well as progression of various types of cancers including chronic myeloid leukaemia (CML). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 deranged derange VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 cholesterol cholesterol NOUN NN Number=Sing _ _ _ _ 4 feedback feedback NOUN NN Number=Sing _ _ _ _ 5 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 6 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 widely widely ADV RB _ _ _ _ _ 9 recognised recognise VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 initiation initiation NOUN NN Number=Sing _ _ _ _ 12 as as ADV RB _ _ _ _ _ 13 well well ADV RB Degree=Pos _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 progression progression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 various various ADJ JJ Degree=Pos _ _ _ _ 18 types type NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 cancers cancer NOUN NNS Number=Plur _ _ _ _ 21 including include VERB VBG VerbForm=Ger _ _ _ _ 22 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 23 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 24 leukaemia leukaemia NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 CML CML NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 6531 # text = Consequently, the present study was addressed to understand this phenomenon and revealed the existence of a unique 47 kDa protein factor having affinity for this SRE sequence in lymphocytes from normal subjects as well as its absence in lymphocytes from untreated CML patients. 1 Consequently consequently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 present present ADJ JJ Degree=Pos _ _ _ _ 5 study study NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 addressed address VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 understand understand VERB VB VerbForm=Inf _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 phenomenon phenomenon NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 existence existence NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 unique unique ADJ JJ Degree=Pos _ _ _ _ 19 47 47 NUM CD NumType=Card _ _ _ _ 20 kDa kDa PROPN NNP Number=Sing _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 having have VERB VBG VerbForm=Ger _ _ _ _ 24 affinity affinity NOUN NN Number=Sing _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 27 SRE Sre NOUN NN Number=Sing _ _ _ _ 28 sequence sequence NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 31 from from ADP IN _ _ _ _ _ 32 normal normal ADJ JJ Degree=Pos _ _ _ _ 33 subjects subjects NOUN NNS Number=Plur _ _ _ _ 34 as as ADV RB _ _ _ _ _ 35 well well ADV RB Degree=Pos _ _ _ _ 36 as as ADP IN _ _ _ _ _ 37 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 38 absence absence NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 41 from from ADP IN _ _ _ _ _ 42 untreated untreated ADJ JJ Degree=Pos _ _ _ _ 43 CML cml NOUN NN Number=Sing _ _ _ _ 44 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 6532 # text = However, this factor appeared when the CML patients achieved complete haematological remission (CHR) through alpha-interferon therapy. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 when when ADV WRB PronType=Int _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 CML CML PROPN NNP Number=Sing _ _ _ _ 9 patients patient NOUN NN Number=Sing _ _ _ _ 10 achieved achieve VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 complete complete ADJ JJ Degree=Pos _ _ _ _ 12 haematological haematological ADJ JJ Degree=Pos _ _ _ _ 13 remission remission NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 CHR CHR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 through through ADP IN _ _ _ _ _ 18 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 interferon interferon ADJ JJ Degree=Pos _ _ _ _ 21 therapy therapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 6533 # text = Further, an inverse relationship was also observed between sterol modulated LDL-receptor gene transcription and the binding affinity of this 47 kDa factor to the SRE sequence. 1 Further further ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 inverse inverse ADJ JJ Degree=Pos _ _ _ _ 5 relationship relationship NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 between between ADP IN _ _ _ _ _ 10 sterol sterol NOUN NN Number=Sing _ _ _ _ 11 modulated modulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 LDL LDL NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 affinity affinity NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 23 47 47 NUM CD NumType=Card _ _ _ _ 24 kDa kDa PROPN NNP Number=Sing _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 SRE Sre PROPN NNP Number=Sing _ _ _ _ 29 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 6534 # text = Based upon these results we propose that alpha-interferon through its receptor initiates phosphatidic acid dependent signalling which in turn regulates the affinity of 47 kDa sterol regulatory element binding factor as well as LDL-receptor gene transcription in lymphocytes from CML patients. 1 Based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 upon upon ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 interferon interferon NOUN NN Number=Sing _ _ _ _ 11 through through ADP IN _ _ _ _ _ 12 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ _ 14 initiates initiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 phosphatidic phosphatidic ADJ JJ Degree=Pos _ _ _ _ 16 acid acid ADJ JJ Degree=Pos _ _ _ _ 17 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 18 signalling signalling NOUN NN Number=Sing _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 turn turn NOUN NN Number=Sing _ _ _ _ 22 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 affinity affinity NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 47 47 NUM CD NumType=Card _ _ _ _ 27 kDa kDa PROPN NNP Number=Sing _ _ _ _ 28 sterol sterol NOUN NN Number=Sing _ _ _ _ 29 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 30 element element NOUN NN Number=Sing _ _ _ _ 31 binding bind VERB VBG VerbForm=Ger _ _ _ _ 32 factor factor NOUN NN Number=Sing _ _ _ _ 33 as as ADV RB _ _ _ _ _ 34 well well ADV RB Degree=Pos _ _ _ _ 35 as as ADP IN _ _ _ _ _ 36 LDL LDL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT , _ _ _ _ SpaceAfter=No 38 receptor receptor NOUN NN Number=Sing _ _ _ _ 39 gene gene NOUN NN Number=Sing _ _ _ _ 40 transcription transcription NOUN NN Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 43 from from ADP IN _ _ _ _ _ 44 CML CML PROPN NNP Number=Sing _ _ _ _ 45 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6535 # text = Document 003001741 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001741 003001741 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6536 # text = Regulation of IL-6 synthesis in human peripheral blood mononuclear cells by C3a and C3a(desArg). 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 6 6 NUM CD NumType=Card _ _ _ _ 6 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 10 blood blood NOUN NN Number=Sing _ _ _ _ 11 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 C3 C3 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 C3a C3a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 desArg desArg PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6537 # text = The anaphylatoxin C3a has been reported to have immunomodulatory effects on a number of different cell types. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 anaphylatoxin anaphylatoxin NOUN NN Number=Sing _ _ _ _ 3 C3 C3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 a a NOUN NN Number=Sing _ _ _ _ 5 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 7 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 have have VERB VB VerbForm=Inf _ _ _ _ 10 immunomodulatory immunomodulatory ADJ JJ Degree=Pos _ _ _ _ 11 effects effect NOUN NNS Number=Plur _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 number number NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 different different ADJ JJ Degree=Pos _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 6538 # text = In this study we investigated the effects of C3a and C3a(desArg) on gene expression and protein secretion of IL-6 in human PBMCs, either alone or in combination with LPS or IL-1beta. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 effects effect NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 C3 C3 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 C3a C3a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 desArg desArg PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 secretion secretion NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 6 6 NUM CD NumType=Card _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 human human ADJ JJ Degree=Pos _ _ _ _ 28 PBMCs PBMC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 either either CCONJ CC _ _ _ _ _ 31 alone alone ADJ JJ Degree=Pos _ _ _ _ 32 or or CCONJ CC _ _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 combination combination NOUN NN Number=Sing _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 LPS LPS PROPN NNP Number=Sing _ _ _ _ 37 or or CCONJ CC _ _ _ _ _ 38 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 1beta 1beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 6539 # text = C3a or C3a(desArg) alone exhibited no effect on the expression or secretion of IL-6. 1 C3 C3 VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 or or CCONJ CC _ _ _ _ _ 4 C3a C3a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 desArg desArg PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 alone alone ADV RB _ _ _ _ _ 9 exhibited exhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 no no DET DT _ _ _ _ _ 11 effect effect NOUN NN Number=Sing _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 or or CCONJ CC _ _ _ _ _ 16 secretion secretion NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 6540 # text = However, when PBMC were stimulated with LPS or IL-1beta, both C3a and C3a(desArg) were found to enhance IL-6 release by PBMC in a dose-dependent manner. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 when when ADV WRB PronType=Int _ _ _ _ 4 PBMC PBMC NOUN NN Number=Sing _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 LPS LPS PROPN NNP Number=Sing _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 both both DET DT _ _ _ _ _ 15 C3 C3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 C3a C3a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 desArg desArg PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 26 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 6 6 NUM CD NumType=Card _ _ _ _ 29 release release NOUN NN Number=Sing _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 PBMC PBMC PROPN NNP Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 37 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 6541 # text = Since C3a has been shown to induce PGE2 production by monocytes, and PGE2 has been shown to influence cytokine production, we investigated the potential role of PGE2 in C3a-mediated enhancement of LPS- and IL-1beta-induced IL-6 production. 1 Since since ADP IN _ _ _ _ _ 2 C3 C3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 a a NOUN NN Number=Sing _ _ _ _ 4 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 6 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 induce induce VERB VB VerbForm=Inf _ _ _ _ 9 PGE2 PGE2 NUM CD NumType=Card _ _ _ _ 10 production production NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 PGE2 Pge2 NOUN NN Number=Sing _ _ _ _ 16 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 18 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 influence influence NOUN NN Number=Sing _ _ _ _ 21 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 22 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 25 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 potential potential ADJ JJ Degree=Pos _ _ _ _ 28 role role NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 PGE2 PGE2 NUM CD NumType=Card _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 C3 C3 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 a- a- PUNCT : _ _ _ _ SpaceAfter=No 34 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT , _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 1beta 1beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 6 6 NUM CD NumType=Card _ _ _ _ 48 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 6542 # text = Indomethacin blocked PGE2 release, but had no influence on the observed effects of C3a, suggesting that the effects of C3a on IL-6 production are independent of PGE2 formation by monocytes. 1 Indomethacin Indomethacin PROPN NNP Number=Sing _ _ _ _ 2 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 PGE2 PGE2 NUM CD NumType=Card _ _ _ _ 4 release release NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 but but CCONJ CC _ _ _ _ _ 7 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 no no DET DT _ _ _ _ _ 9 influence influence NOUN NN Number=Sing _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 observed observed ADJ JJ Degree=Pos _ _ _ _ 13 effects effect NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 C3a C3a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 effects effect NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 C3a C3a PROPN NNP Number=Sing _ _ _ _ 23 on on ADP IN _ _ _ _ _ 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 6 6 NUM CD NumType=Card _ _ _ _ 27 production production NOUN NN Number=Sing _ _ _ _ 28 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 independent independent ADJ JJ Degree=Pos _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 PGE2 PGE2 NUM CD NumType=Card _ _ _ _ 32 formation formation NOUN NN Number=Sing _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 6543 # text = Northern blot analysis showed that C3a as well as C3a(desArg) enhanced LPS-induced mRNA levels for IL-6. 1 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 C3 C3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 as as ADV RB _ _ _ _ _ 9 well well ADV RB Degree=Pos _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 C3a C3a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 desArg desArg PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 enhanced enhance VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 20 levels level NOUN NNS Number=Plur _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 6544 # text = Pretreatment of PBMCs with pertussis toxin blocked the functions of C3a and C3a(desArg), indicating that the actions of these two molecules are mediated by a G protein-coupled pathway. 1 Pretreatment Pretreatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 PBMCs PBMC NOUN NNS Number=Plur _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 pertussis pertussis DET DT Number=Sing|PronType=Dem _ _ _ _ 6 toxin toxin NOUN NN Number=Sing _ _ _ _ 7 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 functions function NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 C3 C3 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 C3a C3a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 desArg desArg PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 actions action NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 25 two two NUM CD NumType=Card _ _ _ _ 26 molecules molecule NOUN NNS Number=Plur _ _ _ _ 27 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 G g NOUN NN Number=Sing _ _ _ _ 32 protein- protein- PUNCT , _ _ _ _ SpaceAfter=No 33 coupled couple VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 6545 # text = Furthermore, we investigated the effects of C3a and C3a(desArg) on induction of NF-kappaB and activating protein-1 binding. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 effects effect NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 C3 C3 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 C3a C3a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 desArg desArg PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 activating activat VERB VBG VerbForm=Ger _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 binding binding NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 6546 # text = Both molecules enhanced LPS-induced NF-kappaB and activating protein-1 binding activity. 1 Both both DET DT _ _ _ _ _ 2 molecules molecule NOUN NNS Number=Plur _ _ _ _ 3 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 activating activat VERB VBG VerbForm=Ger _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 binding binding VERB VBG VerbForm=Ger _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 6547 # text = These results demonstrate the capacity of intact C3a and its circulating des-Arg form to exert immunmodulatory effects in vitro. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 capacity capacity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 intact intact NOUN NN Number=Sing _ _ _ _ 8 C3 C3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 a a NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 12 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 circulating circulat VERB VBG VerbForm=Ger _ _ _ _ 14 des de NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 Arg Arg ADJ JJ Degree=Pos _ _ _ _ 17 form form NOUN NN Number=Sing _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 exert exert VERB VB VerbForm=Inf _ _ _ _ 20 immunmodulatory immunmodulatory ADJ JJ Degree=Pos _ _ _ _ 21 effects effect NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6548 # text = Document 003001744 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001744 003001744 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6549 # text = Towards a molecular understanding of T-cell differentiation. 1 Towards towards ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 4 understanding understanding NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6550 # text = Lymphoid differentiation is one of the best studied examples of mammalian development. 1 Lymphoid Lymphoid ADJ JJ Degree=Pos _ _ _ _ 2 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 one one NUM CD NumType=Card _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 best best ADJ JJS Degree=Sup _ _ _ _ 8 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 examples example NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 12 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 6551 # text = Here Hans Clevers and Michael Owen describe how the cloning of the genes that encode T-cell-specific membrane proteins allows the identification of transcription factors that control the expression of these T-cell genes. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 Hans Hans PROPN NNPS Number=Plur _ _ _ _ 3 Clevers Clevers PROPN NNPS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 Michael Michael PROPN NNP Number=Sing _ _ _ _ 6 Owen Owen PROPN NNP Number=Sing _ _ _ _ 7 describe describe VERB VB VerbForm=Inf _ _ _ _ 8 how how ADV WRB PronType=Int _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 cloning cloning NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 encode encode VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 T-cell T-cell ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 specific specific ADJ JJ Degree=Pos _ _ _ _ 19 membrane membrane NOUN NN Number=Sing _ _ _ _ 20 proteins protein NOUN NNS Number=Plur _ _ _ _ 21 allows allow VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 identification identification NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 factors factor NOUN NNS Number=Plur _ _ _ _ 27 that that PRON WDT PronType=Rel _ _ _ _ 28 control control VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 33 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 6552 # text = Such transcription factors play a key role in the development of the mature T-cell phenotype by functioning as 'master regulators of T-cell differentiation'. 1 Such such ADJ JJ Degree=Pos _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 play play VERB VB VerbForm=Inf _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 key key ADJ JJ Degree=Pos _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 development development NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 mature mature ADJ JJ Degree=Pos _ _ _ _ 14 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 17 by by SCONJ IN _ _ _ _ _ 18 functioning function VERB VBG VerbForm=Ger _ _ _ _ 19 as as ADP IN _ _ _ _ _ 20 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 21 master master NOUN NN Number=Sing _ _ _ _ 22 regulators regulator NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6553 # text = Document 003001755 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001755 003001755 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6554 # text = Identification of an ionomycin/cyclosporin A-responsive element within the human T cell receptor gamma enhancer. 1 Identification identification NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 ionomycin ionomycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 7 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 10 element element NOUN NN Number=Sing _ _ _ _ 11 within within ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 T T PROPN NNP Number=Sing _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ _ 17 gamma gamma NOUN NN Number=Sing _ _ _ _ 18 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6555 # text = Activation through the Ca2+/calcineurin pathway is essential to the transcription of many cytokine genes. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 through through ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 Ca2 ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 +/ +/ PUNCT HYPH _ _ _ _ SpaceAfter=No 6 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 7 pathway pathway NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 essential essential ADJ JJ Degree=Pos _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 many many ADJ JJ Degree=Pos _ _ _ _ 15 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 16 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 6556 # text = The conserved cis-acting sequence, GGAAAA, and transcription factors binding to this sequence are involved in the response to increased intracellular Ca2+ concentrations. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 -acting -act VERB VBG VerbForm=Ger _ _ _ _ 5 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 GGAAAA GGAAAA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ _ 12 binding bind VERB VBG VerbForm=Ger _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 15 sequence sequence NOUN NN Number=Sing _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 involved involved ADJ JJ Degree=Pos _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 response response NOUN NN Number=Sing _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 24 Ca2 ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 + + SYM SYM _ _ _ _ _ 26 concentrations concentration NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 6557 # text = Here we report the identification and importance of the same sequence in a non-cytokine gene, the human T cell receptor gamma (TCRG) enhancer. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 identification identification NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 importance importance NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 same same ADJ JJ Degree=Pos _ _ _ _ 11 sequence sequence NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 non-cytokine non-cytokine ADJ JJ Degree=Pos _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 T t NOUN NN Number=Sing _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ _ 22 gamma gamma NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 TCRG TCRG NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 6558 # text = Results from site-directed mutations and electrophoretic mobility shift assays strongly suggest that this sequence mediates the ionomycin-induced activation of the TCRG enhancer. 1 Results result NOUN NNS Number=Plur _ _ _ _ 2 from from ADP IN _ _ _ _ _ 3 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 mutations mutation NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 9 mobility mobility NOUN NN Number=Sing _ _ _ _ 10 shift shift NOUN NN Number=Sing _ _ _ _ 11 assays assay NOUN NNS Number=Plur _ _ _ _ 12 strongly strongly ADV RB _ _ _ _ _ 13 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 16 sequence sequence NOUN NN Number=Sing _ _ _ _ 17 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 ionomycin- ionomycin- SYM SYM _ _ _ _ SpaceAfter=No 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 TCRG TCRG PROPN NNP Number=Sing _ _ _ _ 25 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 6559 # text = Our studies provide an explanation for a previous observation that TCRG mRNA levels, but not mRNA levels for T cell receptor alpha and -beta, are increased by ionomycin treatment. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 explanation explanation NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 previous previous ADJ JJ Degree=Pos _ _ _ _ 9 observation observation NOUN NN Number=Sing _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 TCRG TCRG VERB VBG VerbForm=Ger _ _ _ _ 12 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 13 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 not not ADV RB _ _ _ _ _ 17 mRNA mRNa ADJ JJ Degree=Pos _ _ _ _ 18 levels level NOUN NNS Number=Plur _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 receptor receptor NOUN NN Number=Sing _ _ _ _ 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 ionomycin ionomycin ADJ JJ Degree=Pos _ _ _ _ 32 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6560 # text = Document 003001757 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001757 003001757 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6561 # text = Ex vivo activation of tumor-draining lymph node T cells reverses defects in signal transduction molecules. 1 Ex ex ADJ JJ Degree=Pos _ _ _ _ 2 vivo vivo NOUN NN Number=Sing _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 tumor tumor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 -draining -drain VERB VBG VerbForm=Ger _ _ _ _ 7 lymph lymph NOUN NN Number=Sing _ _ _ _ 8 node node NOUN NN Number=Sing _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 reverses reverse VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 defects defect NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 signal signal ADJ JJ Degree=Pos _ _ _ _ 15 transduction transduction NOUN NN Number=Sing _ _ _ _ 16 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6562 # text = The adoptive transfer of tumor-draining lymph node (LN) T cells activated ex vivo with anti-CD3 and interleukin 2 (IL-2) mediates the regression of the poorly immunogenic murine melanoma D5. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 adoptive adoptive ADJ JJ Degree=Pos _ _ _ _ 3 transfer transfer NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 tumor tumor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 draining draining VERB VBG VerbForm=Ger _ _ _ _ 8 lymph lymph NOUN NN Number=Sing _ _ _ _ 9 node node NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 LN LN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 ex ex NUM CD NumType=Card _ _ _ _ 17 vivo vivo NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 22 2 2 NUM CD NumType=Card _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 regression regression NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 poorly poorly ADJ JJ Degree=Pos _ _ _ _ 34 immunogenic immunogenic ADJ JJ Degree=Pos _ _ _ _ 35 murine murine NOUN NN Number=Sing _ _ _ _ 36 melanoma melanoma NOUN NN Number=Sing _ _ _ _ 37 D5 d5 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 6563 # text = The efficacy of the activated LN cells is augmented when the sensitizing tumor is a genetically modified variant (designated D5G6) that secretes granulocyte/macrophage-colony-stimulating factor. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 efficacy efficacy NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 LN Ln NOUN NN Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 augmented augment VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 when when ADV WRB PronType=Int _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 sensitizing sensitizing NOUN NN Number=Sing _ _ _ _ 13 tumor tumor NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 genetically genetically ADV RB _ _ _ _ _ 17 modified modify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 variant variant NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 D5G6 D5G6 NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 that that PRON WDT PronType=Rel _ _ _ _ 24 secretes secrete VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 / / PUNCT , _ _ _ _ SpaceAfter=No 27 macrophage macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 -stimulating -stimulating NOUN NN Number=Sing _ _ _ _ 31 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 6564 # text = In contrast to anti-CD3/IL-2-activated LN cells, adoptive transfer of freshly isolated tumor-draining LN T cells has no therapeutic activity. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 anti-CD3/IL anti-CD3/IL ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 -activated -activated VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 LN Ln ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 adoptive adoptive ADJ JJ Degree=Pos _ _ _ _ 12 transfer transfer NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 freshly freshly ADV RB _ _ _ _ _ 15 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 tumor tumor NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 draining draining VERB VBG VerbForm=Ger _ _ _ _ 19 LN Ln PROPN NNP Number=Sing _ _ _ _ 20 T T PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 no no DET DT _ _ _ _ _ 24 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 6565 # text = To determine whether the acquisition of antitumor function during ex vivo activation is associated with modifications in signal transduction capacity, the protein tyrosine kinases p56lck and p59fyn and proteins of the NF-kappaB family were analyzed in tumor-draining LN T cells. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 acquisition acquisition NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 antitumor antitumor NOUN NN Number=Sing _ _ _ _ 8 function function NOUN NN Number=Sing _ _ _ _ 9 during during ADP IN _ _ _ _ _ 10 ex ex NOUN NN Number=Sing _ _ _ _ 11 vivo vivo NOUN NN Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 modifications modification NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 signal signal NOUN NN Number=Sing _ _ _ _ 19 transduction transduction NOUN NN Number=Sing _ _ _ _ 20 capacity capacity NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ _ 24 tyrosine tyrosine PRON PRP _ _ _ _ _ 25 kinases kinase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 p56lck p56lck NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 p59fyn p59fyn NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 proteins protein NOUN NNS Number=Plur _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 36 family family NOUN NN Number=Sing _ _ _ _ 37 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 38 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 tumor tumor NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT , _ _ _ _ SpaceAfter=No 42 draining drain VERB VBG VerbForm=Ger _ _ _ _ 43 LN Ln PROPN NNP Number=Sing _ _ _ _ 44 T t PROPN NNP Number=Sing _ _ _ _ 45 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 6566 # text = The levels of p56lck and p59fyn were lower in tumor-draining than in normal LN T cells and production of tyrosine-phosphorylated substrates was markedly depressed following anti-CD3 stimulation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p56lck p56lck NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 p59fyn p59fyn NOUN NN Number=Sing _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 lower lower ADJ JJR Degree=Cmp _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 tumor tumor NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 draining drain VERB VBG VerbForm=Ger _ _ _ _ 13 than than ADP IN _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 normal normal ADJ JJ Degree=Pos _ _ _ _ 16 LN LN PROPN NNP Number=Sing _ _ _ _ 17 T T PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 production production NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 tyrosine tyrosine NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 substrates substrate NOUN NNS Number=Plur _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 markedly markedly ADV RB _ _ _ _ _ 28 depressed depress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 following follow VERB VBG VerbForm=Ger _ _ _ _ 30 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 31 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 6567 # text = After 5-day anti-CD3/IL-2 activation, levels of p56lck and p59fyn and protein tyrosine kinase activity increased. 1 After after ADP IN _ _ _ _ _ 2 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 day day NOUN NN Number=Sing _ _ _ _ 5 anti-CD3/IL anti-cd3/il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 levels level NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 p56lck p56lck NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 p59fyn p59fyn NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 18 kinase kinase NOUN NN Number=Sing _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ _ 20 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 6568 # text = Interestingly, the levels of p56lck, p59fyn, and tyrosine kinase activity were higher in activated T cells derived from LN that drained D5G6 than they were in those from D5 tumors. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 levels level NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 p56 p56 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 lck lck NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 p59fyn p59fyn NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 13 kinase kinase NOUN NN Number=Sing _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 higher higher ADJ JJR Degree=Cmp _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 LN LN PROPN NNP Number=Sing _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 drained drain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 D5G6 D5G6 NUM CD NumType=Card _ _ _ _ 27 than than SCONJ IN _ _ _ _ _ 28 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 29 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 32 from from ADP IN _ _ _ _ _ 33 D5 D5 NUM CD NumType=Card _ _ _ _ 34 tumors tumor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 6569 # text = In contrast, the cytoplasmic levels of c-Rel and Rel 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 Rel Rel PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 Rel Rel PROPN NNP Number=Sing _ _ _ _ # sent_id = 6570 # text = A were normal in freshly isolated tumor-draining LN, as was nuclear kappaB DNA-binding activity induced by anti-CD3 mAb or phorbol myristate acetate. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 normal normal ADJ JJ Degree=Pos _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 freshly freshly ADV RB _ _ _ _ _ 6 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 tumor tumor NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 draining draining NOUN NN Number=Sing _ _ _ _ 10 LN Ln NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 as as SCONJ IN _ _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 binding binding VERB VBG VerbForm=Ger _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ _ 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 23 mAb mAb NOUN NN Number=Sing _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 26 myristate myristate NOUN NN Number=Sing _ _ _ _ 27 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 6571 # text = Stimulation of activated LN cells with D5 tumor cells induced the nuclear translocation of NF-kappaB. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 LN Ln ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 D5 d5 NUM CD NumType=Card _ _ _ _ 8 tumor tumor NOUN NN Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 translocation translocation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 6572 # text = These findings indicate that the recovery of proteins mediating signal transduction through the T cell receptor/CD3 complex in LN T cells activated ex vivo was associated with the acquisition of antitumor function. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 recovery recovery NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 proteins protein NOUN NNS Number=Plur _ _ _ _ 9 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 10 signal signal ADJ JJ Degree=Pos _ _ _ _ 11 transduction transduction NOUN NN Number=Sing _ _ _ _ 12 through through ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 T T PROPN NNP Number=Sing _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 receptor/ receptor/ PUNCT HYPH _ _ _ _ SpaceAfter=No 17 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 18 complex complex NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 LN LN PROPN NNP Number=Sing _ _ _ _ 21 T T PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 ex ex NUM CD NumType=Card _ _ _ _ 25 vivo vivo NOUN NN Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 acquisition acquisition NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 antitumor antitumor NOUN NN Number=Sing _ _ _ _ 33 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6573 # text = Document 003001758 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001758 003001758 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6574 # text = NF-kappa B activation by tumor necrosis factor alpha in the Jurkat T cell line is independent of protein kinase A, protein kinase C, and Ca(2+)-regulated kinases. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 tumor tumor NOUN NN Number=Sing _ _ _ _ 8 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 14 T T PROPN NNP Number=Sing _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 line line NOUN NN Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 independent independent ADJ JJ Degree=Pos _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 kinase kinase NOUN NN Number=Sing _ _ _ _ 22 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 protein protein NOUN NN Number=Sing _ _ _ _ 25 kinase kinase NOUN NN Number=Sing _ _ _ _ 26 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 Ca ca PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 +) +) SYM NFP _ _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6575 # text = NF-kappa B is a DNA-binding regulatory factor able to control transcription of a number of genes, including human immunodeficiency virus (HIV) genes. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 able able ADJ JJ Degree=Pos _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 control control VERB VB VerbForm=Inf _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 number number NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 including include VERB VBG VerbForm=Ger _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 25 virus virus NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 6576 # text = In T cells, NF-kappa B is activated upon cellular treatment by phorbol esters and the cytokine tumor necrosis factor alpha (TNF alpha). 1 In in ADP IN _ _ _ _ _ 2 T t PROPN NNP Number=Sing _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B b PROPN NNP Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 upon upon ADP IN _ _ _ _ _ 12 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 13 treatment treatment NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 16 esters ester NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 20 tumor tumor NOUN NN Number=Sing _ _ _ _ 21 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 TNF Tnf NOUN NN Number=Sing _ _ _ _ 26 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 6577 # text = In the present work, we investigated the molecular events leading to NF-kappa B activation by TNF alpha in a human T cell line (Jurkat) and its subclone JCT6, which presents a deficiency in the PKA transduction pathway. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 work work NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 10 events event NOUN NNS Number=Plur _ _ _ _ 11 leading lead VERB VBG VerbForm=Ger _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 TNF TNF PROPN NNP Number=Sing _ _ _ _ 20 alpha alpha ADV RB _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 T T PROPN NNP Number=Sing _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 line line NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 32 subclone subclone NOUN NN Number=Sing _ _ _ _ 33 JCT6 Jct6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 which which PRON WDT PronType=Rel _ _ _ _ 36 presents present VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 37 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 deficiency deficiency NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 PKA PKA PROPN NNP Number=Sing _ _ _ _ 42 transduction transduction NOUN NN Number=Sing _ _ _ _ 43 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 6578 # text = We found that in both cell lines, both phorbol ester and TNF alpha were able to activate NF-kappa B. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 both both DET DT _ _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 both both CCONJ CC _ _ _ _ _ 10 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 11 ester ester NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 TNF TNF NOUN NN Number=Sing _ _ _ _ 14 alpha alpha NOUN NN Number=Sing _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 able able ADJ JJ Degree=Pos _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 activate activate VERB VB VerbForm=Inf _ _ _ _ 19 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa NOUN NN Number=Sing _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 6579 # text = Phorbol activation was positively modulated by Ca2+ influx while TNF alpha activation was not. 1 Phorbol Phorbol NOUN NN Number=Sing _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 positively positively ADV RB _ _ _ _ _ 5 modulated modulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 + + SYM SYM _ _ _ _ _ 9 influx influx NUM CD NumType=Card _ _ _ _ 10 while while SCONJ IN _ _ _ _ _ 11 TNF TNF NOUN NN Number=Sing _ _ _ _ 12 alpha alpha NOUN NN Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 not not PART RB _ _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 6580 # text = Furthermore, while PMA activation was inhibited by the PKC inhibitor staurosporin, the TNF alpha effect was unchanged. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 while while SCONJ IN _ _ _ _ _ 4 PMA PMA PROPN NNP Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 PKC PKC NOUN NN Number=Sing _ _ _ _ 11 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 12 staurosporin staurosporin NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 TNF TNF PROPN NNP Number=Sing _ _ _ _ 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 effect effect NOUN NN Number=Sing _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 unchanged unchange ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 6581 # text = TNF alpha did not activate cAMP production and its signal was not modulated by cAMP activators. 1 TNF TNF PROPN NNP Number=Sing _ _ _ _ 2 alpha alpha PROPN NNP Number=Sing _ _ _ _ 3 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 activate activate VERB VB VerbForm=Inf _ _ _ _ 6 cAMP camp NOUN NN Number=Sing _ _ _ _ 7 production production NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 10 signal signal NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 modulated modulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 cAMP camp NOUN NN Number=Sing _ _ _ _ 16 activators activator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 6582 # text = Moreover, cAMP activators did not activate NF-kappa B in Jurkat cells. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 cAMP camp NOUN NN Number=Sing _ _ _ _ 4 activators activator NOUN NNS Number=Plur _ _ _ _ 5 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 activate activate VERB VB VerbForm=Inf _ _ _ _ 8 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 6583 # text = Thus, TNF alpha-induced NF-kappa B activation was found to be mediated by none of the major signal-mediating kinases such as protein kinase C (PKC), protein kinase A, or Ca(2+)-regulated kinases. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 TNF TNF PROPN NNP Number=Sing _ _ _ _ 4 alpha- alpha- SYM NFP _ _ _ _ SpaceAfter=No 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 none none NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 major major ADJ JJ Degree=Pos _ _ _ _ 21 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 24 kinases kinase NOUN NNS Number=Plur _ _ _ _ 25 such such ADJ JJ Degree=Pos _ _ _ _ 26 as as ADP IN _ _ _ _ _ 27 protein protein NOUN NN Number=Sing _ _ _ _ 28 kinase kinase NOUN NN Number=Sing _ _ _ _ 29 C C PROPN NNP Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 protein protein NOUN NN Number=Sing _ _ _ _ 35 kinase kinase NOUN NN Number=Sing _ _ _ _ 36 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 or or CCONJ CC _ _ _ _ _ 39 Ca ca PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 +) +) SYM NFP _ _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 6584 # text = Furthermore, we found that cytoplasmic acidification facilitated NF-kappa B activation by both TNF alpha and PKC, by a mechanism that increases NF-kappa B/I kappa B dissociation without affecting the NF-kappa B translocation step. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 7 acidification acidification NOUN NN Number=Sing _ _ _ _ 8 facilitated facilitate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 both both CCONJ CC _ _ _ _ _ 16 TNF TNF PROPN NNP Number=Sing _ _ _ _ 17 alpha alpha PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B/ Bith PUNCT HYPH _ _ _ _ SpaceAfter=No 30 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 31 kappa kappa PROPN NNP Number=Sing _ _ _ _ 32 B b PROPN NNP Number=Sing _ _ _ _ 33 dissociation dissociation NOUN NN Number=Sing _ _ _ _ 34 without without SCONJ IN _ _ _ _ _ 35 affecting affect VERB VBG VerbForm=Ger _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 kappa kappa NOUN NN Number=Sing _ _ _ _ 40 B b NOUN NN Number=Sing _ _ _ _ 41 translocation translocation NOUN NN Number=Sing _ _ _ _ 42 step step NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6585 # text = Document 003001760 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001760 003001760 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6586 # text = Abnormal apoptosis and cell cycle progression in humans exposed to methyl tertiary-butyl ether and benzene contaminating water. 1 Abnormal abnormal ADJ JJ Degree=Pos _ _ _ _ 2 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 cycle cycle NOUN NN Number=Sing _ _ _ _ 6 progression progression NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 humans human NOUN NNS Number=Plur _ _ _ _ 9 exposed expose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 methyl methyl VERB VB VerbForm=Inf _ _ _ _ 12 tertiary tertiary NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 butyl butyl NOUN NN Number=Sing _ _ _ _ 15 ether ether NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 benzene benzene NOUN NN Number=Sing _ _ _ _ 18 contaminating contaminate VERB VBG VerbForm=Ger _ _ _ _ 19 water water NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6587 # text = 1. In this study we hypothesized that in individuals with certain genetic makeup, MTBE, benzene or their metabolites act as adducts and may induce programmed cell death. 1 1 1 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ 3 In in ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 study study NOUN NN Number=Sing _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 hypothesized hypothesize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 individuals individual NOUN NNS Number=Plur _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 certain certain ADJ JJ Degree=Pos _ _ _ _ 13 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 14 makeup makeup NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 MTBE Mtbe PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 benzene benzene PRON PRP _ _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 metabolites metabolite NOUN NN Number=Sing _ _ _ _ 22 act act NOUN NN Number=Sing _ _ _ _ 23 as as ADP IN _ _ _ _ _ 24 adducts adduct NOUN NNS Number=Plur _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 may may AUX MD VerbForm=Fin _ _ _ _ 27 induce induce VERB VB VerbForm=Inf _ _ _ _ 28 programmed programm VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 6588 # text = 2. Our study involved a group of 60 male and female subjects who were exposed to MTBE and benzene-contaminated water concentrations up to 76 PPB for MTBE and 14 PPB for benzene, for a period of 5 to 8 years. 1 2 2 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ 3 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ _ 5 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 group group NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 60 60 NUM CD NumType=Card _ _ _ _ 10 male male NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 female female ADJ JJ Degree=Pos _ _ _ _ 13 subjects subject NOUN NNS Number=Plur _ _ _ _ 14 who who PRON WP PronType=Rel _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 exposed expose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 MTBE Mtbe VERB VB VerbForm=Inf _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 benzene benzene VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 contaminated contaminate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 water water NOUN NN Number=Sing _ _ _ _ 24 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 25 up up ADV RB _ _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 76 76 NUM CD NumType=Card _ _ _ _ 28 PPB Ppb PROPN NNP Number=Sing _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 MTBE MTBE PROPN NNP Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 14 14 NUM CD NumType=Card _ _ _ _ 33 PPB Ppb PROPN NNP Number=Sing _ _ _ _ 34 for for ADP IN _ _ _ _ _ 35 benzene benzene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 period period NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 5 5 NUM CD NumType=Card _ _ _ _ 42 to to ADP IN _ _ _ _ _ 43 8 8 NUM CD NumType=Card _ _ _ _ 44 years year NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 6589 # text = For comparison, we recruited a control group consisting of 32 healthy males and females with similar age distribution and without a history of exposure to MTBE or benzene. 1 For for ADP IN _ _ _ _ _ 2 comparison comparison NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 recruited recruit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 control control NOUN NN Number=Sing _ _ _ _ 8 group group NOUN NN Number=Sing _ _ _ _ 9 consisting consisting VERB VBG VerbForm=Ger _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 32 32 NUM CD NumType=Card _ _ _ _ 12 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 13 males male NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 females female NOUN NNS Number=Plur _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 similar similar ADJ JJ Degree=Pos _ _ _ _ 18 age age NOUN NN Number=Sing _ _ _ _ 19 distribution distribution NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 without without ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 history history NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 exposure exposure NOUN NN Number=Sing _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 MTBE MTBE PROPN NNP Number=Sing _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 benzene benzene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 6590 # text = 3. 1 3 3 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ # sent_id = 6591 # text = Peripheral blood lymphocytes (PBL) of both groups were tested for the percentage of apoptotic cells and cell cycle progression using flow cytometry. 1 Peripheral Peripheral ADJ JJ Degree=Pos _ _ _ _ 2 blood blood NOUN NN Number=Sing _ _ _ _ 3 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 PBL PBL NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 both both DET DT _ _ _ _ _ 9 groups group NOUN NNS Number=Plur _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 tested test VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 percentage percentage NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 cell cell VERB VB VerbForm=Inf _ _ _ _ 20 cycle cycle NOUN NN Number=Sing _ _ _ _ 21 progression progression NOUN NN Number=Sing _ _ _ _ 22 using use VERB VBG VerbForm=Ger _ _ _ _ 23 flow flow ADJ JJ Degree=Pos _ _ _ _ 24 cytometry cytometry NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 6592 # text = 4. When apoptotic lymphocytes from exposed individuals were compared to apoptotic lymphocytes from the control group, statistically-significant differences between each mean group were detected (26.4 +/- 1.8 and 12.1 +/- 1.3, respectively), indicating an increased rate of apoptosis in 80.5% of exposed individuals (P < 0.0001, Mann-Whitney U-Test). 1 4 4 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ 3 When when ADV WRB PronType=Int _ _ _ _ 4 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 5 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 exposed exposed ADJ JJ Degree=Pos _ _ _ _ 8 individuals individual NOUN NNS Number=Plur _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 compared compare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 13 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 control control NOUN NN Number=Sing _ _ _ _ 17 group group NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 statistically statistically ADV RB _ _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 significant significant ADJ JJ Degree=Pos _ _ _ _ 22 differences difference NOUN NNS Number=Plur _ _ _ _ 23 between between ADP IN _ _ _ _ _ 24 each each DET DT _ _ _ _ _ 25 mean mean VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 group group NOUN NN Number=Sing _ _ _ _ 27 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 26.4 26.4 NUM CD NumType=Card _ _ _ _ 31 +/- +/- SYM SYM _ _ _ _ _ 32 1.8 1.8 NUM CD NumType=Card _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 12.1 12.1 NUM CD NumType=Card _ _ _ _ 35 +/- +/- SYM SYM _ _ _ _ _ 36 1.3 1.3 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 42 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 rate rate NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 80.5 80.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 49 % % SYM NN Number=Sing _ _ _ _ 50 of of ADP IN _ _ _ _ _ 51 exposed expose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 52 individuals individual NOUN NNS Number=Plur _ _ _ _ 53 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 54 P p NOUN NN Number=Sing _ _ _ _ 55 < < PUNCT -LRB- _ _ _ _ _ 56 0.0001 0.0001 NUM CD NumType=Card _ _ _ SpaceAfter=No 57 , , PUNCT , _ _ _ _ _ 58 Mann Mann PROPN NNP Number=Sing _ _ _ SpaceAfter=No 59 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 60 Whitney Whitney PROPN NNP Number=Sing _ _ _ _ 61 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 62 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 63 Test Test PROPN NNP Number=Sing _ _ _ SpaceAfter=No 64 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 65 . . PUNCT . _ _ _ _ _ # sent_id = 6593 # text = MTBE and benzene-induced apoptosis is attributed to a discrete block within the cell cycle progression. 1 MTBE Mtbe VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 benzene benzene VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 attributed attribute VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 discrete discrete NOUN NN Number=Sing _ _ _ _ 12 block block NOUN NN Number=Sing _ _ _ _ 13 within within ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 cycle cycle NOUN NN Number=Sing _ _ _ _ 17 progression progression NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 6594 # text = Because cell cycle analysis showed that in PBL from chemically-exposed individuals, between 20-50% of cells were accumulated at the S-G2/M boundaries. 1 Because because SCONJ IN _ _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 cycle cycle NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 PBL PBL PROPN NNP Number=Sing _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 chemically chemically ADV RB _ _ _ _ SpaceAfter=No 11 -exposed -expose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 between between ADP IN _ _ _ _ _ 15 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - SYM SYM _ _ _ _ SpaceAfter=No 17 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 % % SYM NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 accumulated accumulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 at at ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 S- s- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 G2/ G2/ PUNCT HYPH _ _ _ _ SpaceAfter=No 27 M m NOUN NN Number=Sing _ _ _ _ 28 boundaries boundary NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 6595 # text = 5. One of the signaling molecules which mediates programmed cell death is nuclear factor Kappa-B (NF-kappa B). 1 5 5 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ 3 One one NUM CD NumType=Card _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 signaling signaling NOUN NN Number=Sing _ _ _ _ 7 molecules molecule NOUN NNS Number=Plur _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 programmed program VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 death death NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 Kappa Kappa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 B B PROPN NNP Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappa kappa NOUN NN Number=Sing _ _ _ _ 23 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 6596 # text = NF-kappa B was examined as one of the many molecular mechanisms for mediating cell death by MTBE and benzene. 1 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa PROPN NNP Number=Sing _ _ _ _ 4 B b PROPN NNP Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 one one NUM CD NumType=Card _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 many many ADJ JJ Degree=Pos _ _ _ _ 12 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 13 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 14 for for SCONJ IN _ _ _ _ _ 15 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 death death NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 MTBE Mtbe PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 benzene benzene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 6597 # text = Indeed, addition of inhibitors of NF-kappa B activation pyrrolidine dithiocarbamate (PDTC), to the lymphocytes of the chemically-exposed group was capable of inhibiting programmed cell death by 40%. 1 Indeed indeed ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 addition addition NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 pyrrolidine pyrrolidine NOUN NN Number=Sing _ _ _ _ 13 dithiocarbamate dithiocarbamate NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 PDTC PDTC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 chemically chemically ADV RB _ _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 exposed expose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 group group NOUN NN Number=Sing _ _ _ _ 27 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 28 capable capable ADJ JJ Degree=Pos _ _ _ _ 29 of of SCONJ IN _ _ _ _ _ 30 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 31 programmed program VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 death death NOUN NN Number=Sing _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 6598 # text = This reversal of apoptosis almost to the control level by inhibitor of NF-kappa B activation may indicate involvement of this signaling molecule in MTBE and benzene induction of programmed cell death. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 reversal reversal NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 almost almost ADV RB _ _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 control control NOUN NN Number=Sing _ _ _ _ 9 level level NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 may may AUX MD VerbForm=Fin _ _ _ _ 19 indicate indicate VERB VB VerbForm=Inf _ _ _ _ 20 involvement involvement NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 23 signaling signaling NOUN NN Number=Sing _ _ _ _ 24 molecule molecule NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 MTBE MTBE NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 benzene benzene NOUN NN Number=Sing _ _ _ _ 29 induction induction NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 programmed programm VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6599 # text = Document 003001767 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001767 003001767 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6600 # text = Role of EGR1 in regulation of stimulus-dependent CD44 transcription in B lymphocytes. 1 Role role PROPN NNP Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 EGR1 EGR1 PROPN NNP Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 regulation regulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 stimulus stimulus ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 10 CD44 Cd44 NOUN NN Number=Sing _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 B b ADJ JJ Degree=Pos _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6601 # text = The immediate-early gene egr-1 encodes a transcription factor (EGR1) that links B-cell antigen receptor (BCR) signals to downstream activation events through the regulation of previously unidentified target genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 early early ADJ JJ Degree=Pos _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 egr egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 encodes encode NOUN NNS Number=Plur _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 EGR1 EGR1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 links link VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 antigen antigen NOUN NN Number=Sing _ _ _ _ 22 receptor receptor NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 BCR BCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 signals signal NOUN NNS Number=Plur _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ _ 30 events event NOUN NNS Number=Plur _ _ _ _ 31 through through ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 regulation regulation NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 previously previously ADV RB _ _ _ _ _ 36 unidentified unidentified ADJ JJ Degree=Pos _ _ _ _ 37 target target NOUN NN Number=Sing _ _ _ _ 38 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 6602 # text = Here we identify the gene encoding the lymphocyte homing and migration protein CD44 as a target of EGR1 regulation in B cells. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 identify identify VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 9 homing homing NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 migration migration NOUN NN Number=Sing _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 CD44 CD44 NOUN NN Number=Sing _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 target target NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 EGR1 EGR1 NUM CD NumType=Card _ _ _ _ 19 regulation regulation NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 B b ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 6603 # text = BCR-induced increases in CD44 mRNA expression and transcription levels are shown to occur in EGR1-expressing but not in nonexpressing subclones of the B-cell line WEHI-231. 1 BCR Bcr ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 increases increase NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 CD44 CD44 PROPN NNP Number=Sing _ _ _ _ 7 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 occur occur VERB VB VerbForm=Inf _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 EGR1 EGR1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 nonexpressing nonexpresse ADJ JJ Degree=Pos _ _ _ _ 24 subclones subclone NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 line line NOUN NN Number=Sing _ _ _ _ 31 WEHI Wehi NUM CD NumType=Card _ _ _ SpaceAfter=No 32 - - SYM SYM _ _ _ _ SpaceAfter=No 33 231 231 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 6604 # text = Kinetics of egr-1 transcription and the appearance of nuclear EGR1 protein precede CD44 induction and occur within 30 min after stimulation in the EGR1-expressing subclone. 1 Kinetics Kinetic NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 egr egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 -1 -1 NUM CD NumType=Card _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 appearance appearance NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 EGR1 EGR1 NUM CD NumType=Card _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 precede precede NOUN NN Number=Sing _ _ _ _ 14 CD44 Cd44 NUM CD NumType=Card _ _ _ _ 15 induction induction NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 occur occur VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 within within ADP IN _ _ _ _ _ 19 30 30 NUM CD NumType=Card _ _ _ _ 20 min min NOUN NNS Number=Plur _ _ _ _ 21 after after ADP IN _ _ _ _ _ 22 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 EGR1 Egr1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 expressing expressing ADJ JJ Degree=Pos _ _ _ _ 28 subclone subclone NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 6605 # text = A single EGR1 binding motif is demonstrated at bp -301 of the human CD44 promoter. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 single single ADJ JJ Degree=Pos _ _ _ _ 3 EGR1 Egr1 NOUN NN Number=Sing _ _ _ _ 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 motif motif NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 at at ADP IN _ _ _ _ _ 9 bp bp NOUN NN Number=Sing _ _ _ _ 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 301 301 NUM CD NumType=Card _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 CD44 Cd44 NOUN NN Number=Sing _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 6606 # text = Cotransfection of a CD44 promoter-chloramphenicol acetyltransferase reporter construct with an egr-1 expression vector resulted in a 6.5- to 8.5-fold induction of transcriptional activity relative to an empty expression vector. 1 Cotransfection Cotransfection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 CD44 CD44 NUM CD NumType=Card _ _ _ _ 5 promoter-chloramphenicol promoter-chloramphenicol ADJ JJ Degree=Pos _ _ _ _ 6 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 7 reporter reporter NOUN NN Number=Sing _ _ _ _ 8 construct construct NOUN NN Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 egr egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 vector vector NOUN NN Number=Sing _ _ _ _ 16 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 6.5 6.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 8.5 8.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 fold fold NOUN NN Number=Sing _ _ _ _ 25 induction induction NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ _ 29 relative relative ADV RB _ _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 empty empty ADJ JJ Degree=Pos _ _ _ _ 33 expression expression NOUN NN Number=Sing _ _ _ _ 34 vector vector NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 6607 # text = The EGR1 binding motif was shown to be necessary for stimulus-induced expression of a CD44 promoter-chloramphenicol acetyltransferase reporter construct in nontransformed B lymphocytes and was required for transactivation by an EGR1 expression vector in a B-cell line. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 EGR1 EGR1 NOUN NN Number=Sing _ _ _ _ 3 binding binding VERB VBG VerbForm=Ger _ _ _ _ 4 motif motif NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 stimulus stimulus ADV RB _ _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 CD44 CD44 PROPN NNP Number=Sing _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 21 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 22 reporter reporter NOUN NN Number=Sing _ _ _ _ 23 construct construct NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 nontransformed nontransformed VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 EGR1 EGR1 NUM CD NumType=Card _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ _ 37 vector vector NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 cell cell NOUN NN Number=Sing _ _ _ _ 43 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 6608 # text = These studies identify EGR1 as an intermediary linking BCR-derived signals to the induction of CD44. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 identify identify VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 EGR1 EGR1 NUM CD NumType=Card _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 intermediary intermediary ADJ JJ Degree=Pos _ _ _ _ 8 linking link NOUN NN Number=Sing _ _ _ _ 9 BCR BCR ADV RBR Degree=Cmp _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 signals signal NOUN NNS Number=Plur _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 induction induction NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 CD44 CD44 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 6609 # text = The relevance of these molecular events to BCR signal transduction and antigen-stimulated B-cell-mediated immune responses is discussed. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 relevance relevance NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 6 events event NOUN NNS Number=Plur _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 BCR Bcr VERB VB VerbForm=Inf _ _ _ _ 9 signal signal NOUN NN Number=Sing _ _ _ _ 10 transduction transduction NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 antigen- antigen- SYM NFP _ _ _ _ SpaceAfter=No 13 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 B- B- SYM NFP _ _ _ _ SpaceAfter=No 15 cell cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 immune immune PRON PRP _ _ _ _ _ 19 responses response NOUN NNS Number=Plur _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 discussed discuss VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6610 # text = Document 003001772 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001772 003001772 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6611 # text = Differential monocyte adhesion and adhesion molecule expression in venous and arterial endothelial cells. 1 Differential differential ADJ JJ Degree=Pos _ _ _ _ 2 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 3 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 6 molecule molecule NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 venous venous ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 arterial arterial ADJ JJ Degree=Pos _ _ _ _ 12 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6612 # text = We compared U-937 cell adhesion and adhesion molecule expression in human umbilical venous (HUVECs) and arterial (HUAECs) endothelial cells exposed to tumor necrosis factor (TNF), interleukin-1, and lipopolysaccharide (LPS). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 compared compare VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 937 937 NUM CD NumType=Card _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 10 molecule molecule NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 15 venous venous NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 arterial arterial NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 HUAECs Huaecs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 exposed expose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 tumor tumor NOUN NN Number=Sing _ _ _ _ 29 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 6613 # text = TNF and LPS stimulated vascular cell adhesion molecule (VCAM)-1 surface expression and adhesion of U-937 monocyte-like cells to HUVECs but not to HUAECs. 1 TNF TNF PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 LPS LPS PROPN NNP Number=Sing _ _ _ _ 4 stimulated stimulate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 8 molecule molecule NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 surface surface NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 937 937 NUM CD NumType=Card _ _ _ _ 22 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 like like ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 HUVECs HUVEC PROPN NNPS Number=Plur _ _ _ _ 28 but but CCONJ CC _ _ _ _ _ 29 not not ADV RB _ _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 HUAECs Huaecs PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 6614 # text = Antibody studies demonstrated that in HUVECs at least 75% of the adhesion response is VCAM-1 mediated. 1 Antibody Antibody ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 HUVECs Huvecs PROPN NNPS Number=Plur _ _ _ _ 7 at at ADV RB _ _ _ _ _ 8 least least ADV RBS Degree=Sup _ _ _ _ 9 75 75 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 % % SYM NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 14 response response NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 mediated mediate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 6615 # text = Interleukin-1 stimulated U-937 cell adhesion to and VCAM-1 surface expression in both HUVECs and HUAECs. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 937 937 NUM CD NumType=Card _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 VCAM VCAm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 surface surface NOUN NN Number=Sing _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 both both DET DT _ _ _ _ _ 19 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 HUAECs HUAEC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 6616 # text = Pyrrolidinedithiocarbamate and the proteasome inhibitor MG-132 blocked TNF- and LPS-stimulated U-937 cell adhesion to HUVECs. 1 Pyrrolidinedithiocarbamate Pyrrolidinedithiocarbamate PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 proteasome proteasome ADJ JJ Degree=Pos _ _ _ _ 5 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 6 MG Mg NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 132 132 NUM CD NumType=Card _ _ _ _ 9 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 TNF Tnf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 LPS Lps PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 937 937 NUM CD NumType=Card _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 6617 # text = These agents also significantly decreased TNF- and LPS-stimulated increases in HUVEC surface VCAM-1. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 agents agent NOUN NNS Number=Plur _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 significantly significantly ADV RB _ _ _ _ _ 5 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 LPS Lps PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 increases increase NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 HUVEC Huvec PROPN NNP Number=Sing _ _ _ _ 15 surface surface NOUN NN Number=Sing _ _ _ _ 16 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 6618 # text = TNF increased VCAM-1 protein and mRNA in HUVECs that was blocked by pyrrolidinedithiocarbamate. 1 TNF TNF AUX VB VerbForm=Inf _ _ _ _ 2 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 VCAM VCAM NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 pyrrolidinedithiocarbamate pyrrolidinedithiocarbamate NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 6619 # text = However, neither TNF or LPS stimulated VCAM-1 expression in HUAECs. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 neither neither CCONJ CC _ _ _ _ _ 4 TNF TNF PROPN NNP Number=Sing _ _ _ _ 5 or or CCONJ CC _ _ _ _ _ 6 LPS LPS PROPN NNP Number=Sing _ _ _ _ 7 stimulated stimulate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 HUAECs HUAEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 6620 # text = TNF stimulated expression of both intercellular adhesion molecule-1 and E-selectin in HUVECs, but in HUAECs, only intercellular adhesion molecule-1 was increased. 1 TNF Tnf PRON PRP Case=Acc|Number=Sing|Person=1|PronType=Prs|Reflex=Yes _ _ _ _ 2 stimulated stimulate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 both both DET DT _ _ _ _ _ 6 intercellular intercellular ADJ JJ Degree=Pos _ _ _ _ 7 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 8 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 E- E- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 selectin selectin NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 HUVECs HUVEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 HUAECs Huaecs PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 only only ADV RB _ _ _ _ _ 22 intercellular intercellular ADJ JJ Degree=Pos _ _ _ _ 23 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 24 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 28 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 6621 # text = Electrophoretic mobility shift assays demonstrated no difference in the pattern of TNF-stimulated nuclear factor-kappaB activation between HUVECs and HUAECs. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 assays assays NOUN NNS Number=Plur _ _ _ _ 5 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 no no DET DT _ _ _ _ _ 7 difference difference NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 pattern pattern NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappab NOUN NN Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 between between ADP IN _ _ _ _ _ 21 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 HUAECs HUAEC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 6622 # text = These studies demonstrate a novel and striking insensitivity of arterial endothelium to the effects of TNF and LPS and indicate a dissociation between the ability of HUAECs to upregulate nuclear factor-kappaB and VCAM-1. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 novel novel NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 striking strik VERB VBG VerbForm=Ger _ _ _ _ 8 insensitivity insensitivity NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 arterial arterial ADJ JJ Degree=Pos _ _ _ _ 11 endothelium endothelium NOUN NN Number=Sing _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 effects effect NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 TNF TNF PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 LPS LPS PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 indicate indicate VERB VB VerbForm=Inf _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 dissociation dissociation NOUN NN Number=Sing _ _ _ _ 23 between between ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 ability ability NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 HUAECs HUAEC NOUN NNS Number=Plur _ _ _ _ 28 to to PART TO _ _ _ _ _ 29 upregulate upregulate VERB VB VerbForm=Inf _ _ _ _ 30 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 31 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappaB kappab NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6623 # text = Document 003001780 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001780 003001780 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6624 # text = Surfactant suppresses NF-kappa B activation in human monocytic cells. 1 Surfactant Surfactant PROPN NNP Number=Sing _ _ _ _ 2 suppresses suppress VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6625 # text = In addition to biophysical properties, pulmonary surfactant has immunomodulatory activity. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 biophysical biophysical ADJ JJ Degree=Pos _ _ _ _ 5 properties property NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 pulmonary pulmonary ADJ JJ Degree=Pos _ _ _ _ 8 surfactant surfactant NOUN NN Number=Sing _ _ _ _ 9 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 immunomodulatory immunomodulatory ADJ JJ Degree=Pos _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 6626 # text = We previously demonstrated that both synthetic (Exosurf) and modified natural surfactant (Survanta) downregulated endotoxin-stimulated inflammatory cytokine mRNA levels and protein products (tumor necrosis factor-alpha [TNF], interleukin-1-beta [IL-1], interleukin-6 [IL-6]) in human alveolar macrophages. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 previously previously ADV RB _ _ _ _ _ 3 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 both both DET DT _ _ _ _ _ 6 synthetic synthetic NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 Exosurf Exosurf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 modified modify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 natural natural ADJ JJ Degree=Pos _ _ _ _ 13 surfactant surfactant NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 Survanta Survanta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 downregulated downregulate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 endotoxin- endotoxin- PUNCT : _ _ _ _ SpaceAfter=No 19 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 21 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 22 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 23 levels level NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ _ 26 products product NOUN NNS Number=Plur _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 tumor tumor NOUN NN Number=Sing _ _ _ _ 29 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 alpha alpha NOUN NN Number=Sing _ _ _ _ 33 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 beta beta NOUN NN Number=Sing _ _ _ _ 42 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 46 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 interleukin interleukin ADV RB _ _ _ _ SpaceAfter=No 49 - - SYM SYM _ _ _ _ SpaceAfter=No 50 6 6 NUM CD NumType=Card _ _ _ _ 51 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 52 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 54 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 55 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 56 ) ) PUNCT -RRB- _ _ _ _ _ 57 in in ADP IN _ _ _ _ _ 58 human human ADJ JJ Degree=Pos _ _ _ _ 59 alveolar alveolar ADJ JJ Degree=Pos _ _ _ _ 60 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ _ # sent_id = 6627 # text = In this study, we report that both Exosurf and Survanta suppress TNF mRNA and secretion (85 +/- 4% mean percent inhibition +/- SEM by Exosurf; 71 +/- 6% by Survanta) by endotoxin-stimulated THP-1, a human monocytic cell line. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 8 both both CCONJ CC _ _ _ _ _ 9 Exosurf Exosurf PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 Survanta Survanta PROPN NNP Number=Sing _ _ _ _ 12 suppress suppress PROPN NNP Number=Sing _ _ _ _ 13 TNF TNF PROPN NNP Number=Sing _ _ _ _ 14 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 secretion secretion NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 85 85 NUM CD NumType=Card _ _ _ _ 19 +/- +/- SYM SYM _ _ _ _ _ 20 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 % % SYM NN Number=Sing _ _ _ _ 22 mean mean VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 percent percent ADJ JJ Degree=Pos _ _ _ _ 24 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 25 +/- +/- SYM NFP _ _ _ _ _ 26 SEM SEM PROPN NNP Number=Sing _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 Exosurf Exosurf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ; ; PUNCT , _ _ _ _ _ 30 71 71 NUM CD NumType=Card _ _ _ _ 31 +/- +/- SYM SYM _ _ _ _ _ 32 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 % % SYM NN Number=Sing _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 Survanta Survanta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 by by ADP IN _ _ _ _ _ 38 endotoxin- endotoxin- SYM SYM _ _ _ _ SpaceAfter=No 39 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 45 human human ADJ JJ Degree=Pos _ _ _ _ 46 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 47 cell cell NOUN NN Number=Sing _ _ _ _ 48 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 6628 # text = Because surfactant downregulated inflammatory cytokine production similarly in both normal human alveolar macrophages and the THP-1 cell line, we used this cell line to investigate whether surfactant affected transcriptional mechanisms. 1 Because because SCONJ IN _ _ _ _ _ 2 surfactant surfactant ADV RB _ _ _ _ _ 3 downregulated downregulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 5 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 6 production production NOUN NN Number=Sing _ _ _ _ 7 similarly similarly ADV RB _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 both both DET DT _ _ _ _ _ 10 normal normal ADJ JJ Degree=Pos _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 alveolar alveolar NOUN NN Number=Sing _ _ _ _ 13 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 23 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 line line NOUN NN Number=Sing _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 29 whether whether SCONJ IN _ _ _ _ _ 30 surfactant surfactant ADV RB _ _ _ _ _ 31 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 33 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 6629 # text = Specifically, we examined nuclear factor-kappa B (NF-kappa B) activation because it is crucial in transcriptional regulation of many inflammatory cytokine genes including TNF, IL-1, and IL-6. 1 Specifically specifically ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 because because SCONJ IN _ _ _ _ _ 18 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 23 regulation regulation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 many many ADJ JJ Degree=Pos _ _ _ _ 26 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 27 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 28 genes gene NOUN NNS Number=Plur _ _ _ _ 29 including include VERB VBG VerbForm=Ger _ _ _ _ 30 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - SYM SYM _ _ _ _ SpaceAfter=No 39 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 6630 # text = Electrophoretic mobility shift assays showed that both surfactants decreased activation of NF-kappa B. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assays assays NOUN NNS Number=Plur _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 both both DET DT _ _ _ _ _ 8 surfactants surfactant NOUN NNS Number=Plur _ _ _ _ 9 decreased decrease VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa PROPN NNP Number=Sing _ _ _ _ 15 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 6631 # text = The presence of both p65 and p50 NF-kappa B components in LPS-activated THP-1 cells was confirmed by specific antibody induction of supershifts in mobility assays. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 presence presence NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 both both CCONJ CC _ _ _ _ _ 5 p65 p65 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 p50 p50 NUM CD NumType=Card _ _ _ _ 8 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 components component NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 confirmed confirm VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 antibody antibody ADJ JJ Degree=Pos _ _ _ _ 26 induction induction NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 supershifts supershift NOUN NNS Number=Plur _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 mobility mobility NOUN NN Number=Sing _ _ _ _ 31 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 6632 # text = These results are the first to suggest that surfactant's suppressive effects on inflammatory cytokine production may involve transcriptional regulation through inhibition of NF-kappa B activation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 8 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 9 surfactant surfactant NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 's 's PART POS _ _ _ _ _ 11 suppressive suppressive ADJ JJ Degree=Pos _ _ _ _ 12 effects effect NOUN NNS Number=Plur _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 15 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 16 production production NOUN NN Number=Sing _ _ _ _ 17 may may AUX MD VerbForm=Fin _ _ _ _ 18 involve involve VERB VB VerbForm=Inf _ _ _ _ 19 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 20 regulation regulation NOUN NN Number=Sing _ _ _ _ 21 through through ADP IN _ _ _ _ _ 22 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa NOUN NN Number=Sing _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6633 # text = Document 003001782 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001782 003001782 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6634 # text = The regulation of the human tumor necrosis factor alpha promoter region in macrophage, T cell, and B cell lines. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 tumor tumor NOUN NN Number=Sing _ _ _ _ 7 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 alpha alpha ADP IN _ _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 region region NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 macrophage macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 B b ADJ JJ Degree=Pos _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6635 # text = The 1311-base pair human tumor necrosis factor (TNF) alpha promoter region was fused to the luciferase (Luc) reporter gene and studied in a transient transfection system in three TNF producing cell lines, the U937 macrophage cell line, the MLA 144 T cell line, and the 729-6 B cell line. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 1311 1311 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 base base NOUN NN Number=Sing _ _ _ _ 5 pair pair NOUN NN Number=Sing _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 tumor tumor NOUN NN Number=Sing _ _ _ _ 8 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 alpha alpha X FW Foreign=Yes _ _ _ _ 14 promoter promoter X GW _ _ _ _ _ 15 region region NOUN NN Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 fused fuse VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 Luc Luc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 reporter reporter NOUN NN Number=Sing _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 studied studie VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 transient transient ADJ JJ Degree=Pos _ _ _ _ 31 transfection transfection NOUN NN Number=Sing _ _ _ _ 32 system system NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 three three NUM CD NumType=Card _ _ _ _ 35 TNF Tnf SCONJ IN _ _ _ _ _ 36 producing produce VERB VBG VerbForm=Ger _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 U937 U937 NOUN NN Number=Sing _ _ _ _ 42 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 43 cell cell NOUN NN Number=Sing _ _ _ _ 44 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 MLA MLA PROPN NNP Number=Sing _ _ _ _ 48 144 144 NUM CD NumType=Card _ _ _ _ 49 T t PROPN NNP Number=Sing _ _ _ _ 50 cell cell NOUN NN Number=Sing _ _ _ _ 51 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 and and CCONJ CC _ _ _ _ _ 54 the the DET DT Definite=Def|PronType=Art _ _ _ _ 55 729-6 729-6 NUM CD NumType=Card _ _ _ _ 56 B b NOUN NN Number=Sing _ _ _ _ 57 cell cell NOUN NN Number=Sing _ _ _ _ 58 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 6636 # text = This full length promoter construct can be induced by phorbol 13-myristate acetate (PMA) in each of these cell types. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 full full ADJ JJ Degree=Pos _ _ _ _ 3 length length NOUN NN Number=Sing _ _ _ _ 4 promoter promoter NOUN NN Number=Sing _ _ _ _ 5 construct construct NOUN NN Number=Sing _ _ _ _ 6 can can AUX MD VerbForm=Fin _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 11 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 myristate myristate NOUN NN Number=Sing _ _ _ _ 14 acetate acetate NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 each each DET DT _ _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 6637 # text = Analysis of a series of 5'-truncations showed several peaks of basal and PMA induced activity suggesting the presence of several positive and negative regulatory elements. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 series series NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ' ' NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 - - PUNCT : _ _ _ _ SpaceAfter=No 9 truncations truncation NOUN NNS Number=Plur _ _ _ _ 10 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 several several ADJ JJ Degree=Pos _ _ _ _ 12 peaks peak NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 basal basal NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 PMA PMA DET DT Definite=Ind|PronType=Art _ _ _ _ 17 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 presence presence NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 several several ADJ JJ Degree=Pos _ _ _ _ 24 positive positive ADJ JJ Degree=Pos _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 negative negative ADJ JJ Degree=Pos _ _ _ _ 27 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 28 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 6638 # text = A PMA responsive element was localized to a region between -95 and -36 bp relative to the transcription start site. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 PMA PMA PROPN NNP Number=Sing _ _ _ _ 3 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 4 element element NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 localized localize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 region region NOUN NN Number=Sing _ _ _ _ 10 between between ADP IN _ _ _ _ _ 11 -95 -95 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 - - SYM SYM _ _ _ _ SpaceAfter=No 14 36 36 NUM CD NumType=Card _ _ _ _ 15 bp bp NOUN NN Number=Sing _ _ _ _ 16 relative relative ADV RB _ _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 start start NOUN NN Number=Sing _ _ _ _ 21 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 6639 # text = Within this region, single AP-2- and AP-1- like consensus sequences were noted. 1 Within within ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 single single ADJ JJ Degree=Pos _ _ _ _ 6 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ _ 15 like like ADJ JJ Degree=Pos _ _ _ _ 16 consensus consensus NOUN NN Number=Sing _ _ _ _ 17 sequences sequence NOUN NNS Number=Plur _ _ _ _ 18 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 noted note VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 6640 # text = These AP-2 and AP-1 sites were each modified with a double point mutation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 sites site NOUN NNS Number=Plur _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 each each DET DT _ _ _ _ _ 12 modified modify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 double double ADJ JJ Degree=Pos _ _ _ _ 16 point point NOUN NN Number=Sing _ _ _ _ 17 mutation mutation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 6641 # text = A modest (20-50%) reduction in TNF promoter activity was observed with the AP-2 site mutation. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 modest modest NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 reduction reduction NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 TNF TNF PROPN NNP Number=Sing _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 site site NOUN NN Number=Sing _ _ _ _ 22 mutation mutation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 6642 # text = However, mutation of the AP-1 site markedly diminished both the basal and PMA-activated promoter activity. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 mutation mutation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 site site NOUN NN Number=Sing _ _ _ _ 10 markedly markedly ADV RB _ _ _ _ _ 11 diminished diminish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 both both CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 basal basal NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 PMA Pma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 promoter promoter ADJ JJ Degree=Pos _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 6643 # text = Also co-transfections of the wild-type promoter construct with an AP-1/c-jun expression vector resulted in augmented basal and PMA-induced promoter activity. 1 Also also ADV RB _ _ _ _ _ 2 co-transfections co-transfection NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 type type NOUN NN Number=Sing _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 construct construct NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1/ 1ith PUNCT HYPH _ _ _ _ SpaceAfter=No 15 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 jun jun NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 vector vector NOUN NN Number=Sing _ _ _ _ 20 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 augmented augmented ADJ JJ Degree=Pos _ _ _ _ 23 basal basal NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 PMA Pma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ _ 29 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6644 # text = Document 003001787 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001787 003001787 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6645 # text = Specific complex formation between the type II bare lymphocyte syndrome-associated transactivators CIITA and RFX5. 1 Specific specific ADJ JJ Degree=Pos _ _ _ _ 2 complex complex ADJ JJ Degree=Pos _ _ _ _ 3 formation formation NOUN NN Number=Sing _ _ _ _ 4 between between ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 type type NOUN NN Number=Sing _ _ _ _ 7 II ii NUM CD NumType=Card _ _ _ _ 8 bare bear ADJ JJ Degree=Pos _ _ _ _ 9 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 10 syndrome syndrome NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 transactivators transactivator NOUN NNS Number=Plur _ _ _ _ 14 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 RFX5 RFX5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6646 # text = Two of the genes defective in the five complementation groups identified in the class II-negative bare lymphocyte syndrome or corresponding laboratory mutants have been cloned. 1 Two two NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 genes gene NOUN NNS Number=Plur _ _ _ _ 5 defective defective ADJ JJ Degree=Pos _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 five five NUM CD NumType=Card _ _ _ _ 9 complementation complementation NOUN NN Number=Sing _ _ _ _ 10 groups group NOUN NNS Number=Plur _ _ _ _ 11 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 class class NOUN NN Number=Sing _ _ _ _ 15 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 negative negative ADJ JJ Degree=Pos _ _ _ _ 18 bare bare ADJ JJ Degree=Pos _ _ _ _ 19 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 20 syndrome syndrome NOUN NN Number=Sing _ _ _ _ 21 or or CCONJ CC _ _ _ _ _ 22 corresponding corresponding VERB VBG VerbForm=Ger _ _ _ _ 23 laboratory laboratory NOUN NN Number=Sing _ _ _ _ 24 mutants mutant NOUN NNS Number=Plur _ _ _ _ 25 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 27 cloned clon VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 6647 # text = One gene encodes a protein, RFX5, that is a member of the RFX family of DNA binding proteins. 1 One one NUM CD NumType=Card _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 RFX5 RFX5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 member member NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 RFX RFX PROPN NNP Number=Sing _ _ _ _ 16 family family NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 DNA dna NOUN NN Number=Sing _ _ _ _ 19 binding binding VERB VBG VerbForm=Ger _ _ _ _ 20 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 6648 # text = The other, CIITA, encodes a large protein with a defined acidic transcriptional activation domain; this protein does not interact with DNA. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 other other ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 large large ADJ JJ Degree=Pos _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 defined define VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 acidic acidic ADJ JJ Degree=Pos _ _ _ _ 14 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ; ; PUNCT , _ _ _ _ _ 18 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 interact interact VERB VB VerbForm=Inf _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 6649 # text = Expression plasmids encoding regions of RFX5 fused to the GAL4 DNA binding domain activated transcription from a reporter construct containing GAL4 sites in a cotransfection assay in the Raji human B cell line. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 3 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 4 regions region NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 RFX5 RFX5 PROPN NNP Number=Sing _ _ _ _ 7 fused fuse VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 GAL4 GAL4 PROPN NNP Number=Sing _ _ _ _ 11 DNA dna NOUN NN Number=Sing _ _ _ _ 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 domain domain NOUN NN Number=Sing _ _ _ _ 14 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 from from ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 reporter reporter NOUN NN Number=Sing _ _ _ _ 19 construct construct NOUN NN Number=Sing _ _ _ _ 20 containing contain VERB VBG VerbForm=Ger _ _ _ _ 21 GAL4 GAL4 NUM CD NumType=Card _ _ _ _ 22 sites site NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 cotransfection cotransfection NOUN NN Number=Sing _ _ _ _ 26 assay assay NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 Raji Raji PROPN NNP Number=Sing _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 B b NOUN NN Number=Sing _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 6650 # text = However, these plasmids produced transcriptional activity in HeLa cells only in conjunction with interferon gamma stimulation, a condition in which expression of both CIITA and class II major histocompatibility complex surface proteins are induced. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 5 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 only only ADV RB _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 conjunction conjunction NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 interferon interferon NOUN NN Number=Sing _ _ _ _ 16 gamma gamma NOUN NN Number=Sing _ _ _ _ 17 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 condition condition NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 both both CCONJ CC _ _ _ _ _ 26 CIITA CIITA NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 class class NOUN NN Number=Sing _ _ _ _ 29 II ii NUM CD NumType=Card _ _ _ _ 30 major major ADJ JJ Degree=Pos _ _ _ _ 31 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 32 complex complex SYM SYM _ _ _ _ _ 33 surface surface NOUN NN Number=Sing _ _ _ _ 34 proteins protein NOUN NNS Number=Plur _ _ _ _ 35 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 36 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 6651 # text = Furthermore, these plasmids were not active in RJ2.2.5, an in vitro mutagenized derivative of Raji in which both copies of CIITA are defective. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 active active ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 RJ RJ PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 2.2.5 2.2.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 15 mutagenized mutagenized VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 derivative derivative NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 Raji Raji PROPN NNP Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 which which PRON WDT PronType=Rel _ _ _ _ 21 both both DET DT _ _ _ _ _ 22 copies copy NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 CIITA CIITA NOUN NN Number=Sing _ _ _ _ 25 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 defective defective ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 6652 # text = Transcriptional activation by the RFX5 fusion protein could be restored in RJ2.2.5 by cotransfection with a CIITA expression plasmid. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 RFX5 RFX5 PROPN NNP Number=Sing _ _ _ _ 6 fusion fusion NOUN NN Number=Sing _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 could could AUX MD VerbForm=Fin _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 restored restore VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 RJ2.2.5 RJ2.2.5 NUM CD NumType=Card _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 cotransfection cotransfection NOUN NN Number=Sing _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 CIITA CIITa NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 plasmid plasmid NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 6653 # text = Finally, a direct interaction between RFX5 and CIITA was detected with the yeast two-hybrid and far-Western blot assays. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 direct direct ADJ JJ Degree=Pos _ _ _ _ 5 interaction interaction NOUN NN Number=Sing _ _ _ _ 6 between between ADP IN _ _ _ _ _ 7 RFX5 RFX5 PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 yeast yeast ADJ JJS Degree=Sup _ _ _ _ 15 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 hybrid hybrid NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 far far ADV RB Degree=Pos _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 Western western ADJ JJ Degree=Pos _ _ _ _ 22 blot blot NOUN NN Number=Sing _ _ _ _ 23 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 6654 # text = Thus, RFX5 can activate transcription only in cooperation with CIITA. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 RFX5 RFX5 PROPN NNP Number=Sing _ _ _ _ 4 can can AUX MD VerbForm=Fin _ _ _ _ 5 activate activate VERB VB VerbForm=Inf _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 only only ADV RB _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 cooperation cooperation NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 6655 # text = RFX5 and CIITA associate to form a complex capable of activating transcription from class II major histocompatibility complex promoters. 1 RFX5 RFX5 PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 4 associate associate VERB VB VerbForm=Inf _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 form form VERB VB VerbForm=Inf _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 complex complex NOUN NN Number=Sing _ _ _ _ 9 capable capable ADJ JJ Degree=Pos _ _ _ _ 10 of of SCONJ IN _ _ _ _ _ 11 activating activate VERB VBG VerbForm=Ger _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 class class NOUN NN Number=Sing _ _ _ _ 15 II ii NUM CD NumType=Card _ _ _ _ 16 major major ADJ JJ Degree=Pos _ _ _ _ 17 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 18 complex complex NOUN NN Number=Sing _ _ _ _ 19 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 6656 # text = In this complex, promoter specificity is determined by the DNA binding domain of RFX5 and the general transcription apparatus is recruited by the acidic activation domain of CIITA. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ _ 6 specificity specificity NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 DNA dna NOUN NN Number=Sing _ _ _ _ 12 binding binde VERB VBG VerbForm=Ger _ _ _ _ 13 domain domain NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 RFX5 RFX5 PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 general general ADJ JJ Degree=Pos _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 apparatus apparatus NOUN NN Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 recruited recruit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 acidic acidic ADJ JJ Degree=Pos _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 domain domain NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6657 # text = Document 003001792 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001792 003001792 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6658 # text = Redox status of cells influences constitutive or induced NF-kappa B translocation and HIV long terminal repeat activity in human T and monocytic cell lines. 1 Redox Redox NOUN NN Number=Sing _ _ _ _ 2 status status NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 influences influence NOUN NNS Number=Plur _ _ _ _ 6 constitutive constitutive VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 translocation translocation NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 HIV haHive AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 long long ADV RB Degree=Pos _ _ _ _ 17 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 18 repeat repeat ADJ JJ Degree=Pos _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 T T PROPN NNP Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6659 # text = We have tested the hypothesis that cellular activation events occurring in T lymphocytes and monocytes and mediated through translocation of the transcription factor NF-kappa B are dependent upon the constitutive redox status of these cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 events event NOUN NNS Number=Plur _ _ _ _ 10 occurring occurre VERB VBG VerbForm=Ger _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 T T PROPN NNP Number=Sing _ _ _ _ 13 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 through through ADP IN _ _ _ _ _ 19 translocation translocation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ _ 24 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa NOUN NN Number=Sing _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ _ 28 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 30 upon upon ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 33 redox redox NOUN NN Number=Sing _ _ _ _ 34 status status NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 6660 # text = We used phenolic, lipid-soluble, chain-breaking antioxidants (butylated hydroxyanisole (BHA), nordihydroquairetic acid, or alpha-tocopherol (vitamin E) to show that peroxyl radical scavenging in unstimulated and PMA- or TNF-stimulated cells blocks the functions depending on NF-kappa B activation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 phenolic phenolic NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 lipid lipid NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 soluble soluble NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 chain chain NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 breaking breaking NOUN NN Number=Sing _ _ _ _ 12 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 butylated butylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 hydroxyanisole hydroxyanisole NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 BHA BHA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 nordihydroquairetic nordihydroquairetic ADJ JJ Degree=Pos _ _ _ _ 21 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 tocopherol tocopherol NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 vitamin vitamin ADJ JJ Degree=Pos _ _ _ _ 29 E e NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 show show VERB VB VerbForm=Inf _ _ _ _ 33 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 34 peroxyl peroxyl NOUN NN Number=Sing _ _ _ _ 35 radical radical ADJ JJ Degree=Pos _ _ _ _ 36 scavenging scavenging VERB VBG VerbForm=Ger _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT , _ _ _ _ _ 42 or or CCONJ CC _ _ _ _ _ 43 TNF Tnf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 cells cell NOUN NNS Number=Plur _ _ _ _ 47 blocks block NOUN NNS Number=Plur _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 functions function NOUN NNS Number=Plur _ _ _ _ 50 depending depend VERB VBG VerbForm=Ger _ _ _ _ 51 on on ADP IN _ _ _ _ _ 52 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 54 kappa kappa NOUN NN Number=Sing _ _ _ _ 55 B b NOUN NN Number=Sing _ _ _ _ 56 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 6661 # text = BHA was found to suppress not only PMA- or TNF-induced, but also constitutive, HIV-enhancer activity concomitant to an inhibition of NF-kappa B binding activity in both lymphoblastoid T (J.Jhan) and monocytic (U937) cell lines. 1 BHA BHa PROPN NNP Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 6 not not ADV RB _ _ _ _ _ 7 only only ADV RB _ _ _ _ _ 8 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 also also ADV RB _ _ _ _ _ 17 constitutive constitutive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 concomitant concomitant NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappa kappa PROPN NNP Number=Sing _ _ _ _ 31 B b PROPN NNP Number=Sing _ _ _ _ 32 binding binde VERB VBG VerbForm=Ger _ _ _ _ 33 activity activity NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 both both DET DT _ _ _ _ _ 36 lymphoblastoid lymphoblastoid NOUN NN Number=Sing _ _ _ _ 37 T T PROPN NNP Number=Sing _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 J.Jhan J.Jhan PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 monocytic monocytic NOUN NN Number=Sing _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 U937 U937 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ _ 46 cell cell NOUN NN Number=Sing _ _ _ _ 47 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 6662 # text = This was also true for KBF (p50 homodimer) binding activity in U937 cells. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 true true ADJ JJ Degree=Pos _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 KBF KBF PROPN NNP Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 p50 p50 NUM CD NumType=Card _ _ _ _ 9 homodimer homodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 U937 U937 NUM CD NumType=Card _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 6663 # text = Secretion of TNF, the product of another NF-kappa B-dependent gene, was abolished by BHA in PMA-stimulated U937 cells. 1 Secretion Secretion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 product product NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 another another DET DT _ _ _ _ _ 9 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 abolished abolish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 BHA BHA PROPN NNP Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 U937 U937 NUM CD NumType=Card _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 6664 # text = The anti-oxidative effect of BHA was accompanied by an increase in thiol, but not glutathione, content in stimulated and unstimulated T cell, whereas TNF stimulation itself barely modified the cellular thiol level. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 anti-oxidative anti-oxidative ADJ JJ Degree=Pos _ _ _ _ 3 effect effect NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 BHA BHA PROPN NNP Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 increase increase NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 thiol thiol NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 not not ADV RB _ _ _ _ _ 16 glutathione glutathione ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 content content ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 unstimulated unstimulate ADJ JJ Degree=Pos _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 whereas whereas SCONJ IN _ _ _ _ _ 27 TNF TNF PROPN NNP Number=Sing _ _ _ _ 28 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 29 itself itself PRON PRP Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 30 barely barely ADV RB _ _ _ _ _ 31 modified modify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 34 thiol thiol NOUN NN Number=Sing _ _ _ _ 35 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 6665 # text = Oxidative stress obtained by the addition of H2O2 to the culture medium of J.Jhan or U937 cells could not by itself induce NF-kappa B activation. 1 Oxidative Oxidative ADJ JJ Degree=Pos _ _ _ _ 2 stress stress NOUN NN Number=Sing _ _ _ _ 3 obtained obtain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 addition addition NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 H2O2 H2O2 NUM CD NumType=Card _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 culture culture NOUN NN Number=Sing _ _ _ _ 12 medium medium NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 J.Jhan J.Jhan PROPN NNP Number=Sing _ _ _ _ 15 or or CCONJ CC _ _ _ _ _ 16 U937 U937 NUM CD NumType=Card _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 could could AUX MD VerbForm=Fin _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 itself itself PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs|Reflex=Yes _ _ _ _ 22 induce induce ADJ JJ Degree=Pos _ _ _ _ 23 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 6666 # text = These observations suggest that TNF and PMA do not lead to NF-kappa B activation through induction of changes in the cell redox status. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 TNF TNF PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 PMA PMA PROPN NNP Number=Sing _ _ _ _ 8 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 lead lead VERB VB VerbForm=Inf _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 through through ADP IN _ _ _ _ _ 18 induction induction NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 changes change NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 redox redox NOUN NN Number=Sing _ _ _ _ 25 status status NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 6667 # text = Rather, TNF and PMA can exert their effect only if cells are in an appropriate redox status, because prior modification toward reduction with BHA treatment prevents this activation. 1 Rather Rather PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 TNF TNF PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 PMA PMA PROPN NNP Number=Sing _ _ _ _ 6 can can AUX MD VerbForm=Fin _ _ _ _ 7 exert exert VERB VB VerbForm=Inf _ _ _ _ 8 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 9 effect effect NOUN NN Number=Sing _ _ _ _ 10 only only ADV RB _ _ _ _ _ 11 if if SCONJ IN _ _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 appropriate appropriate ADJ JJ Degree=Pos _ _ _ _ 17 redox redox NOUN NN Number=Sing _ _ _ _ 18 status status NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 because because SCONJ IN _ _ _ _ _ 21 prior prior ADJ JJ Degree=Pos _ _ _ _ 22 modification modification NOUN NN Number=Sing _ _ _ _ 23 toward toward ADP IN _ _ _ _ _ 24 reduction reduction NOUN NN Number=Sing _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 BHA BHA PROPN NNP Number=Sing _ _ _ _ 27 treatment treatment NOUN NN Number=Sing _ _ _ _ 28 prevents prevent NOUN NNS Number=Plur _ _ _ _ 29 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 6668 # text = It appears that a basal redox equilibrium tending toward oxidation is a prerequisite for full activation of transduction pathways regulating the activity of NF-kappa B-dependent genes. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 basal basal ADJ JJ Degree=Pos _ _ _ _ 6 redox redox NOUN NN Number=Sing _ _ _ _ 7 equilibrium equilibrium NOUN NN Number=Sing _ _ _ _ 8 tending tend VERB VBG VerbForm=Ger _ _ _ _ 9 toward toward ADP IN _ _ _ _ _ 10 oxidation oxidation NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 prerequisite prerequisite NOUN NN Number=Sing _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 full full ADJ JJ Degree=Pos _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 transduction transduction NOUN NN Number=Sing _ _ _ _ 19 pathways pathway NOUN NNS Number=Plur _ _ _ _ 20 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa PROPN NNP Number=Sing _ _ _ _ 27 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 30 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6669 # text = Document 003001795 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001795 003001795 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6670 # text = Constitutive expression of p50 homodimer in freshly isolated human monocytes decreases with in vitro and in vivo differentiation: 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p50 p50 NUM CD NumType=Card _ _ _ _ 5 homodimer homodimer NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 freshly freshly ADV RB _ _ _ _ _ 8 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 11 decreases decrease VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 vitro vitro NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 vivo vivo NOUN NN Number=Sing _ _ _ _ 18 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 : : PUNCT : _ _ _ _ _ # sent_id = 6671 # text = a possible mechanism influencing human immunodeficiency virus replication in monocytes and mature macrophages. 1 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 possible possible ADJ JJ Degree=Pos _ _ _ _ 3 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 4 influencing influence VERB VBG VerbForm=Ger _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 7 virus virus NOUN NN Number=Sing _ _ _ _ 8 replication replication NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 mature mature ADJ JJ Degree=Pos _ _ _ _ 13 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6672 # text = Human immunodeficiency virus type 1 (HIV-1) replicates more efficiently in vitro in differentiated macrophages than in freshly isolated monocytes. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 3 virus virus NOUN NN Number=Sing _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ _ 5 1 1 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 replicates replicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 more more ADV RBR _ _ _ _ _ 13 efficiently efficiently ADV RB _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 vitro vitro NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 differentiated differentiated ADJ JJ Degree=Pos _ _ _ _ 18 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 19 than than ADP IN _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 freshly freshly ADV RB _ _ _ _ _ 22 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 6673 # text = We investigated whether this may be partly explained by changes in expression of NF-kappaB with monocyte differentiation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 may may AUX MD VerbForm=Fin _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 partly partly ADV RB _ _ _ _ _ 8 explained explain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 changes change NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 19 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 6674 # text = We demonstrated that constitutive expression of NF-kappaB in primary human monocytes changed significantly with differentiation in vitro to monocyte-derived macrophages (MDMs) and differentiation in vivo to alveolar macrophages (AMs). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 primary primary ADJ JJ Degree=Pos _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 14 changed change VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 significantly significantly ADV RB _ _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 vitro vitro NOUN NN Number=Sing _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 monocyte monocyte VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 MDMs MDM NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 vivo vivo NOUN NN Number=Sing _ _ _ _ 32 to to PART TO _ _ _ _ _ 33 alveolar alveolar VERB VB VerbForm=Inf _ _ _ _ 34 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 AMs am NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 6675 # text = Freshly isolated monocytes constitutively expressed high levels of transcriptionally inactive p50 homodimer which decreased with time in culture in favor of the transcriptionally active p50/p65 and p50/RelB heterodimers. 1 Freshly freshly ADV RB _ _ _ _ _ 2 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 4 constitutively constitutively ADV RB _ _ _ _ _ 5 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 high high ADJ JJ Degree=Pos _ _ _ _ 7 levels level NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 transcriptionally transcriptionally ADV RB _ _ _ _ _ 10 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 11 p50 p50 NOUN NN Number=Sing _ _ _ _ 12 homodimer homodimer NOUN NN Number=Sing _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 decreased decrease VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 time time NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 culture culture NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 favor favor NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 transcriptionally transcriptionally ADV RB _ _ _ _ _ 24 active active ADJ JJ Degree=Pos _ _ _ _ 25 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 / / PUNCT , _ _ _ _ SpaceAfter=No 27 p65 p65 NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 p50/ p50ith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 30 RelB RelB NOUN NN Number=Sing _ _ _ _ 31 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 6676 # text = As in MDMs, AMs constitutively expressed p50/p65 and p50/RelB although at lower levels. 1 As as ADP IN _ _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 MDMs Mdms PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 AMs AMs PROPN NNPS Number=Plur _ _ _ _ 6 constitutively constitutively ADV RB _ _ _ _ _ 7 expressed expressed VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 10 p65 p65 NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 p50/ p50ith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 13 RelB RelB PROPN NNP Number=Sing _ _ _ _ 14 although although SCONJ IN _ _ _ _ _ 15 at at ADP IN _ _ _ _ _ 16 lower lower ADJ JJR Degree=Cmp _ _ _ _ 17 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 6677 # text = HIV infection of fresh monocytes failed to induce p50/p65 as seen in MDMs. 1 HIV haHive NOUN NN Number=Sing _ _ _ _ 2 infection infection NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 fresh fresh ADJ JJ Degree=Pos _ _ _ _ 5 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 6 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 induce induce VERB VB VerbForm=Inf _ _ _ _ 9 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 p65 p65 NOUN NN Number=Sing _ _ _ _ 12 as as SCONJ IN _ _ _ _ _ 13 seen see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 MDMs Mdms PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 6678 # text = The replacement of p50 homodimers with transcriptionally active heterodimers following time in culture may partially explain the progressive increase in susceptibility of monocytes to HIV infection during in vitro culture. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 replacement replacement NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p50 p50 NUM CD NumType=Card _ _ _ _ 5 homodimers homodimer NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 transcriptionally transcriptionally ADV RB _ _ _ _ _ 8 active active ADJ JJ Degree=Pos _ _ _ _ 9 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 10 following follow VERB VBG VerbForm=Ger _ _ _ _ 11 time time NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 culture culture NOUN NN Number=Sing _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 partially partially ADV RB _ _ _ _ _ 16 explain explain VERB VB VerbForm=Inf _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 progressive progressive ADJ JJ Degree=Pos _ _ _ _ 19 increase increase NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 susceptibility susceptibility NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 HIV HIV PROPN NNP Number=Sing _ _ _ _ 26 infection infection NOUN NN Number=Sing _ _ _ _ 27 during during ADP IN _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 vitro vitro NOUN NN Number=Sing _ _ _ _ 30 culture culture NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 6679 # text = The change in NF-kappaB components with monocyte differentiation in vivo may also explain the different transcriptional activities of these cell populations in HIV-infected individuals. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 change change NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 components component NOUN NNS Number=Plur _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 10 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 vivo vivo NOUN NN Number=Sing _ _ _ _ 13 may may AUX MD VerbForm=Fin _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 explain explain VERB VB VerbForm=Inf _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 different different ADJ JJ Degree=Pos _ _ _ _ 18 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 19 activities activity NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 populations population NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 HIV- HIV- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6680 # text = Document 003001801 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001801 003001801 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6681 # text = A regulatory element in the human interleukin 2 gene promoter is a binding site for the zinc finger proteins Sp1 and EGR-1. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 3 element element NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 8 2 2 NUM CD NumType=Card _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 binding binding VERB VBG VerbForm=Ger _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 zinc zinc NOUN NN Number=Sing _ _ _ _ 18 finger finger NOUN NN Number=Sing _ _ _ _ 19 proteins protein NOUN NNS Number=Plur _ _ _ _ 20 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 EGR EGR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6682 # text = Activation of the interleukin 2 (IL-2) gene after antigen recognition is a critical event for T cell proliferation and effector function. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 5 2 2 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 after after ADP IN _ _ _ _ _ 13 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 14 recognition recognition NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 critical critical ADJ JJ Degree=Pos _ _ _ _ 18 event event NOUN NN Number=Sing _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 effector effector NOUN NN Number=Sing _ _ _ _ 25 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 6683 # text = Prior studies have identified several transcription factors that contribute to the activity of the IL-2 promoter in stimulated T lymphocytes. 1 Prior prior ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 several several ADJ JJ Degree=Pos _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factors factor NOUN NNS Number=Plur _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 contribute contribute VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 6684 # text = Here we describe a novel regulatory element within the IL-2 promoter located immediately upstream of the nuclear factor of activated T cell (NFAT) domain. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 describe describe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 novel novel NOUN NN Number=Sing _ _ _ _ 6 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 7 element element NOUN NN Number=Sing _ _ _ _ 8 within within ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 immediately immediately ADV RB _ _ _ _ _ 16 upstream upstream NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 T T PROPN NNP Number=Sing _ _ _ _ 24 cell cell PROPN NNP Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 6685 # text = This region (termed the zinc finger protein binding region (ZIP)) serves as binding site for two differently regulated zinc finger proteins: the constitutively expressed transcription factor Sp1 and the inducible early growth response protein EGR-1. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 region region NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 zinc zinc NOUN NN Number=Sing _ _ _ _ 7 finger finger NOUN NN Number=Sing _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 region region NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 ZIP ZIP NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 serves serve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 as as SCONJ IN _ _ _ _ _ 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 two two NUM CD NumType=Card _ _ _ _ 21 differently differently ADV RB _ _ _ _ _ 22 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 zinc zinc NOUN NN Number=Sing _ _ _ _ 24 finger finger NOUN NN Number=Sing _ _ _ _ 25 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 : : PUNCT : _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 constitutively constitutively ADV RB _ _ _ _ _ 29 expressed expressed VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ _ 31 factor factor NOUN NN Number=Sing _ _ _ _ 32 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 36 early early ADJ JJ Degree=Pos _ _ _ _ 37 growth growth NOUN NN Number=Sing _ _ _ _ 38 response response NOUN NN Number=Sing _ _ _ _ 39 protein protein NOUN NN Number=Sing _ _ _ _ 40 EGR EGR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 6686 # text = In unstimulated cells which do not secrete IL-2, only Sp1 binds to this region, while in stimulated IL-2 secreting cells the inducible EGR-1 protein recognizes this element. 1 In in ADP IN _ _ _ _ _ 2 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 secrete secrete VERB VB VerbForm=Inf _ _ _ _ 8 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 only only ADV RB _ _ _ _ _ 13 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 14 binds bind NOUN NNS Number=Plur _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 17 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 while while SCONJ IN _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 secreting secreting NOUN NN Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 29 EGR Egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 protein protein NOUN NN Number=Sing _ _ _ _ 33 recognizes recognize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 35 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 6687 # text = In Jurkat T cells, the ZIP site serves as an activator for IL-2 gene expression, and a combination of ZIP and NFAT binding sites is required for maximal IL-2 promoter activity. 1 In in ADP IN _ _ _ _ _ 2 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 ZIP ZIP PROPN NNP Number=Sing _ _ _ _ 8 site site NOUN NN Number=Sing _ _ _ _ 9 serves serve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 activator activator NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 combination combination NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 ZIP ZIP PROPN NNP Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 NFAT Nfat SCONJ IN _ _ _ _ _ 27 binding binding VERB VBG VerbForm=Ger _ _ _ _ 28 sites site NOUN NNS Number=Plur _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 33 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 2 2 NUM CD NumType=Card _ _ _ _ 36 promoter promoter NOUN NN Number=Sing _ _ _ _ 37 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 6688 # text = These results suggest a critical role of the ZIP site for IL-2 promoter activity. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 critical critical ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 ZIP ZIP PROPN NNP Number=Sing _ _ _ _ 10 site site NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6689 # text = Document 003001809 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001809 003001809 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6690 # text = Involvement of Alu sequences in the cell-specific regulation of transcription of the gamma chain of Fc and T cell receptors. 1 Involvement involvement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Alu Alu PROPN NNP Number=Sing _ _ _ _ 4 sequences sequence NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 regulation regulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 gamma gamma NOUN NN Number=Sing _ _ _ _ 16 chain chain NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 Fc Fc PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6691 # text = The Fc epsilon RI-gamma chains are expressed in a variety of hematopoietic cells where they play a critical role in signal transduction. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Fc Fc PROPN NNP Number=Sing _ _ _ _ 3 epsilon epsilon ADP IN _ _ _ _ _ 4 RI RI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 gamma gamma NOUN NN Number=Sing _ _ _ _ 7 chains chain NOUN NNS Number=Plur _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 variety variety NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 where where ADV WRB PronType=Rel _ _ _ _ 17 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 18 play play VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 critical critical ADJ JJ Degree=Pos _ _ _ _ 21 role role NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 signal signal ADJ JJ Degree=Pos _ _ _ _ 24 transduction transduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 6692 # text = They are part of the high affinity 1 They they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 part part NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 high high ADJ JJ Degree=Pos _ _ _ _ 7 affinity affinity NOUN NN Number=Sing _ _ _ _ # sent_id = 6693 # text = IgE receptor in mast cells, basophils, Langerhans cells, and possibly other cells; a component of the low affinity receptor for IgG (Fc gamma RIIIA or CD16) in natural killer cells and macrophages; and part of the T cell antigen receptor in subsets of T cells. 1 IgE Ige ADJ JJ Degree=Pos _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 mast mast ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 basophils basophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 Langerhans Langerhans VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 possibly possibly ADV RB _ _ _ _ _ 14 other other ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 ; ; PUNCT , _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 component component NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 low low ADJ JJ Degree=Pos _ _ _ _ 22 affinity affinity NOUN NN Number=Sing _ _ _ _ 23 receptor receptor NOUN NN Number=Sing _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 IgG IgG PROPN NNP Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 Fc Fc PROPN NNP Number=Sing _ _ _ _ 28 gamma gamma PROPN NNP Number=Sing _ _ _ _ 29 RIIIA RIIIA PROPN NNP Number=Sing _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 CD16 CD16 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 natural natural ADJ JJ Degree=Pos _ _ _ _ 35 killer killer NOUN NN Number=Sing _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 ; ; PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 part part NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 T T PROPN NNP Number=Sing _ _ _ _ 45 cell cell NOUN NN Number=Sing _ _ _ _ 46 antigen antigen NUM CD NumType=Card _ _ _ _ 47 receptor receptor NOUN NN Number=Sing _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 subsets subset NOUN NNS Number=Plur _ _ _ _ 50 of of ADP IN _ _ _ _ _ 51 T t PROPN NNP Number=Sing _ _ _ _ 52 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 6694 # text = Here we have investigated the transcriptional regulation of the gamma chain gene by analyzing the 2.5-kilobase sequence upstream of the transcription start site. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 regulation regulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 gamma gamma NOUN NN Number=Sing _ _ _ _ 11 chain chain NOUN NN Number=Sing _ _ _ _ 12 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by SCONJ IN _ _ _ _ _ 14 analyzing analyze VERB VBG VerbForm=Ger _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 2.5 2.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kilobase kilobase NOUN NN Number=Sing _ _ _ _ 19 sequence sequence NOUN NN Number=Sing _ _ _ _ 20 upstream upstream NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 start start NOUN NN Number=Sing _ _ _ _ 25 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 6695 # text = This sequence contains a promoter specific to cells of hematopoietic lineage. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 sequence sequence NOUN NN Number=Sing _ _ _ _ 3 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ _ 6 specific specific ADJ JJ Degree=Pos _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 11 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 6696 # text = However, the tissue specificity of this promoter is only partial because it is active in all of the hematopoietic cells tested here, regardless of whether they constitutively express Fc epsilon RI- gamma chain transcripts. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 tissue tissue ADJ JJ Degree=Pos _ _ _ _ 5 specificity specificity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 only only ADV RB _ _ _ _ _ 11 partial partial ADJ JJ Degree=Pos _ _ _ _ 12 because because SCONJ IN _ _ _ _ _ 13 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 active active ADJ JJ Degree=Pos _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 all all DET DT _ _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 regardless regardless ADV RB _ _ _ _ _ 26 of of SCONJ IN _ _ _ _ _ 27 whether whether SCONJ IN _ _ _ _ _ 28 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 29 constitutively constitutively VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 express express ADJ JJ Degree=Pos _ _ _ _ 31 Fc Fc PROPN NNP Number=Sing _ _ _ _ 32 epsilon epsilon ADP IN _ _ _ _ _ 33 RI Ri PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ _ 35 gamma gamma NOUN NN Number=Sing _ _ _ _ 36 chain chain NOUN NN Number=Sing _ _ _ _ 37 transcripts transcript NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 6697 # text = We have identified two adjacent cis-acting regulatory elements, both of which are part of an Alu repeat. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 6 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 -acting -act VERB VBG VerbForm=Ger _ _ _ _ 8 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 9 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 both both DET DT _ _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 part part NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 Alu Alu PROPN NNP Number=Sing _ _ _ _ 19 repeat repeat NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 6698 # text = The first (-445/-366) is a positive element active in both basophils and T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 -445/- -445/- SYM SYM _ _ _ _ SpaceAfter=No 5 366 366 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 positive positive ADJ JJ Degree=Pos _ _ _ _ 10 element element NOUN NN Number=Sing _ _ _ _ 11 active active ADJ JJ Degree=Pos _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 both both DET DT _ _ _ _ _ 14 basophils basophil NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 T t ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 6699 # text = The second (-365/-264) binds to nuclear factors, which appear to be different in basophils and T cells, and acts as a negative element in basophils and as a positive one in T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 -365/- -365/- SYM SYM _ _ _ _ SpaceAfter=No 5 264 264 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 binds bind NOUN NNS Number=Plur _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 appear appear VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 different different ADJ JJ Degree=Pos _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 basophils basophil NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 T t NOUN NN Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 as as ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 negative negative ADJ JJ Degree=Pos _ _ _ _ 28 element element NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 basophils basophil NOUN NNS Number=Plur _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 as as ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 positive positive ADJ JJ Degree=Pos _ _ _ _ 35 one one NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 T t PROPN NNP Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 6700 # text = Thus, this Alu repeat (90% identical to Alu consensus sequences) has evolved to become both a positive and negative regulator. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 Alu Alu PROPN NNP Number=Sing _ _ _ _ 5 repeat repeat NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 90 90 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 % % SYM NN Number=Sing _ _ _ _ 9 identical identical ADJ JJ Degree=Pos _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 Alu Alu PROPN NNP Number=Sing _ _ _ _ 12 consensus consensus NOUN NN Number=Sing _ _ _ _ 13 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 evolved evolve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 become become VERB VB VerbForm=Inf _ _ _ _ 19 both both CCONJ CC _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 positive positive ADJ JJ Degree=Pos _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 negative negative ADJ JJ Degree=Pos _ _ _ _ 24 regulator regulator NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6701 # text = Document 003001811 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001811 003001811 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6702 # text = Differential autoregulation of glucocorticoid receptor expression in human T- and B-cell lines. 1 Differential differential ADJ JJ Degree=Pos _ _ _ _ 2 autoregulation autoregulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 T T PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6703 # text = Regulation of glucocorticoid receptor (GR) expression by its cognate ligand was examined in the glucocorticoid-sensitive human leukemic T-cell line 6TG1.1 and in the human B-cell line IM-9. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 GR GR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 11 cognate cognate ADJ JJ Degree=Pos _ _ _ _ 12 ligand ligand NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 leukemic leukemic NOUN NN Number=Sing _ _ _ _ 22 T- T- PUNCT , _ _ _ _ SpaceAfter=No 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 line line NOUN NN Number=Sing _ _ _ _ 25 6TG1.1 6tg1.1 NUM CD NumType=Card _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 line line NOUN NN Number=Sing _ _ _ _ 34 IM Im NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 6704 # text = In contrast to the decrease in GR mRNA seen in IM-9 cells after treatment with 1 microM dexamethasone for 16-18 h, treatment of 6TG1.1 cells resulted in an 8-fold increase in GR mRNA, as determined by Northern blot and RNase protection analysis, with a corresponding 3- to 4-fold increase in GR protein. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 decrease decrease NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 GR Gr PROPN NNP Number=Sing _ _ _ _ 8 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 9 seen see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 IM Im PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 9 9 NUM CD NumType=Card _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 after after ADP IN _ _ _ _ _ 16 treatment treatment NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 1 1 NUM CD NumType=Card _ _ _ _ 19 microM microm NOUN NN Number=Sing _ _ _ _ 20 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 16 16 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - SYM SYM _ _ _ _ SpaceAfter=No 24 18 18 NUM CD NumType=Card _ _ _ _ 25 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 treatment treatment NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 6TG1.1 6TG1.1 NUM CD NumType=Card _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 8 8 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 fold fold NOUN NN Number=Sing _ _ _ _ 37 increase increase NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 GR GR PROPN NNP Number=Sing _ _ _ _ 40 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 as as SCONJ IN _ _ _ _ _ 43 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 by by ADP IN _ _ _ _ _ 45 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 46 blot blot NOUN NN Number=Sing _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 RNase RNase NOUN NN Number=Sing _ _ _ _ 49 protection protection NOUN NN Number=Sing _ _ _ _ 50 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 , , PUNCT , _ _ _ _ _ 52 with with ADP IN _ _ _ _ _ 53 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 54 corresponding corresponding NOUN NN Number=Sing _ _ _ _ 55 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 56 - - PUNCT , _ _ _ _ _ 57 to to ADP IN _ _ _ _ _ 58 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 59 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 60 fold fold NOUN NN Number=Sing _ _ _ _ 61 increase increase NOUN NN Number=Sing _ _ _ _ 62 in in ADP IN _ _ _ _ _ 63 GR Gr ADJ JJ Degree=Pos _ _ _ _ 64 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 65 . . PUNCT . _ _ _ _ _ # sent_id = 6705 # text = Half-maximal induction of GR mRNA and protein in 6TG1.1 cells was observed between 10-100 nM dexamethasone, and inclusion of 1 microM RU 38486 completely blocked the effects of 100 nM dexamethasone, demonstrating that positive autoregulation of GR expression in 6TG1.1 cells is a receptor-mediated response. 1 Half half NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 4 induction induction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 GR GR PROPN NNP Number=Sing _ _ _ _ 7 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 6TG1.1 6TG1.1 NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 between between ADP IN _ _ _ _ _ 16 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - SYM SYM _ _ _ _ SpaceAfter=No 18 100 100 NUM CD NumType=Card _ _ _ _ 19 nM nm NUM CD NumType=Card _ _ _ _ 20 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 inclusion inclusion NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 1 1 NUM CD NumType=Card _ _ _ _ 26 microM microm PROPN NNP Number=Sing _ _ _ _ 27 RU RU PROPN NNP Number=Sing _ _ _ _ 28 38486 38486 NUM CD NumType=Card _ _ _ _ 29 completely completely ADV RB _ _ _ _ _ 30 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 effects effect NOUN NNS Number=Plur _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 100 100 NUM CD NumType=Card _ _ _ _ 35 nM nm NOUN NN Number=Sing _ _ _ _ 36 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 demonstrating demonstrat VERB VBG VerbForm=Ger _ _ _ _ 39 that that SCONJ IN _ _ _ _ _ 40 positive positive ADJ JJ Degree=Pos _ _ _ _ 41 autoregulation autoregulation NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 GR Gr PROPN NNP Number=Sing _ _ _ _ 44 expression expression NOUN NN Number=Sing _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 6TG1.1 6TG1.1 NUM CD NumType=Card _ _ _ _ 47 cells cell NOUN NNS Number=Plur _ _ _ _ 48 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 49 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 50 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 53 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 6706 # text = Positive autoregulation of GR expression was also observed in glucocorticoid-resistant CEM-C1 cells, which contain functional GR, but whose growth is unaffected by glucocorticoids. 1 Positive positive ADJ JJ Degree=Pos _ _ _ _ 2 autoregulation autoregulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 GR Gr ADJ JJ Degree=Pos _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 resistant resistant NOUN NN Number=Sing _ _ _ _ 13 CEM cem PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 C1 c1 NUM CD NumType=Card _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 functional functional ADJ JJ Degree=Pos _ _ _ _ 21 GR GR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 but but CCONJ CC _ _ _ _ _ 24 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 25 growth growth NOUN NN Number=Sing _ _ _ _ 26 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 unaffected unaffect ADJ JJ Degree=Pos _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 6707 # text = Thus, positive autoregulation is neither a consequence nor the sole cause of growth arrest. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 positive positive ADJ JJ Degree=Pos _ _ _ _ 4 autoregulation autoregulation NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 neither neither DET DT _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 consequence consequence NOUN NN Number=Sing _ _ _ _ 9 nor nor CCONJ CC _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 sole sole ADJ JJ Degree=Pos _ _ _ _ 12 cause cause NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 growth growth NOUN NN Number=Sing _ _ _ _ 15 arrest arrest NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 6708 # text = The degree of negative autoregulation in IM-9 cells and positive autoregulation in 6TG1.1 cells was unaffected by inhibition of protein synthesis with cycloheximide. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 degree degree NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 negative negative ADJ JJ Degree=Pos _ _ _ _ 5 autoregulation autoregulation NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 IM Im PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 9 9 NUM CD NumType=Card _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 positive positive ADJ JJ Degree=Pos _ _ _ _ 13 autoregulation autoregulation NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 6TG1.1 6TG1.1 NUM CD NumType=Card _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 unaffected unaffect ADJ JJ Degree=Pos _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 6709 # text = Measurement of GR mRNA turnover in 6TG1.1 cells treated with actinomycin-D revealed a half-life of 2.5 h, which was unaffected by dexamethasone treatment. 1 Measurement Measurement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 GR GR PROPN NNP Number=Sing _ _ _ _ 4 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 5 turnover turnover NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 6TG1.1 6TG1.1 NUM CD NumType=Card _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 actinomycin actinomycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 D d PROPN NNP Number=Sing _ _ _ _ 14 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 half half NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 life life NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 2.5 2.5 NUM CD NumType=Card _ _ _ _ 21 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 unaffected unaffect ADJ JJ Degree=Pos _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 dexamethasone dexamethasone ADJ JJ Degree=Pos _ _ _ _ 28 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 6710 # text = A similar half-life was determined in IM-9 cells and was also unaffected by steroid treatment. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 similar similar ADJ JJ Degree=Pos _ _ _ _ 3 half half NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 life life NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 IM Im PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 9 9 NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 also also ADV RB _ _ _ _ _ 16 unaffected unaffect ADJ JJ Degree=Pos _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 steroid steroid ADJ JJ Degree=Pos _ _ _ _ 19 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 6711 # text = These results are consistent with the interpretation that glucocorticoid-mediated autoregulation of GR expression is a tissue-specific primary transcriptional response. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 interpretation interpretation NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 glucocorticoid glucocorticoid VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 mediated mediated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 autoregulation autoregulation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 GR Gr NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 tissue-specific tissue-specific ADJ JJ Degree=Pos _ _ _ _ 19 primary primary ADJ JJ Degree=Pos _ _ _ _ 20 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 21 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6712 # text = Document 003001815 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001815 003001815 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6713 # text = Fcgamma receptor-mediated mitogen-activated protein kinase activation in monocytes is independent of Ras. 1 Fcgamma Fcgamma PROPN NNP Number=Sing _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 kinase kinase NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 independent independent ADJ JJ Degree=Pos _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 Ras Ras PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6714 # text = Receptors for the Fc portion of immunoglobulin molecules (FcR) present on leukocyte cell membranes mediate a large number of cellular responses that are very important in host defense, including phagocytosis, cell cytotoxicity, production and secretion of inflammatory mediators, and modulation of the immune response. 1 Receptors Receptor NOUN NNS Number=Plur _ _ _ _ 2 for for ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 Fc Fc ADJ JJ Degree=Pos _ _ _ _ 5 portion portion NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 8 molecules molecule NOUN NNS Number=Plur _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 FcR FcR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 present present ADJ JJ Degree=Pos _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 leukocyte leukocyte ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 membranes membrane NOUN NNS Number=Plur _ _ _ _ 17 mediate mediate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 large large ADJ JJ Degree=Pos _ _ _ _ 20 number number NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 23 responses respons NOUN NNS Number=Plur _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 very very ADV RB _ _ _ _ _ 27 important important ADJ JJ Degree=Pos _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 host host NOUN NN Number=Sing _ _ _ _ 30 defense defense NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 including include VERB VBG VerbForm=Ger _ _ _ _ 33 phagocytosis phagocytosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ _ 36 cytotoxicity cytotoxicity NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 production production NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 secretion secretion NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 43 mediators mediator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 modulation modulation NOUN NN Number=Sing _ _ _ _ 47 of of ADP IN _ _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 immune immune ADJ JJ Degree=Pos _ _ _ _ 50 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 6715 # text = Cross-linking of FcR with immune complexes leads, first to activation of protein-tyrosine kinases. 1 Cross cross ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 linking linking NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 FcR FcR PROPN NNP Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 immune immune ADJ JJ Degree=Pos _ _ _ _ 8 complexes complexe NOUN NNS Number=Plur _ _ _ _ 9 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 first first ADV RB _ _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 18 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 6716 # text = The molecular events that follow and that transduce signals from these receptors to the nucleus are still poorly defined. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 3 events event NOUN NNS Number=Plur _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 follow follow VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 transduce transduce NOUN NN Number=Sing _ _ _ _ 9 signals signal NOUN NNS Number=Plur _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 12 receptors receptor NOUN NNS Number=Plur _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 still still ADV RB _ _ _ _ _ 18 poorly poorly ADV RB _ _ _ _ _ 19 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 6717 # text = We have investigated the signal transduction pathway from Fc receptors that leads to gene activation and production of cytokines in monocytes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 signal signal NOUN NN Number=Sing _ _ _ _ 6 transduction transduction NOUN NN Number=Sing _ _ _ _ 7 pathway pathway NOUN NN Number=Sing _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 Fc Fc ADJ JJ Degree=Pos _ _ _ _ 10 receptors receptor NOUN NNS Number=Plur _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 gene gene VERB VB VerbForm=Inf _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 production production NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 6718 # text = Cross-linking of FcR, on the THP-1 monocytic cell line, by immune complexes resulted in both activation of the transcription factor NF-kappaB and interleukin 1 production. 1 Cross cross ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 linking linking NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 FcR FcR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 immune immune ADJ JJ Degree=Pos _ _ _ _ 18 complexes complexe NOUN NNS Number=Plur _ _ _ _ 19 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 both both DET DT _ _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 interleukin interleukin ADJ JJ Degree=Pos _ _ _ _ 32 1 1 NUM CD NumType=Card _ _ _ _ 33 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 6719 # text = These responses were completely blocked by tyrosine kinase inhibitors. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 responses response NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 completely completely ADV RB _ _ _ _ _ 5 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 8 kinase kinase NOUN NN Number=Sing _ _ _ _ 9 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 6720 # text = In contrast, expression of dominant negative mutants of Ras and Raf-1, in these cells, did not have any effect on FcR-mediated nuclear factor activation, suggesting that the mitogen-activated protein kinase (MAPK) signaling pathway was not used by these receptors. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 7 negative negative ADJ JJ Degree=Pos _ _ _ _ 8 mutants mutant NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 Ras Ras PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 have have VERB VB VerbForm=Inf _ _ _ _ 23 any any DET DT _ _ _ _ _ 24 effect effect NOUN NN Number=Sing _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 FcR-mediated FcR-mediated ADJ JJ Degree=Pos _ _ _ _ 27 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 28 factor factor NOUN NN Number=Sing _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 32 that that SCONJ IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 mitogen mitogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 protein protein NOUN NN Number=Sing _ _ _ _ 38 kinase kinase NOUN NN Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 MAPK MAPK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 signaling signale NOUN NN Number=Sing _ _ _ _ 43 pathway pathway NOUN NN Number=Sing _ _ _ _ 44 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 45 not not PART RB _ _ _ _ _ 46 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 47 by by ADP IN _ _ _ _ _ 48 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 49 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 6721 # text = However, MAPK activation was easily detected by in vitro kinase assays, after FcR cross-linking with immune complexes. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 MAPK MAPK PROPN NNP Number=Sing _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 easily easily ADV RB _ _ _ _ _ 7 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 vitro vitro NUM CD NumType=Card _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 assays assays NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 after after ADP IN _ _ _ _ _ 15 FcR Fcr NOUN NN Number=Sing _ _ _ _ 16 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 immune immune ADJ JJ Degree=Pos _ _ _ _ 20 complexes complexe NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 6722 # text = Using the specific MAPK/extracellular signal-regulated kinase kinase (MAPK kinase) inhibitor PD98059, we found that MAPK activation is necessary for FcR-dependent activation of the nuclear factor NF-kappaB. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 specific specific ADJ JJ Degree=Pos _ _ _ _ 4 MAPK MAPK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 7 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 kinase kinase NOUN NN Number=Sing _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 MAPK MAPK NUM CD NumType=Card _ _ _ _ 14 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 17 PD98059 Pd98059 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 20 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 MAPK MAPK PROPN NNP Number=Sing _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 FcR-dependent FcR-dependent ADJ JJ Degree=Pos _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 32 factor factor NOUN NN Number=Sing _ _ _ _ 33 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 6723 # text = These results strongly suggest that the signaling pathway from Fc receptors leading to expression of different genes important to leukocyte biology, initiates with tyrosine kinases and requires MAPK activation; but in contrast to other tyrosine kinase receptors, FcR-mediated MAPK activation does not involve Ras and Raf. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 strongly strongly ADV RB _ _ _ _ _ 4 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 signaling signaling NOUN NN Number=Sing _ _ _ _ 8 pathway pathway NOUN NN Number=Sing _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 Fc Fc PROPN NNP Number=Sing _ _ _ _ 11 receptors receptor NOUN NNS Number=Plur _ _ _ _ 12 leading lead VERB VBG VerbForm=Ger _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 different different ADJ JJ Degree=Pos _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 important important ADJ JJ Degree=Pos _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 leukocyte leukocyte VERB VB VerbForm=Inf _ _ _ _ 21 biology biology NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 initiates initiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 tyrosine tyrosine ADJ JJ Degree=Pos _ _ _ _ 26 kinases kinase NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 MAPK Mapk PROPN NNP Number=Sing _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ; ; PUNCT , _ _ _ _ _ 32 but but CCONJ CC _ _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 contrast contrast NOUN NN Number=Sing _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 other other ADJ JJ Degree=Pos _ _ _ _ 37 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 38 kinase kinase NOUN NN Number=Sing _ _ _ _ 39 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 FcR-mediated FcR-mediated ADJ JJ Degree=Pos _ _ _ _ 42 MAPK MAPK NOUN NN Number=Sing _ _ _ _ 43 activation activation NOUN NN Number=Sing _ _ _ _ 44 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 45 not not PART RB _ _ _ _ _ 46 involve involve VERB VB VerbForm=Inf _ _ _ _ 47 Ras Ras PROPN NNP Number=Sing _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6724 # text = Document 003001817 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001817 003001817 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6725 # text = In vivo inhibition of NF-kappa B in T-lineage cells leads to a dramatic decrease in cell proliferation and cytokine production and to increased cell apoptosis in response to mitogenic stimuli, but not to abnormal thymopoiesis. 1 In in ADP IN _ _ _ _ _ 2 vivo vivo ADJ JJ Degree=Pos _ _ _ _ 3 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 lineage lineage NOUN NN Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 dramatic dramatic ADJ JJ Degree=Pos _ _ _ _ 17 decrease decrease NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 23 production production NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 response response NOUN NN Number=Sing _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 33 stimuli stimuli NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 but but CCONJ CC _ _ _ _ _ 36 not not ADV RB _ _ _ _ _ 37 to to PART TO _ _ _ _ _ 38 abnormal abnormal VERB VB VerbForm=Inf _ _ _ _ 39 thymopoiesis thymopoiesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6726 # text = To understand the role of NF-kappa B complexes in T cell development and activation, we have generated transgenic mice in which RelA and c-Rel complexes were selectively inhibited in the T-lineage cells by specific expression of a trans-dominant form of I kappa B alpha. 1 To to PART TO _ _ _ _ _ 2 understand understand VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 complexes complex NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 T T PROPN NNP Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 development development NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 19 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 22 mice mouse NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 RelA RelA PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 Rel Rel NOUN NN Number=Sing _ _ _ _ 30 complexes complex NOUN NNS Number=Plur _ _ _ _ 31 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 selectively selectively ADV RB _ _ _ _ _ 33 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 lineage lineage NOUN NN Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ _ 39 by by ADP IN _ _ _ _ _ 40 specific specific ADJ JJ Degree=Pos _ _ _ _ 41 expression expression NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 44 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 - - PUNCT , _ _ _ _ SpaceAfter=No 46 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 47 form form NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 50 kappa kappa PROPN NNP Number=Sing _ _ _ _ 51 B b PROPN NNP Number=Sing _ _ _ _ 52 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 6727 # text = Transgene expression did not affect the thymic development, but led to lowered numbers of splenic T cells and to a dramatic decrease in the ex vivo proliferative response of splenic T lymphocytes. 1 Transgene Transgene PROPN NNP Number=Sing _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 affect affect VERB VB VerbForm=Inf _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 thymic thymic ADJ JJ Degree=Pos _ _ _ _ 8 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 but but CCONJ CC _ _ _ _ _ 11 led lead VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 lowered lower ADJ JJ Degree=Pos _ _ _ _ 14 numbers number NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 splenic splenic ADJ JJ Degree=Pos _ _ _ _ 17 T T PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 dramatic dramatic ADJ JJ Degree=Pos _ _ _ _ 23 decrease decrease NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 ex ex NOUN NN Number=Sing _ _ _ _ 27 vivo vivo ADP IN _ _ _ _ _ 28 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 29 response response NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 splenic splenic ADJ JJ Degree=Pos _ _ _ _ 32 T T PROPN NNP Number=Sing _ _ _ _ 33 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 6728 # text = Analysis of IL-2 and IL-2R alpha expression demonstrated that the perturbation of the proliferation response was not attributable to an abnormal expression of these genes. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2R 2r NOUN NN Number=Sing _ _ _ _ 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 perturbation perturbation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 attributable attributable ADJ JJ Degree=Pos _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 abnormal abnormal ADJ JJ Degree=Pos _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 29 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 6729 # text = In contrast, expression of IL-4, IL-10, and IFN-gamma was strongly inhibited in the transgenic T cells. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 IFN IFN NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 gamma gamma NOUN NN Number=Sing _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 strongly strongly ADV RB _ _ _ _ _ 20 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 6730 # text = The proliferative deficiency of the transgenic T cells was associated with an increased apoptosis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 3 deficiency deficiency NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 6731 # text = These results point out the involvement of NF-kappa B/Rel family proteins in growth signaling pathways by either regulating proteins involved in the IL-2 signaling or by functionally interfering with the cell cycle progression. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 point point VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 out out ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 involvement involvement NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 Rel Rel NOUN NN Number=Sing _ _ _ _ 14 family family NOUN NN Number=Sing _ _ _ _ 15 proteins protein NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 growth growth NOUN NN Number=Sing _ _ _ _ 18 signaling signaling NOUN NN Number=Sing _ _ _ _ 19 pathways pathways NOUN NNS Number=Plur _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 either either CCONJ CC _ _ _ _ _ 22 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 23 proteins protein NOUN NNS Number=Plur _ _ _ _ 24 involved involved ADJ JJ Degree=Pos _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 2 2 NUM CD NumType=Card _ _ _ _ 30 signaling signaling NOUN NN Number=Sing _ _ _ _ 31 or or CCONJ CC _ _ _ _ _ 32 by by SCONJ IN _ _ _ _ _ 33 functionally functionally ADV RB _ _ _ _ _ 34 interfering interfere VERB VBG VerbForm=Ger _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 cycle cycle NOUN NN Number=Sing _ _ _ _ 39 progression progression NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6732 # text = Document 003001820 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001820 003001820 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6733 # text = Pentoxifylline for the treatment of infection with human immunodeficiency virus. 1 Pentoxifylline Pentoxifylline NOUN NN Number=Sing _ _ _ _ 2 for for ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 treatment treatment NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 infection infection NOUN NN Number=Sing _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 10 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6734 # text = Cytokine dysregulation in human immunodeficiency virus type 1 (HIV-1) infection has been documented in numerous studies and has been cited as an important component in the pathogenesis of this retroviral infection. 1 Cytokine Cytokine NOUN NN Number=Sing _ _ _ _ 2 dysregulation dysregulation NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 type type NOUN NN Number=Sing _ _ _ _ 8 1 1 NUM CD NumType=Card _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 infection infection NOUN NN Number=Sing _ _ _ _ 15 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 17 documented document VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 numerous numerous ADJ JJ Degree=Pos _ _ _ _ 20 studies study NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 24 cited cit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 as as ADP IN _ _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 important important ADJ JJ Degree=Pos _ _ _ _ 28 component component NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 34 retroviral retroviral ADJ JJ Degree=Pos _ _ _ _ 35 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 6735 # text = Pharmacological modification of cytokine dysregulation, therefore, has been suggested as a therapeutic modality for HIV-1 infection. 1 Pharmacological Pharmacological ADJ JJ Degree=Pos _ _ _ _ 2 modification modification NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 5 dysregulation dysregulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 therefore therefore ADV RB _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 11 suggested suggest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 15 modality modality NOUN NN Number=Sing _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 6736 # text = Dr. Dezube of Beth Israel Hospital (Boston) concisely reviews the state of our knowledge regarding the effects of pentoxifylline on expression of tumor necrosis factor-alpha, a cytokine known to influence HIV-1 replication and to play a possible role in the clinical manifestations of advanced infection with this virus. 1 Dr. Dr. PROPN NNP Number=Sing _ _ _ _ 2 Dezube Dezube PROPN NNP Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Beth Beth PROPN NNP Number=Sing _ _ _ _ 5 Israel Israel PROPN NNP Number=Sing _ _ _ _ 6 Hospital Hospital PROPN NNP Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 Boston Boston PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 concisely concisely ADV RB _ _ _ _ _ 11 reviews review VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 state state NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 16 knowledge knowledge NOUN NN Number=Sing _ _ _ _ 17 regarding regard VERB VBG VerbForm=Ger _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 effects effect NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 pentoxifylline pentoxifylline NOUN NN Number=Sing _ _ _ _ 22 on on ADP IN _ _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 tumor tumor NOUN NN Number=Sing _ _ _ _ 26 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 -alpha -alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 32 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 influence influence NOUN NN Number=Sing _ _ _ _ 35 HIV Hiv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT , _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ _ 38 replication replication NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 to to PART TO _ _ _ _ _ 41 play play VERB VB VerbForm=Inf _ _ _ _ 42 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 possible possible ADJ JJ Degree=Pos _ _ _ _ 44 role role NOUN NN Number=Sing _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 48 manifestations manifestation NOUN NNS Number=Plur _ _ _ _ 49 of of ADP IN _ _ _ _ _ 50 advanced advanced ADJ JJ Degree=Pos _ _ _ _ 51 infection infection NOUN NN Number=Sing _ _ _ _ 52 with with ADP IN _ _ _ _ _ 53 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 54 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 6737 # text = Pentoxifylline, a trisubstituted xanthine derivative, has been used to decrease blood viscosity and is reasonably well tolerated by most recipients of the drug. 1 Pentoxifylline Pentoxifylline PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 trisubstituted trisubstitute VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 xanthine xanthine NOUN NN Number=Sing _ _ _ _ 6 derivative derivative NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 10 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 decrease decrease VERB VB VerbForm=Inf _ _ _ _ 13 blood blood NOUN NN Number=Sing _ _ _ _ 14 viscosity viscosity NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 reasonably reasonably ADV RB _ _ _ _ _ 18 well well ADV RB Degree=Pos _ _ _ _ 19 tolerated tolerate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 most most ADJ JJS Degree=Sup _ _ _ _ 22 recipients recipient NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 drug drug NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 6738 # text = Results of preliminary studies, many of which were conducted by Dr. Dezube, suggest that use of this agent in combination with antiretroviral compounds may prove useful in the treatment of patients with HIV-1 infection. 1 Results result NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 preliminary preliminary ADJ JJ Degree=Pos _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 many many ADJ JJ Degree=Pos _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 conducted conduct VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 Dr. Dr. PROPN NNP Number=Sing _ _ _ _ 13 Dezube Dezube PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 suggest suggest VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 16 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 17 use use NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 20 agent agent NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 combination combination NOUN NN Number=Sing _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 antiretroviral antiretroviral ADJ JJ Degree=Pos _ _ _ _ 25 compounds compound NOUN NNS Number=Plur _ _ _ _ 26 may may AUX MD VerbForm=Fin _ _ _ _ 27 prove prove VERB VB VerbForm=Inf _ _ _ _ 28 useful useful ADJ JJ Degree=Pos _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 treatment treatment NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 patients patient NOUN NNS Number=Plur _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ _ 38 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6739 # text = Document 003001826 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001826 003001826 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6740 # text = DNA-binding studies of the Epstein-Barr virus nuclear antigen 2 (EBNA-2): evidence for complex formation by latent membrane protein gene promoter-binding proteins in EBNA-2-positive cell lines. 1 DNA- DNA- SYM NFP _ _ _ _ SpaceAfter=No 2 binding bind VERB VBG VerbForm=Ger _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 Barr Barr PROPN NNP Number=Sing _ _ _ _ 9 virus virus NOUN NN Number=Sing _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 antigen antigen NOUN NN Number=Sing _ _ _ _ 12 2 2 NUM CD NumType=Card _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 EBNA EBNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 : : PUNCT : _ _ _ _ _ 19 evidence evidence NOUN NN Number=Sing _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 complex complex ADJ JJ Degree=Pos _ _ _ _ 22 formation formation NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 latent latent ADJ JJ Degree=Pos _ _ _ _ 25 membrane membrane NOUN NN Number=Sing _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 binding binding VERB VBG VerbForm=Ger _ _ _ _ 31 proteins protein NOUN NNS Number=Plur _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 positive positive ADJ JJ Degree=Pos _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6741 # text = The Epstein-Barr virus (EBV) nuclear antigen 2 (EBNA-2) protein is essential for the immortalization of human primary B cells by EBV. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 Barr Barr PROPN NNP Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 antigen antigen NOUN NN Number=Sing _ _ _ _ 11 2 2 NUM CD NumType=Card _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 EBNA EBNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 essential essential ADJ JJ Degree=Pos _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 immortalization immortalization NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 primary primary ADJ JJ Degree=Pos _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 6742 # text = EBNA-2 trans-activates cellular and viral genes like CD23, c-fgr, latent membrane protein 1 (LMP1) and terminal protein 1 (TP1). 1 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 - - PUNCT : _ _ _ _ SpaceAfter=No 6 activates activate NOUN NNS Number=Plur _ _ _ _ 7 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 viral viral ADJ JJ Degree=Pos _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ _ 11 like like ADP IN _ _ _ _ _ 12 CD23 CD23 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 c- c- SYM NFP _ _ _ _ SpaceAfter=No 15 fgr fgr ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 latent latent ADJ JJ Degree=Pos _ _ _ _ 18 membrane membrane NOUN NN Number=Sing _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 1 1 NUM CD NumType=Card _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 LMP1 Lmp1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ _ 27 1 1 NUM CD NumType=Card _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 TP1 TP1 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 6743 # text = Trans-activation of the TP1 promoter and of the BamHI C promoter has already been investigated in detail and appears to be mediated via protein-protein interactions and not by direct binding of EBNA-2 type A (of EBV type 1) to the DNA. 1 Trans- Trans- SYM NFP _ _ _ _ SpaceAfter=No 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 TP1 tP1 PROPN NNP Number=Sing _ _ _ _ 6 promoter promoter NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 BamHI BamHI PROPN NNP Number=Sing _ _ _ _ 11 C C PROPN NNP Number=Sing _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 already already ADV RB _ _ _ _ _ 15 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 16 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 detail detail NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 via via ADP IN _ _ _ _ _ 25 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 26 protein protein NOUN NN Number=Sing _ _ _ _ 27 interactions interaction NOUN NNS Number=Plur _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 not not ADV RB _ _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 direct direct ADJ JJ Degree=Pos _ _ _ _ 32 binding binding NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 2 2 NUM CD NumType=Card _ _ _ _ 37 type type NOUN NN Number=Sing _ _ _ _ 38 A a SYM SYM _ _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 of of ADP IN _ _ _ _ _ 41 EBV EBV PROPN NNP Number=Sing _ _ _ _ 42 type type NOUN NN Number=Sing _ _ _ _ 43 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ _ 45 to to ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 DNA. DNA. PROPN NNP Number=Sing _ _ _ _ # sent_id = 6744 # text = EBNA-2 is able to trans-activate the expression of the LMP gene in several cell lines. 1 EBNA EBNa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 able able ADJ JJ Degree=Pos _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 activate activate VERB VB VerbForm=Inf _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 LMP LMP PROPN NNP Number=Sing _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 several several ADJ JJ Degree=Pos _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 6745 # text = Various reports have delineated the cis-acting elements of the LMP promoter through which EBNA-2 mediates trans-activation. 1 Various various ADJ JJ Degree=Pos _ _ _ _ 2 reports report NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 delineated delineate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 acting acting VERB VBG VerbForm=Ger _ _ _ _ 9 elements element NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 LMP LMP PROPN NNP Number=Sing _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 through through ADP IN _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 mediates mediate NOUN NNS Number=Plur _ _ _ _ 20 trans- trans- SYM SYM _ _ _ _ SpaceAfter=No 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 6746 # text = To determine whether EBNA-2 also trans-activates the LMP promoter by protein-protein interactions, we performed a series of gel retardation assays and competition experiments with LMP promoter fragments of different sizes. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 trans tran VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 LMP LMP NOUN NN Number=Sing _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 interactions interaction NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 20 performed perform VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 series series NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 gel gel NOUN NN Number=Sing _ _ _ _ 25 retardation retardation NOUN NN Number=Sing _ _ _ _ 26 assays assay NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 competition competition NOUN NN Number=Sing _ _ _ _ 29 experiments experiment NOUN NNS Number=Plur _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 LMP LMP NOUN NN Number=Sing _ _ _ _ 32 promoter promoter NOUN NN Number=Sing _ _ _ _ 33 fragments fragment NOUN NNS Number=Plur _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 different different ADJ JJ Degree=Pos _ _ _ _ 36 sizes size NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 6747 # text = We determined that the protein-binding region on the LMP promoter was within a 42 bp fragment encompassing nucleotides -135 to -176 relative to the LMP transcriptional start site. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 determined determine VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 region region NOUN NN Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 LMP LMP NOUN NN Number=Sing _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 within within ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 42 42 NUM CD NumType=Card _ _ _ _ 16 bp bp NOUN NN Number=Sing _ _ _ _ 17 fragment fragment NOUN NN Number=Sing _ _ _ _ 18 encompassing encompasse VERB VBG VerbForm=Ger _ _ _ _ 19 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 135 135 NUM CD NumType=Card _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 - - SYM SYM _ _ _ _ SpaceAfter=No 24 176 176 NUM CD NumType=Card _ _ _ _ 25 relative relative ADV RB _ _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 LMP LMP PROPN NNP Number=Sing _ _ _ _ 29 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 30 start start NOUN NN Number=Sing _ _ _ _ 31 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 6748 # text = None of the DNA fragments investigated indicated interaction of EBNA-2 with the DNA via protein-protein interactions. 1 None none NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ _ 5 fragments fragment NOUN NNS Number=Plur _ _ _ _ 6 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 indicated indicated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 interaction interaction NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 DNA dna NOUN NN Number=Sing _ _ _ _ 16 via via ADP IN _ _ _ _ _ 17 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 interactions interaction NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 6749 # text = No significant differences between EBNA-2-positive and EBNA-2-negative nuclear extracts could be seen in the gel retardation assay under conditions that clearly showed binding of EBNA-2A to the TP1 promoter. 1 No no DET DT _ _ _ _ _ 2 significant significant ADJ JJ Degree=Pos _ _ _ _ 3 differences difference NOUN NNS Number=Plur _ _ _ _ 4 between between ADP IN _ _ _ _ _ 5 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 positive positive ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 negative negative ADJ JJ Degree=Pos _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 extracts extract NOUN NNS Number=Plur _ _ _ _ 18 could could AUX MD VerbForm=Fin _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 gel gel NOUN NN Number=Sing _ _ _ _ 24 retardation retardation NOUN NN Number=Sing _ _ _ _ 25 assay assay NOUN NN Number=Sing _ _ _ _ 26 under under ADP IN _ _ _ _ _ 27 conditions condition NOUN NNS Number=Plur _ _ _ _ 28 that that PRON WDT PronType=Rel _ _ _ _ 29 clearly clearly ADV RB _ _ _ _ _ 30 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 binding binding VERB VBG VerbForm=Ger _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 2A 2A PROPN NNP Number=Sing _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 TP1 tP1 PROPN NNP Number=Sing _ _ _ _ 39 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 6750 # text = However, analysis of sucrose gradient fractions in the gel retardation assay provided evidence that the LMP promoter-binding proteins form a complex of higher M(r) in EBNA-2-positive cell extracts. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 sucrose sucrise DET DT Number=Plur|PronType=Dem _ _ _ _ 6 gradient gradient ADJ JJ Degree=Pos _ _ _ _ 7 fractions fraction NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 gel gel NOUN NN Number=Sing _ _ _ _ 11 retardation retardation NOUN NN Number=Sing _ _ _ _ 12 assay assay NOUN NN Number=Sing _ _ _ _ 13 provided provide VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 evidence evidence NOUN NN Number=Sing _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 LMP LMP PROPN NNP Number=Sing _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 binding binding VERB VBG VerbForm=Ger _ _ _ _ 21 proteins protein NOUN NNS Number=Plur _ _ _ _ 22 form from ADP IN Typo=Yes _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 complex complex NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 higher higher ADJ JJR Degree=Cmp _ _ _ _ 27 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 r r NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 positive positive ADJ JJ Degree=Pos _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 6751 # text = These complexes were destroyed by detergent. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 complexes complexe NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 destroyed destroy VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 detergent detergent NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ _ # sent_id = 6752 # text = We deduce from these results that EBNA-2-positive cells might indeed contain specific complexes bound to the LMP promoter which are, however, too labile to be detected in a standard gel retardation assay. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 deduce deduce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 EBNA EBNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 positive positive ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 might might AUX MD VerbForm=Fin _ _ _ _ 14 indeed indeed ADV RB _ _ _ _ _ 15 contain contain VERB VB VerbForm=Inf _ _ _ _ 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 complexes complexe NOUN NNS Number=Plur _ _ _ _ 18 bound bound ADJ JJ Degree=Pos _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 LMP Lmp NOUN NN Number=Sing _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 however however ADV RB _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 too too ADV RB _ _ _ _ _ 29 labile labile ADJ JJ Degree=Pos _ _ _ _ 30 to to PART TO _ _ _ _ _ 31 be be AUX VB VerbForm=Inf _ _ _ _ 32 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 standard standard ADJ JJ Degree=Pos _ _ _ _ 36 gel gel NOUN NN Number=Sing _ _ _ _ 37 retardation retardation NOUN NN Number=Sing _ _ _ _ 38 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6753 # text = Document 003001831 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001831 003001831 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6754 # text = Immunosuppressant PG490 (triptolide) inhibits T-cell interleukin-2 expression at the level of purine-box/nuclear factor of activated T-cells and NF-kappaB transcriptional activation. 1 Immunosuppressant Immunosuppressant PROPN NNP Number=Sing _ _ _ _ 2 PG490 PG490 PROPN NNP Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 triptolide triptolide NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 7 T- T- PUNCT : _ _ _ _ SpaceAfter=No 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 at at ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 level level NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 purine purine NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 31 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6755 # text = PG490 (triptolide) is a diterpene triepoxide with potent immunosuppressive and antiinflammatory properties. 1 PG490 PG490 NOUN NN Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 triptolide triptolide NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 diterpene diterpene NOUN NN Number=Sing _ _ _ _ 8 triepoxide triepoxide NOUN NN Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 potent potent NOUN NN Number=Sing _ _ _ _ 11 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 antiinflammatory antiinflammatory ADJ JJ Degree=Pos _ _ _ _ 14 properties property NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 6756 # text = PG490 inhibits interleukin(IL)-2 expression by normal human peripheral blood lymphocytes stimulated with phorbol 12-myristate 13-acetate (PMA) and antibody to CD3 (IC50 of 10 ng/ml), and with PMA and ionomycin (Iono, IC50 of 40 ng/ml). 1 PG490 PG490 NUM CD NumType=Card _ _ _ _ 2 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 3 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 normal normal ADJ JJ Degree=Pos _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 14 blood blood NOUN NN Number=Sing _ _ _ _ 15 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 16 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 19 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 myristate myristate NOUN NN Number=Sing _ _ _ _ 22 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 acetate acetate NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 antibody antibody PRON NN Number=Sing _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 IC50 IC50 NUM CD NumType=Card _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 10 10 NUM CD NumType=Card _ _ _ _ 36 ng/ ng/ PUNCT HYPH _ _ _ _ SpaceAfter=No 37 ml ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 with with ADP IN _ _ _ _ _ 42 PMA Pma PROPN NNP Number=Sing _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 ionomycin ionomycin PROPN NNP Number=Sing _ _ _ _ 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 Iono Iono PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 IC50 IC50 NUM CD NumType=Card _ _ _ _ 49 of of ADP IN _ _ _ _ _ 50 40 40 NUM CD NumType=Card _ _ _ _ 51 ng/ ng/ PUNCT HYPH _ _ _ _ SpaceAfter=No 52 ml ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 6757 # text = In Jurkat T-cells, PG490 inhibits PMA/Iono-stimulated IL-2 transcription. 1 In in ADP IN _ _ _ _ _ 2 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 3 T- T- PUNCT : _ _ _ _ SpaceAfter=No 4 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 PG490 PG490 NUM CD NumType=Card _ _ _ _ 7 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 8 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 / / PUNCT , _ _ _ _ SpaceAfter=No 10 Iono Iono PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 6758 # text = PG490 inhibits the induction of DNA binding activity at the purine-box/antigen receptor response element (ARRE)/nuclear factor of activated T-cells (NF-AT) target sequence but not at the NF-kappaB site. 1 PG490 PG490 PROPN NNP Number=Sing _ _ _ _ 2 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 induction induction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 at at ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 purine purine NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 15 antigen antigen NOUN NN Number=Sing _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ _ 17 response response NOUN NN Number=Sing _ _ _ _ 18 element element NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 ARRE ARRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 / / PUNCT , _ _ _ _ SpaceAfter=No 23 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 target target NOUN NN Number=Sing _ _ _ _ 35 sequence sequence NOUN NN Number=Sing _ _ _ _ 36 but but CCONJ CC _ _ _ _ _ 37 not not PART RB _ _ _ _ _ 38 at at ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 43 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 6759 # text = PG490 can completely inhibit transcriptional activation at the purine-box/ARRE/NF-AT and NF-kappaB target DNA sequences triggered by all stimuli examined (PMA, PMA/Iono, tumor necrosis factor-alpha). 1 PG490 PG490 NOUN NN Number=Sing _ _ _ _ 2 can can AUX MD VerbForm=Fin _ _ _ _ 3 completely completely ADV RB _ _ _ _ _ 4 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 5 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 at at ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 purine purine NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 -box/ARRE/NF-AT -box/arre/nf-at NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 15 target target NOUN NN Number=Sing _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ _ 17 sequences sequence NOUN NNS Number=Plur _ _ _ _ 18 triggered trigger VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 all all DET DT _ _ _ _ _ 21 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 22 examined examine VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 / / PUNCT , _ _ _ _ SpaceAfter=No 28 Iono Iono PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 tumor tumor NOUN NN Number=Sing _ _ _ _ 31 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 32 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 6760 # text = PG490 also inhibits PMA-stimulated activation of a chimeric transcription factor in which the C-terminal TA1 transactivation domain of NF-kappaB p65 is fused to the DNA binding domain of GAL4. 1 PG490 PG490 PROPN NNP Number=Sing _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 PMA Pma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 chimeric chimeric ADJ JJ Degree=Pos _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 C- C- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 terminal terminal NOUN NN Number=Sing _ _ _ _ 18 TA1 tA1 NUM CD NumType=Card _ _ _ _ 19 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 20 domain domain NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 25 p65 p65 NOUN NN Number=Sing _ _ _ _ 26 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 fused fused ADJ JJ Degree=Pos _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 DNA dna NOUN NN Number=Sing _ _ _ _ 31 binding binde VERB VBG VerbForm=Ger _ _ _ _ 32 domain domain NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 GAL4 GAL4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 6761 # text = In 16HBE human bronchial epithelial cells, IL-8 expression is regulated predominantly by NF-kappaB, and PG490 but not cyclosporin A can completely inhibit expression of IL-8. 1 In in ADP IN _ _ _ _ _ 2 16HBE 16hbe ADJ JJ Degree=Pos _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 bronchial bronchial ADJ JJ Degree=Pos _ _ _ _ 5 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 8 8 NUM CD NumType=Card _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 predominantly predominantly ADV RB _ _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 PG490 PG490 NUM CD NumType=Card _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 not not PART RB _ _ _ _ _ 24 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 25 A a NOUN NN Number=Sing _ _ _ _ 26 can can AUX MD VerbForm=Fin _ _ _ _ 27 completely completely ADV RB _ _ _ _ _ 28 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 6762 # text = The mechanism of PG490 inhibition of cytokine gene expression differs from cyclosporin 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 PG490 PG490 NUM CD NumType=Card _ _ _ _ 5 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 differs differ NOUN NNS Number=Plur _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ # sent_id = 6763 # text = A and involves nuclear inhibition of transcriptional activation of NF-kappaB and the purine-box regulator operating at the ARRE/NF-AT site at a step after specific DNA binding. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 purine purine NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 box box NOUN NN Number=Sing _ _ _ _ 18 regulator regulator NOUN NN Number=Sing _ _ _ _ 19 operating operating VERB VBG VerbForm=Ger _ _ _ _ 20 at at ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 ARRE ARRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 / / PUNCT , _ _ _ _ SpaceAfter=No 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 AT at PROPN NNP Number=Sing _ _ _ _ 27 site site NOUN NN Number=Sing _ _ _ _ 28 at at ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 step step NOUN NN Number=Sing _ _ _ _ 31 after after ADP IN _ _ _ _ _ 32 specific specific ADJ JJ Degree=Pos _ _ _ _ 33 DNA dna NOUN NN Number=Sing _ _ _ _ 34 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6764 # text = Document 003001835 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001835 003001835 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6765 # text = NF-kappaB functions as both a proapoptotic and antiapoptotic regulatory factor within a single cell type. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 functions function NOUN NNS Number=Plur _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 both both CCONJ CC _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 proapoptotic proapoptotic ADJ JJ Degree=Pos _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 antiapoptotic antiapoptotic ADJ JJ Degree=Pos _ _ _ _ 11 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 within within ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 single single ADJ JJ Degree=Pos _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6766 # text = Recently NF-kappaB has been shown to have both proapoptotic and antiapoptotic functions. 1 Recently recently ADV RB _ _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 5 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 7 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 have have VERB VB VerbForm=Inf _ _ _ _ 10 both both CCONJ CC _ _ _ _ _ 11 proapoptotic proapoptotic ADJ JJ Degree=Pos _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 antiapoptotic antiapoptotic ADJ JJ Degree=Pos _ _ _ _ 14 functions function NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 6767 # text = In T cell hybridomas, both T cell activators and glucocorticoids induce apoptosis. 1 In in ADP IN _ _ _ _ _ 2 T t PROPN NNP Number=Sing _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 hybridomas hybridoma NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 both both DET DT _ _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 activators activator NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 12 induce induce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 6768 # text = Here we show that blockade of NF-kappaB activity, using a dominant negative IkappaBalpha, has opposite effects on these two apoptotic signals. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 blockade blockade NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 using use VERB VBG VerbForm=Ger _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 15 negative negative NOUN NN Number=Sing _ _ _ _ 16 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 opposite opposite ADJ JJ Degree=Pos _ _ _ _ 20 effects effect NOUN NNS Number=Plur _ _ _ _ 21 on on ADP IN _ _ _ _ _ 22 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 23 two two NUM CD NumType=Card _ _ _ _ 24 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 25 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 6769 # text = Treatment with PMA plus ionomycin (P/I) results in the upregulation of Fas Ligand (FasL) and induction of apoptosis. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 PMA Pma PROPN NNP Number=Sing _ _ _ _ 4 plus plus CCONJ CC _ _ _ _ _ 5 ionomycin ionomycin NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 P/ P/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 results result NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 Fas Fas PROPN NNP Number=Sing _ _ _ _ 16 Ligand Ligand PROPN NNP Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 FasL FasL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 induction induction NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 6770 # text = Inhibition of NF-kappaB activity inhibits the P/I mediated induction of FasL mRNA and decreases the level of apoptosis in these cultures, thus establishing NF-kappaB as a proapoptotic factor in this context. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 P/ p/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 mediated mediate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 FasL FasL PROPN NNP Number=Sing _ _ _ _ 15 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 decreases decrease VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 level level NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 24 cultures culture NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 thus thus ADV RB _ _ _ _ _ 27 establishing establish VERB VBG VerbForm=Ger _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 31 as as ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 proapoptotic proapoptotic ADJ JJ Degree=Pos _ _ _ _ 34 factor factor NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 37 context context NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 6771 # text = Conversely, inhibition of NF-kappaB confers a tenfold increase in glucocorticoid mediated apoptosis, establishing that NF-kappaB also functions as an antiapoptotic factor. 1 Conversely Conversely ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 confers confer NOUN NNS Number=Plur _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 tenfold tenfold NOUN NN Number=Sing _ _ _ _ 11 increase increase NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 14 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 establishing establish VERB VBG VerbForm=Ger _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 22 also also ADV RB _ _ _ _ _ 23 functions function VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 antiapoptotic antiapoptotic ADJ JJ Degree=Pos _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 6772 # text = We conclude that NF-kappaB is a context-dependent apoptosis regulator. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 context context NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 13 regulator regulator NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 6773 # text = Our data suggests that NF-kappaB may function as an antiapoptotic factor in thymocytes while functioning as a proapoptotic factor in mature peripheral T cells. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 may may AUX MD VerbForm=Fin _ _ _ _ 9 function function VERB VB VerbForm=Inf _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 antiapoptotic antiapoptotic ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 16 while while SCONJ IN _ _ _ _ _ 17 functioning function VERB VBG VerbForm=Ger _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 proapoptotic proapoptotic ADJ JJ Degree=Pos _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 mature mature ADJ JJ Degree=Pos _ _ _ _ 24 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6774 # text = Document 003001837 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001837 003001837 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6775 # text = Immune hyperactivation of HIV-1-infected T cells mediated by Tat and the CD28 pathway. 1 Immune Immune PROPN NNP Number=Sing _ _ _ _ 2 hyperactivation hyperactivation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 -infected -infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 Tat Tat PROPN NNP Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 16 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6776 # text = Human immunodeficiency virus-type 1 (HIV-1) infection is characterized by a chronic state of immune hyperactivation in patients. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 3 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 type type NOUN NN Number=Sing _ _ _ _ 6 1 1 NUM CD NumType=Card _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 infection infection NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 characterized characterize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 18 state state NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 immune immune ADJ JJ Degree=Pos _ _ _ _ 21 hyperactivation hyperactivation NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 6777 # text = Infection of human peripheral blood lymphocytes with HIV-1 in vitro resulted in increased interleukin-2 (IL-2) secretion in response to T cell activation via the CD3 and CD28 receptors. 1 Infection Infection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 5 blood blood NOUN NN Number=Sing _ _ _ _ 6 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 vitro vitro NUM CD NumType=Card _ _ _ _ 13 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 secretion secretion NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 response response NOUN NN Number=Sing _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 cell cell PROPN NNP Number=Sing _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ _ 31 via via ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 CD28 Cd28 NOUN NN Number=Sing _ _ _ _ 36 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 6778 # text = Expression of the HIV-1 transactivator 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 transactivator transactivator NOUN NN Number=Sing _ _ _ _ # sent_id = 6779 # text = Tat recapitulated this phenotype and was associated with increased IL-2 secretion in response to costimulation with CD3 plus CD28. 1 Tat Tat PROPN NNP Number=Sing _ _ _ _ 2 recapitulated recapitulate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 secretion secretion NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 response response NOUN NN Number=Sing _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 costimulation costimulation VERB VB VerbForm=Inf _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 20 plus plus CCONJ CC _ _ _ _ _ 21 CD28 Cd28 NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 6780 # text = IL-2 superinduction by 1 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 superinduction superinduction NOUN NN Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ # sent_id = 6781 # text = Tat occurred at the transcriptional level, was mediated by the CD28-responsive element in the IL-2 promoter, and was exclusively dependent on the 29 amino acids encoded by the second exon of Tat. 1 Tat Tat PROPN NNP Number=Sing _ _ _ _ 2 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 at at ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 6 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 CD28 Cd28 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 15 element element NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 exclusively exclusively ADV RB _ _ _ _ _ 26 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 27 on on ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 29 29 NUM CD NumType=Card _ _ _ _ 30 amino amino NOUN NN Number=Sing _ _ _ _ 31 acids acid NOUN NNS Number=Plur _ _ _ _ 32 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 36 exon exon NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 Tat Tat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6782 # text = Document 003001844 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001844 003001844 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6783 # text = Inhibition of nuclear factor kappaB activation attenuates apoptosis resistance in lymphoid cells. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 attenuates attenuate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 apoptosis apoptosis DET DT Number=Sing|PronType=Dem _ _ _ _ 9 resistance resistance NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6784 # text = Death-inducing ligands (DILs) such as tumor necrosis factor alpha (TNFalpha) or the cytotoxic drug doxorubicin have been shown to activate a nuclear factor kappaB (NFkappaB)-dependent program that may rescue cells from apoptosis induction. 1 Death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 inducing inducing NOUN NN Number=Sing _ _ _ _ 4 ligands ligand NOUN NNS Number=Plur _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 DILs DIL NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 such such ADJ JJ Degree=Pos _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 tumor tumor NOUN NN Number=Sing _ _ _ _ 11 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 cytotoxic cytotoxic ADJ JJ Degree=Pos _ _ _ _ 20 drug drug NOUN NN Number=Sing _ _ _ _ 21 doxorubicin doxorubicin NOUN NN Number=Sing _ _ _ _ 22 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 24 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 activate activate VERB VB VerbForm=Inf _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 29 factor factor NOUN NN Number=Sing _ _ _ _ 30 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 36 program program NOUN NN Number=Sing _ _ _ _ 37 that that PRON WDT PronType=Rel _ _ _ _ 38 may may AUX MD VerbForm=Fin _ _ _ _ 39 rescue rescue VERB VB VerbForm=Inf _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ _ 41 from from ADP IN _ _ _ _ _ 42 apoptosis apoptosis DET DT Number=Sing|PronType=Dem _ _ _ _ 43 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 6785 # text = We demonstrate here that TRAIL (TNF-related apoptosis-inducing ligand), a recently identified DIL, also activates NFkappaB in lymphoid cell lines in a kinetic similar to TNFalpha. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 TRAIL trail NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 related related ADJ JJ Degree=Pos _ _ _ _ 10 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 13 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 recently recently ADV RB _ _ _ _ _ 18 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 DIL Dil NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 also also ADV RB _ _ _ _ _ 22 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 lines line NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 kinetic kinetic ADJ JJ Degree=Pos _ _ _ _ 31 similar similar ADJ JJ Degree=Pos _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 6786 # text = NFkappaB activity is independent from FADD, caspases, and apoptosis induction. 1 NFkappaB Nfkappab ADJ JJ Degree=Pos _ _ _ _ 2 activity activity NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 independent independent ADJ JJ Degree=Pos _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 FADD fadd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 caspases caspase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 apoptosis apoptosis DET DT Number=Sing|PronType=Dem _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 6787 # text = To study the influence of NFkappaB activity on apoptosis mediated by TRAIL, CD95, TNFalpha, or doxorubicin, NFkappaB activation was inhibited using the proteasome inhibitor N-acetyl-L-leucinyl-L-leucinyl-L-norleucinal or transient overexpression of mutant IkappaBalpha. 1 To to PART TO _ _ _ _ _ 2 study study VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 influence influence NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NFkappaB NFkappaB ADJ JJ Degree=Pos _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 apoptosis apoptosis DET DT Number=Sing|PronType=Dem _ _ _ _ 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 TRAIL trail PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 CD95 CD95 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 doxorubicin doxorubicin NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 using use VERB VBG VerbForm=Ger _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 proteasome proteasome ADJ JJ Degree=Pos _ _ _ _ 28 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 29 N-acetyl-L-leucinyl-L-leucinyl-L-norleucinal N-acetyl-L-leucinyl-L-leucinyl-L-norleucinal ADJ JJ Degree=Pos _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 transient transient ADJ JJ Degree=Pos _ _ _ _ 32 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 35 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 6788 # text = Sensitivity for induction of apoptosis was markedly increased by these treatments in apoptosis sensitive cell lines. 1 Sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 2 for for ADP IN _ _ _ _ _ 3 induction induction NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 markedly markedly ADV RB _ _ _ _ _ 8 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 treatments treatment NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 apoptosis apoptosis DET DT Number=Sing|PronType=Dem _ _ _ _ 14 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 6789 # text = Moreover, both in cell lines and in primary leukemia cells that are resistant towards induction of apoptosis by DILs and doxorubicin, antagonization of NFkappaB activity partially restored apoptosis sensitivity. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 both both CCONJ CC _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 lines line NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 primary primary ADJ JJ Degree=Pos _ _ _ _ 10 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 15 towards towards ADP IN _ _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 DILs DIL NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 doxorubicin doxorubicin NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 antagonization antagonization NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ _ 28 partially partially ADV RB _ _ _ _ _ 29 restored restore VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 apoptosis apoptosis DET DT Number=Sing|PronType=Dem _ _ _ _ 31 sensitivity sensitivity NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 6790 # text = These data suggest that inhibition of NFkappaB activation may provide a molecular approach to increase apoptosis sensitivity in anticancer treatment. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NFkappaB Nfkappab ADJ JJ Degree=Pos _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 may may AUX MD VerbForm=Fin _ _ _ _ 10 provide provide VERB VB VerbForm=Inf _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 13 approach approach NOUN NN Number=Sing _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 increase increase VERB VB VerbForm=Inf _ _ _ _ 16 apoptosis apoptosis DET DT Number=Sing|PronType=Dem _ _ _ _ 17 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 anticancer anticancer ADJ JJ Degree=Pos _ _ _ _ 20 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6791 # text = Document 003001845 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001845 003001845 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6792 # text = Regulation of CD14 expression during monocytic differentiation induced with 1 alpha,25-dihydroxyvitamin D3. CD14, a monocyte/macrophage receptor for the complex of LPS and LPS binding protein, is a differentiation marker for the monocyte/macrophage lineage. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 14 14 NUM CD NumType=Card _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 during during ADP IN _ _ _ _ _ 7 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 8 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 1 1 NUM CD NumType=Card _ _ _ _ 12 alpha,25 alpha,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 -dihydroxyvitamin -dihydroxyvitamin ADJ JJ Degree=Pos _ _ _ _ 14 D3 D3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n 16 CD14 CD14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 22 receptor receptor NOUN NN Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 complex complex NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 LPS LPS PROPN NNP Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 LPS LPS PROPN NNP Number=Sing _ _ _ _ 30 binding binding VERB VBG VerbForm=Ger _ _ _ _ 31 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 36 marker marker NOUN NN Number=Sing _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 / / PUNCT , _ _ _ _ SpaceAfter=No 41 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 42 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 6793 # text = We have analyzed the regulation of CD14 expression during 1 alpha,25-dihydroxyvitamin D3 (VitD3)-induced monocytic differentiation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 regulation regulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 14 14 NUM CD NumType=Card _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 during during ADP IN _ _ _ _ _ 11 1 1 NUM CD NumType=Card _ _ _ _ 12 alpha,25 alpha,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 -dihydroxyvitamin -dihydroxyvitamin NOUN NN Number=Sing _ _ _ _ 14 D3 D3 NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 VitD3 VitD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 21 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 6794 # text = Using FACS, Northern blotting, and nuclear run-on analyses, we demonstrate that the up-regulation of CD14 expression during monocytic cell maturation is regulated mainly at the level of gene transcription, and that new protein synthesis is required for CD14 induction. 1 Using use AUX VBG VerbForm=Ger _ _ _ _ 2 FACS Fac ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 5 blotting blotting NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 run run VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 on on ADP IN _ _ _ _ _ 12 analyses analysis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 15 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 regulation regulation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 14 14 NUM CD NumType=Card _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 during during ADP IN _ _ _ _ _ 26 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 maturation maturation NOUN NN Number=Sing _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 mainly mainly ADV RB _ _ _ _ _ 32 at at ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 level level NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 gene gene NOUN NN Number=Sing _ _ _ _ 37 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 that that SCONJ IN _ _ _ _ _ 41 new new ADJ JJ Degree=Pos _ _ _ _ 42 protein protein NOUN NN Number=Sing _ _ _ _ 43 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 44 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 45 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 46 for for ADP IN _ _ _ _ _ 47 CD14 CD14 NUM CD NumType=Card _ _ _ _ 48 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 6795 # text = We have recently cloned the CD14 5' upstream sequence and demonstrated its tissue-specific promoter activity. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 recently recently ADV RB _ _ _ _ _ 4 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 CD C NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 14 14 NUM CD NumType=Card _ _ _ _ 8 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ' ' PUNCT `` _ _ _ _ _ 10 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 11 sequence sequence NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 tissue- tissue- SYM NFP _ _ _ _ SpaceAfter=No 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 6796 # text = Using stable transfection of the monocytoid U937 cell line with a series of deletion mutants of the CD14 5' upstream sequence coupled to a reporter gene construct, we show that bp -128 to -70 is the critical region for the induction of CD14 expression. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 stable stable ADJ JJ Degree=Pos _ _ _ _ 3 transfection transfection NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 monocytoid monocytoid NOUN NN Number=Sing _ _ _ _ 7 U937 U937 NUM CD NumType=Card _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 line line NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 series series NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 deletion deletion NOUN NN Number=Sing _ _ _ _ 15 mutants mutant NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 14 14 NUM CD NumType=Card _ _ _ _ 20 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ' ' PUNCT `` _ _ _ _ _ 22 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 23 sequence sequence NOUN NN Number=Sing _ _ _ _ 24 coupled couple VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 reporter reporter NOUN NN Number=Sing _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 construct construct NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 32 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 34 bp bp NOUN NN Number=Sing _ _ _ _ 35 -128 -128 NUM CD NumType=Card _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 - - SYM SYM _ _ _ _ SpaceAfter=No 38 70 70 NUM CD NumType=Card _ _ _ _ 39 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 critical critical ADJ JJ Degree=Pos _ _ _ _ 42 region region NOUN NN Number=Sing _ _ _ _ 43 for for ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 induction induction NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 14 14 NUM CD NumType=Card _ _ _ _ 49 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 6797 # text = This region contains two binding sites for the Sp1 transcription factor. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 region region NOUN NN Number=Sing _ _ _ _ 3 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 binding bind VERB VBG VerbForm=Ger _ _ _ _ 6 sites site NOUN NNS Number=Plur _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 Sp1 sp1 PROPN NNP Number=Sing _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 6798 # text = A 3-bp mutation at the distal Sp1-binding site not only eliminates Sp1 interaction, but also abolishes most of the VitD3 induction of CD14 expression. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 bp bp NOUN NN Number=Sing _ _ _ _ 5 mutation mutation NOUN NN Number=Sing _ _ _ _ 6 at at ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 distal distal ADJ JJ Degree=Pos _ _ _ _ 9 Sp1 sp1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ _ 13 not not ADV RB _ _ _ _ _ 14 only only ADV RB _ _ _ _ _ 15 eliminates eliminate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 17 interaction interaction NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 also also ADV RB _ _ _ _ _ 21 abolishes abolish ADV RB _ _ _ _ _ 22 most most ADJ JJS Degree=Sup _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 VitD3 VitD3 NUM CD NumType=Card _ _ _ _ 26 induction induction NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 14 14 NUM CD NumType=Card _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 6799 # text = Electrophoretic mobility shift analysis does not detect a direct interaction of the CD14 distal Sp1-binding site with the vitamin D3 receptor and its partner, the retinoid X receptor. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 detect detect VERB VB VerbForm=Inf _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 direct direct ADJ JJ Degree=Pos _ _ _ _ 10 interaction interaction NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 14 14 NUM CD NumType=Card _ _ _ _ 15 distal distal ADJ JJ Degree=Pos _ _ _ _ 16 Sp1 sp1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 -binding -bind VERB VBG VerbForm=Ger _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 vitamin vitamin ADJ JJ Degree=Pos _ _ _ _ 22 D3 D3 NOUN NN Number=Sing _ _ _ _ 23 receptor receptor NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 26 partner partner NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 retinoid retinoid NOUN NN Number=Sing _ _ _ _ 30 X x ADP IN _ _ _ _ _ 31 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 6800 # text = These data demonstrate that VitD3 induces CD14 indirectly through some intermediary factor, and suggest a critical role for Sp1 in this process. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 VitD3 VitD3 NUM CD NumType=Card _ _ _ _ 6 induces induce NOUN NNS Number=Plur _ _ _ _ 7 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 14 14 NUM CD NumType=Card _ _ _ _ 9 indirectly indirectly ADV RB _ _ _ _ _ 10 through through ADP IN _ _ _ _ _ 11 some some DET DT _ _ _ _ _ 12 intermediary intermediary ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 critical critical ADJ JJ Degree=Pos _ _ _ _ 19 role role NOUN NN Number=Sing _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 Sp1 sp1 NUM CD NumType=Card _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 24 process process NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6801 # text = Document 003001847 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001847 003001847 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6802 # text = Activation of the transcription factor NF-kappaB in lipopolysaccharide-stimulated U937 cells. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 U937 U937 NUM CD NumType=Card _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6803 # text = During the course of serious bacterial infections, lipopolysaccharide (LPS) interacts with monocyte/macrophage receptors, resulting in the generation of inflammatory cytokines. 1 During during ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 course course NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 serious serious ADJ JJ Degree=Pos _ _ _ _ 6 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 7 infections infection NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 LPS Lp NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 interacts interacts NOUN NNS Number=Plur _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 / / PUNCT , _ _ _ _ SpaceAfter=No 17 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 18 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 resulting result VERB VBG VerbForm=Ger _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 generation generation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 26 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 6804 # text = Transcription factor NF-kappaB is crucial in activating the transcription of genes encoding proinflammatory cytokines. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 8 in in SCONJ IN _ _ _ _ _ 9 activating activate VERB VBG VerbForm=Ger _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 15 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 16 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 6805 # text = In this paper, we demonstrate that the activation of NF-kappaB by LPS in a promonocytic cell line (U937) followed a rather slow kinetics, depending on the rate of IkappaB-alpha inhibitor hydrolysis. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 paper paper NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 LPS LPS PROPN NNP Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 line line NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 U937 U937 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 followed follow VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 rather rather ADV RB _ _ _ _ _ 27 slow slow ADJ JJ Degree=Pos _ _ _ _ 28 kinetics kinetic NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 depending depend VERB VBG VerbForm=Ger _ _ _ _ 31 on on ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 rate rate NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 alpha alpha NOUN NN Number=Sing _ _ _ _ 38 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 39 hydrolysis hydrolysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 6806 # text = No degradation of p105 and p100 inhibitors was observed under these conditions. 1 No no DET DT _ _ _ _ _ 2 degradation degradation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p105 p105 NUM CD NumType=Card _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 p100 p100 NUM CD NumType=Card _ _ _ _ 7 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 under under ADP IN _ _ _ _ _ 11 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 12 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 6807 # text = The transduction pathway leading to NF-kappaB activation in U937 cells involved the intracellular generation of reactive oxygen species (ROS), as demonstrated by the concomitant inhibitory effects of antioxidants on NF-kappaB activation and the emission of a fluorescent probe reacting intracellularly with hydrogen peroxide. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transduction transduction NOUN NN Number=Sing _ _ _ _ 3 pathway pathway NOUN NN Number=Sing _ _ _ _ 4 leading lead VERB VBG VerbForm=Ger _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 U937 U937 NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 16 generation generation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 19 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 20 species species NOUN NNS Number=Plur _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 ROS Ro NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 as as SCONJ IN _ _ _ _ _ 26 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 concomitant concomitant ADJ JJ Degree=Pos _ _ _ _ 30 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 31 effects effect NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ _ 34 on on ADP IN _ _ _ _ _ 35 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 38 activation activation NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 emission emission NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 44 fluorescent fluorescent ADJ JJ Degree=Pos _ _ _ _ 45 probe probe NOUN NN Number=Sing _ _ _ _ 46 reacting reacte VERB VBG VerbForm=Ger _ _ _ _ 47 intracellularly intracellularly ADV RB _ _ _ _ _ 48 with with ADP IN _ _ _ _ _ 49 hydrogen hydrogen NUM CD NumType=Card _ _ _ _ 50 peroxide peroxide NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 6808 # text = This ROS pathway was also characterized by the use of other inhibitors. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 ROS Ros NOUN NN Number=Sing _ _ _ _ 3 pathway pathway NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 characterized characterize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 use use NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 other other ADJ JJ Degree=Pos _ _ _ _ 12 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 6809 # text = This finding indicates that phospholipase A2 and 5-lipoxygenase are also involved. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 finding finding NOUN NN Number=Sing _ _ _ _ 3 indicates indicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 phospholipase phospholipase NOUN NN Number=Sing _ _ _ _ 6 A2 A2 NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 lipoxygenase lipoxygenase NOUN NN Number=Sing _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 also also ADV RB _ _ _ _ _ 13 involved involved ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 6810 # text = However, the NF-kappaB activation pathway involving the acidic sphingomyelinase of the endolysosomial membrane did not seem to participate in the LPS-induced NF-kappaB activation in U937 cells. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 pathway pathway NOUN NN Number=Sing _ _ _ _ 9 involving involve VERB VBG VerbForm=Ger _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 acidic acidic ADJ JJ Degree=Pos _ _ _ _ 12 sphingomyelinase sphingomyelinase NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 endolysosomial endolysosomial ADJ JJ Degree=Pos _ _ _ _ 16 membrane membrane NOUN NN Number=Sing _ _ _ _ 17 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 not not PART RB _ _ _ _ _ 19 seem seem VERB VB VerbForm=Inf _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 participate participate VERB VB VerbForm=Inf _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 LPS Lps NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 U937 U937 NUM CD NumType=Card _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6811 # text = Document 003001849 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001849 003001849 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6812 # text = Overexpression of HSF2-beta inhibits hemin-induced heat shock gene expression and erythroid differentiation in K562 cells. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HSF2 HSF2 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT : _ _ _ _ SpaceAfter=No 5 beta beta NOUN NN Number=Sing _ _ _ _ 6 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 7 hemin- hemin- PUNCT : _ _ _ _ SpaceAfter=No 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 heat heat NOUN NN Number=Sing _ _ _ _ 10 shock shock NOUN NN Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 K562 K562 NUM CD NumType=Card _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6813 # text = Acquisition of heat shock factor 2 (HSF2) DNA binding activity is accompanied by induced transcription of heat shock genes in hemin-treated K562 cells undergoing erythroid differentiation. 1 Acquisition Acquisition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 heat heat NOUN NN Number=Sing _ _ _ _ 4 shock shock NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 2 2 NUM CD NumType=Card _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 HSF2 HSF2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ _ 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 heat heat NOUN NN Number=Sing _ _ _ _ 20 shock shock NOUN NN Number=Sing _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 hemin- hemin- SYM NFP _ _ _ _ SpaceAfter=No 24 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 K562 K562 NUM CD NumType=Card _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 undergoing undergoing VERB VBG VerbForm=Ger _ _ _ _ 28 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 29 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 6814 # text = Previous studies revealed that HSF2 consists of two alternatively spliced isoforms, HSF2-alpha and HSF2-beta, whose relative abundance is developmentally regulated and varies between different tissues. 1 Previous previous ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 HSF2 HSF2 NUM CD NumType=Card _ _ _ _ 6 consists consist NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 two two NUM CD NumType=Card _ _ _ _ 9 alternatively alternatively ADV RB _ _ _ _ _ 10 spliced splice VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 isoforms isoform NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 HSF2 Hsf2 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 alpha alpha NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 HSF2 Hsf2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 22 relative relative ADJ JJ Degree=Pos _ _ _ _ 23 abundance abundance NOUN NN Number=Sing _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 developmentally developmentally ADV RB _ _ _ _ _ 26 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 varies varies NOUN NNS Number=Plur _ _ _ _ 29 between between ADP IN _ _ _ _ _ 30 different different ADJ JJ Degree=Pos _ _ _ _ 31 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 6815 # text = To investigate whether the molar ratio of HSF2-alpha and HSF2-beta isoforms is crucial for the activation of HSF2 and whether the HSF2 isoforms play functionally distinct roles during the hemin-mediated erythroid differentiation, we generated cell clones expressing different levels of HSF2-alpha and HSF2-beta. 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 molar molar ADJ JJ Degree=Pos _ _ _ _ 6 ratio ratio NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 HSF2 HSF2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 HSF2 Hsf2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 beta beta NOUN NN Number=Sing _ _ _ _ 15 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 HSF2 Hsf2 NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 whether whether SCONJ IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 HSF2 Hsf2 NOUN NN Number=Sing _ _ _ _ 27 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 28 play play VERB VB VerbForm=Inf _ _ _ _ 29 functionally functionally ADV RB _ _ _ _ _ 30 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 31 roles role NOUN NNS Number=Plur _ _ _ _ 32 during during ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 hemin- hemin- SYM SYM _ _ _ _ SpaceAfter=No 35 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 37 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 40 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 cell cell NOUN NN Number=Sing _ _ _ _ 42 clones clone NOUN NNS Number=Plur _ _ _ _ 43 expressing express VERB VBG VerbForm=Ger _ _ _ _ 44 different different ADJ JJ Degree=Pos _ _ _ _ 45 levels level NOUN NNS Number=Plur _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 HSF2 Hsf2 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 alpha alpha NOUN NN Number=Sing _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 HSF2 Hsf2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 6816 # text = We show that in parental K562 cells, the HSF2-alpha isoform is predominantly expressed and HSF2 can be activated upon hemin treatment. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 parental parental ADJ JJ Degree=Pos _ _ _ _ 6 K562 K562 NUM CD NumType=Card _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 HSF2 Hsf2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 alpha alpha NOUN NN Number=Sing _ _ _ _ 13 isoform isoform NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 predominantly predominantly ADV RB _ _ _ _ _ 16 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 HSF2 Hsf2 NUM CD NumType=Card _ _ _ _ 19 can can AUX MD VerbForm=Fin _ _ _ _ 20 be be AUX VB VerbForm=Inf _ _ _ _ 21 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 upon upon ADP IN _ _ _ _ _ 23 hemin hemin ADJ JJ Degree=Pos _ _ _ _ 24 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 6817 # text = In contrast, when HSF2-beta is expressed at levels exceeding those of endogenous HSF2-alpha, the hemin-induced DNA binding activity and transcription of heat shock genes are repressed, whereas overexpression of HSF2-alpha results in an enhanced hemin response. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 when when ADV WRB PronType=Int _ _ _ _ 5 HSF2 HSF2 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT : _ _ _ _ SpaceAfter=No 7 beta beta NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 at at ADP IN _ _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ _ 12 exceeding exceed VERB VBG VerbForm=Ger _ _ _ _ 13 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 16 HSF2 Hsf2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 hemin- hemin- SYM SYM _ _ _ _ SpaceAfter=No 22 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 DNA dna NOUN NN Number=Sing _ _ _ _ 24 binding binde VERB VBG VerbForm=Ger _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 heat heat NOUN NN Number=Sing _ _ _ _ 30 shock shock NOUN NN Number=Sing _ _ _ _ 31 genes gene NOUN NNS Number=Plur _ _ _ _ 32 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 repressed repress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 whereas whereas SCONJ IN _ _ _ _ _ 36 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 HSF2 HSF2 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 alpha alpha NOUN NN Number=Sing _ _ _ _ 41 results result NOUN NNS Number=Plur _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 44 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 hemin hemin NOUN NN Number=Sing _ _ _ _ 46 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 6818 # text = Furthermore, the hemin-induced accumulation of globin, known as a marker of erythroid differentiation, is decreased in cells overexpressing HSF2-beta. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 hemin- hemin- SYM NFP _ _ _ _ SpaceAfter=No 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 globin globin NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 marker marker NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 16 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 overexpressing overexpresse VERB VBG VerbForm=Ger _ _ _ _ 23 HSF2 HSF2 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 6819 # text = We suggest that HSF2-beta acts as a negative regulator of HSF2 activity during hemin-mediated erythroid differentiation of K562 cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 HSF2 HSF2 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 beta beta NOUN NN Number=Sing _ _ _ _ 7 acts act NOUN NNS Number=Plur _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 negative negative ADJ JJ Degree=Pos _ _ _ _ 11 regulator regulator NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 HSF2 HSF2 NUM CD NumType=Card _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 during during ADP IN _ _ _ _ _ 16 hemin- hemin- SYM NFP _ _ _ _ SpaceAfter=No 17 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 19 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 K562 K562 NUM CD NumType=Card _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6820 # text = Document 003001850 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001850 003001850 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6821 # text = Activation of the human immunodeficiency virus type 1 enhancer is not dependent on NFAT-1. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 type type NOUN NN Number=Sing _ _ _ _ 8 1 1 NUM CD NumType=Card _ _ _ _ 9 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6822 # text = The function of a putative NFAT-1 site in the human immunodeficiency virus type 1 enhancer has been analyzed. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 function function NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 putative putative ADJ JJ Degree=Pos _ _ _ _ 6 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 site site NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 14 virus virus NOUN NN Number=Sing _ _ _ _ 15 type type NOUN NN Number=Sing _ _ _ _ 16 1 1 NUM CD NumType=Card _ _ _ _ 17 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 18 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 20 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 6823 # text = Activation by the T-cell antigen receptor is minimal in Jurkat cells and is mediated by the kappa B sites. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 by by ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 antigen antigen NOUN NN Number=Sing _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ _ 20 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 6824 # text = The putative NFAT-1 region is not required for the response to anti-CD3 or to mitogens in T-cell, B-cell, or monocyte/macrophage leukemia lines, nor is it a cis-acting negative regulatory element. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 putative putative ADJ JJ Degree=Pos _ _ _ _ 3 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 region region NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 response response NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 15 or or CCONJ CC _ _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 mitogens mitogen NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 / / PUNCT , _ _ _ _ SpaceAfter=No 29 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 30 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 31 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 nor nor CCONJ CC _ _ _ _ _ 34 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 -acting -act VERB VBG VerbForm=Ger _ _ _ _ 39 negative negative ADJ JJ Degree=Pos _ _ _ _ 40 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 41 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6825 # text = Document 003001852 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001852 003001852 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6826 # text = Involvement of intracellular Ca2+ in oxidant-induced NF-kappa B activation. 1 Involvement involvement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 4 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 + + SYM SYM _ _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 oxidant oxidant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6827 # text = In human Jurkat T cells and its subclone Wurzburg cells oxidant challenge elevated [Ca2+]i by mobilizing Ca2+ from intracellular stores. 1 In in ADP IN _ _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 4 T T PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 8 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 subclone subclone VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 Wurzburg Wurzburg ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 oxidant oxidant ADJ JJ Degree=Pos _ _ _ _ 13 challenge challenge NOUN NN Number=Sing _ _ _ _ 14 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 + + SYM SYM _ _ _ _ SpaceAfter=No 18 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 i i PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 20 by by SCONJ IN _ _ _ _ _ 21 mobilizing mobilize VERB VBG VerbForm=Ger _ _ _ _ 22 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 + + SYM SYM _ _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 26 stores store NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 6828 # text = In Jurkat cells this effect was rapid and transient, but in Wurzburg cells the response was slow and sustained. 1 In in ADP IN _ _ _ _ _ 2 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 transient transient ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 Wurzburg Wurzburg ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 response response NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 slow slow ADJ JJ Degree=Pos _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 sustained sustain ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 6829 # text = H2O2-induced NF-kappaB activation in Wurzburg cells was not influenced by the presence of extracellular EGTA but was totally inhibited in cells that were loaded with esterified EGTA. 1 H2O2 H2O2 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 Wurzburg Wurzburg PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 influenced influence VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 presence presence NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 19 EGTA EGTA PROPN NNP Number=Sing _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 totally totally ADV RB _ _ _ _ _ 23 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 that that PRON WDT PronType=Rel _ _ _ _ 27 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 loaded load VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 esterified esterify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 EGTA EGTa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 6830 # text = In Jurkat cells that are not sensitive to H2O2-induced NF-kappaB activation, H2O2 potentiated NF-kappaB activation in the presence of sustained high [Ca2+]i following thapsigargin treatment. 1 In in ADP IN _ _ _ _ _ 2 Jurkat Jurkat ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 H2O2 H2O2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 -induced -induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 H2O2 h2o2 PART TO Abbr=Yes _ _ _ _ 17 potentiated potentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 presence presence NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 sustained sustain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 high high ADJ JJ Degree=Pos _ _ _ _ 28 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 Ca2 ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 + + SYM SYM _ _ _ _ SpaceAfter=No 31 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 i i PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 33 following follow VERB VBG VerbForm=Ger _ _ _ _ 34 thapsigargin thapsigargin ADJ JJ Degree=Pos _ _ _ _ 35 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 6831 # text = NF-kappaB regulatory effect of alpha-lipoate and N-acetylcysteine appeared to be, at least in part, due to their ability to stabilize elevation of [Ca2+]i following oxidant challenge. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 lipoate lipoate NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 N- N- PUNCT , _ _ _ _ SpaceAfter=No 12 acetylcysteine acetylcysteine PRON PRP _ _ _ _ _ 13 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 at at ADV RB _ _ _ _ _ 18 least least ADV RBS Degree=Sup _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 part part NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 due due ADP IN _ _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 25 ability ability NOUN NN Number=Sing _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 stabilize stabilize VERB VB VerbForm=Inf _ _ _ _ 28 elevation elevation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 Ca2 Ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 + + SYM SYM _ _ _ _ SpaceAfter=No 33 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 i i PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 35 following follow VERB VBG VerbForm=Ger _ _ _ _ 36 oxidant oxidant ADJ JJ Degree=Pos _ _ _ _ 37 challenge challenge NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 6832 # text = Results of this study indicate that a sustained elevated [Ca2+]i is a significant factor in oxidant-induced NF-kappaB activation. 1 Results result NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ _ 5 indicate indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 sustained sustain ADJ JJ Degree=Pos _ _ _ _ 9 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 + + SYM SYM _ _ _ _ SpaceAfter=No 13 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 i i PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 significant significant ADJ JJ Degree=Pos _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 oxidant oxidant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6833 # text = Document 003001853 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001853 003001853 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6834 # text = Pancreatic islet expression studies and polymorphic DNA markers in the genes encoding hepatocyte nuclear factor-3alpha, -3beta, -3gamma, -4gamma, and -6. 1 Pancreatic Pancreatic ADJ JJ Degree=Pos _ _ _ _ 2 islet islet NOUN NN Number=Sing _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 polymorphic polymorphic ADJ JJ Degree=Pos _ _ _ _ 7 DNA dna NOUN NN Number=Sing _ _ _ _ 8 markers marker NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 genes gene NOUN NNS Number=Plur _ _ _ _ 12 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 13 hepatocyte hepatocyte ADV RB _ _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 -3 -3 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 3gamma 3gamma INTJ UH _ _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 4gamma 4gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 - - SYM SYM _ _ _ _ SpaceAfter=No 31 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6835 # text = The genes encoding the functionally related hepatocyte nuclear factors HNF-1alpha and HNF-4alpha play a critical role in normal pancreatic beta-cell function. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 genes gene NOUN NNS Number=Plur _ _ _ _ 3 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 functionally functionally ADV RB _ _ _ _ _ 6 related related ADJ JJ Degree=Pos _ _ _ _ 7 hepatocyte hepatocyte NOUN NN Number=Sing _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 factors factor NOUN NNS Number=Plur _ _ _ _ 10 HNF Hnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 HNF HNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 -4alpha -4alpha PROPN NNP Number=Sing _ _ _ _ 17 play play VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 critical critical ADJ JJ Degree=Pos _ _ _ _ 20 role role NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 normal normal ADJ JJ Degree=Pos _ _ _ _ 23 pancreatic pancreatic ADJ JJ Degree=Pos _ _ _ _ 24 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 6836 # text = Mutations in these liver-enriched transcription factors result in two forms of early-onset type 2 diabetes (maturity-onset diabetes of the young [MODY]), MODY3 and MODY1, which are characterized by impaired glucose-stimulated insulin secretion, early disease onset, and autosomal dominant inheritance. 1 Mutations Mutation NOUN NNS Number=Plur _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 liver liver NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 enriched enrich VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 result result VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 two two NUM CD NumType=Card _ _ _ _ 12 forms form NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 early early ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 onset onset NOUN NN Number=Sing _ _ _ _ 17 type type NOUN NN Number=Sing _ _ _ _ 18 2 2 NUM CD NumType=Card _ _ _ _ 19 diabetes diabete NOUN NNS Number=Plur _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 maturity maturity NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 onset onset NOUN NN Number=Sing _ _ _ _ 24 diabetes diabete NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 young young ADJ JJ Degree=Pos _ _ _ _ 28 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 MODY MODY NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 MODY3 MODY3 NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 MODY1 mody1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 which which PRON WDT PronType=Rel _ _ _ _ 38 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 39 characterized characterize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 40 by by ADP IN _ _ _ _ _ 41 impaired impaire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 glucose glucose NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 insulin insulin ADP IN _ _ _ _ _ 46 secretion secretion NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 early early ADJ JJ Degree=Pos _ _ _ _ 49 disease disease NOUN NN Number=Sing _ _ _ _ 50 onset onset NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 , , PUNCT , _ _ _ _ _ 52 and and CCONJ CC _ _ _ _ _ 53 autosomal autosomal ADJ JJ Degree=Pos _ _ _ _ 54 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 55 inheritance inheritance NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 6837 # text = The transcriptional hierarchy of HNFs suggests that other proteins of the regulatory cascade might be responsible for other forms of MODY and/or late-onset type 2 diabetes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 3 hierarchy hierarchy NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 HNFs Hnfs PROPN NNP Number=Sing _ _ _ _ 6 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 other other ADJ JJ Degree=Pos _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 13 cascade cascade NOUN NN Number=Sing _ _ _ _ 14 might might AUX MD VerbForm=Fin _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 other other ADJ JJ Degree=Pos _ _ _ _ 19 forms form NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 MODY MODy NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ SpaceAfter=No 23 / / PUNCT , _ _ _ _ SpaceAfter=No 24 or or CCONJ CC _ _ _ _ _ 25 late late ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 onset onset NOUN NN Number=Sing _ _ _ _ 28 type type NOUN NN Number=Sing _ _ _ _ 29 2 2 NUM CD NumType=Card _ _ _ _ 30 diabetes diabete NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 6838 # text = In this study, we show that HNF-3alpha, -3beta, -3gamma, -4gamma, and -6 are expressed in pancreatic beta-cells. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 HNF HNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 -3 -3 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 3gamma 3gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 4gamma 4gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 - - SYM SYM _ _ _ _ SpaceAfter=No 24 6 6 NUM CD NumType=Card _ _ _ _ 25 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 pancreatic pancreatic ADJ JJ Degree=Pos _ _ _ _ 29 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 6839 # text = We report the identification and characterization of simple tandem repeat DNA polymorphisms in the genes encoding HNF-3alpha, -3beta, -3gamma, -4gamma, and -6 and the mapping of HNF-6 to chromosome bands 15q21.1-21.2 by fluorescence in situ hybridization. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 identification identification NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 characterization characterization NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 simple simple ADJ JJ Degree=Pos _ _ _ _ 9 tandem tandem NOUN NN Number=Sing _ _ _ _ 10 repeat repeat VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 DNA dna NOUN NN Number=Sing _ _ _ _ 12 polymorphisms polymorphism NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ _ 16 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 17 HNF Hnf ADV RB _ _ _ _ SpaceAfter=No 18 -3 -3 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 3gamma 3gamma INTJ UH _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 4gamma 4gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 - - SYM SYM _ _ _ _ SpaceAfter=No 33 6 6 NUM CD NumType=Card _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 mapping mapping NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 HNF HNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 6 6 NUM CD NumType=Card _ _ _ _ 41 to to ADP IN _ _ _ _ _ 42 chromosome chromosome DET DT _ _ _ _ _ 43 bands band NOUN NNS Number=Plur _ _ _ _ 44 15q21.1 15q21.1 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 - - SYM SYM _ _ _ _ SpaceAfter=No 46 21.2 21.2 NUM CD NumType=Card _ _ _ _ 47 by by ADP IN _ _ _ _ _ 48 fluorescence fluorescence NOUN NN Number=Sing _ _ _ _ 49 in in ADP IN _ _ _ _ _ 50 situ situ NOUN NN Number=Sing _ _ _ _ 51 hybridization hybridization NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 6840 # text = These markers will be useful to study the role of genetic variation in these genes in the pathogenesis of type 2 diabetes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 markers marker NOUN NNS Number=Plur _ _ _ _ 3 will will AUX MD VerbForm=Fin _ _ _ _ 4 be be AUX VB VerbForm=Inf _ _ _ _ 5 useful useful ADJ JJ Degree=Pos _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 study study VERB VB VerbForm=Inf _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 role role NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 12 variation variation NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 type type NOUN NN Number=Sing _ _ _ _ 21 2 2 NUM CD NumType=Card _ _ _ _ 22 diabetes diabete NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6841 # text = Document 003001854 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001854 003001854 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6842 # text = Steel factor affects SCL expression during normal erythroid differentiation. 1 Steel steel NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 affects affect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 SCL Scl ADJ JJ Degree=Pos _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 during during ADP IN _ _ _ _ _ 7 normal normal ADJ JJ Degree=Pos _ _ _ _ 8 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 9 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6843 # text = Steel factor is one of the growth factors that controls the proliferation and differentiation of hematopoietic cells and SCL, also known as Tcl-5 or Tal-1, is a transcription factor involved in erythropoiesis. 1 Steel steel NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 one one NUM CD NumType=Card _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 growth growth NOUN NN Number=Sing _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 controls control VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 SCL Scl NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 also also ADV RB _ _ _ _ _ 22 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 as as ADP IN _ _ _ _ _ 24 Tcl Tcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 5 5 NUM CD NumType=Card _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 Tal Tal PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ _ 36 involved involved ADJ JJ Degree=Pos _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 erythropoiesis erythropoiesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 6844 # text = In this report, we studied the role of SCL in the proliferation of human peripheral blood burst-forming unit-erythroid (BFU-E) and the effects of Steel factor on SCL expression in proliferating erythroid cells. BFU-E-derived colonies increase progressively in size, as determined by cell number, from day 7 to day 14 of culture, with the greatest increase in colony size (10-fold expansion) occurring between day 7 and day 10. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 SCL SCL PROPN NNP Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 17 blood blood NOUN NN Number=Sing _ _ _ _ 18 burst burst NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 forming form VERB VBG VerbForm=Ger _ _ _ _ 21 unit-erythroid unit-erythroid NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 BFU BFU PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 E e PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 effects effect NOUN NNS Number=Plur _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 Steel steel NOUN NN Number=Sing _ _ _ _ 32 factor factor NOUN NN Number=Sing _ _ _ _ 33 on on ADP IN _ _ _ _ _ 34 SCL Scl ADJ JJ Degree=Pos _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ _ 36 in in SCONJ IN _ _ _ _ _ 37 proliferating proliferat VERB VBG VerbForm=Ger _ _ _ _ 38 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 39 cells. cells. NOUN NN Number=Sing _ _ _ _ 40 BFU BFU PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 -E -E PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 colonies colony NOUN NNS Number=Plur _ _ _ _ 45 increase increase NOUN NN Number=Sing _ _ _ _ 46 progressively progressively ADV RB _ _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 size size NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 as as SCONJ IN _ _ _ _ _ 51 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 52 by by ADP IN _ _ _ _ _ 53 cell cell NOUN NN Number=Sing _ _ _ _ 54 number number NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 , , PUNCT , _ _ _ _ _ 56 from from ADP IN _ _ _ _ _ 57 day day NOUN NN Number=Sing _ _ _ _ 58 7 7 NUM CD NumType=Card _ _ _ _ 59 to to ADP IN _ _ _ _ _ 60 day day NOUN NN Number=Sing _ _ _ _ 61 14 14 NUM CD NumType=Card _ _ _ _ 62 of of ADP IN _ _ _ _ _ 63 culture culture NOUN NN Number=Sing _ _ _ SpaceAfter=No 64 , , PUNCT , _ _ _ _ _ 65 with with ADP IN _ _ _ _ _ 66 the the DET DT Definite=Def|PronType=Art _ _ _ _ 67 greatest greatest ADJ JJS Degree=Sup _ _ _ _ 68 increase increase NOUN NN Number=Sing _ _ _ _ 69 in in ADP IN _ _ _ _ _ 70 colony colony NOUN NN Number=Sing _ _ _ _ 71 size size NOUN NN Number=Sing _ _ _ _ 72 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 73 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 74 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 75 fold fold NOUN NN Number=Sing _ _ _ _ 76 expansion expansion NOUN NN Number=Sing _ _ _ SpaceAfter=No 77 ) ) PUNCT -RRB- _ _ _ _ _ 78 occurring occurre VERB VBG VerbForm=Ger _ _ _ _ 79 between between ADP IN _ _ _ _ _ 80 day day NOUN NN Number=Sing _ _ _ _ 81 7 7 NUM CD NumType=Card _ _ _ _ 82 and and CCONJ CC _ _ _ _ _ 83 day day NOUN NN Number=Sing _ _ _ _ 84 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 85 . . PUNCT . _ _ _ _ _ # sent_id = 6845 # text = SCL protein levels in BFU-E-derived cells were highest in day 7 cells and decreased progressively from day 7 to day 14 of culture, suggesting an association of SCL with erythroid proliferation. 1 SCL Scl ADJ JJ Degree=Pos _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 levels level NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 BFU BFU PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 E e PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 highest highest ADJ JJS Degree=Sup _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 day day NOUN NN Number=Sing _ _ _ _ 15 7 7 NUM CD NumType=Card _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 progressively progressively ADV RB _ _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 day day NOUN NN Number=Sing _ _ _ _ 22 7 7 NUM CD NumType=Card _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 day day NOUN NN Number=Sing _ _ _ _ 25 14 14 NUM CD NumType=Card _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 culture culture NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 30 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 association association NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 SCL SCL NOUN NN Number=Sing _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 36 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 6846 # text = In contrast, SCL mRNA levels did not decrease significantly between day 7 and day 14 cells, suggesting that posttranscriptional mechanisms are largely responsible for the decrease in SCL protein observed. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 SCL Scl PROPN NNP Number=Sing _ _ _ _ 5 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 decrease decrease VERB VB VerbForm=Inf _ _ _ _ 10 significantly significantly ADV RB _ _ _ _ _ 11 between between ADP IN _ _ _ _ _ 12 day day NOUN NN Number=Sing _ _ _ _ 13 7 7 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 day day NOUN NN Number=Sing _ _ _ _ 16 14 14 NUM CD NumType=Card _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 posttranscriptional posttranscriptional ADJ JJ Degree=Pos _ _ _ _ 22 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 23 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 largely largely ADV RB _ _ _ _ _ 25 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 decrease decrease NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 SCL SCL PROPN NNP Number=Sing _ _ _ _ 31 protein protein NOUN NN Number=Sing _ _ _ _ 32 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 6847 # text = The role of SCL in Steel factor-induced erythroid proliferation was then examined. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 SCL SCL PROPN NNP Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 Steel Steel PROPN NNP Number=Sing _ _ _ _ 7 factor-induced factor-induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 9 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 then then ADV RB PronType=Dem _ _ _ _ 12 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 6848 # text = In BFU-E-derived colonies cultured with Steel factor, colony size was significantly increased compared to control. 1 In in ADP IN _ _ _ _ _ 2 BFU BFU PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 -E -E PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 colonies colony NOUN NNS Number=Plur _ _ _ _ 7 cultured culture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 Steel steel NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 colony colony NOUN NN Number=Sing _ _ _ _ 13 size size NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 significantly significantly ADV RB _ _ _ _ _ 16 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 control control VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 6849 # text = In day 7 and day 10 erythroid precursors cultured with Steel factor, SCL protein was increased significantly compared to control. 1 In in ADP IN _ _ _ _ _ 2 day day NOUN NN Number=Sing _ _ _ _ 3 7 7 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 day day NOUN NN Number=Sing _ _ _ _ 6 10 10 NUM CD NumType=Card _ _ _ _ 7 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 8 precursors precursor NOUN NNS Number=Plur _ _ _ _ 9 cultured culture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 Steel steel NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 SCL SCL PROPN NNP Number=Sing _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 significantly significantly ADV RB _ _ _ _ _ 19 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 control control VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 6850 # text = The increase in SCL protein levels in early erythroid precursors stimulated with Steel factor suggests one mechanism through which Steel factor may enhance normal erythroid proliferation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 increase increase NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 SCL Scl ADJ JJ Degree=Pos _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 early early ADJ JJ Degree=Pos _ _ _ _ 9 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 10 precursors precursor NOUN NNS Number=Plur _ _ _ _ 11 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 Steel steel NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 one one NUM CD NumType=Card _ _ _ _ 17 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 18 through through ADP IN _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 Steel steel NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 may may AUX MD VerbForm=Fin _ _ _ _ 23 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 24 normal normal ADJ JJ Degree=Pos _ _ _ _ 25 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 26 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 6851 # text = SCL mRNA levels assessed by Northern blot in day 7 cells did not increase significantly in response to Steel factor stimulation, suggesting that posttranscriptional mechanisms may also be important in the increase in SCL protein observed in response to Steel. 1 SCL Scl PROPN NNP Number=Sing _ _ _ _ 2 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 3 levels level NOUN NNS Number=Plur _ _ _ _ 4 assessed assess VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 7 blot blot NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 day day NOUN NN Number=Sing _ _ _ _ 10 7 7 NUM CD NumType=Card _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 increase increase VERB VB VerbForm=Inf _ _ _ _ 15 significantly significantly ADV RB _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 response response NOUN NN Number=Sing _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 Steel Steel VERB VB VerbForm=Inf _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 posttranscriptional posttranscriptional ADJ JJ Degree=Pos _ _ _ _ 26 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 27 may may AUX MD VerbForm=Fin _ _ _ _ 28 also also ADV RB _ _ _ _ _ 29 be be AUX VB VerbForm=Inf _ _ _ _ 30 important important ADJ JJ Degree=Pos _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 increase increase NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 SCL SCL PROPN NNP Number=Sing _ _ _ _ 36 protein protein ADV RB _ _ _ _ _ 37 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 response response NOUN NN Number=Sing _ _ _ _ 40 to to ADP IN _ _ _ _ _ 41 Steel Steel NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6852 # text = Document 003001873 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001873 003001873 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6853 # text = AM580, a stable benzoic derivative of retinoic acid, has powerful and selective cyto-differentiating effects on acute promyelocytic leukemia cells. 1 AM580 AM580 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 stable stable ADJ JJ Degree=Pos _ _ _ _ 5 benzoic benzoic ADJ JJ Degree=Pos _ _ _ _ 6 derivative derivative NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 9 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 powerful powerful ADJ JJ Degree=Pos _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 selective selective ADJ JJ Degree=Pos _ _ _ _ 15 cyto-differentiating cyto-differentiating NOUN NN Number=Sing _ _ _ _ 16 effects effect NOUN NNS Number=Plur _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 acute acute ADJ JJ Degree=Pos _ _ _ _ 19 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ _ 20 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6854 # text = All-trans retinoic acid (ATRA) is successfully used in the cyto-differentiating treatment of acute promyelocytic leukemia (APL). 1 All all DET DT _ _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 trans tran NOUN NNS Number=Plur _ _ _ _ 4 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 5 acid acid NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 ATRA ATRA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 successfully successfully ADV RB _ _ _ _ _ 11 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 cyto-differentiating cyto-differentiating NOUN NN Number=Sing _ _ _ _ 15 treatment treatment NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 acute acute ADJ JJ Degree=Pos _ _ _ _ 18 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ _ 19 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 APL APL NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 6855 # text = Paradoxically, APL cells express PML-RAR, an aberrant form of the retinoic acid receptor type alpha (RAR alpha) derived from the leukemia-specific t(15;17) chromosomal translocation. 1 Paradoxically paradoxically ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 APL Apl ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 PML pMl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 RAR Rar PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 aberrant aberrant ADJ JJ Degree=Pos _ _ _ _ 12 form form NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 16 acid acid ADJ JJ Degree=Pos _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 type type NOUN NN Number=Sing _ _ _ _ 19 alpha alpha NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 RAR Rar X GW _ _ _ _ _ 22 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 derived derive VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 from from ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 leukemia-specific leukemia-specific ADJ JJ Degree=Pos _ _ _ _ 28 t t NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 15 15 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ; ; PUNCT , _ _ _ _ SpaceAfter=No 32 17 17 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 chromosomal chromosomal ADJ JJ Degree=Pos _ _ _ _ 35 translocation translocation NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 6856 # text = We show here that AM580, a stable retinobenzoic derivative originally synthesized as a RAR alpha agonist, is a powerful inducer of granulocytic maturation in NB4, an APL-derived cell line, and in freshly isolated APL blasts. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 AM am NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 580 580 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 stable stable ADJ JJ Degree=Pos _ _ _ _ 10 retinobenzoic retinobenzoic NOUN NN Number=Sing _ _ _ _ 11 derivative derivative NOUN NN Number=Sing _ _ _ _ 12 originally originally ADV RB _ _ _ _ _ 13 synthesized synthesize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 RAR RAR PROPN NNP Number=Sing _ _ _ _ 17 alpha alpha NOUN NN Number=Sing _ _ _ _ 18 agonist agonist NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 powerful powerful ADJ JJ Degree=Pos _ _ _ _ 23 inducer inducer NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 26 maturation maturation NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 NB4 NB4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 APL APL NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 freshly freshly ADV RB _ _ _ _ _ 40 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 APL Apl ADJ JJ Degree=Pos _ _ _ _ 42 blasts blast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 6857 # text = After treatment of APL cells with AM580 either alone or in combination with granulocyte colony-stimulating factor (G-CSF), the compound induces granulocytic maturation, as assessed by determination of the levels of leukocyte alkaline phosphatase, CD11b, CD33, and G-CSF receptor mRNA, at concentrations that are 10- to 100-fold lower than those of ATRA necessary to produce similar effects. 1 After after ADP IN _ _ _ _ _ 2 treatment treatment NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 APL Apl ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 AM am NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 580 580 NUM CD NumType=Card _ _ _ _ 9 either either CCONJ CC _ _ _ _ _ 10 alone alone ADJ JJ Degree=Pos _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 combination combination NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 granulocyte granulocyte NOUN NN Number=Sing _ _ _ _ 16 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 stimulating stimulating NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 G- G- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 CSF CSF NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 compound compound NOUN NN Number=Sing _ _ _ _ 27 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 29 maturation maturation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 as as SCONJ IN _ _ _ _ _ 32 assessed assess VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 determination determination NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 levels level NOUN NNS Number=Plur _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 40 alkaline alkaline NOUN NN Number=Sing _ _ _ _ 41 phosphatase phosphatase NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 CD11 CD11 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 b b NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 CD33 CD33 NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 G G PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 CSF CSF PROPN NNP Number=Sing _ _ _ _ 52 receptor receptor NOUN NN Number=Sing _ _ _ _ 53 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 , , PUNCT , _ _ _ _ _ 55 at at ADP IN _ _ _ _ _ 56 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 57 that that PRON WDT PronType=Rel _ _ _ _ 58 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 59 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 60 - - SYM SYM _ _ _ _ _ 61 to to ADP IN _ _ _ _ _ 62 100 100 NUM CD NumType=Card _ _ _ SpaceAfter=No 63 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 64 fold fold VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 65 lower lower ADJ JJR Degree=Cmp _ _ _ _ 66 than than ADP IN _ _ _ _ _ 67 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 68 of of ADP IN _ _ _ _ _ 69 ATRA Atra PROPN NNP Number=Sing _ _ _ _ 70 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 71 to to PART TO _ _ _ _ _ 72 produce produce VERB VB VerbForm=Inf _ _ _ _ 73 similar similar ADJ JJ Degree=Pos _ _ _ _ 74 effects effect NOUN NNS Number=Plur _ _ _ SpaceAfter=No 75 . . PUNCT . _ _ _ _ _ # sent_id = 6858 # text = By contrast, AM580 is not effective as ATRA in modulating the expression of these differentiation markers in the HL-60 cell line and in freshly isolated granulocytes obtained from the peripheral blood of chronic myelogenous leukemia patients during the stable phase of the disease. 1 By by ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 AM am NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 580 580 NUM CD NumType=Card _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 effective effective ADJ JJ Degree=Pos _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 ATRA ATRA PROPN NNP Number=Sing _ _ _ _ 11 in in SCONJ IN _ _ _ _ _ 12 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 17 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 18 markers marker NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 HL HL NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 60 60 NUM CD NumType=Card _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 line line NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 freshly freshly ADV RB _ _ _ _ _ 29 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ _ 31 obtained obtaine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 from from ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 35 blood blood NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 38 myelogenous myelogenous ADJ JJ Degree=Pos _ _ _ _ 39 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 40 patients patient NOUN NNS Number=Plur _ _ _ _ 41 during during ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 stable stable ADJ JJ Degree=Pos _ _ _ _ 44 phase phase NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 6859 # text = In NB4 cells, two other synthetic nonselective RAR ligands are capable of inducing LAP as much as AM580, whereas RAR beta- or RAR gamma-specific ligands are totally ineffective. 1 In in ADP IN _ _ _ _ _ 2 NB4 NB4 NUM CD NumType=Card _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 two two NUM CD NumType=Card _ _ _ _ 6 other other ADJ JJ Degree=Pos _ _ _ _ 7 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 8 nonselective nonselective ADJ JJ Degree=Pos _ _ _ _ 9 RAR Rar NOUN NN Number=Sing _ _ _ _ 10 ligands ligand NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 capable capable ADJ JJ Degree=Pos _ _ _ _ 13 of of SCONJ IN _ _ _ _ _ 14 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 15 LAP lap ADV RB _ _ _ _ _ 16 as as ADV RB _ _ _ _ _ 17 much much ADJ JJ Degree=Pos _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 AM580 AM580 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 whereas whereas SCONJ IN _ _ _ _ _ 22 RAR RAR PROPN NNP Number=Sing _ _ _ _ 23 beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 RAR RAR PROPN NNP Number=Sing _ _ _ _ 27 gamma gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 specific specific ADJ JJ Degree=Pos _ _ _ _ 30 ligands ligand NOUN NNS Number=Plur _ _ _ _ 31 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 32 totally totally ADV RB _ _ _ _ _ 33 ineffective ineffective ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 6860 # text = These results show that AM580 is more powerful than ATRA in modulating the expression of differentiation antigens only in cells in which PML-RAR is present. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 AM am NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 580 580 NUM CD NumType=Card _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 more more ADV RBR _ _ _ _ _ 9 powerful powerful ADJ JJ Degree=Pos _ _ _ _ 10 than than ADP IN _ _ _ _ _ 11 ATRA ATRA PROPN NNP Number=Sing _ _ _ _ 12 in in SCONJ IN _ _ _ _ _ 13 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 18 antigens antigen NOUN NNS Number=Plur _ _ _ _ 19 only only ADV RB _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 PML PML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 RAR RAR PROPN NNP Number=Sing _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 present present ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 6861 # text = Binding experiments, using COS-7 cells transiently transfected with PML-RAR and the normal RAR alpha, show that AM580 has a lower affinity than ATRA for both receptors. 1 Binding binding VERB VBG VerbForm=Ger _ _ _ _ 2 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 using use VERB VBG VerbForm=Ger _ _ _ _ 5 COS Cos NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 7 7 NUM CD NumType=Card _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 transiently transiently ADV RB _ _ _ _ _ 10 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 PML PML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 RAR RAR PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 normal normal ADJ JJ Degree=Pos _ _ _ _ 18 RAR Rar NOUN NN Number=Sing _ _ _ _ 19 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 show show VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 22 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 23 AM am NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 580 580 NUM CD NumType=Card _ _ _ _ 25 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 lower lower ADJ JJR Degree=Cmp _ _ _ _ 28 affinity affinity NOUN NN Number=Sing _ _ _ _ 29 than than ADP IN _ _ _ _ _ 30 ATRA ATRa PROPN NNP Number=Sing _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 both both DET DT _ _ _ _ _ 33 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 6862 # text = However, in the presence of PML-RAR, the synthetic retinoid is a much better transactivator of retinoic acid-responsive element-containing promoters than the natural retinoid, whereas, in the presence of RAR alpha, AM580 and ATRA have similar activity. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 presence presence NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 PML PML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 RAR RAR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 13 retinoid retinoid NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 much much ADJ JJ Degree=Pos _ _ _ _ 17 better better ADJ JJR Degree=Cmp _ _ _ _ 18 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 21 acid acid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 24 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 containing contain VERB VBG VerbForm=Ger _ _ _ _ 27 promoters promoter NOUN NNS Number=Plur _ _ _ _ 28 than than ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 natural natural ADJ JJ Degree=Pos _ _ _ _ 31 retinoid retinoid NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 whereas wherea NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 presence presence NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 RAR RAR PROPN NNP Number=Sing _ _ _ _ 40 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 AM580 AM580 PROPN NNP Number=Sing _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 ATRA ATRA PROPN NNP Number=Sing _ _ _ _ 45 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 46 similar similar ADJ JJ Degree=Pos _ _ _ _ 47 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 6863 # text = This may explain the strong cyto-differentiating potential of AM580 in PML-RAR-containing leukemic cells. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 may may AUX MD VerbForm=Fin _ _ _ _ 3 explain explain VERB VB VerbForm=Inf _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 strong strong ADJ JJ Degree=Pos _ _ _ _ 6 cyto-differentiating cyto-differentiating NOUN NN Number=Sing _ _ _ _ 7 potential potential NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 AM Am NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 580 580 NUM CD NumType=Card _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 PML PML NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 RAR RAR NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 containing contain VERB VBG VerbForm=Ger _ _ _ _ 17 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6864 # text = Document 003001882 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001882 003001882 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6865 # text = Suppression of nuclear factor kappa B and CD18-mediated leukocyte adhesion to the corneal endothelium by dexamethasone. 1 Suppression Suppression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B B PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 CD18 CD18 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 -mediated -mediate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 leukocyte leukocyte ADJ JJ Degree=Pos _ _ _ _ 11 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 corneal corneal NOUN NN Number=Sing _ _ _ _ 15 endothelium endothelium NOUN NN Number=Sing _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6866 # text = PURPOSE: To demonstrate that leukocyte adhesion to cultured corneal endothelial cells is mediated by the CD18 antigen, and to determine whether dexamethasone directly suppresses adhesion by inhibiting activation of nuclear factor kappa B (NFkappaB). 1 PURPOSE purpose NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 To to PART TO _ _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 leukocyte leukocyte ADJ JJ Degree=Pos _ _ _ _ 7 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 cultured culture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 corneal corneal NOUN NN Number=Sing _ _ _ _ 11 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 18 18 NUM CD NumType=Card _ _ _ _ 19 antigen antigen NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 determine determine VERB VB VerbForm=Inf _ _ _ _ 24 whether whether SCONJ IN _ _ _ _ _ 25 dexamethasone dexamethasone VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 directly directly ADV RB _ _ _ _ _ 27 suppresses suppress VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 29 by by SCONJ IN _ _ _ _ _ 30 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 31 activation activation NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 34 factor factor NOUN NN Number=Sing _ _ _ _ 35 kappa kappa NOUN NN Number=Sing _ _ _ _ 36 B b PROPN NNP Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 6867 # text = METHODS: Cultured bovine corneal endothelium was stimulated for 6 hours by 40 micron/ml tumor necrosis factor alpha (TNFalpha). 1 METHODS method NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Cultured Culture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 bovine bovine NOUN NN Number=Sing _ _ _ _ 5 corneal corneal NOUN NN Number=Sing _ _ _ _ 6 endothelium endothelium NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 6 6 NUM CD NumType=Card _ _ _ _ 11 hours hour NOUN NNS Number=Plur _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 40 40 NUM CD NumType=Card _ _ _ _ 14 micron micron NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 ml ml NOUN NN Number=Sing _ _ _ _ 17 tumor tumor NOUN NN Number=Sing _ _ _ _ 18 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 alpha alpha NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 6868 # text = Dexamethasone was added 1 hour before TNFalpha stimulation in the dexamethasone group. 1 Dexamethasone Dexamethasone PROPN NNP Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 added add VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 1 1 NUM CD NumType=Card _ _ _ _ 5 hour hour NOUN NN Number=Sing _ _ _ _ 6 before before ADP IN _ _ _ _ _ 7 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 8 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 12 group group NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 6869 # text = After stimulation, neutrophils separated from a healthy human volunteer were added with or without anti-CD18 antibody. 1 After after ADP IN _ _ _ _ _ 2 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 5 separated separate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 volunteer volunteer NOUN NN Number=Sing _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 added add VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 without without ADP IN _ _ _ _ _ 16 anti-CD18 anti-CD18 NUM CD NumType=Card _ _ _ _ 17 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 6870 # text = The culture plate was settled for 15 minutes at 37 degrees C, and then neutrophils were activated by N-formyl-methionyl-leucyl-phenylalanine for 5 minutes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 culture culture NOUN NN Number=Sing _ _ _ _ 3 plate plate NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 settled settle VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 15 15 NUM CD NumType=Card _ _ _ _ 8 minutes minute NOUN NNS Number=Plur _ _ _ _ 9 at at ADP IN _ _ _ _ _ 10 37 37 NUM CD NumType=Card _ _ _ _ 11 degrees degree NOUN NNS Number=Plur _ _ _ _ 12 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 then then ADV RB PronType=Dem _ _ _ _ 16 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 17 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 N- N- SYM SYM _ _ _ _ SpaceAfter=No 21 formyl-methionyl-leucyl-phenylalanine formyl-methionyl-leucyl-phenylalanine NUM CD NumType=Card _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 5 5 NUM CD NumType=Card _ _ _ _ 24 minutes minute NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 6871 # text = Nonadherent neutrophils were removed by sealing and inverting the culture well. 1 Nonadherent Nonadherent ADJ JJ Degree=Pos _ _ _ _ 2 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 removed remove VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by SCONJ IN _ _ _ _ _ 6 sealing seal VERB VBG VerbForm=Ger _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 inverting invert VERB VBG VerbForm=Ger _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 culture culture NOUN NN Number=Sing _ _ _ _ 11 well well ADV RB Degree=Pos _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 6872 # text = The intracellular localization of NFkappaB after TNFalpha simulation was determined by confocal immunocytochemistry using an anti-p65 antibody. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 3 localization localization NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 6 after after ADP IN _ _ _ _ _ 7 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 8 simulation simulation NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 confocal confocal ADJ JJ Degree=Pos _ _ _ _ 13 immunocytochemistry immunocytochemistry NOUN NN Number=Sing _ _ _ _ 14 using use VERB VBG VerbForm=Ger _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 anti-p65 anti-p65 NUM CD NumType=Card _ _ _ _ 17 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 6873 # text = RESULTS: Neutrophil adhesion to cultured corneal endothelial cells increased significantly on exposure to TNFalpha (451.4+/-45.4 cells/mm2, n = 16) compared to control (156.7+/-27.3 cells/mm2, n = 16, P < 0.01). 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Neutrophil Neutrophil ADJ JJ Degree=Pos _ _ _ _ 4 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 cultured culture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 corneal corneal NOUN NN Number=Sing _ _ _ _ 8 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 significantly significantly ADV RB _ _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 exposure exposure NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 451.4+/-45.4 451.4+/-45.4 NUM CD NumType=Card _ _ _ _ 18 cells/mm2 cells/mm2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 n not NOUN NN Number=Sing _ _ _ _ 21 = = SYM SYM _ _ _ _ _ 22 16 16 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 control control NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 156.7+/-27.3 156.7+/-27.3 NUM CD NumType=Card _ _ _ _ 29 cells/mm2 cells/mm2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 n not NOUN NN Number=Sing _ _ _ _ 32 = = SYM SYM _ _ _ _ _ 33 16 16 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 P p NOUN NN Number=Sing _ _ _ _ 36 < < PUNCT -LRB- _ _ _ _ _ 37 0.01 0.01 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 6874 # text = This increased adhesion was suppressed by the addition of anti-CD18 antibody (157.6+/-25.1 cells/mm2, n = 8, P < 0.01) and by pretreatment with 10(-7) M dexamethasone (207.9+/-31.5 cells/mm2, n = 10, P < 0.01). 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 increased increased VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 addition addition NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 anti-CD anti-cd ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 18 18 NUM CD NumType=Card _ _ _ _ 12 antibody antibody NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 157.6+/-25.1 157.6+/-25.1 NUM CD NumType=Card _ _ _ _ 15 cells/mm2 cells/mm2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 n not NOUN NN Number=Sing _ _ _ _ 18 = = SYM SYM _ _ _ _ _ 19 8 8 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 P P NOUN NN Number=Sing _ _ _ _ 22 < < PUNCT -LRB- _ _ _ _ _ 23 0.01 0.01 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 pretreatment pretreatment NOUN NN Number=Sing _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 (- (- PUNCT . _ _ _ _ SpaceAfter=No 31 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 M m NOUN NN Number=Sing _ _ _ _ 34 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 207.9+/-31.5 207.9+/-31.5 NUM CD NumType=Card _ _ _ _ 37 cells/ cells/ SYM SYM _ _ _ _ SpaceAfter=No 38 mm2 mm2 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 n not NOUN NN Number=Sing _ _ _ _ 41 = = SYM SYM _ _ _ _ _ 42 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 P p NOUN NN Number=Sing _ _ _ _ 45 < < PUNCT -LRB- _ _ _ _ _ 46 0.01 0.01 NUM CD NumType=Card _ _ _ SpaceAfter=No 47 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 6875 # text = Immunocytochemistry 60 minutes after stimulation revealed that NFkappaB was located in the cytoplasm in unstimulated cells; however, the addition of TNFalpha caused NFkappaB to translocate into the nucleus. 1 Immunocytochemistry Immunocytochemistry PROPN NNP Number=Sing _ _ _ _ 2 60 60 NUM CD NumType=Card _ _ _ _ 3 minutes minute NOUN NNS Number=Plur _ _ _ _ 4 after after ADP IN _ _ _ _ _ 5 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 6 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 ; ; PUNCT , _ _ _ _ _ 18 however however ADV RB _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 addition addition NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 24 caused cause VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 translocate translocate VERB VB VerbForm=Inf _ _ _ _ 28 into into ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 6876 # text = Pretreatment with dexamethasone tapered NFkappaB translocation into the nucleus. 1 Pretreatment Pretreatment NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 4 tapered taper VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 NFkappaB Nfkappab PROPN NNP Number=Sing _ _ _ _ 6 translocation translocation NOUN NN Number=Sing _ _ _ _ 7 into into ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 6877 # text = CONCLUSIONS: Leukocyte adhesion to the corneal endothelium was shown to be mediated by CD18 expressed on activated leukocytes. 1 CONCLUSIONS conclusion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Leukocyte Leukocyte ADJ JJ Degree=Pos _ _ _ _ 4 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 corneal corneal ADJ JJ Degree=Pos _ _ _ _ 8 endothelium endothelium NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 18 18 NUM CD NumType=Card _ _ _ _ 17 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 6878 # text = Pretreatment of the endothelium with dexamethasone inhibited leukocyte adhesion; this may be due in part to the suppression of NFkappaB entry into the nucleus. 1 Pretreatment Pretreatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 endothelium endothelium NOUN NN Number=Sing _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 7 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 9 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ; ; PUNCT , _ _ _ _ _ 11 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 12 may may AUX MD VerbForm=Fin _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 due due ADP IN _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 part part NOUN NN Number=Sing _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 suppression suppression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 22 entry entry NOUN NN Number=Sing _ _ _ _ 23 into into ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6879 # text = Document 003001885 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001885 003001885 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6880 # text = The B cell-specific nuclear factor OTF-2 positively regulates transcription of the human class II transplantation gene, DRA. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 B b NOUN NN Number=Sing _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT : _ _ _ _ SpaceAfter=No 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 OTF Otf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT : _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 positively positively ADV RB _ _ _ _ _ 12 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 class class NOUN NN Number=Sing _ _ _ _ 18 II ii NUM CD NumType=Card _ _ _ _ 19 transplantation transplantation NOUN NN Number=Sing _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 DRA DRA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6881 # text = The promoter of the major histocompatibility class II gene DRA contains an octamer element (ATTTGCAT) that is required for efficient DRA expression in B cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 promoter promoter NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 major major ADJ JJ Degree=Pos _ _ _ _ 6 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 7 class class NOUN NN Number=Sing _ _ _ _ 8 II ii NUM CD NumType=Card _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 DRA DRa PROPN NNP Number=Sing _ _ _ _ 11 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 octamer octamer NOUN NN Number=Sing _ _ _ _ 14 element element NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 ATTTGCAT ATTTGCAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 23 DRA DRa PROPN NNP Number=Sing _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 B b ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 6882 # text = Several DNA-binding proteins are known to bind this sequence. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 bind bind VERB VB VerbForm=Inf _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 6883 # text = The best characterized are the B cell-specific OTF-2 and the ubiquitous OTF-1. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 best best ADJ JJS Degree=Sup _ _ _ _ 3 characterized characterize NOUN NN Number=Sing _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 B b PROPN NNP Number=Sing _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 OTF Otf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 16 OTF OTF NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 6884 # text = This report directly demonstrates that OTF-2 but not OTF-1 regulates the DRA gene. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 report report NOUN NN Number=Sing _ _ _ _ 3 directly directly ADV RB _ _ _ _ _ 4 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 OTF Otf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 not not ADV RB _ _ _ _ _ 11 OTF Otf ADV RB _ _ _ _ SpaceAfter=No 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 DRA DRa PROPN NNP Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 6885 # text = In vitro transcription analysis using protein fractions enriched for the octamer-binding protein OTF-2 demonstrate a positive functional role for OTF-2 in DRA gene transcription. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 using use VERB VBG VerbForm=Ger _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 fractions fraction NOUN NNS Number=Plur _ _ _ _ 8 enriched enrich VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 binding binding VERB VBG VerbForm=Ger _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 OTF Otf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 positive positive ADJ JJ Degree=Pos _ _ _ _ 21 functional functional ADJ JJ Degree=Pos _ _ _ _ 22 role role NOUN NN Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 OTF OTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 DRA DRA PROPN NNP Number=Sing _ _ _ _ 29 gene gene NOUN NN Number=Sing _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 6886 # text = In contrast, OTF-1-enriched protein fractions did not affect DRA gene transcription although it functionally enhanced the transcription of another gene. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 OTF OTF NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 enriched enrich VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 fractions fraction NOUN NNS Number=Plur _ _ _ _ 11 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 affect affect VERB VB VerbForm=Inf _ _ _ _ 14 DRA DRa PROPN NNP Number=Sing _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 although although SCONJ IN _ _ _ _ _ 18 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 19 functionally functionally ADV RB _ _ _ _ _ 20 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 another another DET DT _ _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 6887 # text = Recombinant OTF-2 protein produced by in vitro transcription/translation could also enhance DRA gene transcription in vitro. 1 Recombinant Recombinant NOUN NN Number=Sing _ _ _ _ 2 OTF OTF NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 vitro vitro NOUN NN Number=Sing _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 translation translation NOUN NN Number=Sing _ _ _ _ 13 could could AUX MD VerbForm=Fin _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 16 DRA DRa PROPN NNP Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 6888 # text = In vivo transient transfection studies utilizing an OTF-2 expression vector resulted in similar findings: that OTF-2 protein enhanced DRA gene transcription, and that this effect requires an intact octamer element. 1 In in ADP IN _ _ _ _ _ 2 vivo vivo ADJ JJ Degree=Pos _ _ _ _ 3 transient transient ADJ JJ Degree=Pos _ _ _ _ 4 transfection transfection NOUN NN Number=Sing _ _ _ _ 5 studies study NOUN NNS Number=Plur _ _ _ _ 6 utilizing utilize VERB VBG VerbForm=Ger _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 OTF OTF NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 vector vector NOUN NN Number=Sing _ _ _ _ 13 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 similar similar ADJ JJ Degree=Pos _ _ _ _ 16 findings finding NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 : : PUNCT : _ _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 OTF OTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 DRA DRA PROPN NNP Number=Sing _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 that that SCONJ IN _ _ _ _ _ 30 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 31 effect effect NOUN NN Number=Sing _ _ _ _ 32 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 intact intact ADJ JJ Degree=Pos _ _ _ _ 35 octamer octamer NOUN NN Number=Sing _ _ _ _ 36 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 6889 # text = Together these results constitute the first direct evidence of a positive role for the lymphoid-specific octamer-binding factor in DRA gene transcription. 1 Together together SCONJ IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 results result NOUN NNS Number=Plur _ _ _ _ 4 constitute constitute VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 first first ADV RBS _ _ _ _ _ 7 direct direct ADJ JJ Degree=Pos _ _ _ _ 8 evidence evidence NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 positive positive ADJ JJ Degree=Pos _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 binding binding VERB VBG VerbForm=Ger _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 DRA DRA PROPN NNP Number=Sing _ _ _ _ 24 gene gene PROPN NNP Number=Sing _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6890 # text = Document 003001888 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001888 003001888 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6891 # text = Modulation of the expression of the IFN-gamma receptor beta-chain controls responsiveness to IFN-gamma in human peripheral blood T cells. 1 Modulation Modulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 gamma gamma NOUN NN Number=Sing _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 chain chain NOUN NN Number=Sing _ _ _ _ 14 controls controls NOUN NN Number=Sing _ _ _ _ 15 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 gamma gamma NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 23 blood blood NOUN NN Number=Sing _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6892 # text = IFN-gamma has potent antiproliferative and apoptotic effects in T cells that are important in determining T cell development and polarized differentiation. 1 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 gamma gamma NOUN NN Number=Sing _ _ _ _ 4 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 potent potent ADJ JJ Degree=Pos _ _ _ _ 6 antiproliferative antiproliferative ADJ JJ Degree=Pos _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 9 effects effect NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 important important ADJ JJ Degree=Pos _ _ _ _ 16 in in SCONJ IN _ _ _ _ _ 17 determining determine VERB VBG VerbForm=Ger _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 development development NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 polarized polarize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 6893 # text = Therefore, any event that enables T cells to become less responsive to IFN- gamma may potentially alter immune responsiveness to Ag. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 any any DET DT _ _ _ _ _ 4 event event NOUN NN Number=Sing _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 enables enable VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 become become VERB VB VerbForm=Inf _ _ _ _ 11 less less ADV RBR Degree=Cmp _ _ _ _ 12 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 IFN Ifn ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ _ 16 gamma gamma NOUN NN Number=Sing _ _ _ _ 17 may may AUX MD VerbForm=Fin _ _ _ _ 18 potentially potentially ADV RB _ _ _ _ _ 19 alter alter VERB VB VerbForm=Inf _ _ _ _ 20 immune immune ADJ JJ Degree=Pos _ _ _ _ 21 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 Ag ag PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 6894 # text = In this work, we show that human peripheral blood T cells that are stimulated through the TCR and expanded with IL-2 are unresponsive to IFN-gamma, as determined by a lack of activation of jak kinases and the transcription factor, STAT1(alpha), a signal transducer and activator of transcription. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 work work NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 10 blood blood NOUN NN Number=Sing _ _ _ _ 11 T t NOUN NN Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 through through ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 TCR Tcr NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 expanded expand VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 unresponsive unresponsive ADJ JJ Degree=Pos _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 as as SCONJ IN _ _ _ _ _ 33 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 lack lack NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 activation activation NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 jak jak ADJ JJ Degree=Pos _ _ _ _ 41 kinases kinase NOUN NNS Number=Plur _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 transcription transcription NOUN NN Number=Sing _ _ _ _ 45 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 STAT1 stat1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 alpha alpha X FW Foreign=Yes _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 51 , , PUNCT , _ _ _ _ _ 52 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 53 signal signal ADJ JJ Degree=Pos _ _ _ _ 54 transducer transducer NOUN NN Number=Sing _ _ _ _ 55 and and CCONJ CC _ _ _ _ _ 56 activator activator NOUN NN Number=Sing _ _ _ _ 57 of of ADP IN _ _ _ _ _ 58 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 6895 # text = This nonresponsiveness occurs because of a lack of expression of the beta- chain (accessory factor) of the IFN-gamma receptor, while at the same time maintaining IFN-gamma receptor alpha-chain expression. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 nonresponsiveness nonresponsiveness NOUN NN Number=Sing _ _ _ _ 3 occurs occur ADV RB _ _ _ _ _ 4 because because ADP IN _ _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 lack lack NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ _ 14 chain chain NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 accessory accessory ADJ JJ Degree=Pos _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 gamma gamma NOUN NN Number=Sing _ _ _ _ 24 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 while while SCONJ IN _ _ _ _ _ 27 at at ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 same same ADJ JJ Degree=Pos _ _ _ _ 30 time time NOUN NN Number=Sing _ _ _ _ 31 maintaining maintain VERB VBG VerbForm=Ger _ _ _ _ 32 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 gamma gamma NOUN NN Number=Sing _ _ _ _ 35 receptor receptor NOUN NN Number=Sing _ _ _ _ 36 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 chain chain NOUN NN Number=Sing _ _ _ _ 39 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 6896 # text = Expression of the beta-chain can be restored by secondary TCR ligation or PMA treatment. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 chain chain NOUN NN Number=Sing _ _ _ _ 7 can can AUX MD VerbForm=Fin _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 restored restore VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 secondary secondary ADJ JJ Degree=Pos _ _ _ _ 12 TCR Tcr NOUN NN Number=Sing _ _ _ _ 13 ligation ligation NOUN NN Number=Sing _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 PMA Pma DET DT Definite=Ind|PronType=Art _ _ _ _ 16 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 6897 # text = T cell blasts treated with PMA are now responsive to IFN-gamma. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 blasts blast NOUN NNS Number=Plur _ _ _ _ 4 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 PMA PMA PROPN NNP Number=Sing _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 now now ADV RB _ _ _ _ _ 9 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 gamma gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 6898 # text = When freshly isolated, highly enriched (>98%) T cells are examined for IFN-gamma responsiveness; these cells can respond to IFN-gamma and express beta-chain. 1 When when ADV WRB PronType=Int _ _ _ _ 2 freshly freshly ADV RB _ _ _ _ _ 3 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 highly highly ADV RB _ _ _ _ _ 6 enriched enrich VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 >98 >98 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 gamma gamma NOUN NN Number=Sing _ _ _ _ 19 responsiveness responsiveness NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ; ; PUNCT , _ _ _ _ _ 21 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 can can AUX MD VerbForm=Fin _ _ _ _ 24 respond respond VERB VB VerbForm=Inf _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 gamma gamma NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 express express ADJ JJ Degree=Pos _ _ _ _ 31 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 chain chain NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 6899 # text = Therefore, as T cells progress from primary TCR activation through IL-2-dependent proliferation, followed by secondary TCR stimulation, their responsiveness to IFN-gamma varies, and this may affect their ability to participate in an ongoing immune response. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 as as SCONJ IN _ _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 progress progress VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 primary primary ADJ JJ Degree=Pos _ _ _ _ 9 TCR Tcr NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 through through ADP IN _ _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 17 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 secondary secondary ADJ JJ Degree=Pos _ _ _ _ 22 TCR Tcr NOUN NN Number=Sing _ _ _ _ 23 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 26 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 gamma gamma NOUN NN Number=Sing _ _ _ _ 31 varies varies NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 35 may may AUX MD VerbForm=Fin _ _ _ _ 36 affect affect VERB VB VerbForm=Inf _ _ _ _ 37 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 38 ability ability NOUN NN Number=Sing _ _ _ _ 39 to to PART TO _ _ _ _ _ 40 participate participate VERB VB VerbForm=Inf _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 ongoing ongoing ADJ JJ Degree=Pos _ _ _ _ 44 immune immune ADJ JJ Degree=Pos _ _ _ _ 45 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6900 # text = Document 003001890 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001890 003001890 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6901 # text = Regulation of gene expression with double-stranded phosphorothioate oligonucleotides. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 stranded strand VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 phosphorothioate phosphorothioate NOUN NN Number=Sing _ _ _ _ 10 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6902 # text = Alteration of gene transcription by inhibition of specific transcriptional regulatory proteins is necessary for determining how these factors participate in cellular differentiation. 1 Alteration Alteration NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 10 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 14 for for SCONJ IN _ _ _ _ _ 15 determining determine VERB VBG VerbForm=Ger _ _ _ _ 16 how how ADV WRB PronType=Int _ _ _ _ 17 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 18 factors factor NOUN NNS Number=Plur _ _ _ _ 19 participate participate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 22 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 6903 # text = The functions of these proteins can be antagonized by several methods, each with specific limitations. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 functions function NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ _ 6 can can AUX MD VerbForm=Fin _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 antagonized antagonize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 several several ADJ JJ Degree=Pos _ _ _ _ 11 methods method NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 each each DET DT _ _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 specific specific ADJ JJ Degree=Pos _ _ _ _ 16 limitations limitation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 6904 # text = Inhibition of sequence-specific DNA-binding proteins was achieved with double-stranded (ds) phosphorothioate oligonucleotides that contained octamer or kappa B consensus sequences. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 achieved achieve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 stranded strand VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 ds d NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 phosphorothioate phosphorothioate NOUN NN Number=Sing _ _ _ _ 20 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 21 that that PRON WDT PronType=Rel _ _ _ _ 22 contained contain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 octamer octamer NOUN NN Number=Sing _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 consensus consensus NOUN NN Number=Sing _ _ _ _ 28 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 6905 # text = The phosphorothioate oligonucleotides specifically bound either octamer transcription factor or nuclear factor (NF)-kappa B. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 phosphorothioate phosphorothioate NOUN NN Number=Sing _ _ _ _ 3 oligonucleotides oligonucleotide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 specifically specifically ADV RB _ _ _ _ _ 5 bound bound ADJ JJ Degree=Pos _ _ _ _ 6 either either CCONJ CC _ _ _ _ _ 7 octamer octamer ADJ JJ Degree=Pos _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 6906 # text = The modified oligonucleotides accumulated in cells more effectively than standard ds oligonucleotides and modulated gene expression in a specific manner. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 modified modify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 4 accumulated accumulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 more more ADV RBR _ _ _ _ _ 8 effectively effectively ADV RB _ _ _ _ _ 9 than than ADP IN _ _ _ _ _ 10 standard standard ADJ JJ Degree=Pos _ _ _ _ 11 ds d NOUN NNS Number=Plur _ _ _ _ 12 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 modulated modulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 6907 # text = Octamer-dependent activation of a reporter plasmid or NF-kappa B-dependent activation of the human immunodeficiency virus (HIV) enhancer was inhibited when the appropriate phosphorothioate oligonucleotide was added to a transiently transfected B cell line. 1 Octamer Octamer ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 reporter reporter NOUN NN Number=Sing _ _ _ _ 8 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 21 virus virus NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 when when ADV WRB PronType=Int _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 appropriate appropriate ADJ JJ Degree=Pos _ _ _ _ 31 phosphorothioate phosphorothioate NOUN NN Number=Sing _ _ _ _ 32 oligonucleotide oligonucleotide NOUN NN Number=Sing _ _ _ _ 33 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 34 added add VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 transiently transiently ADV RB _ _ _ _ _ 38 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 B b ADJ JJ Degree=Pos _ _ _ _ 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 6908 # text = Addition of phosphorothioate oligonucleotides that contained the octamer consensus to Jurkat T leukemia cells inhibited interleukin-2 (IL-2) secretion to a degree similar to that observed with a mutated octamer site in the IL-2 enhancer. 1 Addition Addition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 phosphorothioate phosphorothioate ADJ JJ Degree=Pos _ _ _ _ 4 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 contained contain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 octamer octamer NOUN NN Number=Sing _ _ _ _ 9 consensus consensus NOUN NN Number=Sing _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 12 T T PROPN NNP Number=Sing _ _ _ _ 13 leukemia leukemia PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 secretion secretion NOUN NN Number=Sing _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 degree degree NOUN NN Number=Sing _ _ _ _ 28 similar similar ADJ JJ Degree=Pos _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 31 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 octamer octamer NOUN NN Number=Sing _ _ _ _ 36 site site NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 2 2 NUM CD NumType=Card _ _ _ _ 42 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 6909 # text = The ds phosphorothioate oligonucleotides probably compete for binding of specific transcription factors and may provide anti-viral, immunosuppressive, or other therapeutic effects. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ds d NOUN NNS Number=Plur _ _ _ _ 3 phosphorothioate phosphorothioate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 5 probably probably ADV RB _ _ _ _ _ 6 compete compete ADJ JJ Degree=Pos _ _ _ _ 7 for for SCONJ IN _ _ _ _ _ 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 specific specific ADJ JJ Degree=Pos _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 provide provide VERB VB VerbForm=Inf _ _ _ _ 16 anti-viral anti-viral ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 other other ADJ JJ Degree=Pos _ _ _ _ 22 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 23 effects effect NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6910 # text = Document 003001892 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001892 003001892 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6911 # text = Signals and nuclear factors that regulate the expression of interleukin-4 and interleukin-5 genes in helper T cells. 1 Signals signal NOUN NNS Number=Plur _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 factors factor NOUN NNS Number=Plur _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 4 4 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 5 5 NUM CD NumType=Card _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 helper helper ADJ JJ Degree=Pos _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6912 # text = Mouse thymoma line EL-4 cells produce cytokines such as interleukin (IL)-2, IL-3, IL-4, IL-10, and granulocyte-macrophage colony-stimulating factor in response to phorbol 12-myristate 13-acetate (PMA). 1 Mouse mouse NOUN NN Number=Sing _ _ _ _ 2 thymoma thymoma NOUN NN Number=Sing _ _ _ _ 3 line line NOUN NN Number=Sing _ _ _ _ 4 EL el NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 4 4 NUM CD NumType=Card _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 produce produce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 10 such such ADJ JJ Degree=Pos _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 35 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 38 factor factor NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 response response NOUN NN Number=Sing _ _ _ _ 41 to to PART TO _ _ _ _ _ 42 phorbol phorbol VERB VB VerbForm=Inf _ _ _ _ 43 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 myristate myristate NOUN NN Number=Sing _ _ _ _ 46 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 47 - - PUNCT : _ _ _ _ SpaceAfter=No 48 acetate acetate NOUN NN Number=Sing _ _ _ _ 49 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 50 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 6913 # text = EL-4 cells also produce low levels of IL-5 when stimulated by PMA alone; however, cAMP greatly augments PMA-dependent IL-5 production. 1 EL EL INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 produce produce VERB VB VerbForm=Inf _ _ _ _ 7 low low ADJ JJ Degree=Pos _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 5 5 NUM CD NumType=Card _ _ _ _ 13 when when ADV WRB PronType=Int _ _ _ _ 14 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 PMA PMA PROPN NNP Number=Sing _ _ _ _ 17 alone alone ADV RB _ _ _ _ SpaceAfter=No 18 ; ; PUNCT , _ _ _ _ _ 19 however however ADV RB _ _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 cAMP camp PROPN NNP Number=Sing _ _ _ _ 22 greatly greatly ADJ JJ Degree=Pos _ _ _ _ 23 augments augment NOUN NNS Number=Plur _ _ _ _ 24 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 27 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 5 5 NUM CD NumType=Card _ _ _ _ 30 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 6914 # text = A transient transfection assay revealed that two signals, PMA and cAMP, are required for optimal activation of the IL-5 promoter. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 transient transient ADJ JJ Degree=Pos _ _ _ _ 3 transfection transfection NOUN NN Number=Sing _ _ _ _ 4 assay assay NOUN NN Number=Sing _ _ _ _ 5 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 PMA PMA PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 cAMP camp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 5 5 NUM CD NumType=Card _ _ _ _ 24 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 6915 # text = In contrast, cAMP almost completely inhibited the PMA-dependent activation of the endogenous IL-2 gene, as well as the transfected IL-2 promoter. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 cAMP camp VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 5 almost almost ADV RB _ _ _ _ _ 6 completely completely ADV RB _ _ _ _ _ 7 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 16 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 as as ADV RB _ _ _ _ _ 22 well well ADV RB Degree=Pos _ _ _ _ 23 as as ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 6916 # text = These results indicate that the IL-5 gene is positively regulated by cAMP in a manner opposite to that for the IL-2 gene. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 5 5 NUM CD NumType=Card _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 positively positively ADV RB _ _ _ _ _ 12 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 cAMP camp NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 manner manner NOUN NN Number=Sing _ _ _ _ 18 opposite opposite ADJ JJ Degree=Pos _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ _ 26 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 6917 # text = One of the nuclear factors (NFs) that regulates the response of the IL-5 promoter to cAMP and PMA has properties similar to NF for activated t cell. 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factors factor NOUN NNS Number=Plur _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 NFs Nfs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 response response NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 5 5 NUM CD NumType=Card _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 cAMP camp PROPN NNP Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 PMA PMA PROPN NNP Number=Sing _ _ _ _ 23 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 properties property NOUN NNS Number=Plur _ _ _ _ 25 similar similar ADJ JJ Degree=Pos _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 NF NF VERB VB VerbForm=Inf _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 t t NOUN NN Number=Sing _ _ _ _ 31 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 6918 # text = The P sequence of the IL-4 gene, defined as a responsive element for PMA and calcium ionophore (A23187), shares sequence similarity with the NF kappa B and the NF-activated T cell binding sites. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 P p NOUN NN Number=Sing _ _ _ _ 3 sequence sequence NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 4 4 NUM CD NumType=Card _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 defined define VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 15 element element NOUN NN Number=Sing _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 PMA PMA PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 calcium calcium NOUN NN Number=Sing _ _ _ _ 20 ionophore ionophore NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 A23187 A23187 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 shares share NOUN NNS Number=Plur _ _ _ _ 26 sequence sequence NOUN NN Number=Sing _ _ _ _ 27 similarity similarity NOUN NN Number=Sing _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 NF NF PROPN NNP Number=Sing _ _ _ _ 31 kappa kappa PROPN NNP Number=Sing _ _ _ _ 32 B b PROPN NNP Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 T t PROPN NNP Number=Sing _ _ _ _ 39 cell cell VERB VB VerbForm=Inf _ _ _ _ 40 binding bind VERB VBG VerbForm=Ger _ _ _ _ 41 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 6919 # text = We attempted to determine whether NF(P), a nuclear factor specific for the P sequence, is related to NF-kappa B and nuclear factor for activated T cell (NF-AT). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 attempted attempt VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 determine determine VERB VB VerbForm=Inf _ _ _ _ 5 whether whether SCONJ IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 P P PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 specific specific ADJ JJ Degree=Pos _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 P p NOUN NN Number=Sing _ _ _ _ 18 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 related related ADJ JJ Degree=Pos _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 29 factor factor NOUN NN Number=Sing _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 T t PROPN NNP Number=Sing _ _ _ _ 33 cell cell PROPN NNP Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 AT At PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 6920 # text = In electromobility shift assays both NF-kappa B (P65 or P65/P50 heterodimer) and NF-AT bound to the P sequence. 1 In in ADP IN _ _ _ _ _ 2 electromobility electromobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assays assays NOUN NNS Number=Plur _ _ _ _ 5 both both CCONJ CC _ _ _ _ _ 6 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B B NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 P65 P65 NUM CD NumType=Card _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 P65 P65 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 / / SYM SYM _ _ _ _ SpaceAfter=No 15 P50 P50 NUM CD NumType=Card _ _ _ _ 16 heterodimer heterodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 AT AT ADV RB _ _ _ _ _ 22 bound bound ADJ JJ Degree=Pos _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 P p NOUN NN Number=Sing _ _ _ _ 26 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 6921 # text = However, sequence specificity of NF-AT was more similar to that of NF(P), and only a small amount of P65 was detected in NF(P). 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 sequence sequence NOUN NN Number=Sing _ _ _ _ 4 specificity specificity NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 AT AT PROPN NNP Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 more more ADV RBR _ _ _ _ _ 11 similar similar ADJ JJ Degree=Pos _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 P p PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 only only ADV RB _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 small small ADJ JJ Degree=Pos _ _ _ _ 24 amount amount NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 P65 P65 PROPN NNP Number=Sing _ _ _ _ 27 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 28 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 P p PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 6922 # text = These results indicate that a component or components of NF-AT have the potential to reconstitute NF(P), whereas NF-kappa B alone does not account for NF(P) in Jurkat crude extract. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 component component NOUN NN Number=Sing _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 components component NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 AT AT PRON WDT PronType=Rel _ _ _ _ 13 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 potential potential NOUN NN Number=Sing _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 reconstitute reconstitute VERB VB VerbForm=Inf _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 P P PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 whereas whereas SCONJ IN _ _ _ _ _ 24 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa NOUN NN Number=Sing _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ _ 28 alone alone ADV RB _ _ _ _ _ 29 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 not not PART RB _ _ _ _ _ 31 account account VERB VB VerbForm=Inf _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 P P PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 39 crude crude NOUN NN Number=Sing _ _ _ _ 40 extract extract NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 6923 # text = Taken together, these results suggest that NF-AT-like factors are involved in the regulation of IL-4 and IL-5 genes. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 AT AT ADV RB _ _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 like like SCONJ IN _ _ _ _ _ 13 factors factor NOUN NNS Number=Plur _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 involved involved ADJ JJ Degree=Pos _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 regulation regulation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 4 4 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 5 5 NUM CD NumType=Card _ _ _ _ 27 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6924 # text = Document 003001910 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001910 003001910 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6925 # text = Octamer transcription factors and the cell type-specificity of immunoglobulin gene expression. 1 Octamer Octamer ADJ JJ Degree=Pos _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 specificity specificity NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6926 # text = Antibodies are produced exclusively in B lymphocytes. 1 Antibodies Antibody NOUN NNS Number=Plur _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 produced produce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 exclusively exclusively ADV RB _ _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 B b ADJ JJ Degree=Pos _ _ _ _ 7 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 6927 # text = The expression of the antibody-encoding genes, the immunoglobulin 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 antibody antibody ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 encoding encoding NOUN NN Number=Sing _ _ _ _ 8 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 immunoglobulin immunoglobulin NOUN NN Number=Sing _ _ _ _ # sent_id = 6928 # text = (Ig) genes, is also restricted to B cells. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 Ig ig X ADD _ _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 restricted restrict VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 B b ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 6929 # text = The octamer sequence ATGCAAAT is present in the promoter and the enhancer of Ig genes, and plays an important role in its tissue-specific expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 octamer octamer NOUN NN Number=Sing _ _ _ _ 3 sequence sequence NOUN NN Number=Sing _ _ _ _ 4 ATGCAAAT Atgcaaat PRON WDT PronType=Rel _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 present present ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 Ig ig ADJ JJ Degree=Pos _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 important important ADJ JJ Degree=Pos _ _ _ _ 21 role role NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 specific specific ADJ JJ Degree=Pos _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 6930 # text = This sequence motif is a binding site for nuclear proteins, the so-called octamer transcription factors (Oct or OTF factors). 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 sequence sequence NOUN NN Number=Sing _ _ _ _ 3 motif motif NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 binding binding VERB VBG VerbForm=Ger _ _ _ _ 7 site site NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 so so ADV RB _ _ _ _ SpaceAfter=No 14 -called -call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 octamer octamer ADJ JJ Degree=Pos _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factors factor NOUN NNS Number=Plur _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 Oct Oct PROPN NNP Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 OTF OTF ADJ JJ Degree=Pos _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 6931 # text = The Oct-1 protein is present in all cell types analyzed so far, whereas Oct-2A and Oct-2B are found mainly in B lymphocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 present present ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 all all DET DT _ _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 types type NOUN NNS Number=Plur _ _ _ _ 12 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 so so ADV RB _ _ _ _ _ 14 far far ADV RB Degree=Pos _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 whereas whereas SCONJ IN _ _ _ _ _ 17 Oct-2A Oct-2A PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 2B 2b NOUN NN Number=Sing _ _ _ _ 22 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 mainly mainly ADV RB _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 B b ADJ JJ Degree=Pos _ _ _ _ 27 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 6932 # text = All three proteins show the same sequence specificity and binding affinity. 1 All all DET DT _ _ _ _ _ 2 three three NUM CD NumType=Card _ _ _ _ 3 proteins protein NOUN NNS Number=Plur _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 same same ADJ JJ Degree=Pos _ _ _ _ 7 sequence sequence NOUN NN Number=Sing _ _ _ _ 8 specificity specificity NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 binding binding VERB VBG VerbForm=Ger _ _ _ _ 11 affinity affinity NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 6933 # text = It appears that the B cell-specific expression of Ig genes is mediated at least in part by cell type-specific 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 Ig ig PROPN NNP Number=Sing _ _ _ _ 12 genes gene NOUN NNS Number=Plur _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 at at ADV RB _ _ _ _ _ 16 least least ADV RBS Degree=Sup _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 part part NOUN NN Number=Sing _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 specific specific ADJ JJ Degree=Pos _ _ _ _ # sent_id = 6934 # text = Oct factors, and that there are both quantitative and qualitative differences between Oct-1 and Oct-2 factors. 1 Oct Oct PROPN NNP Number=Sing _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 there there PRON EX _ _ _ _ _ 7 are be VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 both both CCONJ CC _ _ _ _ _ 9 quantitative quantitative ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 qualitative qualitative ADJ JJ Degree=Pos _ _ _ _ 12 differences difference NOUN NNS Number=Plur _ _ _ _ 13 between between ADP IN _ _ _ _ _ 14 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 -1 -1 NUM CD NumType=Card _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ _ 20 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 6935 # text = Recently, a number of other octamer factor variants were identified. 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 number number NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 other other ADJ JJ Degree=Pos _ _ _ _ 7 octamer octamer ADJ JJ Degree=Pos _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 variants variant NOUN NNS Number=Plur _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 6936 # text = Many of these may be created by alternative splicing of a primary transcript of one Oct factor gene and may serve a specific function in the fine tuning of gene expression. 1 Many many ADJ JJ Degree=Pos _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these PRON DT Number=Plur|PronType=Dem _ _ _ _ 4 may may AUX MD VerbForm=Fin _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 created create VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 9 splicing splicing NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 primary primary ADJ JJ Degree=Pos _ _ _ _ 13 transcript transcript NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 one one NUM CD NumType=Card _ _ _ _ 16 Oct Oct PROPN NNP Number=Sing _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 may may AUX MD VerbForm=Fin _ _ _ _ 21 serve serve VERB VB VerbForm=Inf _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 specific specific ADJ JJ Degree=Pos _ _ _ _ 24 function function NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 fine fine ADJ JJ Degree=Pos _ _ _ _ 28 tuning tuning NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 gene gene ADJ JJ Degree=Pos _ _ _ _ 31 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6937 # text = Document 003001916 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001916 003001916 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6938 # text = Retinoblastoma protein expression leads to reduced Oct-1 DNA binding activity and enhances interleukin-8 expression. 1 Retinoblastoma Retinoblastoma NOUN NN Number=Sing _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 reduced reduce VERB VB VerbForm=Inf _ _ _ _ 7 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ _ 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 enhances enhance NOUN NNS Number=Plur _ _ _ _ 15 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 8 8 NUM CD NumType=Card _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6939 # text = Tumor cell lines with a defective retinoblastoma gene are unable to transcribe the HLA class II genes in response to IFN-gamma treatment, and reconstitution of functional Rb rescues IFN-gamma-induced class II gene expression. 1 Tumor tumor NOUN NN Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 lines line NOUN NNS Number=Plur _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 defective defective ADJ JJ Degree=Pos _ _ _ _ 7 retinoblastoma retinoblastoma NOUN NN Number=Sing _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 unable unable ADJ JJ Degree=Pos _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 transcribe transcribe VERB VB VerbForm=Inf _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 HLA HLA PROPN NNP Number=Sing _ _ _ _ 15 class class NOUN NN Number=Sing _ _ _ _ 16 II ii NUM CD NumType=Card _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 gamma gamma NOUN NN Number=Sing _ _ _ _ 24 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 reconstitution reconstitution NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 functional functional ADJ JJ Degree=Pos _ _ _ _ 30 Rb Rb PROPN NNP Number=Sing _ _ _ _ 31 rescues rescue VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 IFN-gamma IFN-gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 class class NOUN NN Number=Sing _ _ _ _ 36 II ii NUM CD NumType=Card _ _ _ _ 37 gene gene NOUN NN Number=Sing _ _ _ _ 38 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 6940 # text = However, the molecular mechanism of Rb rescue of the class II genes is unknown. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 5 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Rb Rb PROPN NNP Number=Sing _ _ _ _ 8 rescue rescue NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 class class NOUN NN Number=Sing _ _ _ _ 12 II ii NUM CD NumType=Card _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 6941 # text = We have examined the effect of Rb expression on the activation of the promoter for HLA-DRA, the prototype class II gene. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Rb Rb PROPN NNP Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 DRA DRA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 prototype prototype NOUN NN Number=Sing _ _ _ _ 22 class class NOUN NN Number=Sing _ _ _ _ 23 II ii NUM CD NumType=Card _ _ _ _ 24 gene. gene. NOUN NN Number=Sing _ _ _ _ # sent_id = 6942 # text = Oct-1, a POU domain transcription factor, was identified as a repressor of HLA-DRA promoter activity in the Rb-defective cells. 1 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 POU POU NOUN NN Number=Sing _ _ _ _ 6 domain domain NOUN NN Number=Sing _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 repressor repressor NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 DRA DRA PROPN NNP Number=Sing _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 Rb- Rb- SYM NFP _ _ _ _ SpaceAfter=No 24 defective defective ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 6943 # text = Rb expression led to phosphorylation of Oct-1, thus relieving its repressive effect. Oct-1 has also been shown to repress interleukin 8 promoter activity. 1 Rb Rb PROPN NNP Number=Sing _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 thus thus ADV RB _ _ _ _ _ 11 relieving relieve VERB VBG VerbForm=Ger _ _ _ _ 12 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 repressive repressive ADJ JJ Degree=Pos _ _ _ _ 14 effect. effect NOUN NN Number=Sing _ _ _ _ 15 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 also also ADV RB _ _ _ _ _ 20 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 21 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 repress repress VERB VB VerbForm=Inf _ _ _ _ 24 interleukin interleukin ADV RB _ _ _ _ _ 25 8 8 NUM CD NumType=Card _ _ _ _ 26 promoter promoter NOUN NN Number=Sing _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 6944 # text = Consistent with reduced levels of Oct-1 DNA binding activity in the Rb-transformed cell lines, interleukin 8 expression is higher in these cell lines. 1 Consistent consistent ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 levels level NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 -1 -1 NUM CD NumType=Card _ _ _ _ 8 DNA dna NOUN NN Number=Sing _ _ _ _ 9 binding binde VERB VBG VerbForm=Ger _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 Rb- rb- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 interleukin interleukin ADJ JJ Degree=Pos _ _ _ _ 19 8 8 NUM CD NumType=Card _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 higher higher ADJ JJR Degree=Cmp _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6945 # text = Document 003001917 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001917 003001917 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6946 # text = Inhibitor (IK) of IFN-gamma induced HLA class II antigens expression also inhibits HLA class II constitutive expression in the human Raji B cell line. 1 Inhibitor Inhibitor PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 IK IK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 gamma gamma NOUN NN Number=Sing _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 HLA HLA PROPN NNP Number=Sing _ _ _ _ 11 class class NOUN NN Number=Sing _ _ _ _ 12 II ii NUM CD NumType=Card _ _ _ _ 13 antigens antigen NOUN NNS Number=Plur _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 also also ADV RB _ _ _ _ _ 16 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 HLA Hla PROPN NNP Number=Sing _ _ _ _ 18 class class NOUN NN Number=Sing _ _ _ _ 19 II ii NUM CD NumType=Card _ _ _ _ 20 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 Raji Raji PROPN NNP Number=Sing _ _ _ _ 26 B b PROPN NNP Number=Sing _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6947 # text = The expression of major histocompatibility complex (MHC) class II antigens is constitutive in professional antigen presenting cells (APCs) but can also be induced by interferon-gamma (IFN-gamma) on the majority of the non professional APCs (e.g. fibroblasts). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 major major ADJ JJ Degree=Pos _ _ _ _ 5 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 6 complex complex NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 MHC MHC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 class class NOUN NN Number=Sing _ _ _ _ 11 II ii NUM CD NumType=Card _ _ _ _ 12 antigens antigen NOUN NNS Number=Plur _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 professional professional ADJ JJ Degree=Pos _ _ _ _ 17 antigen antigen NOUN NNS Number=Plur _ _ _ _ 18 presenting presenting VERB VBG VerbForm=Ger _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 APCs APC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 but but CCONJ CC _ _ _ _ _ 24 can can AUX MD VerbForm=Fin _ _ _ _ 25 also also ADV RB _ _ _ _ _ 26 be be AUX VB VerbForm=Inf _ _ _ _ 27 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 gamma gamma NOUN NN Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 on on ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 majority majority NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 non non X AFX _ _ _ _ _ 43 professional professional ADJ JJ Degree=Pos _ _ _ _ 44 APCs APC NOUN NNS Number=Plur _ _ _ _ 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 e.g. e.g. X FW _ _ _ _ _ 47 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 6948 # text = We have recently characterised a new factor called IK which is an efficient inhibitor of IFN-gamma induction of MHC class II antigens expression. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 recently recently ADV RB _ _ _ _ _ 4 characterised characterise VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 new new ADJ JJ Degree=Pos _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 IK IK PROPN NNP Number=Sing _ _ _ _ 10 which which PRON WDT PronType=Rel _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 14 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 gamma gamma NOUN NN Number=Sing _ _ _ _ 19 induction induction NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 MHC MHC PROPN NNP Number=Sing _ _ _ _ 22 class class NOUN NN Number=Sing _ _ _ _ 23 II ii NUM CD NumType=Card _ _ _ _ 24 antigens antigen NOUN NNS Number=Plur _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 6949 # text = Here, we demonstrate a novel role for IK in MHC class II expression since over-expression of this protein by stable transfection into human B cells led to a total disappearance of constitutive MHC class II mRNA expression. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 novel novel NOUN NN Number=Sing _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 IK IK PROPN NNP Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 MHC MHC PROPN NNP Number=Sing _ _ _ _ 12 class class NOUN NN Number=Sing _ _ _ _ 13 II ii NUM CD NumType=Card _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 since since ADP IN _ _ _ _ _ 16 over over ADP IN _ _ _ _ SpaceAfter=No 17 -expression -expression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 stable stable ADJ JJ Degree=Pos _ _ _ _ 23 transfection transfection NOUN NN Number=Sing _ _ _ _ 24 into into ADP IN _ _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 B b ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 total total ADJ JJ Degree=Pos _ _ _ _ 32 disappearance disappearance NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 35 MHC MHC PROPN NNP Number=Sing _ _ _ _ 36 class class NOUN NN Number=Sing _ _ _ _ 37 II ii NUM CD NumType=Card _ _ _ _ 38 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 39 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 6950 # text = The class II transactivator (CIITA) is necessary for both constitutive and IFN-gamma induced MHC class II expressions. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 class class NOUN NN Number=Sing _ _ _ _ 3 II ii NUM CD NumType=Card _ _ _ _ 4 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 both both CCONJ CC _ _ _ _ _ 12 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 IFN Ifn ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 gamma gamma NOUN NN Number=Sing _ _ _ _ 17 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 MHC MHC PROPN NNP Number=Sing _ _ _ _ 19 class class NOUN NN Number=Sing _ _ _ _ 20 II ii NUM CD NumType=Card _ _ _ _ 21 expressions expression NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 6951 # text = Examination of CIITA mRNA in IK stably transfected clones revealed a marked reduction of CIITA mRNA transcription. 1 Examination examination NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 4 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 IK IK PROPN NNP Number=Sing _ _ _ _ 7 stably stably ADV RB _ _ _ _ _ 8 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 clones clone NOUN NNS Number=Plur _ _ _ _ 10 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 reduction reduction NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 16 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 6952 # text = Taken together these results demonstrate that the IK protein plays a key role in the constitutive expression of MHC class II antigens and that inhibition induced by IK is upstream of CIITA in this regulatory pathway. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 IK IK PROPN NNP Number=Sing _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 key key ADJ JJ Degree=Pos _ _ _ _ 13 role role NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 MHC MHC PROPN NNP Number=Sing _ _ _ _ 20 class class NOUN NN Number=Sing _ _ _ _ 21 II ii NUM CD NumType=Card _ _ _ _ 22 antigens antigen NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 25 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 26 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 IK IK PROPN NNP Number=Sing _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 35 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 36 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6953 # text = Document 003001925 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001925 003001925 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6954 # text = Epstein-Barr virus binding to CD21 activates the initial viral promoter via NF-kappaB induction. 1 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 Barr Barr PROPN NNP Number=Sing _ _ _ _ 4 virus virus NOUN NN Number=Sing _ _ _ _ 5 binding bind VERB VBG VerbForm=Ger _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 CD21 CD21 PROPN NNP Number=Sing _ _ _ _ 8 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 initial initial ADJ JJ Degree=Pos _ _ _ _ 11 viral viral ADJ JJ Degree=Pos _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 via via ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 17 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6955 # text = Epstein-Barr virus (EBV), an oncogenic human herpesvirus, binds to and infects normal human B lymphocytes via CD21, the CR2 complement receptor. 1 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 Barr Barr PROPN NNP Number=Sing _ _ _ _ 4 virus virus NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 oncogenic oncogenic ADJ JJ Degree=Pos _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 herpesvirus herpesvirus NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 infects infect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 normal normal ADJ JJ Degree=Pos _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 via via ADP IN _ _ _ _ _ 23 CD21 CD21 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 CR2 Cr2 NOUN NN Number=Sing _ _ _ _ 27 complement complement NOUN NN Number=Sing _ _ _ _ 28 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 6956 # text = Studies of the mechanisms that enable EBV to infect nonactivated, noncycling B cells provide compelling evidence for a sequence of events in which EBV binding to CD21 on purified resting human B cells rapidly activates the NF-kappaB transcription factor, which, in turn, binds to and mediates transcriptional activation of Wp, the initial viral latent gene promoter. 1 Studies study NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 enable enable VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 EBV EBV PROPN NNP Number=Sing _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 infect infect VERB VB VerbForm=Inf _ _ _ _ 10 nonactivated nonactivate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 noncycling noncycl VERB VBG VerbForm=Ger _ _ _ _ 13 B b ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 compelling compelling ADJ JJ Degree=Pos _ _ _ _ 17 evidence evidence NOUN NN Number=Sing _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 sequence sequence NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 events event NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 EBV EBV PROPN NNP Number=Sing _ _ _ _ 26 binding bind VERB VBG VerbForm=Ger _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 CD21 CD21 PROPN NNP Number=Sing _ _ _ _ 29 on on ADV RB _ _ _ _ _ 30 purified purify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 resting rest VERB VBG VerbForm=Ger _ _ _ _ 32 human human ADJ JJ Degree=Pos _ _ _ _ 33 B b NOUN NN Number=Sing _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ _ 35 rapidly rapidly ADV RB _ _ _ _ _ 36 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 41 transcription transcription NOUN NN Number=Sing _ _ _ _ 42 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 which which PRON WDT PronType=Rel _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 turn turn NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 binds bind NOUN NNS Number=Plur _ _ _ _ 50 to to ADP IN _ _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 53 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 54 activation activation NOUN NN Number=Sing _ _ _ _ 55 of of ADP IN _ _ _ _ _ 56 Wp Wp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 57 , , PUNCT , _ _ _ _ _ 58 the the DET DT Definite=Def|PronType=Art _ _ _ _ 59 initial initial ADJ JJ Degree=Pos _ _ _ _ 60 viral viral ADJ JJ Degree=Pos _ _ _ _ 61 latent latent ADJ JJ Degree=Pos _ _ _ _ 62 gene gene NOUN NN Number=Sing _ _ _ _ 63 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 64 . . PUNCT . _ _ _ _ _ # sent_id = 6957 # text = Thus, EBV binding to its cellular receptor on resting B cells triggers an NF-kappaB-dependent intracellular signaling pathway which is required for infection. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 EBV EBV PROPN NNP Number=Sing _ _ _ _ 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 7 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 on on SCONJ IN _ _ _ _ _ 10 resting rest VERB VBG VerbForm=Ger _ _ _ _ 11 B b ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 triggers trigger NOUN NNS Number=Plur _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 20 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 21 signaling signaling NOUN NN Number=Sing _ _ _ _ 22 pathway pathway NOUN NN Number=Sing _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6958 # text = Document 003001926 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001926 003001926 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6959 # text = PPARgamma activation induces the expression of the adipocyte fatty acid binding protein gene in human monocytes. 1 PPARgamma PPARgamma PROPN NNP Number=Sing _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 adipocyte adipocyte ADJ JJ Degree=Pos _ _ _ _ 9 fatty fatty NOUN NN Number=Sing _ _ _ _ 10 acid acid VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6960 # text = The peroxisome-proliferator activated receptor gamma (PPARgamma), a member of the nuclear receptor superfamily of ligand activated transcription factors, plays a key role in the anti-diabetic actions of the thiazolidinediones (TZDs). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 peroxisome peroxisome NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 proliferator proliferator NOUN NN Number=Sing _ _ _ _ 5 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 gamma gamma NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 PPARgamma PPARgamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 member member NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 superfamily superfamily NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 ligand ligand NOUN NN Number=Sing _ _ _ _ 21 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 key key ADJ JJ Degree=Pos _ _ _ _ 28 role role NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 anti-diabetic anti-diabetic ADJ JJ Degree=Pos _ _ _ _ 32 actions action NOUN NNS Number=Plur _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 thiazolidinediones thiazolidinedione NOUN NNS Number=Plur _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 TZDs Tzds NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 6961 # text = PPARgamma induces the expression of many genes involved in lipid anabolism, including the adipocyte fatty acid binding protein (aP2), and is a key regulator of adipocyte differentiation. 1 PPARgamma PPARgamma PROPN NNP Number=Sing _ _ _ _ 2 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 many many ADJ JJ Degree=Pos _ _ _ _ 7 genes gene NOUN NNS Number=Plur _ _ _ _ 8 involved involved ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 lipid lipid ADJ JJ Degree=Pos _ _ _ _ 11 anabolism anabolism NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 including include VERB VBG VerbForm=Ger _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 adipocyte adipocyte NOUN NN Number=Sing _ _ _ _ 16 fatty fatty NOUN NN Number=Sing _ _ _ _ 17 acid acid NOUN NN Number=Sing _ _ _ _ 18 binding binde VERB VBG VerbForm=Ger _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 aP2 ap2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 key key ADJ JJ Degree=Pos _ _ _ _ 28 regulator regulator NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 adipocyte adipocyte ADJ JJ Degree=Pos _ _ _ _ 31 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 6962 # text = PPARgamma is also expressed in hematopoietic cells and is up-regulated in activated monocytes/macrophages. 1 PPARgamma PPARgamma PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 up up ADV RB _ _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 / / PUNCT , _ _ _ _ SpaceAfter=No 17 macrophages. macrophages. NOUN NN Number=Sing _ _ _ _ # sent_id = 6963 # text = Activation of PPARgamma may play a role in the induction of differentiation of macrophages to foam cells that are associated with atherosclerotic lesions. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 PPARgamma PPARgamma PROPN NNP Number=Sing _ _ _ _ 4 may may AUX MD VerbForm=Fin _ _ _ _ 5 play play VERB VB VerbForm=Inf _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 foam foam VERB VB VerbForm=Inf _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 atherosclerotic atherosclerotic ADJ JJ Degree=Pos _ _ _ _ 23 lesions lesion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 6964 # text = We report that both natural and synthetic PPARgamma agonists induce time- and dose-dependent increases in aP2 mRNA in both primary human monocytes and the monocytic cell line, THP-1. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 both both DET DT _ _ _ _ _ 5 natural natural ADJ JJ Degree=Pos _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 8 PPARgamma PPARgamma PROPN NNP Number=Sing _ _ _ _ 9 agonists agonist NOUN NNS Number=Plur _ _ _ _ 10 induce induce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 17 increases increase NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 aP2 aP2 NUM CD NumType=Card _ _ _ _ 20 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 both both DET DT _ _ _ _ _ 23 primary primary ADJ JJ Degree=Pos _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 6965 # text = These data suggest that PPARgamma activation may play a role in monocyte differentiation and function analogous to its well-characterized role in adipocytes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 PPARgamma PPARgamma PROPN NNP Number=Sing _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 may may AUX MD VerbForm=Fin _ _ _ _ 8 play play VERB VB VerbForm=Inf _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 role role NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 13 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 function function NOUN NN Number=Sing _ _ _ _ 16 analogous analogous ADJ JJ Degree=Pos _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 well well ADV RB Degree=Pos _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 role role NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 adipocytes adipocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6966 # text = Document 003001927 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001927 003001927 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6967 # text = An enhancer-blocking element between alpha and delta gene segments within the human T cell receptor alpha/delta locus. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 blocking block VERB VBG VerbForm=Ger _ _ _ _ 5 element element NOUN NN Number=Sing _ _ _ _ 6 between between ADP IN _ _ _ _ _ 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 delta delof NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 segments segment NOUN NNS Number=Plur _ _ _ _ 12 within within ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 T T PROPN NNP Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 alpha/ alphaith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 19 delta delta PROPN NNP Number=Sing _ _ _ _ 20 locus locus PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6968 # text = T cell receptor (TCR) alpha and delta gene segments are organized within a single genetic locus but are differentially regulated during T cell development. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 receptor receptor NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 TCR TCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 delta delof NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 segments segment NOUN NNS Number=Plur _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 organized organize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 within within ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 single single ADJ JJ Degree=Pos _ _ _ _ 17 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 18 locus locus NOUN NN Number=Sing _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 differentially differentially ADV RB _ _ _ _ _ 22 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 during during ADP IN _ _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 6969 # text = An enhancer-blocking element (BEAD-1, for blocking element alpha/delta 1) was localized to a 2.0-kb region 3' of TCR delta gene segments and 5' of TCR alpha joining gene segments within this locus. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 blocking blocking NOUN NN Number=Sing _ _ _ _ 5 element element NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 BEAD Bead NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 for for SCONJ IN _ _ _ _ _ 12 blocking block VERB VBG VerbForm=Ger _ _ _ _ 13 element element NOUN NN Number=Sing _ _ _ _ 14 alpha/ alpha/ PUNCT HYPH _ _ _ _ SpaceAfter=No 15 delta delta NOUN NN Number=Sing _ _ _ _ 16 1 1 X LS _ _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 localized localize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 2.0 2.0 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kb kb NOUN NN Number=Sing _ _ _ _ 25 region region NOUN NN Number=Sing _ _ _ _ 26 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ' ' NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 TCR TCR PROPN NNP Number=Sing _ _ _ _ 30 delta delta PART TO Abbr=Yes _ _ _ _ 31 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 segments segment NOUN NNS Number=Plur _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 ' ' NOUN NNS Number=Plur _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 TCR Tcr NOUN NN Number=Sing _ _ _ _ 38 alpha alpha NOUN NN Number=Sing _ _ _ _ 39 joining join VERB VBG VerbForm=Ger _ _ _ _ 40 gene gene ADJ JJ Degree=Pos _ _ _ _ 41 segments segment NOUN NNS Number=Plur _ _ _ _ 42 within within ADP IN _ _ _ _ _ 43 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 44 locus. locus. NOUN NN Number=Sing _ _ _ _ # sent_id = 6970 # text = BEAD-1 blocked the ability of the TCR delta enhancer (Edelta) to activate a promoter when located between the two in a chromatin-integrated construct. 1 BEAD Bead ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 ability ability NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 TCR TCR PROPN NNP Number=Sing _ _ _ _ 10 delta delta PROPN NNP Number=Sing _ _ _ _ 11 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 Edelta Edelta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 activate activate VERB VB VerbForm=Inf _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ _ 19 when when ADV WRB PronType=Int _ _ _ _ 20 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 between between ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 two two NUM CD NumType=Card _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 chromatin- chromatin- SYM SYM _ _ _ _ SpaceAfter=No 27 integrated integrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 construct construct NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 6971 # text = We propose that BEAD-1 functions as a boundary that separates the TCR alpha/delta locus into distinct regulatory domains controlled by Edelta and the TCR alpha enhancer, and that it prevents Edelta from opening the chromatin of the TCR alpha joining gene segments for VDJ recombination at an early stage of T cell development. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 BEAD Bead NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 functions function NOUN NNS Number=Plur _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 boundary boundary NOUN NN Number=Sing _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 separates separate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 TCR Tcr NOUN NN Number=Sing _ _ _ _ 15 alpha/ alpha/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 16 delta delof PROPN NNP Number=Sing _ _ _ _ 17 locus locus ADV RB _ _ _ _ _ 18 into into ADP IN _ _ _ _ _ 19 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 20 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 21 domains domains NOUN NNS Number=Plur _ _ _ _ 22 controlled control VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 Edelta Edelta PROPN NNP Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 TCR Tcr NOUN NN Number=Sing _ _ _ _ 28 alpha alpha NOUN NN Number=Sing _ _ _ _ 29 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 that that SCONJ IN _ _ _ _ _ 33 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 34 prevents prevent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 Edelta Edelta PROPN NNP Number=Sing _ _ _ _ 36 from from SCONJ IN _ _ _ _ _ 37 opening open VERB VBG VerbForm=Ger _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 TCR TCR PROPN NNP Number=Sing _ _ _ _ 43 alpha alpha PROPN NNP Number=Sing _ _ _ _ 44 joining join VERB VBG VerbForm=Ger _ _ _ _ 45 gene gene ADJ JJ Degree=Pos _ _ _ _ 46 segments segment NOUN NNS Number=Plur _ _ _ _ 47 for for ADP IN _ _ _ _ _ 48 VDJ VDJ PROPN NNP Number=Sing _ _ _ _ 49 recombination recombination NOUN NN Number=Sing _ _ _ _ 50 at at ADP IN _ _ _ _ _ 51 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 52 early early ADJ JJ Degree=Pos _ _ _ _ 53 stage stage NOUN NN Number=Sing _ _ _ _ 54 of of ADP IN _ _ _ _ _ 55 T t PROPN NNP Number=Sing _ _ _ _ 56 cell cell NOUN NN Number=Sing _ _ _ _ 57 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6972 # text = Document 003001947 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001947 003001947 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6973 # text = Nuclear factor-kappaB induction in CD45RO+ and CD45RA+ 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 -kappaB -kappab NOUN NN Number=Sing _ _ _ _ 4 induction induction NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 CD45RO CD45RO NUM CD NumType=Card _ _ _ SpaceAfter=No 7 + + SYM SYM _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 CD45RA CD45RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 + + SYM NFP _ _ _ _ _ # sent_id = 6974 # text = T cell subsets during aging. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 subsets subset NOUN NNS Number=Plur _ _ _ _ 4 during during ADP IN _ _ _ _ _ 5 aging aging NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6975 # text = An increase in the ratio of memory to naive T cells has been postulated to underlie immune hyporesponsiveness accompanying aging. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 increase increase NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 ratio ratio NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 memory memory NOUN NN Number=Sing _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 naive naive VERB VB VerbForm=Inf _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 14 postulated postulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 underlie underlie VERB VB VerbForm=Inf _ _ _ _ 17 immune immune PRON PRP _ _ _ _ _ 18 hyporesponsiveness hyporesponsiveness NOUN NN Number=Sing _ _ _ _ 19 accompanying accompany VERB VBG VerbForm=Ger _ _ _ _ 20 aging ag VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 6976 # text = Our analyses of the induction of nuclear factor-kappaB (NFkappaB) in activated memory (CD45RO+) and naive (CD45RA+) 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 analyses analysis NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 induction induction NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 factor-kappaB factor-kappaB NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 activated activated ADJ JJ Degree=Pos _ _ _ _ 14 memory memory NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 CD45RO Cd45ro NUM CD NumType=Card _ _ _ SpaceAfter=No 17 + + SYM SYM _ _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 naive naive NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 CD45RA CD45Ra NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 +) +) SYM NFP _ _ _ _ _ # sent_id = 6977 # text = T cell subsets from young and elderly donors has demonstrated that, regardless of donor age, memory T cells are not significantly altered in their responsiveness to TNF-alpha-mediated induction of NFkappaB. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 subsets subset NOUN NNS Number=Plur _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 young young ADJ JJ Degree=Pos _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 elderly elderly ADJ JJ Degree=Pos _ _ _ _ 8 donors donor NOUN NNS Number=Plur _ _ _ _ 9 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 regardless regardless ADV RB _ _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 donor donor NOUN NN Number=Sing _ _ _ _ 16 age age NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 memory memory NOUN NN Number=Sing _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 significantly significantly ADV RB _ _ _ _ _ 24 altered alter VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 27 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 alpha-mediated alpha-mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 induction induction NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 6978 # text = Although treatment with TNF-alpha induced nuclear localization of NFkappaB in both memory and naive T cell subsets, irrespective of the age of the donor, the levels of induced NFkappaB were significantly lower in both subsets of T cells obtained from the elderly, when compared to those in young. 1 Although although SCONJ IN _ _ _ _ _ 2 treatment treatment NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 alpha alpha X FW Foreign=Yes _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 localization localization NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NFkappaB Nfkappab PROPN NNP Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 both both CCONJ CC _ _ _ _ _ 14 memory memory NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 naive naive ADJ JJ Degree=Pos _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 subsets subset NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 irrespective irrespective ADJ JJ Degree=Pos _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 age age NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 donor donor NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 levels level NOUN NNS Number=Plur _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 NFkappaB Nfkappab PROPN NNP Number=Sing _ _ _ _ 34 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 significantly significantly ADV RB _ _ _ _ _ 36 lower lower ADJ JJR Degree=Cmp _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 both both DET DT _ _ _ _ _ 39 subsets subset NOUN NNS Number=Plur _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 T t PROPN NNP Number=Sing _ _ _ _ 42 cells cell NOUN NNS Number=Plur _ _ _ _ 43 obtained obtaine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 from from ADP IN _ _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 elderly elderly ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 when when ADV WRB PronType=Int _ _ _ _ 49 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 to to ADP IN _ _ _ _ _ 51 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 52 in in ADP IN _ _ _ _ _ 53 young young ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 6979 # text = Examination of IkappaB alpha regulation revealed that TNF-alpha-mediated degradation of IkappaB alpha in both memory and naive T cells from the elderly was severely impaired, thus contributing to the lowered induction of the observed NFkappaB. 1 Examination examination NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ _ 4 alpha alpha PROPN NNP Number=Sing _ _ _ _ 5 regulation regulation NOUN NN Number=Sing _ _ _ _ 6 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alpha-mediated alpha-mediated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 degradation degradation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 IkappaB Ikappab PROPN NNP Number=Sing _ _ _ _ 14 alpha alpha ADV RB _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 both both DET DT _ _ _ _ _ 17 memory memory NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 naive naive ADJ JJ Degree=Pos _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 elderly elderly NOUN NN Number=Sing _ _ _ _ 25 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 26 severely severely ADV RB _ _ _ _ _ 27 impaired impaire ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 thus thus ADV RB _ _ _ _ _ 30 contributing contribute VERB VBG VerbForm=Ger _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 lowered lower VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 induction induction NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 observed observe ADJ JJ Degree=Pos _ _ _ _ 38 NFkappaB Nfkappab PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 6980 # text = In addition, this age-related decrease in induction of nuclear NFkappaB correlated with decrease in intracellular IL-2 receptor expression and anti-CD3-induced proliferation of both memory and naive T cells subsets. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 age age NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 related related ADJ JJ Degree=Pos _ _ _ _ 8 decrease decrease NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 NFkappaB Nfkappab PROPN NNP Number=Sing _ _ _ _ 14 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 decrease decrease NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 19 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ _ 22 receptor receptor NOUN NN Number=Sing _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 -induced -induced ADJ JJ Degree=Pos _ _ _ _ 27 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 both both CCONJ CC _ _ _ _ _ 30 memory memory NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 naive naive ADJ JJ Degree=Pos _ _ _ _ 33 T t PROPN NNP Number=Sing _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ _ 35 subsets subset VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 6981 # text = Taken together, our results suggest that the age-related hyporesponsiveness cannot be attributed to a skewing of the T cell population towards a memory phenotype in the elderly. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 age age NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 related related ADJ JJ Degree=Pos _ _ _ _ 12 hyporesponsiveness hyporesponsiveness NOUN NN Number=Sing _ _ _ _ 13 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 14 not not PART RB _ _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 attributed attribute VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 skewing skewing NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 T T PROPN NNP Number=Sing _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 population population NOUN NN Number=Sing _ _ _ _ 25 towards towards ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 memory memory NOUN NN Number=Sing _ _ _ _ 28 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 elderly elderly NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6982 # text = Document 003001949 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001949 003001949 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6983 # text = Patterns of Pan expression and role of Pan proteins in endocrine cell type-specific complex formation. 1 Patterns pattern NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Pan Pan PROPN NNP Number=Sing _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Pan Pan PROPN NNP Number=Sing _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 endocrine endocrine NOUN NN Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT : _ _ _ _ SpaceAfter=No 15 specific specific ADJ JJ Degree=Pos _ _ _ _ 16 complex complex ADJ JJ Degree=Pos _ _ _ _ 17 formation formation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6984 # text = The Pan gene encodes at least two distinct transcripts, Pan-1 and Pan-2 (also known as E47 and E12, respectively), by the mechanism of alternative RNA splicing. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Pan Pan PROPN NNP Number=Sing _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ _ 4 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 at at ADV RB _ _ _ _ _ 6 least least ADV RBS Degree=Sup _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 9 transcripts transcript NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 Pan Pan PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 Pan Pan PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 also also ADV RB _ _ _ _ _ 20 known known VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 as as ADP IN _ _ _ _ _ 22 E47 E47 NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 E12 E12 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 34 RNA RNA PROPN NNP Number=Sing _ _ _ _ 35 splicing splicing NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 6985 # text = Northern blot analyses performed on rat and mouse tissues have detected ubiquitously expressed Pan transcripts, but the abundance, distribution, and form of Pan proteins have not been clearly defined. 1 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 analyses analysis NOUN NNS Number=Plur _ _ _ _ 4 performed perform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 rat rat NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 mouse mouse NOUN NN Number=Sing _ _ _ _ 9 tissues tissue NOUN NNS Number=Plur _ _ _ _ 10 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 detected detect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 ubiquitously ubiquitously ADV RB _ _ _ _ _ 13 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 Pan Pan PROPN NNP Number=Sing _ _ _ _ 15 transcripts transcript NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 abundance abundance NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 distribution distribution NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 form form NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 Pan Pan PROPN NNP Number=Sing _ _ _ _ 27 proteins protein NOUN NNS Number=Plur _ _ _ _ 28 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 not not PART RB _ _ _ _ _ 30 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 31 clearly clearly ADV RB _ _ _ _ _ 32 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 6986 # text = Studies of cell lines representing endocrine, fibroblast, and lymphoid lineages using polyclonal antisera to detect E2A proteins have suggested that significant E2A protein expression is restricted to B-lymphocytes. 1 Studies study NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 lines line NOUN NNS Number=Plur _ _ _ _ 5 representing represent VERB VBG VerbForm=Ger _ _ _ _ 6 endocrine endocrine NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 fibroblast fibroblast NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 12 lineages lineage NOUN NNS Number=Plur _ _ _ _ 13 using use VERB VBG VerbForm=Ger _ _ _ _ 14 polyclonal polyclonal ADJ JJ Degree=Pos _ _ _ _ 15 antisera antisera NOUN NN Number=Sing _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 detect detect VERB VB VerbForm=Inf _ _ _ _ 18 E2A E2a NOUN NN Number=Sing _ _ _ _ 19 proteins protein NOUN NNS Number=Plur _ _ _ _ 20 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 suggested suggest VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 23 significant significant ADJ JJ Degree=Pos _ _ _ _ 24 E2A E2a NOUN NN Number=Sing _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 restricted restrict VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 6987 # text = We have developed a monoclonal antibody, Yae, which is specific for Pan/E2A proteins, and have used the Yae antibody to examine a variety of endocrine and nonendocrine cell lineages for differences in Pan/E2A protein expression, subcellular localization, and heteromeric complex formation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 developed develop VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 6 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 Yae Yae PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 which which PRON WDT PronType=Rel _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 Pan/ Pan/ SYM SYM _ _ _ _ SpaceAfter=No 15 E2 E2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 A a NOUN NN Number=Sing _ _ _ _ 17 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 Yae Yae PROPN NNP Number=Sing _ _ _ _ 24 antibody antibody NOUN NN Number=Sing _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 examine examine VERB VB VerbForm=Inf _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 variety variety NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 endocrine endocrine NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 nonendocrine nonendocrine NOUN NN Number=Sing _ _ _ _ 33 cell cell NOUN NN Number=Sing _ _ _ _ 34 lineages lineage NOUN NNS Number=Plur _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 differences difference NOUN NNS Number=Plur _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 Pan/ Pan/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 E2 E2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 41 protein protein NOUN NN Number=Sing _ _ _ _ 42 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 subcellular subcelular ADJ JJ Degree=Pos _ _ _ _ 45 localization localization NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 heteromeric heteromeric ADJ JJ Degree=Pos _ _ _ _ 49 complex complex ADJ JJ Degree=Pos _ _ _ _ 50 formation formation NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 6988 # text = In contrast to previous results obtained using polyclonal antiseras to detect Pan/E2A proteins, we report comparable levels of Pan proteins in GH/PRL- and insulin-producing, B- and T-lymphocyte cells. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 previous previous ADJ JJ Degree=Pos _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 obtained obtain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 using use VERB VBG VerbForm=Ger _ _ _ _ 8 polyclonal polyclonal ADJ JJ Degree=Pos _ _ _ _ 9 antiseras antisera NOUN NNS Number=Plur _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 detect detect VERB VB VerbForm=Inf _ _ _ _ 12 Pan/ Pan/ SYM SYM _ _ _ _ SpaceAfter=No 13 E2 E2 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 A a NOUN NN Number=Sing _ _ _ _ 15 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 18 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 comparable comparable ADJ JJ Degree=Pos _ _ _ _ 20 levels level NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 Pan Pan PROPN NNP Number=Sing _ _ _ _ 23 proteins protein NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 GH GH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 / / PUNCT , _ _ _ _ SpaceAfter=No 27 PRL PRL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 insulin- insulin- SYM NFP _ _ _ _ SpaceAfter=No 31 producing produce VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 T- T- SYM NFP _ _ _ _ SpaceAfter=No 37 lymphocyte lymphocyte ADJ JJ Degree=Pos _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 6989 # text = IEF-1, a pancreatic beta-cell type-specific complex believed to regulate insulin expression, is demonstrated to consist of at least two distinct species, one of which does not contain Pan molecules. 1 IEF IEF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 pancreatic pancreatic ADJ JJ Degree=Pos _ _ _ _ 7 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT : _ _ _ _ SpaceAfter=No 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 complex complex NOUN NN Number=Sing _ _ _ _ 14 believed believe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 17 insulin insulin ADP IN _ _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 consist consist VERB VB VerbForm=Inf _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 at at ADV RB _ _ _ _ _ 26 least least ADV RBS Degree=Sup _ _ _ _ 27 two two NUM CD NumType=Card _ _ _ _ 28 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 29 species species NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 one one NUM CD NumType=Card _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 which which PRON WDT PronType=Int _ _ _ _ 34 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 not not PART RB _ _ _ _ _ 36 contain contain VERB VB VerbForm=Inf _ _ _ _ 37 Pan Pan PROPN NNP Number=Sing _ _ _ _ 38 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 6990 # text = Although it has been postulated that pituitary endocrine cells and pancreatic endocrine beta-cells share identical Pan/E2A complexes, native-Western analyses of pituitary and endocrine beta-cells detect Pan proteins in distinct cell type-specific complexes. 1 Although although SCONJ IN _ _ _ _ _ 2 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 3 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 postulated postulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 pituitary pituitary ADJ JJ Degree=Pos _ _ _ _ 8 endocrine endocrine NOUN NN Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 pancreatic pancreatic ADJ JJ Degree=Pos _ _ _ _ 12 endocrine endocrine NOUN NN Number=Sing _ _ _ _ 13 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 share share VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 identical identical ADJ JJ Degree=Pos _ _ _ _ 18 Pan/E2 Pan/E2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 A a NOUN NN Number=Sing _ _ _ _ 20 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 native native ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 Western western ADJ JJ Degree=Pos _ _ _ _ 25 analyses analysis NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 pituitary pituitary NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 endocrine endocrine NOUN NN Number=Sing _ _ _ _ 30 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 detect detect VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 Pan Pan ADJ JJ Degree=Pos _ _ _ _ 35 proteins protein NOUN NNS Number=Plur _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 specific specific ADJ JJ Degree=Pos _ _ _ _ 42 complexes complexe NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 6991 # text = Document 003001953 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001953 003001953 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 6992 # text = Coupling of a signal response domain in I kappa B alpha to multiple pathways for NF-kappa B activation. 1 Coupling Coupling NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 signal signal ADJ JJ Degree=Pos _ _ _ _ 5 response response NOUN NN Number=Sing _ _ _ _ 6 domain domain NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 kappa kappa X FW Foreign=Yes _ _ _ _ 10 B B ADJ JJ Degree=Pos _ _ _ _ 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 14 pathways pathway NOUN NNS Number=Plur _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 6993 # text = The eukaryotic transcription factor NF-kappa B plays a central role in the induced expression of human immunodeficiency virus type 1 and in many aspects of the genetic program mediating normal T-cell activation and growth. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 eukaryotic eukaryotic ADJ JJ Degree=Pos _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 central central ADJ JJ Degree=Pos _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 20 virus virus NOUN NN Number=Sing _ _ _ _ 21 type type NOUN NN Number=Sing _ _ _ _ 22 1 1 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 many many ADJ JJ Degree=Pos _ _ _ _ 26 aspects aspect NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 30 program program NOUN NN Number=Sing _ _ _ _ 31 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 32 normal normal ADJ JJ Degree=Pos _ _ _ _ 33 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 activation activation NOUN NN Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 6994 # text = The nuclear activity of NF-kappa B is tightly regulated from the cytoplasmic compartment by an inhibitory subunit called I kappa B alpha. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 activity activity NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 tightly tightly ADV RB _ _ _ _ _ 11 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 15 compartment compartment NOUN NN Number=Sing _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 19 subunit subunit NOUN NN Number=Sing _ _ _ _ 20 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 22 kappa kappa X FW Foreign=Yes _ _ _ _ 23 B b ADJ JJ Degree=Pos _ _ _ _ 24 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 6995 # text = This cytoplasmic inhibitor is rapidly phosphorylated and degraded in response to a diverse set of NF-kappa B-inducing agents, including T-cell mitogens, proinflammatory cytokines, and viral transactivators such as the Tax protein of human T-cell leukemia virus type 1. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 3 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 rapidly rapidly ADV RB _ _ _ _ _ 6 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 degraded degrad VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 response response NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 diverse diverse ADJ JJ Degree=Pos _ _ _ _ 14 set set NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 22 agents agent NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 including include VERB VBG VerbForm=Ger _ _ _ _ 25 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 mitogens mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 30 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 viral viral ADJ JJ Degree=Pos _ _ _ _ 34 transactivators transactivator NOUN NNS Number=Plur _ _ _ _ 35 such such ADJ JJ Degree=Pos _ _ _ _ 36 as as ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 Tax tax NOUN NN Number=Sing _ _ _ _ 39 protein protein NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 human human ADJ JJ Degree=Pos _ _ _ _ 42 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 cell cell NOUN NN Number=Sing _ _ _ _ 44 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 45 virus virus NOUN NN Number=Sing _ _ _ _ 46 type type NOUN NN Number=Sing _ _ _ _ 47 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 6996 # text = To explore these I kappa B alpha-dependent mechanisms for NF-kappa B induction, we identified novel mutants of I kappa B alpha that uncouple its inhibitory and signal-transducing functions in human T lymphocytes. 1 To to PART TO _ _ _ _ _ 2 explore explore VERB VB VerbForm=Inf _ _ _ _ 3 these these PRON DT Number=Plur|PronType=Dem _ _ _ _ 4 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B benefit PROPN NNP Number=Sing _ _ _ _ 7 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 10 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 19 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 novel novel ADJ JJ Degree=Pos _ _ _ _ 21 mutants mutant NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ 25 B B PROPN NNP Number=Sing _ _ _ _ 26 alpha alpha ADP IN _ _ _ _ _ 27 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 28 uncouple uncouple NOUN NN Number=Sing _ _ _ _ 29 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 30 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 transducing transducing VERB VBG VerbForm=Ger _ _ _ _ 35 functions function NOUN NNS Number=Plur _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 human human ADJ JJ Degree=Pos _ _ _ _ 38 T t PROPN NNP Number=Sing _ _ _ _ 39 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 6997 # text = Specifically, removal of the N-terminal 36 amino acids of I kappa B alpha failed to disrupt its ability to form latent complexes with NF-kappa B in the cytoplasm. 1 Specifically specifically ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 removal removal NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 terminal terminal NOUN NN Number=Sing _ _ _ _ 8 36 36 NUM CD NumType=Card _ _ _ _ 9 amino amino DET DT _ _ _ _ _ 10 acids acid NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ 14 B B PROPN NNP Number=Sing _ _ _ _ 15 alpha alpha PROPN NNP Number=Sing _ _ _ _ 16 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 disrupt disrupt VERB VB VerbForm=Inf _ _ _ _ 19 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 ability ability NOUN NN Number=Sing _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 form form VERB VB VerbForm=Inf _ _ _ _ 23 latent latent ADJ JJ Degree=Pos _ _ _ _ 24 complexes complexe NOUN NNS Number=Plur _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 6998 # text = However, this deletion mutation prevented the induced phosphorylation, degradative loss, and functional release of I kappa B alpha from NF-kappa B in Tax-expressing cells. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 deletion deletion NOUN NN Number=Sing _ _ _ _ 5 mutation mutation NOUN NN Number=Sing _ _ _ _ 6 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 degradative degradative ADJ JJ Degree=Pos _ _ _ _ 12 loss loss NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 functional functional ADJ JJ Degree=Pos _ _ _ _ 16 release release NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 19 kappa kappa PROPN NNP Number=Sing _ _ _ _ 20 B b PROPN NNP Number=Sing _ _ _ _ 21 alpha alpha PROPN NNP Number=Sing _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa PROPN NNP Number=Sing _ _ _ _ 26 B b PROPN NNP Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 Tax Tax PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 6999 # text = Alanine substitutions introduced at two serine residues positioned within this N-terminal regulatory region of I kappa B alpha also yielded constitutive repressors that escaped from Tax-induced turnover and that potently inhibited immune activation pathways for NF-kappa B induction, including those initiated from antigen and cytokine receptors. 1 Alanine Alanine NUM CD NumType=Card _ _ _ _ 2 substitutions substitution NOUN NNS Number=Plur _ _ _ _ 3 introduced introduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 at at ADP IN _ _ _ _ _ 5 two two NUM CD NumType=Card _ _ _ _ 6 serine serine NOUN NN Number=Sing _ _ _ _ 7 residues residue NOUN NNS Number=Plur _ _ _ _ 8 positioned position VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 within within ADP IN _ _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 13 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 14 region region NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B B PROPN NNP Number=Sing _ _ _ _ 19 alpha alpha PROPN NNP Number=Sing _ _ _ _ 20 also also ADV RB _ _ _ _ _ 21 yielded yield VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 23 repressors repressor NOUN NNS Number=Plur _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 escaped escape VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 from from ADP IN _ _ _ _ _ 27 Tax tax PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 turnover turnover NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 that that SCONJ IN _ _ _ _ _ 33 potently potently ADV RB _ _ _ _ _ 34 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 immune immune ADJ JJ Degree=Pos _ _ _ _ 36 activation activation NOUN NN Number=Sing _ _ _ _ 37 pathways pathway NOUN NNS Number=Plur _ _ _ _ 38 for for ADP IN _ _ _ _ _ 39 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 kappa kappa PROPN NNP Number=Sing _ _ _ _ 42 B b PROPN NNP Number=Sing _ _ _ _ 43 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 including include VERB VBG VerbForm=Ger _ _ _ _ 46 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 47 initiated initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 48 from from ADP IN _ _ _ _ _ 49 antigen antigen NOUN NN Number=Sing _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 52 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 7000 # text = In contrast, introduction of a phosphoserine mimetic at these sites rectified this functional defect, a finding consistent with a causal linkage between the phosphorylation status and proteolytic stability of this cytoplasmic inhibitor. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 introduction introduction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 phosphoserine phosphoserine NOUN NN Number=Sing _ _ _ _ 8 mimetic mimetic ADJ JJ Degree=Pos _ _ _ _ 9 at at ADP IN _ _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 sites site NOUN NNS Number=Plur _ _ _ _ 12 rectified rectify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 14 functional functional ADJ JJ Degree=Pos _ _ _ _ 15 defect defect NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 finding finding NOUN NN Number=Sing _ _ _ _ 19 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 causal causal ADJ JJ Degree=Pos _ _ _ _ 23 linkage linkage NOUN NN Number=Sing _ _ _ _ 24 between between ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 27 status status NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 proteolytic proteolytic ADJ JJ Degree=Pos _ _ _ _ 30 stability stability NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 33 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 34 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 7001 # text = Together, these in vivo studies define a critical signal response domain in I kappa B alpha that coordinately controls the biologic activities of I kappa B alpha and NF-kappa B in response to viral and immune stimuli. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these PRON DT Number=Plur|PronType=Dem _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 vivo vivo ADJ JJ Degree=Pos _ _ _ _ 6 studies study NOUN NNS Number=Plur _ _ _ _ 7 define define VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 critical critical ADJ JJ Degree=Pos _ _ _ _ 10 signal signal NOUN NN Number=Sing _ _ _ _ 11 response response NOUN NN Number=Sing _ _ _ _ 12 domain domain NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 I I PROPN NNP Number=Sing _ _ _ _ 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B b PROPN NNP Number=Sing _ _ _ _ 17 alpha alpha ADP IN _ _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 coordinately coordinately ADV RB _ _ _ _ _ 20 controls control VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 biologic biologic ADJ JJ Degree=Pos _ _ _ _ 23 activities activity NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 26 kappa kappa PROPN NNP Number=Sing _ _ _ _ 27 B b PROPN NNP Number=Sing _ _ _ _ 28 alpha alpha PROPN NNP Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappa kappa NOUN NN Number=Sing _ _ _ _ 33 B b NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 response response NOUN NN Number=Sing _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 viral viral ADJ JJ Degree=Pos _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 immune immune ADJ JJ Degree=Pos _ _ _ _ 40 stimuli stimuli NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7002 # text = Document 003001956 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001956 003001956 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7003 # text = Molecular cloning and functional characterization of murine cDNA encoding transcription factor NFATc. 1 Molecular Molecular ADJ JJ Degree=Pos _ _ _ _ 2 cloning cloning NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 functional functional ADJ JJ Degree=Pos _ _ _ _ 5 characterization characterization NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 murine murine NOUN NN Number=Sing _ _ _ _ 8 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 9 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 NFATc NFATc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7004 # text = Transcription factors of the NFAT (nuclear factor of activated T cells) family play important roles in immune and inflammatory responses by regulating the expression of genes encoding cytokines and immunoregulatory proteins. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 NFAT Nfat PROPN NNP Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 family family NOUN NN Number=Sing _ _ _ _ 15 play play VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 important important ADJ JJ Degree=Pos _ _ _ _ 17 roles role NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 immune immune ADJ JJ Degree=Pos _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 22 responses response NOUN NNS Number=Plur _ _ _ _ 23 by by SCONJ IN _ _ _ _ _ 24 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 genes gene NOUN NNS Number=Plur _ _ _ _ 29 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 30 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 immunoregulatory immunoregulatory ADJ JJ Degree=Pos _ _ _ _ 33 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 7005 # text = Here we describe cloning and characterization of full-length cDNA encoding murine (m) NFATc which predicts that the protein has all the conserved structural motifs of NFAT family members, including the rel homology domain, the NFAT homology domain and the nuclear translocation signals. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 describe describe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 cloning cloning NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 characterization characterization NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 full full ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 length length NOUN NN Number=Sing _ _ _ _ 11 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 12 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 13 murine murine NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 m m PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 NFATc NFATc PROPN NNP Number=Sing _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 predicts predict VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 all all DET PDT _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 conserved conserved ADJ JJ Degree=Pos _ _ _ _ 27 structural structural ADJ JJ Degree=Pos _ _ _ _ 28 motifs motif NOUN NNS Number=Plur _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 31 family family NOUN NN Number=Sing _ _ _ _ 32 members member NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 including include VERB VBG VerbForm=Ger _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 rel rel NOUN NN Number=Sing _ _ _ _ 37 homology homology NOUN NN Number=Sing _ _ _ _ 38 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 NFAT Nfat PROPN NNP Number=Sing _ _ _ _ 42 homology homology NOUN NN Number=Sing _ _ _ _ 43 domain domain NOUN NN Number=Sing _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 47 translocation translocation NOUN NN Number=Sing _ _ _ _ 48 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 7006 # text = mNFATc complexed with AP-1 bound specifically to the murine IL-2 NFAT recognition sequence and activated transcription from the co-transfected IL-2 promoter in COS-7 cells. 1 mNFATc mnfatc NOUN NN Number=Sing _ _ _ _ 2 complexed complex VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 bound bound NOUN NN Number=Sing _ _ _ _ 8 specifically specifically ADV RB _ _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 murine murine PROPN NNP Number=Sing _ _ _ _ 12 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 NFAT Nfat NOUN NN Number=Sing _ _ _ _ 16 recognition recognition NOUN NN Number=Sing _ _ _ _ 17 sequence sequence NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 co-transfected co-transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 COS COS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 7 7 NUM CD NumType=Card _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 7007 # text = Northern blot analysis showed that the cDNA probe hybridized with a 4.5 kb transcript which is highly inducible in murine T cells. 1 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 cDNA cDNA PROPN NNP Number=Sing _ _ _ _ 8 probe probe NOUN NN Number=Sing _ _ _ _ 9 hybridized hybridize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 4.5 4.5 NUM CD NumType=Card _ _ _ _ 13 kb kb NOUN NN Number=Sing _ _ _ _ 14 transcript transcript NOUN NN Number=Sing _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 highly highly ADV RB _ _ _ _ _ 18 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 murine murine ADJ JJ Degree=Pos _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 7008 # text = By Northern and in situ hybridization, mNFATc transcript was detected from the early stage of development. 1 By by ADP IN _ _ _ _ _ 2 Northern Northern PROPN NNP Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 situ situ NOUN NN Number=Sing _ _ _ _ 6 hybridization hybridization NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 mNFATc mNFATc PROPN NNP Number=Sing _ _ _ _ 9 transcript transcript NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 early early ADJ JJ Degree=Pos _ _ _ _ 15 stage stage NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 7009 # text = In the mouse embryo, mNFATc transcript was strongly expressed in thymus, lung and submandibular gland and weakly in skeletal muscle and heart suggesting that mNFATc may have a role both in embryogenesis and in mature T cells. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 mouse mouse NOUN NN Number=Sing _ _ _ _ 4 embryo embryo NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 mNFATc mNFATc PROPN NNP Number=Sing _ _ _ _ 7 transcript transcript NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 strongly strongly ADV RB _ _ _ _ _ 10 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 thymus thymus NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 lung lung NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 submandibular submandibular ADJ JJ Degree=Pos _ _ _ _ 17 gland gland NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 weakly weakly ADV RB _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 skeletal skeletal ADJ JJ Degree=Pos _ _ _ _ 22 muscle muscle NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 heart heart NOUN NN Number=Sing _ _ _ _ 25 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 mNFATc mNFATc PROPN NNP Number=Sing _ _ _ _ 28 may may AUX MD VerbForm=Fin _ _ _ _ 29 have have VERB VB VerbForm=Inf _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 role role NOUN NN Number=Sing _ _ _ _ 32 both both CCONJ CC _ _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 embryogenesis embryogenesis NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 mature mature ADJ JJ Degree=Pos _ _ _ _ 38 T t PROPN NNP Number=Sing _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7010 # text = Document 003001957 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001957 003001957 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7011 # text = Two distinct signal transmission pathways in T lymphocytes are inhibited by complexes formed between an immunophilin and either FK506 or rapamycin. 1 Two two NUM CD NumType=Card _ _ _ _ 2 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 3 signal signal NOUN NN Number=Sing _ _ _ _ 4 transmission transmission NOUN NN Number=Sing _ _ _ _ 5 pathways pathway NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 complexes complexe NOUN NNS Number=Plur _ _ _ _ 13 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 between between ADP IN _ _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 immunophilin immunophilin ADJ JJ Degree=Pos _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 either either CCONJ CC _ _ _ _ _ 19 FK506 Fk506 NOUN NN Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 rapamycin rapamycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7012 # text = Proliferation and immunologic function of T lymphocytes are initiated by signals from the antigen receptor that are inhibited by the immunosuppressant FK506 but not by its structural analog, rapamycin. 1 Proliferation proliferation NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 immunologic immunologic ADJ JJ Degree=Pos _ _ _ _ 4 function function NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 initiated initiate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 signals signal NOUN NNS Number=Plur _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 15 receptor receptor NOUN NN Number=Sing _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 immunosuppressant immunosuppressant ADJ JJ Degree=Pos _ _ _ _ 22 FK506 Fk506 NOUN NN Number=Sing _ _ _ _ 23 but but CCONJ CC _ _ _ _ _ 24 not not ADV RB _ _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 27 structural structural ADJ JJ Degree=Pos _ _ _ _ 28 analog analog NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 rapamycin rapamycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 7013 # text = On the other hand, interleukin 2 (IL-2)-induced signals are blocked by rapamycin but not by FK506. 1 On on ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 hand hand NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 7 2 2 NUM CD NumType=Card _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 signals signal NOUN NNS Number=Plur _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 rapamycin rapamycin NOUN NN Number=Sing _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 not not ADV RB _ _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 FK506 FK506 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 7014 # text = Remarkably, these two drugs inhibit each other's actions, raising the possibility that both act by means of a common immunophilin (immunosuppressant binding protein). 1 Remarkably remarkably ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 drugs drug NOUN NNS Number=Plur _ _ _ _ 6 inhibit inhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 each each DET DT _ _ _ _ _ 8 other other ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 's 's PART POS _ _ _ _ _ 10 actions action NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 raising rais VERB VBG VerbForm=Ger _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 possibility possibility NOUN NN Number=Sing _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 both both DET DT _ _ _ _ _ 17 act act NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 means means NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 common common ADJ JJ Degree=Pos _ _ _ _ 23 immunophilin immunophilin NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 immunosuppressant immunosuppressant ADJ JJ Degree=Pos _ _ _ _ 26 binding binding VERB VBG VerbForm=Ger _ _ _ _ 27 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 7015 # text = We find that the dissociation constant of rapamycin to the FK506 binding protein FKBP (Kd = 0.2 nM) is close to the dissociation constant of FK506 to FKBP (Kd = 0.4 nM) and to their effective biologic inhibitory concentrations. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 find find VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 dissociation dissociation NOUN NN Number=Sing _ _ _ _ 6 constant constant NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 rapamycin rapamycin NOUN NN Number=Sing _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 FK506 Fk506 NOUN NN Number=Sing _ _ _ _ 12 binding bind VERB VBG VerbForm=Ger _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 FKBP FKBP PROPN NNP Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 Kd K PROPN NNP Number=Sing _ _ _ _ 17 = = SYM SYM _ _ _ _ _ 18 0.2 0.2 NUM CD NumType=Card _ _ _ _ 19 nM nm NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 close close ADJ JJ Degree=Pos _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 dissociation dissociation NOUN NN Number=Sing _ _ _ _ 26 constant constant NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 FK506 FK506 PROPN NNP Number=Sing _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 FKBP FKBP PROPN NNP Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 Kd K PROPN NNP Number=Sing _ _ _ _ 33 = = SYM SYM _ _ _ _ _ 34 0.4 0.4 NUM CD NumType=Card _ _ _ _ 35 nM nm NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 to to ADP IN _ _ _ _ _ 39 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 40 effective effective ADJ JJ Degree=Pos _ _ _ _ 41 biologic biologic NOUN NN Number=Sing _ _ _ _ 42 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 43 concentrations concentration NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 7016 # text = However, an excess of rapamycin is needed to revert FK506-mediated inhibition of IL-2 production, apoptosis, and transcriptional activation of NF-AT, a T-cell-specific transcription factor necessary for IL-2 gene activation. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 excess excess NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 rapamycin rapamycin NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 needed need VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 revert revert VERB VB VerbForm=Inf _ _ _ _ 11 FK506 FK506 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 specific specific ADJ JJ Degree=Pos _ _ _ _ 36 transcription transcription NOUN NN Number=Sing _ _ _ _ 37 factor factor NOUN NN Number=Sing _ _ _ _ 38 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 39 for for ADP IN _ _ _ _ _ 40 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 2 2 NUM CD NumType=Card _ _ _ _ 43 gene gene NOUN NN Number=Sing _ _ _ _ 44 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 7017 # text = Similarly, an excess of FK506 is needed to revert rapamycin-mediated inhibition of IL-2-induced proliferation. 1 Similarly similarly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 excess excess NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 FK506 FK506 PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 needed need VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 revert revert VERB VB VerbForm=Inf _ _ _ _ 11 rapamycin- rapamycin- PUNCT : _ _ _ _ SpaceAfter=No 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 7018 # text = The drug concentrations required for antagonism may be explained by the relative affinity of the drugs to, and by the abundance of, the immunophilin FKBP. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 drug drug NOUN NN Number=Sing _ _ _ _ 3 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 4 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 antagonism antagonism NOUN NN Number=Sing _ _ _ _ 7 may may AUX MD VerbForm=Fin _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 explained explain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 relative relative ADJ JJ Degree=Pos _ _ _ _ 13 affinity affinity NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 drugs drug NOUN NNS Number=Plur _ _ _ _ 17 to to ADP IN _ _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 abundance abundance NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 immunophilin immunophilin ADJ JJ Degree=Pos _ _ _ _ 27 FKBP Fkbp NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 7019 # text = FKBP has been shown to catalyze the interconversion of the cis- and trans-rotamers of the peptidyl-prolyl amide bond of peptide substrates; here we show that rapamycin, like FK506, is a potent inhibitor of the rotamase activity of FKBP 1 FKBP FKBP SYM NFP _ _ _ _ _ 2 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 catalyze catalyze VERB VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 interconversion interconversion NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 rotamers rotamer NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 peptidyl peptidyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 prolyl prolyl NOUN NN Number=Sing _ _ _ _ 22 amide amide NOUN NN Number=Sing _ _ _ _ 23 bond bond NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 peptide peptide NOUN NN Number=Sing _ _ _ _ 26 substrates substrate NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 ; ; PUNCT , _ _ _ _ _ 28 here here ADV RB PronType=Dem _ _ _ _ 29 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 30 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 32 rapamycin rapamycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 like like ADP IN _ _ _ _ _ 35 FK506 FK506 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 potent potent NOUN NN Number=Sing _ _ _ _ 40 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 rotamase rotamase NOUN NN Number=Sing _ _ _ _ 44 activity activity NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 FKBP FKBP PROPN NNP Number=Sing _ _ _ _ # sent_id = 7020 # text = (Ki = 0.2 nM). 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 Ki Ki PROPN NNP Number=Sing _ _ _ _ 3 = = SYM SYM _ _ _ _ _ 4 0.2 0.2 NUM CD NumType=Card _ _ _ _ 5 nM nm NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ _ # sent_id = 7021 # text = Neither FKBP binding nor inhibition of rotamase activity of FKBP alone is sufficient to explain the biologic actions of these drugs. 1 Neither neither DET DT _ _ _ _ _ 2 FKBP Fkbp NOUN NN Number=Sing _ _ _ _ 3 binding binding VERB VBG VerbForm=Ger _ _ _ _ 4 nor nor ADJ JJ Degree=Pos _ _ _ _ 5 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 rotamase rotamase NOUN NN Number=Sing _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 FKBP FKBP PROPN NNP Number=Sing _ _ _ _ 11 alone alone ADV RB _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 explain explain VERB VB VerbForm=Inf _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 biologic biologic ADJ JJ Degree=Pos _ _ _ _ 18 actions action NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 21 drugs drug NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 7022 # text = Rather, these findings suggest that immunophilin bound to FK506 interferes with antigen receptor-induced signals, while rapamycin bound to the immunophilin interferes with IL-2-induced signals. 1 Rather Rather PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 findings finding NOUN NNS Number=Plur _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 immunophilin immunophilin ADJ JJ Degree=Pos _ _ _ _ 8 bound bound ADJ JJ Degree=Pos _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 FK506 FK506 NUM CD NumType=Card _ _ _ _ 11 interferes interfere NOUN NNS Number=Plur _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 while while SCONJ IN _ _ _ _ _ 20 rapamycin rapamycin NOUN NN Number=Sing _ _ _ _ 21 bound bound ADJ JJ Degree=Pos _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 immunophilin immunophilin NOUN NN Number=Sing _ _ _ _ 25 interferes interfere VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7023 # text = Document 003001966 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001966 003001966 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7024 # text = Signals transduced through the CD4 molecule on T lymphocytes activate NF-kappa B. 1 Signals signal NOUN NNS Number=Plur _ _ _ _ 2 transduced transduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 through through ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 6 molecule molecule NOUN NN Number=Sing _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 10 activate activate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7025 # text = We have demonstrated that native envelope glycoproteins of HIV-1, gp160 can induce activation of the transcription factor, NF-kappa B. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 native native ADJ JJ Degree=Pos _ _ _ _ 6 envelope envelope NOUN NN Number=Sing _ _ _ _ 7 glycoproteins glycoprotein NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 gp160 gp160 NOUN NN Number=Sing _ _ _ _ 14 can can AUX MD VerbForm=Fin _ _ _ _ 15 induce induce VERB VB VerbForm=Inf _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 7026 # text = The stimulatory effects of gp160 are mediated through the CD4 molecule, since pretreatment with soluble CD4 abrogates its activity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 stimulatory stimulatory ADJ JJ Degree=Pos _ _ _ _ 3 effects effect NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 gp160 gp160 NOUN NN Number=Sing _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 through through ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 11 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 since since SCONJ IN _ _ _ _ _ 14 pretreatment pretreatment NOUN NN Number=Sing _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 17 CD4 Cd4 NOUN NN Number=Sing _ _ _ _ 18 abrogates abrogate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 7027 # text = The gp160-induced NF-kappa B complex consists of p65, p50 and c-rel proteins. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 gp160 gp160 NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 -induced -induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B b PROPN NNP Number=Sing _ _ _ _ 8 complex complex ADJ JJ Degree=Pos _ _ _ _ 9 consists consist NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 p50 p50 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 c- c- SYM NFP _ _ _ _ SpaceAfter=No 16 rel rel ADJ JJ Degree=Pos _ _ _ _ 17 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 7028 # text = The stimulatory effect of gp160 on NF-kappa B activation is protein synthesis independent, is dependent upon protein tyrosine phosphorylation, and abrogated by inhibitors of protein kinase C. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 stimulatory stimulatory ADJ JJ Degree=Pos _ _ _ _ 3 effect effect NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 gp160 gp160 NUM CD NumType=Card _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 15 independent independent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 19 upon upon ADP IN _ _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 22 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 abrogated abrogate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ _ 30 kinase kinase NOUN NN Number=Sing _ _ _ _ 31 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 7029 # text = The gp160-mediated activation of NF-kappa B in CD4 positive T cells may be involved in biological effects, e.g., enhanced HIV replication, hypergammaglobulinemia, increased cytokine secretion, hypercellularity in bone marrow and apoptosis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 gp160 gp160 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B b PROPN NNP Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 13 positive positive ADJ JJ Degree=Pos _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 may may AUX MD VerbForm=Fin _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 involved involved ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 biological biological ADJ JJ Degree=Pos _ _ _ _ 21 effects effect NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 e.g. e.g. X FW _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 HIV Hiv PROPN NNP Number=Sing _ _ _ _ 27 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 hypergammaglobulinemia hypergammaglobulinemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 33 secretion secretion NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 hypercellularity hypercellularity NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 bone bone ADJ JJ Degree=Pos _ _ _ _ 38 marrow marrow NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7030 # text = Document 003001967 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001967 003001967 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7031 # text = Constitutive activation of different Jak tyrosine kinases in human T cell leukemia virus type 1 (HTLV-1) tax protein or virus-transformed cells. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 different different ADJ JJ Degree=Pos _ _ _ _ 5 Jak Jak PROPN NNP Number=Sing _ _ _ _ 6 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 7 kinases kinase NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 T T PROPN NNP Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 13 virus virus NOUN NN Number=Sing _ _ _ _ 14 type type NOUN NN Number=Sing _ _ _ _ 15 1 1 NUM CD NumType=Card _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 1 1 X LS _ _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 tax tax NOUN NN Number=Sing _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7032 # text = HTLV-1 infection causes an adult T cell leukemia in humans. 1 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 infection infection NOUN NN Number=Sing _ _ _ _ 5 causes cause VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 adult adult ADJ JJ Degree=Pos _ _ _ _ 8 T t NOUN NN Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 humans human NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 7033 # text = The viral encoded protein tax, is thought to play an important role in oncogenesis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 viral viral ADJ JJ Degree=Pos _ _ _ _ 3 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 play play VERB VB VerbForm=Inf _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 important important ADJ JJ Degree=Pos _ _ _ _ 13 role role NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 oncogenesis oncogenesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 7034 # text = Our previous data obtained from a tax transgenic mouse model revealed that tax transforms mouse fibroblasts but not thymocytes, despite comparable levels of tax expression in both tissues. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 previous previous ADJ JJ Degree=Pos _ _ _ _ 3 data data NOUN NN Number=Sing _ _ _ _ 4 obtained obtain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 tax tax NOUN NN Number=Sing _ _ _ _ 8 transgenic transgenic NOUN NN Number=Sing _ _ _ _ 9 mouse mouse NOUN NN Number=Sing _ _ _ _ 10 model model NOUN NN Number=Sing _ _ _ _ 11 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 tax tax NOUN NN Number=Sing _ _ _ _ 14 transforms transform NOUN NNS Number=Plur _ _ _ _ 15 mouse mouse NOUN NN Number=Sing _ _ _ _ 16 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 not not ADV RB _ _ _ _ _ 19 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 despite despite ADP IN _ _ _ _ _ 22 comparable comparable ADJ JJ Degree=Pos _ _ _ _ 23 levels level NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 tax tax NOUN NN Number=Sing _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 both both DET DT _ _ _ _ _ 29 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 7035 # text = Constitutive tyrosine phosphorylation of a 130-kD protein(s) was observed in the tax transformed fibroblast B line and in HTLV-1 transformed human lymphoid lines, but not in thymocytes from Thy-tax transgenic mice. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 3 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 130 130 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kD kd NOUN NN Number=Sing _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 s s X AFX _ _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 tax tax NOUN NN Number=Sing _ _ _ _ 18 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 fibroblast fibroblast ADJ JJ Degree=Pos _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 line line NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 lymphoid lymphoid NOUN NN Number=Sing _ _ _ _ 30 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 but but CCONJ CC _ _ _ _ _ 33 not not ADV RB _ _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 36 from from ADP IN _ _ _ _ _ 37 Thy thy PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 tax tax NOUN NN Number=Sing _ _ _ _ 40 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 41 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 7036 # text = Phosphotyrosine immunoprecipitation followed by Western blot analysis with a set of Jak kinase specific antibodies, identified p130 as Jak2 in the tax transformed mouse fibroblastic cell line and Jak3 in HTLV-1 transformed human T cell lines. 1 Phosphotyrosine Phosphotyrosine NOUN NN Number=Sing _ _ _ _ 2 immunoprecipitation immunoprecipitation NOUN NN Number=Sing _ _ _ _ 3 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 Western western ADJ JJ Degree=Pos _ _ _ _ 6 blot blot NOUN NN Number=Sing _ _ _ _ 7 analysis analysis NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 set set NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 Jak Jak PROPN NNP Number=Sing _ _ _ _ 13 kinase kinase NOUN NN Number=Sing _ _ _ _ 14 specific specific ADJ JJ Degree=Pos _ _ _ _ 15 antibodies antibody NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 p130 p130 NUM CD NumType=Card _ _ _ _ 19 as as ADP IN _ _ _ _ _ 20 Jak2 Jak2 NUM CD NumType=Card _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 tax tax NOUN NN Number=Sing _ _ _ _ 24 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 mouse mouse NOUN NN Number=Sing _ _ _ _ 26 fibroblastic fibroblastic ADJ JJ Degree=Pos _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 line line NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 Jak3 Jak3 NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ _ 35 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 human human ADJ JJ Degree=Pos _ _ _ _ 37 T t PROPN NNP Number=Sing _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 7037 # text = Phosphorylation of Jak2 in tax transformed cells resulted from high expression of IL-6. 1 Phosphorylation Phosphorylation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Jak2 Jak2 NUM CD NumType=Card _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 tax tax NOUN NN Number=Sing _ _ _ _ 6 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 high high ADJ JJ Degree=Pos _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 7038 # text = Tyrosine phosphorylation of this protein could also be induced in Balb/c3T3 cells using a supernatant from the B line, which was associated with induction of cell proliferation. 1 Tyrosine Tyrosine NOUN NN Number=Sing _ _ _ _ 2 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 could could AUX MD VerbForm=Fin _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 Balb/ Balb/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 c3T3 c3T3 NOUN NN Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 using use VERB VBG VerbForm=Ger _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 supernatant supernatant NOUN NN Number=Sing _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ _ 20 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 induction induction NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 7039 # text = Both phosphorylation and proliferation were inhibited by IL-6 neutralizing antibodies. 1 Both both DET DT _ _ _ _ _ 2 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 6 6 NUM CD NumType=Card _ _ _ _ 11 neutralizing neutralizing VERB VBG VerbForm=Ger _ _ _ _ 12 antibodies antibody NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 7040 # text = Constitutive phosphorylation of Jak kinases may facilitate tumor growth in both HTLV-1 infected human T cells and the transgenic mouse model. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Jak Jak PROPN NNP Number=Sing _ _ _ _ 5 kinases kinase NOUN NNS Number=Plur _ _ _ _ 6 may may AUX MD VerbForm=Fin _ _ _ _ 7 facilitate facilitate VERB VB VerbForm=Inf _ _ _ _ 8 tumor tumor NOUN NN Number=Sing _ _ _ _ 9 growth growth NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 both both DET DT _ _ _ _ _ 12 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 22 mouse mouse NOUN NN Number=Sing _ _ _ _ 23 model model NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7041 # text = Document 003001968 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001968 003001968 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7042 # text = Regulation of interleukin-1 beta production by glucocorticoids in human monocytes: 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 beta beta NOUN NN Number=Sing _ _ _ _ 7 production production NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 : : PUNCT : _ _ _ _ _ # sent_id = 7043 # text = the mechanism of action depends on the activation signal. 1 the the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 action action NOUN NN Number=Sing _ _ _ _ 5 depends depend VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7044 # text = Glucocorticoids are known to downregulate interleukin-1 beta production in monocytic cells by two different mechanims: direct inhibition of the gene transcription and destabilization of the preformed interleukin-1 beta mRNA. 1 Glucocorticoids Glucocorticoid NOUN NNS Number=Plur _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 downregulate downregulate VERB VB VerbForm=Inf _ _ _ _ 6 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 beta beta NOUN NN Number=Sing _ _ _ _ 10 production production NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 two two NUM CD NumType=Card _ _ _ _ 16 different different ADJ JJ Degree=Pos _ _ _ _ 17 mechanims mechanim NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 : : PUNCT : _ _ _ _ _ 19 direct direct ADJ JJ Degree=Pos _ _ _ _ 20 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 gene gene ADJ JJ Degree=Pos _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 destabilization destabilization NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 preformed preform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ _ 33 beta beta NOUN NN Number=Sing _ _ _ _ 34 mRNA mRNa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 7045 # text = Now we have examined the effect of the nature of the monocyte activating signal on these two inhibitory mechanims. 1 Now now ADV RB _ _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 effect effect NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 nature nature NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 13 activating activat VERB VBG VerbForm=Ger _ _ _ _ 14 signal signal NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 17 two two NUM CD NumType=Card _ _ _ _ 18 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 19 mechanims mechanim NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 7046 # text = When human monocytes were preincubated with dexamethasone for 1 hour and then stimulated either with bacterial lipopolysaccharide or phorbol myristate, it was found that dexamethasone inhibited the lipopolysaccharide-induced interleukin-1 beta protein production, but the phorbol myristate-induced production was increased 3-10 fold. 1 When when ADV WRB PronType=Int _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 preincubated preincubate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 1 1 NUM CD NumType=Card _ _ _ _ 10 hour hour NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 then then ADV RB PronType=Dem _ _ _ _ 13 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 either either CCONJ CC _ _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 17 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 20 myristate myristate NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 dexamethasone dexamethasone PRON NN Number=Sing _ _ _ _ 27 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ _ 35 beta beta NOUN NN Number=Sing _ _ _ _ 36 protein protein NOUN NN Number=Sing _ _ _ _ 37 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 but but CCONJ CC _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 42 myristate myristate NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 production production NOUN NN Number=Sing _ _ _ _ 46 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 47 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 48 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 49 - - SYM SYM _ _ _ _ SpaceAfter=No 50 10 10 NUM CD NumType=Card _ _ _ _ 51 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 7047 # text = This difference was also seen at the mRNA level. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 difference difference NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 at at ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 9 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 7048 # text = When dexamethasone was added to the cultures 3 hours after the stimulators, it clearly decreased the interleukin-1 beta mRNA levels regardless of the stimulator used (although the effect was clearly weaker on the PMA-induced mRNA). 1 When when ADV WRB PronType=Int _ _ _ _ 2 dexamethasone dexamethasone PRON NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 added add VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 cultures culture NOUN NNS Number=Plur _ _ _ _ 8 3 3 NUM CD NumType=Card _ _ _ _ 9 hours hour NOUN NNS Number=Plur _ _ _ _ 10 after after ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 stimulators stimulator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 15 clearly clearly ADV RB _ _ _ _ _ 16 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 beta beta NOUN NN Number=Sing _ _ _ _ 22 mRNA mRNa SYM SYM _ _ _ _ _ 23 levels level NOUN NNS Number=Plur _ _ _ _ 24 regardless regardless ADV RB _ _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 stimulator stimulator NOUN NN Number=Sing _ _ _ _ 28 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 although although SCONJ IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 effect effect NOUN NN Number=Sing _ _ _ _ 33 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 34 clearly clearly ADV RB _ _ _ _ _ 35 weaker weaker ADJ JJR Degree=Cmp _ _ _ _ 36 on on ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 7049 # text = Thus these data suggest that the phorbol myristate-induced signal (prolonged protein kinase C activation?) cannot be inhibited by prior incubation with dexamethasone and it also protects the induced mRNA for the degradative action of dexamethasone. 1 Thus thus ADV RB _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 data data NOUN NN Number=Sing _ _ _ _ 4 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 8 myristate myristate NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 signal signal NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 prolonged prolonge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 kinase kinase NOUN NN Number=Sing _ _ _ _ 16 C c NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ? ? PUNCT . _ _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 21 not not PART RB _ _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 prior prior ADJ JJ Degree=Pos _ _ _ _ 26 incubation incubation NOUN NN Number=Sing _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 31 also also ADV RB _ _ _ _ _ 32 protects protect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 36 for for ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 degradative degradative ADJ JJ Degree=Pos _ _ _ _ 39 action action NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7050 # text = Document 003001970 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001970 003001970 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7051 # text = Heat shock induces HIV-1 replication in chronically infected promyelocyte cell line OM10.1. 1 Heat heat ADJ JJ Degree=Pos _ _ _ _ 2 shock shock NOUN NN Number=Sing _ _ _ _ 3 induces induce NOUN NNS Number=Plur _ _ _ _ 4 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 replication replication NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 chronically chronically ADV RB _ _ _ _ _ 10 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 promyelocyte promyelocyte NOUN NN Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 line line NOUN NN Number=Sing _ _ _ _ 14 OM Om NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 10.1 10.1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7052 # text = A long period of clinical latency before development of symptoms is characteristic of human immunodeficiency virus type 1 (HIV-1) infection. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 long long ADJ JJ Degree=Pos _ _ _ _ 3 period period NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 6 latency latency NOUN NN Number=Sing _ _ _ _ 7 before before ADP IN _ _ _ _ _ 8 development development NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 symptoms symptom NOUN NNS Number=Plur _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 characteristic characteristic ADJ JJ Degree=Pos _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ _ 17 type type NOUN NN Number=Sing _ _ _ _ 18 1 1 NUM CD NumType=Card _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 7053 # text = OM10.1, a promyelocyte cell line latently infected with HIV-1, has been developed as a model for studying the mechanism of viral latency and the activation of virus expression. 1 OM Om ADP IN _ _ _ _ SpaceAfter=No 2 10.1 10.1 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 promyelocyte promyelocyte ADJ JJ Degree=Pos _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 line line NOUN NN Number=Sing _ _ _ _ 8 latently latently ADV RB _ _ _ _ _ 9 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 17 developed develop VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 model model NOUN NN Number=Sing _ _ _ _ 21 for for SCONJ IN _ _ _ _ _ 22 studying study VERB VBG VerbForm=Ger _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 viral viral ADJ JJ Degree=Pos _ _ _ _ 27 latency latency NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 virus virus NOUN NN Number=Sing _ _ _ _ 33 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 7054 # text = We found that this latently infected cell line with heat shock at 42 degrees C for 2 h resulted in a high level of HIV-1 production without addition of any cytokines. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 latently latently ADV RB _ _ _ _ _ 6 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 line line NOUN NN Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 heat heat NOUN NN Number=Sing _ _ _ _ 11 shock shock NOUN NN Number=Sing _ _ _ _ 12 at at ADP IN _ _ _ _ _ 13 42 42 NUM CD NumType=Card _ _ _ _ 14 degrees degree NOUN NNS Number=Plur _ _ _ _ 15 C C PROPN NNP Number=Sing _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 2 2 NUM CD NumType=Card _ _ _ _ 18 h h NOUN NN Number=Sing _ _ _ _ 19 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 high high ADJ JJ Degree=Pos _ _ _ _ 23 level level NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 production production NOUN NN Number=Sing _ _ _ _ 29 without without ADP IN _ _ _ _ _ 30 addition addition NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 any any DET DT _ _ _ _ _ 33 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 7055 # text = The mechanism of activation was analyzed by using anti-TNF-alpha antibody and various inhibitors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by SCONJ IN _ _ _ _ _ 8 using use VERB VBG VerbForm=Ger _ _ _ _ 9 anti-TNF anti-tnf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 antibody antibody NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 various various ADJ JJ Degree=Pos _ _ _ _ 15 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 7056 # text = Although the TNF-alpha level in culture supernatants was below the sensitivity of an ELISA assay system, addition of anti-TNF-alpha antibody in culture medium could partially suppress the heat shock induced HIV-1 production. 1 Although although SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 alpha alpha NOUN NN Number=Sing _ _ _ _ 6 level level NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 culture culture NOUN NN Number=Sing _ _ _ _ 9 supernatants supernatant NOUN NNS Number=Plur _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 below below ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 ELISA ELISA PROPN NNP Number=Sing _ _ _ _ 17 assay assay NOUN NN Number=Sing _ _ _ _ 18 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 addition addition NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 anti-TNF anti-tnf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 alpha alpha NOUN NN Number=Sing _ _ _ _ 25 antibody antibody NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 culture culture NOUN NN Number=Sing _ _ _ _ 28 medium medium NOUN NN Number=Sing _ _ _ _ 29 could could AUX MD VerbForm=Fin _ _ _ _ 30 partially partially ADV RB _ _ _ _ _ 31 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 heat heat NOUN NN Number=Sing _ _ _ _ 34 shock shock NOUN NN Number=Sing _ _ _ _ 35 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 1 1 NUM CD NumType=Card _ _ _ _ 39 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 7057 # text = Staurosporine (PKC inhibitor), pentoxifylline (NF-kappa B inhibitor), and Ro5-3335 (HIV-1 1 Staurosporine Staurosporine PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 PKC PKC PROPN NNP Number=Sing _ _ _ _ 4 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 pentoxifylline pentoxifylline NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 Ro5-3335 Ro5-3335 NUM CD NumType=Card _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ # sent_id = 7058 # text = Tat inhibitor) also inhibited significantly the heat shock induced virus activation. 1 Tat Tat ADJ JJ Degree=Pos _ _ _ _ 2 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 significantly significantly ADV RB _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 heat heat NOUN NN Number=Sing _ _ _ _ 9 shock shock NOUN NN Number=Sing _ _ _ _ 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 virus virus NOUN NN Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 7059 # text = In particular, staurosporine achieved approximately 90% inhibition of the HIV-1 antigen expression in heat shock-treated OM10.1 at a non-toxic concentration. 1 In in ADP IN _ _ _ _ _ 2 particular particular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 staurosporine staurosporine PRON PRP _ _ _ _ _ 5 achieved achieve VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 approximately approximately ADV RB _ _ _ _ _ 7 90 90 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 % % SYM NN Number=Sing _ _ _ _ 9 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 antigen antigen NUM CD NumType=Card _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 heat heat NOUN NN Number=Sing _ _ _ _ 19 shock shock NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 OM10.1 Om10.1 NUM CD NumType=Card _ _ _ _ 23 at at ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 non-toxic non-toxic ADJ JJ Degree=Pos _ _ _ _ 26 concentration concentration NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 7060 # text = Although the mechanism of HIV-1 activation with heat shock has not been fully elucidated yet, it is presumed PKC plays an important role in HIV-1 activation. 1 Although although SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 heat heat NOUN NN Number=Sing _ _ _ _ 11 shock shock NOUN NN Number=Sing _ _ _ _ 12 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 15 fully fully ADV RB _ _ _ _ _ 16 elucidated elucidate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 yet yet ADV RB _ _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 presumed presume VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 PKC Pkc PROPN NNP Number=Sing _ _ _ _ 23 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 important important ADJ JJ Degree=Pos _ _ _ _ 26 role role NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 7061 # text = Thus, the present observations will provide a further insight into the pathogenesis of HIV-1 infections. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 present present ADJ JJ Degree=Pos _ _ _ _ 5 observations observation NOUN NNS Number=Plur _ _ _ _ 6 will will AUX MD VerbForm=Fin _ _ _ _ 7 provide provide VERB VB VerbForm=Inf _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 further further ADJ JJ Degree=Pos _ _ _ _ 10 insight insight NOUN NN Number=Sing _ _ _ _ 11 into into ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 infections infection NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7062 # text = Document 003001975 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001975 003001975 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7063 # text = SHP2-interacting transmembrane adaptor protein (SIT), a novel disulfide-linked dimer regulating human T cell activation. 1 SHP2 SHP2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 interacting interact VERB VBG VerbForm=Ger _ _ _ _ 4 transmembrane transmembrane NOUN NN Number=Sing _ _ _ _ 5 adaptor adaptor NOUN NN Number=Sing _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 SIT Sit PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 novel novel NOUN NN Number=Sing _ _ _ _ 13 disulfide disulfide NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 dimer dimer NOUN NN Number=Sing _ _ _ _ 17 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 T T PROPN NNP Number=Sing _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7064 # text = T lymphocytes express several low molecular weight transmembrane adaptor proteins that recruit src homology (SH)2 domain-containing intracellular molecules to the cell membrane via tyrosine-based signaling motifs. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 express express ADJ JJ Degree=Pos _ _ _ _ 4 several several ADJ JJ Degree=Pos _ _ _ _ 5 low low ADJ JJ Degree=Pos _ _ _ _ 6 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 7 weight weight NOUN NN Number=Sing _ _ _ _ 8 transmembrane transmembrane NOUN NN Number=Sing _ _ _ _ 9 adaptor adaptor NOUN NN Number=Sing _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 recruit recruit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 src src ADJ JJ Degree=Pos _ _ _ _ 14 homology homology NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 SH SH NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - SYM SYM _ _ _ _ SpaceAfter=No 21 containing contain VERB VBG VerbForm=Ger _ _ _ _ 22 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 23 molecules molecule NOUN NNS Number=Plur _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 membrane membrane NOUN NN Number=Sing _ _ _ _ 28 via via ADP IN _ _ _ _ _ 29 tyrosine tyrosine NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 signaling signaling NOUN NN Number=Sing _ _ _ _ 33 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 7065 # text = We describe here a novel molecule of this group termed SIT (SHP2 interacting transmembrane adaptor protein). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 describe describe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 novel novel NOUN NN Number=Sing _ _ _ _ 6 molecule molecule NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 9 group group NOUN NN Number=Sing _ _ _ _ 10 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 SIT sit NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 SHP2 Shp2 NUM CD NumType=Card _ _ _ _ 14 interacting interact VERB VBG VerbForm=Ger _ _ _ _ 15 transmembrane transmembrane ADJ JJ Degree=Pos _ _ _ _ 16 adaptor adaptor NOUN NN Number=Sing _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 7066 # text = SIT is a disulfide-linked homodimeric glycoprotein that is expressed in lymphocytes. 1 SIT sit NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 disulfide disulfide NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 homodimeric homodimeric ADJ JJ Degree=Pos _ _ _ _ 8 glycoprotein glycoprotein NOUN NN Number=Sing _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 7067 # text = After tyrosine phosphorylation by src and possibly syk protein tyrosine kinases SIT recruits the SH2 domain-containing tyrosine phosphatase SHP2 via an immunoreceptor tyrosine-based inhibition motif. 1 After after ADP IN _ _ _ _ _ 2 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 3 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 src src NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 possibly possibly ADV RB _ _ _ _ _ 8 syk syk VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 tyrosine tyrosine PRON PRP _ _ _ _ _ 11 kinases kinase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 SIT Sit PROPN NNP Number=Sing _ _ _ _ 13 recruits recruit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 SH2 Sh2 NOUN NN Number=Sing _ _ _ _ 16 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 containing contain VERB VBG VerbForm=Ger _ _ _ _ 19 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 20 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 21 SHP2 SHP2 NUM CD NumType=Card _ _ _ _ 22 via via ADP IN _ _ _ _ _ 23 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 immunoreceptor immunoreceptor ADJ JJ Degree=Pos _ _ _ _ 25 tyrosine tyrosine NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 29 motif. motif. NOUN NN Number=Sing _ _ _ _ # sent_id = 7068 # text = Overexpression of SIT in Jurkat cells downmodulates T cell receptor- and phytohemagglutinin-mediated activation of the nuclear factor of activated T cells (NF-AT) by interfering with signaling processes that are probably located upstream of activation of phospholipase C. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 SIT Sit PROPN NNP Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 downmodulates downmodulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 T t NUM CD NumType=Card _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 phytohemagglutinin- phytohemagglutinin- SYM SYM _ _ _ _ SpaceAfter=No 14 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 by by SCONJ IN _ _ _ _ _ 30 interfering interfere VERB VBG VerbForm=Ger _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 signaling signaling NOUN NN Number=Sing _ _ _ _ 33 processes process NOUN NNS Number=Plur _ _ _ _ 34 that that PRON WDT PronType=Rel _ _ _ _ 35 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 36 probably probably ADV RB _ _ _ _ _ 37 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 upstream upstream NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 activation activation NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 phospholipase phospholipase NOUN NN Number=Sing _ _ _ _ 43 C C NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 7069 # text = However, binding of SHP2 to SIT is not required for inhibition of NF-AT induction, suggesting that SIT not only regulates NF-AT activity but also controls NF-AT unrelated pathways of T cell activation involving SHP2. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 binding binding VERB VBG VerbForm=Ger _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 SHP2 SHP2 NOUN NN Number=Sing _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 SIT Sit PROPN NNP Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 AT at ADP IN _ _ _ _ _ 17 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 SIT Sit PROPN NNP Number=Sing _ _ _ _ 22 not not ADV RB _ _ _ _ _ 23 only only ADV RB _ _ _ _ _ 24 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 AT at ADJ JJ Degree=Pos _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ _ 29 but but CCONJ CC _ _ _ _ _ 30 also also ADV RB _ _ _ _ _ 31 controls control VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 AT at ADP IN _ _ _ _ _ 35 unrelated unrelated ADJ JJ Degree=Pos _ _ _ _ 36 pathways pathway NOUN NNS Number=Plur _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 T t PROPN NNP Number=Sing _ _ _ _ 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 activation activation NOUN NN Number=Sing _ _ _ _ 41 involving involve VERB VBG VerbForm=Ger _ _ _ _ 42 SHP2 Shp2 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7070 # text = Document 003001977 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001977 003001977 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7071 # text = Thiol modulation inhibits the interleukin (IL)-1-mediated activation of an IL-1 receptor-associated protein kinase and NF-kappa B. 1 Thiol Thiol ADJ JJ Degree=Pos _ _ _ _ 2 modulation modulation NOUN NN Number=Sing _ _ _ _ 3 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 kinase kinase NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7072 # text = The interleukin-1 receptor type I (IL-1RI) is associated with other proteins thus forming a complex system by which IL-1 exerts its various signals. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ _ 6 type type NOUN NN Number=Sing _ _ _ _ 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1RI 1RI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 other other ADJ JJ Degree=Pos _ _ _ _ 17 proteins protein NOUN NNS Number=Plur _ _ _ _ 18 thus thus ADV RB _ _ _ _ _ 19 forming form VERB VBG VerbForm=Ger _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 complex complex ADJ JJ Degree=Pos _ _ _ _ 22 system system NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - SYM SYM _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 exerts exert NOUN NNS Number=Plur _ _ _ _ 29 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 30 various various ADJ JJ Degree=Pos _ _ _ _ 31 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 7073 # text = The initiating event is still uncertain, but activation of a recently described receptor-associated protein kinase is one of the earliest events detectable (Martin et al., 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 initiating initiating NOUN NN Number=Sing _ _ _ _ 3 event event NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 still still ADV RB _ _ _ _ _ 6 uncertain uncertain ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 but but CCONJ CC _ _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 recently recently ADV RB _ _ _ _ _ 13 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 kinase kinase NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 one one NUM CD NumType=Card _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 earliest earliest ADJ JJS Degree=Sup _ _ _ _ 24 events event NOUN NNS Number=Plur _ _ _ _ 25 detectable detectable NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 Martin Martin PROPN NNP Number=Sing _ _ _ _ 28 et et X FW _ _ _ _ _ 29 al. al. X FW _ _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ # sent_id = 7074 # text = Eur.J.Immunol.1994.24: 1566). 1 Eur.J.Immunol Eur.J.Immunol PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 .1994.24 .1994.24 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 : : PUNCT : _ _ _ _ _ 4 1566 1566 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 6 . . PUNCT . _ _ _ _ _ # sent_id = 7075 # text = IL-1 signaling is commonly accompanied by oxidative processes and is thought to be subject to redox regulation. 1 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 signaling signaling NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 commonly commonly ADV RB _ _ _ _ _ 7 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 10 processes process NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 subject subject ADJ JJ Degree=Pos _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 redox redox VERB VB VerbForm=Inf _ _ _ _ 19 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 7076 # text = We therefore investigated whether the activation of the IL-1RI-associated protein kinase could be a target for redox regulation and whether an altered activity of the kinase could influence IL-1-mediated NF-kappa B activation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 therefore therefore ADV RB _ _ _ _ _ 3 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 whether whether SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1RI 1RI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 kinase kinase NOUN NN Number=Sing _ _ _ _ 16 could could AUX MD VerbForm=Fin _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 target target NOUN NN Number=Sing _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 redox redox NOUN NN Number=Sing _ _ _ _ 22 regulation regulation NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 whether whether SCONJ IN _ _ _ _ _ 25 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 altered alter ADJ JJ Degree=Pos _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 kinase kinase NOUN NN Number=Sing _ _ _ _ 31 could could AUX MD VerbForm=Fin _ _ _ _ 32 influence influence VERB VB VerbForm=Inf _ _ _ _ 33 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 kappa kappa NOUN NN Number=Sing _ _ _ _ 41 B b NOUN NN Number=Sing _ _ _ _ 42 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 7077 # text = A murine T cell line, EL4, was stimulated with IL-1 with and without pretreatment with different compounds known to influence the cellular redox status. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 murine murine NOUN NN Number=Sing _ _ _ _ 3 T t NOUN NN Number=Sing _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 EL4 EL4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 without without ADP IN _ _ _ _ _ 18 pretreatment pretreatment NOUN NN Number=Sing _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 different different ADJ JJ Degree=Pos _ _ _ _ 21 compounds compound NOUN NNS Number=Plur _ _ _ _ 22 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 influence influence VERB VB VerbForm=Inf _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 27 redox redox NOUN NN Number=Sing _ _ _ _ 28 status status NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 7078 # text = Thiol modifying agents like diamide, menadione, pyrrolidine dithiocarbamate (PDTC), diethyl dithiocarbamate or phenylarsine oxide inhibited the IL-1-induced activation of the IL-1RI-associated protein kinase. 1 Thiol Thiol NOUN NN Number=Sing _ _ _ _ 2 modifying modify VERB VBG VerbForm=Ger _ _ _ _ 3 agents agent NOUN NNS Number=Plur _ _ _ _ 4 like like ADP IN _ _ _ _ _ 5 diamide diamide NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 menadione menadione NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 pyrrolidine pyrrolidine NOUN NN Number=Sing _ _ _ _ 10 dithiocarbamate dithiocarbamate NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 PDTC PDTC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 diethyl diethyl ADJ JJ Degree=Pos _ _ _ _ 16 dithiocarbamate dithiocarbamate NOUN NN Number=Sing _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 phenylarsine phenylarsine NOUN NN Number=Sing _ _ _ _ 19 oxide oxide ADV RB _ _ _ _ _ 20 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1RI 1RI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 protein protein NOUN NN Number=Sing _ _ _ _ 36 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 7079 # text = N-Acetylcysteine, alpha,alpha'-dipyridyl, aminotriazole or nitrofurantoin did not show any effect. 1 N not PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 Acetylcysteine Acetylcysteine PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 alpha alpha INTJ UH _ _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ SpaceAfter=No 7 alpha alpha INTJ UH _ _ _ _ SpaceAfter=No 8 '- '- PUNCT . _ _ _ _ SpaceAfter=No 9 dipyridyl dipyridyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 aminotriazole aminotriazole NOUN NN Number=Sing _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 nitrofurantoin nitrofurantoin NOUN NN Number=Sing _ _ _ _ 14 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 show show VERB VB VerbForm=Inf _ _ _ _ 17 any any DET DT _ _ _ _ _ 18 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 7080 # text = The inhibition by PDTC was reversible unless glutathione synthesis was blocked by buthionine sulfoximine. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 PDTC PDTC PROPN NNP Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 reversible reversible ADJ JJ Degree=Pos _ _ _ _ 7 unless unless SCONJ IN _ _ _ _ _ 8 glutathione glutathione ADJ JJ Degree=Pos _ _ _ _ 9 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 buthionine buthionine NUM CD NumType=Card _ _ _ _ 14 sulfoximine sulfoximine NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 7081 # text = The described conditions which inhibited or prevented the activation of the IL-1RI-associated kinase similarly impaired the activation of NF-kappa B in EL4 cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 conditions condition NOUN NNS Number=Plur _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1RI 1RI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 kinase kinase NOUN NN Number=Sing _ _ _ _ 18 similarly similarly ADV RB _ _ _ _ _ 19 impaired impaire VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa PROPN NNP Number=Sing _ _ _ _ 26 B b PROPN NNP Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 EL4 EL4 PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 7082 # text = From these observations we conclude that free thiols in the IL-1RI complex are essential for the activation of the IL-1RI-associated protein kinase and that this process is mandatory for IL-1 signaling leading to NF-kappa B activation. 1 From from ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 observations observation NOUN NNS Number=Plur _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 free free ADJ JJ Degree=Pos _ _ _ _ 8 thiols thiol NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1RI 1ri NOUN NN Number=Sing _ _ _ _ 14 complex complex NOUN NN Number=Sing _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 essential essential ADJ JJ Degree=Pos _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1RI 1RI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 protein protein NOUN NN Number=Sing _ _ _ _ 28 kinase kinase NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 that that SCONJ IN _ _ _ _ _ 31 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 32 process process NOUN NN Number=Sing _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 mandatory mandatory ADJ JJ Degree=Pos _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT , _ _ _ _ SpaceAfter=No 38 1 1 NUM CD NumType=Card _ _ _ _ 39 signaling signaling NOUN NN Number=Sing _ _ _ _ 40 leading lead VERB VBG VerbForm=Ger _ _ _ _ 41 to to ADP IN _ _ _ _ _ 42 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 kappa kappa NOUN NN Number=Sing _ _ _ _ 45 B b NOUN NN Number=Sing _ _ _ _ 46 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7083 # text = Document 003001988 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001988 003001988 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7084 # text = Cellular and molecular mechanisms of IL-5 synthesis in atopic diseases: a study with allergen-specific human helper T cells. 1 Cellular cellular ADJ JJ Degree=Pos _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 5 5 NUM CD NumType=Card _ _ _ _ 9 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 atopic atopic ADJ JJ Degree=Pos _ _ _ _ 12 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 : : PUNCT : _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 study study NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 allergen allergen NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT : _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 helper helper NOUN NN Number=Sing _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7085 # text = BACKGROUND: Cytokines produced by helper T cells are intimately involved in chronic allergic diseases associated with eosinophilic inflammation. 1 BACKGROUND background NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Cytokines Cytokine NOUN NNS Number=Plur _ _ _ _ 4 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 helper helper ADJ JJR Degree=Cmp _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 intimately intimately ADV RB _ _ _ _ _ 11 involved involved ADJ JJ Degree=Pos _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 14 allergic allergic ADJ JJ Degree=Pos _ _ _ _ 15 diseases diseasis NOUN NNS Number=Plur _ _ _ _ 16 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 eosinophilic eosinophilic ADJ JJ Degree=Pos _ _ _ _ 19 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 7086 # text = OBJECTIVE: 1 OBJECTIVE objective NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 7087 # text = We investigated the production of IL-5, a potent growth factor and chemotactic factor for eosinophils, by CD4+ T lymphocytes in patients with asthma. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 production production NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 potent potent NOUN NN Number=Sing _ _ _ _ 12 growth growth NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 chemotactic chemotactic ADJ JJ Degree=Pos _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 + + SYM SYM _ _ _ _ _ 23 T t NUM CD NumType=Card _ _ _ _ 24 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 patients patient NOUN NNS Number=Plur _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 asthma asthma NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 7088 # text = METHODS: Allergen-specific 1 METHODS method NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Allergen Allergen PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 -specific -specific ADJ JJ Degree=Pos _ _ _ _ # sent_id = 7089 # text = T cell clones and T cell hybridomas were established from the peripheral blood lymphocytes of patients with asthma, and the responses to various stimuli were determined. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 clones clone NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cell cell PROPN NNP Number=Sing _ _ _ _ 7 hybridomas hybridoma AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 established establish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 13 blood blood NOUN NN Number=Sing _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 patients patient NOUN NNS Number=Plur _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 asthma asthma NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 responses response NOUN NNS Number=Plur _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 various various ADJ JJ Degree=Pos _ _ _ _ 25 stimuli stimuli NOUN NNS Number=Plur _ _ _ _ 26 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 determined determin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 7090 # text = RESULTS: After nonspecific stimulation, IL-5 production by CD4+ T cells from both atopic and nonatopic subjects with asthma was significantly enhanced compared with that by cells from healthy controls. 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 After after ADP IN _ _ _ _ _ 4 nonspecific nonspecific ADJ JJ Degree=Pos _ _ _ _ 5 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 5 5 NUM CD NumType=Card _ _ _ _ 10 production production NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 + + SYM SYM _ _ _ _ _ 14 T t NUM CD NumType=Card _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 from from ADP IN _ _ _ _ _ 17 both both CCONJ CC _ _ _ _ _ 18 atopic atopic ADJ JJ Degree=Pos _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 nonatopic nonatopic ADJ JJ Degree=Pos _ _ _ _ 21 subjects subject NOUN NNS Number=Plur _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 asthma asthma NOUN NN Number=Sing _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 significantly significantly ADV RB _ _ _ _ _ 26 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 from from ADP IN _ _ _ _ _ 33 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 34 controls control NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 7091 # text = Peripheral blood mononuclear cells from atopic asthma patients both proliferated and produced IL-5 after incubation with mite allergen, suggesting that mite-specific helper T cells were involved in the eosinophilic inflammation of atopic asthma. 1 Peripheral Peripheral ADJ JJ Degree=Pos _ _ _ _ 2 blood blood NOUN NN Number=Sing _ _ _ _ 3 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 atopic atopic ADJ JJ Degree=Pos _ _ _ _ 7 asthma asthma NOUN NN Number=Sing _ _ _ _ 8 patients patient NOUN NNS Number=Plur _ _ _ _ 9 both both CCONJ CC _ _ _ _ _ 10 proliferated proliferate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 5 5 NUM CD NumType=Card _ _ _ _ 16 after after ADP IN _ _ _ _ _ 17 incubation incubation NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 mite mite NOUN NN Number=Sing _ _ _ _ 20 allergen allergen NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 mite mite ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 specific specific ADJ JJ Degree=Pos _ _ _ _ 27 helper helper NOUN NN Number=Sing _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 involved involved ADJ JJ Degree=Pos _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 eosinophilic eosinophilic ADJ JJ Degree=Pos _ _ _ _ 35 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 atopic atopic ADJ JJ Degree=Pos _ _ _ _ 38 asthma asthma NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 7092 # text = A human IL-5 promoter/enhancer luciferase gene construct transfected into IL-5-producing T cell clones was clearly transcribed after stimulation, indicating that the 515 base pair IL-5 gene segment upstream of the coding region was sufficient to respond to activating signals in human helper T cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 5 5 NUM CD NumType=Card _ _ _ _ 6 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 9 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 construct construct NOUN NN Number=Sing _ _ _ _ 12 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 into into ADP IN _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 producing produce VERB VBG VerbForm=Ger _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 clones clone NOUN NNS Number=Plur _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 clearly clearly ADV RB _ _ _ _ _ 24 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 after after ADP IN _ _ _ _ _ 26 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 29 that that SCONJ IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 515 515 NUM CD NumType=Card _ _ _ _ 32 base base NOUN NN Number=Sing _ _ _ _ 33 pair pair NOUN NN Number=Sing _ _ _ _ 34 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 5 5 NUM CD NumType=Card _ _ _ _ 37 gene gene NOUN NN Number=Sing _ _ _ _ 38 segment segment NOUN NN Number=Sing _ _ _ _ 39 upstream upstream NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 coding coding NOUN NN Number=Sing _ _ _ _ 43 region region NOUN NN Number=Sing _ _ _ _ 44 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 45 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 46 to to PART TO _ _ _ _ _ 47 respond respond VERB VB VerbForm=Inf _ _ _ _ 48 to to ADP IN _ _ _ _ _ 49 activating activating VERB VBG VerbForm=Ger _ _ _ _ 50 signals signal NOUN NNS Number=Plur _ _ _ _ 51 in in ADP IN _ _ _ _ _ 52 human human ADJ JJ Degree=Pos _ _ _ _ 53 helper helper NOUN NN Number=Sing _ _ _ _ 54 T t PROPN NNP Number=Sing _ _ _ _ 55 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 7093 # text = The same gene segment was not transcribed in IL-5-nonproducing T cell clones, suggesting that human T cell IL-5 synthesis is regulated at the transcriptional level. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 same same ADJ JJ Degree=Pos _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ _ 4 segment segment NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 nonproducing nonproduce VERB VBG VerbForm=Ger _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 T T PROPN NNP Number=Sing _ _ _ _ 22 cell cell PROPN NNP Number=Sing _ _ _ _ 23 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 5 5 NUM CD NumType=Card _ _ _ _ 26 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 at at ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 32 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 7094 # text = Experiments with T cell hybridomas confirmed these findings and suggested that a unique transcription factor may be essential for human IL-5 gene transcription. 1 Experiments Experiment NOUN NNS Number=Plur _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cell cell PROPN NNP Number=Sing _ _ _ _ 5 hybridomas hybridoma AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 confirmed confirm VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 findings finding NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 unique unique ADJ JJ Degree=Pos _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 may may AUX MD VerbForm=Fin _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 essential essential ADJ JJ Degree=Pos _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 5 5 NUM CD NumType=Card _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 7095 # text = CONCLUSION: Enhanced IL-5 production by helper T cells seems to cause the eosinophilic inflammation of both atopic and nonatopic asthma. 1 CONCLUSION conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Enhanced enhance PROPN NNP Number=Sing _ _ _ _ 4 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 5 5 NUM CD NumType=Card _ _ _ _ 7 production production NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 helper helper ADJ JJR Degree=Cmp _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 cause cause VERB VB VerbForm=Inf _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 eosinophilic eosinophilic ADJ JJ Degree=Pos _ _ _ _ 17 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 both both CCONJ CC _ _ _ _ _ 20 atopic atopic ADJ JJ Degree=Pos _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 nonatopic nonatopic ADJ JJ Degree=Pos _ _ _ _ 23 asthma asthma NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 7096 # text = Elucidation of IL-5-specific regulatory mechanisms may facilitate the development of novel treatments for allergic diseases associated with eosinophilic inflammation. 1 Elucidation Elucidation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 9 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 10 may may AUX MD VerbForm=Fin _ _ _ _ 11 facilitate facilitate VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 development development NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 novel novel NOUN NN Number=Sing _ _ _ _ 16 treatments treatment NOUN NNS Number=Plur _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 allergic allergic ADJ JJ Degree=Pos _ _ _ _ 19 diseases diseasis NOUN NNS Number=Plur _ _ _ _ 20 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 eosinophilic eosinophilic ADJ JJ Degree=Pos _ _ _ _ 23 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7097 # text = Document 003001990 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 003001990 003001990 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7098 # text = Renal cell carcinoma-derived gangliosides suppress nuclear factor-kappaB activation in T cells. 1 Renal renal ADJ JJ Degree=Pos _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 carcinoma carcinoma NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 gangliosides ganglioside NOUN NNS Number=Plur _ _ _ _ 7 suppress suppress VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 factor-kappaB factor-kappab NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7099 # text = Activation of the transcription factor nuclear factor-kappaB (NFkappaB) is impaired in T cells from patients with renal cell carcinomas (RCCs). 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 impaired impaire VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 patients patient NOUN NNS Number=Plur _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 renal renal ADJ JJ Degree=Pos _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 carcinomas carcinoma NOUN NNS Number=Plur _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 RCCs RCC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 7100 # text = In circulating T cells from a subset of patients with RCCs, the suppression of NFkappaB binding activity is downstream from the stimulus-induced degradation of the cytoplasmic factor IkappaBalpha. 1 In in SCONJ IN _ _ _ _ _ 2 circulating circulat VERB VBG VerbForm=Ger _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 subset subset NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 patients patient NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 RCCs RCC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 suppression suppression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 17 binding binding VERB VBG VerbForm=Ger _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 stimulus stimulus NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 degradation degradation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ _ 31 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 7101 # text = Tumor-derived soluble products from cultured RCC explants inhibit NFkappaB activity in T cells from healthy volunteers, despite a normal level of stimulus-induced IkappaBalpha degradation in these cells. 1 Tumor tumor NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 5 products product NOUN NNS Number=Plur _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 cultured culture ADJ JJ Degree=Pos _ _ _ _ 8 RCC RCC PROPN NNP Number=Sing _ _ _ _ 9 explants explant NOUN NNS Number=Plur _ _ _ _ 10 inhibit inhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 NFkappaB Nfkappab ADJ JJ Degree=Pos _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 from from ADP IN _ _ _ _ _ 17 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 18 volunteers volunteer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 despite despite ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 normal normal ADJ JJ Degree=Pos _ _ _ _ 23 level level NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 stimulus stimulus NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 29 degradation degradation NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 7102 # text = The inhibitory agent has several features characteristic of a ganglioside, including sensitivity to neuraminidase but not protease treatment; hydrophobicity; and molecular weight less than 3 kDa. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 3 agent agent NOUN NN Number=Sing _ _ _ _ 4 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 several several ADJ JJ Degree=Pos _ _ _ _ 6 features feature NOUN NNS Number=Plur _ _ _ _ 7 characteristic characteristic NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 ganglioside ganglioside NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 including include VERB VBG VerbForm=Ger _ _ _ _ 13 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 neuraminidase neuraminidase NOUN NN Number=Sing _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 not not PART RB _ _ _ _ _ 18 protease protease VERB VB VerbForm=Inf _ _ _ _ 19 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ; ; PUNCT , _ _ _ _ _ 21 hydrophobicity hydrophobicity NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ; ; PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 25 weight weight NOUN NN Number=Sing _ _ _ _ 26 less less ADV RBR Degree=Cmp _ _ _ _ 27 than than ADP IN _ _ _ _ _ 28 3 3 NUM CD NumType=Card _ _ _ _ 29 kDa kDa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 7103 # text = Indeed, we detected gangliosides in supernatants from RCC explants and not from adjacent normal kidney tissue. 1 Indeed indeed ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 detected detect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 gangliosides ganglioside NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 supernatants supernatant NOUN NNS Number=Plur _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 RCC RCC PROPN NNP Number=Sing _ _ _ _ 10 explants explant NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 not not ADV RB _ _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 15 normal normal ADJ JJ Degree=Pos _ _ _ _ 16 kidney kidney NOUN NN Number=Sing _ _ _ _ 17 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 7104 # text = Gangliosides prepared from RCC supernatants, as well as the purified bovine gangliosides G(m1) and G(d1a), suppressed NFkappaB binding activity in T cells and reduced expression of the cytokines IL-2 and IFN-gamma. 1 Gangliosides Gangliosides NOUN NNS Number=Plur _ _ _ _ 2 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 RCC RCC PROPN NNP Number=Sing _ _ _ _ 5 supernatants supernatant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 as as ADV RB _ _ _ _ _ 8 well well ADV RB Degree=Pos _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 bovine bovine NOUN NN Number=Sing _ _ _ _ 13 gangliosides ganglioside NOUN NNS Number=Plur _ _ _ _ 14 G( G( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 m1 m1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 G G NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 d1a d1a NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 NFkappaB Nfkappab PROPN NNP Number=Sing _ _ _ _ 25 binding binde VERB VBG VerbForm=Ger _ _ _ _ 26 activity activity NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 T T PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 36 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 2 2 NUM CD NumType=Card _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 7105 # text = Taken together, our findings suggest that tumor-derived gangliosides may blunt antitumor immune responses in patients with RCCs. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 5 findings finding NOUN NNS Number=Plur _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 tumor tumor NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 gangliosides ganglioside NOUN NNS Number=Plur _ _ _ _ 12 may may AUX MD VerbForm=Fin _ _ _ _ 13 blunt blunt VERB VB VerbForm=Inf _ _ _ _ 14 antitumor antitumor ADP IN _ _ _ _ _ 15 immune immune ADJ JJ Degree=Pos _ _ _ _ 16 responses response NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 patients patient NOUN NNS Number=Plur _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 RCCs RCC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7106 # text = Document 0030011000 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011000 0030011000 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7107 # text = 3-deazaadenosine, a S-adenosylhomocysteine hydrolase inhibitor, has dual effects on NF-kappaB regulation. 1 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 deazaadenosine deazaadenosine NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 S- S- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 adenosylhomocysteine adenosylhomocysteine NOUN NN Number=Sing _ _ _ _ 8 hydrolase hydrolase NOUN NN Number=Sing _ _ _ _ 9 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 dual dual ADJ JJ Degree=Pos _ _ _ _ 13 effects effect NOUN NNS Number=Plur _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 18 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 7108 # text = Inhibition of NF-kappaB transcriptional activity and promotion of IkappaBalpha degradation. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 promotion promotion NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 12 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7109 # text = Previously we reported that 3-deazaadenosine (DZA), a potent inhibitor and substrate for S-adenosylhomocysteine hydrolase inhibits bacterial lipopolysaccharide-induced transcription of tumor necrosis factor-alpha and interleukin-1beta in mouse macrophage RAW 264.7 cells. 1 Previously previously ADV RB _ _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 deazaadenosine deazaadenosine NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 DZA DZA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 potent potent NOUN NN Number=Sing _ _ _ _ 14 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 substrate substrate NOUN NN Number=Sing _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 S-adenosylhomocysteine S-adenosylhomocysteine ADJ JJ Degree=Pos _ _ _ _ 19 hydrolase hydrolase NOUN NN Number=Sing _ _ _ _ 20 inhibits inhibits NOUN NNS Number=Plur _ _ _ _ 21 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 22 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 tumor tumor NOUN NN Number=Sing _ _ _ _ 28 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 29 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 alpha alpha NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 interleukin interleukin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 34 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 beta beta NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 mouse mouse NOUN NN Number=Sing _ _ _ _ 38 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 39 RAW RAW PROPN NNP Number=Sing _ _ _ _ 40 264.7 264.7 NUM CD NumType=Card _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 7110 # text = In this study, we demonstrate the effects of DZA on nuclear factor-kappaB (NF-kappaB) regulation. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 effects effect NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 DZA DZa NOUN NN Number=Sing _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 -kappaB -kappaB NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 7111 # text = DZA inhibits the transcriptional activity of NF-kappaB through the hindrance of p65 (Rel-A) phosphorylation without reduction of its nuclear translocation and DNA binding activity. 1 DZA DZA PROPN NNP Number=Sing _ _ _ _ 2 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 through through ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 hindrance hindrance NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 p65 p65 NUM CD NumType=Card _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 21 without without ADP IN _ _ _ _ _ 22 reduction reduction NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 25 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 26 translocation translocation NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 DNA dna NOUN NN Number=Sing _ _ _ _ 29 binding binding VERB VBG VerbForm=Ger _ _ _ _ 30 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 7112 # text = The inhibitory effect of DZA on NF-kappaB transcriptional activity is potentiated by the addition of homocysteine. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 3 effect effect NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 DZA DZA PROPN NNP Number=Sing _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 potentiated potentiate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 addition addition NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 homocysteine homocysteine NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 7113 # text = Taken together, DZA promotes the proteolytic degradation of IkappaBalpha, but not IkappaBbeta, resulting in an increase of DNA binding activity of NF-kappaB in the nucleus in the absence of its transcriptional activity in RAW 264.7 cells. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 DZA DZA PROPN NNP Number=Sing _ _ _ _ 5 promotes promote VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 proteolytic proteolytic ADJ JJ Degree=Pos _ _ _ _ 8 degradation degradation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 not not ADV RB _ _ _ _ _ 14 IkappaBbeta IkappaBbeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 resulting result VERB VBG VerbForm=Ger _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 increase increase NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 DNA dna NOUN NN Number=Sing _ _ _ _ 22 binding binde VERB VBG VerbForm=Ger _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 absence absence NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 36 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 37 activity activity NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 RAW RAW PROPN NNP Number=Sing _ _ _ _ 40 264.7 264.7 NUM CD NumType=Card _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 7114 # text = The reduction of IkappaBalpha by DZA is neither involved in IkappaB kinase complex activation nor modulated by the addition of homocysteine. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 reduction reduction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 DZA DZA PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 neither neither ADV RB _ _ _ _ _ 9 involved involve ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 IkappaB Ikappab ADJ JJ Degree=Pos _ _ _ _ 12 kinase kinase NOUN NN Number=Sing _ _ _ _ 13 complex complex NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 nor nor CCONJ CC _ _ _ _ _ 16 modulated modulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 addition addition NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 homocysteine homocysteine NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 7115 # text = This study strongly suggests that DZA may be a potent drug for the treatment of diseases in which NF-kappaB plays a central pathogenic role, as well as a useful tool for studying the regulation and physiological functions of NF-kappaB. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 strongly strongly ADV RB _ _ _ _ _ 4 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 DZA DZA PROPN NNP Number=Sing _ _ _ _ 7 may may AUX MD VerbForm=Fin _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 potent potent NOUN NN Number=Sing _ _ _ _ 11 drug drug NOUN NN Number=Sing _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 treatment treatment NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 diseases disease NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 22 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 central central ADJ JJ Degree=Pos _ _ _ _ 25 pathogenic pathogenic NOUN NN Number=Sing _ _ _ _ 26 role role NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 as as ADV RB _ _ _ _ _ 29 well well ADV RB Degree=Pos _ _ _ _ 30 as as ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 useful useful ADJ JJ Degree=Pos _ _ _ _ 33 tool tool NOUN NN Number=Sing _ _ _ _ 34 for for SCONJ IN _ _ _ _ _ 35 studying study VERB VBG VerbForm=Ger _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 regulation regulation NOUN NN Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 physiological physiological ADJ JJ Degree=Pos _ _ _ _ 40 functions function NOUN NNS Number=Plur _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7116 # text = Document 0030011002 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011002 0030011002 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7117 # text = Inducible binding to the c-fos serum response element during T cell activation is regulated by a phosphotyrosine-containing protein. 1 Inducible Inducible ADJ JJ Degree=Pos _ _ _ _ 2 binding bind VERB VBG VerbForm=Ger _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 fos fos NOUN NN Number=Sing _ _ _ _ 8 serum serum NOUN NN Number=Sing _ _ _ _ 9 response response NOUN NN Number=Sing _ _ _ _ 10 element element NOUN NN Number=Sing _ _ _ _ 11 during during ADP IN _ _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 phosphotyrosine phosphotyrosine NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 containing containing VERB VBG VerbForm=Ger _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7118 # text = The proto-oncogene c-fos is an immediate-early gene, and one of the first genes transcribed after stimulation of most cells with a variety of ligands. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 -oncogene -oncogene NOUN NN Number=Sing _ _ _ _ 4 c- c- PUNCT : _ _ _ _ SpaceAfter=No 5 fos fos NOUN NNS Number=Plur _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 early early ADJ JJ Degree=Pos _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 one one NUM CD NumType=Card _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 18 genes gene NOUN NNS Number=Plur _ _ _ _ 19 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 after after ADP IN _ _ _ _ _ 21 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 most most ADJ JJS Degree=Sup _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 variety variety NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 ligands ligand NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 7119 # text = Fos expression may be a pivotal event in converting ligand-receptor interactions at the membrane into functional modulation of cell phenotype. 1 Fos Fos ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 may may AUX MD VerbForm=Fin _ _ _ _ 4 be be AUX VB VerbForm=Inf _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 pivotal pivotal ADJ JJ Degree=Pos _ _ _ _ 7 event event NOUN NN Number=Sing _ _ _ _ 8 in in SCONJ IN _ _ _ _ _ 9 converting converte VERB VBG VerbForm=Ger _ _ _ _ 10 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 interactions interaction NOUN NNS Number=Plur _ _ _ _ 14 at at ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 membrane membrane NOUN NN Number=Sing _ _ _ _ 17 into into ADP IN _ _ _ _ _ 18 functional functional ADJ JJ Degree=Pos _ _ _ _ 19 modulation modulation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 phenotype phenotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 7120 # text = The serum response element (SRE) in the c-fos regulatory region participates in induction of transcription by various growth factors and by phorbol esters and subsequent squelching of transcription. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 serum serum NOUN NN Number=Sing _ _ _ _ 3 response response NOUN NN Number=Sing _ _ _ _ 4 element element NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 SRE SRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 fos fos NOUN NNS Number=Plur _ _ _ _ 13 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 14 region region NOUN NN Number=Sing _ _ _ _ 15 participates participate NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 induction induction NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 various various ADJ JJ Degree=Pos _ _ _ _ 22 growth growth NOUN NN Number=Sing _ _ _ _ 23 factors factor NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 27 esters ester NOUN NNS Number=Plur _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 30 squelching squelching NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 7121 # text = We show that an inducible protein complex (Band A) binds to SRE DNA within 10 min after mitogenic stimulation of human PBL-T, and becomes nondetectable by 60 min. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 complex complex NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 Band Band PROPN NNP Number=Sing _ _ _ _ 10 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 SRE SRE VERB VB VerbForm=Inf _ _ _ _ 15 DNA Dna NOUN NN Number=Sing _ _ _ _ 16 within within ADP IN _ _ _ _ _ 17 10 10 NUM CD NumType=Card _ _ _ _ 18 min min NOUN NNS Number=Plur _ _ _ _ 19 after after ADP IN _ _ _ _ _ 20 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 21 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 PBL PBL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 T t PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 becomes become VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 nondetectable nondetectable ADJ JJ Degree=Pos _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 60 60 NUM CD NumType=Card _ _ _ _ 33 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 7122 # text = Band 1 Band band PROPN NNP Number=Sing _ _ _ _ # sent_id = 7123 # text = A contains the serum response factor plus additional factor(s). 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 serum serum NOUN NN Number=Sing _ _ _ _ 5 response response NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 plus plus CCONJ CC _ _ _ _ _ 8 additional additional ADJ JJ Degree=Pos _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 s s X AFX _ _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 7124 # text = A protein that is phosphorylated on a tyrosine residue in resting PBL-T suppresses binding of a component of Band A to the SRE motif. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 that that PRON WDT PronType=Rel _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 9 residue residue NOUN NN Number=Sing _ _ _ _ 10 in in SCONJ IN _ _ _ _ _ 11 resting rest VERB VBG VerbForm=Ger _ _ _ _ 12 PBL PBL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 T T PROPN NNP Number=Sing _ _ _ _ 15 suppresses suppress NOUN NNS Number=Plur _ _ _ _ 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 component component NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 Band Band PROPN NNP Number=Sing _ _ _ _ 22 A a PROPN NNP Number=Sing _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 SRE SRE PROPN NNP Number=Sing _ _ _ _ 26 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 7125 # text = Upon stimulation of the cells, this protein no longer prevents binding of DNA by Band A, and suppression of binding is restored within 30 min. 1 Upon upon ADP IN _ _ _ _ _ 2 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 no no ADV RB _ _ _ _ _ 10 longer longer ADV RBR Degree=Cmp _ _ _ _ 11 prevents prevent NOUN NNS Number=Plur _ _ _ _ 12 binding bind VERB VBG VerbForm=Ger _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 DNA dna NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 Band Band PROPN NNP Number=Sing _ _ _ _ 17 A A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 suppression suppression NOUN NN Number=Sing _ _ _ _ 21 of of SCONJ IN _ _ _ _ _ 22 binding binding VERB VBG VerbForm=Ger _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 restored restore VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 within within ADP IN _ _ _ _ _ 26 30 30 NUM CD NumType=Card _ _ _ _ 27 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 7126 # text = The phosphorylated tyrosine residue itself is important for the protein-protein interaction. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 4 residue residue NOUN NN Number=Sing _ _ _ _ 5 itself itself PRON PRP Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 important important ADJ JJ Degree=Pos _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 interaction interaction NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7127 # text = Document 0030011007 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011007 0030011007 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7128 # text = Rel/NF-kappaB can trigger the Notch signaling pathway by inducing the expression of Jagged1, a ligand for Notch receptors. 1 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 / / PUNCT , _ _ _ _ SpaceAfter=No 3 NF-kappaB NF-kappaB PROPN NNP Number=Sing _ _ _ _ 4 can can AUX MD VerbForm=Fin _ _ _ _ 5 trigger trigger VERB VB VerbForm=Inf _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 Notch notch NOUN NN Number=Sing _ _ _ _ 8 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 9 pathway pathway NOUN NN Number=Sing _ _ _ _ 10 by by SCONJ IN _ _ _ _ _ 11 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 Jagged1 Jagged1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 ligand ligand NOUN NN Number=Sing _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 Notch notch PROPN NNP Number=Sing _ _ _ _ 21 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7129 # text = Jagged1 belongs to the DSL family of ligands for Notch receptors that control the proliferation and differentiation of various cell lineages. 1 Jagged1 Jagged1 PROPN NNP Number=Sing _ _ _ _ 2 belongs belong VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 DSL dsl NOUN NN Number=Sing _ _ _ _ 6 family family NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 ligands ligand NOUN NNS Number=Plur _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 Notch notch ADJ JJ Degree=Pos _ _ _ _ 11 receptors receptor NOUN NNS Number=Plur _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 control control VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 various various ADJ JJ Degree=Pos _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 7130 # text = However, little is known about the transcription factors that regulate its expression. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 little little ADJ JJ Degree=Pos _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 about about ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factors factor NOUN NNS Number=Plur _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 7131 # text = Here, we show that Jagged1 is a Rel/NF-kappaB-responsive gene. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 Jagged1 Jagged1 PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 Rel/ rel/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 7132 # text = Both c-Rel and RelA induced jagged1 gene expression, whereas a mutant defective for transactivation did not. 1 Both both DET DT _ _ _ _ _ 2 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 Rel Rel NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 RelA RelA NOUN NN Number=Sing _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 jagged jag VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 whereas whereas SCONJ IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 16 defective defective NOUN NN Number=Sing _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 19 did do VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 not not PART RB _ _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 7133 # text = Importantly, jagged1 transcripts were also upregulated by endogenous NF-kappaB activation and this effect was inhibited by a dominant mutant of IkappaBalpha, a physiological inhibitor of NF-kappaB. 1 Importantly importantly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 jagged jag VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 upregulated upregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 17 effect effect NOUN NN Number=Sing _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 23 mutant mutant NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 physiological physiological ADJ JJ Degree=Pos _ _ _ _ 29 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 7134 # text = Cell surface expression of Jagged1 in c-Rel-expressing cell monolayers led to a functional interaction with lymphocytes expressing the Notch1/TAN-1 receptor. 1 Cell cell NOUN NN Number=Sing _ _ _ _ 2 surface surface NOUN NN Number=Sing _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Jagged1 Jagged1 PROPN NNP Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 -expressing -expresse NOUN NN Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 monolayers monolayer NOUN NNS Number=Plur _ _ _ _ 13 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 functional functional ADJ JJ Degree=Pos _ _ _ _ 17 interaction interaction NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 20 expressing express VERB VBG VerbForm=Ger _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 Notch1 notch1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 / / PUNCT , _ _ _ _ SpaceAfter=No 24 TAN Tan NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 7135 # text = This correlated with the initiation of signaling downstream of Notch, as evidenced by increased levels of HES-1 transcripts in co-cultivated T cells and of CD23 transcripts in co-cultivated B cells. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 correlated correlate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 initiation initiation NOUN NN Number=Sing _ _ _ _ 6 of of SCONJ IN _ _ _ _ _ 7 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 8 downstream downstream NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 Notch notch PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 as as SCONJ IN _ _ _ _ _ 13 evidenced evidence VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 levels level NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 HES he NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 co-cultivated co-cultivated ADJ JJ Degree=Pos _ _ _ _ 24 T T PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 CD23 CD23 NOUN NN Number=Sing _ _ _ _ 29 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 co-cultivated co-cultivated ADJ JJ Degree=Pos _ _ _ _ 32 B b ADJ JJ Degree=Pos _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 7136 # text = Consistent with its Rel/NF-kappaB-dependent induction, Jagged1 was found to be highly expressed in splenic B cells where c-Rel is expressed constitutively. 1 Consistent consistent ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 4 Rel/NF Rel/NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 Jagged1 Jagged1 PROPN NNP Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 highly highly ADV RB _ _ _ _ _ 17 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 splenic splenic ADJ JJ Degree=Pos _ _ _ _ 20 B b ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 where where ADV WRB PronType=Rel _ _ _ _ 23 c- c- SYM NFP _ _ _ _ SpaceAfter=No 24 Rel Rel PROPN NNP Number=Sing _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 constitutively constitutively ADV RB _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 7137 # text = These results demonstrate that c-Rel can trigger the Notch signaling pathway in neighboring cells by inducing jagged1 gene expression, and suggest a role for Jagged1 in B-cell activation, differentiation or function. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 c- c- SYM NFP _ _ _ _ SpaceAfter=No 6 Rel Rel NOUN NN Number=Sing _ _ _ _ 7 can can AUX MD VerbForm=Fin _ _ _ _ 8 trigger trigger VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 Notch notch NOUN NN Number=Sing _ _ _ _ 11 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 12 pathway pathway NOUN NN Number=Sing _ _ _ _ 13 in in SCONJ IN _ _ _ _ _ 14 neighboring neighbore VERB VBG VerbForm=Ger _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 by by SCONJ IN _ _ _ _ _ 17 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 18 jagged jag VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 role role NOUN NN Number=Sing _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 Jagged1 Jagged1 PROPN NNP Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 36 or or CCONJ CC _ _ _ _ _ 37 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 7138 # text = These findings also highlight the potential for an interplay between the Notch and NF-kappaB signaling pathways in the immune system. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 highlight highlight VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 potential potential NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 interplay interplay NOUN NN Number=Sing _ _ _ _ 10 between between ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 Notch notch PROPN NNP Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 17 signaling signaling VERB VBG VerbForm=Ger _ _ _ _ 18 pathways pathway NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 immune immune ADJ JJ Degree=Pos _ _ _ _ 22 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7139 # text = Document 0030011012 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011012 0030011012 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7140 # text = Transcription factor AP-2 activates gene expression of HTLV-I. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 activates activate NOUN NNS Number=Plur _ _ _ _ 7 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7141 # text = The HTLV-I LTR contains three conserved regulatory elements known as 21 base pair repeats which are required for stimulation of gene expression by the transactivator protein tax. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 5 LTR LTR PROPN NNP Number=Sing _ _ _ _ 6 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 three three NUM CD NumType=Card _ _ _ _ 8 conserved conserved VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 10 elements element NOUN NNS Number=Plur _ _ _ _ 11 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 21 21 NUM CD NumType=Card _ _ _ _ 14 base base NOUN NN Number=Sing _ _ _ _ 15 pair pair NOUN NN Number=Sing _ _ _ _ 16 repeats repeat NOUN NNS Number=Plur _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 28 protein protein NOUN NN Number=Sing _ _ _ _ 29 tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 7142 # text = Mutagenesis indicates that the 21 bp repeats can be subdivided into three motifs, A, B and C, each of which influences the level of tax activation. 1 Mutagenesis Mutagenesis PROPN NNP Number=Sing _ _ _ _ 2 indicates indicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 21 21 NUM CD NumType=Card _ _ _ _ 6 bp bp NOUN NN Number=Sing _ _ _ _ 7 repeats repeat NOUN NNS Number=Plur _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 subdivided subdivide VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 into into ADP IN _ _ _ _ _ 12 three three NUM CD NumType=Card _ _ _ _ 13 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 A a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 B b PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 C c PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 each each DET DT _ _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 influences influence VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 level level NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 tax tax NOUN NN Number=Sing _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 7143 # text = The A site in the 21 bp repeat has strong homology with previously described binding sites for the transcription factor AP-2. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 site site NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 21 21 NUM CD NumType=Card _ _ _ _ 7 bp bp NOUN NN Number=Sing _ _ _ _ 8 repeat repeat NOUN NN Number=Sing _ _ _ _ 9 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 strong strong ADJ JJ Degree=Pos _ _ _ _ 11 homology homology NOUN NN Number=Sing _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 previously previously ADV RB _ _ _ _ _ 14 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 binding binding VERB VBG VerbForm=Ger _ _ _ _ 16 sites site NOUN NNS Number=Plur _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 7144 # text = We demonstrated that AP-2 mRNA was present in T-lymphocytes and that cellular factors from both non-transformed and transformed T-lymphocytes specifically bound to the consensus motif for AP-2 in each 21 bp. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 present present ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 16 factors factor NOUN NNS Number=Plur _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 both both CCONJ CC _ _ _ _ _ 19 non-transformed non-transformed VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 24 specifically specifically ADV RB _ _ _ _ _ 25 bound bound ADJ JJ Degree=Pos _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 consensus consensus NOUN NN Number=Sing _ _ _ _ 29 motif motif NOUN NN Number=Sing _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 AP Ap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 2 2 NUM CD NumType=Card _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 each each DET DT _ _ _ _ _ 36 21 21 NUM CD NumType=Card _ _ _ _ 37 bp bp NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 7145 # text = To determine the role of AP-2 in the regulation of the HTLV-I LTR gene expression, we used an AP-2 cDNA in DNA binding and transient expression assays. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 regulation regulation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 HTLV Htlv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 17 LTR Ltr VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 gene gene ADJ JJ Degree=Pos _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 22 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ _ 27 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 DNA dna NOUN NN Number=Sing _ _ _ _ 30 binding binding NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 transient transient NOUN NN Number=Sing _ _ _ _ 33 expression expression NOUN NN Number=Sing _ _ _ _ 34 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 7146 # text = Gel retardation and methylation interference studies revealed that bacterially produced AP-2 bound specifically and with high affinity to all three 21 bp repeats, and that it required the core sequence AGGC for specific binding. 1 Gel gel NOUN NN Number=Sing _ _ _ _ 2 retardation retardation NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 methylation methylation NOUN NN Number=Sing _ _ _ _ 5 interference interference NOUN NN Number=Sing _ _ _ _ 6 studies study NOUN NNS Number=Plur _ _ _ _ 7 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 bacterially bacterially ADV RB _ _ _ _ _ 10 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 bound bound NOUN NN Number=Sing _ _ _ _ 15 specifically specifically ADV RB _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 high high ADJ JJ Degree=Pos _ _ _ _ 19 affinity affinity NOUN NN Number=Sing _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 all all DET DT _ _ _ _ _ 22 three three NUM CD NumType=Card _ _ _ _ 23 21 21 NUM CD NumType=Card _ _ _ _ 24 bp bp NOUN NN Number=Sing _ _ _ _ 25 repeats repeat NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 that that SCONJ IN _ _ _ _ _ 29 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 30 required require VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 core core NOUN NN Number=Sing _ _ _ _ 33 sequence sequence NOUN NN Number=Sing _ _ _ _ 34 AGGC Aggc NOUN NN Number=Sing _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 specific specific ADJ JJ Degree=Pos _ _ _ _ 37 binding binding NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 7147 # text = Binding of AP-2 prevented the subsequent binding of members of the CREB/ATF family to an adjacent regulatory motif in the 21 bp repeat. 1 Binding binding NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 9 binding binding NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 members member NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 ATF ATF PROPN NNP Number=Sing _ _ _ _ 17 family family NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 21 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 22 motif motif NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 21 21 NUM CD NumType=Card _ _ _ _ 26 bp bp NOUN NN Number=Sing _ _ _ _ 27 repeat repeat VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 7148 # text = Transfection of an AP-2 expression construct into T-lymphocytes activated gene expression from the HTLV-I LTR. 1 Transfection Transfection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 construct construct NOUN NN Number=Sing _ _ _ _ 9 into into ADP IN _ _ _ _ _ 10 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 12 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 gene gene ADJ JJ Degree=Pos _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 HTLV HTLV NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 20 LTR LTR VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 7149 # text = At least two 21 bp repeats were required for high levels of AP-2 activation and mutagenesis of the AP-2 consensus binding sequences in the 21 bp repeats eliminate this activation. 1 At at ADV RB _ _ _ _ _ 2 least least ADV RBS Degree=Sup _ _ _ _ 3 two two NUM CD NumType=Card _ _ _ _ 4 21 21 NUM CD NumType=Card _ _ _ _ 5 bp bp NOUN NN Number=Sing _ _ _ _ 6 repeats repeat NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 high high ADJ JJ Degree=Pos _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ _ 24 consensus consensus NOUN NN Number=Sing _ _ _ _ 25 binding bind VERB VBG VerbForm=Ger _ _ _ _ 26 sequences sequence NOUN NNS Number=Plur _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 21 21 NUM CD NumType=Card _ _ _ _ 30 bp bp NOUN NN Number=Sing _ _ _ _ 31 repeats repeat NOUN NNS Number=Plur _ _ _ _ 32 eliminate eliminate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 34 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 7150 # text = (ABSTRACT TRUNCATED AT 250 WORDS) 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 ABSTRACT ABSTRACT X GW _ _ _ _ _ 3 TRUNCATED Truncate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 AT at ADV RB _ _ _ _ _ 5 250 250 NUM CD NumType=Card _ _ _ _ 6 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7151 # text = Document 0030011018 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011018 0030011018 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7152 # text = Two distinct transcription factors that bind the immunoglobulin enhancer microE5/kappa 2 motif. 1 Two two NUM CD NumType=Card _ _ _ _ 2 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factors factor NOUN NNS Number=Plur _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 9 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 10 microE5 microe5 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 2 2 NUM CD NumType=Card _ _ _ _ 14 motif. motif. NOUN NN Number=Sing _ _ _ SpacesAfter=\s\n # sent_id = 7153 # text = Activity of the immunoglobulin heavy and kappa light chain gene enhancers depends on a complex interplay of ubiquitous and developmentally regulated proteins. 1 Activity activity NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 5 heavy heavy NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 light light NOUN NN Number=Sing _ _ _ _ 9 chain chain NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 enhancers enhancer NOUN NNS Number=Plur _ _ _ _ 12 depends depend VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 complex complex ADJ JJ Degree=Pos _ _ _ _ 16 interplay interplay NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 developmentally developmentally ADV RB _ _ _ _ _ 21 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 7154 # text = Two complementary DNAs were isolated that encode proteins, denoted ITF-1 and ITF-2, that are expressed in a variety of cell types and bind the microE5/kappa 2 motif found in both heavy and kappa light chain enhancers. 1 Two two NUM CD NumType=Card _ _ _ _ 2 complementary complementary ADJ JJ Degree=Pos _ _ _ _ 3 DNAs Dna NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 isolated isolate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 encode encode NOUN NN Number=Sing _ _ _ _ 8 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 denoted denote VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 ITF ITF NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 ITF Itf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 variety variety NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 types type NOUN NNS Number=Plur _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 microE5 microe5 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappa kappa NOUN NN Number=Sing _ _ _ _ 34 2 2 NUM CD NumType=Card _ _ _ _ 35 motif motif NOUN NN Number=Sing _ _ _ _ 36 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 both both DET DT _ _ _ _ _ 39 heavy heavy ADJ JJ Degree=Pos _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 kappa kappa NOUN NN Number=Sing _ _ _ _ 42 light light NOUN NN Number=Sing _ _ _ _ 43 chain chain NOUN NN Number=Sing _ _ _ _ 44 enhancers enhancer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 7155 # text = The complementary DNAs are the products of distinct genes, yet both ITF-1 and ITF-2 are structurally and functionally similar. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 complementary complementary ADJ JJ Degree=Pos _ _ _ _ 3 DNAs Dna NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 products product NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 9 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 yet yet CCONJ CC _ _ _ _ _ 12 both both DET DT _ _ _ _ _ 13 ITF Itf NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 ITF Itf NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 structurally structurally ADV RB _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 functionally functionally ADV RB _ _ _ _ _ 24 similar similar ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 7156 # text = The two proteins interact with one another through their putative helix-loop-helix motifs and each possesses a distinct domain that dictates transcription activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 proteins protein NOUN NNS Number=Plur _ _ _ _ 4 interact interact VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 one one NUM CD NumType=Card _ _ _ _ 7 another another DET DT _ _ _ _ _ 8 through through ADP IN _ _ _ _ _ 9 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 10 putative putative ADJ JJ Degree=Pos _ _ _ _ 11 helix helix NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 -loop -loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 helix helix NOUN NN Number=Sing _ _ _ _ 15 motifs motif NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 each each DET DT _ _ _ _ _ 18 possesses possess NOUN NNS Number=Plur _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 21 domain domain NOUN NN Number=Sing _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 dictates dictate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7157 # text = Document 0030011024 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011024 0030011024 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7158 # text = Interaction of sickle erythrocytes with endothelial cells in the presence of endothelial cell conditioned medium induces oxidant stress leading to transendothelial migration of monocytes. 1 Interaction interaction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 sickle sickle ADJ JJ Degree=Pos _ _ _ _ 4 erythrocytes erythrocyte NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 presence presence NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 conditioned condition VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 medium medium ADJ JJ Degree=Pos _ _ _ _ 16 induces induces NOUN NNS Number=Plur _ _ _ _ 17 oxidant oxidant ADJ JJ Degree=Pos _ _ _ _ 18 stress stress NOUN NN Number=Sing _ _ _ _ 19 leading lead VERB VBG VerbForm=Ger _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 transendothelial transendothelial VERB VB VerbForm=Inf _ _ _ _ 22 migration migration NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7159 # text = The abnormal adherence of sickle red blood cells (SS RBC) to endothelial cells has been thought to contribute to vascular occlusion, a major cause of morbidity in sickle cell disease (SCD). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 abnormal abnormal ADJ JJ Degree=Pos _ _ _ _ 3 adherence adherence NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 sickle sickle ADJ JJ Degree=Pos _ _ _ _ 6 red red ADJ JJ Degree=Pos _ _ _ _ 7 blood blood NOUN NN Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 SS SS PROPN NNP Number=Sing _ _ _ _ 11 RBC RBC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 18 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 23 occlusion occlusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 major major ADJ JJ Degree=Pos _ _ _ _ 27 cause cause NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 morbidity morbidity NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 sickle sickle ADJ JJ Degree=Pos _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 disease disease NOUN NN Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 SCD Scd NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 7160 # text = We determined whether the interaction of SS RBC with cultured endothelial cells induced cellular oxidant stress that would culminate in expression of cell adhesion molecules (CAMs) involved in the adhesion and diapedesis of monocytes and the adherence of SS reticulocytes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 determined determine VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 interaction interaction NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 SS Ss PROPN NNP Number=Sing _ _ _ _ 8 RBC RBC PROPN NNP Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 cultured culture VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 cellular celular ADJ JJ Degree=Pos _ _ _ _ 15 oxidant oxidant ADJ JJ Degree=Pos _ _ _ _ 16 stress stress NOUN NN Number=Sing _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 would would AUX MD VerbForm=Fin _ _ _ _ 19 culminate culminate VERB VB VerbForm=Inf _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 25 molecules molecule NOUN NNS Number=Plur _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 CAMs CAM NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 involved involved ADJ JJ Degree=Pos _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 diapedesis diapedesis NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 adherence adherence NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 SS ss NOUN NN Number=Sing _ _ _ _ 42 reticulocytes reticulocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 7161 # text = We showed that the interaction of SS RBC at 2% concentration in the presence of multimers of von Willebrand factor (vWf), derived from endothelial cell-derived conditioned medium (E-CM) with cultured human umbilical vein endothelial cells (HUVEC), resulted in a fivefold increased formation of thiobarbituric acid-reactive substances (TBARS) and activation of the transcription factor NF-kB, both indicators of cellular oxidant stress. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 interaction interaction NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 SS SS PROPN NNP Number=Sing _ _ _ _ 8 RBC RBC PROPN NNP Number=Sing _ _ _ _ 9 at at ADP IN _ _ _ _ _ 10 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 % % SYM NN Number=Sing _ _ _ _ 12 concentration concentration NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 presence presence NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 multimers multimer NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 von von PROPN NNP Number=Sing _ _ _ _ 20 Willebrand Willebrand PROPN NNP Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 vWf vWf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 derived derive VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 conditioned condition ADJ JJ Degree=Pos _ _ _ _ 33 medium medium NOUN NN Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 E e NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 CM cm NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 with with ADP IN _ _ _ _ _ 40 cultured cultured ADJ JJ Degree=Pos _ _ _ _ 41 human human ADJ JJ Degree=Pos _ _ _ _ 42 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 43 vein vein NOUN NN Number=Sing _ _ _ _ 44 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 45 cells cell NOUN NNS Number=Plur _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 HUVEC HUVEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 51 in in ADP IN _ _ _ _ _ 52 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 53 fivefold fivefold NOUN NN Number=Sing _ _ _ _ 54 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 55 formation formation NOUN NN Number=Sing _ _ _ _ 56 of of ADP IN _ _ _ _ _ 57 thiobarbituric thiobarbituric ADJ JJ Degree=Pos _ _ _ _ 58 acid acid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 59 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 60 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 61 substances substance NOUN NNS Number=Plur _ _ _ _ 62 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 63 TBARS Tbar NOUN NNS Number=Plur _ _ _ SpaceAfter=No 64 ) ) PUNCT -RRB- _ _ _ _ _ 65 and and CCONJ CC _ _ _ _ _ 66 activation activation NOUN NN Number=Sing _ _ _ _ 67 of of ADP IN _ _ _ _ _ 68 the the DET DT Definite=Def|PronType=Art _ _ _ _ 69 transcription transcription NOUN NN Number=Sing _ _ _ _ 70 factor factor NOUN NN Number=Sing _ _ _ _ 71 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 72 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 73 kB kb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 74 , , PUNCT , _ _ _ _ _ 75 both both CCONJ CC _ _ _ _ _ 76 indicators indicator NOUN NNS Number=Plur _ _ _ _ 77 of of ADP IN _ _ _ _ _ 78 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 79 oxidant oxidant ADJ JJ Degree=Pos _ _ _ _ 80 stress stress NOUN NN Number=Sing _ _ _ SpaceAfter=No 81 . . PUNCT . _ _ _ _ _ # sent_id = 7162 # text = Normal RBC show none of these phenomena. 1 Normal normal PROPN NNP Number=Sing _ _ _ _ 2 RBC RBC PROPN NNP Number=Sing _ _ _ _ 3 show show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 none none NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 phenomena phenomena NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 7163 # text = The oxidant stress-induced signaling resulted in an increased surface expression of a subset of CAMs, ICAM-1, E-selectin, and VCAM-1 in HUVEC. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 oxidant oxidant ADJ JJ Degree=Pos _ _ _ _ 3 stress stress NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 -induced -induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 signaling signaling NOUN NN Number=Sing _ _ _ _ 6 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 surface surface NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 subset subset NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 CAMs CAM NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 E-selectin E-selectin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 HUVEC HUVEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 7164 # text = The addition of oxygen radical scavenger enzymes (catalase, superoxide dismutase) and antioxidant (probucol) inhibited these events. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 oxygen oxygen ADJ JJ Degree=Pos _ _ _ _ 5 radical radical ADJ JJ Degree=Pos _ _ _ _ 6 scavenger scavenger NOUN NN Number=Sing _ _ _ _ 7 enzymes enzyme NOUN NNS Number=Plur _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 catalase catalase NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 superoxide superoxide ADJ JJ Degree=Pos _ _ _ _ 12 dismutase dismutase NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 antioxidant antioxidant ADJ JJ Degree=Pos _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 probucol probucol NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 21 events event NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 7165 # text = Additionally, preincubation of HUVEC with a synthetic peptide Arg-Gly-Asp (RGD) that prevents vWf-mediated adhesion of SS RBC reduced the surface expression of VCAM-1 and NF-kB activation. 1 Additionally additionally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 preincubation preincubation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 HUVEC HUVEC PROPN NNP Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 9 peptide peptide NOUN NN Number=Sing _ _ _ _ 10 Arg- Arg- PUNCT : _ _ _ _ SpaceAfter=No 11 Gly Gly PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 Asp Asp PROPN NNP Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 RGD RGD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 prevents prevent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 vWf vWf NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 SS SS PROPN NNP Number=Sing _ _ _ _ 25 RBC RBC PROPN NNP Number=Sing _ _ _ _ 26 reduced reduce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 surface surface NOUN NN Number=Sing _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 kB kb NOUN NN Number=Sing _ _ _ _ 38 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 7166 # text = Furthermore, SS RBC-induced oxidant stress resulted in a twofold increase in the transendothelial migration of both monocyte-like HL-60 cells and human peripheral blood monocytes, and approximately a sixfold increase in platelet-endothelial cell adhesion molecule-1 (PECAM-1) phosphorylation, each of which was blocked by protein kinase C inhibitor and antioxidants. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 SS Ss PROPN NNP Number=Sing _ _ _ _ 4 RBC RBC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 oxidant oxidant ADJ JJ Degree=Pos _ _ _ _ 8 stress stress NOUN NN Number=Sing _ _ _ _ 9 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 twofold twofold NOUN NN Number=Sing _ _ _ _ 13 increase increase NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 transendothelial transendothelial ADJ JJ Degree=Pos _ _ _ _ 17 migration migration NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 both both DET DT _ _ _ _ _ 20 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 like like ADJ JJ Degree=Pos _ _ _ _ 23 HL HL NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 60 60 NUM CD NumType=Card _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 30 blood blood NOUN NN Number=Sing _ _ _ _ 31 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 approximately approximately ADV RB _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 sixfold sixfold ADJ JJ Degree=Pos _ _ _ _ 37 increase increase NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT , _ _ _ _ SpaceAfter=No 41 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 42 cell cell NOUN NN Number=Sing _ _ _ _ 43 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 44 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 -1 -1 NUM CD NumType=Card _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 PECAM PECAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ _ 51 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 each each DET DT _ _ _ _ _ 54 of of ADP IN _ _ _ _ _ 55 which which PRON WDT PronType=Rel _ _ _ _ 56 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 57 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 58 by by ADP IN _ _ _ _ _ 59 protein protein NOUN NN Number=Sing _ _ _ _ 60 kinase kinase NOUN NN Number=Sing _ _ _ _ 61 C c NOUN NN Number=Sing _ _ _ _ 62 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 63 and and CCONJ CC _ _ _ _ _ 64 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 65 . . PUNCT . _ _ _ _ _ # sent_id = 7167 # text = These results suggest that the adherence/contact of SS RBC to endothelial cells in large vessel can generate enhanced oxidant stress leading to increased adhesion and diapedesis of monocytes, as well as heightened adherence of SS reticulocytes, indicating that injury/activation of endothelium can contribute to vaso-occlusion in SCD. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 adherence adherence NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 contact contact NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 SS SS PROPN NNP Number=Sing _ _ _ _ 11 RBC RBC PROPN NNP Number=Sing _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 large large ADJ JJ Degree=Pos _ _ _ _ 17 vessel vessel NOUN NN Number=Sing _ _ _ _ 18 can can AUX MD VerbForm=Fin _ _ _ _ 19 generate generate VERB VB VerbForm=Inf _ _ _ _ 20 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 oxidant oxidant ADJ JJ Degree=Pos _ _ _ _ 22 stress stress NOUN NN Number=Sing _ _ _ _ 23 leading lead VERB VBG VerbForm=Ger _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 diapedesis diapedesis NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 as as ADV RB _ _ _ _ _ 33 well well ADV RB Degree=Pos _ _ _ _ 34 as as ADP IN _ _ _ _ _ 35 heightened heighten VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 adherence adherence NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 SS ss NOUN NN Number=Sing _ _ _ _ 39 reticulocytes reticulocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 42 that that SCONJ IN _ _ _ _ _ 43 injury injury NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 /activation /activation NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 endothelium endothelium NOUN NN Number=Sing _ _ _ _ 47 can can AUX MD VerbForm=Fin _ _ _ _ 48 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 49 to to PART TO _ _ _ _ _ 50 vaso vaso VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 51 -occlusion -occlusion NOUN NN Number=Sing _ _ _ _ 52 in in ADP IN _ _ _ _ _ 53 SCD SCD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7168 # text = Document 0030011026 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011026 0030011026 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7169 # text = Two distinct signalling pathways are involved in the control of the biphasic junB transcription induced by interleukin-6 in the B cell hybridoma 7TD1. 1 Two two NUM CD NumType=Card _ _ _ _ 2 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 3 signalling signalling NOUN NN Number=Sing _ _ _ _ 4 pathways pathway NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 involved involved ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 control control NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 biphasic biphasic ADJ JJ Degree=Pos _ _ _ _ 13 junB junb NOUN NN Number=Sing _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 6 6 NUM CD NumType=Card _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 B b PROPN NNP Number=Sing _ _ _ _ 23 cell cell PROPN NNP Number=Sing _ _ _ _ 24 hybridoma hybridoma PROPN NNP Number=Sing _ _ _ _ 25 7TD1 7td1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7170 # text = We have measured the level of junB mRNA in the B hybridoma cell line 7TD1, under interleukin-6 (IL-6) stimulation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 measured measure VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 level level NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 junB junB PROPN NNP Number=Sing _ _ _ _ 8 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 B b ADJ JJ Degree=Pos _ _ _ _ 12 hybridoma hybridoma NOUN NN Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 line line NOUN NN Number=Sing _ _ _ _ 15 7TD1 7td1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 under under ADP IN _ _ _ _ _ 18 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 6 6 NUM CD NumType=Card _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 7171 # text = IL-6 increases junB mRNA in a biphasic fashion. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 6 6 NUM CD NumType=Card _ _ _ _ 4 increases increase NOUN NNS Number=Plur _ _ _ _ 5 junB junB PROPN NNP Number=Sing _ _ _ _ 6 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 biphasic biphasic ADJ JJ Degree=Pos _ _ _ _ 10 fashion fashion NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 7172 # text = The first early-induced peak was transient and likely corresponds to the well documented typical junB mRNA, stimulated in response to numerous growth factors, including IL-6. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 early early ADV RB Degree=Pos _ _ _ SpaceAfter=No 4 -induced -induced VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 peak peak NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 transient transient ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 likely likely ADJ JJ Degree=Pos _ _ _ _ 10 corresponds corresponds NOUN NNS Number=Plur _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 well well ADV RB Degree=Pos _ _ _ _ 14 documented document VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 typical typical ADJ JJ Degree=Pos _ _ _ _ 16 junB junb PROPN NNP Number=Sing _ _ _ _ 17 mRNA mRNa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 response response NOUN NN Number=Sing _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 numerous numerous ADJ JJ Degree=Pos _ _ _ _ 24 growth growth NOUN NN Number=Sing _ _ _ _ 25 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 including include VERB VBG VerbForm=Ger _ _ _ _ 28 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - SYM SYM _ _ _ _ SpaceAfter=No 30 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 7173 # text = At variance, the second peak which has never been reported previously, lasted several hours. 1 At at ADP IN _ _ _ _ _ 2 variance variance NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 6 peak peak NOUN NN Number=Sing _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 never never ADV RB _ _ _ _ _ 10 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 11 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 previously previously ADV RB _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 lasted last VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 several several ADJ JJ Degree=Pos _ _ _ _ 16 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 7174 # text = As a consequence of its effect on junB mRNA, IL-6 stimulated, in a biphasic fashion, the nuclear accumulation of the JunB protein. 1 As as ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 consequence consequence NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 6 effect effect NOUN NN Number=Sing _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 junB junB PROPN NNP Number=Sing _ _ _ _ 9 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 6 6 NUM CD NumType=Card _ _ _ _ 14 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 biphasic biphasic ADJ JJ Degree=Pos _ _ _ _ 19 fashion fashion NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 23 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 JunB JunB PROPN NNP Number=Sing _ _ _ _ 27 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 7175 # text = In this study, we demonstrated that IL-6 regulation occurred exclusively at the transcriptional level and that the bimodal increase of junB mRNA and JunB protein can be accounted for by a biphasic stimulation of junB transcription. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 6 6 NUM CD NumType=Card _ _ _ _ 11 regulation regulation NOUN NN Number=Sing _ _ _ _ 12 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 exclusively exclusively ADV RB _ _ _ _ _ 14 at at ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 17 level level NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 bimodal bimodal ADJ JJ Degree=Pos _ _ _ _ 22 increase increase NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 junB junB PROPN NNP Number=Sing _ _ _ _ 25 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 JunB JunB PROPN NNP Number=Sing _ _ _ _ 28 protein protein NOUN NN Number=Sing _ _ _ _ 29 can can AUX MD VerbForm=Fin _ _ _ _ 30 be be AUX VB VerbForm=Inf _ _ _ _ 31 accounted account VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 biphasic biphasic ADJ JJ Degree=Pos _ _ _ _ 36 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 junB junb NOUN NN Number=Sing _ _ _ _ 39 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 7176 # text = Furthermore, our data point to two major differences between the mechanism of control of the early and the late IL-6-induced junB transcription waves. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 data data NOUN NN Number=Sing _ _ _ _ 5 point point NOUN NN Number=Sing _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 major major ADJ JJ Degree=Pos _ _ _ _ 9 differences difference NOUN NNS Number=Plur _ _ _ _ 10 between between ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 control control NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 early early ADJ JJ Degree=Pos _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 late late ADJ JJ Degree=Pos _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 junB junb NOUN NN Number=Sing _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 waves wafe NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 7177 # text = First, cycloheximide strongly potentiated the transcription of the second wave, whereas it failed to affect the early-induced burst. 1 First first ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 cycloheximide cycloheximide VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 strongly strongly ADV RB _ _ _ _ _ 5 potentiated potentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 11 wave wave NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 whereas whereas SCONJ IN _ _ _ _ _ 14 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 15 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 affect affect VERB VB VerbForm=Inf _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 early early ADV RB Degree=Pos _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 burst burst NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 7178 # text = Second, tyrphostin, a tyrosine kinase inhibitor, impaired the expression of the first but not the second junB mRNA peak. 1 Second second ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 tyrphostin tyrphostin NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 impaired impaire VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 not not PART RB _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 20 junB junb NOUN NN Number=Sing _ _ _ _ 21 mRNA mRNa ADP IN _ _ _ _ _ 22 peak peak NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 7179 # text = Conversely, genistein, another tyrosine kinase inhibitor, totally abolished the expression of the second peak of junB mRNA whereas it did not affect the expression of the first peak. 1 Conversely Conversely ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 genistein genistein NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 another another DET DT _ _ _ _ _ 6 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 totally totally ADV RB _ _ _ _ _ 11 abolished abolish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 17 peak peak NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 junB junB PROPN NNP Number=Sing _ _ _ _ 20 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 21 whereas whereas SCONJ IN _ _ _ _ _ 22 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 23 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 not not PART RB _ _ _ _ _ 25 affect affect VERB VB VerbForm=Inf _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 31 peak peak NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 7180 # text = Altogether these data indicate that, in 7TD1 cells, IL-6 controls junB transcription in a biphasic fashion by means of two separate transduction pathways. 1 Altogether altogether ADV RB _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 data data NOUN NN Number=Sing _ _ _ _ 4 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 7TD1 7TD1 NUM CD NumType=Card _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 6 6 NUM CD NumType=Card _ _ _ _ 14 controls control NOUN NN Number=Sing _ _ _ _ 15 junB junb NOUN NN Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 biphasic biphasic ADJ JJ Degree=Pos _ _ _ _ 20 fashion fashion NOUN NN Number=Sing _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 means means NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 two two NUM CD NumType=Card _ _ _ _ 25 separate separate ADJ JJ Degree=Pos _ _ _ _ 26 transduction transduction NOUN NN Number=Sing _ _ _ _ 27 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7181 # text = Document 0030011027 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011027 0030011027 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7182 # text = IFN-gamma priming of monocytes enhances LPS-induced TNF production by augmenting both transcription and MRNA stability. 1 IFN Ifn ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 gamma gamma NOUN NN Number=Sing _ _ _ _ 4 priming priming NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 7 enhances enhance NOUN NNS Number=Plur _ _ _ _ 8 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 TNF Tnf PROPN NNP Number=Sing _ _ _ _ 12 production production NOUN NN Number=Sing _ _ _ _ 13 by by SCONJ IN _ _ _ _ _ 14 augmenting augment VERB VBG VerbForm=Ger _ _ _ _ 15 both both DET DT _ _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 MRNA MRNa DET DT Definite=Ind|PronType=Art _ _ _ _ 19 stability stability NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7183 # text = The induction of cytokine expression in monocytes/macrophages by bacterial endotoxin or lipopolysaccharide is a critical, highly regulated host defence response. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 12 endotoxin endotoxin NOUN NN Number=Sing _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 critical critical ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 highly highly ADV RB _ _ _ _ _ 20 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 host host NOUN NN Number=Sing _ _ _ _ 22 defence defence NOUN NN Number=Sing _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 7184 # text = The augmentation of LPS responses by interferon gamma (IFN-gamma), referred to as priming, is well established. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 augmentation augmentation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 LPS LPS ADJ JJ Degree=Pos _ _ _ _ 5 responses response NOUN NNS Number=Plur _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 interferon interferon ADJ JJ Degree=Pos _ _ _ _ 8 gamma gamma NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 referred refer VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 as as SCONJ IN _ _ _ _ _ 18 priming priming VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 well well ADV RB Degree=Pos _ _ _ _ 22 established establish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 7185 # text = However, the mechanism(s) by which priming occurs is poorly defined. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 s s X AFX _ _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 which which PRON WDT PronType=Rel _ _ _ _ 10 priming priming ADJ JJ Degree=Pos _ _ _ _ 11 occurs occur NOUN NNS Number=Plur _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 poorly poorly ADV RB _ _ _ _ _ 14 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 7186 # text = Using tumour necrosis factor (TNF) induction as a model, experiments were designed to analyse in detail the priming effect on the LPS response in human monocytes. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 tumour tumour PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 3 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 induction induction NOUN NN Number=Sing _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 model model NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 experiments experiment NOUN NNS Number=Plur _ _ _ _ 14 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 designed design VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 analyse analyse VERB VB VerbForm=Inf _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 detail detail NOUN NN Number=Sing _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 priming priming VERB VBG VerbForm=Ger _ _ _ _ 22 effect effect NOUN NN Number=Sing _ _ _ _ 23 on on ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 LPS Lps PROPN NNP Number=Sing _ _ _ _ 26 response response NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 7187 # text = Priming by IFN-gamma was primarily manifested at the level of TNF mRNA accumulation. 1 Priming Prime VERB VBG VerbForm=Ger _ _ _ _ 2 by by ADP IN _ _ _ _ _ 3 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 gamma gamma NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 primarily primarily ADV RB _ _ _ _ _ 8 manifested manifest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 at at ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 level level NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 TNF TNF PROPN NNP Number=Sing _ _ _ _ 14 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 15 accumulation accumulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 7188 # text = IFN-gamma pre-treatment affected the magnitude rather than the sensitivity of the LPS response. 1 IFN- IFN- SYM NFP _ _ _ _ SpaceAfter=No 2 gamma gamma NOUN NN Number=Sing _ _ _ _ 3 pre-treatment pre-treatment NOUN NN Number=Sing _ _ _ _ 4 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 magnitude magnitude NOUN NN Number=Sing _ _ _ _ 7 rather rather ADV RB _ _ _ _ _ 8 than than ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 LPS LPS PROPN NNP Number=Sing _ _ _ _ 14 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 7189 # text = Priming occurred after several hours of treatment, and the primed state was induced by either IFN-gamma or GM-CSF, but not M-CSF. 1 Priming Prime PROPN NNP Number=Sing _ _ _ _ 2 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 after after ADP IN _ _ _ _ _ 4 several several ADJ JJ Degree=Pos _ _ _ _ 5 hours hour NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 primed prim ADJ JJ Degree=Pos _ _ _ _ 12 state state NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 either either CCONJ CC _ _ _ _ _ 17 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 gamma gamma NOUN NN Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 but but CCONJ CC _ _ _ _ _ 26 not not ADV RB _ _ _ _ _ 27 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 7190 # text = Primed monocytes transcribed TNF mRNA at a higher rate than freshly isolated monocytes upon activation with LPS. 1 Primed Prim VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 3 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 TNF TNF PROPN NNP Number=Sing _ _ _ _ 5 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 6 at at ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 higher higher ADJ JJR Degree=Cmp _ _ _ _ 9 rate rate NOUN NN Number=Sing _ _ _ _ 10 than than SCONJ IN _ _ _ _ _ 11 freshly freshly ADV RB _ _ _ _ _ 12 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 14 upon upon ADP IN _ _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 7191 # text = The increased transcriptional rate correlated with a marked increase in nuclear factor-kappa B activity in these cells as determined by electrophoretic mobility shift assay using a consensus NF-kappa B oligonucleotide. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 4 rate rate NOUN NN Number=Sing _ _ _ _ 5 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 increase increase NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 as as SCONJ IN _ _ _ _ _ 21 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 24 mobility mobility NOUN NN Number=Sing _ _ _ _ 25 shift shift NOUN NN Number=Sing _ _ _ _ 26 assay assay NOUN NN Number=Sing _ _ _ _ 27 using use VERB VBG VerbForm=Ger _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 consensus consensus NOUN NN Number=Sing _ _ _ _ 30 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappa kappa NOUN NN Number=Sing _ _ _ _ 33 B b NOUN NN Number=Sing _ _ _ _ 34 oligonucleotide oligonucleotide NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 7192 # text = An additional significant finding was than TNF mRNA induced in primed cells was much more stable than in unprimed cells (T1/2 increased 6-8-fold). 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 additional additional ADJ JJ Degree=Pos _ _ _ _ 3 significant significant ADJ JJ Degree=Pos _ _ _ _ 4 finding finding NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 than than ADP IN _ _ _ _ _ 7 TNF Tnf PROPN NNP Number=Sing _ _ _ _ 8 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 9 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 primed prim ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 much much ADV RB _ _ _ _ _ 15 more more ADV RBR _ _ _ _ _ 16 stable stable ADJ JJ Degree=Pos _ _ _ _ 17 than than ADP IN _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 unprimed unprim ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 T1 t1 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 / / SYM SYM _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - SYM SYM _ _ _ _ SpaceAfter=No 28 8 8 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 7193 # text = Consistent with the increased mRNA stability, the duration of mRNA accumulation was longer following LPS stimulation in primed monocytes, in addition to being of greater magnitude. 1 Consistent consistent ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 6 stability stability NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 duration duration NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 12 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 longer longer ADV RBR Degree=Cmp _ _ _ _ 15 following follow VERB VBG VerbForm=Ger _ _ _ _ 16 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 17 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 primed prim ADJ JJ Degree=Pos _ _ _ _ 20 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 addition addition NOUN NN Number=Sing _ _ _ _ 24 to to SCONJ IN _ _ _ _ _ 25 being be AUX VBG VerbForm=Ger _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 greater greater ADJ JJR Degree=Cmp _ _ _ _ 28 magnitude magnitude NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 7194 # text = Finally, primed and unprimed cells possessed a differential sensitivity to the kinase inhibitor H-89. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 primed prim ADJ JJ Degree=Pos _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 unprimed unprim ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 possessed possess VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 differential differential ADJ JJ Degree=Pos _ _ _ _ 10 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 kinase kinase NOUN NN Number=Sing _ _ _ _ 14 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 15 H h NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 89 89 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 7195 # text = H-89 substantially suppressed LPS-induced TNF mRNA accumulation in unprimed cells, but had no effect on primed monocytes following LPS stimulation. 1 H h INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 89 89 NUM CD NumType=Card _ _ _ _ 4 substantially substantially ADV RB _ _ _ _ _ 5 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 TNF TNF PROPN NNP Number=Sing _ _ _ _ 10 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 11 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 unprimed unprim ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 no no DET DT _ _ _ _ _ 19 effect effect NOUN NN Number=Sing _ _ _ _ 20 on on ADP IN _ _ _ _ _ 21 primed prim ADJ JJ Degree=Pos _ _ _ _ 22 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 23 following follow VERB VBG VerbForm=Ger _ _ _ _ 24 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 25 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 7196 # text = (ABSTRACT TRUNCATED AT 250 WORDS) 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 ABSTRACT ABSTRACT X GW _ _ _ _ _ 3 TRUNCATED Truncate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 AT at ADV RB _ _ _ _ _ 5 250 250 NUM CD NumType=Card _ _ _ _ 6 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7197 # text = Document 0030011029 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011029 0030011029 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7198 # text = Platelet-activating factor (PAF) positively auto-regulates the expression of human PAF receptor transcript 1 (leukocyte-type) through NF-kappa B. 1 Platelet Platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 activating activating NOUN NN Number=Sing _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 PAF PAF NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 positively positively ADV RB _ _ _ _ _ 9 auto auto ADV RB _ _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 PAF PAF NOUN NN Number=Sing _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 transcript transcript NOUN NN Number=Sing _ _ _ _ 19 1 1 NUM CD NumType=Card _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 leukocyte leukocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 through through ADP IN _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa PROPN NNP Number=Sing _ _ _ _ 29 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7199 # text = The human platelet-activating factor receptor (PAFR) gene is transcribed by two distinct promoters (promoter 1 and promoter 2) to generate two transcripts (designated as PAFR transcript 1 and PAFR transcript 2), though their open reading frames are identical. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 activating activate VERB VBG VerbForm=Ger _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 PAFR PAFR NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 two two NUM CD NumType=Card _ _ _ _ 16 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 17 promoters promoter NOUN NNS Number=Plur _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 1 1 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ _ 23 2 2 X LS _ _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 generate generate VERB VB VerbForm=Inf _ _ _ _ 27 two two NUM CD NumType=Card _ _ _ _ 28 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 as as ADP IN _ _ _ _ _ 32 PAFR Pafr PROPN NNP Number=Sing _ _ _ _ 33 transcript transcript VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 1 1 NUM CD NumType=Card _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 PAFR Pafr NOUN NN Number=Sing _ _ _ _ 37 transcript transcript NOUN NN Number=Sing _ _ _ _ 38 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 though though ADV RB _ _ _ _ _ 42 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 43 open open ADJ JJ Degree=Pos _ _ _ _ 44 reading reading NOUN NN Number=Sing _ _ _ _ 45 frames frame NOUN NNS Number=Plur _ _ _ _ 46 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 47 identical identical ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 7200 # text = By primer extension analysis to discriminate two transcripts, we found that the levels of PAFR transcript 1 (leukocyte-type), but not PAFR transcript 2 (tissue-type), are upregulated by PAF as well as by 12-O-tetradecanoylphorbol-13-acetate (TPA) in the human stomach cancer cell line (JR-St cells) which expresses both functional PAFR transcript 1 and PAFR transcript 2 endogenously. 1 By by ADP IN _ _ _ _ _ 2 primer primer ADJ JJ Degree=Pos _ _ _ _ 3 extension extension NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 discriminate discriminate VERB VB VerbForm=Inf _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 transcripts transcript NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 levels level NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 PAFR PAFR NOUN NN Number=Sing _ _ _ _ 17 transcript transcript NOUN NN Number=Sing _ _ _ _ 18 1 1 NUM CD NumType=Card _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 leukocyte leukocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 but but CCONJ CC _ _ _ _ _ 26 not not ADV RB _ _ _ _ _ 27 PAFR Pafr ADV RBR Degree=Cmp _ _ _ _ 28 transcript transcript VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 2 2 NUM CD NumType=Card _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 37 upregulated upregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 by by ADP IN _ _ _ _ _ 39 PAF PAF PROPN NNP Number=Sing _ _ _ _ 40 as as ADV RB _ _ _ _ _ 41 well well ADV RB Degree=Pos _ _ _ _ 42 as as ADP IN _ _ _ _ _ 43 by by ADP IN _ _ _ _ _ 44 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 - - PUNCT , _ _ _ _ SpaceAfter=No 46 O o INTJ UH _ _ _ _ SpaceAfter=No 47 -tetradecanoylphorbol -tetradecanoylphorbol INTJ UH _ _ _ _ SpaceAfter=No 48 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 49 -acetate -acetate ADJ JJ Degree=Pos _ _ _ _ 50 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 51 TPA TPA X LS _ _ _ _ SpaceAfter=No 52 ) ) PUNCT -RRB- _ _ _ _ _ 53 in in ADP IN _ _ _ _ _ 54 the the DET DT Definite=Def|PronType=Art _ _ _ _ 55 human human ADJ JJ Degree=Pos _ _ _ _ 56 stomach stomach NOUN NN Number=Sing _ _ _ _ 57 cancer cancer NOUN NN Number=Sing _ _ _ _ 58 cell cell NOUN NN Number=Sing _ _ _ _ 59 line line NOUN NN Number=Sing _ _ _ _ 60 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 61 JR JR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 62 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 63 St St PROPN NNP Number=Sing _ _ _ _ 64 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 65 ) ) PUNCT -RRB- _ _ _ _ _ 66 which which PRON WDT PronType=Rel _ _ _ _ 67 expresses expresse VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 68 both both DET DT _ _ _ _ _ 69 functional functional ADJ JJ Degree=Pos _ _ _ _ 70 PAFR Pafr NOUN NN Number=Sing _ _ _ _ 71 transcript transcript NOUN NN Number=Sing _ _ _ _ 72 1 1 NUM CD NumType=Card _ _ _ _ 73 and and CCONJ CC _ _ _ _ _ 74 PAFR Pafr NOUN NN Number=Sing _ _ _ _ 75 transcript transcript NOUN NN Number=Sing _ _ _ _ 76 2 2 NUM CD NumType=Card _ _ _ _ 77 endogenously endogenously ADV RB _ _ _ _ SpaceAfter=No 78 . . PUNCT . _ _ _ _ _ # sent_id = 7201 # text = Functional analysis of the promoter 1 with a transient expression assay using chloramphenicol acetyltransferase (CAT) gene as a reporter showed that both PAF and TPA activated the promoter 1 but not the deleted promoter lacking the three consensus binding sites for NF-kappa B located from -571 bp to -459 bp. 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ _ 6 1 1 NUM CD NumType=Card _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 transient transient ADJ JJ Degree=Pos _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 assay assay NOUN NN Number=Sing _ _ _ _ 12 using use VERB VBG VerbForm=Ger _ _ _ _ 13 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 14 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 CAT cat NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 as as ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 reporter reporter NOUN NN Number=Sing _ _ _ _ 22 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 both both CCONJ CC _ _ _ _ _ 25 PAF PAF PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 TPA TPA PROPN NNP Number=Sing _ _ _ _ 28 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 promoter promoter NOUN NN Number=Sing _ _ _ _ 31 1 1 NUM CD NumType=Card _ _ _ _ 32 but but CCONJ CC _ _ _ _ _ 33 not not PART RB _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 deleted delet VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 promoter promoter NOUN NN Number=Sing _ _ _ _ 37 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 three three NUM CD NumType=Card _ _ _ _ 40 consensus consensus NOUN NN Number=Sing _ _ _ _ 41 binding bind VERB VBG VerbForm=Ger _ _ _ _ 42 sites site NOUN NNS Number=Plur _ _ _ _ 43 for for ADP IN _ _ _ _ _ 44 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 kappa kappa NOUN NN Number=Sing _ _ _ _ 47 B b NOUN NN Number=Sing _ _ _ _ 48 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 49 from from ADP IN _ _ _ _ _ 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 571 571 NUM CD NumType=Card _ _ _ _ 52 bp bp NOUN NN Number=Sing _ _ _ _ 53 to to ADP IN _ _ _ _ _ 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 459 459 NUM CD NumType=Card _ _ _ _ 56 bp bp NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 7202 # text = These findings suggest a molecular mechanism of positive regulation of PAFR gene expression by PAF through NF-kappa B, possibly by a phosphorylation reaction involving protein kinase C by PAF. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 6 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 positive positive ADJ JJ Degree=Pos _ _ _ _ 9 regulation regulation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 PAFR Pafr NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 PAF PAF PROPN NNP Number=Sing _ _ _ _ 16 through through ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 possibly possibly ADV RB _ _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 26 reaction reaction NOUN NN Number=Sing _ _ _ _ 27 involving involve VERB VBG VerbForm=Ger _ _ _ _ 28 protein protein NOUN NN Number=Sing _ _ _ _ 29 kinase kinase NOUN NN Number=Sing _ _ _ _ 30 C C PROPN NNP Number=Sing _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 PAF PAF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7203 # text = Document 0030011031 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011031 0030011031 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7204 # text = Immunosuppression by glucocorticoids: inhibition of NF-kappa B activity through induction of I kappa B synthesis [see comments] 1 Immunosuppression Immunosuppression NOUN NN Number=Sing _ _ _ _ 2 by by ADP IN _ _ _ _ _ 3 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ 5 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 through through ADP IN _ _ _ _ _ 13 induction induction NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 kappa kappa PROPN NNP Number=Sing _ _ _ _ 17 B B PROPN NNP Number=Sing _ _ _ _ 18 synthesis synthesis PROPN NNPS Number=Plur _ _ _ _ 19 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 see see VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 21 comments comment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 7205 # text = Glucocorticoids are among the most potent anti-inflammatory and immunosuppressive agents. 1 Glucocorticoids Glucocorticoid NOUN NNS Number=Plur _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 among among ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 most most ADV RBS _ _ _ _ _ 6 potent potent ADJ JJ Degree=Pos _ _ _ _ 7 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 10 agents agent NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 7206 # text = They inhibit synthesis of almost all known cytokines and of several cell surface molecules required for immune function, but the mechanism underlying this activity has been unclear. 1 They they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 2 inhibit inhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 almost almost ADV RB _ _ _ _ _ 6 all all DET DT _ _ _ _ _ 7 known known ADJ JJ Degree=Pos _ _ _ _ 8 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 several several ADJ JJ Degree=Pos _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 surface surface NOUN NN Number=Sing _ _ _ _ 14 molecules molecule NOUN NNS Number=Plur _ _ _ _ 15 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 immune immune VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 23 underlying underly VERB VBG VerbForm=Ger _ _ _ _ 24 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ _ 26 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 28 unclear unclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 7207 # text = Here it is shown that glucocorticoids are potent inhibitors of nuclear factor kappa B (NF-kappa B) activation in mice and cultured cells. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 potent potent ADJ JJ Degree=Pos _ _ _ _ 9 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 mice mouse NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 cultured culture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 7208 # text = This inhibition is mediated by induction of the I kappa B alpha inhibitory protein, which traps activated NF-kappa B in inactive cytoplasmic complexes. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 induction induction NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 I I PROPN NNP Number=Sing _ _ _ _ 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B b PROPN NNP Number=Sing _ _ _ _ 12 alpha alpha ADP IN _ _ _ _ _ 13 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 traps traps NOUN NNS Number=Plur _ _ _ _ 18 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa NOUN NN Number=Sing _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 25 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 26 complexes complexe NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 7209 # text = Because NF-kappa B activates many immunoregulatory genes in response to pro-inflammatory stimuli, the inhibition of its activity can be a major component of the anti-inflammatory activity of glucocorticoids. 1 Because because SCONJ IN _ _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa PROPN NNP Number=Sing _ _ _ _ 5 B b PROPN NNP Number=Sing _ _ _ _ 6 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 many many ADJ JJ Degree=Pos _ _ _ _ 8 immunoregulatory immunoregulatory ADJ JJ Degree=Pos _ _ _ _ 9 genes gene NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 response response NOUN NN Number=Sing _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 pro-inflammatory pro-inflammatory VERB VB VerbForm=Inf _ _ _ _ 14 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 can can AUX MD VerbForm=Fin _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 major major ADJ JJ Degree=Pos _ _ _ _ 25 component component NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 29 activity activity NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7210 # text = Document 0030011033 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011033 0030011033 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7211 # text = Calcium signalling in T cells stimulated by a cyclophilin B-binding protein. 1 Calcium calcium PROPN NNP Number=Sing _ _ _ _ 2 signalling signall VERB VBG VerbForm=Ger _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 T T PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 cyclophilin cyclophilin NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7212 # text = The immunosuppressant drug cyclosporin A blocks a calcium-dependent signal from the T-cell receptor (TCR) that normally leads to T-cell activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 immunosuppressant immunosuppressant ADJ JJ Degree=Pos _ _ _ _ 3 drug drug NOUN NN Number=Sing _ _ _ _ 4 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 5 A a NOUN NN Number=Sing _ _ _ _ 6 blocks block NOUN NNS Number=Plur _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 11 signal signal NOUN NN Number=Sing _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 normally normally ADV RB _ _ _ _ _ 22 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 7213 # text = When bound to cyclophilin, cyclosporin 1 When when ADV WRB PronType=Int _ _ _ _ 2 bound bound ADJ JJ Degree=Pos _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 cyclophilin cyclophilin NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ # sent_id = 7214 # text = A binds and inactivates the key signalling intermediate calcineurin. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 binds bind NOUN NNS Number=Plur _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 inactivates inactivate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 key key NOUN NN Number=Sing _ _ _ _ 7 signalling signall VERB VBG VerbForm=Ger _ _ _ _ 8 intermediate intermediate ADJ JJ Degree=Pos _ _ _ _ 9 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 7215 # text = To identify potential cellular homologues of cyclosporin 1 To to PART TO _ _ _ _ _ 2 identify identify VERB VB VerbForm=Inf _ _ _ _ 3 potential potential ADJ JJ Degree=Pos _ _ _ _ 4 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 5 homologues homologue NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ # sent_id = 7216 # text = A that might regulate calcium signalling, we have cloned human genes encoding cyclophilin B-binding-proteins using the yeast two-hybrid system. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 3 might might AUX MD VerbForm=Fin _ _ _ _ 4 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 5 calcium calcium NOUN NN Number=Sing _ _ _ _ 6 signalling signalling NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 9 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 genes gene NOUN NNS Number=Plur _ _ _ _ 13 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 14 cyclophilin cyclophilin NOUN NN Number=Sing _ _ _ _ 15 B- B- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 binding bind VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 proteins protein NOUN NNS Number=Plur _ _ _ _ 19 using use VERB VBG VerbForm=Ger _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 yeast yeast ADJ JJS Degree=Sup _ _ _ _ 22 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 hybrid hybrid NOUN NN Number=Sing _ _ _ _ 25 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 7217 # text = One gene product, when overexpressed in Jurkat T cells, specifically induced transcription from the interleukin-2 enhancer, by activating the T-cell-specific transcription factors NF-AT and NF-IL2A. 1 One one NUM CD NumType=Card _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 product product NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 when when ADV WRB PronType=Int _ _ _ _ 6 overexpressed overexpress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 9 T T PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 specifically specifically ADV RB _ _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ _ 20 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 by by SCONJ IN _ _ _ _ _ 23 activating activat VERB VBG VerbForm=Ger _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 specific specific ADJ JJ Degree=Pos _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 factors factor NOUN NNS Number=Plur _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 AT AT PROPN NNP Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 IL2A IL2A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 7218 # text = This protein, termed calcium-signal modulating cyclophilin ligand (CAML), acts downstream of the TCR and upstream of calcineurin by causing an influx of calcium. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 calcium- calcium- PUNCT , _ _ _ _ SpaceAfter=No 6 signal signal VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 7 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 8 cyclophilin cyclophilin NOUN NN Number=Sing _ _ _ _ 9 ligand ligand NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 CAML CAML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 downstream downstream NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 TCR Tcr NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 upstream upstream NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 23 by by SCONJ IN _ _ _ _ _ 24 causing cause VERB VBG VerbForm=Ger _ _ _ _ 25 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 influx influx NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 7219 # text = CAML appears to be a new participant in the calcium-signal transduction pathway, implicating cyclophilin B in calcium signalling, even in the absence of cyclosporin. 1 CAML caml NOUN NN Number=Sing _ _ _ _ 2 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 be be AUX VB VerbForm=Inf _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 new new ADJ JJ Degree=Pos _ _ _ _ 7 participant participant NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 calcium- calcium- SYM SYM _ _ _ _ SpaceAfter=No 11 signal signal NOUN NN Number=Sing _ _ _ _ 12 transduction transduction NOUN NN Number=Sing _ _ _ _ 13 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 implicating implicate VERB VBG VerbForm=Ger _ _ _ _ 16 cyclophilin cyclophilin NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 calcium calcium NOUN NN Number=Sing _ _ _ _ 20 signalling signalling NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 even even ADV RB _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 absence absence NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7220 # text = Document 0030011036 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011036 0030011036 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7221 # text = Characterization of defensin resistance phenotypes associated with mutations in the phoP virulence regulon of Salmonella typhimurium. 1 Characterization Characterization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 defensin defensin ADJ JJ Degree=Pos _ _ _ _ 4 resistance resistance NOUN NN Number=Sing _ _ _ _ 5 phenotypes phenotype NOUN NNS Number=Plur _ _ _ _ 6 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 mutations mutation NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 phoP phoP NOUN NN Number=Sing _ _ _ _ 12 virulence virulence NOUN NN Number=Sing _ _ _ _ 13 regulon regulon NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 Salmonella Salmonella PROPN NNP Number=Sing _ _ _ _ 16 typhimurium typhimurium NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7222 # text = The defensin sensitivities of Salmonella typhimurium strains with mutations in the phoP/phoQ two-component virulence regulon were tested by using purified defensins NP-1 and NP-2. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 defensin defensin NOUN NN Number=Sing _ _ _ _ 3 sensitivities sensitivity NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Salmonella Salmonella PROPN NNP Number=Sing _ _ _ _ 6 typhimurium typhimurium NOUN NN Number=Sing _ _ _ _ 7 strains strain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 mutations mutation NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 phoP/ phop/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 phoQ phoq NOUN NN Number=Sing _ _ _ _ 14 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 component component ADJ JJ Degree=Pos _ _ _ _ 17 virulence virulence NOUN NN Number=Sing _ _ _ _ 18 regulon regulon NOUN NN Number=Sing _ _ _ _ 19 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 tested test VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by SCONJ IN _ _ _ _ _ 22 using use VERB VBG VerbForm=Ger _ _ _ _ 23 purified purified VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 defensins defensin NOUN NNS Number=Plur _ _ _ _ 25 NP NP SYM NFP _ _ _ _ SpaceAfter=No 26 - - SYM SYM _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 NP Np NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 7223 # text = Strains with mutations in either gene of the regulatory pair (phoP [transcriptional activator] or phoQ [membrane sensor kinase]) had increased sensitivities to defensin. 1 Strains Strain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 mutations mutation NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 either either DET DT _ _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 10 pair pair NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 phoP phop NOUN NN Number=Sing _ _ _ _ 13 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 15 activator activator NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ] ] PUNCT -RRB- _ _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 phoQ phoq NOUN NN Number=Sing _ _ _ _ 19 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 membrane membrane NOUN NN Number=Sing _ _ _ _ 21 sensor sensor NOUN NN Number=Sing _ _ _ _ 22 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 sensitivities sensitivity NOUN NNS Number=Plur _ _ _ _ 28 to to PART TO _ _ _ _ _ 29 defensin defensin VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 7224 # text = The predicted periplasmic domain of the PhoQ protein contained a markedly anionic domain that could interact with cationic proteins and that could be responsible for resistance to defensin. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 predicted predict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 periplasmic periplasmic ADJ JJ Degree=Pos _ _ _ _ 4 domain domain NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 PhoQ Phoq PROPN NNP Number=Sing _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 contained contain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 markedly markedly ADV RB _ _ _ _ _ 12 anionic anionic ADJ JJ Degree=Pos _ _ _ _ 13 domain domain NOUN NN Number=Sing _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 could could AUX MD VerbForm=Fin _ _ _ _ 16 interact interact VERB VB VerbForm=Inf _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 cationic cationic ADJ JJ Degree=Pos _ _ _ _ 19 proteins protein NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 22 could could AUX MD VerbForm=Fin _ _ _ _ 23 be be AUX VB VerbForm=Inf _ _ _ _ 24 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 resistance resistance NOUN NN Number=Sing _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 defensin defensin VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 7225 # text = Because insertion mutations in phoP are polar on phoQ, we constructed strains that expressed the PhoQ protein in the absence of PhoP to test whether resistance to defensin requires only the phoQ gene product. 1 Because because SCONJ IN _ _ _ _ _ 2 insertion insertion NOUN NN Number=Sing _ _ _ _ 3 mutations mutation NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 phoP phop NOUN NN Number=Sing _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 polar polar ADJ JJ Degree=Pos _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 phoQ phoq NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 12 constructed construct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 strains strain NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 expressed express VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 PhoQ Phoq NOUN NN Number=Sing _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 absence absence NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 PhoP phop NOUN NN Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 test test VERB VB VerbForm=Inf _ _ _ _ 26 whether whether SCONJ IN _ _ _ _ _ 27 resistance resistance NOUN NN Number=Sing _ _ _ _ 28 to to PART TO _ _ _ _ _ 29 defensin defensin VERB VB VerbForm=Inf _ _ _ _ 30 requires require NOUN NNS Number=Plur _ _ _ _ 31 only only ADV RB _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 phoQ phoq NOUN NN Number=Sing _ _ _ _ 34 gene gene NOUN NN Number=Sing _ _ _ _ 35 product product NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 7226 # text = We found that resistance to defensin requires the function of both components of this regulatory system, because strains expressing PhoQ without PhoP were still markedly sensitive to defensins. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 resistance resistance NOUN NN Number=Sing _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 defensin defensin VERB VB VerbForm=Inf _ _ _ _ 7 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 function function NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 both both DET DT _ _ _ _ _ 12 components component NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 15 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 16 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 because because SCONJ IN _ _ _ _ _ 19 strains strain NOUN NNS Number=Plur _ _ _ _ 20 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 21 PhoQ Phoq PROPN NNP Number=Sing _ _ _ _ 22 without without ADP IN _ _ _ _ _ 23 PhoP phop PROPN NNP Number=Sing _ _ _ _ 24 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 still still ADV RB _ _ _ _ _ 26 markedly markedly ADV RB _ _ _ _ _ 27 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 defensins defensin NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 7227 # text = This implied that a pag (phoP-activated gene) product is responsible for defensin resistance. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 implied imply VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 pag pag NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 phoP- phoP- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 product product NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 defensin defensin ADJ JJ Degree=Pos _ _ _ _ 16 resistance resistance NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 7228 # text = We also tested for the ability of defensins NP-1, NP-5, and HNP-1 to activate pag expression and found that these peptides have no effect. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 tested test VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 ability ability NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 defensins defensin NOUN NNS Number=Plur _ _ _ _ 9 NP NP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 NP NP NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 HNP HNP NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 activate activate VERB VB VerbForm=Inf _ _ _ _ 23 pag pag NOUN NN Number=Sing _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 that that SCONJ IN _ _ _ _ _ 28 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 29 peptides peptide NOUN NNS Number=Plur _ _ _ _ 30 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 no no DET DT _ _ _ _ _ 32 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 7229 # text = Defensin resistance is not the only virulence characteristic controlled by the PhoP-PhoQ regulon because mutations in pagC, as well as ones in the phoP locus that resulted in constitutive pag activation (phenotype PhoPc), had no effect on defensin resistance, even though they rendered the organism avirulent and deficient in survival within macrophages. 1 Defensin Defensin PROPN NNP Number=Sing _ _ _ _ 2 resistance resistance NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 only only ADJ JJ Degree=Pos _ _ _ _ 7 virulence virulence NOUN NN Number=Sing _ _ _ _ 8 characteristic characteristic NOUN NN Number=Sing _ _ _ _ 9 controlled controll VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 PhoP phop NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 PhoQ Phoq NOUN NN Number=Sing _ _ _ _ 15 regulon regulon NOUN NN Number=Sing _ _ _ _ 16 because because SCONJ IN _ _ _ _ _ 17 mutations mutation NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 pagC pagC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 as as ADV RB _ _ _ _ _ 22 well well ADV RB Degree=Pos _ _ _ _ 23 as as ADP IN _ _ _ _ _ 24 ones one NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 phoP phop NOUN NN Number=Sing _ _ _ _ 28 locus locus NOUN NN Number=Sing _ _ _ _ 29 that that PRON WDT PronType=Rel _ _ _ _ 30 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 33 pag pag NOUN NN Number=Sing _ _ _ _ 34 activation activation NOUN NN Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 37 PhoPc PhoPc NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 41 no no DET DT _ _ _ _ _ 42 effect effect NOUN NN Number=Sing _ _ _ _ 43 on on ADP IN _ _ _ _ _ 44 defensin defensin NOUN NN Number=Sing _ _ _ _ 45 resistance resistance NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 even even ADV RB _ _ _ _ _ 48 though though SCONJ IN _ _ _ _ _ 49 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 50 rendered render VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 organism organism NOUN NN Number=Sing _ _ _ _ 53 avirulent avirulent ADJ JJ Degree=Pos _ _ _ _ 54 and and CCONJ CC _ _ _ _ _ 55 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 56 in in ADP IN _ _ _ _ _ 57 survival survival NOUN NN Number=Sing _ _ _ _ 58 within within ADP IN _ _ _ _ _ 59 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 7230 # text = The virulence defect conferred by mutations in the phoP-phoQ two-component regulatory system is not completely explained by alterations in resistance to cationic proteins and involves the control of other proteins necessary for S. typhimurium survival within macrophages. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 virulence virulence NOUN NN Number=Sing _ _ _ _ 3 defect defect NOUN NN Number=Sing _ _ _ _ 4 conferred confer VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 mutations mutation NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 phoP- phop- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 phoQ phoq NOUN NN Number=Sing _ _ _ _ 11 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 component component ADJ JJ Degree=Pos _ _ _ _ 14 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 15 system system NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 not not PART RB _ _ _ _ _ 18 completely completely ADV RB _ _ _ _ _ 19 explained explain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 alterations alteration NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 resistance resistance NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 cationic cationic ADJ JJ Degree=Pos _ _ _ _ 26 proteins protein NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 control control NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 other other ADJ JJ Degree=Pos _ _ _ _ 33 proteins protein NOUN NNS Number=Plur _ _ _ _ 34 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 S. S. PROPN NNP Number=Sing _ _ _ _ 37 typhimurium typhimurium NOUN NN Number=Sing _ _ _ _ 38 survival survival NOUN NN Number=Sing _ _ _ _ 39 within within ADP IN _ _ _ _ _ 40 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7231 # text = Document 0030011040 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011040 0030011040 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7232 # text = AP-1 derived from mature monocytes and astrocytes preferentially interacts with the HTLV-I promoter central 21 bp repeat. 1 AP ap SYM NFP _ _ _ _ SpaceAfter=No 2 - - SYM SYM _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 mature mature ADJ JJ Degree=Pos _ _ _ _ 7 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 astrocytes astrocyte NOUN NNS Number=Plur _ _ _ _ 10 preferentially preferentially ADV RB _ _ _ _ _ 11 interacts interact VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 17 promoter promoter VERB VB VerbForm=Inf _ _ _ _ 18 central central ADJ JJ Degree=Pos _ _ _ _ 19 21 21 NUM CD NumType=Card _ _ _ _ 20 bp bp NOUN NN Number=Sing _ _ _ _ 21 repeat repeat VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7233 # text = Characterization of the cellular transcription factors interacting with the human T cell lymphotropic virus type I (HTLV-I) long terminal repeat (LTR) is essential to dissecting the mechanisms involved in viral transcription that may be pertinent to the oncogenic and neuropathogenic processes associated with HTLV-I infection in both the immune and nervous systems. 1 Characterization Characterization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factors factor NOUN NNS Number=Plur _ _ _ _ 7 interacting interact VERB VBG VerbForm=Ger _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 T T PROPN NNP Number=Sing _ _ _ _ 12 cell cell PROPN NNP Number=Sing _ _ _ _ 13 lymphotropic lymphotropic ADJ JJ Degree=Pos _ _ _ _ 14 virus virus NOUN NN Number=Sing _ _ _ _ 15 type type NOUN NN Number=Sing _ _ _ _ 16 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 long long ADJ JJ Degree=Pos _ _ _ _ 23 terminal terminal NOUN NN Number=Sing _ _ _ _ 24 repeat repeat NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 essential essential ADJ JJ Degree=Pos _ _ _ _ 30 to to SCONJ IN _ _ _ _ _ 31 dissecting dissect VERB VBG VerbForm=Ger _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 34 involved involved ADJ JJ Degree=Pos _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 viral viral ADJ JJ Degree=Pos _ _ _ _ 37 transcription transcription NOUN NN Number=Sing _ _ _ _ 38 that that PRON WDT PronType=Rel _ _ _ _ 39 may may AUX MD VerbForm=Fin _ _ _ _ 40 be be AUX VB VerbForm=Inf _ _ _ _ 41 pertinent pertinent ADJ JJ Degree=Pos _ _ _ _ 42 to to ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 oncogenic oncogenic ADJ JJ Degree=Pos _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 neuropathogenic neuropathogenic ADJ JJ Degree=Pos _ _ _ _ 47 processes process NOUN NNS Number=Plur _ _ _ _ 48 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 49 with with ADP IN _ _ _ _ _ 50 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT , _ _ _ _ SpaceAfter=No 52 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 53 infection infection NOUN NN Number=Sing _ _ _ _ 54 in in ADP IN _ _ _ _ _ 55 both both CCONJ CC _ _ _ _ _ 56 the the DET DT Definite=Def|PronType=Art _ _ _ _ 57 immune immune ADJ JJ Degree=Pos _ _ _ _ 58 and and CCONJ CC _ _ _ _ _ 59 nervous nervous ADJ JJ Degree=Pos _ _ _ _ 60 systems system NOUN NNS Number=Plur _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ _ # sent_id = 7234 # text = Electrophoretic mobility shift (EMS) analyses utilizing oligonucleotides homologous to each of the 21 bp repeat elements reacted with nuclear extracts derived from cell lines of lymphocytic, monocytic, neuronal, and glial cell origin have demonstrated differential binding of cellular factors to the three 21 bp repeats (1-4). 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 EMS EMS NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 analyses analyse NOUN NNS Number=Plur _ _ _ _ 8 utilizing utilizing VERB VBG VerbForm=Ger _ _ _ _ 9 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 10 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 each each DET DT _ _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 21 21 NUM CD NumType=Card _ _ _ _ 16 bp bp NOUN NN Number=Sing _ _ _ _ 17 repeat repeat ADJ JJ Degree=Pos _ _ _ _ 18 elements element NOUN NNS Number=Plur _ _ _ _ 19 reacted react VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 22 extracts extract NOUN NNS Number=Plur _ _ _ _ 23 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 lines line NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 lymphocytic lymphocytic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 monocytic monocytic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 neuronal neuronal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 glial glial ADJ JJ Degree=Pos _ _ _ _ 36 cell cell NOUN NN Number=Sing _ _ _ _ 37 origin origin NOUN NN Number=Sing _ _ _ _ 38 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 39 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 differential differential ADJ JJ Degree=Pos _ _ _ _ 41 binding binding NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 44 factors factor NOUN NNS Number=Plur _ _ _ _ 45 to to ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 three three NUM CD NumType=Card _ _ _ _ 48 21 21 NUM CD NumType=Card _ _ _ _ 49 bp bp NOUN NN Number=Sing _ _ _ _ 50 repeats repeat NOUN NNS Number=Plur _ _ _ _ 51 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 52 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 53 - - SYM SYM _ _ _ _ SpaceAfter=No 54 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 55 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 7235 # text = ATF/CREB and Sp family members interacted with the 21 bp repeats to form DNA-protein complexes common to all cell types examined. 1 ATF/CREB Atf/creb PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 Sp sp ADJ JJ Degree=Pos _ _ _ _ 4 family family NOUN NN Number=Sing _ _ _ _ 5 members member NOUN NNS Number=Plur _ _ _ _ 6 interacted interact VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 21 21 NUM CD NumType=Card _ _ _ _ 10 bp bp NOUN NN Number=Sing _ _ _ _ 11 repeats repeat VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 form form VERB VB VerbForm=Inf _ _ _ _ 14 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 complexes complex NOUN NNS Number=Plur _ _ _ _ 18 common common ADJ JJ Degree=Pos _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 all all DET DT _ _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 types type NOUN NNS Number=Plur _ _ _ _ 23 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 7236 # text = However, a unique DNA-protein complex was detected when the promoter central 21 bp repeat was reacted with nuclear extracts derived from either the U-373 MG glioblastoma cell line or the THP-1 mature monocytic cell line. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 unique unique ADJ JJ Degree=Pos _ _ _ _ 5 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 complex complex NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 when when ADV WRB PronType=Int _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 central central ADJ JJ Degree=Pos _ _ _ _ 15 21 21 NUM CD NumType=Card _ _ _ _ 16 bp bp NOUN NN Number=Sing _ _ _ _ 17 repeat repeat NOUN NN Number=Sing _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 reacted react VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 22 extracts extract NOUN NNS Number=Plur _ _ _ _ 23 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 either either CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 U- u- NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 373 373 NUM CD NumType=Card _ _ _ _ 29 MG MG PROPN NNP Number=Sing _ _ _ _ 30 glioblastoma glioblastoma NOUN NN Number=Sing _ _ _ _ 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 line line NOUN NN Number=Sing _ _ _ _ 33 or or CCONJ CC _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ _ 38 mature mature NOUN NN Number=Sing _ _ _ _ 39 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 7237 # text = Based on nucleotide sequence requirements and immunoreactivity, we demonstrate that this DNA-protein complex is comprised of the AP-1 components, Fos and Jun. 1 Based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 on on ADP IN _ _ _ _ _ 3 nucleotide nucleotide ADJ JJ Degree=Pos _ _ _ _ 4 sequence sequence NOUN NN Number=Sing _ _ _ _ 5 requirements requirement NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 immunoreactivity immunoreactivity NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 10 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 13 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 complex complex NOUN NN Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 comprised comprise VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 components component NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 Fos Fos PROPN NNP Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7238 # text = Document 0030011041 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011041 0030011041 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7239 # text = Histamine modulates the expression of c-fos through cyclic AMP production via the H2 receptor in the human promonocytic cell line U937. 1 Histamine Histamine PRON PRP _ _ _ _ _ 2 modulates modulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 fos fo NOUN NNS Number=Plur _ _ _ _ 9 through through ADP IN _ _ _ _ _ 10 cyclic cyclic ADJ JJ Degree=Pos _ _ _ _ 11 AMP Amp NOUN NN Number=Sing _ _ _ _ 12 production production NOUN NN Number=Sing _ _ _ _ 13 via via ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 H2 h2 NOUN NN Number=Sing _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 line line NOUN NN Number=Sing _ _ _ _ 23 U937 U937 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7240 # text = We examined the effects of histamine and its agonists on the expression of the c-fos and c-myc proto-oncogenes at the transcriptional and translational levels in the human promonocytic U937 cell line. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effects effect NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 histamine histamine NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 9 agonists agonist NOUN NNS Number=Plur _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 c- c- SYM SYM _ _ _ _ SpaceAfter=No 16 fos fo NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 c- c- SYM NFP _ _ _ _ SpaceAfter=No 19 myc myc ADJ JJ Degree=Pos _ _ _ _ 20 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 -oncogenes -oncogene NOUN NNS Number=Plur _ _ _ _ 22 at at ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 translational translational ADJ JJ Degree=Pos _ _ _ _ 27 levels level NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 32 U937 U937 NOUN NN Number=Sing _ _ _ _ 33 cell cell NOUN NN Number=Sing _ _ _ _ 34 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 7241 # text = Histamine transiently increased cAMP and c-fos expression through H2 receptors. 1 Histamine Histamine ADV RB _ _ _ _ _ 2 transiently transiently ADV RB _ _ _ _ _ 3 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 cAMP camp NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 fos fo NOUN NNS Number=Plur _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 through through ADP IN _ _ _ _ _ 11 H2 H2 NUM CD NumType=Card _ _ _ _ 12 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 7242 # text = Dibutyryl cAMP also increased c-fos mRNA and protein, and levels remained elevated even after 12 hr of treatment. 1 Dibutyryl Dibutyryl PROPN NNP Number=Sing _ _ _ _ 2 cAMP camp PROPN NNP Number=Sing _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 c- c- SYM NFP _ _ _ _ SpaceAfter=No 6 fos fo NOUN NNS Number=Plur _ _ _ _ 7 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 levels level NOUN NNS Number=Plur _ _ _ _ 13 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 even even ADV RB _ _ _ _ _ 16 after after ADP IN _ _ _ _ _ 17 12 12 NUM CD NumType=Card _ _ _ _ 18 hr hr NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 7243 # text = Dose-dependence studies using histamine and dimaprit showed that the EC50 values for cAMP production and c-fos increase were similar, suggesting that cAMP might be involved in c-fos induction via H2 receptors. 1 Dose Dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 dependence dependence NOUN NN Number=Sing _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ _ 5 using use VERB VBG VerbForm=Ger _ _ _ _ 6 histamine histamine NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 dimaprit dimaprit NOUN NN Number=Sing _ _ _ _ 9 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 EC50 EC50 NOUN NN Number=Sing _ _ _ _ 13 values value NOUN NNS Number=Plur _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 cAMP camp NOUN NN Number=Sing _ _ _ _ 16 production production NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 fos fo NOUN NNS Number=Plur _ _ _ _ 21 increase increase NOUN NN Number=Sing _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 similar similar ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 cAMP camp PROPN NNP Number=Sing _ _ _ _ 28 might might AUX MD VerbForm=Fin _ _ _ _ 29 be be AUX VB VerbForm=Inf _ _ _ _ 30 involved involved ADJ JJ Degree=Pos _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 fos fos NOUN NN Number=Sing _ _ _ _ 35 induction induction NOUN NN Number=Sing _ _ _ _ 36 via via ADP IN _ _ _ _ _ 37 H2 H2 NUM CD NumType=Card _ _ _ _ 38 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 7244 # text = Furthermore, studies carried out using H7, a protein kinase A/protein kinase C inhibitor, blocked c-fos induction, whereas no effect was observed with bisindolylmaleimide, a specific protein kinase C inhibitor. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 carried carry VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 out out ADP RP _ _ _ _ _ 6 using use VERB VBG VerbForm=Ger _ _ _ _ 7 H7 H7 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 / / PUNCT , _ _ _ _ SpaceAfter=No 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 kinase kinase NOUN NN Number=Sing _ _ _ _ 16 C c NOUN NN Number=Sing _ _ _ _ 17 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 fos fo NOUN NNS Number=Plur _ _ _ _ 23 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 whereas whereas SCONJ IN _ _ _ _ _ 26 no no DET DT _ _ _ _ _ 27 effect effect NOUN NN Number=Sing _ _ _ _ 28 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 29 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 bisindolylmaleimide bisindolylmaleimide NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 specific specific ADJ JJ Degree=Pos _ _ _ _ 35 protein protein NOUN NN Number=Sing _ _ _ _ 36 kinase kinase NOUN NN Number=Sing _ _ _ _ 37 C c NOUN NN Number=Sing _ _ _ _ 38 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 7245 # text = No modification of c-myc expression could be detected on treatment with histamine or its analogues. 1 No no DET DT _ _ _ _ _ 2 modification modification NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 c- c- SYM NFP _ _ _ _ SpaceAfter=No 5 myc myc ADJ JJ Degree=Pos _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 could could AUX MD VerbForm=Fin _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 treatment treatment NOUN NN Number=Sing _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 histamine histamine NOUN NN Number=Sing _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 analogues analogue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 7246 # text = Nevertheless, dibutyryl cAMP induced a down-regulation of the levels of this proto-oncogene. 1 Nevertheless nevertheless ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 dibutyryl dibutyryl ADJ JJ Degree=Pos _ _ _ _ 4 cAMP camp NOUN NN Number=Sing _ _ _ _ 5 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 down down ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 -regulation -regulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 14 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 -oncogene -oncogene NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 7247 # text = In addition, dibutyryl cAMP inhibited cell growth in a dose-dependent manner, whereas histamine failed to affect proliferation and differentiation of U937 cells. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 dibutyryl dibutyryl ADJ JJ Degree=Pos _ _ _ _ 5 cAMP camp NOUN NN Number=Sing _ _ _ _ 6 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 growth growth NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 14 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 whereas whereas SCONJ IN _ _ _ _ _ 17 histamine histamine PRON PRP _ _ _ _ _ 18 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 affect affect VERB VB VerbForm=Inf _ _ _ _ 21 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 U937 U937 NUM CD NumType=Card _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 7248 # text = Cells pretreated with dimaprit showed a decrease in the cAMP response to subsequent addition of H2 agonists, whereas the cAMP response to prostaglandin E2 remained unaltered. 1 Cells cell NOUN NNS Number=Plur _ _ _ _ 2 pretreated pretreate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 dimaprit dimaprit NOUN NN Number=Sing _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 decrease decrease NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 cAMP camp NOUN NN Number=Sing _ _ _ _ 11 response response NOUN NN Number=Sing _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 14 addition addition NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 H2 H2 NUM CD NumType=Card _ _ _ _ 17 agonists agonist NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 whereas whereas SCONJ IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 cAMP camp PROPN NNP Number=Sing _ _ _ _ 22 response response NOUN NN Number=Sing _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 prostaglandin prostaglandin VERB VB VerbForm=Inf _ _ _ _ 25 E2 E2 NUM CD NumType=Card _ _ _ _ 26 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 unaltered unaltered ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 7249 # text = This homologous mechanism of H2 receptor desensitization was time dependent. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 3 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 H2 H2 NUM CD NumType=Card _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 desensitization desensitization NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 time time NOUN NN Number=Sing _ _ _ _ 10 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 7250 # text = These results indicate that histamine activates several mechanisms involved in the induction of differentiation, such as cAMP and c-fos production, but fails to promote differentiation of U937 cells, apparently due to the rapid desensitization of H2 receptors. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 histamine histamine PRON PRP _ _ _ _ _ 6 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 several several ADJ JJ Degree=Pos _ _ _ _ 8 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 9 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 such such ADJ JJ Degree=Pos _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 cAMP camp NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 fos fos NOUN NNS Number=Plur _ _ _ _ 23 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 but but CCONJ CC _ _ _ _ _ 26 fails fail VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 promote promote VERB VB VerbForm=Inf _ _ _ _ 29 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 U937 U937 NUM CD NumType=Card _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 apparently apparently ADV RB _ _ _ _ _ 35 due due ADP IN _ _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 39 desensitization desensitization NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 H2 H2 NUM CD NumType=Card _ _ _ _ 42 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7251 # text = Document 0030011047 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011047 0030011047 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7252 # text = Transcription mediated by NFAT is highly inducible in effector CD4+ T helper 2 (Th2) cells but not in Th1 cells. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 highly highly ADV RB _ _ _ _ _ 7 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 effector effector ADJ JJ Degree=Pos _ _ _ _ 10 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 + + SYM SYM _ _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 helper helper NOUN NN Number=Sing _ _ _ _ 14 2 2 NUM CD NumType=Card _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 Th2 th2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 Th1 Th1 NUM CD NumType=Card _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7253 # text = Transcriptional factors of the NFAT family play an important role in regulating the expression of several cytokine genes during the immune response, such as the genes for interleukin 2 (IL-2) and IL-4, among others. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 6 family family NOUN NN Number=Sing _ _ _ _ 7 play play VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 important important ADJ JJ Degree=Pos _ _ _ _ 10 role role NOUN NN Number=Sing _ _ _ _ 11 in in SCONJ IN _ _ _ _ _ 12 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 several several ADJ JJ Degree=Pos _ _ _ _ 17 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 18 genes gene NOUN NNS Number=Plur _ _ _ _ 19 during during ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 immune immune ADJ JJ Degree=Pos _ _ _ _ 22 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 such such ADJ JJ Degree=Pos _ _ _ _ 25 as as ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 genes gene NOUN NNS Number=Plur _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 30 2 2 NUM CD NumType=Card _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 2 2 X LS _ _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT , _ _ _ _ SpaceAfter=No 39 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 among among ADP IN _ _ _ _ _ 42 others other NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 7254 # text = Upon antigen stimulation, precursor CD4+ T helper (pTh) cells proliferate and differentiate into two populations of effector cells (eTh1 and eTh2), each one expressing a specific pattern of cytokines that distinguishes them from their precursors. 1 Upon upon ADP IN _ _ _ _ _ 2 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 3 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 precursor precursor NOUN NN Number=Sing _ _ _ _ 6 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 + + SYM SYM _ _ _ _ _ 8 T t NUM CD NumType=Card _ _ _ _ 9 helper helper NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 pTh pTh NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 proliferate proliferate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 differentiate differentiate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 into into ADP IN _ _ _ _ _ 18 two two NUM CD NumType=Card _ _ _ _ 19 populations population NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 effector effector NOUN NN Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 eTh1 eTh1 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 eTh2 eTh2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 each each DET DT _ _ _ _ _ 30 one one NOUN NN Number=Sing _ _ _ _ 31 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 specific specific ADJ JJ Degree=Pos _ _ _ _ 34 pattern pattern NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 37 that that PRON WDT PronType=Rel _ _ _ _ 38 distinguishes distinguish VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ _ 40 from from ADP IN _ _ _ _ _ 41 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 42 precursors precursor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 7255 # text = eTh2 cells are the major source of IL-4, while gamma interferon is produced by eTh1 cells. 1 eTh2 eTh2 NUM CD NumType=Card _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 major major ADJ JJ Degree=Pos _ _ _ _ 6 source source NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 while while SCONJ IN _ _ _ _ _ 13 gamma gamma NOUN NN Number=Sing _ _ _ _ 14 interferon interferon NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 produced produce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 eTh1 eTh1 NUM CD NumType=Card _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 7256 # text = Here we have used reporter transgenic mice to show that DNA binding and transcriptional activities of NFAT are transiently induced during the differentiation of pTh cells into either eTh1 or eTh2 cells to mediate the expression of IL-2 as a common growth factor in both pathways. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 reporter reporter NOUN NN Number=Sing _ _ _ _ 6 transgenic transgenic NOUN NN Number=Sing _ _ _ _ 7 mice mouse NOUN NNS Number=Plur _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 show show VERB VB VerbForm=Inf _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 DNA dna NOUN NN Number=Sing _ _ _ _ 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 15 activities activity NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 NFAT NFAT PRON DT Number=Sing|PronType=Dem _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 transiently transiently ADV RB _ _ _ _ _ 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 during during ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 pTh pTh ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 into into ADP IN _ _ _ _ _ 28 either either CCONJ CC _ _ _ _ _ 29 eTh1 eTh1 PROPN NNP Number=Sing _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 eTh2 eTh2 NUM CD NumType=Card _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 to to PART TO _ _ _ _ _ 34 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 2 2 NUM CD NumType=Card _ _ _ _ 41 as as ADP IN _ _ _ _ _ 42 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 common common ADJ JJ Degree=Pos _ _ _ _ 44 growth growth NOUN NN Number=Sing _ _ _ _ 45 factor factor NOUN NN Number=Sing _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 both both DET DT _ _ _ _ _ 48 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 7257 # text = However, although NFAT DNA binding is similarly induced in both eTh1 and eTh2 cells upon antigen stimulation, only the NFAT complexes present in eTh2 cells are able to mediate high-level transcription, and relatively little NFAT transcriptional activity was induced in eTh1 cells. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 although although SCONJ IN _ _ _ _ _ 4 NFAT NFAT SCONJ IN _ _ _ _ _ 5 DNA Dna NOUN NN Number=Sing _ _ _ _ 6 binding binding VERB VBG VerbForm=Ger _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 similarly similarly ADV RB _ _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 both both CCONJ CC _ _ _ _ _ 12 eTh1 eTh1 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 eTh2 eTh2 NUM CD NumType=Card _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 upon upon ADP IN _ _ _ _ _ 17 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 18 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 only only ADV RB _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 NFAT Nfat NOUN NN Number=Sing _ _ _ _ 23 complexes complexe NOUN NNS Number=Plur _ _ _ _ 24 present present ADJ JJ Degree=Pos _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 eTh2 eTh2 NUM CD NumType=Card _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 able able ADJ JJ Degree=Pos _ _ _ _ 30 to to PART TO _ _ _ _ _ 31 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 32 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 level level NOUN NN Number=Sing _ _ _ _ 35 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 relatively relatively ADV RB _ _ _ _ _ 39 little little ADJ JJ Degree=Pos _ _ _ _ 40 NFAT Nfat SCONJ IN _ _ _ _ _ 41 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 42 activity activity NOUN NN Number=Sing _ _ _ _ 43 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 44 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 eTh1 eTh1 NUM CD NumType=Card _ _ _ _ 47 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 7258 # text = In contrast to activated pTh cells, neither eTh1 nor eTh2 cells produced significant IL-2 upon stimulation, but the high levels of NFAT transcriptional activities directly correlate with the IL-4 production induced in response to antigen stimulation in eTh2 cells. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 pTh pTh NOUN NN Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 neither neither CCONJ CC _ _ _ _ _ 9 eTh1 eTh1 PROPN NNP Number=Sing _ _ _ _ 10 nor nor CCONJ CC _ _ _ _ _ 11 eTh2 eTh2 NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 significant significant ADJ JJ Degree=Pos _ _ _ _ 15 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 upon upon ADP IN _ _ _ _ _ 19 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 but but CCONJ CC _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 high high ADJ JJ Degree=Pos _ _ _ _ 24 levels level NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 27 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 28 activities activity NOUN NNS Number=Plur _ _ _ _ 29 directly directly ADV RB _ _ _ _ _ 30 correlate correlate ADV RB Degree=Pos _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 4 4 NUM CD NumType=Card _ _ _ _ 36 production production NOUN NN Number=Sing _ _ _ _ 37 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 response response NOUN NN Number=Sing _ _ _ _ 40 to to PART TO _ _ _ _ _ 41 antigen antigen VERB VB VerbForm=Inf _ _ _ _ 42 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 eTh2 eTh2 NUM CD NumType=Card _ _ _ _ 45 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 7259 # text = These data suggest that activated NFAT is involved in the effector function of eTh2 cells and that the failure of eTh1 cells to produce IL-4 in response to an antigen is due, at least partially, to a failure to induce high-level transcription of the IL-4 gene by NFAT. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 NFAT Nfat PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 involved involved ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 effector effector NOUN NN Number=Sing _ _ _ _ 12 function function NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 eTh2 eTh2 NUM CD NumType=Card _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 failure failure NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 eTh1 eTh1 NUM CD NumType=Card _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 produce produce VERB VB VerbForm=Inf _ _ _ _ 25 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 4 4 NUM CD NumType=Card _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 response response NOUN NN Number=Sing _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 antigen antigen NOUN NN Number=Sing _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 due due ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 at at ADV RB _ _ _ _ _ 37 least least ADV RBS Degree=Sup _ _ _ _ 38 partially partially ADV RB _ _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 to to ADP IN _ _ _ _ _ 41 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 failure failure NOUN NN Number=Sing _ _ _ _ 43 to to PART TO _ _ _ _ _ 44 induce induce VERB VB VerbForm=Inf _ _ _ _ 45 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 level level NOUN NN Number=Sing _ _ _ _ 48 transcription transcription NOUN NN Number=Sing _ _ _ _ 49 of of ADP IN _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 - - SYM SYM _ _ _ _ SpaceAfter=No 53 4 4 NUM CD NumType=Card _ _ _ _ 54 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 55 by by ADP IN _ _ _ _ _ 56 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 7260 # text = Regulation of NFAT could be therefore a critical element in the polarization to eTh1 or eTh2. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NFAT NFAT PRON DT Number=Sing|PronType=Dem _ _ _ _ 4 could could AUX MD VerbForm=Fin _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 therefore therefore ADV RB _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 critical critical ADJ JJ Degree=Pos _ _ _ _ 9 element element NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 polarization polarization NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 eTh1 eTh1 NUM CD NumType=Card _ _ _ _ 15 or or CCONJ CC _ _ _ _ _ 16 eTh2 eTh2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7261 # text = Document 0030011049 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011049 0030011049 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7262 # text = Protein kinase C and calcineurin synergize to activate IkappaB kinase and NF-kappaB in T lymphocytes. 1 Protein protein NOUN NN Number=Sing _ _ _ _ 2 kinase kinase NOUN NN Number=Sing _ _ _ _ 3 C C NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 6 synergize synergize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 activate activate VERB VB VerbForm=Inf _ _ _ _ 9 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ _ 10 kinase kinase NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7263 # text = The nuclear factor of kappaB (NF-kappaB) is a ubiquitous transcription factor that is key in the regulation of the immune response and inflammation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 key key ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 regulation regulation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 immune immune ADJ JJ Degree=Pos _ _ _ _ 25 response response NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 7264 # text = T cell receptor (TCR) cross-linking is in part required for activation of NF-kappaB, which is dependent on the phosphorylation and degradation of IkappaBalpha. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 receptor receptor NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 TCR TCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 -linking -linking NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 part part NOUN NN Number=Sing _ _ _ _ 12 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 which which PRON WDT PronType=Rel _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 23 on on ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 degradation degradation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 7265 # text = By using Jurkat and primary human T lymphocytes, we demonstrate that the simultaneous activation of two second messengers of the TCR-initiated signal transduction, protein kinase C (PKC) and calcineurin, results in the synergistic activation of the IkappaBalpha kinase (IKK) complex but not of another putative IkappaBalpha kinase, p90(rsk). 1 By by SCONJ IN _ _ _ _ _ 2 using use VERB VBG VerbForm=Ger _ _ _ _ 3 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 primary primary ADJ JJ Degree=Pos _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 T t NOUN NN Number=Sing _ _ _ _ 8 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 simultaneous simultaneous ADJ JJ Degree=Pos _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 two two NUM CD NumType=Card _ _ _ _ 18 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 19 messengers messenger NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 TCR Tcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 initiated initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 signal signal NOUN NN Number=Sing _ _ _ _ 26 transduction transduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 protein protein NOUN NN Number=Sing _ _ _ _ 29 kinase kinase NOUN NN Number=Sing _ _ _ _ 30 C C PROPN NNP Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 results result NOUN NNS Number=Plur _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 41 activation activation NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 45 kinase kinase NOUN NN Number=Sing _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 IKK IKK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ _ 49 complex complex ADJ JJ Degree=Pos _ _ _ _ 50 but but CCONJ CC _ _ _ _ _ 51 not not ADV RB _ _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 another another DET DT _ _ _ _ _ 54 putative putative ADJ JJ Degree=Pos _ _ _ _ 55 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 56 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 , , PUNCT , _ _ _ _ _ 58 p90 p90 NUM CD NumType=Card _ _ _ SpaceAfter=No 59 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 60 rsk rsk NOUN NN Number=Sing _ _ _ SpaceAfter=No 61 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 62 . . PUNCT . _ _ _ _ _ # sent_id = 7266 # text = We also demonstrate that the IKK complex, but not p90(rsk), is responsible for the in vivo phosphorylation of IkappaBalpha mediated by the co-activation of PKC and calcineurin. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 IKK IKK PROPN NNP Number=Sing _ _ _ _ 7 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 not not ADV RB _ _ _ _ _ 11 p90 p90 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 rsk rsk NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 vivo vivo NOUN NN Number=Sing _ _ _ _ 22 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 25 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 co-activation co-activation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 PKC Pkc NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 7267 # text = Each second messenger is necessary, as inhibition of either one reverses the activation of the IKK complex and IkappaBalpha phosphorylation in vivo. 1 Each each DET DT _ _ _ _ _ 2 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 messenger messenger NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 necessary necessary ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 either either CCONJ CC _ _ _ _ _ 11 one one NUM CD NumType=Card _ _ _ _ 12 reverses reverse VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 IKK IKK PROPN NNP Number=Sing _ _ _ _ 18 complex complex NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 21 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 vivo. vivo. NOUN NN Number=Sing _ _ _ _ # sent_id = 7268 # text = Overexpression of dominant negative forms of IKKalpha and -beta demonstrates that only IKKbeta is the target for PKC and calcineurin. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 4 negative negative ADJ JJ Degree=Pos _ _ _ _ 5 forms form NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 IKKalpha IKKalpha PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 beta beta NOUN NN Number=Sing _ _ _ _ 11 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 only only ADV RB _ _ _ _ _ 14 IKKbeta IKKbeta PROPN NNP Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 target target NOUN NN Number=Sing _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 PKC PKC NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 7269 # text = These results indicate that within the TCR/CD3 signal transduction pathway both PKC and calcineurin are required for the effective activation of the IKK complex and NF-kappaB in T lymphocytes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 within within ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 TCR/ Tcr/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 9 signal signal NOUN NN Number=Sing _ _ _ _ 10 transduction transduction NOUN NN Number=Sing _ _ _ _ 11 pathway pathway NOUN NN Number=Sing _ _ _ _ 12 both both CCONJ CC _ _ _ _ _ 13 PKC Pkc NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 effective effective ADJ JJ Degree=Pos _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 IKK IKK PROPN NNP Number=Sing _ _ _ _ 25 complex complex PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7270 # text = Document 0030011050 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011050 0030011050 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7271 # text = Attenuated function of a variant form of the helix-loop-helix protein, Id-3, generated by an alternative splicing mechanism. 1 Attenuated Attenuate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 function function NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 variant variant ADJ JJ Degree=Pos _ _ _ _ 6 form form NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 helix-loop helix-loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 helix helix NOUN NN Number=Sing _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 Id id PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 22 splicing splicing NOUN NN Number=Sing _ _ _ _ 23 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7272 # text = The Id family of helix-loop-helix proteins function as negative regulators of DNA binding, basic helix-loop-helix proteins in the regulation of cell growth and differentiation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Id id ADJ JJ Degree=Pos _ _ _ _ 3 family family NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 helix helix NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 -loop -loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 helix helix NOUN NN Number=Sing _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 function function NOUN NN Number=Sing _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 negative negative ADJ JJ Degree=Pos _ _ _ _ 13 regulators regulator NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 DNA dna NOUN NN Number=Sing _ _ _ _ 16 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 basic basic ADJ JJ Degree=Pos _ _ _ _ 19 helix helix NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 -loop -loop ADP IN _ _ _ _ SpaceAfter=No 21 -helix -helix ADJ JJ Degree=Pos _ _ _ _ 22 proteins protein NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 regulation regulation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 growth growth NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 7273 # text = We report here on the identification of a 17 kDa variant of the 14 kDa Id-3 protein termed Id-3L (long version) which possesses a unique 60 amino acid carboxy-terminus generated by read through of a 'coding intron' and alternative splicing. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 identification identification NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 17 17 NUM CD NumType=Card _ _ _ _ 10 kDa kDa NOUN NN Number=Sing _ _ _ _ 11 variant variant NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 14 14 NUM CD NumType=Card _ _ _ _ 15 kDa kDa PROPN NNP Number=Sing _ _ _ _ 16 Id id PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 3 3 NUM CD NumType=Card _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 Id id PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 3L 3L PROPN NNP Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 long long ADJ JJ Degree=Pos _ _ _ _ 26 version version NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 which which PRON WDT PronType=Rel _ _ _ _ 29 possesses possess VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 unique unique ADJ JJ Degree=Pos _ _ _ _ 32 60 60 NUM CD NumType=Card _ _ _ _ 33 amino amino DET DT _ _ _ _ _ 34 acid acid ADJ JJ Degree=Pos _ _ _ _ 35 carboxy carboxy NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 terminus terminus NOUN NN Number=Sing _ _ _ _ 38 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 by by ADP IN _ _ _ _ _ 40 read read VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 through through ADP IN _ _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 44 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 45 coding coding NOUN NN Number=Sing _ _ _ _ 46 intron intron NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 ' ' PUNCT '' _ _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 50 splicing splicing NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 7274 # text = Northern analysis revealed expression of a minor 1.1 kb 1 Northern northern ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 minor minor ADJ JJ Degree=Pos _ _ _ _ 8 1.1 1.1 NUM CD NumType=Card _ _ _ _ 9 kb kb NOUN NN Number=Sing _ _ _ _ # sent_id = 7275 # text = Id-3L transcript together with the predominant 0.95 kb 1 Id id PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 3L 3L AUX MD VerbForm=Fin _ _ _ _ 4 transcript transcriep VERB VB VerbForm=Inf _ _ _ _ 5 together together ADV RB _ _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 predominant predominant ADJ JJ Degree=Pos _ _ _ _ 9 0.95 0.95 NUM CD NumType=Card _ _ _ _ 10 kb kb NOUN NN Number=Sing _ _ _ _ # sent_id = 7276 # text = Id-3 transcript in the majority of adult human tissues analysed. 1 Id id PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 3 3 NUM CD NumType=Card _ _ _ _ 4 transcript transcript NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 majority majority NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 adult adult ADJ JJ Degree=Pos _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 tissues tissue NOUN NNS Number=Plur _ _ _ _ 12 analysed analyse VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 7277 # text = The variant Id-3L protein is functionally distinguishable from conventional Id-3 since in in vitro DNA mobility shift assays, it was greatly impaired in its ability to abrogate binding of the basic helix-loop-helix protein, E47, to an E box recognition sequence. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 variant variant ADJ JJ Degree=Pos _ _ _ _ 3 Id id NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 3L 3L NOUN NN Number=Sing _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 functionally functionally ADV RB _ _ _ _ _ 9 distinguishable distinguishable ADJ JJ Degree=Pos _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 conventional conventional ADJ JJ Degree=Pos _ _ _ _ 12 Id id PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 3 3 NUM CD NumType=Card _ _ _ _ 15 since since ADP IN _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 vitro vitro NUM CD NumType=Card _ _ _ _ 19 DNA dna NOUN NN Number=Sing _ _ _ _ 20 mobility mobility NOUN NN Number=Sing _ _ _ _ 21 shift shift NOUN NN Number=Sing _ _ _ _ 22 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 25 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 26 greatly greatly ADV RB _ _ _ _ _ 27 impaired impaire VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 30 ability ability NOUN NN Number=Sing _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 abrogate abrogate VERB VB VerbForm=Inf _ _ _ _ 33 binding binding VERB VBG VerbForm=Ger _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 basic basic ADJ JJ Degree=Pos _ _ _ _ 37 helix-loop helix-loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 -helix -helix NOUN NN Number=Sing _ _ _ _ 39 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 E47 E47 NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 to to ADP IN _ _ _ _ _ 44 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 45 E e NOUN NN Number=Sing _ _ _ _ 46 box box NOUN NN Number=Sing _ _ _ _ 47 recognition recognition NOUN NN Number=Sing _ _ _ _ 48 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7278 # text = Document 0030011051 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011051 0030011051 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7279 # text = Lipopolysaccharide is a potent monocyte/macrophage-specific stimulator of human immunodeficiency virus type 1 expression. 1 Lipopolysaccharide Lipopolysaccharide PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 potent potent NOUN NN Number=Sing _ _ _ _ 5 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 / / PUNCT , _ _ _ _ SpaceAfter=No 7 macrophage-specific macrophage-specific ADJ JJ Degree=Pos _ _ _ _ 8 stimulator stimulator NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 12 virus virus NOUN NN Number=Sing _ _ _ _ 13 type type NOUN NN Number=Sing _ _ _ _ 14 1 1 NUM CD NumType=Card _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7280 # text = Lipopolysaccharide (LPS) potently stimulates human immunodeficiency virus type 1-long terminal repeat (HIV-1-LTR) CAT constructs transfected into monocyte/macrophage-like cell lines but not a T cell line. 1 Lipopolysaccharide Lipopolysaccharide PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 potently potently ADV RB _ _ _ _ _ 6 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 9 virus virus NOUN NN Number=Sing _ _ _ _ 10 type type NOUN NN Number=Sing _ _ _ _ 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 long long ADJ JJ Degree=Pos _ _ _ _ 14 terminal terminal NOUN NN Number=Sing _ _ _ _ 15 repeat repeat NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 LTR Ltr NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 CAT Cat NOUN NN Number=Sing _ _ _ _ 24 constructs construct NOUN NNS Number=Plur _ _ _ _ 25 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 into into ADP IN _ _ _ _ _ 27 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 / / PUNCT , _ _ _ _ SpaceAfter=No 29 macrophage-like macrophage-like ADJ JJ Degree=Pos _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 lines line NOUN NNS Number=Plur _ _ _ _ 32 but but CCONJ CC _ _ _ _ _ 33 not not ADV RB _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 T t PROPN NNP Number=Sing _ _ _ _ 36 cell cell NOUN NN Number=Sing _ _ _ _ 37 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 7281 # text = This effect appears to be mediated through the induction of nuclear factor kappa B (NF-kappa B). 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 through through ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 7282 # text = Electrophoretic mobility shift assays demonstrate that LPS induces a DNA binding activity indistinguishable from NF-kappa B in U937 and THP-1 cells. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assays assay NOUN NNS Number=Plur _ _ _ _ 5 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 LPS LPS PROPN NNP Number=Sing _ _ _ _ 8 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 indistinguishable indistinguishable ADJ JJ Degree=Pos _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B b PROPN NNP Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 U937 U937 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 7283 # text = LPS is also shown to dramatically increase HIV-1 production from a chronically infected monocyte/macrophage-like cloned cell line, U1, which produces very low levels of HIV-1 at baseline. 1 LPS Lps NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 dramatically dramatically ADV RB _ _ _ _ _ 7 increase increase VERB VB VerbForm=Inf _ _ _ _ 8 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 production production NOUN NN Number=Sing _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 chronically chronically ADV RB _ _ _ _ _ 15 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 macrophage macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 like like ADP IN _ _ _ _ _ 21 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 U1 U1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 which which PRON WDT PronType=Rel _ _ _ _ 28 produces produce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 very very ADV RB _ _ _ _ _ 30 low low ADJ JJ Degree=Pos _ _ _ _ 31 levels level NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ _ 36 at at ADP IN _ _ _ _ _ 37 baseline baseline NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 7284 # text = The stimulation of viral production from this cell line occurs only if these cells are treated with granulocyte/macrophage colony-stimulating factor (GM-CSF) before treatment with LPS. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 viral viral ADJ JJ Degree=Pos _ _ _ _ 5 production production NOUN NN Number=Sing _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 line line NOUN NN Number=Sing _ _ _ _ 10 occurs occur NOUN NNS Number=Plur _ _ _ _ 11 only only ADV RB _ _ _ _ _ 12 if if SCONJ IN _ _ _ _ _ 13 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 treated treat VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 / / PUNCT , _ _ _ _ SpaceAfter=No 20 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 21 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 before before ADP IN _ _ _ _ _ 31 treatment treatment NOUN NN Number=Sing _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 7285 # text = This stimulation of HIV-1 production is correlated with an increase in the level of HIV-1 RNA and and activation of NF-kappa B. LPS is not able to induce HIV-1 production in a cloned T cell line. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 production production NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 correlated correlate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 increase increase NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 level level NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 RNA RNa NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ 30 LPS Lps NOUN NN Number=Sing _ _ _ _ 31 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 not not PART RB _ _ _ _ _ 33 able able ADJ JJ Degree=Pos _ _ _ _ 34 to to PART TO _ _ _ _ _ 35 induce induce VERB VB VerbForm=Inf _ _ _ _ 36 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 1 1 NUM CD NumType=Card _ _ _ _ 39 production production NOUN NN Number=Sing _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 T t PROPN NNP Number=Sing _ _ _ _ 44 cell cell NOUN NN Number=Sing _ _ _ _ 45 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 7286 # text = The effect of LPS on HIV-1 replication occurs at picogram per milliliter concentrations and may be clinically significant in understanding the variability of the natural history of HIV-1 infection. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 LPS LPS PROPN NNP Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 replication replication NOUN NN Number=Sing _ _ _ _ 10 occurs occur NOUN NNS Number=Plur _ _ _ _ 11 at at ADP IN _ _ _ _ _ 12 picogram picogram NOUN NN Number=Sing _ _ _ _ 13 per per ADP IN _ _ _ _ _ 14 milliliter milliliter NOUN NN Number=Sing _ _ _ _ 15 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 may may AUX MD VerbForm=Fin _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 clinically clinically ADV RB _ _ _ _ _ 20 significant significant ADJ JJ Degree=Pos _ _ _ _ 21 in in SCONJ IN _ _ _ _ _ 22 understanding understand VERB VBG VerbForm=Ger _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 variability variability NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 natural natural ADJ JJ Degree=Pos _ _ _ _ 28 history history NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ _ 33 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7287 # text = Document 0030011054 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011054 0030011054 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7288 # text = Targeted disruption of the MyD88 gene results in loss of IL-1- and IL-18-mediated function. 1 Targeted target VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 disruption disruption NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 MyD88 MyD88 PROPN NNP Number=Sing _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 results result NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 loss loss NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 18 18 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7289 # text = MyD88, originally isolated as a myeloid differentiation primary response gene, is shown to act as an adaptor in interleukin-1 (IL-1) signaling by interacting with both the IL-1 receptor complex and IL-1 receptor-associated kinase (IRAK). 1 MyD88 MyD88 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 originally originally ADV RB _ _ _ _ _ 4 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 8 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 9 primary primary ADJ JJ Degree=Pos _ _ _ _ 10 response response NOUN NN Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 act act VERB VB VerbForm=Inf _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 adaptor adaptor NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 X LS _ _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 30 by by SCONJ IN _ _ _ _ _ 31 interacting interact VERB VBG VerbForm=Ger _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 both both CCONJ CC _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT , _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ _ 38 receptor receptor NOUN NN Number=Sing _ _ _ _ 39 complex complex NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 1 1 NUM CD NumType=Card _ _ _ _ 44 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 kinase kinase NOUN NN Number=Sing _ _ _ _ 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 IRAK IRAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 7290 # text = Mice generated by gene targeting to lack MyD88 have defects in T cell proliferation as well as induction of acute phase proteins and cytokines in response to IL-1. 1 Mice mouse NOUN NN Number=Sing _ _ _ _ 2 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 targeting target VERB VBG VerbForm=Ger _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 lack lack VERB VB VerbForm=Inf _ _ _ _ 8 MyD88 MyD88 PROPN NNP Number=Sing _ _ _ _ 9 have have VERB VB VerbForm=Inf _ _ _ _ 10 defects defect NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 T T PROPN NNP Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 15 as as ADV RB _ _ _ _ _ 16 well well ADV RB Degree=Pos _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 induction induction NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 acute acute ADJ JJ Degree=Pos _ _ _ _ 21 phase phase NOUN NN Number=Sing _ _ _ _ 22 proteins protein NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 response response NOUN NN Number=Sing _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 7291 # text = Increases in interferon-gamma production and natural killer cell activity in response to IL-18 are abrogated. 1 Increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 interferon interferon ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 gamma gamma NOUN NN Number=Sing _ _ _ _ 6 production production NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 natural natural ADJ JJ Degree=Pos _ _ _ _ 9 killer killer NOUN NN Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 response response NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 18 18 NUM CD NumType=Card _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 abrogated abrogate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 7292 # text = In vivo Th1 response is also impaired. 1 In in ADP IN _ _ _ _ _ 2 vivo vivo ADV RB _ _ _ _ _ 3 Th1 th1 NUM CD NumType=Card _ _ _ _ 4 response response NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 impaired impaire VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 7293 # text = Furthermore, IL-18-induced activation of NF-kappaB and c-Jun N-terminal kinase (JNK) is blocked in MyD88-/- Th1-developing cells. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 18 18 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 Jun Jun PROPN NNP Number=Sing _ _ _ _ 17 N- N- SYM NFP _ _ _ _ SpaceAfter=No 18 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 19 kinase kinase NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 JNK JNK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 MyD88 MyD88 NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 -/- -/- PUNCT . _ _ _ _ _ 28 Th1 Th1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 -developing -develop ADJ JJ Degree=Pos _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 7294 # text = Taken together, these results demonstrate that MyD88 is a critical component in the signaling cascade that is mediated by IL-1 receptor as well as IL-18 receptor. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 MyD88 MyD88 PROPN NNP Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 critical critical ADJ JJ Degree=Pos _ _ _ _ 12 component component NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 signaling signaling NOUN NN Number=Sing _ _ _ _ 16 cascade cascade NOUN NN Number=Sing _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 receptor receptor NOUN NN Number=Sing _ _ _ _ 25 as as ADV RB _ _ _ _ _ 26 well well ADV RB Degree=Pos _ _ _ _ 27 as as ADP IN _ _ _ _ _ 28 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 18 18 NUM CD NumType=Card _ _ _ _ 31 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7295 # text = Document 0030011061 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011061 0030011061 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7296 # text = Glucocorticoid-induced apoptosis and regulation of NF-kappaB activity in human leukemic T cells. 1 Glucocorticoid Glucocorticoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 -induced -induced ADJ JJ Degree=Pos _ _ _ _ 3 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 regulation regulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7297 # text = Glucocorticoid-induced apoptosis was investigated in glucocorticoid-sensitive 6TG1.1 and resistant ICR27TK.3 human leukemic T cells. 1 Glucocorticoid Glucocorticoid PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 11 6TG1.1 6tg1.1 NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 resistant resistant NOUN NN Number=Sing _ _ _ _ 14 ICR27TK.3 ICR27TK.3 NUM CD NumType=Card _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 7298 # text = Following glucocorticoid treatment of 6TG1.1 cells, chromatin fragmentation was observed after a delay of 24 h. 1 Following follow VERB VBG VerbForm=Ger _ _ _ _ 2 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 3 treatment treatment NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 6TG1.1 6TG1.1 NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 9 fragmentation fragmentation NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 after after ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 delay delay NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 24 24 NUM CD NumType=Card _ _ _ _ 17 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 7299 # text = Fragmentation was not observed in ICR27TK.3 cells containing mutant glucocorticoid receptors (L753F) that are activation-deficient but retain the ability to repress AP-1 activity. 1 Fragmentation Fragmentation NOUN NN Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 not not PART RB _ _ _ _ _ 4 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 ICR27TK.3 ICR27TK.3 NUM CD NumType=Card _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 containing contain VERB VBG VerbForm=Ger _ _ _ _ 9 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 10 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ _ 11 receptors receptor NOUN NNS Number=Plur _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 L753 L753 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 F F PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 deficient deficient NOUN NN Number=Sing _ _ _ _ 21 but but CCONJ CC _ _ _ _ _ 22 retain retain VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 ability ability NOUN NN Number=Sing _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 repress repress VERB VB VerbForm=Inf _ _ _ _ 27 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 7300 # text = Nor was fragmentation observed after treatment with RU38486, indicating that repression of AP-1 activity is not involved. 1 Nor nor PROPN NNP Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 fragmentation fragmentation NOUN NN Number=Sing _ _ _ _ 4 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 after after ADP IN _ _ _ _ _ 6 treatment treatment NOUN NN Number=Sing _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 RU38486 RU38486 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 11 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 12 repression repression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 involved involved ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 7301 # text = As described in other systems, fragmentation required ongoing protein synthesis. 1 As as SCONJ IN _ _ _ _ _ 2 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 other other ADJ JJ Degree=Pos _ _ _ _ 5 systems system NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 fragmentation fragmentation NOUN NN Number=Sing _ _ _ _ 8 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 ongoing ongoing ADJ JJ Degree=Pos _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 synthesis synthesis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 7302 # text = However, inhibition of protein synthesis with cycloheximide anytime during the first 18 h of steroid treatment was as effective in blocking chromatin fragmentation as inhibition for the entire period, suggesting that synthesis of a component with a rapid turnover rate is required. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ _ 9 anytime anytime NOUN NN Number=Sing _ _ _ _ 10 during during ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 13 18 18 NUM CD NumType=Card _ _ _ _ 14 h h NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 steroid steroid ADJ JJ Degree=Pos _ _ _ _ 17 treatment treatment NOUN NN Number=Sing _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 as as ADV RB _ _ _ _ _ 20 effective effective ADJ JJ Degree=Pos _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 blocking block ADJ JJ Degree=Pos _ _ _ _ 23 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 24 fragmentation fragmentation NOUN NN Number=Sing _ _ _ _ 25 as as ADP IN _ _ _ _ _ 26 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 entire entire ADJ JJ Degree=Pos _ _ _ _ 30 period period NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 33 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 34 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 component component NOUN NN Number=Sing _ _ _ _ 38 with with ADP IN _ _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 41 turnover turnover NOUN NN Number=Sing _ _ _ _ 42 rate rate NOUN NN Number=Sing _ _ _ _ 43 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 44 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 7303 # text = Dexamethasone treatment completely blocked 12-O-tetradecanoylphorbol 13-acetate induction of nuclear factor-kappaB (NF-kappaB) activity and elicited an increase in the amount of immunoreactive IkappaB alpha in sensitive 6TG1.1 cells but not in resistant ICR27TK.3 cells. 1 Dexamethasone Dexamethasone ADJ JJ Degree=Pos _ _ _ _ 2 treatment treatment NOUN NN Number=Sing _ _ _ _ 3 completely completely ADV RB _ _ _ _ _ 4 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 O of ADP IN Abbr=Yes _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 tetradecanoylphorbol tetradecanoylphorbol NOUN NN Number=Sing _ _ _ _ 10 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 acetate acetate NOUN NN Number=Sing _ _ _ _ 13 induction induction NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 -kappaB -kappaB PROPN NNP Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 elicited elicit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 increase increase NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 amount amount NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 immunoreactive immunoreactive ADJ JJ Degree=Pos _ _ _ _ 33 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ _ 34 alpha alpha NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 37 6TG1.1 6TG1.1 NUM CD NumType=Card _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ _ 39 but but CCONJ CC _ _ _ _ _ 40 not not PART RB _ _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 43 ICR27TK.3 ICR27TK.3 NUM CD NumType=Card _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 7304 # text = In addition, mild detergent treatment of cell extracts indicated that a substantial amount of cytoplasmic NF-kappaB is complexed with IkappaB alpha or some other inhibitory factor. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 mild mild ADJ JJ Degree=Pos _ _ _ _ 5 detergent detergent ADJ JJ Degree=Pos _ _ _ _ 6 treatment treatment NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 extracts extract NOUN NNS Number=Plur _ _ _ _ 10 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 substantial substantial ADJ JJ Degree=Pos _ _ _ _ 14 amount amount NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 complexed complex VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 IkappaB Ikappab NOUN NN Number=Sing _ _ _ _ 24 alpha alpha NOUN NN Number=Sing _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 some some DET DT _ _ _ _ _ 27 other other ADJ JJ Degree=Pos _ _ _ _ 28 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 29 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 7305 # text = These results suggest that induction of a labile inhibitory factor such as IkappaB alpha may contribute to glucocorticoid-induced apoptosis. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 induction induction NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 labile labile NOUN NN Number=Sing _ _ _ _ 9 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 such such ADJ JJ Degree=Pos _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 IkappaB Ikappab PROPN NNP Number=Sing _ _ _ _ 14 alpha alpha PROPN NNP Number=Sing _ _ _ _ 15 may may AUX MD VerbForm=Fin _ _ _ _ 16 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 glucocorticoid glucocorticoid VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7306 # text = Document 0030011065 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011065 0030011065 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7307 # text = Transcriptional regulation of the beta-casein gene by cytokines: cross-talk between STAT5 and other signaling molecules. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 casein casein NOUN NN Number=Sing _ _ _ _ 8 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 : : PUNCT : _ _ _ _ _ 12 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 -talk -talk NOUN NN Number=Sing _ _ _ _ 14 between between ADP IN _ _ _ _ _ 15 STAT5 stat5 PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 other other ADJ JJ Degree=Pos _ _ _ _ 18 signaling signaling NOUN NN Number=Sing _ _ _ _ 19 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7308 # text = The beta-casein promoter has been widely used to monitor the activation of STAT (signal transducer and activator of transcription)5 since STAT5 was originally found as a mediator of PRL-inducible beta-casein expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 casein casein NOUN NN Number=Sing _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ _ 6 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 widely widely ADV RB _ _ _ _ _ 9 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 monitor monitor VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 STAT STAT NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 signal signal NOUN NN Number=Sing _ _ _ _ 18 transducer transducer NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 activator activator NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 5 5 NUM CD NumType=Card _ _ _ _ 25 since since ADP IN _ _ _ _ _ 26 STAT5 stat5 PROPN NNP Number=Sing _ _ _ _ 27 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 28 originally originally ADV RB _ _ _ _ _ 29 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 as as ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 mediator mediator NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 PRL PRL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 37 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 casein casein NOUN NN Number=Sing _ _ _ _ 40 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 7309 # text = However, not only is expression of the beta-casein gene regulated by STAT5 but it is also affected by other molecules such as glucocorticoid and Ras. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 not not ADV RB _ _ _ _ _ 4 only only ADV RB _ _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 casein casein NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 STAT5 STAT5 PROPN NNP Number=Sing _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 also also ADV RB _ _ _ _ _ 20 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 other other ADJ JJ Degree=Pos _ _ _ _ 23 molecules molecule NOUN NNS Number=Plur _ _ _ _ 24 such such ADJ JJ Degree=Pos _ _ _ _ 25 as as ADP IN _ _ _ _ _ 26 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 Ras Ras NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 7310 # text = In this report, we describe the transcriptional regulation of the beta-casein gene by cytokines in T cells. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 describe describe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 regulation regulation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 casein casein NOUN NN Number=Sing _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 7311 # text = We have found that the beta-casein gene is expressed in a cytotoxic T cell line, CTLL-2, in response to interleukin-2 (IL-2), which activates STAT5. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 casein casein NOUN NN Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 cytotoxic cytotoxic ADJ JJ Degree=Pos _ _ _ _ 15 T T PROPN NNP Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 CTLL CTLL NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 response response NOUN NN Number=Sing _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 interleukin interleukin VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 which which PRON WDT PronType=Rel _ _ _ _ 36 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 STAT5 stat5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 7312 # text = While IL-4 does not activate STAT5, it induces expression of STAT5-regulated genes in CTLL-2, i.e. beta-casein, a cytokine-inducible SH2-containing protein (CIS), and oncostatin M (OSM), suggesting that STAT6 activated by IL-4 substitutes for the function of STAT5 in T cells. 1 While while SCONJ IN _ _ _ _ _ 2 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - SYM SYM _ _ _ _ SpaceAfter=No 4 4 4 NUM CD NumType=Card _ _ _ _ 5 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 activate activate VERB VB VerbForm=Inf _ _ _ _ 8 STAT5 STAT5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 11 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 STAT5 STAT5 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 CTLL CTLL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 i.e. i.e. X FW _ _ _ _ _ 24 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 casein casein NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 32 SH2 Sh2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 containing containing VERB VBG VerbForm=Ger _ _ _ _ 35 protein protein NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 CIS CIS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 oncostatin oncostatin ADJ JJ Degree=Pos _ _ _ _ 42 M m NOUN NN Number=Sing _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 OSM OSM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 48 that that SCONJ IN _ _ _ _ _ 49 STAT6 Stat6 PROPN NNP Number=Sing _ _ _ _ 50 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 51 by by ADP IN _ _ _ _ _ 52 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT , _ _ _ _ SpaceAfter=No 54 4 4 NUM CD NumType=Card _ _ _ _ 55 substitutes substitute NOUN NNS Number=Plur _ _ _ _ 56 for for ADP IN _ _ _ _ _ 57 the the DET DT Definite=Def|PronType=Art _ _ _ _ 58 function function NOUN NN Number=Sing _ _ _ _ 59 of of ADP IN _ _ _ _ _ 60 STAT5 STAT5 PROPN NNP Number=Sing _ _ _ _ 61 in in ADP IN _ _ _ _ _ 62 T T PROPN NNP Number=Sing _ _ _ _ 63 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 64 . . PUNCT . _ _ _ _ _ # sent_id = 7313 # text = IL-2-induced beta-casein expression was enhanced by dexamethasone, and this synergistic effect of Dexamethasone requires the sequence between -155 and -193 in the beta-casein promoter. 1 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 casein casein NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 17 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 18 effect effect NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 Dexamethasone Dexamethasone PROPN NNP Number=Sing _ _ _ _ 21 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 sequence sequence NOUN NN Number=Sing _ _ _ _ 24 between between ADP IN _ _ _ _ _ 25 - - SYM SYM _ _ _ _ SpaceAfter=No 26 155 155 NUM CD NumType=Card _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 - - SYM SYM _ _ _ _ SpaceAfter=No 29 193 193 NUM CD NumType=Card _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 casein casein NOUN NN Number=Sing _ _ _ _ 35 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 7314 # text = Coincidentally, a deletion of this region enhanced the IL-2-induced expression of beta-casein. 1 Coincidentally Coincidentally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 deletion deletion NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 region region NOUN NN Number=Sing _ _ _ _ 8 enhanced enhance VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 casein casein NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 7315 # text = Expression of an active form of Ras, Ras(G12V), suppressed the IL-2-induced beta-casein and OSM gene expression, and the negative effect of Ras is mediated by the region between -105 and -193 in the beta-casein promoter. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 active active ADJ JJ Degree=Pos _ _ _ _ 5 form form NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Ras Ras PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 Ras Ras PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 G12 G12 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 V V NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 suppressed suppress VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 casein casein NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 OSM OSm NOUN NN Number=Sing _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 negative negative ADJ JJ Degree=Pos _ _ _ _ 33 effect effect NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 Ras Ras PROPN NNP Number=Sing _ _ _ _ 36 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 by by ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 region region NOUN NN Number=Sing _ _ _ _ 41 between between ADP IN _ _ _ _ _ 42 - - SYM SYM _ _ _ _ SpaceAfter=No 43 105 105 NUM CD NumType=Card _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 - - SYM SYM _ _ _ _ SpaceAfter=No 46 193 193 NUM CD NumType=Card _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 casein casein NOUN NN Number=Sing _ _ _ _ 52 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 7316 # text = In apparent contradiction, expression of a dominant negative form of Ras, RasN17, also inhibited IL-2-induced activation of the promoter containing the minimal beta-casein STAT5 element as well as the promoters of CIS and OSM. 1 In in ADP IN _ _ _ _ _ 2 apparent apparent ADJ JJ Degree=Pos _ _ _ _ 3 contradiction contradiction NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 9 negative negative ADJ JJ Degree=Pos _ _ _ _ 10 form form NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 Ras Ras PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 RasN RasN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 17 17 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 also also ADV RB _ _ _ _ _ 18 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ _ 28 containing contain VERB VBG VerbForm=Ger _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 31 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 casein casein NOUN NN Number=Sing _ _ _ _ 34 STAT5 stat5 NOUN NN Number=Sing _ _ _ _ 35 element element NOUN NN Number=Sing _ _ _ _ 36 as as ADV RB _ _ _ _ _ 37 well well ADV RB Degree=Pos _ _ _ _ 38 as as ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 promoters promoter NOUN NNS Number=Plur _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 CIS CIS PROPN NNP Number=Sing _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 OSM OSM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 7317 # text = In addition, Ras(G12V) complemented signaling by an erythropoietin receptor mutant defective in Ras activation and augmented the activation of the beta-casein promoter by the mutant erythropoietin receptor signaling, suggesting a possible role of Ras in Stat5-mediated gene expression. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 Ras Ras PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 G12 G12 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 V V NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 complemented complement VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 signaling signale VERB VBG VerbForm=Ger _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 erythropoietin erythropoietin ADJ JJ Degree=Pos _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 mutant mutant NOUN NN Number=Sing _ _ _ _ 16 defective defective ADJ JJ Degree=Pos _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 Ras Ras PROPN NNP Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 augmented augment VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 casein casein NOUN NN Number=Sing _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 33 erythropoietin erythropoietin NOUN NN Number=Sing _ _ _ _ 34 receptor receptor NOUN NN Number=Sing _ _ _ _ 35 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 possible possible ADJ JJ Degree=Pos _ _ _ _ 40 role role NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 Ras Ras PROPN NNP Number=Sing _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 Stat5 Stat5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 gene gene NOUN NN Number=Sing _ _ _ _ 48 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 7318 # text = These results collectively reveal a complex interaction of STAT5 with other signaling pathways and illustrate that regulation of gene expression requires integration of opposing signals. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 collectively collectively ADV RB _ _ _ _ _ 4 reveal reveal VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 complex complex ADJ JJ Degree=Pos _ _ _ _ 7 interaction interaction NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 STAT5 stat5 NUM CD NumType=Card _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 other other ADJ JJ Degree=Pos _ _ _ _ 12 signaling signaling NOUN NN Number=Sing _ _ _ _ 13 pathways pathway NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 illustrate illustrate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 16 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 17 regulation regulation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 gene gene ADJ JJ Degree=Pos _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 integration integration NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 opposing oppos ADJ JJ Degree=Pos _ _ _ _ 25 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7319 # text = Document 0030011067 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011067 0030011067 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7320 # text = Induction of transcription factors in human T lymphocytes by aspirin-like drugs. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factors factor NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 aspirin aspirin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 like like ADJ JJ Degree=Pos _ _ _ _ 13 drugs drug NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7321 # text = Aspirin-like drugs (ALD) induce calcium mobilization, an essential component of T cell activation, but do not induce the biosynthesis of IL-2. 1 Aspirin aspirin ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 like like ADP IN _ _ _ _ _ 4 drugs drug NOUN NNS Number=Plur _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 ALD ALD NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 induce induce NOUN NN Number=Sing _ _ _ _ 9 calcium calcium NOUN NN Number=Sing _ _ _ _ 10 mobilization mobilization NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 essential essential ADJ JJ Degree=Pos _ _ _ _ 14 component component NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 induce induce VERB VB VerbForm=Inf _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 biosynthesis biosynthesis NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 7322 # text = To understand the extent to which ALD may mimic mitogenic stimulation, we studied cytoplasmic and nuclear signaling steps in ALD-treated T cells. 1 To to PART TO _ _ _ _ _ 2 understand understand VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 extent extent NOUN NN Number=Sing _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 ALD ALD PROPN NNP Number=Sing _ _ _ _ 8 may may AUX MD VerbForm=Fin _ _ _ _ 9 mimic mimic ADJ JJ Degree=Pos _ _ _ _ 10 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 11 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 signaling signale VERB VBG VerbForm=Ger _ _ _ _ 19 steps step NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 ALD ALD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 7323 # text = We found that ALD induce a transient activation of protein kinase (PKC) but have no effect (in comparison to anti-CD3 antibodies) on protein tyrosine phosphorylation nor on PCL gamma 1 tyrosine phosphorylation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 ALD ALD PROPN NNP Number=Sing _ _ _ _ 5 induce induce VERB VB VerbForm=Inf _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 transient transient ADJ JJ Degree=Pos _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 PKC PKC NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 no no DET DT _ _ _ _ _ 18 effect effect NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 in in ADP IN _ _ _ _ _ 21 comparison comparison NOUN NN Number=Sing _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 24 antibodies antibody NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 protein protein NOUN NN Number=Sing _ _ _ _ 28 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 29 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 30 nor nor CCONJ CC _ _ _ _ _ 31 on on ADP IN _ _ _ _ _ 32 PCL pCl NOUN NN Number=Sing _ _ _ _ 33 gamma gamma NOUN NN Number=Sing _ _ _ _ 34 1 1 NUM CD NumType=Card _ _ _ _ 35 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 36 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 7324 # text = ALD-induced calcium mobilization and PKC activation are independent of tyrosine protein kinase activity as shown by the lack of effect of herbimycin, a tyrosine-protein kinase-specific inhibitor. 1 ALD ALd VERB VB Mood=Imp|VerbForm=Fin _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 calcium calcium NOUN NN Number=Sing _ _ _ _ 5 mobilization mobilization NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 PKC Pkc NOUN NN Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 independent independent ADJ JJ Degree=Pos _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 kinase kinase NOUN NN Number=Sing _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 as as SCONJ IN _ _ _ _ _ 17 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 lack lack NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 effect effect NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 herbimycin herbimycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 tyrosine tyrosine NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 protein protein NOUN NN Number=Sing _ _ _ _ 30 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 specific specific ADJ JJ Degree=Pos _ _ _ _ 33 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 7325 # text = Although we detected no IL-2 mRNA in ALD-treated cells, the nuclei of these cells contain proteins capable of binding to three regulatory sequences in the IL-2 promoter region: 1 Although although SCONJ IN _ _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 detected detect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 no no DET DT _ _ _ _ _ 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 ALD ALD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 nuclei nuclei NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 proteins protein NOUN NNS Number=Plur _ _ _ _ 22 capable capable ADJ JJ Degree=Pos _ _ _ _ 23 of of SCONJ IN _ _ _ _ _ 24 binding bind VERB VBG VerbForm=Ger _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 three three NUM CD NumType=Card _ _ _ _ 27 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 28 sequences sequence NOUN NNS Number=Plur _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 2 2 NUM CD NumType=Card _ _ _ _ 34 promoter promoter NOUN NN Number=Sing _ _ _ _ 35 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 : : PUNCT : _ _ _ _ _ # sent_id = 7326 # text = NFAT, NF kappa B, and AP-1. 1 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ _ 4 kappa kappa PROPN NNP Number=Sing _ _ _ _ 5 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 7327 # text = These binding activities are expressed only in activated T cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 binding binding ADJ JJ Degree=Pos _ _ _ _ 3 activities activity NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 only only ADV RB _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 7328 # text = The expression of AP-1 depended on calcium mobilization and PKC activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 depended depend VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 calcium calcium NOUN NN Number=Sing _ _ _ _ 10 mobilization mobilization NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 PKC Pkc NOUN NN Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 7329 # text = These data suggest that ALD cause transient but significant changes in T cell transmembrane signaling, although some events induced by stimulation with anti-CD3 antibodies are not induced by ALD. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 ALD Ald AUX MD VerbForm=Fin _ _ _ _ 6 cause cause VERB VB VerbForm=Inf _ _ _ _ 7 transient transient ADJ JJ Degree=Pos _ _ _ _ 8 but but CCONJ CC _ _ _ _ _ 9 significant significant ADJ JJ Degree=Pos _ _ _ _ 10 changes change NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 transmembrane transmembrane NOUN NN Number=Sing _ _ _ _ 15 signaling signaling VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 although although SCONJ IN _ _ _ _ _ 18 some some DET DT _ _ _ _ _ 19 events event NOUN NNS Number=Plur _ _ _ _ 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 25 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 26 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 not not PART RB _ _ _ _ _ 28 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 ALD ALD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 7330 # text = The signal is transmitted to the nucleus and induces DNA-binding activity by several transcription factors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 signal signal NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 transmitted transmit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 induces induce NOUN NNS Number=Plur _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 binding bind VERB VBG VerbForm=Ger _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 several several ADJ JJ Degree=Pos _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 7331 # text = However, the ALD stimulus is not capable of causing complete T cell activation. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 ALD Ald ADJ JJ Degree=Pos _ _ _ _ 5 stimulus stimulus NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 capable capable ADJ JJ Degree=Pos _ _ _ _ 9 of of SCONJ IN _ _ _ _ _ 10 causing cause VERB VBG VerbForm=Ger _ _ _ _ 11 complete complete ADJ JJ Degree=Pos _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7332 # text = Document 0030011069 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011069 0030011069 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7333 # text = Comparison of the transactivation domains of Stat5 and Stat6 in lymphoid cells and mammary epithelial cells. 1 Comparison Comparison NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 5 domains domain NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Stat5 stat5 PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 Stat6 stat6 PROPN NNP Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 mammary mammary ADJ JJ Degree=Pos _ _ _ _ 15 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7334 # text = Stat (signal transducers and activators of transcription) and Jak (Janus kinases) proteins are central components in the signal transduction events in hematopoietic and epithelial cells. 1 Stat Stat PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 signal signal VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 transducers transducer NOUN NNS Number=Plur _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 activators activator NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 Jak Jak PROPN NNP Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 Janus Janus PROPN NNP Number=Sing _ _ _ _ 14 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 proteins protein NOUN NNS Number=Plur _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 central central ADJ JJ Degree=Pos _ _ _ _ 19 components component NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 signal signal NOUN NN Number=Sing _ _ _ _ 23 transduction transduction NOUN NN Number=Sing _ _ _ _ 24 events event NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 7335 # text = They are rapidly activated by various cytokines, hormones, and growth factors. 1 They they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 rapidly rapidly ADV RB _ _ _ _ _ 4 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 various various ADJ JJ Degree=Pos _ _ _ _ 7 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 hormones hormone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 growth growth NOUN NN Number=Sing _ _ _ _ 13 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 7336 # text = Upon ligand binding and cytokine receptor dimerization, 1 Upon upon ADP IN _ _ _ _ _ 2 ligand ligand NOUN NN Number=Sing _ _ _ _ 3 binding binding NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 dimerization dimerization NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ # sent_id = 7337 # text = Stat proteins are phosphorylated on tyrosine residues by Jak kinases. 1 Stat Stat NOUN NN Number=Sing _ _ _ _ 2 proteins protein NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 7 residues residue NOUN NNS Number=Plur _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 Jak Jak PROPN NNP Number=Sing _ _ _ _ 10 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 7338 # text = Activated 1 Activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ # sent_id = 7339 # text = Stat proteins form homo- or heterodimers, translocate to the nucleus, and induce transcription from responsive genes. 1 Stat Stat PROPN NNP Number=Sing _ _ _ _ 2 proteins protein VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 form form NOUN NN Number=Sing _ _ _ _ 4 homo homo NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 translocate translocate VERB VB VerbForm=Inf _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 induce induce ADJ JJ Degree=Pos _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 19 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 7340 # text = Stat5 and Stat6 are transcription factors active in mammary epithelial cells and immune cells. 1 Stat5 stat5 PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 Stat6 stat6 PROPN NNP Number=Sing _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factors factor NOUN NNS Number=Plur _ _ _ _ 7 active active ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 mammary mammary ADJ JJ Degree=Pos _ _ _ _ 10 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 immune immune ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 7341 # text = Prolactin activates Stat5, and interleukin-4 (IL-4) activates Stat6. 1 Prolactin Prolactin PROPN NNP Number=Sing _ _ _ _ 2 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 Stat5 Stat5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 4 4 NUM CD NumType=Card _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 Stat6 stat6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 7342 # text = Both cytokines are able to stimulate cell proliferation, differentiation, and survival. 1 Both both DET DT _ _ _ _ _ 2 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 able able ADJ JJ Degree=Pos _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 survival survival NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 7343 # text = We investigated the transactivation potential of Stat6 and found that it is not restricted to lymphocytes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 5 potential potential NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Stat6 stat6 PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 restricted restrict VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 7344 # text = IL-4-dependent activation of Stat6 was also observed in HC11 mammary epithelial cells. 1 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Stat6 stat6 PROPN NNP Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 also also ADV RB _ _ _ _ _ 11 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 HC11 HC11 NUM CD NumType=Card _ _ _ _ 14 mammary mammary ADJ JJ Degree=Pos _ _ _ _ 15 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 7345 # text = In these cells, Stat6 activation led to the induction of the beta-casein gene promoter. 1 In in ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 Stat6 Stat6 NUM CD NumType=Card _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 casein casein NOUN NN Number=Sing _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 7346 # text = The induction of this promoter was confirmed in COS7 cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 confirmed confirm VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 COS7 COS7 NUM CD NumType=Card _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 7347 # text = The glucocorticoid receptor was able to further enhance IL-4-induced gene transcription through the action of Stat6. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 3 receptor receptor NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 able able ADJ JJ Degree=Pos _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 further further VERB VB VerbForm=Inf _ _ _ _ 8 enhance enhance NOUN NN Number=Sing _ _ _ _ 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 through through ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 action action NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 Stat6 stat6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 7348 # text = Deletion analysis of the carboxyl-terminal region of Stat6 and recombination of this region with a heterologous DNA binding domain allowed the delimitation and characterization of the transactivation domain of Stat6. 1 Deletion Deletion NOUN NN Number=Sing _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 carboxyl carboxyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 terminal terminal NOUN NN Number=Sing _ _ _ _ 8 region region NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 Stat6 stat6 NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 recombination recombination NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 15 region region NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 19 DNA dna NOUN NN Number=Sing _ _ _ _ 20 binding binding VERB VBG VerbForm=Ger _ _ _ _ 21 domain domain NOUN NN Number=Sing _ _ _ _ 22 allowed allow VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 delimitation delimitation NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 characterization characterization NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 30 domain domain NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 Stat6 Stat6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 7349 # text = The potencies of the transactivation domains of Stat5, Stat6, and viral protein VP16 were compared. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 potencies potency NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 6 domains domain NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Stat5 Stat5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 Stat6 stat6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 viral viral ADJ JJ Degree=Pos _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 VP vp NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 16 16 NUM CD NumType=Card _ _ _ _ 17 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 compared compare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 7350 # text = Stat6 had a transactivation domain which was about 10-fold stronger than that of Stat5. 1 Stat6 stat6 PROPN NNP Number=Sing _ _ _ _ 2 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 5 domain domain NOUN NN Number=Sing _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 about about ADP IN _ _ _ _ _ 9 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 fold fold VERB VB VerbForm=Inf _ _ _ _ 12 stronger stronger ADJ JJR Degree=Cmp _ _ _ _ 13 than than ADP IN _ _ _ _ _ 14 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 Stat5 Stat5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 7351 # text = In pre-B cells (Ba/F3), the transactivation domain of Stat6 was IL-4 regulated, independently from its DNA binding function. 1 In in ADP IN _ _ _ _ _ 2 pre pre X AFX _ _ _ _ SpaceAfter=No 3 -B -b ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 Ba/ Ba/ SYM NFP _ _ _ _ SpaceAfter=No 7 F3 F3 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 12 domain domain NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 Stat6 stat6 PROPN NNP Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 4 4 NUM CD NumType=Card _ _ _ _ 19 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 independently independently ADV RB _ _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 DNA dna NOUN NN Number=Sing _ _ _ _ 25 binding binding VERB VBG VerbForm=Ger _ _ _ _ 26 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7352 # text = Document 0030011070 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011070 0030011070 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7353 # text = Induction of activator protein (AP)-1 and nuclear factor-kappaB by CD28 stimulation involves both phosphatidylinositol 3-kinase and acidic sphingomyelinase signals. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 activator activator NOUN NN Number=Sing _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 - - PUNCT : _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 CD28 CD28 NUM CD NumType=Card _ _ _ _ 17 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 18 involves involf VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 both both DET DT _ _ _ _ _ 20 phosphatidylinositol phosphatidylinositol NOUN NN Number=Sing _ _ _ _ 21 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kinase kinase NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 acidic acidic ADJ JJ Degree=Pos _ _ _ _ 26 sphingomyelinase sphingomyelinase NOUN NN Number=Sing _ _ _ _ 27 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7354 # text = A major obstacle in understanding the signaling events that follow CD28 receptor ligation arises from the fact that CD28 acts as a costimulus to TCR engagement, making it difficult to assess the relative contribution of CD28 signals as distinct from those of the TCR. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 major major ADJ JJ Degree=Pos _ _ _ _ 3 obstacle obstacle NOUN NN Number=Sing _ _ _ _ 4 in in SCONJ IN _ _ _ _ _ 5 understanding understande VERB VBG VerbForm=Ger _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 signaling signal NOUN NN Number=Sing _ _ _ _ 8 events event NOUN NNS Number=Plur _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 follow follow VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 CD28 CD28 NUM CD NumType=Card _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 ligation ligation NOUN NN Number=Sing _ _ _ _ 14 arises arise NOUN NNS Number=Plur _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 fact fact NOUN NN Number=Sing _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 20 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 as as ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 costimulus costimulus NOUN NN Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 TCR Tcr VERB VB VerbForm=Inf _ _ _ _ 26 engagement engagement NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 making make VERB VBG VerbForm=Ger _ _ _ _ 29 it it PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 30 difficult difficult ADJ JJ Degree=Pos _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 assess assess VERB VB VerbForm=Inf _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 relative relative ADJ JJ Degree=Pos _ _ _ _ 35 contribution contribution NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 CD28 CD28 NUM CD NumType=Card _ _ _ _ 38 signals signal NOUN NNS Number=Plur _ _ _ _ 39 as as ADV RB _ _ _ _ _ 40 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 41 from from ADP IN _ _ _ _ _ 42 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 TCR Tcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 7355 # text = To overcome this problem, we have exploited the observation that activated human T cell blasts can be stimulated via the CD28 surface molecule in the absence of antigenic challenge; thus, we have been able to observe the response of normal T cells to CD28 activation in isolation. 1 To to PART TO _ _ _ _ _ 2 overcome overcome VERB VB VerbForm=Inf _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 problem problem NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 exploited exploite VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 observation observation NOUN NN Number=Sing _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 blasts blast NOUN NNS Number=Plur _ _ _ _ 17 can can AUX MD VerbForm=Fin _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 via via ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 CD28 CD28 NOUN NN Number=Sing _ _ _ _ 23 surface surface NOUN NN Number=Sing _ _ _ _ 24 molecule molecule NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 absence absence NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 antigenic antigenic ADJ JJ Degree=Pos _ _ _ _ 30 challenge challenge NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ; ; PUNCT , _ _ _ _ _ 32 thus thus ADV RB _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 35 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 36 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 37 able able ADJ JJ Degree=Pos _ _ _ _ 38 to to PART TO _ _ _ _ _ 39 observe observe VERB VB VerbForm=Inf _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 response response NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 normal normal ADJ JJ Degree=Pos _ _ _ _ 44 T t PROPN NNP Number=Sing _ _ _ _ 45 cells cell NOUN NNS Number=Plur _ _ _ _ 46 to to ADP IN _ _ _ _ _ 47 CD28 CD28 NUM CD NumType=Card _ _ _ _ 48 activation activation NOUN NN Number=Sing _ _ _ _ 49 in in ADP IN _ _ _ _ _ 50 isolation isolation NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 7356 # text = Using this system, we observed that CD28 stimulation by B7-transfected CHO cells induced a proliferative response in T cells that was not accompanied by measurable IL-2 production. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 9 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 B7 B7 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 CHO cho PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 that that PRON WDT PronType=Rel _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 not not PART RB _ _ _ _ _ 26 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 measurable measurable ADJ JJ Degree=Pos _ _ _ _ 29 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ _ 32 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 7357 # text = However, subsequent analysis of transcription factor generation revealed that B7 stimulation induced both activator protein-1 (AP-1) and nuclear factor-kappaB (NF-kappaB) complexes, but not NF-AT. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 generation generation NOUN NN Number=Sing _ _ _ _ 9 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 B7 B7 NUM CD NumType=Card _ _ _ _ 12 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 both both DET DT _ _ _ _ _ 15 activator activator NOUN NN Number=Sing _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 X LS _ _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 -kappaB -kappaB PROPN NNP Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 complexes complexe NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 but but CCONJ CC _ _ _ _ _ 36 not not ADV RB _ _ _ _ _ 37 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 AT at PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 7358 # text = In contrast, engagement of the TCR by class II MHC/superantigen, either with or without CD28 ligation, resulted in the induction of NF-AT, AP-1, and NF-kappaB as well as IL-2 production. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 engagement engagement NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 TCR Tcr NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 class class NOUN NN Number=Sing _ _ _ _ 10 II ii PROPN NNP Number=Sing _ _ _ _ 11 MHC MHC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 superantigen superantigen ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 either either CCONJ CC _ _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 without without ADP IN _ _ _ _ _ 19 CD28 CD28 NUM CD NumType=Card _ _ _ _ 20 ligation ligation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 induction induction NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 AT at PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 39 as as ADV RB _ _ _ _ _ 40 well well ADV RB Degree=Pos _ _ _ _ 41 as as ADP IN _ _ _ _ _ 42 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 2 2 NUM CD NumType=Card _ _ _ _ 45 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 7359 # text = Using selective inhibitors, we investigated the signaling pathways involved in the CD28-mediated induction of AP-1 and NF-kappaB. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 selective selective ADJ JJ Degree=Pos _ _ _ _ 3 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 signaling signaling NOUN NN Number=Sing _ _ _ _ 9 pathways pathway NOUN NNS Number=Plur _ _ _ _ 10 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 CD28 CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 -mediated -mediated VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 induction induction NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 7360 # text = This revealed that NF-kappaB generation was sensitive to chloroquine, an inhibitor of acidic sphingomyelinase, but not to the phosphatidylinositol 3-kinase inhibitor, wortmannin. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 generation generation NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 chloroquine chloroquine VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 acidic acidic ADJ JJ Degree=Pos _ _ _ _ 17 sphingomyelinase sphingomyelinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 not not ADV RB _ _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 phosphatidylinositol phosphatidylinositol NOUN NN Number=Sing _ _ _ _ 24 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kinase kinase NOUN NN Number=Sing _ _ _ _ 27 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 wortmannin wortmannin NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 7361 # text = In contrast, AP-1 generation was inhibited by wortmannin and was also variably sensitive to chloroquine. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 generation generation NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 wortmannin wortmannin NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 variably variably ADV RB _ _ _ _ _ 16 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 chloroquine chloroquine VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 7362 # text = These data suggest that in activated normal T cells, CD28-derived signals can stimulate proliferation at least in part via NF-kappaB and AP-1 generation, and that this response uses both acidic sphingomyelinase and phosphatidylinositol 3-kinase-linked pathways. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 normal normal ADJ JJ Degree=Pos _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 CD28 CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 signals signal NOUN NNS Number=Plur _ _ _ _ 15 can can AUX MD VerbForm=Fin _ _ _ _ 16 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 17 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 18 at at ADV RB _ _ _ _ _ 19 least least ADV RBS Degree=Sup _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 part part NOUN NN Number=Sing _ _ _ _ 22 via via ADP IN _ _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 generation generation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 that that SCONJ IN _ _ _ _ _ 34 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 35 response response NOUN NN Number=Sing _ _ _ _ 36 uses use VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 both both DET DT _ _ _ _ _ 38 acidic acidic ADJ JJ Degree=Pos _ _ _ _ 39 sphingomyelinase sphingomyelinase NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 phosphatidylinositol phosphatidylinositol NOUN NN Number=Sing _ _ _ _ 42 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7363 # text = Document 0030011072 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011072 0030011072 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7364 # text = Different sequence requirements for expression in erythroid and megakaryocytic cells within a regulatory element upstream of the GATA-1 gene. 1 Different different ADJ JJ Degree=Pos _ _ _ _ 2 sequence sequence NOUN NN Number=Sing _ _ _ _ 3 requirements requirement NOUN NNS Number=Plur _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 within within ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 14 element element NOUN NN Number=Sing _ _ _ _ 15 upstream upstream NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7365 # text = The lineage-restricted transcription factor GATA-1 is required for differentiation of erythroid and megakaryocytic cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 GATA GATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 7366 # text = We have localized a 317 base pair cis-acting regulatory element, HS I, associated with a hematopoietic-specific 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 localized localize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 317 317 NUM CD NumType=Card _ _ _ _ 6 base base NOUN NN Number=Sing _ _ _ _ 7 pair pair NOUN NN Number=Sing _ _ _ _ 8 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 acting act VERB VBG VerbForm=Ger _ _ _ _ 11 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 HS HS VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 specific specific ADJ JJ Degree=Pos _ _ _ _ # sent_id = 7367 # text = DNase I hypersensitive site, which lies approx. 1 DNase DNase INTJ UH _ _ _ _ _ 2 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 3 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 4 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 lies lie VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 approx approx NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 7368 # text = 3.7 kilobases upstream of the murine hematopoietic-specific GATA-1 IE promoter. 1 3.7 3.7 NUM CD NumType=Card _ _ _ _ 2 kilobases kilobase NOUN NNS Number=Plur _ _ _ _ 3 upstream upstream NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 murine murine NOUN NN Number=Sing _ _ _ _ 7 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 IE ie NOUN NN Number=Sing _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 7369 # text = HS I directs high-level expression of reporter GATA-1/lacZ genes to primitive and definitive erythroid cells and megakaryocytes in transgenic mice. 1 HS h VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 2 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 3 directs direct VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 level level NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 reporter reporter NOUN NN Number=Sing _ _ _ _ 10 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 14 lacZ lacz NOUN NN Number=Sing _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 primitive primitive ADJ JJ Degree=Pos _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 definitive definitive ADJ JJ Degree=Pos _ _ _ _ 20 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 megakaryocytes megakaryocyte NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 26 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 7370 # text = Comparative sequence analysis of HS I between human and mouse shows approx. 1 Comparative Comparative ADJ JJ Degree=Pos _ _ _ _ 2 sequence sequence NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 HS HS PROPN NNP Number=Sing _ _ _ _ 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 between between ADP IN _ _ _ _ _ 8 human human NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 mouse mouse NOUN NN Number=Sing _ _ _ _ 11 shows show NOUN NNS Number=Plur _ _ _ _ 12 approx approx NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 7371 # text = 63% nucleotide identity with a more conserved core of 169 base pairs (86% identity). 1 63 63 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 % % SYM NN Number=Sing _ _ _ _ 3 nucleotide nucleotide ADJ JJ Degree=Pos _ _ _ _ 4 identity identity NOUN NN Number=Sing _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 more more ADV RBR _ _ _ _ _ 8 conserved conserved ADJ JJ Degree=Pos _ _ _ _ 9 core core NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 169 169 NUM CD NumType=Card _ _ _ _ 12 base base NOUN NN Number=Sing _ _ _ _ 13 pairs pair NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 86 86 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 % % SYM NN Number=Sing _ _ _ _ 17 identity identity NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 7372 # text = This core contains a GATA site separated by 10 base pairs from an E-box motif. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 core core NOUN NN Number=Sing _ _ _ _ 3 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 GATA GATa PROPN NNP Number=Sing _ _ _ _ 6 site site NOUN NN Number=Sing _ _ _ _ 7 separated separate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 10 10 NUM CD NumType=Card _ _ _ _ 10 base base NOUN NN Number=Sing _ _ _ _ 11 pairs pair NOUN NNS Number=Plur _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 box box NOUN NN Number=Sing _ _ _ _ 16 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 7373 # text = The composite motif binds a multi-protein hematopoietic-specific transcription factor complex which includes GATA-1, SCL/tal-1, E2A, Lmo2 and Ldb-1. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 composite composite ADJ JJ Degree=Pos _ _ _ _ 3 motif motif NOUN NN Number=Sing _ _ _ _ 4 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 multi-protein multi-protein ADJ JJ Degree=Pos _ _ _ _ 7 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 complex complex NOUN NN Number=Sing _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 includes include VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 SCL Scl NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 tal tal NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 E2A E2a NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 Lmo2 Lmo2 NUM CD NumType=Card _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 Ldb Ldb NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 7374 # text = Point mutations of the GATA site abolishes HS I function, whereas mutation of the E-box motif still allows reporter gene expression in both lineages. 1 Point point ADJ JJ Degree=Pos _ _ _ _ 2 mutations mutation NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 GATA GATA PROPN NNP Number=Sing _ _ _ _ 6 site site NOUN NN Number=Sing _ _ _ _ 7 abolishes abolish VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 HS H VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 whereas whereas SCONJ IN _ _ _ _ _ 13 mutation mutation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 box box NOUN NN Number=Sing _ _ _ _ 18 motif motif NOUN NN Number=Sing _ _ _ _ 19 still still ADV RB _ _ _ _ _ 20 allows allow VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 reporter reporter NOUN NN Number=Sing _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 both both DET DT _ _ _ _ _ 26 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 7375 # text = Strict dependence of HS I activity on a GATA site implies that assembly of a protein complex containing a GATA-factor, presumably GATA-1 or GATA-2, is critical to activating or maintaining its function. 1 Strict strict ADJ JJ Degree=Pos _ _ _ _ 2 dependence dependence NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 HS HS PROPN NNP Number=Sing _ _ _ _ 5 I i PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 GATA GATA PROPN NNP Number=Sing _ _ _ _ 10 site site NOUN NN Number=Sing _ _ _ _ 11 implies imply VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 13 assembly assembly NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 complex complex NOUN NN Number=Sing _ _ _ _ 18 containing contain VERB VBG VerbForm=Ger _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 presumably presumably ADV RB _ _ _ _ _ 25 GATA GATA NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 critical critical ADJ JJ Degree=Pos _ _ _ _ 35 to to SCONJ IN _ _ _ _ _ 36 activating activat VERB VBG VerbForm=Ger _ _ _ _ 37 or or CCONJ CC _ _ _ _ _ 38 maintaining maintain VERB VBG VerbForm=Ger _ _ _ _ 39 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 40 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 7376 # text = Further dissection of the 317 base pair region demonstrates that, whereas all 317 base pairs are required for expression in megakaryocytes, only the 5' 62 base pairs are needed for erythroid-specific reporter expression. 1 Further further ADJ JJ Degree=Pos _ _ _ _ 2 dissection dissection NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 317 317 NUM CD NumType=Card _ _ _ _ 6 base base NOUN NN Number=Sing _ _ _ _ 7 pair pair NOUN NN Number=Sing _ _ _ _ 8 region region NOUN NN Number=Sing _ _ _ _ 9 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 whereas whereas ADV RB _ _ _ _ _ 13 all all DET DT _ _ _ _ _ 14 317 317 NUM CD NumType=Card _ _ _ _ 15 base base NOUN NN Number=Sing _ _ _ _ 16 pairs pair NOUN NNS Number=Plur _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 megakaryocytes megakaryocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 only only ADV RB _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ' ' PUNCT `` _ _ _ _ _ 28 62 62 NUM CD NumType=Card _ _ _ _ 29 base base NOUN NN Number=Sing _ _ _ _ 30 pairs pair NOUN NNS Number=Plur _ _ _ _ 31 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 32 needed need VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 for for ADP IN _ _ _ _ _ 34 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 specific specific ADJ JJ Degree=Pos _ _ _ _ 37 reporter reporter NOUN NN Number=Sing _ _ _ _ 38 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 7377 # text = These findings demonstrate differential lineage requirements for expression within the HS I element. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 differential differential ADJ JJ Degree=Pos _ _ _ _ 5 lineage lineage NOUN NN Number=Sing _ _ _ _ 6 requirements requirement NOUN NNS Number=Plur _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 within within ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 HS H PROPN NNPS Number=Plur _ _ _ _ 12 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 13 element element VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7378 # text = Document 0030011074 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011074 0030011074 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7379 # text = Rescue by cytokines of apoptotic cell death induced by IL-2 deprivation of human antigen-specific 1 Rescue rescue VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 by by ADP IN _ _ _ _ _ 3 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 death death NOUN NN Number=Sing _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 deprivation deprivation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 antigen-specific antigen-specific ADJ JJ Degree=Pos _ _ _ _ # sent_id = 7380 # text = T cell clones. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7381 # text = The control of cell survival and cell death is of central importance in tissues with high cell turnover such as the lymphoid system. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 control control NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 survival survival NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 death death NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 central central ADJ JJ Degree=Pos _ _ _ _ 12 importance importance NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 tissues tissue NOUN NNS Number=Plur _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 high high ADJ JJ Degree=Pos _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 turnover turnover NOUN NN Number=Sing _ _ _ _ 19 such such ADJ JJ Degree=Pos _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 23 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 7382 # text = We have examined the effect of cytokines on IL-2 deprivation-induced apoptosis of human antigen-specific T helper clones with different cytokine production profiles. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 deprivation deprivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 antigen-specific antigen-specific ADJ JJ Degree=Pos _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 helper helper NOUN NN Number=Sing _ _ _ _ 21 clones clone NOUN NNS Number=Plur _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 different different ADJ JJ Degree=Pos _ _ _ _ 24 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 25 production production NOUN NN Number=Sing _ _ _ _ 26 profiles profile NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 7383 # text = We found that IL-2, interferon-alpha (IFN-alpha), and IFN-beta inhibited IL-2 deprivation apoptosis in Th0, Th1, and Th2 clones. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 IFN IFN ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 beta beta NOUN NN Number=Sing _ _ _ _ 21 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 deprivation deprivation NOUN NN Number=Sing _ _ _ _ 26 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 Th0 Th0 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 Th1 Th1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 Th2 Th2 NUM CD NumType=Card _ _ _ _ 34 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 7384 # text = We also found that IL-2 protects T cell clones from IL-2 deprivation apoptosis accompanying active proliferation and enhanced expression of P53, Rb and Bcl-xL proteins. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 protects protect NOUN NNS Number=Plur _ _ _ _ 9 T t NUM CD NumType=Card _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 clones clone NOUN NNS Number=Plur _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 deprivation deprivation NOUN NN Number=Sing _ _ _ _ 17 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 18 accompanying accompany VERB VBG VerbForm=Ger _ _ _ _ 19 active active ADJ JJ Degree=Pos _ _ _ _ 20 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 P53 P53 NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 Rb Rb PROPN NNP Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 xL xL PROPN NNP Number=Sing _ _ _ _ 32 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 7385 # text = In contrast, IFN-alpha/beta rescued T cell clones from apoptosis without active proliferation, and expression of apoptosis-associated proteins tested so far was unaffected. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 IFN Ifn ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 beta beta NOUN NN Number=Sing _ _ _ _ 9 rescued rescue VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 clones clone NOUN NNS Number=Plur _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 15 without without ADP IN _ _ _ _ _ 16 active active ADJ JJ Degree=Pos _ _ _ _ 17 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 proteins protein NOUN NNS Number=Plur _ _ _ _ 26 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 so so ADV RB _ _ _ _ _ 28 far far ADV RB Degree=Pos _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 unaffected unaffected ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 7386 # text = This may be due to the fact that T cells treated with IL-2 contained those located in S + G2/M phases of the cell cycle, whereas the vast majority of T cells treated with IFN-alpha/beta were located in G0/G1 phase. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 may may AUX MD VerbForm=Fin _ _ _ _ 3 be be AUX VB VerbForm=Inf _ _ _ _ 4 due due ADP IN _ _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 fact fact NOUN NN Number=Sing _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 18 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 S s PROPN NNP Number=Sing _ _ _ _ 21 + + SYM SYM _ _ _ _ _ 22 G2/ G2/ SYM NFP _ _ _ _ SpaceAfter=No 23 M m NOUN NN Number=Sing _ _ _ _ 24 phases phasis NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 whereas whereas SCONJ IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 vast vast ADJ JJ Degree=Pos _ _ _ _ 33 majority majority NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 T t PROPN NNP Number=Sing _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ _ 37 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 with with ADP IN _ _ _ _ _ 39 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 alpha/ alphaith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 42 beta beta NOUN NN Number=Sing _ _ _ _ 43 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 44 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 G0/G1 G0/G1 NUM CD NumType=Card _ _ _ _ 47 phase phase NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 7387 # text = IFN-alpha/beta specifically induced tyrosine phosphorylation and translocation into nucleus of signal transducers and activators of transcription (STAT) 2 protein in the T cell clones. 1 IFN-alpha/ IFN-alpha/ SYM NFP _ _ _ _ SpaceAfter=No 2 beta beof NOUN NN Number=Sing _ _ _ _ 3 specifically specifically ADV RB _ _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 6 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 translocation translocation NOUN NN Number=Sing _ _ _ _ 9 into into ADP IN _ _ _ _ _ 10 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 signal signal ADJ JJ Degree=Pos _ _ _ _ 13 transducers transducer NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 activators activator NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 STAT STAT NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 2 2 NUM CD NumType=Card _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 T T PROPN NNP Number=Sing _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 7388 # text = In addition, over-expression of STAT2 by transfection of the cDNA prevented apoptosis of the T cell clones. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 over over ADP IN _ _ _ _ SpaceAfter=No 5 -expression -expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 STAT2 STAT2 NUM CD NumType=Card _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 transfection transfection NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 cDNA cDNA PROPN NNP Number=Sing _ _ _ _ 13 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 T T PROPN NNP Number=Sing _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 7389 # text = Our present study shows that IFN-alpha and -beta mediate anti-apoptotic effect through other pathways than that of IL-2 in growth factor deprivation apoptosis. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 shows show VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 alpha alpha NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 beta beta ADP IN Abbr=Yes _ _ _ _ 12 mediate mediate ADJ JJ Degree=Pos _ _ _ _ 13 anti-apoptotic anti-apoptotic ADJ JJ Degree=Pos _ _ _ _ 14 effect effect NOUN NN Number=Sing _ _ _ _ 15 through through ADP IN _ _ _ _ _ 16 other other ADJ JJ Degree=Pos _ _ _ _ 17 pathways pathway NOUN NNS Number=Plur _ _ _ _ 18 than than ADP IN _ _ _ _ _ 19 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 growth growth NOUN NN Number=Sing _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ _ 27 deprivation deprivation NOUN NN Number=Sing _ _ _ _ 28 apoptosis apoptosis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7390 # text = Document 0030011081 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011081 0030011081 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7391 # text = Anti-rheumatic compound aurothioglucose inhibits tumor necrosis factor-alpha-induced HIV-1 replication in latently infected OM10.1 and Ach2 cells. 1 Anti-rheumatic Anti-rheumatic ADJ JJ Degree=Pos _ _ _ _ 2 compound compound NOUN NN Number=Sing _ _ _ _ 3 aurothioglucose aurothioglucose DET DT Number=Plur|PronType=Dem _ _ _ _ 4 inhibits inhibits NOUN NNS Number=Plur _ _ _ _ 5 tumor tumor NOUN NN Number=Sing _ _ _ _ 6 necrosis necrosis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 7 factor-alpha-induced factor-alpha-induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 replication replication NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 latently latently ADV RB _ _ _ _ _ 14 infected infect ADJ JJ Degree=Pos _ _ _ _ 15 OM Om ADP IN _ _ _ _ SpaceAfter=No 16 10.1 10.1 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 Ach2 Ach2 NUM CD NumType=Card _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7392 # text = NF-kappaB is a potent cellular activator of HIV-1 gene expression. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 potent potent NOUN NN Number=Sing _ _ _ _ 7 cellular celular ADJ JJ Degree=Pos _ _ _ _ 8 activator activator NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 7393 # text = Down-regulation of NF-kappaB activation is known to inhibit HIV replication from the latently infected cells. 1 Down down ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 regulation regulation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 13 HIV HIV PROPN NNP Number=Sing _ _ _ _ 14 replication replication NOUN NN Number=Sing _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 latently latently ADV RB Degree=Pos _ _ _ _ 18 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 7394 # text = Gold compounds have been effectively used for many decades in the treatment of rheumatoid arthritis. 1 Gold gold NOUN NN Number=Sing _ _ _ _ 2 compounds compound NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 effectively effectively ADV RB _ _ _ _ _ 6 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 many many ADJ JJ Degree=Pos _ _ _ _ 9 decades decade NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 treatment treatment NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 rheumatoid rheumatoid ADJ JJ Degree=Pos _ _ _ _ 15 arthritis arthritis NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 7395 # text = We previously reported that gold compounds, especially aurothioglucose (AuTG) containing monovalent gold ion, inhibited the DNA-binding of NF-kappaB in vitro. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 previously previously ADV RB _ _ _ _ _ 3 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 gold gold ADJ JJ Degree=Pos _ _ _ _ 6 compounds compound NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 especially especially ADV RB _ _ _ _ _ 9 aurothioglucose aurothioglucose NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 AuTG AuTG NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 containing contain VERB VBG VerbForm=Ger _ _ _ _ 14 monovalent monovalent ADJ JJ Degree=Pos _ _ _ _ 15 gold gold NOUN NN Number=Sing _ _ _ _ 16 ion ion NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 binding binding VERB VBG VerbForm=Ger _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 vitro vitro PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 7396 # text = In this report we have examined the efficacy of the gold compound AuTG as an inhibitor of HIV replication in latently infected OM10.1 and Ach2 cells. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 efficacy efficacy NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 gold gold ADJ JJ Degree=Pos _ _ _ _ 12 compound compound NOUN NN Number=Sing _ _ _ _ 13 AuTG Autg NOUN NN Number=Sing _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 HIV HIV PROPN NNP Number=Sing _ _ _ _ 19 replication replication NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 latently latently ADV RB _ _ _ _ _ 22 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 OM10.1 Om10.1 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 Ach2 ach2 NUM CD NumType=Card _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 7397 # text = Tumor necrosis factor (TNF)-alpha-induced HIV-1 replication in OM10.1 or Ach2 cells was significantly inhibited by non-cytotoxic doses of AuTG (>10 microM in OM10.1 cells and >25 F.M in Ach2 cells), while 25 microM of the counter-anion thioglucose (TG) or gold compound containing divalent gold ion, HAuCl3, had no effect. 1 Tumor tumor ADP IN _ _ _ _ _ 2 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 replication replication NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 OM10.1 OM10.1 NUM CD NumType=Card _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 Ach2 Ach2 NUM CD NumType=Card _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 significantly significantly ADV RB _ _ _ _ _ 22 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 non-cytotoxic non-cytotoxic ADJ JJ Degree=Pos _ _ _ _ 25 doses dos NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 AuTG AuTG PROPN NNP Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 >10 >10 NUM CD NumType=Card _ _ _ _ 30 microM microm NUM CD NumType=Card _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 OM Om NUM CD NumType=Card _ _ _ SpaceAfter=No 33 10.1 10.1 NUM CD NumType=Card _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 > > PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 25 25 NUM CD NumType=Card _ _ _ _ 38 F. F. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 M m NOUN NN Number=Sing _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 Ach2 Ach2 NUM CD NumType=Card _ _ _ _ 42 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 while while SCONJ IN _ _ _ _ _ 46 25 25 NUM CD NumType=Card _ _ _ _ 47 microM microm NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 counter-anion counter-anion NOUN NN Number=Sing _ _ _ _ 51 thioglucose thioglucose NOUN NN Number=Sing _ _ _ _ 52 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 53 TG TG NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 ) ) PUNCT -RRB- _ _ _ _ _ 55 or or CCONJ CC _ _ _ _ _ 56 gold gold VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 57 compound compound NOUN NN Number=Sing _ _ _ _ 58 containing contain VERB VBG VerbForm=Ger _ _ _ _ 59 divalent divalent ADJ JJ Degree=Pos _ _ _ _ 60 gold gold NOUN NN Number=Sing _ _ _ _ 61 ion ion NOUN NN Number=Sing _ _ _ SpaceAfter=No 62 , , PUNCT , _ _ _ _ _ 63 HAuCl3 HAuCl3 NUM CD NumType=Card _ _ _ SpaceAfter=No 64 , , PUNCT , _ _ _ _ _ 65 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 66 no no DET DT _ _ _ _ _ 67 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 68 . . PUNCT . _ _ _ _ _ # sent_id = 7398 # text = The effect of AuTG on NF-kappaB-dependent gene expression was confirmed by a transient CAT assay. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 AuTG AuTG PROPN NNP Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 confirmed confirm VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 transient transient ADJ JJ Degree=Pos _ _ _ _ 18 CAT cat NOUN NN Number=Sing _ _ _ _ 19 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 7399 # text = Specific staining as well as electron microscopic examinations revealed the accumulation of metal gold in the cells, supporting our previous hypothesis that gold ions could block NF-kappaB-DNA binding by a redox mechanism. 1 Specific specific ADJ JJ Degree=Pos _ _ _ _ 2 staining stai VERB VBG VerbForm=Ger _ _ _ _ 3 as as ADV RB _ _ _ _ _ 4 well well ADV RB Degree=Pos _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 electron electron ADJ JJ Degree=Pos _ _ _ _ 7 microscopic microscopic ADJ JJ Degree=Pos _ _ _ _ 8 examinations examination NOUN NNS Number=Plur _ _ _ _ 9 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 metal metal NOUN NN Number=Sing _ _ _ _ 14 gold gold NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 supporting support VERB VBG VerbForm=Ger _ _ _ _ 20 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 21 previous previous ADJ JJ Degree=Pos _ _ _ _ 22 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 gold gold ADJ JJ Degree=Pos _ _ _ _ 25 ions ion NOUN NNS Number=Plur _ _ _ _ 26 could could AUX MD VerbForm=Fin _ _ _ _ 27 block block VERB VB VerbForm=Inf _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 -kappaB -kappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 DNA dna NOUN NN Number=Sing _ _ _ _ 32 binding binding VERB VBG VerbForm=Ger _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 redox redox NOUN NN Number=Sing _ _ _ _ 36 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 7400 # text = These observations indicate that the monovalent gold compound AuTG is a potentially useful drug for the treatment of patients infected with HIV. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 monovalent monovalent ADJ JJ Degree=Pos _ _ _ _ 7 gold gold ADJ JJ Degree=Pos _ _ _ _ 8 compound compound NOUN NN Number=Sing _ _ _ _ 9 AuTG Autg NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 potentially potentially ADV RB _ _ _ _ _ 13 useful useful ADJ JJ Degree=Pos _ _ _ _ 14 drug drug NOUN NN Number=Sing _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 treatment treatment NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 patients patient NOUN NNS Number=Plur _ _ _ _ 20 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7401 # text = Document 0030011088 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011088 0030011088 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7402 # text = T-lymphocytes from individuals with filarial inflammatory disease have increased transendothelial migration in vitro. 1 T- T- SYM NFP _ _ _ _ SpaceAfter=No 2 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 individuals individual NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 filarial filarial ADJ JJ Degree=Pos _ _ _ _ 7 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 8 disease disease NOUN NN Number=Sing _ _ _ _ 9 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 transendothelial transendothelial ADJ JJ Degree=Pos _ _ _ _ 12 migration migration NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7403 # text = The in vitro transendothelial migration of circulating filarial antigen-specific T-cells was examined in Wuchereria banerofti infection. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 4 transendothelial transendothelial ADJ JJ Degree=Pos _ _ _ _ 5 migration migration NOUN NN Number=Sing _ _ _ _ 6 of of SCONJ IN _ _ _ _ _ 7 circulating circulate VERB VBG VerbForm=Ger _ _ _ _ 8 filarial filarial ADJ JJ Degree=Pos _ _ _ _ 9 antigen antigen ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 11 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 Wuchereria Wuchereria PROPN NNP Number=Sing _ _ _ _ 17 banerofti banerofti NOUN NN Number=Sing _ _ _ _ 18 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 7404 # text = Circulating T-cells from individuals with filaria-induced lymphatic pathology (LP) had significantly greater migration through unstimulated HUVEC monolayers than did T-cells from asymptomatic infected (MF) individuals (P = 0.04). 1 Circulating circulate VERB VBG VerbForm=Ger _ _ _ _ 2 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 individuals individual NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 filaria filaria NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 lymphatic lymphatic ADJ JJ Degree=Pos _ _ _ _ 11 pathology pathology NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 LP LP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 significantly significantly ADV RB _ _ _ _ _ 17 greater greater ADJ JJR Degree=Cmp _ _ _ _ 18 migration migration NOUN NN Number=Sing _ _ _ _ 19 through through ADP IN _ _ _ _ _ 20 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 21 HUVEC Huvec NOUN NN Number=Sing _ _ _ _ 22 monolayers monolayer NOUN NNS Number=Plur _ _ _ _ 23 than than ADP IN _ _ _ _ _ 24 did do NOUN NN Number=Sing _ _ _ _ 25 T- T- PUNCT : _ _ _ _ SpaceAfter=No 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 asymptomatic asymptomatic ADJ JJ Degree=Pos _ _ _ _ 29 infected infect ADJ JJ Degree=Pos _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 MF MF NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 individuals individual NOUN NNS Number=Plur _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 P p NOUN NN Number=Sing _ _ _ _ 36 = = SYM SYM _ _ _ _ _ 37 0.04 0.04 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 7405 # text = In contrast to the MF individuals where no effect was seen, transendothelial migration of 48-hr filarial antigen stimulated T-cells from LP individuals was significantly (P = 0.01) greater than migration of 48-hr media-stimulated T-cells. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 MF MF PROPN NNP Number=Sing _ _ _ _ 6 individuals individual NOUN NNS Number=Plur _ _ _ _ 7 where where ADV WRB PronType=Rel _ _ _ _ 8 no no DET DT _ _ _ _ _ 9 effect effect NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 transendothelial transendothelial ADJ JJ Degree=Pos _ _ _ _ 14 migration migration NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 48 48 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 hr hr NOUN NN Number=Sing _ _ _ _ 19 filarial filarial ADJ JJ Degree=Pos _ _ _ _ 20 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 21 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 LP Lp NOUN NN Number=Sing _ _ _ _ 26 individuals individual NOUN NNS Number=Plur _ _ _ _ 27 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 28 significantly significantly ADV RB _ _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 P p SYM NFP _ _ _ _ _ 31 = = SYM SYM _ _ _ _ _ 32 0.01 0.01 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 greater greater ADJ JJR Degree=Cmp _ _ _ _ 35 than than ADP IN _ _ _ _ _ 36 migration migration NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 48 48 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 hr hr NOUN NN Number=Sing _ _ _ _ 41 media media NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 7406 # text = In six of seven patients examined, inhibition of the VLA-4/VCAM-1 pathway resulted in greater than 50% inhibition of transendothelial migration of T-cells. 1 In in ADP IN _ _ _ _ _ 2 six six NUM CD NumType=Card _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 seven seven NUM CD NumType=Card _ _ _ _ 5 patients patient NOUN NN Number=Sing _ _ _ _ 6 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 VLA-4/ Vla-4/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 pathway pathway NOUN NN Number=Sing _ _ _ _ 16 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 greater greater ADJ JJR Degree=Cmp _ _ _ _ 19 than than ADP IN _ _ _ _ _ 20 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 % % SYM NN Number=Sing _ _ _ _ 22 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 transendothelial transendothelial ADJ JJ Degree=Pos _ _ _ _ 25 migration migration NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7407 # text = Document 0030011090 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011090 0030011090 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7408 # text = A low NM23. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 low low ADJ JJ Degree=Pos _ _ _ _ 3 NM23. NM23. PROPN NNP Number=Sing _ _ _ SpaceAfter=No # sent_id = 7409 # text = H1 gene expression identifying high malignancy human melanomas. 1 H1 H1 NUM CD NumType=Card _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 identifying identify VERB VBG VerbForm=Ger _ _ _ _ 5 high high ADJ JJ Degree=Pos _ _ _ _ 6 malignancy malignancy NOUN NN Number=Sing _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 melanomas melanoma NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7410 # text = The NM23 gene has been proposed as a metastasis-suppressor gene, and its use has been suggested as prognostic factor. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 NM23 NM23 NOUN NN Number=Sing _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ _ 4 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 6 proposed propose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 metastasis metastasis NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 suppressor suppressor NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 16 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 use use NOUN NN Number=Sing _ _ _ _ 18 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 20 suggested suggest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 as as ADP IN _ _ _ _ _ 22 prognostic prognostic ADJ JJ Degree=Pos _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 7411 # text = NM23 was identified in a system of murine melanoma cell lines, in which an inverse relationship was found between NM23 expression and metastatic ability. 1 NM23 NM23 NOUN NN Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 system system NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 murine murine NOUN NN Number=Sing _ _ _ _ 9 melanoma melanoma NOUN NN Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 inverse inverse NOUN NN Number=Sing _ _ _ _ 17 relationship relationship NOUN NN Number=Sing _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 between between ADP IN _ _ _ _ _ 21 NM23 NM23 NUM CD NumType=Card _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 metastatic metastatic ADJ JJ Degree=Pos _ _ _ _ 25 ability ability NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 7412 # text = In a human malignant melanoma study NM23 expression was found to be significantly lower in metastases that developed less than 24 months after diagnosis of the primary tumours. 1 In in ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 malignant malignant ADJ JJ Degree=Pos _ _ _ _ 5 melanoma melanoma NOUN NN Number=Sing _ _ _ _ 6 study study NOUN NN Number=Sing _ _ _ _ 7 NM23 NM23 NUM CD NumType=Card _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 significantly significantly ADV RB _ _ _ _ _ 14 lower lower ADJ JJR Degree=Cmp _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 metastases metastase NOUN NNS Number=Plur _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 developed develop VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 less less ADJ JJR Degree=Cmp _ _ _ _ 20 than than ADP IN _ _ _ _ _ 21 24 24 NUM CD NumType=Card _ _ _ _ 22 months month NOUN NNS Number=Plur _ _ _ _ 23 after after ADP IN _ _ _ _ _ 24 diagnosis diagnosis NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 primary primary ADJ JJ Degree=Pos _ _ _ _ 28 tumours tumour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 7413 # text = The present paper studies the expression of the NM23. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 paper paper NOUN NN Number=Sing _ _ _ _ 4 studies study VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 NM23. NM23. PROPN NNP Number=Sing _ _ _ SpaceAfter=No # sent_id = 7414 # text = H1 gene in cell lines which derive from primary or metastatic human malignant melanomas in relation to staging, infiltration degree, lymphocytic infiltration, cell morphology, cell pigmentation, karyotype, and disease-free survival. 1 H1 H1 NUM CD NumType=Card _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 lines line NOUN NNS Number=Plur _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 derive derive VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 primary primary ADJ JJ Degree=Pos _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 metastatic metastatic ADJ JJ Degree=Pos _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 malignant malignant ADJ JJ Degree=Pos _ _ _ _ 14 melanomas melanoma NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 relation relation NOUN NN Number=Sing _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 staging staging NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 infiltration infiltration NOUN NN Number=Sing _ _ _ _ 21 degree degree NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 lymphocytic lymphocytic ADJ JJ Degree=Pos _ _ _ _ 24 infiltration infiltration NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 morphology morphology NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 pigmentation pigmentation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 karyotype karyotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 free free ADJ JJ Degree=Pos _ _ _ _ 38 survival survival NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 7415 # text = The level of mRNA expression of the NM23 gene is significantly lower in cell lines that derive from more infiltrating primary melanomas than in cell lines obtained from less infiltrating tumours. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 level level NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 NM23 NM23 NOUN NN Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 significantly significantly ADV RB _ _ _ _ _ 12 lower lower ADJ JJR Degree=Cmp _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 lines line NOUN NNS Number=Plur _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 derive derive VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 more more ADJ JJR Degree=Cmp _ _ _ _ 20 infiltrating infiltrat VERB VBG VerbForm=Ger _ _ _ _ 21 primary primary ADJ JJ Degree=Pos _ _ _ _ 22 melanomas melanoma NOUN NNS Number=Plur _ _ _ _ 23 than than ADP IN _ _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 lines line NOUN NNS Number=Plur _ _ _ _ 27 obtained obtain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 from from ADP IN _ _ _ _ _ 29 less less ADJ JJR Degree=Cmp _ _ _ _ 30 infiltrating infiltrat ADJ JJ Degree=Pos _ _ _ _ 31 tumours tumour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 7416 # text = Moreover, cell lines derived from tumours of patients with a disease-free survival of more than 24 months (24-58 months) express the NM23 gene at higher levels than cell lines obtained from melanomas of patients with a disease-free survival of less than 24 months (6-15 months). 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 cell cell VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 lines line NOUN NNS Number=Plur _ _ _ _ 5 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 tumours tumour NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 patients patient NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 free free ADJ JJ Degree=Pos _ _ _ _ 15 survival survival NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 more more ADJ JJR Degree=Cmp _ _ _ _ 18 than than ADP IN _ _ _ _ _ 19 24 24 NUM CD NumType=Card _ _ _ _ 20 months month NOUN NNS Number=Plur _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 24 24 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - SYM SYM _ _ _ _ SpaceAfter=No 24 58 58 NUM CD NumType=Card _ _ _ _ 25 months month NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 NM23 NM23 NUM CD NumType=Card _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ _ 31 at at ADP IN _ _ _ _ _ 32 higher higher ADJ JJR Degree=Cmp _ _ _ _ 33 levels level NOUN NNS Number=Plur _ _ _ _ 34 than than ADP IN _ _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ _ 36 lines line NOUN NNS Number=Plur _ _ _ _ 37 obtained obtaine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 from from ADP IN _ _ _ _ _ 39 melanomas melanoma NOUN NNS Number=Plur _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 patients patient NOUN NNS Number=Plur _ _ _ _ 42 with with ADP IN _ _ _ _ _ 43 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 44 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 free free ADJ JJ Degree=Pos _ _ _ _ 47 survival survival NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 less less ADJ JJR Degree=Cmp _ _ _ _ 50 than than ADP IN _ _ _ _ _ 51 24 24 NUM CD NumType=Card _ _ _ _ 52 months month NOUN NNS Number=Plur _ _ _ _ 53 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 54 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 55 - - SYM SYM _ _ _ _ SpaceAfter=No 56 15 15 NUM CD NumType=Card _ _ _ _ 57 months month NOUN NNS Number=Plur _ _ _ SpaceAfter=No 58 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7417 # text = Document 0030011093 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011093 0030011093 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7418 # text = Tissue factor expression of human monocytes is suppressed by lysophosphatidylcholine. 1 Tissue Tissue NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 lysophosphatidylcholine lysophosphatidylcholine NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7419 # text = The expression of tissue factor (TF), the principal initiator of coagulation, is increased during inflammation and atherosclerosis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 tissue tissue NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 TF TF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 principal principal ADJ JJ Degree=Pos _ _ _ _ 12 initiator initiator NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 coagulation coagulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 during during ADP IN _ _ _ _ _ 19 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 atherosclerosis atherosclerosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 7420 # text = Both conditions are promoted by lysophosphatidylcholine (lysoPC). 1 Both both DET DT _ _ _ _ _ 2 conditions condition NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 promoted promote VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 lysophosphatidylcholine lysophosphatidylcholine NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 lysoPC lysoPC NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 7421 # text = We observed in the present study that lysoPC (1 to 10 micromol/L) dose-dependently reduced TF activity in human monocytes, as elicited by lipopolysaccharide (LPS). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 present present ADJ JJ Degree=Pos _ _ _ _ 6 study study NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 lysoPC lysoPC PROPN NNP Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 10 10 NUM CD NumType=Card _ _ _ _ 13 micromol/ micromol/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 14 L l PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 dependently dependently ADV RB _ _ _ _ _ 19 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 TF Tf NOUN NN Number=Sing _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 as as SCONJ IN _ _ _ _ _ 27 elicited elicit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 7422 # text = Lysophosphatidylethanolamine (lysoPE) and other lysophospholipids did not affect LPS-induced TF activity of human monocytes. 1 Lysophosphatidylethanolamine Lysophosphatidylethanolamine PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 lysoPE lysoPE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 other other ADJ JJ Degree=Pos _ _ _ _ 7 lysophospholipids lysophospholipid NOUN NNS Number=Plur _ _ _ _ 8 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 affect affect VERB VB VerbForm=Inf _ _ _ _ 11 LPS Lps ADV RB _ _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 TF Tf NOUN NN Number=Sing _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 7423 # text = TF antigen expression as elicited by LPS was also lowered by lysoPC. 1 TF Tf ADP IN _ _ _ _ _ 2 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 as as SCONJ IN _ _ _ _ _ 5 elicited elicit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 LPS LPS PROPN NNP Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 also also ADV RB _ _ _ _ _ 10 lowered lower VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 lysoPC lysoPC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 7424 # text = Phospholipid analyses indicated a selective increase in the lysoPC content of the monocytes after preincubation with the lysophospholipid. 1 Phospholipid Phospholipid ADJ JJ Degree=Pos _ _ _ _ 2 analyses analysis NOUN NNS Number=Plur _ _ _ _ 3 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 selective selective ADJ JJ Degree=Pos _ _ _ _ 6 increase increase NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 lysoPC lysoPC NOUN NN Number=Sing _ _ _ _ 10 content content NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 14 after after ADP IN _ _ _ _ _ 15 preincubation preincubation NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 lysophospholipid lysophospholipid NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 7425 # text = LysoPC inhibited the TF activity of Mono Mac-6 cells to a similar extent as in the monocytes. 1 LysoPC LysoPC PROPN NNP Number=Sing _ _ _ _ 2 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 TF TF PROPN NNP Number=Sing _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Mono Mono PROPN NNP Number=Sing _ _ _ _ 8 Mac Mac PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 6 6 NUM CD NumType=Card _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 similar similar ADJ JJ Degree=Pos _ _ _ _ 15 extent extent NOUN NN Number=Sing _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 7426 # text = LPS binding to plasma membrane receptors and internalization of LPS into monocytes were not affected by lysoPC. 1 LPS Lp NOUN NNS Number=Plur _ _ _ _ 2 binding bind VERB VBG VerbForm=Ger _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 plasma plasma NOUN NN Number=Sing _ _ _ _ 5 membrane membrane NOUN NN Number=Sing _ _ _ _ 6 receptors receptor NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 internalization internalization NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 LPS Lp NOUN NNS Number=Plur _ _ _ _ 11 into into ADP IN _ _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 lysoPC lysoPC NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 7427 # text = In contrast, LPS-mediated nuclear binding of nuclear factor-kappaB/Rel to a TF-specific kappaB site was inhibited by lysoPC. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 - - PUNCT : _ _ _ _ SpaceAfter=No 6 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 binding binding NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 -kappaB -kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 / / PUNCT , _ _ _ _ SpaceAfter=No 14 Rel Rel PROPN NNP Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 TF TF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 kappaB kappab NOUN NN Number=Sing _ _ _ _ 21 site site NOUN NN Number=Sing _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 lysoPC lysoPC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 7428 # text = Induction of TF mRNA expression by LPS tended to be partially reduced by the lysophospholipid. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 TF TF PROPN NNP Number=Sing _ _ _ _ 4 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 LPS Lp NOUN NNS Number=Plur _ _ _ _ 8 tended tend VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 partially partially ADV RB _ _ _ _ _ 12 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 lysophospholipid lysophospholipid NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 7429 # text = Preincubation with lysoPC increased monocytic cAMP levels. 1 Preincubation Preincubation NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 lysoPC lysoPC PROPN NNP Number=Sing _ _ _ _ 4 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 6 cAMP camp NOUN NN Number=Sing _ _ _ _ 7 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 7430 # text = Inhibition of adenylyl cyclase by pretreatment with 2'-deoxy-3'-adenosine monophosphate partially reversed the inhibition of TF activity promoted by lysoPC. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 adenylyl adenylyl ADJ JJ Degree=Pos _ _ _ _ 4 cyclase cyclase NOUN NN Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 pretreatment pretreatment NOUN NN Number=Sing _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 deoxy deoxy NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 '- '- PUNCT . _ _ _ _ SpaceAfter=No 15 adenosine adenosine NOUN NN Number=Sing _ _ _ _ 16 monophosphate monophosphate NOUN NN Number=Sing _ _ _ _ 17 partially partially ADV RB _ _ _ _ _ 18 reversed reverse VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 TF TF PROPN NNP Number=Sing _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 promoted promote VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 lysoPC lysoPC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 7431 # text = In conclusion, lysoPC markedly decreases LPS-mediated TF expression of human monocytes, the effect probably being mediated by both transcriptional and posttranscriptional mechanisms. 1 In in ADP IN _ _ _ _ _ 2 conclusion conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 lysoPC lysoPC PROPN NNP Number=Sing _ _ _ _ 5 markedly markedly ADV RB _ _ _ _ _ 6 decreases decrease VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 TF Tf NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 effect effect NOUN NN Number=Sing _ _ _ _ 18 probably probably ADV RB _ _ _ _ _ 19 being be AUX VBG VerbForm=Ger _ _ _ _ 20 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 both both CCONJ CC _ _ _ _ _ 23 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 posttranscriptional posttranscriptional ADJ JJ Degree=Pos _ _ _ _ 26 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 7432 # text = LysoPC may thus attenuate activation of coagulation during inflammation and atherosclerosis. 1 LysoPC Lysopc NOUN NN Number=Sing _ _ _ _ 2 may may AUX MD VerbForm=Fin _ _ _ _ 3 thus thus ADV RB _ _ _ _ _ 4 attenuate attenuate VERB VB VerbForm=Inf _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 coagulation coagulation NOUN NN Number=Sing _ _ _ _ 8 during during ADP IN _ _ _ _ _ 9 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 atherosclerosis atherosclerosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7433 # text = Document 0030011094 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011094 0030011094 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7434 # text = IL-2-independent activation and proliferation in human T cells induced by CD28. 1 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 independent independent ADJ JJ Degree=Pos _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 CD28 CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7435 # text = Although the role of CD28 in T cell costimulation is firmly established, the mechanisms by which it exerts its costimulatory actions are less clear. 1 Although although SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 role role NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 firmly firmly ADV RB _ _ _ _ _ 12 established establish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 19 exerts exert VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 22 actions action NOUN NNS Number=Plur _ _ _ _ 23 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 less less ADV RBR Degree=Cmp _ _ _ _ 25 clear clear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 7436 # text = In many circumstances it is difficult to distinguish the effects of CD28 from subsequent actions of cytokines, such as IL-2, on T cell proliferation. 1 In in ADP IN _ _ _ _ _ 2 many many ADJ JJ Degree=Pos _ _ _ _ 3 circumstances circumstance NOUN NNS Number=Plur _ _ _ _ 4 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 difficult difficult ADJ JJ Degree=Pos _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 distinguish distinguish VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 effects effect NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 CD28 Cd28 NOUN NN Number=Sing _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 15 actions action NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 such such ADJ JJ Degree=Pos _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 T t PROPN NNP Number=Sing _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 7437 # text = Here, we report a model of CD28 costimulation using PMA plus the natural ligand CD80 that resulted in very limited stimulation of IL-2, as evidenced by both cytokine production and IL-2 promoter stimulation. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 model model NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 CD28 CD28 NUM CD NumType=Card _ _ _ _ 9 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 10 using use VERB VBG VerbForm=Ger _ _ _ _ 11 PMA PMA PROPN NNP Number=Sing _ _ _ _ 12 plus plus CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 natural natural ADJ JJ Degree=Pos _ _ _ _ 15 ligand ligand NOUN NN Number=Sing _ _ _ _ 16 CD80 CD80 NOUN NN Number=Sing _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 very very ADV RB _ _ _ _ _ 21 limited limited ADJ JJ Degree=Pos _ _ _ _ 22 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 as as SCONJ IN _ _ _ _ _ 29 evidenced evidence VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 both both DET DT _ _ _ _ _ 32 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 33 production production NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 2 2 NUM CD NumType=Card _ _ _ _ 38 promoter promoter NOUN NN Number=Sing _ _ _ _ 39 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 7438 # text = Promoter assays revealed CD28-dependent effects on both NF-kappaB and AP-1, but not on NF-AT or the intact IL-2 promoter. 1 Promoter Promoter NOUN NN Number=Sing _ _ _ _ 2 assays assays NOUN NNS Number=Plur _ _ _ _ 3 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 CD28 CD28 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 -dependent -dependent ADJ JJ Degree=Pos _ _ _ _ 6 effects effect NOUN NNS Number=Plur _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 both both CCONJ CC _ _ _ _ _ 9 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 not not ADV RB _ _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 AT at PROPN NNP Number=Sing _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 intact intact NOUN NN Number=Sing _ _ _ _ 26 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 7439 # text = In addition, T cell proliferation was completely resistant to the actions of the immunosuppressant cyclosporin A (CsA). 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 T t NUM CD NumType=Card _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 completely completely ADV RB _ _ _ _ _ 9 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 actions action NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 immunosuppressant immunosuppressant ADJ JJ Degree=Pos _ _ _ _ 16 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 17 A A NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 7440 # text = Moreover T cell proliferation was unaffected by the addition of blocking Abs to both IL-2 and the IL-2 receptor, demonstrating that this form of costimulation by CD28 was independent of IL-2. 1 Moreover moreover PROPN NNP Number=Sing _ _ _ _ 2 T t PROPN NNP Number=Sing _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 unaffected unaffect ADJ JJ Degree=Pos _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 addition addition NOUN NN Number=Sing _ _ _ _ 10 of of SCONJ IN _ _ _ _ _ 11 blocking block VERB VBG VerbForm=Ger _ _ _ _ 12 Abs Ab NOUN NNS Number=Plur _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 both both CCONJ CC _ _ _ _ _ 15 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 demonstrating demonstrat VERB VBG VerbForm=Ger _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 form form NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 33 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 34 independent independent ADJ JJ Degree=Pos _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 7441 # text = We also investigated the effects of stimulating T cell blasts with CD80 alone and found that there was a limited requirement for IL-2 in this system. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 of of SCONJ IN _ _ _ _ _ 7 stimulating stimulate VERB VBG VerbForm=Ger _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 blasts blast NOUN NNS Number=Plur _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 CD80 CD80 PROPN NNP Number=Sing _ _ _ _ 13 alone alone ADV RB _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 there there PRON EX _ _ _ _ _ 18 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 limited limited ADJ JJ Degree=Pos _ _ _ _ 21 requirement requirement NOUN NN Number=Sing _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 7442 # text = We conclude that CD28 costimulation can cause substantial T cell proliferation in the absence of IL-2, which is driven by a soluble factor independent of NF-AT transactivation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 CD28 CD28 NOUN NN Number=Sing _ _ _ _ 5 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 6 can can AUX MD VerbForm=Fin _ _ _ _ 7 cause cause VERB VB VerbForm=Inf _ _ _ _ 8 substantial substantial ADJ JJ Degree=Pos _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 absence absence NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 which which PRON WDT PronType=Rel _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 driven drive VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ _ 27 independent independent ADJ JJ Degree=Pos _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 AT at ADP IN _ _ _ _ _ 32 transactivation transactivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7443 # text = Document 0030011097 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011097 0030011097 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7444 # text = Characterization of the nuclear and cytoplasmic components of the lymphoid-specific nuclear factor of activated T cells (NF-AT) complex. 1 Characterization Characterization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 7 components component NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 T T PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7445 # text = The lymphoid-specific transcription complex, NF-AT, is involved in early gene activation in T cells and is assembled from a pre-existing, T cell restricted cytoplasmic factor and an inducible ubiquitous nuclear component within 30 min after activation through the antigen receptor. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 involved involved ADJ JJ Degree=Pos _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 early early ADJ JJ Degree=Pos _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 T T PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 assembled assemble VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 pre-existing pre-existing NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 cell cell ADV RB Degree=Pos _ _ _ _ 30 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 32 factor factor NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 36 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 37 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 38 component component NOUN NN Number=Sing _ _ _ _ 39 within within ADP IN _ _ _ _ _ 40 30 30 NUM CD NumType=Card _ _ _ _ 41 min min NOUN NNS Number=Plur _ _ _ _ 42 after after ADP IN _ _ _ _ _ 43 activation activation NOUN NN Number=Sing _ _ _ _ 44 through through ADP IN _ _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 47 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 7446 # text = Recent studies have implicated the family of AP1 factors as components of the murine NF-AT complex. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 implicated implicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 family family NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 AP1 AP1 NUM CD NumType=Card _ _ _ _ 9 factors factor NOUN NNS Number=Plur _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 components component NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 murine murine PROPN NNP Number=Sing _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 AT AT ADP IN _ _ _ _ _ 18 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 7447 # text = Evidence is provided here that the nuclear component of human NF-AT contains the phorbol ester-inducible transcription factor AP1 (Jun/Fos). 1 Evidence evidence NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 provided provide VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 here here ADV RB PronType=Dem _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 component component NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 AT at PRON WDT PronType=Rel _ _ _ _ 14 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 17 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 AP1 AP1 PROPN NNP Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 / / PUNCT , _ _ _ _ SpaceAfter=No 26 Fos Fos PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 7448 # text = We further characterize which AP1 family members can assume this role. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 further further ADJ JJ Degree=Pos _ _ _ _ 3 characterize characterize NOUN NN Number=Sing _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 AP1 AP1 NUM CD NumType=Card _ _ _ _ 6 family family NOUN NN Number=Sing _ _ _ _ 7 members member NOUN NNS Number=Plur _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 assume assume VERB VB VerbForm=Inf _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 7449 # text = Antisera to Fos inhibits NF-AT DNA binding as does an oligonucleotide containing a binding site for AP1. 1 Antisera Antisera PROPN NNP Number=Sing _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 Fos Fos PROPN NNP Number=Sing _ _ _ _ 4 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 AT AT NOUN NN Number=Sing _ _ _ _ 8 DNA dna NOUN NN Number=Sing _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 as as SCONJ IN _ _ _ _ _ 11 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 oligonucleotide oligonucleotide NOUN NN Number=Sing _ _ _ _ 14 containing contain VERB VBG VerbForm=Ger _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 site site NOUN NN Number=Sing _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 AP1 AP1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 7450 # text = Constitutive expression in vivo of Fos, and to a lesser extent Fra-1, eliminates the requirement for phorbol 12-myristate 13-acetate (PMA) stimulation, leaving NF-AT-directed transcription responsive to calcium ionophore alone. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 vivo vivo NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 Fos Fos PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 lesser lesser ADJ JJR Degree=Cmp _ _ _ _ 12 extent extent NOUN NN Number=Sing _ _ _ _ 13 Fra Fra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 eliminates eliminate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 requirement requirement NOUN NN Number=Sing _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 21 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT : _ _ _ _ SpaceAfter=No 23 myristate myristate NOUN NN Number=Sing _ _ _ _ 24 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - PUNCT : _ _ _ _ SpaceAfter=No 26 acetate acetate NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 leaving leave VERB VBG VerbForm=Ger _ _ _ _ 33 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 transcription transcription NOUN NN Number=Sing _ _ _ _ 39 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 40 to to PART TO _ _ _ _ _ 41 calcium calcium VERB VB VerbForm=Inf _ _ _ _ 42 ionophore ionophore ADV RB _ _ _ _ _ 43 alone alone ADV RB _ _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 7451 # text = Overexpression of cJun or JunD, but not JunB, also eliminates the requirement for PMA, indicating that many but not all Jun- and Fos-related proteins functionally activate NF-AT-dependent transcription in the presence of the cytoplasmic component. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cJun cJun PROPN NNP Number=Sing _ _ _ _ 4 or or CCONJ CC _ _ _ _ _ 5 JunD JunD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 but but CCONJ CC _ _ _ _ _ 8 not not ADV RB _ _ _ _ _ 9 JunB JunB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 also also ADV RB _ _ _ _ _ 12 eliminates eliminate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 requirement requirement NOUN NN Number=Sing _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 many many ADJ JJ Degree=Pos _ _ _ _ 21 but but CCONJ CC _ _ _ _ _ 22 not not ADV RB _ _ _ _ _ 23 all all DET DT _ _ _ _ _ 24 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 Fos Fos PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 related related ADJ JJ Degree=Pos _ _ _ _ 30 proteins protein NOUN NNS Number=Plur _ _ _ _ 31 functionally functionally ADV RB _ _ _ _ _ 32 activate activate ADJ JJ Degree=Pos _ _ _ _ 33 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 AT AT ADV RB _ _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 38 transcription transcription NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 presence presence NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 45 component component NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 7452 # text = NF-AT DNA binding can be reconstituted in vitro using semi-purified AP1 proteins mixed with cytosol from T lymphocytes. 1 NF Nf ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 AT at ADJ JJ Degree=Pos _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ _ 5 binding binding NOUN NN Number=Sing _ _ _ _ 6 can can AUX MD VerbForm=Fin _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 reconstituted reconstitute VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 vitro vitro NUM CD NumType=Card _ _ _ _ 11 using use VERB VBG VerbForm=Ger _ _ _ _ 12 semi-purified semi-purified ADJ JJ Degree=Pos _ _ _ _ 13 AP1 Ap1 NOUN NN Number=Sing _ _ _ _ 14 proteins protein NOUN NNS Number=Plur _ _ _ _ 15 mixed mix VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 T T PROPN NNP Number=Sing _ _ _ _ 20 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 7453 # text = Fos proteins are not needed for this reconstitution, and although JunB is not functional, it can participate in the NF-AT DNA binding complex. 1 Fos Fo ADJ JJ Degree=Pos _ _ _ _ 2 proteins protein NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 needed need VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 reconstitution reconstitution NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 although although SCONJ IN _ _ _ _ _ 12 JunB JunB PROPN NNP Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 functional functional ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 18 can can AUX MD VerbForm=Fin _ _ _ _ 19 participate participate VERB VB VerbForm=Inf _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 AT at NOUN NN Number=Sing _ _ _ _ 25 DNA dna NOUN NN Number=Sing _ _ _ _ 26 binding bind VERB VBG VerbForm=Ger _ _ _ _ 27 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 7454 # text = Finally, we have partially purified the cytoplasmic component of NF-AT and show by elution and renaturation from SDS-polyacrylamide gel electrophoresis gels that it has a molecular mass between 94 and 116 kDa and may have multiple differentially modified forms. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 partially partially ADV RB _ _ _ _ _ 6 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 9 component component NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 AT AT PROPN NNP Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 show show VERB VB VerbForm=Inf _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 elution elution NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 renaturation renaturation NOUN NN Number=Sing _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 SDS SDS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 polyacrylamide polyacrylamide NOUN NN Number=Sing _ _ _ _ 24 gel gel NOUN NN Number=Sing _ _ _ _ 25 electrophoresis electrophoresis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 gels gel NOUN NNS Number=Plur _ _ _ _ 27 that that SCONJ IN _ _ _ _ _ 28 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 29 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 32 mass mass NOUN NN Number=Sing _ _ _ _ 33 between between ADP IN _ _ _ _ _ 34 94 94 NUM CD NumType=Card _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 116 116 NUM CD NumType=Card _ _ _ _ 37 kDa kDa NOUN NN Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 may may AUX MD VerbForm=Fin _ _ _ _ 40 have have VERB VB VerbForm=Inf _ _ _ _ 41 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 42 differentially differentially ADV RB _ _ _ _ _ 43 modified modified VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 forms form NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7455 # text = Document 0030011099 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011099 0030011099 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7456 # text = Amelioration of rat cerulein pancreatitis by guamerin-derived peptide, a novel elastase inhibitor. 1 Amelioration Amelioration NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 rat rat NOUN NN Number=Sing _ _ _ _ 4 cerulein cerulein NOUN NN Number=Sing _ _ _ _ 5 pancreatitis pancreatitis NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 guamerin guamerin NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 peptide peptide NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 novel novel NOUN NN Number=Sing _ _ _ _ 14 elastase elastase NOUN NN Number=Sing _ _ _ _ 15 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7457 # text = Increased activity of various proteases is observed in both human and experimental pancreatitis; however, the information on the effects of specific protease inhibitors on the disease is limited. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 activity activity NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 various various ADJ JJ Degree=Pos _ _ _ _ 5 proteases protease NOUN NNS Number=Plur _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 both both DET DT _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 experimental experimental ADJ JJ Degree=Pos _ _ _ _ 13 pancreatitis pancreatitis NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ; ; PUNCT , _ _ _ _ _ 15 however however ADV RB _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 information information NOUN NN Number=Sing _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 effects effect NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 specific specific ADJ JJ Degree=Pos _ _ _ _ 24 protease protease NOUN NN Number=Sing _ _ _ _ 25 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 disease disease NOUN NN Number=Sing _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 limited limited ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 7458 # text = In this study we show that a novel elastase inhibitor, guamerin-derived synthetic peptide (GDSP), improves the parameters of cerulein-induced acute pancreatitis in the rat. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 show show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 novel novel NOUN NN Number=Sing _ _ _ _ 9 elastase elastase NOUN NN Number=Sing _ _ _ _ 10 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 guamerin guamerin NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 16 peptide peptide NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 GDSP GDSP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 improves improve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 parameters parameter NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 cerulein- cerulein- SYM NFP _ _ _ _ SpaceAfter=No 26 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 acute acute ADJ JJ Degree=Pos _ _ _ _ 28 pancreatitis pancreatitis NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 rat rat NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 7459 # text = The effects of GDSP on pancreatic weight, serum amylase and lipase, morphologic changes in the pancreas, neutrophil infiltration, and nuclear factor KB (NF-KB) activation were measured in rats infused with supramaximal dose of cerulein (5 (g/kg/h) for 6 h. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 GDSP GDSP NOUN NN Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 pancreatic pancreatic ADJ JJ Degree=Pos _ _ _ _ 7 weight weight NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 serum serum NOUN NN Number=Sing _ _ _ _ 10 amylase amylase NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 lipase lipase NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 morphologic morphologic ADJ JJ Degree=Pos _ _ _ _ 15 changes change NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 pancreas pancrea NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 21 infiltration infiltration NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 KB KB PROPN NNP Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 KB KB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ _ 33 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 measured measure VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 rats rat NOUN NNS Number=Plur _ _ _ _ 37 infused infuse VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 with with ADP IN _ _ _ _ _ 39 supramaximal supramaximal ADJ JJ Degree=Pos _ _ _ _ 40 dose dose NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 cerulein cerulein NOUN NN Number=Sing _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 5 5 NUM CD NumType=Card _ _ _ _ 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 g/ gith PUNCT HYPH _ _ _ _ SpaceAfter=No 47 kg kg NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 / / PUNCT , _ _ _ _ SpaceAfter=No 49 h h INTJ UH _ _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ _ 51 for for ADP IN _ _ _ _ _ 52 6 6 NUM CD NumType=Card _ _ _ _ 53 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 7460 # text = The effects of GDSP were also measured on superoxide formation by activated human neutrophils. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 GDSP GDSP PROPN NNP Number=Sing _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 measured measure VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 superoxide superoxide NOUN NN Number=Sing _ _ _ _ 10 formation formation NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 7461 # text = The effects of GDSP were compared with those of another elastase inhibitor, elastatinal. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 GDSP GDSP PROPN NNP Number=Sing _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 compared compare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 another another DET DT _ _ _ _ _ 11 elastase elastase NOUN NN Number=Sing _ _ _ _ 12 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 elastatinal elastatinal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 7462 # text = GDSP significantly inhibited edema formation, neutrophil infiltration, acinar cell damage, and plasma lipase and amylase increases caused by cerulein. 1 GDSP GDSp SYM NFP _ _ _ _ _ 2 significantly significantly ADV RB _ _ _ _ _ 3 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 edema edema NOUN NN Number=Sing _ _ _ _ 5 formation formation NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 8 infiltration infiltration NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 acinar acinar ADJ JJ Degree=Pos _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 damage damage NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 plasma plasma NOUN NN Number=Sing _ _ _ _ 16 lipase lipase NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 amylase amylase NOUN NN Number=Sing _ _ _ _ 19 increases increase NOUN NNS Number=Plur _ _ _ _ 20 caused cause VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 cerulein cerulein NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 7463 # text = GDSP also completely inhibited superoxide formation in the human neutrophils stimulated by N-formyl-methionine-leucine-phenyl-alanine (fMLP) or 12-O-tetradecanoylphorbol-13-acetate (TPA). 1 GDSP GDSp SYM NFP _ _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 completely completely ADV RB _ _ _ _ _ 4 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 superoxide superoxide ADJ JJ Degree=Pos _ _ _ _ 6 formation formation NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 11 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 formyl formyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 -methionine-leucine-phenyl-alanine -methionine-leucine-phenyl-alanine NUM CD NumType=Card _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 fMLP fMLP NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 12-O-tetradecanoylphorbol 12-O-tetradecanoylphorbol PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 -acetate -acetate NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 7464 # text = Elastatinal had some of the same effects as GDSP but was less potent and effective. 1 Elastatinal Elastatinal PROPN NNP Number=Sing _ _ _ _ 2 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 some some DET DT _ _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 same same ADJ JJ Degree=Pos _ _ _ _ 7 effects effect NOUN NNS Number=Plur _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 GDSP GDSP PROPN NNP Number=Sing _ _ _ _ 10 but but CCONJ CC _ _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 less less ADV RBR Degree=Cmp _ _ _ _ 13 potent potent ADJ JJ Degree=Pos _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 effective effective ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 7465 # text = These results demonstrate a beneficial effect of GDSP, a novel specific elastase inhibitor, on the development of rat cerulein pancreatitis. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 beneficial beneficial ADJ JJ Degree=Pos _ _ _ _ 6 effect effect NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 GDSP GDSP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 novel novel NOUN NN Number=Sing _ _ _ _ 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 elastase elastase NOUN NN Number=Sing _ _ _ _ 14 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 development development NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 rat rat NOUN NN Number=Sing _ _ _ _ 21 cerulein cerulein NOUN NN Number=Sing _ _ _ _ 22 pancreatitis pancreatitis NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7466 # text = Document 0030011100 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011100 0030011100 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7467 # text = Human neutrophils express GH-N gene transcripts and the pituitary transcription factor Pit-1b. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 3 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 GH Gh PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 N n CCONJ CC Abbr=Yes _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 pituitary pituitary ADJ JJ Degree=Pos _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 Pit pit NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 b b NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7468 # text = Since GH stimulates the development and function of granulocytes, we investigated the expression of GH in granulocyte subsets. 1 Since since SCONJ IN _ _ _ _ _ 2 GH GH PROPN NNP Number=Sing _ _ _ _ 3 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 development development NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 function function NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 12 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 GH Gh PROPN NNP Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 granulocyte granulocyte ADJ JJ Degree=Pos _ _ _ _ 19 subsets subset NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 7469 # text = By immunocytochemistry, 25 +/- 7% of the human neutrophils were shown to express immunoreactive GH, whereas eosinophils were negative. 1 By by ADP IN _ _ _ _ _ 2 immunocytochemistry immunocytochemistry NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 25 25 NUM CD NumType=Card _ _ _ _ 5 +/- +/- SYM SYM _ _ _ _ _ 6 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 % % SYM NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 express express VERB VB VerbForm=Inf _ _ _ _ 16 immunoreactive immunoreactive ADJ JJ Degree=Pos _ _ _ _ 17 GH Gh NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 whereas whereas SCONJ IN _ _ _ _ _ 20 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ _ 21 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 negative negative ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 7470 # text = Reversed transcription (RT)-PCR analysis demonstrated GH mRNA in neutrophils. 1 Reversed reversed ADJ JJ Degree=Pos _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 RT Rt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 6 - - PUNCT : _ _ _ _ SpaceAfter=No 7 PCR Pcr ADJ JJ Degree=Pos _ _ _ _ 8 analysis analysis NOUN NN Number=Sing _ _ _ _ 9 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 GH Gh PROPN NNP Number=Sing _ _ _ _ 11 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 7471 # text = Restriction analysis revealed that neutrophils express the GH-N gene but not the GH-V gene. 1 Restriction restriction NOUN NN Number=Sing _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 6 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 GH GH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 N N PROPN NNP Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 GH GH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 V V PROPN NNP Number=Sing _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 7472 # text = Furthermore, we demonstrated by western blot analysis that neutrophils express an alternatively spliced variant of the pituitary transcription factor Pit-1, designated Pit-1b. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 western western ADJ JJ Degree=Pos _ _ _ _ 7 blot blot NOUN NN Number=Sing _ _ _ _ 8 analysis analysis NOUN NN Number=Sing _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 neutrophils neutrophil VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 express express ADJ JJ Degree=Pos _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 alternatively alternatively ADV RB _ _ _ _ _ 14 spliced splice VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 variant variant NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 pituitary pituitary ADJ JJ Degree=Pos _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 Pit pit NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 Pit pit NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 -1b -1b NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7473 # text = Document 0030011104 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011104 0030011104 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7474 # text = N- and C-terminal sequences control degradation of MAD3/I kappa B alpha in response to inducers of NF-kappa B activity. 1 N not PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 C c PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 7 sequences sequence NOUN NNS Number=Plur _ _ _ _ 8 control control NOUN NN Number=Sing _ _ _ _ 9 degradation degradation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 MAD3/ Mad3/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 13 kappa kappa X FW Foreign=Yes _ _ _ _ 14 B b ADJ JJ Degree=Pos _ _ _ _ 15 alpha alpha NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 response response NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 inducers inducer NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa PROPN NNP Number=Sing _ _ _ _ 24 B b ADJ JJ Degree=Pos _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7475 # text = The proteolytic degradation of the inhibitory protein MAD3/I kappa B alpha in response to extracellular stimulation is a prerequisite step in the activation of the transcription factor NF-kappa B. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 proteolytic proteolytic ADJ JJ Degree=Pos _ _ _ _ 3 degradation degradation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 MAD3/ Mad3/ PUNCT , _ _ _ _ SpaceAfter=No 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 kappa kappa X FW Foreign=Yes _ _ _ _ 11 B b ADJ JJ Degree=Pos _ _ _ _ 12 alpha alpha NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 response response NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 17 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 prerequisite prerequisite ADJ JJ Degree=Pos _ _ _ _ 21 step step NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 factor factor NOUN NN Number=Sing _ _ _ _ 29 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappa kappa PROPN NNP Number=Sing _ _ _ _ 32 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 7476 # text = Analysis of the expression of human I kappa B alpha protein in stable transfectants of mouse 70Z/3 cells shows that, as for the endogenous murine protein, exogenous 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 8 kappa kappa X GW _ _ _ _ _ 9 B b X GW _ _ _ _ _ 10 alpha alpha X GW _ _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 stable stable ADJ JJ Degree=Pos _ _ _ _ 14 transfectants transfectant NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 mouse mouse NOUN NN Number=Sing _ _ _ _ 17 70Z 70Z PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 / / PUNCT , _ _ _ _ SpaceAfter=No 19 3 3 NUM CD NumType=Card _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 shows show VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 28 murine murine NOUN NN Number=Sing _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 exogenous exogenous X ADD _ _ _ _ _ # sent_id = 7477 # text = I kappa 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 7478 # text = B alpha is degraded in response to inducers of NF-kappa B activity, such as phorbol myristate acetate or lipopolysaccharide. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 alpha alpha NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 degraded degrad VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 response response NOUN NN Number=Sing _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 inducers inducer NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 such such ADJ JJ Degree=Pos _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 19 myristate myristate NOUN NN Number=Sing _ _ _ _ 20 acetate acetate NOUN NN Number=Sing _ _ _ _ 21 or or CCONJ CC _ _ _ _ _ 22 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 7479 # text = In addition, pretreatment of the cells with the proteasome inhibitor N-Ac-Leu-Leu-norleucinal inhibits this ligand-induced degradation and, in agreement with previous studies, stabilizes a hyperphosphorylated form of the human I kappa B alpha protein. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 pretreatment pretreatment NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 proteasome proteasome ADJ JJ Degree=Pos _ _ _ _ 11 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 12 N N PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 Ac Ac PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 Leu Leu PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 Leu-norleucinal Leu-norleucinal ADJ JJ Degree=Pos _ _ _ _ 19 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 20 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 21 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 degradation degradation NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 agreement agreement NOUN NN Number=Sing _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 previous previous ADJ JJ Degree=Pos _ _ _ _ 31 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 stabilizes stabilize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 hyperphosphorylated hyperphosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 form form NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 human human ADJ JJ Degree=Pos _ _ _ _ 40 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 41 kappa kappa PROPN NNP Number=Sing _ _ _ _ 42 B b PROPN NNP Number=Sing _ _ _ _ 43 alpha alpha ADP IN _ _ _ _ _ 44 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 7480 # text = By expressing mutant forms of the human protein in this cell line, we have been able to delineate the sequences responsible for both the ligand-induced phosphorylation and the degradation of I kappa B alpha. 1 By by ADP IN _ _ _ _ _ 2 expressing express ADJ JJ Degree=Pos _ _ _ _ 3 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 4 forms form NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 15 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 17 able able ADJ JJ Degree=Pos _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 delineate delineate VERB VB VerbForm=Inf _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 sequences sequence NOUN NNS Number=Plur _ _ _ _ 22 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 both both CCONJ CC _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 degradation degradation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 35 kappa kappa PROPN NNP Number=Sing _ _ _ _ 36 B B PROPN NNP Number=Sing _ _ _ _ 37 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 7481 # text = Our results show that deletion of the C terminus of the I kappa B alpha molecule up to amino acid 279 abolishes constitutive but not ligand-inducible phosphorylation and inhibits ligand-inducible degradation. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 deletion deletion NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 C C PROPN NNP Number=Sing _ _ _ _ 9 terminus terminus NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 13 kappa kappa X GW _ _ _ _ _ 14 B benefit X GW _ _ _ _ _ 15 alpha alpha X GW _ _ _ _ _ 16 molecule molecule X GW _ _ _ _ _ 17 up up X GW _ _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 amino kaminow DET DT _ _ _ _ _ 20 acid acid ADJ JJ Degree=Pos _ _ _ _ 21 279 279 NUM CD NumType=Card _ _ _ _ 22 abolishes abolish NOUN NNS Number=Plur _ _ _ _ 23 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 24 but but CCONJ CC _ _ _ _ _ 25 not not PART RB _ _ _ _ _ 26 ligand ligand ADV RB _ _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 29 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 32 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 35 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 7482 # text = Further analysis reveals that the inducible phosphorylation of I kappa B alpha maps to two serines in the N terminus of the protein (residues 32 and 36) and that the mutation of either residue is sufficient to abolish ligand-induced degradation, whereas both residues must be mutated to abolish inducible phosphorylation of the protein. 1 Further further ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 reveals reveal NOUN NNS Number=Plur _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 7 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 kappa kappa X FW Foreign=Yes _ _ _ _ 11 B B ADJ JJ Degree=Pos _ _ _ _ 12 alpha alpha NOUN NN Number=Sing _ _ _ _ 13 maps map NOUN NNS Number=Plur _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 two two NUM CD NumType=Card _ _ _ _ 16 serines serine NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 N N PROPN NNP Number=Sing _ _ _ _ 20 terminus terminus NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 residues residue NOUN NNS Number=Plur _ _ _ _ 26 32 32 NUM CD NumType=Card _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 36 36 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 that that SCONJ IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 mutation mutation NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 either either DET DT _ _ _ _ _ 36 residue residue NOUN NN Number=Sing _ _ _ _ 37 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 39 to to PART TO _ _ _ _ _ 40 abolish abolish VERB VB VerbForm=Inf _ _ _ _ 41 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 whereas whereas SCONJ IN _ _ _ _ _ 47 both both DET DT _ _ _ _ _ 48 residues residue NOUN NNS Number=Plur _ _ _ _ 49 must must AUX MD VerbForm=Fin _ _ _ _ 50 be be AUX VB VerbForm=Inf _ _ _ _ 51 mutated mutate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 52 to to PART TO _ _ _ _ _ 53 abolish abolish VERB VB VerbForm=Inf _ _ _ _ 54 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 55 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 56 of of ADP IN _ _ _ _ _ 57 the the DET DT Definite=Def|PronType=Art _ _ _ _ 58 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 7483 # text = (ABSTRACT TRUNCATED AT 250 WORDS) 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 ABSTRACT ABSTRACT X GW _ _ _ _ _ 3 TRUNCATED Truncate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 AT at ADV RB _ _ _ _ _ 5 250 250 NUM CD NumType=Card _ _ _ _ 6 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7484 # text = Document 0030011106 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011106 0030011106 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7485 # text = Cell growth-regulated expression of mammalian MCM5 and MCM6 genes mediated by the transcription factor E2F. 1 Cell cell NOUN NN Number=Sing _ _ _ _ 2 growth- growth- PUNCT : _ _ _ _ SpaceAfter=No 3 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 7 MCM5 MCM5 PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 MCM6 MCM6 PROPN NNP Number=Sing _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ _ 11 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 E2F E2F PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7486 # text = Initiation of DNA replication requires the function of MCM gene products, which participate in ensuring that DNA replication occurs only once in the cell cycle. 1 Initiation Initiation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 DNA dna NOUN NN Number=Sing _ _ _ _ 4 replication replication NOUN NN Number=Sing _ _ _ _ 5 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 function function NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 MCM MCm ADJ JJ Degree=Pos _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 products product NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 participate participate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 in in SCONJ IN _ _ _ _ _ 16 ensuring ensure VERB VBG VerbForm=Ger _ _ _ _ 17 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 18 DNA dna NOUN NN Number=Sing _ _ _ _ 19 replication replication NOUN NN Number=Sing _ _ _ _ 20 occurs occur ADV RB _ _ _ _ _ 21 only only ADV RB _ _ _ _ _ 22 once once ADV RB NumType=Mult _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 7487 # text = Expression of all mammalian genes of the MCM family is induced by growth stimulation, unlike yeast, and the mRNA levels peak at G1/S boundary. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 all all DET DT _ _ _ _ _ 4 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 5 genes gene NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 MCM MCM PROPN NNP Number=Sing _ _ _ _ 9 family family NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 growth growth NOUN NN Number=Sing _ _ _ _ 14 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 unlike unlike ADP IN _ _ _ _ _ 17 yeast yeast NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 22 levels levels NOUN NNS Number=Plur _ _ _ _ 23 peak peak NOUN NN Number=Sing _ _ _ _ 24 at at ADP IN _ _ _ _ _ 25 G1/S G1/S PROPN NNP Number=Sing _ _ _ _ 26 boundary boundary PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 7488 # text = In this study, we examined the transcriptional activities of isolated human MCM gene promoters. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 activities activity NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 MCM MCm NOUN NN Number=Sing _ _ _ _ 14 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 7489 # text = Human MCM5 and MCM6 promoters with mutation in the E2F sites failed in promoter regulation following serum stimulation and exogenous E2F expression. 1 Human human PROPN NNP Number=Sing _ _ _ _ 2 MCM5 MCM5 PROPN NNP Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 MCM6 MCM6 NUM CD NumType=Card _ _ _ _ 5 promoters promoter NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 mutation mutation NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 E2 E2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 F f PROPN NNP Number=Sing _ _ _ _ 12 sites site NOUN NNS Number=Plur _ _ _ _ 13 failed fail VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 regulation regulation NOUN NN Number=Sing _ _ _ _ 17 following follow VERB VBG VerbForm=Ger _ _ _ _ 18 serum serum NOUN NN Number=Sing _ _ _ _ 19 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 22 E2F E2F PROPN NNP Number=Sing _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 7490 # text = In addition, we identified a novel E2F-like sequence in human MCM6 promoter which cooperates with the authentic E2F sites in E2F-dependent regulation. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 novel novel NOUN NN Number=Sing _ _ _ _ 8 E2F E2F NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 like like ADJ JJ Degree=Pos _ _ _ _ 11 sequence sequence NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 MCM6 Mcm6 NOUN NN Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 cooperates cooperate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 authentic authentic ADJ JJ Degree=Pos _ _ _ _ 21 E2 e2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 F for PROPN NNP Number=Sing _ _ _ _ 23 sites site NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 E2F E2F PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 28 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 7491 # text = Forced expression of E2F1 could induce expression of all members of the endogenous MCM genes in rat embryonal fibroblast REF52 cells. 1 Forced forced ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 E2F1 E2f1 PROPN NNP Number=Sing _ _ _ _ 5 could could AUX MD VerbForm=Fin _ _ _ _ 6 induce induce VERB VB VerbForm=Inf _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 all all DET DT _ _ _ _ _ 10 members member NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 14 MCM MCm NOUN NN Number=Sing _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 rat rat NOUN NN Number=Sing _ _ _ _ 18 embryonal embryonal ADV RB _ _ _ _ _ 19 fibroblast fibroblast ADV RBS Degree=Sup _ _ _ _ 20 REF52 Ref52 NUM CD NumType=Card _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 7492 # text = Our results demonstrated that the growth-regulated expression of mammalian MCM5 and MCM6 genes, and presumably other MCM members, is primarily regulated by E2F through binding to multiple E2F sites in the promoters. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 12 MCM5 Mcm5 NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 MCM6 Mcm6 NOUN NN Number=Sing _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 presumably presumably ADV RB _ _ _ _ _ 19 other other ADJ JJ Degree=Pos _ _ _ _ 20 MCM MCm NOUN NN Number=Sing _ _ _ _ 21 members member NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 primarily primarily ADV RB _ _ _ _ _ 25 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 E2F E2F PROPN NNP Number=Sing _ _ _ _ 28 through through SCONJ IN _ _ _ _ _ 29 binding bind VERB VBG VerbForm=Ger _ _ _ _ 30 to to PART TO _ _ _ _ _ 31 multiple multiple VERB VB VerbForm=Inf _ _ _ _ 32 E2 E2 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 F f PROPN NNP Number=Sing _ _ _ _ 34 sites site NOUN NNS Number=Plur _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7493 # text = Document 0030011110 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011110 0030011110 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7494 # text = Cyclosporin 1 Cyclosporin Cyclosporin PROPN NNP Number=Sing _ _ _ _ # sent_id = 7495 # text = A inhibits monocyte tissue factor activation in cardiac transplant recipients. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 inhibits inhibits NOUN NNS Number=Plur _ _ _ _ 3 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 4 tissue tissue NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 cardiac cardiac ADJ JJ Degree=Pos _ _ _ _ 9 transplant transplant NOUN NN Number=Sing _ _ _ _ 10 recipients recipient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7496 # text = BACKGROUND: Fibrin deposition and thrombosis have been implicated in both allograft rejection and vasculopathy after cardiac transplantation. 1 BACKGROUND background ADP IN _ _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Fibrin Fibrin ADJ JJ Degree=Pos _ _ _ _ 4 deposition deposition NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 thrombosis thrombosis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 9 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 both both DET DT _ _ _ _ _ 12 allograft allograft NOUN NN Number=Sing _ _ _ _ 13 rejection rejection NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 vasculopathy vasculopathy NOUN NN Number=Sing _ _ _ _ 16 after after ADP IN _ _ _ _ _ 17 cardiac cardiac ADJ JJ Degree=Pos _ _ _ _ 18 transplantation transplantation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 7497 # text = Because monocytes play a pivotal role in the pathophysiology of intravascular coagulation activation through their ability to synthesize tissue factor (TF), we asked (1) whether monocyte TF activation occurs in cardiac transplant recipients and (2) whether monocyte TF expression is affected by treatment with cyclosporin A (CsA). 1 Because because SCONJ IN _ _ _ _ _ 2 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 3 play play VERB VB VerbForm=Inf _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 pivotal pivotal ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 pathophysiology pathophysiology NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 intravascular intravascular ADJ JJ Degree=Pos _ _ _ _ 12 coagulation coagulation NOUN NN Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 through through ADP IN _ _ _ _ _ 15 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 ability ability NOUN NN Number=Sing _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 synthesize synthesize VERB VB VerbForm=Inf _ _ _ _ 19 tissue tissue NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 TF TF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 26 asked ask VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 1 1 X LS _ _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 whether whether SCONJ IN _ _ _ _ _ 31 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 32 TF TF NOUN NN Number=Sing _ _ _ _ 33 activation activation NOUN NN Number=Sing _ _ _ _ 34 occurs occur NOUN NNS Number=Plur _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 cardiac cardiac ADJ JJ Degree=Pos _ _ _ _ 37 transplant transplant NOUN NN Number=Sing _ _ _ _ 38 recipients recipient NOUN NNS Number=Plur _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 2 2 X LS _ _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 whether whether SCONJ IN _ _ _ _ _ 44 monocyte monocyte VERB VB VerbForm=Inf _ _ _ _ 45 TF TF ADP RP _ _ _ _ _ 46 expression expression NOUN NN Number=Sing _ _ _ _ 47 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 48 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 49 by by ADP IN _ _ _ _ _ 50 treatment treatment NOUN NN Number=Sing _ _ _ _ 51 with with ADP IN _ _ _ _ _ 52 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 53 A a NOUN NN Number=Sing _ _ _ _ 54 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 55 CsA csa NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 7498 # text = METHODS AND RESULTS: 1 METHODS method NOUN NNS Number=Plur _ _ _ _ 2 AND and CCONJ CC _ _ _ _ _ 3 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ # sent_id = 7499 # text = We measured levels of TF activity in peripheral blood mononuclear cells and highly purified monocytes/macrophages from 10 consecutive cardiac transplant recipients and 10 healthy control subjects. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 measured measure VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 levels level NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 TF Tf NOUN NN Number=Sing _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 9 blood blood NOUN NN Number=Sing _ _ _ _ 10 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 highly highly ADV RB _ _ _ _ _ 14 purified purified VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 / / PUNCT , _ _ _ _ SpaceAfter=No 17 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 10 10 NUM CD NumType=Card _ _ _ _ 20 consecutive consecutive ADJ JJ Degree=Pos _ _ _ _ 21 cardiac cardiac NOUN NN Number=Sing _ _ _ _ 22 transplant transplant NOUN NN Number=Sing _ _ _ _ 23 recipients recipient NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 10 10 NUM CD NumType=Card _ _ _ _ 26 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 27 control control NOUN NN Number=Sing _ _ _ _ 28 subjects subject NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 7500 # text = TF activity generated by both unstimulated and endotoxin-stimulated cells was significantly higher in transplant recipients than in control subjects (P<.05). 1 TF Tf ADJ JJ Degree=Pos _ _ _ _ 2 activity activity NOUN NN Number=Sing _ _ _ _ 3 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 both both DET DT _ _ _ _ _ 6 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 endotoxin- endotoxin- SYM NFP _ _ _ _ SpaceAfter=No 9 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 significantly significantly ADV RB _ _ _ _ _ 13 higher higher ADV RBR Degree=Cmp _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 transplant transplant ADJ JJ Degree=Pos _ _ _ _ 16 recipients recipient NOUN NNS Number=Plur _ _ _ _ 17 than than ADP IN _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 control control NOUN NN Number=Sing _ _ _ _ 20 subjects subjects NOUN NNS Number=Plur _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 P p NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 < < PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 .05 .05 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 7501 # text = Increased monocyte TF expression in transplant recipients was shown to be adversely affected by treatment with CsA: TF induction was markedly reduced by CsA serum concentrations reaching peak CsA drug levels. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 3 TF Tf NOUN NN Number=Sing _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 transplant transplant ADJ JJ Degree=Pos _ _ _ _ 7 recipients recipient NOUN NNS Number=Plur _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 adversely adversely ADV RB _ _ _ _ _ 13 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 treatment treatment NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 : : PUNCT : _ _ _ _ _ 19 TF Tf ADJ JJ Degree=Pos _ _ _ _ 20 induction induction NOUN NN Number=Sing _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 markedly markedly ADV RB _ _ _ _ _ 23 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 CsA csa NOUN NN Number=Sing _ _ _ _ 26 serum serum NOUN NN Number=Sing _ _ _ _ 27 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 28 reaching reach VERB VBG VerbForm=Ger _ _ _ _ 29 peak peak NOUN NN Number=Sing _ _ _ _ 30 CsA csa NOUN NN Number=Sing _ _ _ _ 31 drug drug NOUN NN Number=Sing _ _ _ _ 32 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 7502 # text = Inhibition of TF induction in the presence of high CsA blood concentrations was also observed when stimulation of cells was performed with interferon-gamma or interleukin-1beta. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 TF Tf NOUN NN Number=Sing _ _ _ _ 4 induction induction NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 presence presence NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 high high ADJ JJ Degree=Pos _ _ _ _ 10 CsA csa NOUN NN Number=Sing _ _ _ _ 11 blood blood NOUN NN Number=Sing _ _ _ _ 12 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 when when ADV WRB PronType=Int _ _ _ _ 17 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 performed perform VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 gamma gamma NOUN NN Number=Sing _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 7503 # text = As shown by reverse transcription-polymerase chain reaction and electrophoretic mobility shift assay, respectively, treatment with CsA leads to decreased TF mRNA expression and reduced activation of the NF-kappaB transcription factor, which is known to contribute to the induction of the TF promotor in human monocytes. 1 As as SCONJ IN _ _ _ _ _ 2 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 reverse reverse NOUN NN Number=Sing _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 8 chain chain NOUN NN Number=Sing _ _ _ _ 9 reaction reaction NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 12 mobility mobility NOUN NN Number=Sing _ _ _ _ 13 shift shift NOUN NN Number=Sing _ _ _ _ 14 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 treatment treatment NOUN NN Number=Sing _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 CsA csa PROPN NNP Number=Sing _ _ _ _ 21 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 decreased decreased VERB VB VerbForm=Inf _ _ _ _ 24 TF TF PROPN NNP Number=Sing _ _ _ _ 25 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 35 transcription transcription NOUN NN Number=Sing _ _ _ _ 36 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 which which PRON WDT PronType=Rel _ _ _ _ 39 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 40 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 41 to to PART TO _ _ _ _ _ 42 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 43 to to ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 induction induction NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 TF TF PROPN NNP Number=Sing _ _ _ _ 49 promotor promotor NOUN NN Number=Sing _ _ _ _ 50 in in ADP IN _ _ _ _ _ 51 human human ADJ JJ Degree=Pos _ _ _ _ 52 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 7504 # text = CONCLUSIONS: 1 CONCLUSIONS conclusion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 7505 # text = This study demonstrates that TF activation, occurring in mononuclear cells of cardiac transplant recipients, is inhibited by treatment with CsA. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 TF Tf PROPN NNP Number=Sing _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 occurring occurre VERB VBG VerbForm=Ger _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 cardiac cardiac ADJ JJ Degree=Pos _ _ _ _ 14 transplant transplant NOUN NN Number=Sing _ _ _ _ 15 recipients recipient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 treatment treatment NOUN NN Number=Sing _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 7506 # text = Inhibition of monocyte TF induction by CsA may contribute to its successful use in cardiac transplant medicine and might be useful in managing further settings of vascular pathology also known to involve TF expression and NF-kappaB activation. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 4 TF TF NOUN NN Number=Sing _ _ _ _ 5 induction induction NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 CsA csa PROPN NNP Number=Sing _ _ _ _ 8 may may AUX MD VerbForm=Fin _ _ _ _ 9 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 12 successful successful ADJ JJ Degree=Pos _ _ _ _ 13 use use NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 cardiac cardiac ADJ JJ Degree=Pos _ _ _ _ 16 transplant transplant NOUN NN Number=Sing _ _ _ _ 17 medicine medicine NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 might might AUX MD VerbForm=Fin _ _ _ _ 20 be be AUX VB VerbForm=Inf _ _ _ _ 21 useful useful ADJ JJ Degree=Pos _ _ _ _ 22 in in SCONJ IN _ _ _ _ _ 23 managing manag VERB VBG VerbForm=Ger _ _ _ _ 24 further further ADJ JJ Degree=Pos _ _ _ _ 25 settings setting NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 28 pathology pathology NOUN NN Number=Sing _ _ _ _ 29 also also ADV RB _ _ _ _ _ 30 known known VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 involve involve ADJ JJ Degree=Pos _ _ _ _ 33 TF TF PROPN NNP Number=Sing _ _ _ _ 34 expression expression PROPN NNP Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 39 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7507 # text = Document 0030011112 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011112 0030011112 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7508 # text = c-Maf induces monocytic differentiation and apoptosis in bipotent myeloid progenitors. 1 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 Maf Maf NOUN NN Number=Sing _ _ _ _ 4 induces induce NOUN NNS Number=Plur _ _ _ _ 5 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 6 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 bipotent bipotent ADJ JJ Degree=Pos _ _ _ _ 11 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 12 progenitors progenitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7509 # text = The transcriptional mechanisms that drive colony-forming unit granulocyte-macrophage (CFU-GM) myeloid progenitors to differentiate into cells of either the granulocytic or monocytic lineage are not fully understood. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 3 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 drive drive VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 forming forming VERB VBG VerbForm=Ger _ _ _ _ 9 unit unit NOUN NN Number=Sing _ _ _ _ 10 granulocyte- granulocyte- SYM SYM _ _ _ _ SpaceAfter=No 11 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 CFU CFU PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 18 progenitors progenitor NOUN NNS Number=Plur _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 differentiate differentiate VERB VB VerbForm=Inf _ _ _ _ 21 into into ADP IN _ _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 either either CCONJ CC _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 29 lineage lineage NOUN NN Number=Sing _ _ _ _ 30 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 not not PART RB _ _ _ _ _ 32 fully fully ADV RB _ _ _ _ _ 33 understood understand VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 7510 # text = We have shown that the c-Maf and c-Myb transcription factors physically interact in myeloid cells to form inhibitory complexes that hinder transactivation of c-Myb target genes through direct binding to Myb consensus sites. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 Maf Maf NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 Myb Myb NOUN NN Number=Sing _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factors factor NOUN NNS Number=Plur _ _ _ _ 15 physically physically ADV RB _ _ _ _ _ 16 interact interact ADJ JJ Degree=Pos _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 form form VERB VB VerbForm=Inf _ _ _ _ 22 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 23 complexes complexe NOUN NNS Number=Plur _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 hinder hinder VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 Myb Myb NOUN NN Number=Sing _ _ _ _ 31 target target NOUN NN Number=Sing _ _ _ _ 32 genes gene NOUN NNS Number=Plur _ _ _ _ 33 through through ADP IN _ _ _ _ _ 34 direct direct ADJ JJ Degree=Pos _ _ _ _ 35 binding binding VERB VBG VerbForm=Ger _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 Myb Myb PROPN NNP Number=Sing _ _ _ _ 38 consensus consensus NOUN NN Number=Sing _ _ _ _ 39 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 7511 # text = These complexes arise in a developmentally regulated pattern, peaking at the promyelocyte stage, or in cell model systems, appearing soon after the induction of monocytic differentiation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 complexes complexe NOUN NNS Number=Plur _ _ _ _ 3 arise arise VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 developmentally developmentally ADV RB _ _ _ _ _ 7 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 pattern pattern NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 peaking peak VERB VBG VerbForm=Ger _ _ _ _ 11 at at ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 promyelocyte promyelocyte NOUN NN Number=Sing _ _ _ _ 14 stage stage NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 model model NOUN NN Number=Sing _ _ _ _ 20 systems system NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 appearing appear VERB VBG VerbForm=Ger _ _ _ _ 23 soon soon ADV RB Degree=Pos _ _ _ _ 24 after after ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 induction induction NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 29 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 7512 # text = We wished to determine if this developmentally related interaction is a consequence of myeloid differentiation or an intrinsic differentiating stimulus. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 wished wish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 determine determine VERB VB VerbForm=Inf _ _ _ _ 5 if if SCONJ IN _ _ _ _ _ 6 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 7 developmentally developmentally ADV RB _ _ _ _ _ 8 related related ADJ JJ Degree=Pos _ _ _ _ 9 interaction interaction NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 consequence consequence NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 intrinsic intrinsic ADJ JJ Degree=Pos _ _ _ _ 19 differentiating differentiating NOUN NN Number=Sing _ _ _ _ 20 stimulus stimulus NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 7513 # text = Because the elevated Myb:Maf status seen in differentiating cells can be recapitulated by overexpression of c-Maf in myeloid cell lines, we inducibly expressed the c-Maf cDNA in 2 bipotent human myeloid progenitor cells. 1 Because because SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 Myb Myb NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 : : PUNCT : _ _ _ _ SpaceAfter=No 6 Maf Maf ADJ JJ Degree=Pos _ _ _ _ 7 status status NOUN NN Number=Sing _ _ _ _ 8 seen see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 differentiating differentiating ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 can can AUX MD VerbForm=Fin _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 recapitulated recapitulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 Maf Maf NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 27 inducibly inducibly ADV RB _ _ _ _ _ 28 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 c- c- SYM NFP _ _ _ _ SpaceAfter=No 31 Maf Maf PROPN NNP Number=Sing _ _ _ _ 32 cDNA cDNA PROPN NNP Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 2 2 NUM CD NumType=Card _ _ _ _ 35 bipotent bipotent ADJ JJ Degree=Pos _ _ _ _ 36 human human ADJ JJ Degree=Pos _ _ _ _ 37 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 38 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 7514 # text = Elevated levels of c-Maf protein led to marked increases in Myb:Maf complexes and the accumulation of monocyte/macrophage cells, followed by eventual programmed cell death. 1 Elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 Maf Maf NOUN NN Number=Sing _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 led lead VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 increases increase NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 Myb Myb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 : : PUNCT : _ _ _ _ SpaceAfter=No 15 Maf Maf ADJ JJ Degree=Pos _ _ _ _ 16 complexes complex NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 / / PUNCT , _ _ _ _ SpaceAfter=No 23 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 eventual eventual ADJ JJ Degree=Pos _ _ _ _ 29 programmed program VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 7515 # text = Analysis of targets that could mediate these phenotypic changes indicated that c-Maf likely plays a key role in myeloid cell development through dual mechanisms; inhibition of a select set of c-Myb regulated targets, such as Bcl-2 and CD13/APN, coupled with the activation of as yet undefined differentiation-promoting genes. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 targets target NOUN NNS Number=Plur _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 could could AUX MD VerbForm=Fin _ _ _ _ 6 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 phenotypic phenotypic ADJ JJ Degree=Pos _ _ _ _ 9 changes change NOUN NNS Number=Plur _ _ _ _ 10 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 c- c- SYM NFP _ _ _ _ SpaceAfter=No 13 Maf Maf PROPN NNP Number=Sing _ _ _ _ 14 likely likely ADV RB _ _ _ _ _ 15 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 key key ADJ JJ Degree=Pos _ _ _ _ 18 role role NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 development development NOUN NN Number=Sing _ _ _ _ 23 through through ADP IN _ _ _ _ _ 24 dual dual ADJ JJ Degree=Pos _ _ _ _ 25 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 ; ; PUNCT , _ _ _ _ _ 27 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 select select ADJ JJ Degree=Pos _ _ _ _ 31 set set NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 Myb Myb NOUN NN Number=Sing _ _ _ _ 36 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 targets target NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 such such ADJ JJ Degree=Pos _ _ _ _ 40 as as ADP IN _ _ _ _ _ 41 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 2 2 NUM CD NumType=Card _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 13/ 13ith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 47 APN APN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 coupled couple VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 with with ADP IN _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 activation activation NOUN NN Number=Sing _ _ _ _ 53 of of ADP IN _ _ _ _ _ 54 as as SCONJ IN _ _ _ _ _ 55 yet yet ADV RB _ _ _ _ _ 56 undefined undefin VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 57 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 59 promoting promote VERB VBG VerbForm=Ger _ _ _ _ 60 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7516 # text = Document 0030011114 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011114 0030011114 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7517 # text = Activation of transcription factor NF-kappa B by phagocytic stimuli in human neutrophils. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 phagocytic phagocytic ADJ JJ Degree=Pos _ _ _ _ 11 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7518 # text = Phagocytosis represents an important physiological trigger for the inducible expression of several genes in human neutrophils. 1 Phagocytosis Phagocytosis PROPN NNP Number=Sing _ _ _ _ 2 represents represent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 important important ADJ JJ Degree=Pos _ _ _ _ 5 physiological physiological ADJ JJ Degree=Pos _ _ _ _ 6 trigger trigger NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 several several ADJ JJ Degree=Pos _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 7519 # text = Here, we report that a DNA-binding activity primarily consisting of the classical NF-kappa B heterodimer, p50/RelA, is induced in phagocytosing neutrophils. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 primarily primarily ADV RB _ _ _ _ _ 12 consisting consiste VERB VBG VerbForm=Ger _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 classical classical ADJ JJ Degree=Pos _ _ _ _ 16 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ _ 20 heterodimer heterodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 / / PUNCT , _ _ _ _ SpaceAfter=No 24 RelA Rela NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 phagocytosing phagocytose VERB VBG VerbForm=Ger _ _ _ _ 30 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 7520 # text = Under these conditions, NF-kappa B activation was found to be a rapid and transient response, reaching a maximum by 10-15 min, and returning to near-basal levels by 30 min. 1 Under under ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 transient transient ADJ JJ Degree=Pos _ _ _ _ 18 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 reaching reach VERB VBG VerbForm=Ger _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 maximum maximum NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - SYM SYM _ _ _ _ SpaceAfter=No 26 15 15 NUM CD NumType=Card _ _ _ _ 27 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 returning return VERB VBG VerbForm=Ger _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 near near ADV RB _ _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 basal basal ADJ JJ Degree=Pos _ _ _ _ 35 levels level NOUN NNS Number=Plur _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 30 30 NUM CD NumType=Card _ _ _ _ 38 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 7521 # text = In neutrophils undergoing the phagocytosis of opsonized yeasts, the onset of NF-kappa B activation was paralleled by a decline in immunoreactive I kappa B-alpha protein levels, and the cellular 1 In in ADP IN _ _ _ _ _ 2 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 3 undergoing undergo VERB VBG VerbForm=Ger _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 phagocytosis phagocytosis NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 opsonized opsonized ADJ JJ Degree=Pos _ _ _ _ 8 yeasts yeast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 onset onset NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 paralleled parallel VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 decline decline NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 immunoreactive immunoreactive ADJ JJ Degree=Pos _ _ _ _ 25 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 26 kappa kappa X GW _ _ _ _ _ 27 B- B- X GW _ _ _ _ SpaceAfter=No 28 alpha alpha X GW _ _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ _ 30 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 cellular cellular NOUN NN Number=Sing _ _ _ _ # sent_id = 7522 # text = I kappa B-alpha pool was replenished by 30 min, in agreement with our gel shift data. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa X GW _ _ _ _ _ 3 B- B- X GW _ _ _ _ SpaceAfter=No 4 alpha alpha X GW _ _ _ _ _ 5 pool pool NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 replenished replenish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 30 30 NUM CD NumType=Card _ _ _ _ 10 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 agreement agreement NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 16 gel gel NOUN NN Number=Sing _ _ _ _ 17 shift shift NOUN NN Number=Sing _ _ _ _ 18 data data NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 7523 # text = We conclude that NF-kappa B activation could constitute one of the mechanisms whereby the expression of kappa B-responsive genes is enhanced in phagocytosing neutrophils. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 could could AUX MD VerbForm=Fin _ _ _ _ 10 constitute constitute VERB VB VerbForm=Inf _ _ _ _ 11 one one NUM CD NumType=Card _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 15 whereby whereby ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 23 genes gene NOUN NNS Number=Plur _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 phagocytosing phagocytose VERB VBG VerbForm=Ger _ _ _ _ 28 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 7524 # text = To our knowledge, this represents the first demonstration that phagocytic stimuli can induce NF-kappa B activation in human neutrophils. 1 To to ADP IN _ _ _ _ _ 2 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 3 knowledge knowledge NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 6 represents represent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 9 demonstration demonstration NOUN NN Number=Sing _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 phagocytic phagocytic ADJ JJ Degree=Pos _ _ _ _ 12 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 13 can can AUX MD VerbForm=Fin _ _ _ _ 14 induce induce VERB VB VerbForm=Inf _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7525 # text = Document 0030011122 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011122 0030011122 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7526 # text = Binding of erythroid and non-erythroid nuclear proteins to the silencer of the human epsilon-globin-encoding gene. 1 Binding binding NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 non-erythroid non-erythroid ADJ JJ Degree=Pos _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 proteins protein NOUN NNS Number=Plur _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 silencer silencer NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 epsilon epsilon NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 globin globin NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 encoding encoding NOUN NN Number=Sing _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7527 # text = To clarify the molecular mechanisms involved in the developmental control of hemoglobin-encoding genes we have been studying the expression of these genes in human cells in continuous culture. 1 To to PART TO _ _ _ _ _ 2 clarify clarify VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 5 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 6 involved involved ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 10 control control NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 hemoglobin hemoglobin NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 encoding encoding NOUN NN Number=Sing _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ _ 16 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 17 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 19 studying study VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 24 genes gene NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 continuous continuous ADJ JJ Degree=Pos _ _ _ _ 30 culture culture NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 7528 # text = We have previously reported the presence of a transcriptional control element with the properties of a silencer extending from -392 to -177 bp relative to the cap site of the human epsilon-globin-encoding gene [Cao et al., 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 reported report VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 presence presence NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 10 control control NOUN NN Number=Sing _ _ _ _ 11 element element NOUN NN Number=Sing _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 properties property NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 silencer silencer NOUN NN Number=Sing _ _ _ _ 18 extending extend VERB VBG VerbForm=Ger _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 -392 -392 NUM CD NumType=Card _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 - - SYM SYM _ _ _ _ SpaceAfter=No 23 177 177 NUM CD NumType=Card _ _ _ _ 24 bp bp NOUN NN Number=Sing _ _ _ _ 25 relative relative ADV RB _ _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 cap cap NOUN NN Number=Sing _ _ _ _ 29 site site NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 human human ADJ JJ Degree=Pos _ _ _ _ 33 epsilon epsilon NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 globin globin NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 encoding encoding NOUN NN Number=Sing _ _ _ _ 38 gene gene NOUN NN Number=Sing _ _ _ _ 39 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 Cao Cao PROPN NNP Number=Sing _ _ _ _ 41 et et X FW _ _ _ _ _ 42 al. al. X FW _ _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ # sent_id = 7529 # text = Proc.Natl.Acad.Sci.USA 86 (1989) 5306-5309]. 1 Proc.Natl.Acad.Sci.USA Proc.Natl.Acad.Sci.USA PROPN NNP Number=Sing _ _ _ _ 2 86 86 NUM CD NumType=Card _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 1989 1989 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 5306 5306 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 5309 5309 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 7530 # text = We also showed that this silencer has stronger inhibitory activity in HeLa cells, as compared to K562 human erythroleukemia cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 silencer silencer NOUN NN Number=Sing _ _ _ _ 7 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 stronger stronger ADJ JJR Degree=Cmp _ _ _ _ 9 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 HeLa Hela PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 as as SCONJ IN _ _ _ _ _ 16 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 K562 K562 NUM CD NumType=Card _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 erythroleukemia erythroleukemia NOUN NN Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 7531 # text = Using deletion mutants and cis-cloned synthetic oligodeoxyribonucleotides in transient expression assays, nucleotide sequences responsible for this effect have now been further delimited to 44 bp located from -294 to -251 bp. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 deletion deletion NOUN NN Number=Sing _ _ _ _ 3 mutants mutant NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 9 oligodeoxyribonucleotides oligodeoxyribonucleotide NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 transient transient ADJ JJ Degree=Pos _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 nucleotide nucleotide ADJ JJ Degree=Pos _ _ _ _ 16 sequences sequence NOUN NNS Number=Plur _ _ _ _ 17 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 20 effect effect NOUN NN Number=Sing _ _ _ _ 21 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 now now ADV RB _ _ _ _ _ 23 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 24 further further ADV RB _ _ _ _ _ 25 delimited delimit ADJ JJ Degree=Pos _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 44 44 NUM CD NumType=Card _ _ _ _ 28 bp bp NOUN NN Number=Sing _ _ _ _ 29 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 from from ADP IN _ _ _ _ _ 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 294 294 NUM CD NumType=Card _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 - - SYM SYM _ _ _ _ SpaceAfter=No 35 251 251 NUM CD NumType=Card _ _ _ _ 36 bp bp NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 7532 # text = Gel electrophoresis mobility shift assays and DNaseI footprinting assays demonstrate that these negative regulatory sequences are recognized differently by proteins present in nuclear extracts obtained from HeLa and K562 cells. 1 Gel gel VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 electrophoresis electrophoresis DET DT Number=Sing|PronType=Dem _ _ _ _ 3 mobility mobility NOUN NN Number=Sing _ _ _ _ 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assays assay NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 DNaseI DNaseI NOUN NNS Number=Plur _ _ _ _ 8 footprinting footprint VERB VBG VerbForm=Ger _ _ _ _ 9 assays assay NOUN NNS Number=Plur _ _ _ _ 10 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 13 negative negative ADJ JJ Degree=Pos _ _ _ _ 14 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 15 sequences sequence NOUN NNS Number=Plur _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 recognized recognize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 differently differently ADV RB _ _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 proteins protein NOUN NNS Number=Plur _ _ _ _ 21 present present ADJ JJ Degree=Pos _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 24 extracts extract NOUN NNS Number=Plur _ _ _ _ 25 obtained obtain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 from from ADP IN _ _ _ _ _ 27 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 K562 K562 NUM CD NumType=Card _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 7533 # text = Two binding proteins are detected in K562 nuclear extracts, while only one is found in extracts from HeLa cells. 1 Two two NUM CD NumType=Card _ _ _ _ 2 binding binding ADJ JJ Degree=Pos _ _ _ _ 3 proteins protein NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 K562 K562 NUM CD NumType=Card _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 while while SCONJ IN _ _ _ _ _ 12 only only ADV RB _ _ _ _ _ 13 one one NUM CD NumType=Card _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 extracts extract NOUN NNS Number=Plur _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 7534 # text = Possible mechanisms by which these proteins may regulate transcription of the epsilon-globin-encoding gene in erythroid and non-erythroid cells are discussed. 1 Possible possible ADJ JJ Degree=Pos _ _ _ _ 2 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 proteins protein NOUN NNS Number=Plur _ _ _ _ 7 may may AUX MD VerbForm=Fin _ _ _ _ 8 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 epsilon epsilon NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 globin-encoding globin-encoding NOUN NN Number=Sing _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 non-erythroid non-erythroid ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 discussed discuss VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7535 # text = Document 0030011124 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011124 0030011124 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7536 # text = cDNA cloning of a NGFI-B/nur77-related transcription factor from an apoptotic human T cell line. 1 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 2 cloning cloning NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 NGFI NGFI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 nur77-related nur77-related ADJ JJ Degree=Pos _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 T T PROPN NNP Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7537 # text = A human T lymphoid cell line, PEER, dies by apoptosis in the presence of PMA and calcium ionophore. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 lymphoid lymphoid NOUN NN Number=Sing _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 PEER peer NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 dies die VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 presence presence NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 PMA PMA PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 calcium calcium PROPN NNP Number=Sing _ _ _ _ 20 ionophore ionophore ADV RB _ _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 7538 # text = A new gene, TINUR, was cloned from apoptotic PEER cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 new new ADJ JJ Degree=Pos _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 TINUR Tinur NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 cloned clon VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 11 PEER peer NOUN NN Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 7539 # text = The expression of the TINUR gene is induced within 1 h after the cross-linking of the T cell 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 TINUR TINUR PROPN NNP Number=Sing _ _ _ _ 6 gene gene PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 within within ADP IN _ _ _ _ _ 10 1 1 NUM CD NumType=Card _ _ _ _ 11 h h NOUN NN Number=Sing _ _ _ _ 12 after after ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 -linking -linking NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 T T PROPN NNP Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ # sent_id = 7540 # text = Ag receptor complex. 1 Ag ag ADJ JJ Degree=Pos _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ _ 3 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ _ # sent_id = 7541 # text = TINUR belongs to the NGFI-B/nur77 family of the steroid receptor superfamily and is an orphan receptor. 1 TINUR Tinur PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 belongs belong VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 NGFI Ngfi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 nur77 nur77 NUM CD NumType=Card _ _ _ _ 10 family family NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 steroid steroid ADJ JJ Degree=Pos _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 superfamily superfamily ADV RB _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 orphan orphan ADJ JJ Degree=Pos _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 7542 # text = TINUR binds to the same DNA sequence as NGFI-B/nur77. 1 TINUR Tinur PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 same same ADJ JJ Degree=Pos _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ _ 7 sequence sequence NOUN NN Number=Sing _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 NGFI NGFI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 13 nur77 nur77 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 7543 # text = We also propose that the NGFI-B/nur77 family can be classified into two subtypes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 NGFI Ngfi NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 10 nur77 nur77 NUM CD NumType=Card _ _ _ _ 11 family family NOUN NN Number=Sing _ _ _ _ 12 can can AUX MD VerbForm=Fin _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 classified classify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 into into ADP IN _ _ _ _ _ 16 two two NUM CD NumType=Card _ _ _ _ 17 subtypes subtype NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7544 # text = Document 0030011128 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011128 0030011128 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7545 # text = Constitutive nuclear NF-kappa B in cells of the monocyte lineage. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 monocyte monocyte ADJ JJ Degree=Pos _ _ _ _ 12 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7546 # text = In monocytes, the nuclear factor NF-kappa B has been invoked as an important transcription factor in the expression of cytokine genes, of cell-surface receptors and in the expression of human immunodeficiency virus. 1 In in ADP IN _ _ _ _ _ 2 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 13 invoked invok VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 important important ADJ JJ Degree=Pos _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 24 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 surface surface NOUN NN Number=Sing _ _ _ _ 30 receptors receptor NOUN NNS Number=Plur _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 human human ADJ JJ Degree=Pos _ _ _ _ 37 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 38 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 7547 # text = In such cells, DNA binding activity of NF-kappa B can be detected without intentional stimulation. 1 In in ADP IN _ _ _ _ _ 2 such such ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 DNA dna NOUN NN Number=Sing _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 can can AUX MD VerbForm=Fin _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 without without ADP IN _ _ _ _ _ 17 intentional intentional ADJ JJ Degree=Pos _ _ _ _ 18 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 7548 # text = In our studies, cells of the human monocytic line Mono Mac 6, cultured in medium containing fetal-calf serum and low levels of lipopolysaccharide (LPS), also exhibit such 'constitutive' NF-kappa B, as demonstrated by mobility-shift analysis of nuclear extracts. 1 In in ADP IN _ _ _ _ _ 2 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 10 line line NOUN NN Number=Sing _ _ _ _ 11 Mono Mono PROPN NNP Number=Sing _ _ _ _ 12 Mac Mac PROPN NNP Number=Sing _ _ _ _ 13 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 cultured culture VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 medium medium ADJ JJ Degree=Pos _ _ _ _ 18 containing containing VERB VBG VerbForm=Ger _ _ _ _ 19 fetal fetal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 calf calf NOUN NN Number=Sing _ _ _ _ 22 serum serum NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 low low ADJ JJ Degree=Pos _ _ _ _ 25 levels level NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 LPS Lp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 also also ADV RB _ _ _ _ _ 33 exhibit exhibit VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 34 such such ADJ JJ Degree=Pos _ _ _ _ 35 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 36 constitutive constitutive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 ' ' PUNCT '' _ _ _ _ _ 38 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 kappa kappa NOUN NN Number=Sing _ _ _ _ 41 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 as as SCONJ IN _ _ _ _ _ 44 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 by by ADP IN _ _ _ _ _ 46 mobility mobility NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 shift shift NOUN NN Number=Sing _ _ _ _ 49 analysis analysis NOUN NN Number=Sing _ _ _ _ 50 of of ADP IN _ _ _ _ _ 51 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 52 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 7549 # text = This nuclear NF-kappa B was still present when contaminant LPS was removed by ultrafiltration and when serum was omitted. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 still still ADV RB _ _ _ _ _ 9 present present ADJ JJ Degree=Pos _ _ _ _ 10 when when ADV WRB PronType=Int _ _ _ _ 11 contaminant contaminant ADJ JJ Degree=Pos _ _ _ _ 12 LPS Lps PROPN NNP Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 removed remove VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 ultrafiltration ultrafiltration NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 when when ADV WRB PronType=Int _ _ _ _ 19 serum serum NOUN NN Number=Sing _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 omitted omit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 7550 # text = Protein-DNA complexes of constitutive NF-kappa B are similar in mobility to the LPS-induced NF-kappa B and both are recognized by an antibody specific to the p50 subunit of NF-kappa B. 1 Protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 DNA dna NOUN NN Number=Sing _ _ _ _ 4 complexes complex NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 7 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 similar similar ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 mobility mobility NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappa kappa PROPN NNP Number=Sing _ _ _ _ 23 B b PROPN NNP Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 both both CCONJ CC _ _ _ _ _ 26 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 recognized recognize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 antibody antibody ADJ JJ Degree=Pos _ _ _ _ 31 specific specific ADJ JJ Degree=Pos _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 p50 p50 NOUN NN Number=Sing _ _ _ _ 35 subunit subunit NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 kappa kappa PROPN NNP Number=Sing _ _ _ _ 40 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 7551 # text = By contrast, treatment of cells with pyrrolidine dithiocarbamate (PDTC) will only block LPS-induced NF-kappa B, but not the constitutive binding protein. 1 By by ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 treatment treatment NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 pyrrolidine pyrrolidine NOUN NN Number=Sing _ _ _ _ 9 dithiocarbamate dithiocarbamate NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 PDTC PDTC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 will will AUX MD VerbForm=Fin _ _ _ _ 14 only only ADV RB _ _ _ _ _ 15 block block VERB VB VerbForm=Inf _ _ _ _ 16 LPS Lps NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa PROPN NNP Number=Sing _ _ _ _ 22 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 but but CCONJ CC _ _ _ _ _ 25 not not ADV RB _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 28 binding binding VERB VBG VerbForm=Ger _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 7552 # text = Using LPS-free and serum-free conditions, constitutive NF-kappa B can be detected in different cell lines of the monocytic lineage (HL60, U937, THP-1, Mono Mac 1 and Mono Mac 6), but not in Molt 4 T cells or K562 stem cells. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 LPS Lps ADV RB _ _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 free free ADJ JJ Degree=Pos _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 serum- serum- SYM NFP _ _ _ _ SpaceAfter=No 7 free free ADJ JJ Degree=Pos _ _ _ _ 8 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 11 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 can can AUX MD VerbForm=Fin _ _ _ _ 16 be be AUX VB VerbForm=Inf _ _ _ _ 17 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 different different ADJ JJ Degree=Pos _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 lines line NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 25 lineage lineage NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 HL60 HL60 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 U937 U937 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 Mono Mono PROPN NNP Number=Sing _ _ _ _ 36 Mac Mac PROPN NNP Number=Sing _ _ _ _ 37 1 1 NUM CD NumType=Card _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 Mono Mono PROPN NNP Number=Sing _ _ _ _ 40 Mac Mac PROPN NNP Number=Sing _ _ _ _ 41 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 but but CCONJ CC _ _ _ _ _ 45 not not ADV RB _ _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 Molt Molt PROPN NNP Number=Sing _ _ _ _ 48 4 4 NUM CD NumType=Card _ _ _ _ 49 T t PROPN NNP Number=Sing _ _ _ _ 50 cells cell NOUN NNS Number=Plur _ _ _ _ 51 or or CCONJ CC _ _ _ _ _ 52 K562 K562 NUM CD NumType=Card _ _ _ _ 53 stem stem NOUN NN Number=Sing _ _ _ _ 54 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 7553 # text = When ordered according to stage of maturation, the amount of constitutive NF-kappa B was not increased in more mature cell lines. 1 When when ADV WRB PronType=Int _ _ _ _ 2 ordered order VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 according accord VERB VBG VerbForm=Ger _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 stage stage NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 maturation maturation NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 amount amount NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B b PROPN NNP Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 not not PART RB _ _ _ _ _ 19 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 more more ADJ JJR Degree=Cmp _ _ _ _ 22 mature mature ADJ JJ Degree=Pos _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 7554 # text = Furthermore, when inducing differentiation in Mono Mac 6 cells, with vitamin D3, no change in constitutive or inducible NF-kappa B can be detected. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 when when ADV WRB PronType=Int _ _ _ _ 4 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 5 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 Mono Mono PROPN NNP Number=Sing _ _ _ _ 8 Mac Mac PROPN NNP Number=Sing _ _ _ _ 9 6 6 NUM CD NumType=Card _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 vitamin vitamin NOUN NN Number=Sing _ _ _ _ 14 D3 D3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 no no DET DT _ _ _ _ _ 17 change change NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ _ 26 can can AUX MD VerbForm=Fin _ _ _ _ 27 be be AUX VB VerbForm=Inf _ _ _ _ 28 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 7555 # text = Analysis of primary cells revealed substantial constitutive NF-kappa B-binding activity in blood monocytes, pleural macrophages and alveolar macrophages. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 primary primary ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 substantial substantial ADJ JJ Degree=Pos _ _ _ _ 7 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 8 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 binding binde VERB VBG VerbForm=Ger _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 blood blood NOUN NN Number=Sing _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 pleural pleural ADJ JJ Degree=Pos _ _ _ _ 19 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 alveolar alveolar ADJ JJ Degree=Pos _ _ _ _ 22 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 7556 # text = The constitutive NF-kappa B appears to be functionally active, since a low level of tumour necrosis factor (TNF) transcript is detectable in monocytes, and this level can be increased by blocking transcript degradation using cycloheximide. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 3 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 functionally functionally ADV RB _ _ _ _ _ 11 active active ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 since since ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 low low ADJ JJ Degree=Pos _ _ _ _ 16 level level NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 tumour tumour NOUN NN Number=Sing _ _ _ _ 19 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 transcript transcript NOUN NN Number=Sing _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 32 level level NOUN NN Number=Sing _ _ _ _ 33 can can AUX MD VerbForm=Fin _ _ _ _ 34 be be AUX VB VerbForm=Inf _ _ _ _ 35 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 by by SCONJ IN _ _ _ _ _ 37 blocking block VERB VBG VerbForm=Ger _ _ _ _ 38 transcript transcript ADJ JJ Degree=Pos _ _ _ _ 39 degradation degradation NOUN NN Number=Sing _ _ _ _ 40 using use VERB VBG VerbForm=Ger _ _ _ _ 41 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 7557 # text = The level of constitutive NF-kappa B in these cells is variable and is frequently found to be lower in the more mature macrophages. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 level level NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 5 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 variable variable ADJ JJ Degree=Pos _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 frequently frequently ADV RB _ _ _ _ _ 17 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 lower lower ADJ JJR Degree=Cmp _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 more more ADV RBR _ _ _ _ _ 24 mature mature ADJ JJ Degree=Pos _ _ _ _ 25 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 7558 # text = Constitutive NF-kappa B was not maintained by autocrine action of cytokines TNF, interleukin 6, interleukin 10, granulocyte-macrophage colony-stimulating factor or macrophage colony-stimulating factor, since neutralizing antibodies did not reduce constitutive DNA-binding activity. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 maintained maintain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 autocrine autocrine NOUN NN Number=Sing _ _ _ _ 11 action action NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 14 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 17 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 20 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 25 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 stimulating stimulate VERB VBG VerbForm=Ger _ _ _ _ 28 factor factor NOUN NN Number=Sing _ _ _ _ 29 or or CCONJ CC _ _ _ _ _ 30 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 31 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 34 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 since since SCONJ IN _ _ _ _ _ 37 neutralizing neutralize VERB VBG VerbForm=Ger _ _ _ _ 38 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 39 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 40 not not PART RB _ _ _ _ _ 41 reduce reduce VERB VB VerbForm=Inf _ _ _ _ 42 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 43 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 binding binding VERB VBG VerbForm=Ger _ _ _ _ 46 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 7559 # text = Furthermore, blockade of prostaglandin or leukotriene biosynthesis did not affect constitutive NF-kappa B. (ABSTRACT TRUNCATED AT 400 WORDS) 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 blockade blockade NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 prostaglandin prostaglandin NOUN NN Number=Sing _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 leukotriene leukotriene NOUN NN Number=Sing _ _ _ _ 8 biosynthesis biosynthesis NOUN NN Number=Sing _ _ _ _ 9 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 affect affect VERB VB VerbForm=Inf _ _ _ _ 12 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 13 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 ABSTRACT Abstract ADV RB _ _ _ _ _ 20 TRUNCATED tRUNCATEd VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 21 AT at ADV RB _ _ _ _ _ 22 400 400 NUM CD NumType=Card _ _ _ _ 23 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7560 # text = Document 0030011130 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011130 0030011130 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7561 # text = In vivo anergized CD4+ T cells express perturbed AP-1 and NF-kappa B transcription factors. 1 In in ADP IN _ _ _ _ _ 2 vivo vivo NOUN NN Number=Sing _ _ _ _ 3 anergized anergize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 + + SYM SYM _ _ _ _ _ 6 T t NUM CD NumType=Card _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 express express ADJ JJ Degree=Pos _ _ _ _ 9 perturbed pertur VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7562 # text = Anergy is a major mechanism to ensure antigen-specific tolerance in T lymphocytes in the adult. 1 Anergy Anergy PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 major major ADJ JJ Degree=Pos _ _ _ _ 5 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 ensure ensure VERB VB VerbForm=Inf _ _ _ _ 8 antigen antigen ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 specific specific ADJ JJ Degree=Pos _ _ _ _ 11 tolerance tolerance NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 adult adult NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 7563 # text = In vivo, anergy has mainly been studied at the cellular level. 1 In in ADP IN _ _ _ _ _ 2 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 anergy anergy NOUN NN Number=Sing _ _ _ _ 5 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 mainly mainly ADV RB _ _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 at at ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 12 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 7564 # text = In this study, we used the T-cell-activating superantigen staphylococcal enterotoxin A (SEA) to investigate molecular mechanisms of T-lymphocyte anergy in vivo. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 activating activate NOUN NN Number=Sing _ _ _ _ 12 superantigen superantigen NOUN NN Number=Sing _ _ _ _ 13 staphylococcal staphylococcal NOUN NN Number=Sing _ _ _ _ 14 enterotoxin enterotoxin NOUN NN Number=Sing _ _ _ _ 15 A a NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 SEA Sea NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 21 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 22 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 26 anergy anergy NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 7565 # text = Injection of SEA to adult mice activates CD4+ T cells expressing certain T-cell receptor (TCR) variable region beta-chain families and induces strong and rapid production of interleukin 2 (IL-2). 1 Injection injection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 SEA Sea NOUN NN Number=Sing _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 adult adult VERB VB VerbForm=Inf _ _ _ _ 6 mice mouse NOUN NN Number=Sing _ _ _ _ 7 activates activate NOUN NNS Number=Plur _ _ _ _ 8 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 + + SYM SYM _ _ _ _ _ 10 T t NUM CD NumType=Card _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 13 certain certain ADJ JJ Degree=Pos _ _ _ _ 14 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 variable variable ADJ JJ Degree=Pos _ _ _ _ 21 region region NOUN NN Number=Sing _ _ _ _ 22 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 chain chain NOUN NN Number=Sing _ _ _ _ 25 families family NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 induces induces NOUN NNS Number=Plur _ _ _ _ 28 strong strong ADJ JJ Degree=Pos _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 31 production production NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 34 2 2 NUM CD NumType=Card _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 7566 # text = In contrast, repeated injections of SEA cause CD4+ T-cell deletion and anergy in the remaining CD4+ T cells, characterized by reduced expression of IL-2 at mRNA and protein levels. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 repeated repeat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 injections injection NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 SEA Sea NOUN NN Number=Sing _ _ _ _ 8 cause cause NOUN NN Number=Sing _ _ _ _ 9 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 + + SYM SYM _ _ _ _ _ 11 T- T- SYM SYM _ _ _ _ SpaceAfter=No 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 deletion deletion NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 anergy anergy NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 remaining remaining ADJ JJ Degree=Pos _ _ _ _ 19 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 + + SYM SYM _ _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ _ 32 at at ADP IN _ _ _ _ _ 33 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 protein protein NOUN NN Number=Sing _ _ _ _ 36 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 7567 # text = We analyzed expression of AP-1, NF-kappa B, NF-AT, and octamer binding transcription factors, which are known to be involved in the regulation of IL-2 gene promoter activity. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa PROPN NNP Number=Sing _ _ _ _ 12 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 AT at PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 octamer octamer ADV RBR Degree=Cmp _ _ _ _ 20 binding bind VERB VBG VerbForm=Ger _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 be be AUX VB VerbForm=Inf _ _ _ _ 29 involved involved VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 regulation regulation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 2 2 NUM CD NumType=Card _ _ _ _ 37 gene gene NOUN NN Number=Sing _ _ _ _ 38 promoter promoter NOUN NN Number=Sing _ _ _ _ 39 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 7568 # text = Large amounts of AP-1 and NF-kappa B and significant quantities of NF-AT were induced in SEA-activated CD4+ spleen T cells, whereas Oct-1 and Oct-2 DNA binding activity was similar in both resting and activated T cells. 1 Large large ADJ JJ Degree=Pos _ _ _ _ 2 amounts amount NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 significant significant ADJ JJ Degree=Pos _ _ _ _ 14 quantities quantity NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 AT AT PRON WDT PronType=Rel _ _ _ _ 19 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 SEA sea NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 + + SYM SYM _ _ _ _ _ 27 spleen spleen NUM CD NumType=Card _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 whereas whereas SCONJ IN _ _ _ _ _ 32 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 2 2 NUM CD NumType=Card _ _ _ _ 39 DNA dna NOUN NN Number=Sing _ _ _ _ 40 binding binding VERB VBG VerbForm=Ger _ _ _ _ 41 activity activity NOUN NN Number=Sing _ _ _ _ 42 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 43 similar similar ADJ JJ Degree=Pos _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 both both DET DT _ _ _ _ _ 46 resting resting NOUN NN Number=Sing _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 49 T t PROPN NNP Number=Sing _ _ _ _ 50 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 7569 # text = In contrast, anergic CD4+ 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 anergic anergic ADJ JJ Degree=Pos _ _ _ _ 5 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 + + SYM NFP _ _ _ _ _ # sent_id = 7570 # text = T cells contained severely reduced levels of AP-1 and Fos/Jun-containing NF-AT complexes but expressed significant amounts of NF-kappa B and Oct binding proteins after SEA stimulation. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 severely severely ADV RB _ _ _ _ _ 5 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 Fos Fos PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 13 / / PUNCT , _ _ _ _ SpaceAfter=No 14 Jun-containing Jun-contain PROPN NNP Number=Sing _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 AT AT PROPN NNP Number=Sing _ _ _ _ 18 complexes complex NOUN NNS Number=Plur _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 significant significant ADJ JJ Degree=Pos _ _ _ _ 22 amounts amount NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa PROPN NNP Number=Sing _ _ _ _ 27 B B PROPN NNP Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 Oct Oct PROPN NNP Number=Sing _ _ _ _ 30 binding bind VERB VBG VerbForm=Ger _ _ _ _ 31 proteins protein NOUN NNS Number=Plur _ _ _ _ 32 after after ADP IN _ _ _ _ _ 33 SEA Sea NOUN NN Number=Sing _ _ _ _ 34 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 7571 # text = Resolution of the NF-kappa B complex demonstrated predominant expression of p50-p65 heterodimers in activated CD4+ T cells, while anergic cells mainly expressed the transcriptionally inactive p50 homodimer. 1 Resolution resolution NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 complex complex SYM SYM _ _ _ _ _ 9 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 predominant predominant ADJ JJ Degree=Pos _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - SYM SYM _ _ _ _ SpaceAfter=No 15 p65 p65 NUM CD NumType=Card _ _ _ _ 16 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 + + SYM SYM _ _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 while while SCONJ IN _ _ _ _ _ 25 anergic anergic ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 mainly mainly ADV RB _ _ _ _ _ 28 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 transcriptionally transcriptionally ADV RB _ _ _ _ _ 31 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 32 p50 p50 NOUN NN Number=Sing _ _ _ _ 33 homodimer homodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 7572 # text = These alterations of transcription factors are likely to be responsible for repression of IL-2 in anergic T cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 alterations alteration NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 factors factor NOUN NNS Number=Plur _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 likely likely ADJ JJ Degree=Pos _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 repression repression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 anergic anergic ADJ JJ Degree=Pos _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7573 # text = Document 0030011132 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011132 0030011132 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7574 # text = A novel SP-1 site in the human interleukin-1 beta promoter confers preferential transcriptional activity in keratinocytes. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 novel novel NOUN NN Number=Sing _ _ _ _ 3 SP sp NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT : _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 site site NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 beta beta NOUN NN Number=Sing _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 confers confer NOUN NNS Number=Plur _ _ _ _ 16 preferential preferential ADJ JJ Degree=Pos _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 keratinocytes keratinocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7575 # text = To investigate the mechanisms of transcriptional activation of interleukin-1beta (IL-1beta) in non-monocytic cells, we constructed a series of reporter plasmids with the bacterial chloramphenicol acetyltransferase gene linked to various parts of the human IL-1beta promoter and performed transient transfection experiments. 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 beta beta NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 non-monocytic non-monocytic ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 24 constructed construct VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 series series NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 reporter reporter NOUN NN Number=Sing _ _ _ _ 29 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 33 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 34 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 35 gene gene NOUN NN Number=Sing _ _ _ _ 36 linked link VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 various various ADJ JJ Degree=Pos _ _ _ _ 39 parts part NOUN NNS Number=Plur _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 human human ADJ JJ Degree=Pos _ _ _ _ 43 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT , _ _ _ _ SpaceAfter=No 45 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 46 beta beta NOUN NN Number=Sing _ _ _ _ 47 promoter promoter NOUN NN Number=Sing _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 performed perform VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 50 transient transient ADJ JJ Degree=Pos _ _ _ _ 51 transfection transfection NOUN NN Number=Sing _ _ _ _ 52 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 7576 # text = We identified a promoter segment that activates transcription most efficiently in keratinocytes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 promoter promoter NOUN NN Number=Sing _ _ _ _ 5 segment segment NOUN NN Number=Sing _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 most most ADV RBS _ _ _ _ _ 10 efficiently efficiently ADV RB _ _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 keratinocytes keratinocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 7577 # text = Electrophoretic mobility shift assays (EMSA) with a 43-mer oligonucleotide derived from the functionally identified cis-acting element revealed specific complexes. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assays assay NOUN NNS Number=Plur _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 EMSA EMSA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 43 43 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 mer mer NOUN NN Number=Sing _ _ _ _ 13 oligonucleotide oligonucleotide NOUN NN Number=Sing _ _ _ _ 14 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 functionally functionally ADV RB _ _ _ _ _ 18 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 cis-acting cis-act ADJ JJ Degree=Pos _ _ _ _ 20 element element NOUN NN Number=Sing _ _ _ _ 21 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 specific specific ADJ JJ Degree=Pos _ _ _ _ 23 complexes complexe NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 7578 # text = By competition analysis with transcription factor consensus sequence oligonucleotides and by immunosupershift, transcription factor SP-1 or a closely related protein was shown to bind to this regulatory element. 1 By by ADP IN _ _ _ _ _ 2 competition competition NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 consensus consensus NOUN NN Number=Sing _ _ _ _ 8 sequence sequence NOUN NN Number=Sing _ _ _ _ 9 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 immunosupershift immunosupershift NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 SP sp NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 closely closely ADV RB _ _ _ _ _ 22 related related ADJ JJ Degree=Pos _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 bind bind VERB VB VerbForm=Inf _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 30 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 31 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 7579 # text = The closest match to the known SP-1 consensus sequence within the respective region is a TCCCCTCCCCT motif. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 closest closest ADJ JJS Degree=Sup _ _ _ _ 3 match match NOUN NN Number=Sing _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 SP sp NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 consensus consensus NOUN NN Number=Sing _ _ _ _ 11 sequence sequence NOUN NN Number=Sing _ _ _ _ 12 within within ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 respective respective ADJ JJ Degree=Pos _ _ _ _ 15 region region NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 TCCCCTCCCCT Tcccctcccct NOUN NN Number=Sing _ _ _ _ 19 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 7580 # text = Mutation of this motif almost completely, and specifically, abolished the binding of two low-mobility complexes and led to a 95% decrease of constitutive transcriptional activation of a reporter construct IL-1beta (-170/+108). 1 Mutation Mutation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 motif motif NOUN NN Number=Sing _ _ _ _ 5 almost almost ADV RB _ _ _ _ _ 6 completely completely ADV RB _ _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 specifically specifically ADV RB _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 abolished abolish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 binding binding NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 two two NUM CD NumType=Card _ _ _ _ 16 low low ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 mobility mobility NOUN NN Number=Sing _ _ _ _ 19 complexes complex NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 95 95 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 % % SYM NN Number=Sing _ _ _ _ 26 decrease decrease NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 29 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 reporter reporter NOUN NN Number=Sing _ _ _ _ 34 construct construct NOUN NN Number=Sing _ _ _ _ 35 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 beta beta NOUN NN Number=Sing _ _ _ _ 39 (- (- PUNCT . _ _ _ _ SpaceAfter=No 40 170 170 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 /+ /+ SYM SYM _ _ _ _ SpaceAfter=No 42 108 108 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 7581 # text = Likewise, activation of this reporter construct by tumor necrosis factor-alpha depended on the SP-1 site. 1 Likewise likewise ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 reporter reporter NOUN NN Number=Sing _ _ _ _ 7 construct construct NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 tumor tumor NOUN NN Number=Sing _ _ _ _ 10 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 11 factor-alpha factor-alpha NOUN NN Number=Sing _ _ _ _ 12 depended depend VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 SP sp NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 7582 # text = These observations suggest that a so-far-unrecognized SP-1 site in the human IL-1beta promoter may participate in the transcriptional regulation of this gene in keratinocytes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 so so ADV RB _ _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 far- far- SYM SYM _ _ _ _ SpaceAfter=No 9 unrecognized unrecognized ADJ JJ Degree=Pos _ _ _ _ 10 SP sp NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 site site NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 bet bet NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ _ 23 may may AUX MD VerbForm=Fin _ _ _ _ 24 participate participate VERB VB VerbForm=Inf _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 28 regulation regulation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 keratinocytes keratinocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7583 # text = Document 0030011133 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011133 0030011133 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7584 # text = Multifactor cis-dominant negative regulation of IL-2 gene expression in anergized T cells. 1 Multifactor Multifactor NOUN NN Number=Sing _ _ _ _ 2 cis cis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 3 -dominant -dominant ADJ JJ Degree=Pos _ _ _ _ 4 negative negative ADJ JJ Degree=Pos _ _ _ _ 5 regulation regulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 anergized anergized ADJ JJ Degree=Pos _ _ _ _ 14 T T PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7585 # text = The molecular mechanism underlying IL-2 transcriptional blockade in anergic T cell clones is not fully understood. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 3 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 4 underlying underly VERB VBG VerbForm=Ger _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 blockade blockade NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 anergic anergic ADJ JJ Degree=Pos _ _ _ _ 12 T T PROPN NNP Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 clones clone NOUN NNS Number=Plur _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 fully fully ADV RB _ _ _ _ _ 18 understood understand VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 7586 # text = To examine whether an active negative regulatory process occurs, we created a reporter construct containing as an enhancer four copies of the NF-AT site and one copy of the octamer site (4X NF-AT-Oct). 1 To to PART TO _ _ _ _ _ 2 examine examine VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 active active ADJ JJ Degree=Pos _ _ _ _ 6 negative negative ADJ JJ Degree=Pos _ _ _ _ 7 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 8 process process NOUN NN Number=Sing _ _ _ _ 9 occurs occur NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 12 created create VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 reporter reporter NOUN NN Number=Sing _ _ _ _ 15 construct construct NOUN NN Number=Sing _ _ _ _ 16 containing contain VERB VBG VerbForm=Ger _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 20 four four NUM CD NumType=Card _ _ _ _ 21 copies copy NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 AT AT PROPN NNP Number=Sing _ _ _ _ 27 site site NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 one one NUM CD NumType=Card _ _ _ _ 30 copy copy NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 octamer octamer ADJ JJR Degree=Cmp _ _ _ _ 34 site site NOUN NN Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 4X 4X PROPN NNP Number=Sing _ _ _ _ 37 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 7587 # text = This construct was only slightly reduced (1.3-fold) in its expression when stimulated under anergic conditions, while a whole mouse IL-2 enhancer construct showed a reduction of 4.3-fold. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 construct construct NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 only only ADV RB _ _ _ _ _ 5 slightly slightly ADV RB _ _ _ _ _ 6 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 1.3 1.3 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 when when ADV WRB PronType=Int _ _ _ _ 16 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 under under ADP IN _ _ _ _ _ 18 anergic anergic ADJ JJ Degree=Pos _ _ _ _ 19 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 while while SCONJ IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 whole whole ADJ JJ Degree=Pos _ _ _ _ 24 mouse mouse NOUN NN Number=Sing _ _ _ _ 25 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ _ 28 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 29 construct construct NOUN NN Number=Sing _ _ _ _ 30 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 reduction reduction NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 4.3 4.3 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 7588 # text = Addition of the -176 to -96 sequence to the 4X NF-AT-Oct construct did not impart the ability to be affected by anergy, but addition of the -236 to -96 sequence did, demonstrating that anergy is an active inhibitory process and that more than the presence of the -150 AP-1 binding site (-152 to -147) is required to mediate the effect. 1 Addition Addition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 - - SYM SYM _ _ _ _ SpaceAfter=No 5 176 176 NUM CD NumType=Card _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 96 96 NUM CD NumType=Card _ _ _ _ 9 sequence sequence NOUN NN Number=Sing _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 4X 4X PROPN NNP Number=Sing _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 Oct Oct PROPN NNP Number=Sing _ _ _ _ 18 construct construct NOUN NN Number=Sing _ _ _ _ 19 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 impart impart VERB VB VerbForm=Inf _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 ability ability NOUN NN Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 be be AUX VB VerbForm=Inf _ _ _ _ 26 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 anergy anergy NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 but but CCONJ CC _ _ _ _ _ 31 addition addition NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 - - SYM SYM _ _ _ _ SpaceAfter=No 35 236 236 NUM CD NumType=Card _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 - - SYM SYM _ _ _ _ SpaceAfter=No 38 96 96 NUM CD NumType=Card _ _ _ _ 39 sequence sequence NOUN NN Number=Sing _ _ _ _ 40 did do VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 demonstrating demonstrat VERB VBG VerbForm=Ger _ _ _ _ 43 that that SCONJ IN _ _ _ _ _ 44 anergy anergy NOUN NN Number=Sing _ _ _ _ 45 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 46 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 47 active active ADJ JJ Degree=Pos _ _ _ _ 48 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 49 process process NOUN NN Number=Sing _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 that that SCONJ IN _ _ _ _ _ 52 more more ADJ JJR Degree=Cmp _ _ _ _ 53 than than ADP IN _ _ _ _ _ 54 the the DET DT Definite=Def|PronType=Art _ _ _ _ 55 presence presence NOUN NN Number=Sing _ _ _ _ 56 of of ADP IN _ _ _ _ _ 57 the the DET DT Definite=Def|PronType=Art _ _ _ _ 58 - - SYM SYM _ _ _ _ SpaceAfter=No 59 150 150 NUM CD NumType=Card _ _ _ _ 60 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 61 - - SYM SYM _ _ _ _ SpaceAfter=No 62 1 1 NUM CD NumType=Card _ _ _ _ 63 binding binding VERB VBG VerbForm=Ger _ _ _ _ 64 site site NOUN NN Number=Sing _ _ _ _ 65 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 66 - - SYM SYM _ _ _ _ SpaceAfter=No 67 152 152 NUM CD NumType=Card _ _ _ _ 68 to to ADP IN _ _ _ _ _ 69 - - SYM SYM _ _ _ _ SpaceAfter=No 70 147 147 NUM CD NumType=Card _ _ _ SpaceAfter=No 71 ) ) PUNCT -RRB- _ _ _ _ _ 72 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 73 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 74 to to PART TO _ _ _ _ _ 75 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 76 the the DET DT Definite=Def|PronType=Art _ _ _ _ 77 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 78 . . PUNCT . _ _ _ _ _ # sent_id = 7589 # text = Mutational studies of the -236 to -96 sequence indicated that the presence of both the -130 AP-1-like site (-187 to -181) and the -150 proximal AP-1 site were necessary to observe anergy. 1 Mutational Mutational ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 236 236 NUM CD NumType=Card _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 - - SYM SYM _ _ _ _ SpaceAfter=No 9 96 96 NUM CD NumType=Card _ _ _ _ 10 sequence sequence NOUN NN Number=Sing _ _ _ _ 11 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 presence presence NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 both both CCONJ CC _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 130 130 NUM CD NumType=Card _ _ _ _ 20 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 like like ADJ JJ Degree=Pos _ _ _ _ 25 site site NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 187 187 NUM CD NumType=Card _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 - - SYM SYM _ _ _ _ SpaceAfter=No 31 181 181 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 - - SYM SYM _ _ _ _ SpaceAfter=No 36 150 150 NUM CD NumType=Card _ _ _ _ 37 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 38 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 1 1 NUM CD NumType=Card _ _ _ _ 41 site site NOUN NN Number=Sing _ _ _ _ 42 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 43 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 44 to to PART TO _ _ _ _ _ 45 observe observe VERB VB VerbForm=Inf _ _ _ _ 46 anergy anergy NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 7590 # text = Because the -180 site is not required for trans-activation, it was possible to confirm by mutation in the normal mouse IL-2 enhancer that this site is absolutely essential for anergy induction. 1 Because because SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 - - SYM SYM _ _ _ _ SpaceAfter=No 4 180 180 NUM CD NumType=Card _ _ _ _ 5 site site NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 trans- trans- SYM NFP _ _ _ _ SpaceAfter=No 11 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 possible possible ADJ JJ Degree=Pos _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 confirm confirm VERB VB VerbForm=Inf _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 mutation mutation NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 normal normal ADJ JJ Degree=Pos _ _ _ _ 23 mouse mouse NOUN NN Number=Sing _ _ _ _ 24 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ _ 27 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 28 that that SCONJ IN _ _ _ _ _ 29 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 30 site site NOUN NN Number=Sing _ _ _ _ 31 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 absolutely absolutely ADV RB _ _ _ _ _ 33 essential essential ADJ JJ Degree=Pos _ _ _ _ 34 for for ADP IN _ _ _ _ _ 35 anergy anergy NOUN NN Number=Sing _ _ _ _ 36 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 7591 # text = The simplest model to explain these results is that anergy is mediated by a complex of multiple transcription factors that exert a cis-acting dominant negative regulatory effect on the trans-activation of the IL-2 gene. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 simplest simplest ADJ JJS Degree=Sup _ _ _ _ 3 model model NOUN NN Number=Sing _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 explain explain VERB VB VerbForm=Inf _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 results result NOUN NNS Number=Plur _ _ _ _ 8 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 anergy anergy NOUN NNS Number=Plur _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 complex complex NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factors factor NOUN NNS Number=Plur _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 exert exert VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 acting act VERB VBG VerbForm=Ger _ _ _ _ 26 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 27 negative negative ADJ JJ Degree=Pos _ _ _ _ 28 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 29 effect effect NOUN NN Number=Sing _ _ _ _ 30 on on ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 trans- trans- SYM NFP _ _ _ _ SpaceAfter=No 33 activation activation NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 2 2 NUM CD NumType=Card _ _ _ _ 39 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7592 # text = Document 0030011135 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011135 0030011135 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7593 # text = Cytokine modulation of HIV expression. 1 Cytokine Cytokine NOUN NN Number=Sing _ _ _ _ 2 modulation modulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 HIV HIV NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7594 # text = Cytokines, the peptide hormones which control the homeostasis of the immune system and also play a fundamental role in inflammatory and immune mediated reactions, have been involved at multiple levels in the pathogenesis of the acquired immune deficiency syndrome (AIDS). 1 Cytokines Cytokine INTJ UH _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 peptide peptide ADJ JJ Degree=Pos _ _ _ _ 5 hormones hormone NOUN NNS Number=Plur _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 control control VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 homeostasis homeostasis NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 immune immune ADJ JJ Degree=Pos _ _ _ _ 13 system system NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 also also ADV RB _ _ _ _ _ 16 play play VERB VB VerbForm=Inf _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 fundamental fundamental ADJ JJ Degree=Pos _ _ _ _ 19 role role NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 immune immune ADJ JJ Degree=Pos _ _ _ _ 24 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 reactions reaction NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 29 involved involve ADJ JJ Degree=Pos _ _ _ _ 30 at at ADP IN _ _ _ _ _ 31 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 32 levels level NOUN NNS Number=Plur _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 acquired acquire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 immune immune ADJ JJ Degree=Pos _ _ _ _ 40 deficiency deficiency NOUN NN Number=Sing _ _ _ _ 41 syndrome syndrome NOUN NN Number=Sing _ _ _ _ 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 AIDS aids NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 7595 # text = Infection with the human immunodeficiency virus (HIV) has been shown to induce production of several cytokines both in vitro and in vivo. 1 Infection Infection NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 12 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 induce induce VERB VB VerbForm=Inf _ _ _ _ 15 production production NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 several several ADJ JJ Degree=Pos _ _ _ _ 18 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 19 both both CCONJ CC _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 vitro vitro NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 7596 # text = Conversely, several cytokines modulate the levels of HIV expression in infected cells of both T lymphocytic and mononuclear phagocytic lineage. 1 Conversely Conversely ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 several several ADJ JJ Degree=Pos _ _ _ _ 4 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 5 modulate modulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 levels level NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 HIV Hiv NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 infected infect ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 both both DET DT _ _ _ _ _ 16 T T NOUN NN Number=Sing _ _ _ _ 17 lymphocytic lymphocytic ADJ JJ Degree=Pos _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 20 phagocytic phagocytic ADJ JJ Degree=Pos _ _ _ _ 21 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 7597 # text = Activated mononuclear cells, particularly B cells which are in a state of chronic activation in HIV infected individuals, release HIV-inductive cytokines and thus play a potentially important role in the pathogenesis of HIV infection. 1 Activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 particularly particularly ADV RB _ _ _ _ _ 6 B b ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 state state NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 HIV HIV PROPN NNP Number=Sing _ _ _ _ 18 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 release release INTJ UH _ _ _ _ _ 22 HIV- HIV- SYM NFP _ _ _ _ SpaceAfter=No 23 inductive inductive ADJ JJ Degree=Pos _ _ _ _ 24 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 thus thus ADV RB _ _ _ _ _ 27 play play VERB VB VerbForm=Inf _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 potentially potentially ADV RB _ _ _ _ _ 30 important important ADJ JJ Degree=Pos _ _ _ _ 31 role role NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 HIV HIV PROPN NNP Number=Sing _ _ _ _ 37 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7598 # text = Document 0030011140 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011140 0030011140 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7599 # text = An erythroid specific enhancer upstream to the gene encoding the cell-type specific transcription factor GATA-1. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 3 specific specific ADJ JJ Degree=Pos _ _ _ _ 4 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 5 upstream upstream NOUN NN Number=Sing _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 type type NOUN NN Number=Sing _ _ _ _ 14 specific specific ADJ JJ Degree=Pos _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7600 # text = The transcription factor GATA-1 is expressed in a subset of hemopoietic cells, where it mediates the cell-type specific expression of several genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 GATA GATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 subset subset NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 hemopoietic hemopoietic ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 where where ADV WRB PronType=Rel _ _ _ _ 17 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 18 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 type type NOUN NN Number=Sing _ _ _ _ 23 specific specific ADJ JJ Degree=Pos _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 several several ADJ JJ Degree=Pos _ _ _ _ 27 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 7601 # text = We have cloned the mouse and human GATA-1 genes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 mouse mouse NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 GATA GATA NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 7602 # text = A region upstream to the first exon, and highly conserved between mouse and man, acts as an erythroid specific enhancer in transient assays, if linked to the GATA-1 or to the SV40 promoter. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 region region NOUN NN Number=Sing _ _ _ _ 3 upstream upstream NOUN NN Number=Sing _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 7 exon exon NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 highly highly ADV RB _ _ _ _ _ 11 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 between between ADP IN _ _ _ _ _ 13 mouse mouse NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 man man NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 21 specific specific ADJ JJ Degree=Pos _ _ _ _ 22 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 transient transient ADJ JJ Degree=Pos _ _ _ _ 25 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 if if SCONJ IN _ _ _ _ _ 28 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 or or CCONJ CC _ _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 SV40 SV40 PROPN NNP Number=Sing _ _ _ _ 38 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 7603 # text = The activity of the enhancer is almost completely dependent on the integrity of a dimeric GATA-1 binding site. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activity activity NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 almost almost ADV RB _ _ _ _ _ 8 completely completely ADV RB _ _ _ _ _ 9 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 integrity integrity NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 dimeric dimeric ADJ JJ Degree=Pos _ _ _ _ 16 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 binding binding VERB VBG VerbForm=Ger _ _ _ _ 20 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7604 # text = Document 0030011145 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011145 0030011145 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7605 # text = Constitutive expression of specific interferon isotypes in peripheral blood leukocytes from normal individuals and in promonocytic U937 cells. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 interferon interferon NOUN NN Number=Sing _ _ _ _ 6 isotypes isotype NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 9 blood blood NOUN NN Number=Sing _ _ _ _ 10 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 normal normal ADJ JJ Degree=Pos _ _ _ _ 13 individuals individual NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 17 U937 U937 NUM CD NumType=Card _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7606 # text = Constitutive expression of IFN-alpha5 and IFN-beta was detected in different lymphoid cells including peripheral blood mononuclear cells from normal individuals following amplification of IFN mRNA by reverse transcriptase-polymerase chain reaction and direct sequencing of the amplified product. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 alpha5 alpha5 NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 beta beta NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 different different ADJ JJ Degree=Pos _ _ _ _ 15 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 including include VERB VBG VerbForm=Ger _ _ _ _ 18 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 19 blood blood NOUN NN Number=Sing _ _ _ _ 20 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 normal normal ADJ JJ Degree=Pos _ _ _ _ 24 individuals individual NOUN NNS Number=Plur _ _ _ _ 25 following follow VERB VBG VerbForm=Ger _ _ _ _ 26 amplification amplification NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 IFN IFN PROPN NNP Number=Sing _ _ _ _ 29 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 reverse reverse NOUN NN Number=Sing _ _ _ _ 32 transcriptase transcriptase NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 35 chain chain NOUN NN Number=Sing _ _ _ _ 36 reaction reaction NOUN NN Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 direct direct ADJ JJ Degree=Pos _ _ _ _ 39 sequencing sequencing NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 amplified amplify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 product product NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 7607 # text = The activated form of the interferon-induced transcription factor complex ISGF3 was also detected in nuclear extracts from uninduced cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 form form NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 complex complex NOUN NN Number=Sing _ _ _ _ 12 ISGF3 ISGF3 NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 extracts extract NOUN NNS Number=Plur _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 uninduced uninduced ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 7608 # text = Culture supernatants from uninduced U937 cells were also found to activate an ISRE cloned upstream of the luciferase reporter gene, indicating the presence of endogenous IFN activity equivalent to approximately 0.3 to 0.5 IU/mL. 1 Culture culture ADJ JJ Degree=Pos _ _ _ _ 2 supernatants supernatant NOUN NNS Number=Plur _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 uninduced uninduced ADJ JJ Degree=Pos _ _ _ _ 5 U937 U937 NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 also also ADV RB _ _ _ _ _ 9 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 activate activate VERB VB VerbForm=Inf _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 ISRE Isre ADJ JJ Degree=Pos _ _ _ _ 14 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 upstream upstream NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 luciferase luciferase ADJ JJ Degree=Pos _ _ _ _ 19 reporter reporter NOUN NN Number=Sing _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 presence presence NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 27 IFN IFN PROPN NNP Number=Sing _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ _ 29 equivalent equivalent ADJ JJ Degree=Pos _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 approximately approximately ADV RB _ _ _ _ _ 32 0.3 0.3 NUM CD NumType=Card _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 0.5 0.5 NUM CD NumType=Card _ _ _ _ 35 IU IU PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 / / PUNCT , _ _ _ _ SpaceAfter=No 37 mL mL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 7609 # text = This endogenous IFN was also shown to play a role in maintaining the basal level of expression of the major histocompatibility class I genes in lymphoid cells. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 3 IFN Ifn NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 play play VERB VB VerbForm=Inf _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 role role NOUN NN Number=Sing _ _ _ _ 11 in in SCONJ IN _ _ _ _ _ 12 maintaining maintain VERB VBG VerbForm=Ger _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 basal basal ADJ JJ Degree=Pos _ _ _ _ 15 level level NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 major major ADJ JJ Degree=Pos _ _ _ _ 21 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 22 class class NOUN NN Number=Sing _ _ _ _ 23 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 24 genes gene NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 7610 # text = These results suggest that IFN-alpha5 and IFN-beta are produced at low levels in normal tissues and play an important role in the regulation of cell function and in the maintenance of homeostasis. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 alpha5 alpha5 NUM CD NumType=Card _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 beta beta NOUN NN Number=Sing _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 produced produce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 at at ADP IN _ _ _ _ _ 15 low low ADJ JJ Degree=Pos _ _ _ _ 16 levels level NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 normal normal ADJ JJ Degree=Pos _ _ _ _ 19 tissues tissue NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 play play VERB VB VerbForm=Inf _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 important important ADJ JJ Degree=Pos _ _ _ _ 24 role role NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 regulation regulation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 function function NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 maintenance maintenance NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 homeostasis homeostasis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7611 # text = Document 0030011149 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011149 0030011149 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7612 # text = Constitutive activation of NF-kB in human thymocytes. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kB kb PROPN NNP Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7613 # text = NF-kB is a eukaryotic transcription regulatory factor. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 kB kb PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 eukaryotic eukaryotic ADJ JJ Degree=Pos _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 7614 # text = In T cells and T cell lines, NF-kB is bound to a cytoplasmic proteic inhibitor, the IkB. 1 In in ADP IN _ _ _ _ _ 2 T t PROPN NNP Number=Sing _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 T t NUM CD NumType=Card _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kB kb PROPN NNP Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 bound bound ADJ JJ Degree=Pos _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 17 proteic proteic ADJ JJ Degree=Pos _ _ _ _ 18 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 IkB Ikb NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 7615 # text = Treatment of T cells with mitogens (phorbol esters) or cytokines (TNF alpha) induces NF-kB nuclear translocation and the subsequent expression of NF-kB dependent T cell genes. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 mitogens mitogen NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 9 esters ester NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 TNF Tnf NOUN NN Number=Sing _ _ _ _ 15 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kB kb PROPN NNP Number=Sing _ _ _ _ 21 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 22 translocation translocation NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kB kb PROPN NNP Number=Sing _ _ _ _ 31 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 32 T t NUM CD NumType=Card _ _ _ _ 33 cell cell NOUN NN Number=Sing _ _ _ _ 34 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 7616 # text = Here we examined the activation of NF-kB in human T cell thymic progenitors. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kB kb PROPN NNP Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cell cell VERB VB VerbForm=Inf _ _ _ _ 14 thymic thymic ADJ JJ Degree=Pos _ _ _ _ 15 progenitors progenitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 7617 # text = We report differences in (Ca2+)i requirement for NF-kB activation in thymocytes as compared to mature T cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 differences difference NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 + + SYM SYM _ _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 i i PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 requirement requirement VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kB kb PROPN NNP Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 mature mature ADJ JJ Degree=Pos _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 7618 # text = Furthermore, our results indicated that thymocytes have a constitutively active form of NF-kB, suggesting that they are activated in vivo. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 thymocytes thymocytes NOUN NNS Number=Plur _ _ _ _ 8 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 constitutively constitutively ADV RB _ _ _ _ _ 11 active active ADJ JJ Degree=Pos _ _ _ _ 12 form form NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kB kb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 vivo. vivo. NOUN NN Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7619 # text = Document 0030011151 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011151 0030011151 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7620 # text = Requirements for induction of vitamin D-mediated gene regulation in normal human B lymphocytes. 1 Requirements requirement NOUN NNS Number=Plur _ _ _ _ 2 for for ADP IN _ _ _ _ _ 3 induction induction NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 vitamin vitamin NOUN NNS Number=Plur _ _ _ _ 6 D- D- PUNCT : _ _ _ _ SpaceAfter=No 7 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 regulation regulation NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 normal normal ADJ JJ Degree=Pos _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7621 # text = Mature human lymphocytes are unique targets of 1 alpha,25-dihydroxyvitamin D3 (1 alpha,25(OH)2D3) in that vitamin D receptors (VDR) are not constitutively expressed, and specific cellular activation signals are required for both the up-regulation of VDR and establishment of reactivity to the lipophilic ligand. 1 Mature Mature ADJ JJ Degree=Pos _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 unique unique ADJ JJ Degree=Pos _ _ _ _ 6 targets target NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 1 1 NUM CD NumType=Card _ _ _ _ 9 alpha,25 alpha,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 -dihydroxyvitamin -dihydroxyvitamin NOUN NN Number=Sing _ _ _ _ 11 D3 D3 NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 alpha,25 alpha,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 OH Oh INTJ UH _ _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 2D3 2D3 X LS _ _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 22 vitamin vitamin ADJ JJ Degree=Pos _ _ _ _ 23 D d NOUN NN Number=Sing _ _ _ _ 24 receptors receptor NOUN NNS Number=Plur _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 VDR VDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 not not PART RB _ _ _ _ _ 30 constitutively constitutively ADV RB _ _ _ _ _ 31 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 specific specific ADJ JJ Degree=Pos _ _ _ _ 35 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 36 activation activation NOUN NN Number=Sing _ _ _ _ 37 signals signal NOUN NNS Number=Plur _ _ _ _ 38 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 39 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 40 for for ADP IN _ _ _ _ _ 41 both both CCONJ CC _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 regulation regulation NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 VDR Vdr NOUN NN Number=Sing _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 establishment establishment NOUN NN Number=Sing _ _ _ _ 50 of of ADP IN _ _ _ _ _ 51 reactivity reactivity NOUN NN Number=Sing _ _ _ _ 52 to to ADP IN _ _ _ _ _ 53 the the DET DT Definite=Def|PronType=Art _ _ _ _ 54 lipophilic lipophilic ADJ JJ Degree=Pos _ _ _ _ 55 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 7622 # text = Treatment of B lymphocytes with the cytokine IL-4 (IL-4), in the absence of prior activation, induces a weak up-regulation of VDR expression but fails to generate vitamin D-responsive element (VDRE)-reactive nuclear protein complexes or to initiate the genomic transcription of 25-hydroxyvitamin D3 24-hydroxylase. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 B b ADJ JJ Degree=Pos _ _ _ _ 4 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 8 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT : _ _ _ _ SpaceAfter=No 10 4 4 NUM CD NumType=Card _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 absence absence NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 prior prior ADJ JJ Degree=Pos _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 weak weak ADJ JJ Degree=Pos _ _ _ _ 27 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 regulation regulation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 VDR Vdr ADJ JJ Degree=Pos _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ _ 33 but but CCONJ CC _ _ _ _ _ 34 fails fail NOUN NNS Number=Plur _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 generate generate VERB VB VerbForm=Inf _ _ _ _ 37 vitamin vitamin NOUN NNS Number=Plur _ _ _ _ 38 D- D- PUNCT : _ _ _ _ SpaceAfter=No 39 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 40 element element NOUN NN Number=Sing _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 VDRE VDRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 44 - - PUNCT : _ _ _ _ SpaceAfter=No 45 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 46 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 47 protein protein NOUN NN Number=Sing _ _ _ _ 48 complexes complex NOUN NNS Number=Plur _ _ _ _ 49 or or CCONJ CC _ _ _ _ _ 50 to to PART TO _ _ _ _ _ 51 initiate initiate VERB VB VerbForm=Inf _ _ _ _ 52 the the DET DT Definite=Def|PronType=Art _ _ _ _ 53 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 54 transcription transcription NOUN NN Number=Sing _ _ _ _ 55 of of ADP IN _ _ _ _ _ 56 25 25 NUM CD NumType=Card _ _ _ SpaceAfter=No 57 - - PUNCT : _ _ _ _ SpaceAfter=No 58 hydroxyvitamin hydroxyvitamin NOUN NN Number=Sing _ _ _ _ 59 D3 D3 NUM CD NumType=Card _ _ _ _ 60 24 24 NUM CD NumType=Card _ _ _ SpaceAfter=No 61 -hydroxylase -hydroxylase NOUN NN Number=Sing _ _ _ SpaceAfter=No 62 . . PUNCT . _ _ _ _ _ # sent_id = 7623 # text = Stimulation of B lymphocytes by either ligation of CD40 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 B b ADJ JJ Degree=Pos _ _ _ _ 4 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 either either DET DT _ _ _ _ _ 7 ligation ligation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ # sent_id = 7624 # text = Ag or cross-linking the Ig receptor is also insufficient to render B lymphocytes responsive to 1 alpha,25(OH)2D3. 1 Ag ag VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 or or CCONJ CC _ _ _ _ _ 3 cross cross VERB VB Mood=Imp|VerbForm=Fin _ _ _ SpaceAfter=No 4 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 Ig ig PROPN NNP Number=Sing _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 also also ADV RB _ _ _ _ _ 10 insufficient insufficient ADJ JJ Degree=Pos _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 render render VERB VB VerbForm=Inf _ _ _ _ 13 B b ADJ JJ Degree=Pos _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 15 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 1 1 NUM CD NumType=Card _ _ _ _ 18 alpha,25 alpha,25 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 OH oh INTJ UH _ _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 2D3 2D3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 7625 # text = However, this apparent lack of response to the secosterol can be overcome by stimulation of B lymphocytes with a combination of these cellular activation signals, which are sufficient to lead to G1 cell cycle progression. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 apparent apparent ADJ JJ Degree=Pos _ _ _ _ 5 lack lack NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 response response NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 secosterol secosterol NOUN NN Number=Sing _ _ _ _ 11 can can AUX MD VerbForm=Fin _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 overcome overcome VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 B b ADJ JJ Degree=Pos _ _ _ _ 18 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 combination combination NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 24 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 which which PRON WDT PronType=Rel _ _ _ _ 29 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 lead lead VERB VB VerbForm=Inf _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 G1 G1 NUM CD NumType=Card _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ _ 36 cycle cycle NOUN NN Number=Sing _ _ _ _ 37 progression progression NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 7626 # text = In the presence of 1 alpha,25(OH)2D3, cellular activation associated with stimulation of such a progression appears to be sufficient for the up-regulation of VDR message and protein and necessary for the establishment of VDRE binding complexes and the induction of 24-hydroxylase message. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 presence presence NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 1 1 NUM CD NumType=Card _ _ _ _ 6 alpha,25 alpha,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 2D3 2D3 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 cellular celular ADJ JJ Degree=Pos _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 such such DET PDT _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 progression progression NOUN NN Number=Sing _ _ _ _ 21 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 be be AUX VB VerbForm=Inf _ _ _ _ 24 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 regulation regulation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 VDR Vdr ADJ JJ Degree=Pos _ _ _ _ 32 message message NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 protein protein NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 establishment establishment NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 VDRE Vdre PROPN NNP Number=Sing _ _ _ _ 42 binding binding VERB VBG VerbForm=Ger _ _ _ _ 43 complexes complex NOUN NNS Number=Plur _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 induction induction NOUN NN Number=Sing _ _ _ _ 47 of of ADP IN _ _ _ _ _ 48 24 24 NUM CD NumType=Card _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 hydroxylase hydroxylase NOUN NN Number=Sing _ _ _ _ 51 message message NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 7627 # text = Furthermore, biologic functions are modulated, in that the hormone inhibits proliferation in a subset of the activated B cells. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 biologic biologic ADJ JJ Degree=Pos _ _ _ _ 4 functions function NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 modulated modulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 hormone hormone NOUN NN Number=Sing _ _ _ _ 12 inhibits inhibits NOUN NNS Number=Plur _ _ _ _ 13 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 subset subset NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 7628 # text = These observations suggest that reactivity to 1 alpha,25(OH)2D3 is tightly regulated in B lymphocytes, requiring specific signals for its initiation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 reactivity reactivity NOUN NN Number=Sing _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 1 1 NUM CD NumType=Card _ _ _ _ 8 alpha,25 alpha,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 OH Oh INTJ UH _ _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 2D3 2D3 NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 tightly tightly ADV RB _ _ _ _ _ 15 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 B b ADJ JJ Degree=Pos _ _ _ _ 18 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 requiring require VERB VBG VerbForm=Ger _ _ _ _ 21 specific specific ADJ JJ Degree=Pos _ _ _ _ 22 signals signal NOUN NNS Number=Plur _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 25 initiation initiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7629 # text = Document 0030011153 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011153 0030011153 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7630 # text = Functional analysis of cis-linked regulatory sequences in the HLA DRA promoter by transcription in vitro. 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 cis cis DET DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 5 -linked -link ADJ JJ Degree=Pos _ _ _ _ 6 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 7 sequences sequence NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 HLA HLA PROPN NNP Number=Sing _ _ _ _ 11 DRA DRA PROPN NNP Number=Sing _ _ _ _ 12 promoter promoter VERB VB VerbForm=Inf _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7631 # text = Two consensus sequences, called X and Y boxes, capable of binding nuclear proteins and regulating expression in B cells have been defined within the immediate upstream region of major histocompatibility complex (MHC) class II promoters. 1 Two two NUM CD NumType=Card _ _ _ _ 2 consensus consensus NOUN NN Number=Sing _ _ _ _ 3 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 X x PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 Y y ADJ JJ Degree=Pos _ _ _ _ 9 boxes box NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 capable capable ADJ JJ Degree=Pos _ _ _ _ 12 of of SCONJ IN _ _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 proteins protein NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 B b ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 24 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 within within ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 28 upstream upstream NOUN NN Number=Sing _ _ _ _ 29 region region NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 major major ADJ JJ Degree=Pos _ _ _ _ 32 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 33 complex complex NOUN NN Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 MHC MHC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 class class NOUN NN Number=Sing _ _ _ _ 38 II ii NUM CD NumType=Card _ _ _ _ 39 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 7632 # text = Unlike other class II promoters, the HLA-DR alpha (DRA) promoter also contains one element identical to the "octamer" motif of immunoglobulin variable region promoters that is responsible for B cell-specific transcription. 1 Unlike unlike ADP IN _ _ _ _ _ 2 other other ADJ JJ Degree=Pos _ _ _ _ 3 class class NOUN NN Number=Sing _ _ _ _ 4 II ii NUM CD NumType=Card _ _ _ _ 5 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 DR dr PROPN NNP Number=Sing _ _ _ _ 11 alpha alpha PROPN NNP Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 DRA DRA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 also also ADV RB _ _ _ _ _ 17 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 one one NUM CD NumType=Card _ _ _ _ 19 element element NOUN NN Number=Sing _ _ _ _ 20 identical identical ADJ JJ Degree=Pos _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 " " PUNCT `` _ _ _ _ SpaceAfter=No 24 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 " " PUNCT '' _ _ _ _ _ 26 motif motif NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 29 variable variable ADJ JJ Degree=Pos _ _ _ _ 30 region region NOUN NN Number=Sing _ _ _ _ 31 promoters promoter NOUN NNS Number=Plur _ _ _ _ 32 that that PRON WDT PronType=Rel _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 B b ADJ JJ Degree=Pos _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 specific specific ADJ JJ Degree=Pos _ _ _ _ 40 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 7633 # text = This "octamer" in the context of DRA appears capable of binding both the ubiquitous (OTF-1) and lymphoid-specific (OTF-2) "octamer" binding proteins, but at least one other distinct "octamer" complex was found. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 " " PUNCT `` _ _ _ _ SpaceAfter=No 3 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 " " PUNCT '' _ _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 context context NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 DRA DRA PROPN NNP Number=Sing _ _ _ _ 10 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 capable capable ADJ JJ Degree=Pos _ _ _ _ 12 of of SCONJ IN _ _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 both both CCONJ CC _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 OTF OTF ADP IN _ _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 X LS _ _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 lymphoid lymphoid VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 24 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 OTF Otf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 " " PUNCT `` _ _ _ _ SpaceAfter=No 31 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 " " PUNCT '' _ _ _ _ _ 33 binding binde VERB VBG VerbForm=Ger _ _ _ _ 34 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 but but CCONJ CC _ _ _ _ _ 37 at at ADV RB _ _ _ _ _ 38 least least ADV RBS Degree=Sup _ _ _ _ 39 one one NUM CD NumType=Card _ _ _ _ 40 other other ADJ JJ Degree=Pos _ _ _ _ 41 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 42 " " PUNCT `` _ _ _ _ SpaceAfter=No 43 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 " " PUNCT '' _ _ _ _ _ 45 complex complex NOUN NN Number=Sing _ _ _ _ 46 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 47 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 7634 # text = In order to characterize the function of cis-acting elements, we have developed an in vitro system in which a DRA promoter construct is transcribed more efficiently in extracts from B cells than in extracts from class II-negative HeLa cells. 1 In in ADP IN _ _ _ _ _ 2 order order NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 characterize characterize VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 function function NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 cis-acting cis-act ADJ JJ Degree=Pos _ _ _ _ 9 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 12 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 developed develop VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 17 system system NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 DRA DRA PROPN NNP Number=Sing _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ _ 23 construct construct NOUN NN Number=Sing _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 more more ADV RBR _ _ _ _ _ 27 efficiently efficiently ADV RB _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 extracts extract NOUN NNS Number=Plur _ _ _ _ 30 from from ADP IN _ _ _ _ _ 31 B b ADJ JJ Degree=Pos _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 than than ADP IN _ _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 extracts extract NOUN NNS Number=Plur _ _ _ _ 36 from from ADP IN _ _ _ _ _ 37 class class NOUN NN Number=Sing _ _ _ _ 38 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 39 - - PUNCT , _ _ _ _ SpaceAfter=No 40 negative negative ADJ JJ Degree=Pos _ _ _ _ 41 HeLa Hela PROPN NNP Number=Sing _ _ _ _ 42 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 7635 # text = 5' deletion constructs which lacked the Y box, but retained the "octamer" motif and TATA box were completely inactive, and internal deletion of the Y box reduced transcription by 95%. 1 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 ' ' PUNCT `` _ _ _ _ _ 3 deletion deletion NOUN NN Number=Sing _ _ _ _ 4 constructs construct NOUN NNS Number=Plur _ _ _ _ 5 which which PRON WDT PronType=Rel _ _ _ _ 6 lacked lack VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 Y y NOUN NN Number=Sing _ _ _ _ 9 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 retained retain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 " " PUNCT `` _ _ _ _ SpaceAfter=No 15 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 " " PUNCT '' _ _ _ _ _ 17 motif motif NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 TATA TATa NOUN NN Number=Sing _ _ _ _ 20 box box NOUN NN Number=Sing _ _ _ _ 21 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 completely completely ADV RB _ _ _ _ _ 23 inactive inactive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 internal internal ADJ JJ Degree=Pos _ _ _ _ 27 deletion deletion NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 Y y PROPN NNP Number=Sing _ _ _ _ 31 box box NOUN NN Number=Sing _ _ _ _ 32 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 95 95 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 7636 # text = Using supercoiled, but not linear templates, we observed differences in transcription efficiencies from templates lacking or disrupting the X consensus element that reflect effects of random replacement of X box sequences in transient expression assays. 1 Using use AUX VBG VerbForm=Ger _ _ _ _ 2 supercoiled supercoiled VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 but but CCONJ CC _ _ _ _ _ 5 not not ADV RB _ _ _ _ _ 6 linear linear ADJ JJ Degree=Pos _ _ _ _ 7 templates template NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 10 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 differences difference NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 efficiencies efficiency NOUN NNS Number=Plur _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 templates template NOUN NNS Number=Plur _ _ _ _ 17 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 disrupting disrupt VERB VBG VerbForm=Ger _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 X x PROPN NNP Number=Sing _ _ _ _ 22 consensus consensus NOUN NN Number=Sing _ _ _ _ 23 element element NOUN NN Number=Sing _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 reflect reflect VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 effects effect NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 random random NOUN NN Number=Sing _ _ _ _ 29 replacement replacement NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 X x NOUN NN Number=Sing _ _ _ _ 32 box box NOUN NN Number=Sing _ _ _ _ 33 sequences sequence NOUN NNS Number=Plur _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 transient transient ADJ JJ Degree=Pos _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ _ 37 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 7637 # text = Demonstration of the complete dependence on the Y box in this system suggests that, despite its demonstrated importance in the DRA promoter, the DRA "octamer" does not utilize OTF-2 in a manner analogous to immunoglobulin promoters in B cells. 1 Demonstration demonstration NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 complete complete ADJ JJ Degree=Pos _ _ _ _ 5 dependence dependence NOUN NN Number=Sing _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 Y y NOUN NN Number=Sing _ _ _ _ 9 box box NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 12 system system NOUN NN Number=Sing _ _ _ _ 13 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 despite despite ADP IN _ _ _ _ _ 17 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 importance importance NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 DRA DRA PROPN NNP Number=Sing _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 DRA DRa NOUN NN Number=Sing _ _ _ _ 27 " " PUNCT `` _ _ _ _ SpaceAfter=No 28 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 " " PUNCT '' _ _ _ _ _ 30 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 not not PART RB _ _ _ _ _ 32 utilize utilize VERB VB VerbForm=Inf _ _ _ _ 33 OTF Otf NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 2 2 NUM CD NumType=Card _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 manner manner NOUN NN Number=Sing _ _ _ _ 39 analogous analogous ADJ JJ Degree=Pos _ _ _ _ 40 to to PART TO _ _ _ _ _ 41 immunoglobulin immunoglobulin VERB VB VerbForm=Inf _ _ _ _ 42 promoters promoter NOUN NNS Number=Plur _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 B b ADJ JJ Degree=Pos _ _ _ _ 45 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7638 # text = Document 0030011155 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011155 0030011155 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7639 # text = Disruption of alpha beta but not of gamma delta T cell development by overexpression of the helix-loop-helix protein 1 Disruption disruption NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 alpha alpha NOUN NN Number=Sing _ _ _ _ 4 beta beta NOUN NN Number=Sing _ _ _ _ 5 but but CCONJ CC _ _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 gamma gamma PROPN NNP Number=Sing _ _ _ _ 9 delta delta PROPN NNP Number=Sing _ _ _ _ 10 T T PROPN NNP Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 development development NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 helix helix NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 -loop -loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 -helix -helix NUM CD NumType=Card _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ # sent_id = 7640 # text = Id3 in committed T cell progenitors. 1 Id3 Id3 NOUN NN Number=Sing _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 committed committed ADJ JJ Degree=Pos _ _ _ _ 4 T T PROPN NNP Number=Sing _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 progenitors progenitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7641 # text = Enforced expression of Id3, which has the capacity to inhibit many basic helix-loop-helix (bHLH) transcription factors, in human CD34(+) hematopoietic progenitor cells that have not undergone T cell receptor (TCR) gene rearrangements inhibits development of the transduced cells into TCRalpha beta and gamma delta cells in a fetal thymic organ culture (FTOC). 1 Enforced Enforced ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Id3 Id3 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 capacity capacity NOUN NN Number=Sing _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 12 many many ADJ JJ Degree=Pos _ _ _ _ 13 basic basic ADJ JJ Degree=Pos _ _ _ _ 14 helix-loop helix-loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 -helix -helix NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 bHLH bHLH NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 CD34 CD34 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 +) +) SYM NFP _ _ _ _ _ 27 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 28 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 that that PRON WDT PronType=Rel _ _ _ _ 31 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 32 not not PART RB _ _ _ _ _ 33 undergone undergone ADJ JJ Degree=Pos _ _ _ _ 34 T t PROPN NNP Number=Sing _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ _ 36 receptor receptor NOUN NN Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 TCR TCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 gene gene NOUN NN Number=Sing _ _ _ _ 41 rearrangements rearrangement NOUN NNS Number=Plur _ _ _ _ 42 inhibits inhibits NOUN NNS Number=Plur _ _ _ _ 43 development development NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 transduced transduced ADJ JJ Degree=Pos _ _ _ _ 47 cells cell NOUN NNS Number=Plur _ _ _ _ 48 into into ADP IN _ _ _ _ _ 49 TCRalpha TCRalpha PROPN NNP Number=Sing _ _ _ _ 50 beta beta NOUN NN Number=Sing _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 gamma gamma NOUN NN Number=Sing _ _ _ _ 53 delta delta NOUN NN Number=Sing _ _ _ _ 54 cells cell NOUN NNS Number=Plur _ _ _ _ 55 in in ADP IN _ _ _ _ _ 56 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 57 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 58 thymic thymic ADJ JJ Degree=Pos _ _ _ _ 59 organ organ ADJ JJ Degree=Pos _ _ _ _ 60 culture culture NOUN NN Number=Sing _ _ _ _ 61 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 62 FTOC FTOC NOUN NN Number=Sing _ _ _ SpaceAfter=No 63 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 64 . . PUNCT . _ _ _ _ _ # sent_id = 7642 # text = Here we document that overexpression of Id3, in progenitors that have initiated TCR gene rearrangements (pre-T cells), inhibits development into TCRalpha beta but not into TCRgamma delta T cells. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 document document VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Id3 Id3 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 progenitors progenitor NOUN NNS Number=Plur _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 initiated initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 TCR Tcr ADP IN _ _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 rearrangements rearrangement NOUN NNS Number=Plur _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 pre-T pre-t ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 inhibits inhibits NOUN NNS Number=Plur _ _ _ _ 23 development development VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 into into ADP IN _ _ _ _ _ 25 TCRalpha TCRalpha PROPN NNP Number=Sing _ _ _ _ 26 beta beta PROPN NNP Number=Sing _ _ _ _ 27 but but CCONJ CC _ _ _ _ _ 28 not not ADV RB _ _ _ _ _ 29 into into ADP IN _ _ _ _ _ 30 TCRgamma TCRgamma PROPN NNP Number=Sing _ _ _ _ 31 delta delta PROPN NNP Number=Sing _ _ _ _ 32 T T PROPN NNP Number=Sing _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 7643 # text = Furthermore, Id3 impedes expression of recombination activating genes and downregulates pre-Talpha mRNA. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Id3 Id3 NUM CD NumType=Card _ _ _ _ 4 impedes impede NOUN NNS Number=Plur _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 recombination recombination NOUN NN Number=Sing _ _ _ _ 8 activating activate VERB VBG VerbForm=Ger _ _ _ _ 9 genes gene NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 downregulates downregulate NOUN NNS Number=Plur _ _ _ _ 12 pre-Talpha pre-Talpha PROPN NNP Number=Sing _ _ _ _ 13 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 7644 # text = These observations suggest possible mechanisms by which Id3 overexpression can differentially affect development of pre-T cells into TCRalpha beta and gamma delta cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 possible possible ADJ JJ Degree=Pos _ _ _ _ 5 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 which which DET WDT PronType=Int _ _ _ _ 8 Id3 Id3 NOUN NN Number=Sing _ _ _ _ 9 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 10 can can AUX MD VerbForm=Fin _ _ _ _ 11 differentially differentially ADV RB _ _ _ _ _ 12 affect affect VERB VB VerbForm=Inf _ _ _ _ 13 development development NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 pre-T pre-t ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 into into ADP IN _ _ _ _ _ 18 TCRalpha TCRalpha PROPN NNP Number=Sing _ _ _ _ 19 beta beta PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 gamma gamma PROPN NNP Number=Sing _ _ _ _ 22 delta delta PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 7645 # text = We also observed that cell surface CD4(-)CD8(-)CD3(-) cells with rearranged TCR genes developed from Id3-transduced but not from control-transduced pre-T cells in an FTOC. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 surface surface NOUN NN Number=Sing _ _ _ _ 7 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 -) -) PUNCT . _ _ _ _ SpaceAfter=No 10 CD8 CD8 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 (-) (-) PUNCT . _ _ _ _ SpaceAfter=No 12 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 -) -) PUNCT . _ _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 rearranged rearrange VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 TCR Tcr NOUN NN Number=Sing _ _ _ _ 19 genes gene NOUN NNS Number=Plur _ _ _ _ 20 developed develop VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 Id3 Id3 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 transduced transduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 but but CCONJ CC _ _ _ _ _ 26 not not ADV RB _ _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 control control NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 transduced transduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 pre-T pre-t ADJ JJ Degree=Pos _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 FTOC FTOC NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 7646 # text = These cells had properties of both natural killer (NK) and pre-T cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 properties property NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 both both DET DT _ _ _ _ _ 7 natural natural ADJ JJ Degree=Pos _ _ _ _ 8 killer killer NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 NK NK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 pre-T pre-t ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 7647 # text = These findings suggest that bHLH factors are required to control T cell development after the T/NK developmental checkpoint. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 bHLH bhlh DET DT _ _ _ _ _ 6 factors factor NOUN NNS Number=Plur _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 control control VERB VB VerbForm=Inf _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 development development NOUN NN Number=Sing _ _ _ _ 14 after after ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 T/ t/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 NK NK PROPN NNP Number=Sing _ _ _ _ 18 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 19 checkpoint checkpoint NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7648 # text = Document 0030011156 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011156 0030011156 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7649 # text = Physical interactions between Ets and NF-kappaB/NFAT proteins play an important role in their cooperative activation of the human immunodeficiency virus enhancer in T cells. 1 Physical physical ADJ JJ Degree=Pos _ _ _ _ 2 interactions interaction NOUN NNS Number=Plur _ _ _ _ 3 between between ADP IN _ _ _ _ _ 4 Ets Ets PROPN NNPS Number=Plur _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 10 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 play play VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 important important ADJ JJ Degree=Pos _ _ _ _ 15 role role NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 cooperative cooperative ADJ JJ Degree=Pos _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 24 virus virus NOUN NN Number=Sing _ _ _ _ 25 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 T t PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7650 # text = The transcriptional regulatory elements of many inducible T-cell genes contain adjacent or overlapping binding sites for the Ets and NF-kappaB/NFAT families of transcription factors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 3 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 4 elements element NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 many many ADJ JJ Degree=Pos _ _ _ _ 7 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 8 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ _ 11 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 overlapping overlapp VERB VBG VerbForm=Ger _ _ _ _ 15 binding binding VERB VBG VerbForm=Ger _ _ _ _ 16 sites site NOUN NNS Number=Plur _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 Ets ets PROPN NNPS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 25 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 26 families family NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 7651 # text = Similar arrays of functionally important NF-kappaB/NFAT and Ets binding sites are present in the transcriptional enhancers of human immunodeficiency viruses types 1 and 2 (HIV-1 and HIV-2), suggesting that this pattern of nuclear protein binding sites reflects an evolutionarily conserved mechanism for regulating inducible T-cell gene expression that has been co-opted during HIV evolution. 1 Similar similar ADJ JJ Degree=Pos _ _ _ _ 2 arrays array NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 functionally functionally ADV RB _ _ _ _ _ 5 important important ADJ JJ Degree=Pos _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 10 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 Ets ets PROPN NNPS Number=Plur _ _ _ _ 13 binding binding VERB VBG VerbForm=Ger _ _ _ _ 14 sites site NOUN NNS Number=Plur _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 present present ADJ JJ Degree=Pos _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 20 enhancers enhancer NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 24 viruses viruse VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 types type NOUN NNS Number=Plur _ _ _ _ 26 1 1 NUM CD NumType=Card _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 2 2 NUM CD NumType=Card _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 40 that that SCONJ IN _ _ _ _ _ 41 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 42 pattern pattern NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 45 protein protein NOUN NN Number=Sing _ _ _ _ 46 binding bind VERB VBG VerbForm=Ger _ _ _ _ 47 sites site NOUN NNS Number=Plur _ _ _ _ 48 reflects reflect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 49 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 50 evolutionarily evolutionarily ADV RB _ _ _ _ _ 51 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 52 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 53 for for SCONJ IN _ _ _ _ _ 54 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 55 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 56 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 cell cell NOUN NN Number=Sing _ _ _ _ 58 gene gene NOUN NN Number=Sing _ _ _ _ 59 expression expression NOUN NN Number=Sing _ _ _ _ 60 that that PRON WDT PronType=Rel _ _ _ _ 61 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 62 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 63 co co X AFX _ _ _ _ SpaceAfter=No 64 -opted -opt VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 65 during during ADP IN _ _ _ _ _ 66 HIV Hiv PROPN NNP Number=Sing _ _ _ _ 67 evolution evolution NOUN NN Number=Sing _ _ _ SpaceAfter=No 68 . . PUNCT . _ _ _ _ _ # sent_id = 7652 # text = Despite these findings, the molecular mechanisms by which Ets and NF-kappaB/NFAT proteins cooperatively regulate inducible T-cell gene expression remained unknown. 1 Despite despite ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 findings findings NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 7 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 which which DET WDT PronType=Int _ _ _ _ 10 Ets Ets PROPN NNPS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 16 NFAT Nfat PROPN NNP Number=Sing _ _ _ _ 17 proteins protein NOUN NNS Number=Plur _ _ _ _ 18 cooperatively cooperatively ADV RB _ _ _ _ _ 19 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 20 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 21 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 7653 # text = In the studies described in this report, we demonstrated a physical interaction between multiple Ets and NF-kappaB/NFAT proteins both in vitro and in activated normal human T cells. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 10 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 physical physical ADJ JJ Degree=Pos _ _ _ _ 13 interaction interaction NOUN NN Number=Sing _ _ _ _ 14 between between ADP IN _ _ _ _ _ 15 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 16 Ets et PROPN NNPS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 22 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 23 proteins protein NOUN NNS Number=Plur _ _ _ _ 24 both both CCONJ CC _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 vitro vitro NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 activated activated VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 normal normal ADJ JJ Degree=Pos _ _ _ _ 31 human human ADJ JJ Degree=Pos _ _ _ _ 32 T t PROPN NNP Number=Sing _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 7654 # text = This interaction is mediated by the Ets domain of Ets proteins and the C-terminal region of the Rel homology domains of NF-kappaB/NFAT proteins. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 interaction interaction NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 Ets ets PROPN NNPS Number=Plur _ _ _ _ 8 domain domain NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 Ets ets NOUN NNS Number=Plur _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 C c NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 terminal terminal NOUN NN Number=Sing _ _ _ _ 17 region region NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 Rel Rel PROPN NNP Number=Sing _ _ _ _ 21 homology homology NOUN NN Number=Sing _ _ _ _ 22 domains domain NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 28 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 29 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 7655 # text = In addition, the Ets-NF-kappaB/NFAT interaction requires the presence of DNA binding sites for both proteins, as it is abolished by the DNA intercalating agents propidium iodide and ethidium bromide and enhanced by the presence of synthetic oligonucleotides containing binding sites for Ets and NF-kappaB proteins. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 Ets-NF Ets-NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 9 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 10 interaction interaction NOUN NN Number=Sing _ _ _ _ 11 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 presence presence NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 DNA dna NOUN NN Number=Sing _ _ _ _ 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 sites site NOUN NNS Number=Plur _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 both both DET DT _ _ _ _ _ 20 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 as as SCONJ IN _ _ _ _ _ 23 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 abolished abolish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 DNA dna NOUN NN Number=Sing _ _ _ _ 29 intercalating intercalat VERB VBG VerbForm=Ger _ _ _ _ 30 agents agent NOUN NNS Number=Plur _ _ _ _ 31 propidium propidium NOUN NN Number=Sing _ _ _ _ 32 iodide iodide NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 ethidium ethidium NOUN NN Number=Sing _ _ _ _ 35 bromide bromide NOUN NN Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 by by ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 presence presence NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 43 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 44 containing contain VERB VBG VerbForm=Ger _ _ _ _ 45 binding bind VERB VBG VerbForm=Ger _ _ _ _ 46 sites site NOUN NNS Number=Plur _ _ _ _ 47 for for ADP IN _ _ _ _ _ 48 Ets Ets PROPN NNP Number=Sing _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 53 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 7656 # text = A dominant-negative mutant of NF-kappaB p50 that binds DNA but fails to interact with Ets proteins inhibits the synergistic activation of the HIV-1 and HIV-2 enhancers by NF-kappaB (p50 + p65) and Ets-1, suggesting that physical interaction between Ets and NF-kappaB proteins is required for the transcriptional activity of the HIV-1 and HIV-2 enhancers. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 dominant dominant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 negative negative ADJ JJ Degree=Pos _ _ _ _ 5 mutant mutant NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 p50 p50 NOUN NN Number=Sing _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 DNA dna NOUN NN Number=Sing _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 fails fail NOUN NNS Number=Plur _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 interact interact VERB VB VerbForm=Inf _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 Ets ets PROPN NNP Number=Sing _ _ _ _ 20 proteins protein NOUN NNS Number=Plur _ _ _ _ 21 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 2 2 NUM CD NumType=Card _ _ _ _ 34 enhancers enhancer NOUN NNS Number=Plur _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 p50 p50 NUM CD NumType=Card _ _ _ _ 41 + + SYM SYM _ _ _ _ _ 42 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 Ets Ets NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 50 that that SCONJ IN _ _ _ _ _ 51 physical physical ADJ JJ Degree=Pos _ _ _ _ 52 interaction interaction NOUN NN Number=Sing _ _ _ _ 53 between between ADP IN _ _ _ _ _ 54 Ets Ets PROPN NNP Number=Sing _ _ _ _ 55 and and CCONJ CC _ _ _ _ _ 56 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 59 proteins protein NOUN NNS Number=Plur _ _ _ _ 60 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 61 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 62 for for ADP IN _ _ _ _ _ 63 the the DET DT Definite=Def|PronType=Art _ _ _ _ 64 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 65 activity activity NOUN NN Number=Sing _ _ _ _ 66 of of ADP IN _ _ _ _ _ 67 the the DET DT Definite=Def|PronType=Art _ _ _ _ 68 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 69 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 70 1 1 NUM CD NumType=Card _ _ _ _ 71 and and CCONJ CC _ _ _ _ _ 72 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 73 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 74 2 2 NUM CD NumType=Card _ _ _ _ 75 enhancers enhancer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 76 . . PUNCT . _ _ _ _ _ # sent_id = 7657 # text = Taken together, these findings suggest that evolutionarily conserved physical interactions between Ets and NF-kappaB/NFAT proteins are important in regulating the inducible expression of T-cell genes and viruses. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 findings finding NOUN NNS Number=Plur _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 evolutionarily evolutionarily ADV RB _ _ _ _ _ 9 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 physical physical ADJ JJ Degree=Pos _ _ _ _ 11 interactions interaction NOUN NNS Number=Plur _ _ _ _ 12 between between ADP IN _ _ _ _ _ 13 Ets Ets PROPN NNPS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 19 NFAT Nfat PROPN NNP Number=Sing _ _ _ _ 20 proteins protein NOUN NNS Number=Plur _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 important important ADJ JJ Degree=Pos _ _ _ _ 23 in in SCONJ IN _ _ _ _ _ 24 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 genes gene NOUN NNS Number=Plur _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 viruses viruse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 7658 # text = These interactions represent a potential target for the development of novel immunosuppressive and antiviral therapies. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 interactions interaction NOUN NNS Number=Plur _ _ _ _ 3 represent represent VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 potential potential ADJ JJ Degree=Pos _ _ _ _ 6 target target NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 development development NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 novel novel NOUN NN Number=Sing _ _ _ _ 12 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 antiviral antiviral ADJ JJ Degree=Pos _ _ _ _ 15 therapies therapy NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7659 # text = Document 0030011158 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011158 0030011158 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7660 # text = Human CD3-CD16+ natural killer cells express the hGATA-3 T cell transcription factor and an unrearranged 2.3-kb TcR delta transcript. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 CD3-CD Cd3-cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 16 16 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 + + SYM SYM _ _ _ _ _ 5 natural natural ADJ JJ Degree=Pos _ _ _ _ 6 killer killer NOUN NN Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 hGATA hGATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 -3 -3 NUM CD NumType=Card _ _ _ _ 12 T t NUM CD NumType=Card _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 unrearranged unrearrange ADJ JJ Degree=Pos _ _ _ _ 19 2.3 2.3 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kb kb NOUN NN Number=Sing _ _ _ _ 22 TcR TcR NOUN NN Number=Sing _ _ _ _ 23 delta delta ADP IN Abbr=Yes _ _ _ _ 24 transcript transcriep NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7661 # text = In this study we analyzed the T cell receptor(TcR) delta transcripts expressed by CD3-CD16+ cells and we investigated whether these cells expressed the hGATA-3 T cell transcription factor and the recombination-activating gene (RAG)-1. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 T T PROPN NNP Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 TcR TcR NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 delta delof NOUN NN Number=Sing _ _ _ _ 14 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 15 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 CD3-CD Cd3-cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 16 16 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 + + SYM SYM _ _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 23 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 whether whether SCONJ IN _ _ _ _ _ 25 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 hGATA hGATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 -3 -3 NUM CD NumType=Card _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 factor factor NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 recombination recombination NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 activating activate VERB VBG VerbForm=Ger _ _ _ _ 40 gene gene NOUN NN Number=Sing _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 RAG RAG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 44 - - SYM SYM _ _ _ _ SpaceAfter=No 45 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 7662 # text = Multiple TcR delta transcripts deriving from an unrearranged TcR delta gene were detected in both polyclonal and clonal CD3-CD16+ natural killer(NK) cell lines. 1 Multiple multiple PROPN NNP Number=Sing _ _ _ _ 2 TcR TcR PROPN NNP Number=Sing _ _ _ _ 3 delta delta PROPN NNP Number=Sing _ _ _ _ 4 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 5 deriving derive VERB VBG VerbForm=Ger _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 unrearranged unrearrange ADJ JJ Degree=Pos _ _ _ _ 9 TcR Tcr PROPN NNP Number=Sing _ _ _ _ 10 delta delof PROPN NNP Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 both both DET DT _ _ _ _ _ 16 polyclonal polyclonal ADJ JJ Degree=Pos _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 clonal clonal ADJ JJ Degree=Pos _ _ _ _ 19 CD3-CD Cd3-cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 16 16 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 + + SYM SYM _ _ _ _ _ 22 natural natural ADJ JJ Degree=Pos _ _ _ _ 23 killer killer NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 NK NK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 7663 # text = Two unrearranged TcR delta transcripts had a size similar to that of the functional TcR delta mRNA (2.3 and 1.3 kb) found in TcR gamma/delta+ 1 Two two NUM CD NumType=Card _ _ _ _ 2 unrearranged unrearrang ADJ JJ Degree=Pos _ _ _ _ 3 TcR TcR NOUN NN Number=Sing _ _ _ _ 4 delta delta NOUN NN Number=Sing _ _ _ _ 5 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 6 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 size size NOUN NN Number=Sing _ _ _ _ 9 similar similar ADJ JJ Degree=Pos _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 functional functional ADJ JJ Degree=Pos _ _ _ _ 15 TcR TcR PROPN NNP Number=Sing _ _ _ _ 16 delta delta PROPN NNP Number=Sing _ _ _ _ 17 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 2.3 2.3 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 1.3 1.3 NUM CD NumType=Card _ _ _ _ 22 kb kb NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 TcR TcR PROPN NNP Number=Sing _ _ _ _ 27 gamma gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 / / PUNCT , _ _ _ _ SpaceAfter=No 29 delta delta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 + + SYM NFP _ _ _ _ _ # sent_id = 7664 # text = T lymphocytes. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 . . PUNCT . _ _ _ _ _ # sent_id = 7665 # text = Sequence analysis of nine different 2.3-kb cDNA clones obtained from NK-derived polyA+ RNA confirmed that they corresponded to an unrearranged TcR delta gene. 1 Sequence sequence NOUN NN Number=Sing _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 nine nine NUM CD NumType=Card _ _ _ _ 5 different different ADJ JJ Degree=Pos _ _ _ _ 6 2.3 2.3 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kb kb NOUN NN Number=Sing _ _ _ _ 9 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 10 clones clone NOUN NNS Number=Plur _ _ _ _ 11 obtained obtain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 NK NK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 polyA polya PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 + + SYM SYM _ _ _ _ _ 18 RNA RNA PROPN NNP Number=Sing _ _ _ _ 19 confirmed confirm VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 22 corresponded correspond VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 unrearranged unrearrange ADJ JJ Degree=Pos _ _ _ _ 26 TcR Tcr NOUN NN Number=Sing _ _ _ _ 27 delta delof NOUN NN Number=Sing _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 7666 # text = These cDNA were 2343 bp long and their transcription initiation site was located 814 bp upstream from the J delta 1 segment. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 2343 2343 NUM CD NumType=Card _ _ _ _ 5 bp bp ADV RB _ _ _ _ _ 6 long long ADV RB Degree=Pos _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 initiation initiation NOUN NN Number=Sing _ _ _ _ 11 site site NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 814 814 NUM CD NumType=Card _ _ _ _ 15 bp bp NOUN NN Number=Sing _ _ _ _ 16 upstream upstream NOUN NN Number=Sing _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 J j PROPN NNP Number=Sing _ _ _ _ 20 delta delta NOUN NN Number=Sing _ _ _ _ 21 1 1 NUM CD NumType=Card _ _ _ _ 22 segment segment NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 7667 # text = The sequence located upstream of the J delta 1 segment corresponded to the previously reported germ-line sequence. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 sequence sequence NOUN NN Number=Sing _ _ _ _ 3 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 upstream upstream NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 J j PROPN NNP Number=Sing _ _ _ _ 8 delta delta PROPN NNP Number=Sing _ _ _ _ 9 1 1 NUM CD NumType=Card _ _ _ _ 10 segment segment NOUN NN Number=Sing _ _ _ _ 11 corresponded correspond VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 previously previously ADV RB _ _ _ _ _ 15 reported report VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 germ germ NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 line line NOUN NN Number=Sing _ _ _ _ 19 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 7668 # text = The J delta 1 segment was correctly spliced to C delta; in addition the four C delta exons were found to be already assembled. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 J j PROPN NNP Number=Sing _ _ _ _ 3 delta delta PROPN NNP Number=Sing _ _ _ _ 4 1 1 NUM CD NumType=Card _ _ _ _ 5 segment segment NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 correctly correctly ADV RB _ _ _ _ _ 8 spliced splice VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 C C PROPN NNP Number=Sing _ _ _ _ 11 delta delta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ; ; PUNCT , _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 addition addition NOUN NN Number=Sing _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 four four NUM CD NumType=Card _ _ _ _ 17 C C NOUN NN Number=Sing _ _ _ _ 18 delta delta PART TO Abbr=Yes _ _ _ _ 19 exons exon NOUN NNS Number=Plur _ _ _ _ 20 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 be be AUX VB VerbForm=Inf _ _ _ _ 24 already already ADV RB _ _ _ _ _ 25 assembled assemble VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 7669 # text = Two polyadenylation sites were present in the fourth C delta exon. 1 Two two NUM CD NumType=Card _ _ _ _ 2 polyadenylation polyadenylation NOUN NN Number=Sing _ _ _ _ 3 sites site NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 present present ADJ JJ Degree=Pos _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 fourth fourth ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 9 C C PROPN NNP Number=Sing _ _ _ _ 10 delta delta PROPN NNP Number=Sing _ _ _ _ 11 exon exon PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 7670 # text = However, only that located at the 3' end appeared to be utilized in the 2.3-kb cDNA. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 only only ADV RB _ _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 at at ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ' ' PART POS _ _ _ _ _ 10 end end NOUN NN Number=Sing _ _ _ _ 11 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 utilized utilize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 2.3 2.3 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kb kb NOUN NN Number=Sing _ _ _ _ 20 cDNA cDNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 7671 # text = The expression of hGATA-3, a T cell-specific factor known to be involved in the regulation of the transcription of TcR delta locus, was analyzed by Northern blot, in cultured NK cell population and clones (but not in freshly derived cell populations). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 hGATA hGATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 T T PROPN NNP Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 be be AUX VB VerbForm=Inf _ _ _ _ 17 involved involved ADJ JJ Degree=Pos _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 regulation regulation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 TcR TcR PROPN NNP Number=Sing _ _ _ _ 26 delta delta PROPN NNP Number=Sing _ _ _ _ 27 locus locus PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 Northern northern PROPN NNP Number=Sing _ _ _ _ 33 blot blot ADV RB _ _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 cultured culture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 NK NK PROPN NNP Number=Sing _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 population population NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 clones clone NOUN NNS Number=Plur _ _ _ _ 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 but but CCONJ CC _ _ _ _ _ 44 not not PART RB _ _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 freshly freshly ADV RB _ _ _ _ _ 47 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 48 cell cell NOUN NN Number=Sing _ _ _ _ 49 populations population NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 7672 # text = All NK clones and cell lines studied were found to express hGATA-3-specific mRNA, suggesting that hGATA-3 may be involved in the regulation of the unrearranged TcR delta gene expression in NK cells. 1 All all DET DT _ _ _ _ _ 2 NK NK PROPN NNP Number=Sing _ _ _ _ 3 clones clone NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 lines line NOUN NNS Number=Plur _ _ _ _ 7 studied studie VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 express express VERB VB VerbForm=Inf _ _ _ _ 12 hGATA hGATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 hGATA hGATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - SYM SYM _ _ _ _ SpaceAfter=No 23 3 3 NUM CD NumType=Card _ _ _ _ 24 may may AUX MD VerbForm=Fin _ _ _ _ 25 be be AUX VB VerbForm=Inf _ _ _ _ 26 involved involved ADJ JJ Degree=Pos _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 regulation regulation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 unrearranged unrearrange ADJ JJ Degree=Pos _ _ _ _ 33 TcR TcR NOUN NN Number=Sing _ _ _ _ 34 delta delta NOUN NN Number=Sing _ _ _ _ 35 gene gene NOUN NN Number=Sing _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 NK NK PROPN NNP Number=Sing _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 7673 # text = Finally, no transcription of the RAG-1 gene could be detected in all NK cell lines or clones analyzed. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 no no DET DT _ _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 RAG RAG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 could could AUX MD VerbForm=Fin _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 all all DET DT _ _ _ _ _ 16 NK NK PROPN NNP Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 lines line NOUN NNS Number=Plur _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 clones clone NOUN NNS Number=Plur _ _ _ _ 21 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7674 # text = Document 0030011160 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011160 0030011160 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7675 # text = NF-AT activation induced by a CAML-interacting member of the tumor necrosis factor receptor superfamily. 1 NF Nf ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 AT at ADJ JJ Degree=Pos _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 CAML caml NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 interacting interacting VERB VBG VerbForm=Ger _ _ _ _ 11 member member NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 tumor tumor NOUN NN Number=Sing _ _ _ _ 15 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 superfamily superfamily ADV RB _ _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7676 # text = Activation of the nuclear factor of activated T cells transcription factor (NF-AT) is a key event underlying lymphocyte action. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 AT at PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 key key ADJ JJ Degree=Pos _ _ _ _ 20 event event NOUN NN Number=Sing _ _ _ _ 21 underlying underly ADJ JJ Degree=Pos _ _ _ _ 22 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 23 action action NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 7677 # text = The CAML (calcium-modulator and cyclophilin ligand) protein is a coinducer of NF-AT activation when overexpressed in Jurkat T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 CAML caml NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 modulator modulator NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 cyclophilin cyclophilin NOUN NN Number=Sing _ _ _ _ 9 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 coinducer coinducer NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 AT AT PROPN NNP Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 when when ADV WRB PronType=Int _ _ _ _ 21 overexpressed overexpress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 24 T T PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 7678 # text = A member of the tumor necrosis factor receptor superfamily was isolated by virtue of its affinity for CAML. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 member member NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 tumor tumor NOUN NN Number=Sing _ _ _ _ 6 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 superfamily superfamily ADV RB _ _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 isolated isolate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 virtue virtue NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 affinity affinity NOUN NN Number=Sing _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 CAML CAML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 7679 # text = Cross-linking of this lymphocyte-specific protein, designated TACI (transmembrane activator and CAML-interactor), on the surface of transfected Jurkat cells with TACI-specific antibodies led to activation of the transcription factors NF-AT, AP-1, and NFkappaB. 1 Cross cross ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 linking linking NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 TACI Taci NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 transmembrane transmembrane NOUN NN Number=Sing _ _ _ _ 15 activator activator NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 CAML caml NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 interactor interactor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 on on ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 surface surface NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 TACI TACI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 specific specific ADJ JJ Degree=Pos _ _ _ _ 33 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 34 led lead VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 activation activation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 transcription transcription NOUN NN Number=Sing _ _ _ _ 40 factors factor NOUN NNS Number=Plur _ _ _ _ 41 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 7680 # text = TACI-induced activation of NF-AT was specifically blocked by a dominant-negative CAML mutant, thus implicating CAML as a signaling intermediate. 1 TACI Taci NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 AT AT PROPN NNP Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 specifically specifically ADV RB _ _ _ _ _ 11 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 dominant dominant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 negative negative ADJ JJ Degree=Pos _ _ _ _ 17 CAML caml NOUN NN Number=Sing _ _ _ _ 18 mutant mutant NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 thus thus ADV RB _ _ _ _ _ 21 implicating implicate VERB VBG VerbForm=Ger _ _ _ _ 22 CAML CAML NOUN NN Number=Sing _ _ _ _ 23 as as ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 signaling signaling NOUN NN Number=Sing _ _ _ _ 26 intermediate intermediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7681 # text = Document 0030011161 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011161 0030011161 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7682 # text = Distinct mechanisms for N-acetylcysteine inhibition of cytokine-induced E-selectin and VCAM-1 expression. 1 Distinct distinct ADJ JJ Degree=Pos _ _ _ _ 2 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 acetylcysteine acetylcysteine NOUN NN Number=Sing _ _ _ _ 6 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 selectin selectin NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7683 # text = We have examined the effects of N-acetyl-L-cysteine (NAC), a well-characterized, thiol-containing antioxidant, on agonist-induced monocytic cell adhesion to endothelial cells (EC). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 acetyl acetyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 -L -l NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 NAC NAC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 well well ADV RB Degree=Pos _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 thiol thiol NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 containing containing VERB VBG VerbForm=Ger _ _ _ _ 24 antioxidant antioxidant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 agonist agonist ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 7684 # text = NAC inhibited interleukin-1 (IL-1 beta)-induced, but not basal, adhesion with 50% inhibition at approximately 20 mM. 1 NAC NAC X LS _ _ _ _ _ 2 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 induced induced VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 not not ADV RB _ _ _ _ _ 17 basal basal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 % % SYM NN Number=Sing _ _ _ _ 23 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 24 at at ADP IN _ _ _ _ _ 25 approximately approximately ADV RB _ _ _ _ _ 26 20 20 NUM CD NumType=Card _ _ _ _ 27 mM mm NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 7685 # text = Monocytic cell adhesion to EC in response to tumor necrosis factor-alpha (TNF-alpha), lipopolysaccharide (LPS), alpha-thrombin, or phorbol 12-myristate 13-acetate (PMA) was similarly inhibited by NAC. 1 Monocytic Monocytic ADJ JJ Degree=Pos _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 EC EC PROPN NNP Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 response response NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 tumor tumor NOUN NN Number=Sing _ _ _ _ 10 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 LPS Lp INTJ UH _ _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 26 -thrombin -thrombin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 30 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - PUNCT : _ _ _ _ SpaceAfter=No 32 myristate myristate NOUN NN Number=Sing _ _ _ _ 33 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 - - PUNCT : _ _ _ _ SpaceAfter=No 35 acetate acetate NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 40 similarly similarly ADV RB _ _ _ _ _ 41 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 42 by by ADP IN _ _ _ _ _ 43 NAC NAC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 7686 # text = Unlike published studies with pyrrolidinedithiocarbamate, which specifically inhibited vascular cell adhesion molecule 1 (VCAM-1), NAC inhibited IL-1 beta-induced mRNA and cell surface expression of both E-selectin and VCAM-1. 1 Unlike unlike ADP IN _ _ _ _ _ 2 published publish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 pyrrolidinedithiocarbamate pyrrolidinedithiocarbamate NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 specifically specifically ADV RB _ _ _ _ _ 9 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 13 molecule molecule NOUN NN Number=Sing _ _ _ _ 14 1 1 NUM CD NumType=Card _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 NAC NAC PROPN NNP Number=Sing _ _ _ _ 22 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 surface surface NOUN NN Number=Sing _ _ _ _ 33 expression expression NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 both both DET DT _ _ _ _ _ 36 E- E- NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 selectin selectin NOUN NN Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 7687 # text = NAC had no effect on the half-life of E-selectin or VCAM-1 mRNA. 1 NAC NAC PROPN NNP Number=Sing _ _ _ _ 2 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 no no DET DT _ _ _ _ _ 4 effect effect NOUN NN Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 half half NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 life life NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 E-selectin E-selectin PROPN NNP Number=Sing _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 7688 # text = Although NAC reduced nuclear factor-kappa B (NF-kappa B) activation in EC as measured by gel-shift assays using an oligonucleotide probe corresponding to the consensus NF-kappa B binding sites of the VCAM-1 gene (VCAM-NF-kappa B), the antioxidant had no appreciable effect when an oligomer corresponding to the consensus NF-kappa B binding site of the E-selectin gene (E-selectin-NF-kappa B) was used. 1 Although although SCONJ IN _ _ _ _ _ 2 NAC NAC PROPN NNP Number=Sing _ _ _ _ 3 reduced reduce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 EC EC PROPN NNP Number=Sing _ _ _ _ 18 as as SCONJ IN _ _ _ _ _ 19 measured measure VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 gel gel NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 shift shift NOUN NN Number=Sing _ _ _ _ 24 assays assay NOUN NNS Number=Plur _ _ _ _ 25 using use VERB VBG VerbForm=Ger _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 oligonucleotide oligonucleotide NOUN NN Number=Sing _ _ _ _ 28 probe probe NOUN NN Number=Sing _ _ _ _ 29 corresponding correspond VERB VBG VerbForm=Ger _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 consensus consensus NOUN NN Number=Sing _ _ _ _ 33 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 kappa kappa NOUN NN Number=Sing _ _ _ _ 36 B b NOUN NN Number=Sing _ _ _ _ 37 binding bind VERB VBG VerbForm=Ger _ _ _ _ 38 sites site NOUN NNS Number=Plur _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 VCAM VCAm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 1 1 NUM CD NumType=Card _ _ _ _ 44 gene gene NOUN NN Number=Sing _ _ _ _ 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 kappa kappa NOUN NN Number=Sing _ _ _ _ 51 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 53 , , PUNCT , _ _ _ _ _ 54 the the DET DT Definite=Def|PronType=Art _ _ _ _ 55 antioxidant antioxidant NOUN NN Number=Sing _ _ _ _ 56 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 57 no no DET DT _ _ _ _ _ 58 appreciable appreciable ADJ JJ Degree=Pos _ _ _ _ 59 effect effect NOUN NN Number=Sing _ _ _ _ 60 when when ADV WRB PronType=Int _ _ _ _ 61 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 62 oligomer oligomer NOUN NN Number=Sing _ _ _ _ 63 corresponding correspond VERB VBG VerbForm=Ger _ _ _ _ 64 to to ADP IN _ _ _ _ _ 65 the the DET DT Definite=Def|PronType=Art _ _ _ _ 66 consensus consensus NOUN NN Number=Sing _ _ _ _ 67 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 68 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 69 kappa kappa NOUN NN Number=Sing _ _ _ _ 70 B b NOUN NN Number=Sing _ _ _ _ 71 binding bind VERB VBG VerbForm=Ger _ _ _ _ 72 site site NOUN NN Number=Sing _ _ _ _ 73 of of ADP IN _ _ _ _ _ 74 the the DET DT Definite=Def|PronType=Art _ _ _ _ 75 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 76 selectin selectin NOUN NN Number=Sing _ _ _ _ 77 gene gene NOUN NN Number=Sing _ _ _ _ 78 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 79 E- E- NOUN NN Number=Sing _ _ _ SpaceAfter=No 80 selectin selectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 81 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 82 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 83 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 84 kappa kappa NOUN NN Number=Sing _ _ _ _ 85 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 86 ) ) PUNCT -RRB- _ _ _ _ _ 87 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 88 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 89 . . PUNCT . _ _ _ _ _ # sent_id = 7689 # text = Because NF-kappa 1 Because because SCONJ IN _ _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa PROPN NNP Number=Sing _ _ _ _ # sent_id = 7690 # text = B has been reported to be redox sensitive, we studied the effects of NAC on the EC redox environment. 1 B b NOUN NN Number=Sing _ _ _ _ 2 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 4 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 redox redox ADV RB _ _ _ _ _ 8 sensitive sensitive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 effects effect NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 NAC NAC PROPN NNP Number=Sing _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 EC EC PROPN NNP Number=Sing _ _ _ _ 19 redox redox NOUN NN Number=Sing _ _ _ _ 20 environment environment NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 7691 # text = NAC caused an expected dramatic increase in the reduced glutathione (GSH) levels in EC. 1 NAC NAC PROPN NNP Number=Sing _ _ _ _ 2 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 expected expect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 dramatic dramatic ADJ JJ Degree=Pos _ _ _ _ 6 increase increase NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 glutathione glutathione NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 GSH GSH NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 levels level NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 7692 # text = In vitro studies demonstrated that whereas the binding affinity of NF-kappa B to the VCAM-NF-kappa B oligomer peaked at a GSH-to-oxidized glutathione (GSSG) ratio of approximately 200 and decreased at higher ratios, the binding to the E-selectin-NF-kappa B oligomer appeared relatively unaffected even at ratios > 400, i.e., those achieved in EC treated with 40 mM NAC. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 whereas whereas SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 affinity affinity NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 VCAM VCAm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa PROPN NNP Number=Sing _ _ _ _ 22 B b PROPN NNP Number=Sing _ _ _ _ 23 oligomer oligomer NOUN NN Number=Sing _ _ _ _ 24 peaked peake VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 at at ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 GSH GSH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 to to ADP IN _ _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 oxidized oxidize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 glutathione glutathione NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 GSSG GSSG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 ratio ratio NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 approximately approximately ADV RB _ _ _ _ _ 39 200 200 NUM CD NumType=Card _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 at at ADP IN _ _ _ _ _ 43 higher higher ADJ JJR Degree=Cmp _ _ _ _ 44 ratios ratio NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 binding binding VERB VBG VerbForm=Ger _ _ _ _ 48 to to ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 E-selectin E-selectin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 54 kappa kappa PROPN NNP Number=Sing _ _ _ _ 55 B b PROPN NNP Number=Sing _ _ _ _ 56 oligomer oligomer NOUN NN Number=Sing _ _ _ _ 57 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 58 relatively relatively ADV RB _ _ _ _ _ 59 unaffected unaffected ADJ JJ Degree=Pos _ _ _ _ 60 even even ADV RB _ _ _ _ _ 61 at at ADP IN _ _ _ _ _ 62 ratios ratio NOUN NNS Number=Plur _ _ _ _ 63 > > PUNCT , _ _ _ _ _ 64 400 400 NUM CD NumType=Card _ _ _ SpaceAfter=No 65 , , PUNCT , _ _ _ _ _ 66 i.e. i.e. X FW _ _ _ _ SpaceAfter=No 67 , , PUNCT , _ _ _ _ _ 68 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 69 achieved achieve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 70 in in ADP IN _ _ _ _ _ 71 EC EC PROPN NNP Number=Sing _ _ _ _ 72 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 73 with with ADP IN _ _ _ _ _ 74 40 40 NUM CD NumType=Card _ _ _ _ 75 mM mm PROPN NNP Number=Sing _ _ _ _ 76 NAC NAC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 77 . . PUNCT . _ _ _ _ _ # sent_id = 7693 # text = These results suggest that NF-kappa B binding to its consensus sequences in the VCAM-1 and E-selectin gene exhibits marked differences in redox sensitivity, allowing for differential gene expression regulated by the same transcription factor. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 12 consensus consensus NOUN NN Number=Sing _ _ _ _ 13 sequences sequence NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 E- E- SYM SYM _ _ _ _ SpaceAfter=No 21 selectin selectin ADJ JJ Degree=Pos _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 exhibits exhibit NOUN NNS Number=Plur _ _ _ _ 24 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 differences difference NOUN NNS Number=Plur _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 redox redox NOUN NN Number=Sing _ _ _ _ 28 sensitivity sensitivity NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 allowing allow VERB VBG VerbForm=Ger _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 differential differential ADJ JJ Degree=Pos _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ _ 35 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 same same ADJ JJ Degree=Pos _ _ _ _ 39 transcription transcription NOUN NN Number=Sing _ _ _ _ 40 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 7694 # text = Our data also demonstrate that NAC increases the GSH-to-GSSG ratio within the EC suggesting one possible mechanism through which this antioxidant inhibits agonist-induced monocyte adhesion to EC. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 NAC NAC PROPN NNP Number=Sing _ _ _ _ 7 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 GSH GSH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 to to ADP IN _ _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 GSSG GSSG PROPN NNP Number=Sing _ _ _ _ 14 ratio ratio NOUN NN Number=Sing _ _ _ _ 15 within within ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 EC EC PROPN NNP Number=Sing _ _ _ _ 18 suggesting suggest NOUN NN Number=Sing _ _ _ _ 19 one one NUM CD NumType=Card _ _ _ _ 20 possible possible ADJ JJ Degree=Pos _ _ _ _ 21 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 22 through through ADP IN _ _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 25 antioxidant antioxidant NOUN NN Number=Sing _ _ _ _ 26 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 agonist agonist ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 31 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7695 # text = Document 0030011166 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011166 0030011166 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7696 # text = Dual effects of LPS antibodies on cellular uptake of LPS and LPS-induced proinflammatory functions. 1 Dual dual ADJ JJ Degree=Pos _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 5 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 8 uptake uptake NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 LPS LPS NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 16 functions function NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7697 # text = Human phagocytes recognize bacterial LPS (endotoxin) through membrane CD14 (mCD14), a proinflammatory LPS receptor. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 phagocytes phagocyte NOUN NNS Number=Plur _ _ _ _ 3 recognize recognize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 5 LPS Lps NOUN NNS Number=Plur _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 endotoxin endotoxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 through through ADP IN _ _ _ _ _ 10 membrane membrane NOUN NN Number=Sing _ _ _ _ 11 CD14 CD14 PROPN NNP Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 mCD14 mCD14 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 18 LPS Lps NOUN NN Number=Sing _ _ _ _ 19 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 7698 # text = This study tested the hypothesis that anti-LPS Abs neutralize endotoxin by blocking cellular uptake through mCD14. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 tested test VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 6 that that ADV WRB PronType=Rel _ _ _ _ 7 anti-LPS anti-LPS ADJ JJ Degree=Pos _ _ _ _ 8 Abs Abs PROPN NNPS Number=Plur _ _ _ _ 9 neutralize neutralize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 endotoxin endotoxin ADV RB _ _ _ _ _ 11 by by SCONJ IN _ _ _ _ _ 12 blocking block VERB VBG VerbForm=Ger _ _ _ _ 13 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 14 uptake uptake NOUN NN Number=Sing _ _ _ _ 15 through through ADP IN _ _ _ _ _ 16 mCD mCD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 14 14 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 7699 # text = Ab-associated changes in the uptake and cellular distribution of FITC-LPS were assessed by flow cytometry and laser scanning confocal microscopy in human CD14-transfected Chinese hamster ovary fibroblasts (CHO-CD14 cells) and human peripheral blood monocytes. 1 Ab- Ab- SYM NFP _ _ _ _ SpaceAfter=No 2 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 changes change NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 uptake uptake NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 9 distribution distribution NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 FITC FITC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 LPS LPS PROPN NNP Number=Sing _ _ _ _ 14 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 assessed assess VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 flow flow NOUN NN Number=Sing _ _ _ _ 18 cytometry cytometry NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 laser laser NOUN NN Number=Sing _ _ _ _ 21 scanning scan VERB VBG VerbForm=Ger _ _ _ _ 22 confocal confocal ADJ JJ Degree=Pos _ _ _ _ 23 microscopy microscopy NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 CD14 CD14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 Chinese chinese ADJ JJ Degree=Pos _ _ _ _ 30 hamster hamster NOUN NN Number=Sing _ _ _ _ 31 ovary ovary ADJ JJ Degree=Pos _ _ _ _ 32 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 CHO cho PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 14 14 NUM CD NumType=Card _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 human human ADJ JJ Degree=Pos _ _ _ _ 42 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 43 blood blood NOUN NN Number=Sing _ _ _ _ 44 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 7700 # text = LPS core- and O-side chain-specific mAbs inhibited mCD14-mediated LPS uptake by both cell types in the presence of serum. 1 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 2 core core NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 O- O- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 side side NOUN NN Number=Sing _ _ _ _ 7 chain chain NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 mAbs mAb NOUN NNS Number=Plur _ _ _ _ 11 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 mCD14 mcd14 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 -mediated -mediate ADJ JJ Degree=Pos _ _ _ _ 14 LPS Lp NOUN NNS Number=Plur _ _ _ _ 15 uptake uptake VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 both both DET DT _ _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 types type NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 presence presence NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 serum serum NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 7701 # text = O-side chain-specific mAb concurrently enhanced complement-dependent LPS uptake by monocytes through complement receptor-1 (CR1) and uptake by CHO-CD14 cells involving another heat-labile serum factor(s) and cell-associated recognition molecule(s). 1 O of INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 side side NOUN NN Number=Sing _ _ _ _ 4 chain chain NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 specific specific ADJ JJ Degree=Pos _ _ _ _ 7 mAb mAb PROPN NNP Number=Sing _ _ _ _ 8 concurrently concurrently ADV RB _ _ _ _ _ 9 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 complement complement NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 13 LPS Lps NOUN NN Number=Sing _ _ _ _ 14 uptake uptake NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 17 through through ADP IN _ _ _ _ _ 18 complement complement NOUN NN Number=Sing _ _ _ _ 19 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 CR1 Cr1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 uptake uptake NOUN NN Number=Sing _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 CHO cho PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 14 14 NUM CD NumType=Card _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 involving involve VERB VBG VerbForm=Ger _ _ _ _ 34 another another DET DT _ _ _ _ _ 35 heat heat NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 labile labile NOUN NN Number=Sing _ _ _ _ 38 serum serum NOUN NN Number=Sing _ _ _ _ 39 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 s s X AFX _ _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 recognition recognition NOUN NN Number=Sing _ _ _ _ 48 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 50 s s X AFX _ _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 7702 # text = Core-specific mAb inhibited mCD14-mediated uptake of homologous and heterologous LPS, while producing less concurrent enhancement of non-mCD14-mediated LPS uptake. 1 Core- Core- SYM NFP _ _ _ _ SpaceAfter=No 2 specific specific ADJ JJ Degree=Pos _ _ _ _ 3 mAb mAb PROPN NNP Number=Sing _ _ _ _ 4 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 mCD14 mCD14 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 uptake uptake NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 13 LPS Lp NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 while while SCONJ IN _ _ _ _ _ 16 producing produce VERB VBG VerbForm=Ger _ _ _ _ 17 less less ADJ JJR Degree=Cmp _ _ _ _ 18 concurrent concurrent ADJ JJ Degree=Pos _ _ _ _ 19 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 non-mCD14 non-mCD14 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 -mediated -mediated ADJ JJ Degree=Pos _ _ _ _ 23 LPS Lp NOUN NN Number=Sing _ _ _ _ 24 uptake uptake NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 7703 # text = The modulation by anti-LPS mAbs of mCD14-mediated LPS uptake was associated with inhibition of LPS-induced nuclear factor-kappaB (NF-kappaB) translocation and TNF-alpha secretion in CHO-CD14 cells and monocytes, respectively, while mAb enhancement of non-mCD14-mediated LPS uptake stimulated these activities. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 modulation modulation NOUN NN Number=Sing _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 anti-LPS anti-LPS ADJ JJ Degree=Pos _ _ _ _ 5 mAbs mAbs NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 mCD14 mCD14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 -mediated -mediated VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 LPS Lps PROPN NNP Number=Sing _ _ _ _ 10 uptake uptake PROPN NNP Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 translocation translocation NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 alpha alpha NOUN NN Number=Sing _ _ _ _ 33 secretion secretion NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 CHO cho PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 14 14 NUM CD NumType=Card _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 while while SCONJ IN _ _ _ _ _ 46 mAb mAb PROPN NNP Number=Sing _ _ _ _ 47 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 non-mCD14 non-mCD14 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 -mediated -mediated ADJ JJ Degree=Pos _ _ _ _ 51 LPS Lp NOUN NNS Number=Plur _ _ _ _ 52 uptake uptake NOUN NN Number=Sing _ _ _ _ 53 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 54 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 55 activities activity NOUN NNS Number=Plur _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 7704 # text = LPS-specific 1 LPS Lp NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 specific specific ADJ JJ Degree=Pos _ _ _ _ # sent_id = 7705 # text = Abs thus mediate anti-inflammatory and proinflammatory functions, respectively, by preventing target cell uptake of LPS through mCD14 and augmenting uptake through CR1 or other cell receptors. 1 Abs Ab ADV RB _ _ _ _ _ 2 thus thus ADV RB _ _ _ _ _ 3 mediate mediate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 7 functions function NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 by by SCONJ IN _ _ _ _ _ 12 preventing prevent VERB VBG VerbForm=Ger _ _ _ _ 13 target target NOUN NN Number=Sing _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 uptake uptake NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 LPS LPS PROPN NNP Number=Sing _ _ _ _ 18 through through ADP IN _ _ _ _ _ 19 mCD14 mCD14 PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 augmenting augment VERB VBG VerbForm=Ger _ _ _ _ 22 uptake uptake NOUN NN Number=Sing _ _ _ _ 23 through through ADP IN _ _ _ _ _ 24 CR1 Cr1 PROPN NNP Number=Sing _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 other other ADJ JJ Degree=Pos _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7706 # text = Document 0030011171 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011171 0030011171 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7707 # text = Increased IkappaB expression and diminished nuclear NF-kappaB in human mononuclear cells following hydrocortisone injection. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 IkappaB Ikappab NOUN NN Number=Sing _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 diminished diminish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 following follow VERB VBG VerbForm=Ger _ _ _ _ 15 hydrocortisone hydrocortisone ADJ JJ Degree=Pos _ _ _ _ 16 injection injection NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7708 # text = We have recently demonstrated that hydrocortisone and other glucocorticoids inhibit reactive oxygen species (ROS) generation by mononuclear (MNC) and polymorphonuclear leucocytes (PMNL). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 recently recently ADV RB _ _ _ _ _ 4 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 hydrocortisone hydrocortisone NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 other other ADJ JJ Degree=Pos _ _ _ _ 9 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 10 inhibit inhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 12 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 13 species species NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 ROS ROS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 generation generation NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 mononuclear mononuclear NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 MNC MNC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 polymorphonuclear polymorphonuclear ADJ JJ Degree=Pos _ _ _ _ 25 leucocytes leucocyte NOUN NNS Number=Plur _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 PMNL PMNL NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 7709 # text = Since NF-kappaB/IkappaB system regulates the transcription of proinflammatory genes, including those responsible for ROS generation, we tested the hypothesis that hydrocortisone may stimulate IkappaB production thus inhibiting NF-kappaB translocation from the cytosol into the nucleus in MNC, in vivo. 1 Since since ADP IN _ _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 6 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ _ 7 system system NOUN NN Number=Sing _ _ _ _ 8 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 including include VERB VBG VerbForm=Ger _ _ _ _ 16 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 17 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 ROS Ros NOUN NN Number=Sing _ _ _ _ 20 generation generation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 23 tested test VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 hydrocortisone hydrocortisone PRON NN Number=Sing _ _ _ _ 28 may may AUX MD VerbForm=Fin _ _ _ _ 29 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 30 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ _ 31 production production NOUN NN Number=Sing _ _ _ _ 32 thus thus ADV RB _ _ _ _ _ 33 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 34 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 37 translocation translocation NOUN NN Number=Sing _ _ _ _ 38 from from ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 41 into into ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 MNC MNC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 7710 # text = One hundred milligram of hydrocortisone was injected intravenously into 4 normal subjects. 1 One one NUM CD NumType=Card _ _ _ _ 2 hundred hundred NUM CD NumType=Card _ _ _ _ 3 milligram milligram NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 hydrocortisone hydrocortisone NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 injected inject VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 intravenously intravenously ADV RB _ _ _ _ _ 9 into into ADP IN _ _ _ _ _ 10 4 4 NUM CD NumType=Card _ _ _ _ 11 normal normal ADJ JJ Degree=Pos _ _ _ _ 12 subjects subjects NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 7711 # text = Blood samples were obtained prior to the injection and at 1, 2, 4, 8 and 24 hr after the injection. 1 Blood Blood ADJ JJ Degree=Pos _ _ _ _ 2 samples sample NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 obtained obtain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 prior prior ADJ JJ Degree=Pos _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 injection injection NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 at at ADP IN _ _ _ _ _ 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 8 8 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 24 24 NUM CD NumType=Card _ _ _ _ 20 hr hr NOUN NN Number=Sing _ _ _ _ 21 after after ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 injection injection NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 7712 # text = Nuclear extracts and total cell lysates were prepared from MNC by standard techniques. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 extracts extract NOUN NNS Number=Plur _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 total total ADJ JJ Degree=Pos _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 lysates lysate NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 prepared prepare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 MNC MNC PROPN NNP Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 standard standard ADJ JJ Degree=Pos _ _ _ _ 13 techniques technique NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 7713 # text = IkappaB 1 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ _ # sent_id = 7714 # text = levels in MNC homogenates increased at 1 hr, peaked at 2-4 hr, started to decrease at 8 hr, and returned to baseline levels at 24 hr. 1 levels level NOUN NNS Number=Plur _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 MNC MNC PROPN NNP Number=Sing _ _ _ _ 4 homogenates homogenate NOUN NNS Number=Plur _ _ _ _ 5 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 at at ADP IN _ _ _ _ _ 7 1 1 NUM CD NumType=Card _ _ _ _ 8 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 peaked peake VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 at at ADP IN _ _ _ _ _ 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - SYM SYM _ _ _ _ SpaceAfter=No 14 4 4 NUM CD NumType=Card _ _ _ _ 15 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 started start VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 decrease decrease VERB VB VerbForm=Inf _ _ _ _ 20 at at ADP IN _ _ _ _ _ 21 8 8 NUM CD NumType=Card _ _ _ _ 22 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 returned return VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 baseline baseline NOUN NN Number=Sing _ _ _ _ 28 levels level NOUN NNS Number=Plur _ _ _ _ 29 at at ADP IN _ _ _ _ _ 30 24 24 NUM CD NumType=Card _ _ _ _ 31 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 7715 # text = NF-kappaB in MNC nuclear extracts decreased at 1 hr, reached a nadir at 4 hr, gradually increased at 8 hr and returned back to baseline levels at 24 hr. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 MNC MNC PROPN NNP Number=Sing _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 extracts extract NOUN NNS Number=Plur _ _ _ _ 8 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 at at ADP IN _ _ _ _ _ 10 1 1 NUM CD NumType=Card _ _ _ _ 11 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 reached reach VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 nadir nadir NOUN NN Number=Sing _ _ _ _ 16 at at ADP IN _ _ _ _ _ 17 4 4 NUM CD NumType=Card _ _ _ _ 18 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 gradually gradually ADV RB _ _ _ _ _ 21 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 at at ADP IN _ _ _ _ _ 23 8 8 NUM CD NumType=Card _ _ _ _ 24 hr hr NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 returned return VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 back back ADV RB _ _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 baseline baseline NOUN NN Number=Sing _ _ _ _ 30 levels level NOUN NNS Number=Plur _ _ _ _ 31 at at ADP IN _ _ _ _ _ 32 24 24 NUM CD NumType=Card _ _ _ _ 33 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 7716 # text = The total protein content of NF-kappaB subunit (P65) in MNC lysates also showed a decrease following hydrocortisone injection. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 total total ADJ JJ Degree=Pos _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 content content NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 subunit subunit NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 P65 P65 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 MNC MNC PROPN NNP Number=Sing _ _ _ _ 15 lysates lysates PROPN NNP Number=Sing _ _ _ _ 16 also also ADV RB _ _ _ _ _ 17 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 decrease decrease NOUN NN Number=Sing _ _ _ _ 20 following follow VERB VBG VerbForm=Ger _ _ _ _ 21 hydrocortisone hydrocortisone ADJ JJ Degree=Pos _ _ _ _ 22 injection injection NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 7717 # text = This decrease was observed at 2 hr, reached a nadir at 4 hr, and returned to baseline levels at 24 hr. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 decrease decrease NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 at at ADP IN _ _ _ _ _ 6 2 2 NUM CD NumType=Card _ _ _ _ 7 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 reached reach VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 nadir nadir NOUN NN Number=Sing _ _ _ _ 12 at at ADP IN _ _ _ _ _ 13 4 4 NUM CD NumType=Card _ _ _ _ 14 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 returned return VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 baseline baseline VERB VB VerbForm=Inf _ _ _ _ 20 levels level NOUN NNS Number=Plur _ _ _ _ 21 at at ADP IN _ _ _ _ _ 22 24 24 NUM CD NumType=Card _ _ _ _ 23 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 7718 # text = ROS generation inhibition paralleled NF-kappaB levels in the nucleus. 1 ROS Ros NOUN NN Number=Sing _ _ _ _ 2 generation generation NOUN NN Number=Sing _ _ _ _ 3 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 4 paralleled parallel VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 7719 # text = It was inhibited at 1 hr, reached a nadir at 2-4 hr, started to increase at 8 hr, and returned to basal levels at 24 hr. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 at at ADP IN _ _ _ _ _ 5 1 1 NUM CD NumType=Card _ _ _ _ 6 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 reached reach VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 nadir nadir NOUN NN Number=Sing _ _ _ _ 11 at at ADP IN _ _ _ _ _ 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - SYM SYM _ _ _ _ SpaceAfter=No 14 4 4 NUM CD NumType=Card _ _ _ _ 15 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 started start VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 increase increase VERB VB VerbForm=Inf _ _ _ _ 20 at at ADP IN _ _ _ _ _ 21 8 8 NUM CD NumType=Card _ _ _ _ 22 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 returned return VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 basal basal ADJ JJ Degree=Pos _ _ _ _ 28 levels level NOUN NNS Number=Plur _ _ _ _ 29 at at ADP IN _ _ _ _ _ 30 24 24 NUM CD NumType=Card _ _ _ _ 31 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 7720 # text = Our data demonstrate that hydrocortisone induces IkappaB and suppresses NF-kappaB expression in MNC in parallel. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 hydrocortisone hydrocortisone PRON NN Number=Sing _ _ _ _ 6 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 suppresses suppress VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 MNC MNC PROPN NNP Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 parallel parallel NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 7721 # text = IkappaB further reduces the translocation of NF-kappaB into the nucleus thus preventing the expression of proinflammatory genes. 1 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 reduces reduce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 translocation translocation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 into into ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 13 thus thus ADV RB _ _ _ _ _ 14 preventing prevent VERB VBG VerbForm=Ger _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 19 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7722 # text = Document 0030011179 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011179 0030011179 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7723 # text = Anaphylatoxins C5a and C3a induce nuclear factor kappaB activation in human peripheral blood monocytes. 1 Anaphylatoxins Anaphylatoxins PROPN NNP Number=Sing _ _ _ _ 2 C5 C5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 C3 C3 VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 induce induce NOUN NN Number=Sing _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 kappaB kappab NOUN NN Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 15 blood blood NOUN NN Number=Sing _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7724 # text = The anaphylatoxins C5a and C3a are involved in the regulation of cytokine production. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 anaphylatoxins anaphylatoxin NOUN NNS Number=Plur _ _ _ _ 3 C5 C5 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 a a NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 C3 C3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 involved involved ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 regulation regulation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 15 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 7725 # text = In this study the capability of C5a and C3a to induce transcription factor activation was examined. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 capability capability NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 C5 C5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 C3a C3a PROPN NNP Number=Sing _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 induce induce VERB VB VerbForm=Inf _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 7726 # text = C5a and C3a stimulation of human peripheral blood monocytes resulted in nuclear expression of a DNA binding activity with specificity to the kappaB sequence. 1 C5 C5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 C3 C3 VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 10 blood blood NOUN NN Number=Sing _ _ _ _ 11 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 12 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 DNA dna NOUN NN Number=Sing _ _ _ _ 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 specificity specificity NOUN NN Number=Sing _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 26 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 7727 # text = The p50 and p65 proteins, constituents of the prototypic nuclear factor kappaB, were identified as components of the DNA-protein complexes by anti-peptide antibodies in gel supershift assays. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 p50 p50 NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 p65 p65 NOUN NN Number=Sing _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 constituents constituent NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 prototypic prototypic ADJ JJ Degree=Pos _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 components component NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 protein protein NOUN NN Number=Sing _ _ _ _ 24 complexes complex NOUN NNS Number=Plur _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 anti-peptide anti-peptide ADJ JJ Degree=Pos _ _ _ _ 27 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 gel gel NOUN NN Number=Sing _ _ _ _ 30 supershift supershift VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 assays assays NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 7728 # text = C5a induced kappaB binding activity was detected 15 min after agonist stimulation, peaked at 30-40 min, and remained detectable at 2 h. 1 C5 C5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 kappaB kappab NOUN NN Number=Sing _ _ _ _ 5 binding binding VERB VBG VerbForm=Ger _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 15 15 NUM CD NumType=Card _ _ _ _ 10 min min NOUN NNS Number=Plur _ _ _ _ 11 after after ADP IN _ _ _ _ _ 12 agonist agonist ADJ JJ Degree=Pos _ _ _ _ 13 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 peaked peake VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 at at ADP IN _ _ _ _ _ 17 30 30 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - SYM SYM _ _ _ _ SpaceAfter=No 19 40 40 NUM CD NumType=Card _ _ _ _ 20 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 25 at at ADP IN _ _ _ _ _ 26 2 2 NUM CD NumType=Card _ _ _ _ 27 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 7729 # text = Binding to kappaB sequence was accompanied by an initial decrease and subsequent increase in the cytoplasmic IkappaBalpha levels, as detected by Western blotting using an anti-IkappaBalpha antibody. 1 Binding bind VERB VBG VerbForm=Ger _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 sequence sequence NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 initial initial ADJ JJ Degree=Pos _ _ _ _ 10 decrease decrease NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 13 increase increase NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 17 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 18 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 as as SCONJ IN _ _ _ _ _ 21 detected detect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 Western western ADJ JJ Degree=Pos _ _ _ _ 24 blotting blotting NOUN NN Number=Sing _ _ _ _ 25 using use VERB VBG VerbForm=Ger _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 anti-IkappaBalpha anti-IkappaBalpha ADJ JJ Degree=Pos _ _ _ _ 28 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 7730 # text = Pertussis toxin treatment markedly decreased kappaB binding activities induced by both C5a and C3a, whereas cholera toxin displayed no inhibitory effect. 1 Pertussis Pertussis DET DT Number=Sing|PronType=Dem _ _ _ _ 2 toxin toxin NOUN NN Number=Sing _ _ _ _ 3 treatment treatment NOUN NN Number=Sing _ _ _ _ 4 markedly markedly ADV RB _ _ _ _ _ 5 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 kappaB kappab NOUN NN Number=Sing _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 activities activity NOUN NNS Number=Plur _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 both both CCONJ CC _ _ _ _ _ 12 C5 C5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 C3a C3a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 whereas whereas SCONJ IN _ _ _ _ _ 18 cholera cholera NOUN NN Number=Sing _ _ _ _ 19 toxin toxin NOUN NN Number=Sing _ _ _ _ 20 displayed display VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 no no DET DT _ _ _ _ _ 22 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 23 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 7731 # text = Neither of the two toxins affected kappaB binding activity induced by TNFalpha in the same cells. 1 Neither neither DET DT _ _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 toxins toxin NOUN NNS Number=Plur _ _ _ _ 6 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 same same ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 7732 # text = These results imply a potential role of the anaphylatoxins C5a and C3a in regulating leukocytes gene expression through G protein-coupled transcription factor activation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 imply imply ADV RB _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 potential potential ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 anaphylatoxins anaphylatoxins PROPN NNPS Number=Plur _ _ _ _ 10 C5 C5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 C3 C3 VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 in in NOUN NN Number=Sing _ _ _ _ 16 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 17 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 18 gene gene ADJ JJ Degree=Pos _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 through through ADP IN _ _ _ _ _ 21 G G PROPN NNP Number=Sing _ _ _ _ 22 protein- protein- PUNCT , _ _ _ _ SpaceAfter=No 23 coupled couple VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7733 # text = Document 0030011186 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011186 0030011186 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7734 # text = Platelet-activating factor stimulates transcription of the heparin-binding epidermal growth factor-like growth factor in monocytes. 1 Platelet Platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 activating activating VERB VBG VerbForm=Ger _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 stimulates stimulate NOUN NNS Number=Plur _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 heparin heparin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 epidermal epidermal ADJ JJ Degree=Pos _ _ _ _ 13 growth growth NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 like like ADJ JJ Degree=Pos _ _ _ _ 17 growth growth NOUN NN Number=Sing _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 7735 # text = Correlation with an increased kappa B binding activity. 1 Correlation correlation NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 binding binde VERB VBG VerbForm=Ger _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7736 # text = Human peripheral blood monocytes responded to stimulation of platelet-activating factor (PAF) with up-regulation of the transcript for heparin-binding epidermal growth factor-like growth factor (HB-EGF), a potent mitogen for vascular smooth muscle cells. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 3 blood blood NOUN NN Number=Sing _ _ _ _ 4 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 5 responded respond VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 activating activating VERB VBG VerbForm=Ger _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 PAF PAF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 up up ADP IN _ _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 regulation regulation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 transcript transcript NOUN NN Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 heparin- heparin- SYM NFP _ _ _ _ SpaceAfter=No 25 binding bind VERB VBG VerbForm=Ger _ _ _ _ 26 epidermal epidermal ADJ JJ Degree=Pos _ _ _ _ 27 growth growth NOUN NN Number=Sing _ _ _ _ 28 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 like like ADJ JJ Degree=Pos _ _ _ _ 31 growth growth NOUN NN Number=Sing _ _ _ _ 32 factor factor NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 HB HB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 EGF EGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 potent potent NOUN NN Number=Sing _ _ _ _ 41 mitogen mitogen NOUN NN Number=Sing _ _ _ _ 42 for for ADP IN _ _ _ _ _ 43 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 44 smooth smooth ADJ JJ Degree=Pos _ _ _ _ 45 muscle muscle NOUN NN Number=Sing _ _ _ _ 46 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 7737 # text = This function of PAF was observed at nanomolar concentrations of the ligand, starting at 30 min after stimulation. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 function function NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 PAF PAF PROPN NNP Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 at at ADP IN _ _ _ _ _ 8 nanomolar nanomolar ADJ JJ Degree=Pos _ _ _ _ 9 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 starting start VERB VBG VerbForm=Ger _ _ _ _ 15 at at ADP IN _ _ _ _ _ 16 30 30 NUM CD NumType=Card _ _ _ _ 17 min min NOUN NNS Number=Plur _ _ _ _ 18 after after ADP IN _ _ _ _ _ 19 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 7738 # text = The PAF-induced up-regulation of HB-EGF mRNA was accompanied by an increase in kappa B binding activity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 PAF Paf NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 regulation regulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 HB HB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 EGF EGF PROPN NNP Number=Sing _ _ _ _ 12 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 accompanied accompany VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 increase increase NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 kappa kappa PROPN NNP Number=Sing _ _ _ _ 20 B b PROPN NNP Number=Sing _ _ _ _ 21 binding binde VERB VBG VerbForm=Ger _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 7739 # text = These functions of PAF appeared to be mediated through the cell surface PAF receptors, as two PAF receptor antagonists, WEB 2086 and L-659,989, blocked both the up-regulation of HB-EGF mRNA and kappa B binding activity induced by PAF. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 functions function NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 PAF PAF PROPN NNP Number=Sing _ _ _ _ 5 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 through through ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 surface surface NOUN NN Number=Sing _ _ _ _ 13 PAF Paf NOUN NN Number=Sing _ _ _ _ 14 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 as as SCONJ IN _ _ _ _ _ 17 two two NUM CD NumType=Card _ _ _ _ 18 PAF Paf NOUN NN Number=Sing _ _ _ _ 19 receptor receptor NOUN NN Number=Sing _ _ _ _ 20 antagonists antagonist NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 WEB Web PROPN NNP Number=Sing _ _ _ _ 23 2086 2086 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 L-659,989 L-659,989 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 both both CCONJ CC _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 regulation regulation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 HB HB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 EGF EGF PROPN NNP Number=Sing _ _ _ _ 37 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 kappa kappa PROPN NNP Number=Sing _ _ _ _ 40 B b PROPN NNP Number=Sing _ _ _ _ 41 binding binde VERB VBG VerbForm=Ger _ _ _ _ 42 activity activity NOUN NN Number=Sing _ _ _ _ 43 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 by by ADP IN _ _ _ _ _ 45 PAF PAF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 7740 # text = The antagonists, however, had no effect on phorbol ester-induced up-regulation of HB-EGF mRNA and kappa B binding activity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 antagonists antagonist NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 however however ADV RB _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 no no DET DT _ _ _ _ _ 8 effect effect NOUN NN Number=Sing _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 11 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 regulation regulation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 HB HB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 EGF EGF PROPN NNP Number=Sing _ _ _ _ 21 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 kappa kappa PROPN NNP Number=Sing _ _ _ _ 24 B b PROPN NNP Number=Sing _ _ _ _ 25 binding binde VERB VBG VerbForm=Ger _ _ _ _ 26 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 7741 # text = Pretreatment of monocytes with pertussis toxin inhibited these functions of PAF, whereas cholera toxin had no inhibitory effect. 1 Pretreatment Pretreatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 pertussis pertussis DET DT Number=Sing|PronType=Dem _ _ _ _ 6 toxin toxin NOUN NN Number=Sing _ _ _ _ 7 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 9 functions function NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 PAF PAF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 whereas whereas SCONJ IN _ _ _ _ _ 14 cholera cholera NOUN NN Number=Sing _ _ _ _ 15 toxin toxin NOUN NN Number=Sing _ _ _ _ 16 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 no no DET DT _ _ _ _ _ 18 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 19 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 7742 # text = Pyrrolidine dithiocarbamate, an inhibitor for NF-kappa B activation, markedly reduced PAF-stimulated kappa B binding activity as well as up-regulation of HB-EGF mRNA. 1 Pyrrolidine Pyrrolidine NOUN NN Number=Sing _ _ _ _ 2 dithiocarbamate dithiocarbamate NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 markedly markedly ADV RB _ _ _ _ _ 14 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 PAF Paf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ _ 20 binding binde VERB VBG VerbForm=Ger _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 as as ADV RB _ _ _ _ _ 23 well well ADV RB Degree=Pos _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 up up ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 regulation regulation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 HB HB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 EGF EGF PROPN NNP Number=Sing _ _ _ _ 32 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 7743 # text = These results suggest a potential role of PAF in HB-EGF expression and provide evidence that this stimulation may occur through increased kappa B binding activity. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 potential potential ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 PAF PAF PROPN NNP Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 HB HB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 EGF EGF PROPN NNP Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 provide provide VERB VB VerbForm=Inf _ _ _ _ 16 evidence evidence NOUN NN Number=Sing _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 19 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 20 may may AUX MD VerbForm=Fin _ _ _ _ 21 occur occur VERB VB VerbForm=Inf _ _ _ _ 22 through through ADP IN _ _ _ _ _ 23 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ _ 26 binding binde VERB VBG VerbForm=Ger _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7744 # text = Document 0030011190 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011190 0030011190 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7745 # text = Transcriptional down-regulation of c-myc expression by protein synthesis-dependent and -independent pathways in a human T lymphoblastic tumor cell line. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 down down NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 c- c- SYM NFP _ _ _ _ SpaceAfter=No 7 myc myc ADJ JJ Degree=Pos _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 independent independent ADJ JJ Degree=Pos _ _ _ _ 17 pathways pathway NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 T T PROPN NNP Number=Sing _ _ _ _ 22 lymphoblastic lymphoblastic ADJ JJ Degree=Pos _ _ _ _ 23 tumor tumor NOUN NN Number=Sing _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7746 # text = We show that in the human T lymphoblastic tumor cell line Molt4 c-myc mRNA and protein expression is down-regulated after exposure to dimethyl sulfoxide, to phorbol myristate acetate, or to the calcium ionophore A23187, which raises the intracellular calcium concentration. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 lymphoblastic lymphoblastic ADJ JJ Degree=Pos _ _ _ _ 9 tumor tumor NOUN NN Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 line line NOUN NN Number=Sing _ _ _ _ 12 Molt4 molt4 NOUN NN Number=Sing _ _ _ _ 13 c- c- SYM SYM _ _ _ _ SpaceAfter=No 14 myc myc NOUN NN Number=Sing _ _ _ _ 15 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 down down ADV RB _ _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 after after ADP IN _ _ _ _ _ 24 exposure exposure NOUN NN Number=Sing _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 dimethyl dimethyl VERB VB VerbForm=Inf _ _ _ _ 27 sulfoxide sulfoxide NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 to to PART TO _ _ _ _ _ 30 phorbol phorbol VERB VB VerbForm=Inf _ _ _ _ 31 myristate myristate NOUN NN Number=Sing _ _ _ _ 32 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 or or CCONJ CC _ _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 calcium calcium NOUN NN Number=Sing _ _ _ _ 38 ionophore ionophore NOUN NN Number=Sing _ _ _ _ 39 A23187 A23187 NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 which which PRON WDT PronType=Rel _ _ _ _ 42 raises raise VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 45 calcium calcium NOUN NN Number=Sing _ _ _ _ 46 concentration concentration NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 7747 # text = A block to RNA elongation is largely responsible for decreased c-myc transcription. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 block block NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 RNA RNA PROPN NNP Number=Sing _ _ _ _ 5 elongation elongation NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 largely largely ADV RB _ _ _ _ _ 8 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 c- c- SYM SYM _ _ _ _ SpaceAfter=No 12 myc myc ADJ JJ Degree=Pos _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 7748 # text = Although negative regulation by dimethyl sulfoxide takes place even when protein synthesis is inhibited by cycloheximide, the phorbol myristate acetate effect is blocked to some extent only by cycloheximide. 1 Although although SCONJ IN _ _ _ _ _ 2 negative negative ADJ JJ Degree=Pos _ _ _ _ 3 regulation regulation NOUN NN Number=Sing _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 dimethyl dimethyl ADJ JJ Degree=Pos _ _ _ _ 6 sulfoxide sulfoxide NOUN NN Number=Sing _ _ _ _ 7 takes take VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 place place NOUN NN Number=Sing _ _ _ _ 9 even even ADV RB _ _ _ _ _ 10 when when ADV WRB PronType=Int _ _ _ _ 11 protein protein ADV WRB PronType=Rel _ _ _ _ 12 synthesis synthesis PRON DT Number=Sing|PronType=Dem _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 20 myristate myristate NOUN NN Number=Sing _ _ _ _ 21 acetate acetate NOUN NN Number=Sing _ _ _ _ 22 effect effect NOUN NN Number=Sing _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 some some DET DT _ _ _ _ _ 27 extent extent NOUN NN Number=Sing _ _ _ _ 28 only only ADV RB _ _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 7749 # text = The calcium ionophore-induced c-myc suppression, however, strictly requires de novo protein synthesis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 calcium calcium NOUN NN Number=Sing _ _ _ _ 3 ionophore ionophore NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 c- c- SYM NFP _ _ _ _ SpaceAfter=No 7 myc myc NOUN NN Number=Sing _ _ _ _ 8 suppression suppression NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 however however ADV RB _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 strictly strictly ADV RB _ _ _ _ _ 13 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 de de X FW Foreign=Yes _ _ _ _ 15 novo novo ADJ JJ Degree=Pos _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 synthesis synthesis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 7750 # text = Therefore, two different negative regulatory pathways are involved in c-myc regulation: one which is independent and one which depends on de novo protein synthesis. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 two two NUM CD NumType=Card _ _ _ _ 4 different different ADJ JJ Degree=Pos _ _ _ _ 5 negative negative ADJ JJ Degree=Pos _ _ _ _ 6 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 7 pathways pathway NOUN NNS Number=Plur _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 involved involved ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 c- c- SYM NFP _ _ _ _ SpaceAfter=No 12 myc myc NOUN NN Number=Sing _ _ _ _ 13 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 : : PUNCT : _ _ _ _ _ 15 one one NUM CD NumType=Card _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 independent independent ADJ JJ Degree=Pos _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 one one NUM CD NumType=Card _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 depends depend VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 on on ADP IN _ _ _ _ _ 24 de de X FW Foreign=Yes _ _ _ _ 25 novo novo ADJ JJ Degree=Pos _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ _ 27 synthesis synthesis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 7751 # text = The latter one appears to be mediated by a rapidly calcium-dependent induced gene product. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 latter latter ADJ JJ Degree=Pos _ _ _ _ 3 one one NOUN NN Number=Sing _ _ _ _ 4 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 rapidly rapidly ADV RB _ _ _ _ _ 11 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 -dependent -dependent ADJ JJ Degree=Pos _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 product product NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7752 # text = Document 0030011192 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011192 0030011192 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7753 # text = Expression of the Runt domain-encoding PEBP2 alpha genes in T cells during thymic development. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 Runt Runt PROPN NNP Number=Sing _ _ _ _ 5 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 encoding encoding VERB VBG VerbForm=Ger _ _ _ _ 8 PEBP2 Pebp2 NOUN NN Number=Sing _ _ _ _ 9 alpha alpha ADP IN _ _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 during during ADP IN _ _ _ _ _ 15 thymic thymic ADJ JJ Degree=Pos _ _ _ _ 16 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7754 # text = The PEBP2 alpha 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 PEBP2 Pebp2 NOUN NN Number=Sing _ _ _ _ 3 alpha alpha NOUN NN Number=Sing _ _ _ _ # sent_id = 7755 # text = A and PEBP2 alpha B genes encode the DNA-binding subunit of a murine transcription factor, PEBP2, which is implicated as a T-cell-specific transcriptional regulator. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 PEBP2 PEBP2 NUM CD NumType=Card _ _ _ _ 4 alpha alpha NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 genes gene NOUN NNS Number=Plur _ _ _ _ 7 encode encode VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 subunit subunit NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 murine murine NOUN NN Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 PEBP2 Pebp2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 specific specific ADJ JJ Degree=Pos _ _ _ _ 30 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 31 regulator regulator NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 7756 # text = These two related genes share the evolutionarily conserved region encoding the Runt domain. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 related related ADJ JJ Degree=Pos _ _ _ _ 4 genes gene NOUN NNS Number=Plur _ _ _ _ 5 share share VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 evolutionarily evolutionarily ADV RB _ _ _ _ _ 8 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 region region NOUN NN Number=Sing _ _ _ _ 10 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 Runt Runt PROPN NNP Number=Sing _ _ _ _ 13 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 7757 # text = PEBP2 alpha 1 PEBP2 PEBP2 NUM CD NumType=Card _ _ _ _ 2 alpha alpha NOUN NN Number=Sing _ _ _ _ # sent_id = 7758 # text = B is the murine counterpart of human AML1, which is located at the breakpoints of the 8;21 and 3;21 chromosome translocations associated with acute myeloid leukemia. 1 B b NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 murine murine NOUN NN Number=Sing _ _ _ _ 5 counterpart counterpart NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 AML1 Aml1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 which which PRON WDT PronType=Rel _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 at at ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 breakpoints breakpoint NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 8;21 8;21 NUM CD NumType=Card _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ; ; PUNCT , _ _ _ _ SpaceAfter=No 22 21 21 NUM CD NumType=Card _ _ _ _ 23 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 24 translocations translocation NOUN NNS Number=Plur _ _ _ _ 25 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 acute acute NOUN NN Number=Sing _ _ _ _ 28 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 29 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 7759 # text = Northern (RNA) blots of various adult mouse tissues revealed that the levels of expression of both genes were most prominent in the thymus. 1 Northern Northern PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 RNA RNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 blots blot NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 various various ADJ JJ Degree=Pos _ _ _ _ 8 adult adult NOUN NN Number=Sing _ _ _ _ 9 mouse mouse NOUN NN Number=Sing _ _ _ _ 10 tissues tissue NOUN NNS Number=Plur _ _ _ _ 11 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 levels level NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 both both DET DT _ _ _ _ _ 19 genes gene NOUN NNS Number=Plur _ _ _ _ 20 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 most most ADV RBS _ _ _ _ _ 22 prominent prominent ADJ JJ Degree=Pos _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 thymus thymus NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 7760 # text = Furthermore, transcripts of PEBP2 alpha 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 PEBP2 PEBP2 NUM CD NumType=Card _ _ _ _ 6 alpha alpha NOUN NN Number=Sing _ _ _ _ # sent_id = 7761 # text = A and mouse AML1/PEBP2 alpha 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 mouse mouse NOUN NN Number=Sing _ _ _ _ 4 AML1 Aml1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 PEBP2 PEBP2 NUM CD NumType=Card _ _ _ _ 7 alpha alpha NOUN NN Number=Sing _ _ _ _ # sent_id = 7762 # text = B were detected in T lymphocytes in the thymuses from day 16 embryos and newborns, as well as 4-week-old adult mice, by in situ hybridization. 1 B benefit NOUN NN Number=Sing _ _ _ _ 2 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 thymuses thymuse NOUN NNS Number=Plur _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 day day NOUN NN Number=Sing _ _ _ _ 12 16 16 NUM CD NumType=Card _ _ _ _ 13 embryos embryo NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 newborns newborn NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 as as ADV RB _ _ _ _ _ 18 well well ADV RB Degree=Pos _ _ _ _ 19 as as ADP IN _ _ _ _ _ 20 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 week week NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 old old ADJ JJ Degree=Pos _ _ _ _ 25 adult adult NOUN NN Number=Sing _ _ _ _ 26 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 situ situ NOUN NN Number=Sing _ _ _ _ 31 hybridization hybridization NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 7763 # text = The expression of the genes persisted in peripheral lymph nodes of adult mice. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 genes gene NOUN NNS Number=Plur _ _ _ _ 6 persisted persist VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 9 lymph lymph NOUN NN Number=Sing _ _ _ _ 10 nodes node NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 adult adult NOUN NN Number=Sing _ _ _ _ 13 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 7764 # text = The transcripts were detected in all the CD4- CD8-, CD4+ CD8+, CD4+ CD8-, and CD4- CD8+ cell populations. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 all all DET PDT _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 CD4 Cd4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ _ 10 CD8-, Cd8-, NOUN NN Number=Sing _ _ _ _ 11 CD4+ Cd4+ NOUN NN Number=Sing _ _ _ _ 12 CD8+ Cd8+ NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 CD4+ CD4+ CCONJ CC _ _ _ _ _ 15 CD8 CD8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 -, -, PUNCT . _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - SYM SYM _ _ _ _ _ 20 CD8 CD8 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 + + SYM SYM _ _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 populations population NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 7765 # text = The results indicated that both genes are expressed in T cells throughout their development, supporting the notion that PEBP2 is a T-cell-specific transcription factor. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 both both DET DT _ _ _ _ _ 6 genes gene NOUN NNS Number=Plur _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 throughout throughout ADP IN _ _ _ _ _ 13 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 supporting support VERB VBG VerbForm=Ger _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 notion notion NOUN NN Number=Sing _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 PEBP2 Pebp2 NOUN NN Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 specific specific ADJ JJ Degree=Pos _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 7766 # text = Transcripts of mouse AML1/PEBP2 alpha B were also detected in day 12 fetal hematopoietic liver and in the bone marrow cells of newborn mice. 1 Transcripts transcript NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 mouse mouse NOUN NN Number=Sing _ _ _ _ 4 AML1 AML1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 PEBP2 PEBP2 NUM CD NumType=Card _ _ _ _ 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 also also ADV RB _ _ _ _ _ 11 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 day day NOUN NN Number=Sing _ _ _ _ 14 12 12 NUM CD NumType=Card _ _ _ _ 15 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 16 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 17 liver liver NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 bone bone NOUN NN Number=Sing _ _ _ _ 22 marrow marrow NOUN NN Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 newborn newborn ADJ JJ Degree=Pos _ _ _ _ 26 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 7767 # text = The implication of mouse AML1/PEBP2 alpha B expression in hematopoietic cells other than those of T-cell lineage is discussed in relation to myeloid leukemogenesis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 implication implication NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 mouse mouse NOUN NN Number=Sing _ _ _ _ 5 AML1 AML1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 / / PUNCT , _ _ _ _ SpaceAfter=No 7 PEBP2 PEBP2 NUM CD NumType=Card _ _ _ _ 8 alpha alpha NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 other other ADJ JJ Degree=Pos _ _ _ _ 15 than than ADP IN _ _ _ _ _ 16 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 lineage lineage NOUN NN Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 discussed discuss VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 relation relation NOUN NN Number=Sing _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 myeloid myeloid VERB VB VerbForm=Inf _ _ _ _ 27 leukemogenesis leukemogenesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7768 # text = Document 0030011198 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011198 0030011198 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7769 # text = Regulation of granulocyte-macrophage colony-stimulating factor and E-selectin expression in endothelial cells by cyclosporin A and the T-cell transcription factor NFAT. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 6 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 stimulating stimulate VERB VBG VerbForm=Ger _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 E- E- X GW _ _ _ _ SpaceAfter=No 12 selectin selectin ADJ JJ Degree=Pos _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 19 A a NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7770 # text = Nuclear factor of activated T cells (NFAT) was originally described as a T-cell-specific transcription factor athat supported the activation of cytokine gene expression and mediated the immunoregulatory effects of cyclosporin A (CsA). 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 T T PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 originally originally ADV RB _ _ _ _ _ 12 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 specific specific ADJ JJ Degree=Pos _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 athat athat PRON WDT PronType=Rel _ _ _ _ 22 supported support VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 mediated mediate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 immunoregulatory immunoregulatory ADJ JJ Degree=Pos _ _ _ _ 33 effects effect NOUN NNS Number=Plur _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 36 A A PROPN NNP Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 7771 # text = As we observed that activated endothelial cells also expressed NFAT, we tested the antiinflammatory properties of CsA in endothelial cells. 1 As as SCONJ IN _ _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that PRON WDT PronType=Dem _ _ _ _ 5 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 also also ADV RB _ _ _ _ _ 9 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 13 tested test VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 antiinflammatory antiinflammatory ADJ JJ Degree=Pos _ _ _ _ 16 properties property NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 CsA csa PROPN NNP Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 7772 # text = Significantly, CsA completely suppressed the induction of NFAT in endothelial cells and inhibited the activity of granulocyte-macrophage colony-stimulating factor (GM-CSF) gene regulatory elements that use NFAT by 60%. 1 Significantly significantly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 CsA csa PROPN NNP Number=Sing _ _ _ _ 4 completely completely ADV RB _ _ _ _ _ 5 suppressed suppress VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 induction induction NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 21 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 gene gene PRON NN Number=Sing _ _ _ _ 31 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 32 elements element NOUN NNS Number=Plur _ _ _ _ 33 that that PRON WDT PronType=Rel _ _ _ _ 34 use use VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 NFAT NFAT ADV RB _ _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 60% 60% SYM NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 7773 # text = CsA similarly mediated a reduction of up to 65% in GM-CSF mRNA and protein expression in activated endothelial cells. 1 CsA csa PROPN NNP Number=Sing _ _ _ _ 2 similarly similarly ADV RB _ _ _ _ _ 3 mediated mediate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 reduction reduction NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 up up NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 65 65 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 % % SYM NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 CSF CSF PROPN NNP Number=Sing _ _ _ _ 15 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 7774 # text = CsA also suppressed E-selectin, but not vascular cell adhesion molecule-1 (VCAM-1) expression in endothelial cells, even though the E-selectin promoter is activated by NF-kappa B rather than NFAT. 1 CsA csa PROPN NNP Number=Sing _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 E- E- NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 selectin selectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 but but CCONJ CC _ _ _ _ _ 8 not not ADV RB _ _ _ _ _ 9 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 12 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 even even ADV RB _ _ _ _ _ 26 though though SCONJ IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 selectin selectin NOUN NN Number=Sing _ _ _ _ 30 promoter promoter NOUN NN Number=Sing _ _ _ _ 31 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 kappa kappa NOUN NN Number=Sing _ _ _ _ 37 B b NOUN NN Number=Sing _ _ _ _ 38 rather rather ADV RB _ _ _ _ _ 39 than than ADP IN _ _ _ _ _ 40 NFAT NFAT PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 7775 # text = Hence, induction of cell surface expression of this leukocyte adhesion molecule by tumor necrosis factor (TNF)-alpha was reduced by 40% in the presence of CsA, and this was reflected by a 29% decrease in neutrophil adhesion. 1 Hence hence ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 induction induction NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 surface surface NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 10 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 11 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 12 molecule molecule NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 tumor tumor NOUN NN Number=Sing _ _ _ _ 15 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 - - PUNCT : _ _ _ _ SpaceAfter=No 21 alpha alpha NOUN NN Number=Sing _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 % % SYM NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 presence presence NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 35 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 36 reflected reflect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 by by ADP IN _ _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 29 29 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 % % SYM NN Number=Sing _ _ _ _ 41 decrease decrease NOUN NN Number=Sing _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 neutrophil neutrophil ADJ JJ Degree=Pos _ _ _ _ 44 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 7776 # text = The effects of CsA on endothelial cells were also detected at the chromatin structure level, as DNasel hypersensitive sites within both the GM-CSF enhancer and the E-selectin promoter were suppressed by CsA. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 CsA csa NOUN NN Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 also also ADV RB _ _ _ _ _ 10 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 at at ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 14 structure structure NOUN NN Number=Sing _ _ _ _ 15 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 as as SCONJ IN _ _ _ _ _ 18 DNasel DNasel PROPN NNP Number=Sing _ _ _ _ 19 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 20 sites site NOUN NNS Number=Plur _ _ _ _ 21 within within ADP IN _ _ _ _ _ 22 both both CCONJ CC _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 CSF CSF PROPN NNP Number=Sing _ _ _ _ 27 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 selectin selectin NOUN NN Number=Sing _ _ _ _ 32 promoter promoter NOUN NN Number=Sing _ _ _ _ 33 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 7777 # text = This represents the first report of NFAT in endothelial cells and suggests mechanisms by which CsA could function as an antiinflammatory agent. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 represents represent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 5 report report NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NFAT Nfat PRON DT Number=Sing|PronType=Dem _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 CsA csa PROPN NNP Number=Sing _ _ _ _ 17 could could AUX MD VerbForm=Fin _ _ _ _ 18 function function VERB VB VerbForm=Inf _ _ _ _ 19 as as ADP IN _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 antiinflammatory antiinflammatory ADJ JJ Degree=Pos _ _ _ _ 22 agent agent NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7778 # text = Document 0030011203 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011203 0030011203 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7779 # text = Cross-linking of CD44 on rheumatoid synovial cells up-regulates VCAM-1. CD44 is a ubiquitous molecule also known as hyaluronic acid or homing receptor. 1 Cross cross ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 linking linking NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 CD44 CD44 NOUN NN Number=Sing _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 rheumatoid rheumatoid ADJ JJ Degree=Pos _ _ _ _ 8 synovial synovial ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 up up X GW _ _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n 17 CD44 Cd44 NOUN NN Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 21 molecule molecule NOUN NN Number=Sing _ _ _ _ 22 also also ADV RB _ _ _ _ _ 23 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 hyaluronic hyaluronic ADJ JJ Degree=Pos _ _ _ _ 26 acid acid NOUN NN Number=Sing _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 homing home VERB VBG VerbForm=Ger _ _ _ _ 29 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 7780 # text = However, the cellular functions and its role in inflammation, for example, rheumatoid synovitis, are currently unknown. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 5 functions function NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 8 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 role role NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 example example NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 rheumatoid rheumatoid ADJ JJ Degree=Pos _ _ _ _ 17 synovitis synovitis NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 currently currently ADV RB _ _ _ _ _ 21 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 7781 # text = In this study, we propose a novel function for CD44. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 novel novel NOUN NN Number=Sing _ _ _ _ 9 function function NOUN NN Number=Sing _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 CD44 CD44 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 7782 # text = Using synovial cells from rheumatoid arthritis (RA) patients, we demonstrated that CD44 cross-linking and binding to hyaluronan augmented VCAM-1 expression and subsequently VCAM-1-mediated cell adhesion. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 synovial synovial ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 rheumatoid rheumatoid NOUN NN Number=Sing _ _ _ _ 6 arthritis arthritis NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 13 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 CD44 Cd44 PROPN NNP Number=Sing _ _ _ _ 16 cross cross PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 hyaluronan hyaluronan VERB VB VerbForm=Inf _ _ _ _ 22 augmented augment VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 subsequently subsequently ADV RB _ _ _ _ _ 29 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 7783 # text = Briefly, we found that 1) rheumatoid synovial cells highly expressed CD44; 2) cross-linking of CD44 markedly but transiently augmented VCAM-1 expression and its mRNA transcription much more than did IL-1beta and TNF-alpha; 3) hyaluronan, especially when fragmented, also up-regulated VCAM-1; 4) CD44 activated the transcription factor AP-1; and 5) the integrin-dependent adhesive function of RA synovial cells to T cells was also amplified by CD44 cross-linking. 1 Briefly briefly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 1 1 X LS _ _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 rheumatoid rheumatoid ADJ JJ Degree=Pos _ _ _ _ 9 synovial synovial ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 highly highly ADV RB _ _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 CD44 Cd44 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ; ; PUNCT , _ _ _ _ _ 15 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 -linking -linking NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 CD44 CD44 PROPN NNP Number=Sing _ _ _ _ 21 markedly markedly ADV RB _ _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 transiently transiently ADV RB _ _ _ _ _ 24 augmented augment VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 31 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 much much ADV RB _ _ _ _ _ 35 more more ADJ JJR Degree=Cmp _ _ _ _ 36 than than SCONJ IN _ _ _ _ _ 37 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 38 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 beta beta NOUN NN Number=Sing _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 ; ; PUNCT , _ _ _ _ _ 47 3 3 X LS _ _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ _ 49 hyaluronan hyaluronan ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 50 , , PUNCT , _ _ _ _ _ 51 especially especially ADV RB _ _ _ _ _ 52 when when ADV WRB PronType=Int _ _ _ _ 53 fragmented fragment ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 54 , , PUNCT , _ _ _ _ _ 55 also also ADV RB _ _ _ _ _ 56 up up ADV RB _ _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 59 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 61 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 62 ; ; PUNCT , _ _ _ _ _ 63 4 4 X LS _ _ _ _ SpaceAfter=No 64 ) ) PUNCT -RRB- _ _ _ _ _ 65 CD44 CD44 PROPN NNP Number=Sing _ _ _ _ 66 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 67 the the DET DT Definite=Def|PronType=Art _ _ _ _ 68 transcription transcription NOUN NN Number=Sing _ _ _ _ 69 factor factor NOUN NN Number=Sing _ _ _ _ 70 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 71 - - PUNCT , _ _ _ _ SpaceAfter=No 72 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 73 ; ; PUNCT , _ _ _ _ _ 74 and and CCONJ CC _ _ _ _ _ 75 5 5 X LS _ _ _ _ SpaceAfter=No 76 ) ) PUNCT -RRB- _ _ _ _ _ 77 the the DET DT Definite=Def|PronType=Art _ _ _ _ 78 integrin integrin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 79 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 80 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 81 adhesive adhesive ADJ JJ Degree=Pos _ _ _ _ 82 function function NOUN NN Number=Sing _ _ _ _ 83 of of ADP IN _ _ _ _ _ 84 RA RA PROPN NNP Number=Sing _ _ _ _ 85 synovial synovial ADJ JJ Degree=Pos _ _ _ _ 86 cells cell NOUN NNS Number=Plur _ _ _ _ 87 to to ADP IN _ _ _ _ _ 88 T t PROPN NNP Number=Sing _ _ _ _ 89 cells cell NOUN NNS Number=Plur _ _ _ _ 90 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 91 also also ADV RB _ _ _ _ _ 92 amplified amplify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 93 by by ADP IN _ _ _ _ _ 94 CD44 CD44 NUM CD NumType=Card _ _ _ _ 95 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 96 -linking -linking NOUN NN Number=Sing _ _ _ SpaceAfter=No 97 . . PUNCT . _ _ _ _ _ # sent_id = 7784 # text = These results indicate that the adhesion of RA synovial cells to matrices such as hyaluronic acid through CD44 could up-regulate VCAM-1 expression and VCAM-1-mediated adhesion to T cells, which might in turn cause activation of T cells and synovial cells in RA synovitis. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 RA RA PROPN NNP Number=Sing _ _ _ _ 9 synovial synovial ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 matrices matrice NOUN NNS Number=Plur _ _ _ _ 13 such such ADJ JJ Degree=Pos _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 hyaluronic hyaluronic ADJ JJ Degree=Pos _ _ _ _ 16 acid acid NOUN NN Number=Sing _ _ _ _ 17 through through ADP IN _ _ _ _ _ 18 CD44 CD44 PROPN NNP Number=Sing _ _ _ _ 19 could could AUX MD VerbForm=Fin _ _ _ _ 20 up up ADV RB _ _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 regulate regulate ADJ JJ Degree=Pos _ _ _ _ 23 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 mediated mediated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 34 to to ADP IN _ _ _ _ _ 35 T t PROPN NNP Number=Sing _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 which which PRON WDT PronType=Rel _ _ _ _ 39 might might AUX MD VerbForm=Fin _ _ _ _ 40 in in ADV RB _ _ _ _ _ 41 turn turn VERB VB VerbForm=Inf _ _ _ _ 42 cause cause NOUN NN Number=Sing _ _ _ _ 43 activation activation NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 T t PROPN NNP Number=Sing _ _ _ _ 46 cells cell NOUN NNS Number=Plur _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 synovial synovial ADJ JJ Degree=Pos _ _ _ _ 49 cells cell NOUN NNS Number=Plur _ _ _ _ 50 in in ADP IN _ _ _ _ _ 51 RA RA PROPN NNP Number=Sing _ _ _ _ 52 synovitis synovitis PROPN NNP Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 7785 # text = We therefore propose that such cross-talking among distinct adhesion molecules may be involved in the pathogenesis of inflammation, including RA synovitis. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 therefore therefore ADV RB _ _ _ _ _ 3 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 such such ADJ JJ Degree=Pos _ _ _ _ 6 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 -talking -talk VERB VBG VerbForm=Ger _ _ _ _ 8 among among ADP IN _ _ _ _ _ 9 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 10 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 11 molecules molecule NOUN NNS Number=Plur _ _ _ _ 12 may may AUX MD VerbForm=Fin _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 involved involved ADJ JJ Degree=Pos _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 including include VERB VBG VerbForm=Ger _ _ _ _ 22 RA RA ADJ JJ Degree=Pos _ _ _ _ 23 synovitis synovitis NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7786 # text = Document 0030011207 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011207 0030011207 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7787 # text = Suppression of a cellular differentiation program by phorbol esters coincides with inhibition of binding of a cell-specific transcription factor (NF-E2) to an enhancer element required for expression of an erythroid-specific gene. 1 Suppression Suppression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 5 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 6 program program NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 9 esters ester NOUN NNS Number=Plur _ _ _ _ 10 coincides coincide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 13 of of SCONJ IN _ _ _ _ _ 14 binding binding VERB VBG VerbForm=Ger _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 E2 e2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 30 element element NOUN NN Number=Sing _ _ _ _ 31 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 expression expression NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 specific specific ADJ JJ Degree=Pos _ _ _ _ 39 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7788 # text = Induction by hemin increases, while induction with 12-O-tetradecanoylphorbol-13-acetate (TPA) represses, erythroid-specific gene expression in the human cell line K562. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 by by ADP IN _ _ _ _ _ 3 hemin hemin NOUN NN Number=Sing _ _ _ _ 4 increases increase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 while while SCONJ IN _ _ _ _ _ 7 induction induction NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 12-O- 12-o- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 tetradecanoylphorbol tetradecanoylphorbol NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 -acetate -acetate NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 TPA TPA NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 represses represse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 specific specific ADJ JJ Degree=Pos _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 line line NOUN NN Number=Sing _ _ _ _ 28 K562 k562 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 7789 # text = We analyzed the effects of hemin or TPA induction on the binding and activity of transcription factors at a regulatory element found within the transcriptional regulatory sequences of many erythroid-specific genes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effects effect NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 hemin hemin NOUN NN Number=Sing _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 TPA TPa DET DT Definite=Ind|PronType=Art _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 binding binding NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factors factor NOUN NNS Number=Plur _ _ _ _ 18 at at ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 21 element element NOUN NN Number=Sing _ _ _ _ 22 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 within within ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 26 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 27 sequences sequence NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 many many ADJ JJ Degree=Pos _ _ _ _ 30 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 specific specific ADJ JJ Degree=Pos _ _ _ _ 33 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 7790 # text = TPA induction increases the binding of ubiquitous AP-1 factors to this element. 1 TPA TPa DET DT Definite=Ind|PronType=Art _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 binding binding NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 8 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 14 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 7791 # text = TPA induction inhibits the binding of the lineage limited transcription factor NF-E2 to this transcriptional control element. 1 TPA TPa DET DT Definite=Ind|PronType=Art _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 binding binding NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 lineage lineage NOUN NN Number=Sing _ _ _ _ 9 limited limited ADJ JJ Degree=Pos _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 E2 e2 NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 control control NOUN NN Number=Sing _ _ _ _ 19 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 7792 # text = Hemin induction of K562 cells does not facilitate the binding of NF-E2 to its recognition site. 1 Hemin Hemin ADJ JJ Degree=Pos _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 K562 K562 NUM CD NumType=Card _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 facilitate facilitate VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 binding binding NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 E2 e2 NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 17 recognition recognition NOUN NN Number=Sing _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 7793 # text = Hemin induction appears to nonspecifically increase the expression of transiently transfected genes in K562 cells. 1 Hemin Hemin ADJ JJ Degree=Pos _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 nonspecifically nonspecifically ADV RB _ _ _ _ _ 6 increase increase VERB VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 transiently transiently ADV RB _ _ _ _ _ 11 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 genes gene NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 K562 K562 NUM CD NumType=Card _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 7794 # text = Beyond this nonspecific increase in gene expression, hemin induction acts to increase the activity of the lineage limited transcription factor NF-E2. 1 Beyond beyond ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 nonspecific nonspecific ADJ JJ Degree=Pos _ _ _ _ 4 increase increase NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 gene gene ADJ JJ Degree=Pos _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 hemin hemin NOUN NN Number=Sing _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ _ 11 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 increase increase VERB VB VerbForm=Inf _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 lineage lineage NOUN NN Number=Sing _ _ _ _ 19 limited limited ADJ JJ Degree=Pos _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 E2 e2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 7795 # text = The divergent effects of hemin and TPA on gene expression in K562 cells are mediated, in part, by their contrasting effects on the transcription factor NF-E2. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 divergent divergent ADJ JJ Degree=Pos _ _ _ _ 3 effects effect NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 hemin hemin NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 TPA TPa NOUN NN Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 K562 K562 NUM CD NumType=Card _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 part part ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 22 contrasting contrast NOUN NN Number=Sing _ _ _ _ 23 effects effect NOUN NNS Number=Plur _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ _ 28 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 E2 e2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7796 # text = Document 0030011213 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011213 0030011213 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7797 # text = Identification of a human LIM-Hox gene, hLH-2, aberrantly expressed in chronic myelogenous leukaemia and located on 9q33-34.1. 1 Identification identification NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 LIM LIm NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 Hox Hox NOUN NN Number=Sing _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 hLH hLh NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 aberrantly aberrantly ADV RB _ _ _ _ _ 15 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 18 myelogenous myelogenous ADJ JJ Degree=Pos _ _ _ _ 19 leukaemia leukaemia NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 on on ADP IN _ _ _ _ _ 23 9q33 9q33 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - SYM SYM _ _ _ _ SpaceAfter=No 25 34.1 34.1 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7798 # text = We describe the isolation of human LH-2, a putative transcription factor containing two cysteine-rich regions (LIM domains) and a homeobox 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 describe describe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 isolation isolation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 LH Lh NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 putative putative ADJ JJ Degree=Pos _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 containing contain VERB VBG VerbForm=Ger _ _ _ _ 16 two two NUM CD NumType=Card _ _ _ _ 17 cysteine cysteine NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 rich rich ADJ JJ Degree=Pos _ _ _ _ 20 regions region NOUN NNS Number=Plur _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 LIM Lim NOUN NN Number=Sing _ _ _ _ 23 domains domain NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 homeobox homeobox NOUN NN Number=Sing _ _ _ _ # sent_id = 7799 # text = (Hox) DNA-binding domain. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 Hox Hox NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 binding binding VERB VBG VerbForm=Ger _ _ _ _ 7 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 7800 # text = High levels of hLH-2 expression were observed in all cases of chronic myelogenous leukaemia (CML) tested, regardless of disease status. 1 High high ADJ JJ Degree=Pos _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 hLH hLH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 all all DET DT _ _ _ _ _ 12 cases case NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 15 myelogenous myelogenous ADJ JJ Degree=Pos _ _ _ _ 16 leukaemia leukaemia NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 CML CML NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 tested tested VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 regardless regardless ADV RB _ _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 disease disease NOUN NN Number=Sing _ _ _ _ 25 status status NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 7801 # text = hLH-2 was mapped to chromosome 9Q33-34.1, in the same region as the reciprocal translocation that creates the BCR-ABL chimera of the Philadelphia chromosome (Ph'), the hallmark of CML; hLH-2 was retained on the derivative 9 chromosome and is therefore centromeric of c-ABL. 1 hLH hLh INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 mapped map VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 chromosome chromosome VERB VB VerbForm=Inf _ _ _ _ 8 9Q33 9Q33 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - SYM SYM _ _ _ _ SpaceAfter=No 10 34.1 34.1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 same same ADJ JJ Degree=Pos _ _ _ _ 15 region region NOUN NN Number=Sing _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 reciprocal reciprocal ADJ JJ Degree=Pos _ _ _ _ 19 translocation translocation NOUN NN Number=Sing _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 creates create VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 BCR Bcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 ABL Abl NOUN NN Number=Sing _ _ _ _ 26 chimera chimera NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 Philadelphia Philadelphia PROPN NNP Number=Sing _ _ _ _ 30 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 Ph ph NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 hallmark hallmark NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 CML cml NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 ; ; PUNCT , _ _ _ _ _ 41 hLH hLh NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 2 2 NUM CD NumType=Card _ _ _ _ 44 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 45 retained retain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 46 on on ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 derivative derivative NOUN NN Number=Sing _ _ _ _ 49 9 9 NUM CD NumType=Card _ _ _ _ 50 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 53 therefore therefore ADV RB _ _ _ _ _ 54 centromeric centromeric ADJ JJ Degree=Pos _ _ _ _ 55 of of ADP IN _ _ _ _ _ 56 c- c- SYM NFP _ _ _ _ SpaceAfter=No 57 ABL ABL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 7802 # text = The proximity of hLH-2 to the breakpoint on chromosome 9 raises the possibility of cis-activation by the t(9;22)(q34;q11) translocation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 proximity proximity NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 hLH hLH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 breakpoint breakpoint NOUN NN Number=Sing _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 chromosome chromosome ADJ JJ Degree=Pos _ _ _ _ 12 9 9 NUM CD NumType=Card _ _ _ _ 13 raises rais NOUN NNS Number=Plur _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 possibility possibility NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 cis cis DET DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 18 -activation -activation NOUN NN Number=Sing _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 t( t( SYM NFP _ _ _ _ SpaceAfter=No 22 9;22 9;22 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 q34;q11 q34;q11 X LS _ _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 translocation translocation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 7803 # text = In addition to finding hLH-2 expression in all cases of CML, expression was observed in lymphoid malignancies and myeloid cell lines, but not in primary cases of acute myelogenous leukaemia. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 to to SCONJ IN _ _ _ _ _ 4 finding find VERB VBG VerbForm=Ger _ _ _ _ 5 hLH hLh NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 all all DET DT _ _ _ _ _ 11 cases case NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 CML CML NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 20 malignancies malignancy NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 myeloid myeloid VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 but but CCONJ CC _ _ _ _ _ 27 not not ADV RB _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 primary primary ADJ JJ Degree=Pos _ _ _ _ 30 cases case NOUN NNS Number=Plur _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 acute acute ADJ JJ Degree=Pos _ _ _ _ 33 myelogenous myelogenous ADJ JJ Degree=Pos _ _ _ _ 34 leukaemia leukaemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 7804 # text = The role of hLH-2 in the development or progression of leukaemia is not known. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 hLH hLH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 development development NOUN NN Number=Sing _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 progression progression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 leukaemia leukaemia NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 known known ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 7805 # text = However, hLH-2 may prove useful as a marker of CML for monitoring residual disease. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 hLH hLH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 may may AUX MD VerbForm=Fin _ _ _ _ 7 prove prove VERB VB VerbForm=Inf _ _ _ _ 8 useful useful ADJ JJ Degree=Pos _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 marker marker NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 CML cml PROPN NNP Number=Sing _ _ _ _ 14 for for SCONJ IN _ _ _ _ _ 15 monitoring monitor VERB VBG VerbForm=Ger _ _ _ _ 16 residual residual ADJ JJ Degree=Pos _ _ _ _ 17 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7806 # text = Document 0030011215 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011215 0030011215 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7807 # text = Evidence for lowered induction of nuclear factor kappa B in activated human T lymphocytes during aging. 1 Evidence evidence NOUN NN Number=Sing _ _ _ _ 2 for for ADP IN _ _ _ _ _ 3 lowered lowered VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 induction induction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 T t NOUN NN Number=Sing _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 15 during during ADP IN _ _ _ _ _ 16 aging aging NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7808 # text = Transcription factor NF kappa B (nuclear factor kappa B) is induced in T lymphocytes from young individuals following activation with a variety of stimuli including anti-CD3, phorbol myristate acetate (PMA), and tumor necrosis factor-alpha (TNF-alpha). 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ _ 4 kappa kappa PROPN NNP Number=Sing _ _ _ _ 5 B B PROPN NNP Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 young young ADJ JJ Degree=Pos _ _ _ _ 19 individuals individual NOUN NNS Number=Plur _ _ _ _ 20 following follow VERB VBG VerbForm=Ger _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 variety variety NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 27 including include VERB VBG VerbForm=Ger _ _ _ _ 28 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 31 myristate myristate NOUN NN Number=Sing _ _ _ _ 32 acetate acetate NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 tumor tumor NOUN NN Number=Sing _ _ _ _ 39 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 40 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 alpha alpha NOUN NN Number=Sing _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 7809 # text = In contrast, activated T lymphocytes from older individuals show a significant reduction in the induction of NF kappa B in response to the same stimuli. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 older older ADJ JJR Degree=Cmp _ _ _ _ 9 individuals individual NOUN NNS Number=Plur _ _ _ _ 10 show show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 significant significant ADJ JJ Degree=Pos _ _ _ _ 13 reduction reduction NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ _ 19 kappa kappa PROPN NNP Number=Sing _ _ _ _ 20 B b PROPN NNP Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 response response NOUN NN Number=Sing _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 same same ADJ JJ Degree=Pos _ _ _ _ 26 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 7810 # text = The age-related decline in induction of NF kappa B could not be attributed to alteration in the composition of subunits, p50 and p65 were found to be the predominant subunits of induced NF kappa 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 age age NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 related related ADJ JJ Degree=Pos _ _ _ _ 5 decline decline NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 induction induction NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ _ 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B B PROPN NNP Number=Sing _ _ _ _ 12 could could AUX MD VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 attributed attribute VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 alteration alteration NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 composition composition NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 p50 p50 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 p65 p65 NUM CD NumType=Card _ _ _ _ 27 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 to to PART TO _ _ _ _ _ 30 be be AUX VB VerbForm=Inf _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 predominant predominant ADJ JJ Degree=Pos _ _ _ _ 33 subunits subunit NOUN NNS Number=Plur _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 NF NF PROPN NNP Number=Sing _ _ _ _ 37 kappa kappa PROPN NNP Number=Sing _ _ _ _ # sent_id = 7811 # text = B in T cells from young as well as elderly donors. 1 B b NOUN NN Number=Sing _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 young young ADJ JJ Degree=Pos _ _ _ _ 7 as as ADV RB _ _ _ _ _ 8 well well ADV RB Degree=Pos _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 elderly elderly ADJ JJ Degree=Pos _ _ _ _ 11 donors donor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 7812 # text = Furthermore, similar levels of NF kappa B were found in the cytosols of unactivated T cells from both young and elderly donors suggesting that precursor levels of NF kappa B remain unaltered during aging. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 similar similar ADJ JJ Degree=Pos _ _ _ _ 4 levels level NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ _ 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B B PROPN NNP Number=Sing _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 cytosols cytosol NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 unactivated unactivated ADJ JJ Degree=Pos _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 both both CCONJ CC _ _ _ _ _ 20 young young ADJ JJ Degree=Pos _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 elderly elderly ADJ JJ Degree=Pos _ _ _ _ 23 donors donor NOUN NNS Number=Plur _ _ _ _ 24 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 precursor precursor ADJ JJ Degree=Pos _ _ _ _ 27 levels level NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 NF NF PROPN NNP Number=Sing _ _ _ _ 30 kappa kappa PROPN NNP Number=Sing _ _ _ _ 31 B b PROPN NNP Number=Sing _ _ _ _ 32 remain remain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 unaltered unaltered ADJ JJ Degree=Pos _ _ _ _ 34 during during ADP IN _ _ _ _ _ 35 aging aging NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 7813 # text = These results suggest that an age-associated decline in the induction of NF kappa B in activated T cells from elderly individuals may be attributable to altered regulation of the inhibitor, I kappa B, and may play an important role in immune dysregulation accompanying aging. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 age age NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 decline decline NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ _ 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B B PROPN NNP Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 elderly elderly ADJ JJ Degree=Pos _ _ _ _ 23 individuals individual NOUN NNS Number=Plur _ _ _ _ 24 may may AUX MD VerbForm=Fin _ _ _ _ 25 be be AUX VB VerbForm=Inf _ _ _ _ 26 attributable attributable ADJ JJ Degree=Pos _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 altered alter VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 regulation regulation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 35 kappa kappa PROPN NNP Number=Sing _ _ _ _ 36 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 may may AUX MD VerbForm=Fin _ _ _ _ 40 play play VERB VB VerbForm=Inf _ _ _ _ 41 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 important important ADJ JJ Degree=Pos _ _ _ _ 43 role role NOUN NN Number=Sing _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 immune immune ADJ JJ Degree=Pos _ _ _ _ 46 dysregulation dysregulation NOUN NN Number=Sing _ _ _ _ 47 accompanying accompany VERB VBG VerbForm=Ger _ _ _ _ 48 aging ag VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7814 # text = Document 0030011219 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011219 0030011219 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7815 # text = Expression of Ah receptor (TCDD receptor) during human monocytic differentiation. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Ah ah PROPN NNP Number=Sing _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 TCDD tCDd NOUN NN Number=Sing _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 during during ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 12 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7816 # text = We have previously found a high expression of human 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 high high ADJ JJ Degree=Pos _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ # sent_id = 7817 # text = Ah receptor (TCDD receptor) mRNA in peripheral blood cells of individuals. 1 Ah ah ADJ JJ Degree=Pos _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 TCDD tCDd NOUN NN Number=Sing _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 10 blood blood NOUN NN Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 7818 # text = In this paper, the expression of this gene in blood cells was first investigated in fractions of nucleated cells, revealing predominant expression of the Ah receptor gene in the monocyte fraction. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 paper paper NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 blood blood NOUN NN Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 first first ADV RB _ _ _ _ _ 15 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 fractions fraction NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 nucleated nucleate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 revealing reveal VERB VBG VerbForm=Ger _ _ _ _ 23 predominant predominant ADJ JJ Degree=Pos _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 Ah ah PROPN NNP Number=Sing _ _ _ _ 28 receptor receptor NOUN NN Number=Sing _ _ _ _ 29 gene gene NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 33 fraction fraction NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 7819 # text = Then the expression levels of AhR mRNA in various hematopoietic cell lines were examined together with those of Arnt and P450IA1. 1 Then then ADV RB PronType=Dem _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 levels level NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 AhR AhR PROPN NNP Number=Sing _ _ _ _ 7 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 various various ADJ JJ Degree=Pos _ _ _ _ 10 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 lines line NOUN NNS Number=Plur _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 together together ADV RB _ _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 Arnt Arnt PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 P450IA1 P450ia1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 7820 # text = AhR was expressed at high levels in monocytoid U937, THP1, and HEL/S cells, and at moderate levels in promyelocytic HL60 cells and erythroblastic HEL cells. 1 AhR Ahr PROPN NNP Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 at at ADP IN _ _ _ _ _ 5 high high ADJ JJ Degree=Pos _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 monocytoid monocytoid ADJ JJ Degree=Pos _ _ _ _ 9 U937 U937 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 THP1 THP1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 HEL/ HEL/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 15 S s ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 at at ADP IN _ _ _ _ _ 20 moderate moderate ADJ JJ Degree=Pos _ _ _ _ 21 levels level NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ _ 24 HL60 HL60 NUM CD NumType=Card _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 erythroblastic erythroblastic ADJ JJ Degree=Pos _ _ _ _ 28 HEL Hel ADJ JJ Degree=Pos _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 7821 # text = However, it was not detected in lymphoid cells MOLT4 (T cell) and BALL1 (B cell), nor in K562 erythroblasts. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 MOLT4 Molt4 NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 T t NUM CD NumType=Card _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 BALL1 Ball1 NUM CD NumType=Card _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 B b NOUN NN Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 nor nor CCONJ CC _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 K562 K562 NUM CD NumType=Card _ _ _ _ 25 erythroblasts erythroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 7822 # text = Furthermore, a specific induction of AhR during monocytic differentiation was investigated in HL60 and HEL cells. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 induction induction NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 AhR AhR PROPN NNP Number=Sing _ _ _ _ 8 during during ADP IN _ _ _ _ _ 9 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 10 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 HL60 HL60 PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 HEL Hel ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 7823 # text = HL60 cells were induced to differentiate toward monocytes-macrophages by incubation with phorbol ester, showing a 5- to 2-fold increase of AhR mRNA. 1 HL60 HL60 NUM CD NumType=Card _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 differentiate differentiate VERB VB VerbForm=Inf _ _ _ _ 7 toward toward ADP IN _ _ _ _ _ 8 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 incubation incubation NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 15 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 showing show VERB VBG VerbForm=Ger _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 fold fold NOUN NN Number=Sing _ _ _ _ 25 increase increase NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 AhR AhR PROPN NNP Number=Sing _ _ _ _ 28 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 7824 # text = The incubation with transforming growth factor beta 1 and 1 alpha,25-dihydroxyvitamin D3 resulted in a 5- to 7-fold increase of AhR mRNA. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 incubation incubation NOUN NN Number=Sing _ _ _ _ 3 with with SCONJ IN _ _ _ _ _ 4 transforming transforming VERB VBG VerbForm=Ger _ _ _ _ 5 growth growth NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 beta beta NOUN NN Number=Sing _ _ _ _ 8 1 1 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 1 1 NUM CD NumType=Card _ _ _ _ 11 alpha,25 alpha,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 -dihydroxyvitamin -dihydroxyvitamin ADJ JJ Degree=Pos _ _ _ _ 13 D3 D3 NOUN NN Number=Sing _ _ _ _ 14 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 fold fold NOUN NN Number=Sing _ _ _ _ 23 increase increase NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 AhR AhR PROPN NNP Number=Sing _ _ _ _ 26 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 7825 # text = The HEL cells also exhibited a similar elevation of AhR mRNA level, when they had differentiated toward monocyte-macrophage cells by these combined inducers, but little change in the mRNA level was observed when the cells were induced to differentiate into other cell types. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 HEL Hel ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 exhibited exhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 similar similar ADJ JJ Degree=Pos _ _ _ _ 8 elevation elevation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 AhR AhR PROPN NNP Number=Sing _ _ _ _ 11 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 12 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 when when ADV WRB PronType=Int _ _ _ _ 15 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 16 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 toward toward ADP IN _ _ _ _ _ 19 monocyte- monocyte- SYM NFP _ _ _ _ SpaceAfter=No 20 macrophage macrophage ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 24 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 inducers inducer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 but but CCONJ CC _ _ _ _ _ 28 little little ADJ JJ Degree=Pos _ _ _ _ 29 change change NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 33 level level NOUN NN Number=Sing _ _ _ _ 34 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 35 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 when when ADV WRB PronType=Int _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ _ 39 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 40 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 41 to to PART TO _ _ _ _ _ 42 differentiate differentiate VERB VB VerbForm=Inf _ _ _ _ 43 into into ADP IN _ _ _ _ _ 44 other other ADJ JJ Degree=Pos _ _ _ _ 45 cell cell NOUN NN Number=Sing _ _ _ _ 46 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 7826 # text = Treatment of the differentiated HL60 cells with 3-methylcholanthrene, a ligand of AhR, induced the expression of the P450IA1 gene. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 HL60 HL60 NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 methylcholanthrene methylcholanthrene NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 ligand ligand NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 AhR AhR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 P450IA1 P450ia1 PROPN NNP Number=Sing _ _ _ _ 23 gene gene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 7827 # text = These results indicated that expression of 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ # sent_id = 7828 # text = AhR mRNA was significantly induced during monocytic differentiation and that the differentiated cells were responsive to xenobiotics. 1 AhR AhR PROPN NNP Number=Sing _ _ _ _ 2 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 significantly significantly ADV RB _ _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 during during ADP IN _ _ _ _ _ 7 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 8 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 differentiated differentiated ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 xenobiotics xenobiotic NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 7829 # text = Our results suggest that AhR may play an important role in the function of monocytes and also in the eventual activation of environmental carcinogens. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 AhR AhR PROPN NNP Number=Sing _ _ _ _ 6 may may AUX MD VerbForm=Fin _ _ _ _ 7 play play VERB VB VerbForm=Inf _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 important important ADJ JJ Degree=Pos _ _ _ _ 10 role role NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 function function NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 also also ADV RB _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 eventual eventual ADJ JJ Degree=Pos _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 environmental environmental ADJ JJ Degree=Pos _ _ _ _ 24 carcinogens carcinogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7830 # text = Document 0030011228 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011228 0030011228 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7831 # text = Induction of IL-8 expression in T cells uses the CD28 costimulatory pathway. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 8 8 NUM CD NumType=Card _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 uses use VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 CD28 Cd28 NOUN NN Number=Sing _ _ _ _ 13 costimulatory costimulatory NOUN NN Number=Sing _ _ _ _ 14 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7832 # text = IL-8, a potent chemotactic factor for neutrophil granulocytes and lymphocytes, is a proinflammatory cytokine secreted by a variety of cell types, including T cells. 1 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 potent potent ADJ JJ Degree=Pos _ _ _ _ 7 chemotactic chemotactic ADJ JJ Degree=Pos _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 neutrophil neutrophil ADJ JJ Degree=Pos _ _ _ _ 11 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 18 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 19 secreted secret VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 variety variety NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 including include VERB VBG VerbForm=Ger _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 7833 # text = Stimulation of the CD28 cell surface molecule delivers costimulatory signals essential for lymphokine production in activated T cells via a conserved sequence element found in the promoter of several lymphokine genes. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 surface surface NOUN NN Number=Sing _ _ _ _ 7 molecule molecule NOUN NN Number=Sing _ _ _ _ 8 delivers deliver VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 10 signals signal NOUN NNS Number=Plur _ _ _ _ 11 essential essential ADJ JJ Degree=Pos _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 14 production production NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 via via ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 sequence sequence NOUN NN Number=Sing _ _ _ _ 23 element element NOUN NN Number=Sing _ _ _ _ 24 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 several several ADJ JJ Degree=Pos _ _ _ _ 30 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 31 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 7834 # text = Anti-CD28-stimulated 1 Anti-CD28-stimulated Anti-CD28-stimulated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ # sent_id = 7835 # text = T cells produced significant amounts of IL-8; additionally, costimulation with anti-CD3 and anti-CD28 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 produced produce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 significant significant ADJ JJ Degree=Pos _ _ _ _ 5 amounts amount NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 8 8 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ; ; PUNCT , _ _ _ _ _ 11 additionally additionally ADV RB _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 anti-CD28 anti-CD28 NUM CD NumType=Card _ _ _ _ # sent_id = 7836 # text = Abs resulted in a synergistic induction of IL-8 secretion. 1 Abs Abs PROPN NNP Number=Sing _ _ _ _ 2 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 6 induction induction NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 8 8 NUM CD NumType=Card _ _ _ _ 11 secretion secretion NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 7837 # text = Sequence homology, single nucleotide mutations, and anti-CD28 1 Sequence sequence NOUN NN Number=Sing _ _ _ _ 2 homology homology NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 single single ADJ JJ Degree=Pos _ _ _ _ 5 nucleotide nucleotide NOUN NN Number=Sing _ _ _ _ 6 mutations mutation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 anti-CD28 anti-CD28 NUM CD NumType=Card _ _ _ _ # sent_id = 7838 # text = Ab stimulation studies established that the NF-kappa B-like sequence in the promoter of the IL-8 gene functioned as a CD28 response element. 1 Ab Ab ADJ JJ Degree=Pos _ _ _ _ 2 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 established establish VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 like like ADJ JJ Degree=Pos _ _ _ _ 13 sequence sequence NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 8 8 NUM CD NumType=Card _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 functioned functioned VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 27 response response NOUN NN Number=Sing _ _ _ _ 28 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 7839 # text = Furthermore, cyclosporin A, but not rapamycin, blocked the synergistic induction of IL-8 expression achieved with anti-CD3 and anti-CD28 costimulation. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 4 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 but but CCONJ CC _ _ _ _ _ 7 not not ADV RB _ _ _ _ _ 8 rapamycin rapamycin ADV RB _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 13 induction induction NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 8 8 NUM CD NumType=Card _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 achieved achieve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 anti-CD28 anti-CD28 NUM CD NumType=Card _ _ _ _ 24 costimulation costimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 7840 # text = The involvement of a CD28 response element in the induction of IL-8 expression in activated T cells may provide new insights into the pathogenesis and persistence of immune disorders characterized by increased levels of IL-8, such as psoriasis and rheumatoid arthritis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 involvement involvement NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 CD28 CD28 NUM CD NumType=Card _ _ _ _ 6 response response NOUN NN Number=Sing _ _ _ _ 7 element element NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 8 8 NUM CD NumType=Card _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 may may AUX MD VerbForm=Fin _ _ _ _ 21 provide provide VERB VB VerbForm=Inf _ _ _ _ 22 new new ADJ JJ Degree=Pos _ _ _ _ 23 insights insight NOUN NNS Number=Plur _ _ _ _ 24 into into ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 persistence persistence NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 immune immune ADJ JJ Degree=Pos _ _ _ _ 31 disorders disorder NOUN NNS Number=Plur _ _ _ _ 32 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 levels level NOUN NNS Number=Plur _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 such such ADJ JJ Degree=Pos _ _ _ _ 42 as as ADP IN _ _ _ _ _ 43 psoriasis psoriasis NOUN NN Number=Sing _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 rheumatoid rheumatoid ADJ JJ Degree=Pos _ _ _ _ 46 arthritis arthritis NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7841 # text = Document 0030011230 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011230 0030011230 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7842 # text = Genes encoding general initiation factors for RNA polymerase II transcription are dispersed in the human genome. 1 Genes gene NOUN NNS Number=Plur _ _ _ _ 2 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 3 general general ADJ JJ Degree=Pos _ _ _ _ 4 initiation initiation NOUN NN Number=Sing _ _ _ _ 5 factors factor NOUN NNS Number=Plur _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 RNA RNA PROPN NNP Number=Sing _ _ _ _ 8 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 9 II ii NUM CD NumType=Card _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 dispersed disperse VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 genome genome NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7843 # text = General transcription factors are required for accurate initiation of transcription by RNA polymerase II. 1 General General ADJ JJ Degree=Pos _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 accurate accurate ADJ JJ Degree=Pos _ _ _ _ 8 initiation initiation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 RNA RNA PROPN NNP Number=Sing _ _ _ _ 13 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 14 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 7844 # text = Human cDNAs encoding subunits of these factors have been cloned and sequenced. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 cDNAs cDNA NOUN NNS Number=Plur _ _ _ _ 3 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 4 subunits subunit NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 factors factor NOUN NNS Number=Plur _ _ _ _ 8 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 10 cloned clon VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 sequenced sequence VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 7845 # text = Using fluorescence in situ hybridization (FISH), we show here that the genes encoding the TATA-box binding protein (TBP), TFIIB, TFIIE alpha, TFIIE beta, RAP30, RAP74 and the 62 kDa subunit, of TFIIH are located at the human chromosomal bands 6q26-27, 1p21-22, 3q21-24, 8p12, 13q14, 19p13.3 and 11p14-15.1, respectively. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 fluorescence fluorescence NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 situ situ NOUN NN Number=Sing _ _ _ _ 5 hybridization hybridization NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 FISH Fish PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 here here ADV RB PronType=Dem _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ _ 16 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 TATA TATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 box box NOUN NN Number=Sing _ _ _ _ 21 binding binding VERB VBG VerbForm=Ger _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 TBP TBP NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 TFIIB TFIIB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 TFIIE TFIIE PROPN NNP Number=Sing _ _ _ _ 30 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 TFIIE TFIIE PROPN NNP Number=Sing _ _ _ _ 33 beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 RAP30 RAP30 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 RAP74 RAP74 PROPN NNP Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 62 62 NUM CD NumType=Card _ _ _ _ 41 kDa kDa PROPN NNP Number=Sing _ _ _ _ 42 subunit subunit NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 TFIIH TFIIh DET DT _ _ _ _ _ 46 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 47 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 48 at at ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 human human ADJ JJ Degree=Pos _ _ _ _ 51 chromosomal chromosomal NOUN NN Number=Sing _ _ _ _ 52 bands band NOUN NNS Number=Plur _ _ _ _ 53 6q26 6q26 NUM CD NumType=Card _ _ _ SpaceAfter=No 54 -27 -27 NUM CD NumType=Card _ _ _ SpaceAfter=No 55 , , PUNCT , _ _ _ _ _ 56 1p21-22 1p21-22 NUM CD NumType=Card _ _ _ SpaceAfter=No 57 , , PUNCT , _ _ _ _ _ 58 3q21-24 3q21-24 NUM CD NumType=Card _ _ _ SpaceAfter=No 59 , , PUNCT , _ _ _ _ _ 60 8p12 8p12 NUM CD NumType=Card _ _ _ SpaceAfter=No 61 , , PUNCT , _ _ _ _ _ 62 13q14 13q14 NUM CD NumType=Card _ _ _ SpaceAfter=No 63 , , PUNCT , _ _ _ _ _ 64 19p13.3 19p13.3 NUM CD NumType=Card _ _ _ _ 65 and and CCONJ CC _ _ _ _ _ 66 11p14 11p14 NUM CD NumType=Card _ _ _ SpaceAfter=No 67 - - SYM SYM _ _ _ _ SpaceAfter=No 68 15.1 15.1 NUM CD NumType=Card _ _ _ SpaceAfter=No 69 , , PUNCT , _ _ _ _ _ 70 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 71 . . PUNCT . _ _ _ _ _ # sent_id = 7846 # text = This dispersed localization of a group of functionally related gene provides insights into the molecular mechanism of human genome evolution and their possible involvement in human diseases. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 dispersed dispersed VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 localization localization NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 group group NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 functionally functionally ADV RB _ _ _ _ _ 9 related related ADJ JJ Degree=Pos _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 insights insight NOUN NNS Number=Plur _ _ _ _ 13 into into ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 16 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 genome genome NOUN NN Number=Sing _ _ _ _ 20 evolution evolution NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 23 possible possible ADJ JJ Degree=Pos _ _ _ _ 24 involvement involvement NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7847 # text = Document 0030011239 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011239 0030011239 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7848 # text = Interferon-gamma and the sexual dimorphism of autoimmunity. 1 Interferon Interferon PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 gamma gamma NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 sexual sexual ADJ JJ Degree=Pos _ _ _ _ 7 dimorphism dimorphism NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 autoimmunity autoimmunity NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7849 # text = The sexual difference in the incidence of autoimmune diseases has remained an enigma for many years. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 sexual sexual ADJ JJ Degree=Pos _ _ _ _ 3 difference difference NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 incidence incidence NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 autoimmune autoimmune ADJ JJ Degree=Pos _ _ _ _ 9 diseases diseasis NOUN NNS Number=Plur _ _ _ _ 10 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 remained remain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 enigma enigma NOUN NN Number=Sing _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 many many ADJ JJ Degree=Pos _ _ _ _ 16 years year NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 7850 # text = In the examination of the induction of autoimmunity in transgenic mice, evidence has been obtained further implicating the lymphokine interferon-gamma in the etiology of autoimmunity. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 examination examination NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 induction induction NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 autoimmunity autoimmunity NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 11 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 evidence evidence NOUN NN Number=Sing _ _ _ _ 14 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 16 obtained obtain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 further further SCONJ IN _ _ _ _ _ 18 implicating implicate VERB VBG VerbForm=Ger _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 21 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 gamma gamma NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 etiology etiology NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 autoimmunity autoimmunity NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 7851 # text = Sex steroid regulation of the production of this molecule, as well as other cytokines, may help explain the gender-specific differences in the immune system, including autoimmunity. 1 Sex sex NOUN NN Number=Sing _ _ _ _ 2 steroid steroid VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 regulation regulation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 production production NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 9 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 as as ADV RB _ _ _ _ _ 12 well well ADV RB Degree=Pos _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 other other ADJ JJ Degree=Pos _ _ _ _ 15 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 may may AUX MD VerbForm=Fin _ _ _ _ 18 help help VERB VB VerbForm=Inf _ _ _ _ 19 explain explain VERB VB VerbForm=Inf _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 gender gender NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 specific specific ADJ JJ Degree=Pos _ _ _ _ 24 differences difference NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 immune immune ADJ JJ Degree=Pos _ _ _ _ 28 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 including include VERB VBG VerbForm=Ger _ _ _ _ 31 autoimmunity autoimmunity NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7852 # text = Document 0030011254 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011254 0030011254 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7853 # text = Alternative splicing of RNA transcripts encoded by the murine p105 NF-kappa B gene generates I kappa B gamma isoforms with different inhibitory activities. 1 Alternative alternative ADJ JJ Degree=Pos _ _ _ _ 2 splicing splicing NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 RNA RNA PROPN NNP Number=Sing _ _ _ _ 5 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 6 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 murine murine NOUN NN Number=Sing _ _ _ _ 10 p105 p105 NOUN NN Number=Sing _ _ _ _ 11 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ 14 B b PROPN NNP Number=Sing _ _ _ _ 15 gene gene PROPN NNP Number=Sing _ _ _ _ 16 generates generate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 kappa kappa X FW Foreign=Yes _ _ _ _ 19 B b ADJ JJ Degree=Pos _ _ _ _ 20 gamma gamma NOUN NN Number=Sing _ _ _ _ 21 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 different different ADJ JJ Degree=Pos _ _ _ _ 24 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 25 activities activity NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7854 # text = The gene encoding the 105-kDa protein (p105) precursor of the p50 subunit of transcription factor NF-kappa B also encodes a p70 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 105 105 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kDa kDa NOUN NN Number=Sing _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 p105 p105 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 precursor precursor NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 p50 p50 NOUN NN Number=Sing _ _ _ _ 16 subunit subunit NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappa kappa PROPN NNP Number=Sing _ _ _ _ 23 B b PROPN NNP Number=Sing _ _ _ _ 24 also also ADV RB _ _ _ _ _ 25 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 p70 p70 NOUN NN Number=Sing _ _ _ _ # sent_id = 7855 # text = I kappa B protein, I kappa B gamma, which is identical to the C-terminal 607 amino acids of p105. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa X FW Foreign=Yes _ _ _ _ 3 B b ADJ JJ Degree=Pos _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B b PROPN NNP Number=Sing _ _ _ _ 9 gamma gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 identical identical ADJ JJ Degree=Pos _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 C- C- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 terminal terminal NOUN NN Number=Sing _ _ _ _ 18 607 607 NUM CD NumType=Card _ _ _ _ 19 amino amino DET DT _ _ _ _ _ 20 acids acid NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 p105 p105 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 7856 # text = Here we show that alternative RNA splicing generates I kappa B gamma isoforms with properties different from those of p70. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 6 RNA RNA NOUN NN Number=Sing _ _ _ _ 7 splicing splicing NOUN NN Number=Sing _ _ _ _ 8 generates generate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 kappa kappa X FW Foreign=Yes _ _ _ _ 11 B b ADJ JJ Degree=Pos _ _ _ _ 12 gamma gamma NOUN NN Number=Sing _ _ _ _ 13 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 properties property NOUN NNS Number=Plur _ _ _ _ 16 different different ADJ JJ Degree=Pos _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 p70 p70 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 7857 # text = One 63-kDa isoform, termed I kappa B gamma-1, which lacks 59 amino acids C-terminal to ankyrin repeat 7, has a novel 35-amino acid C terminus encoded by an alternative reading frame of the p105 gene. 1 One one NUM CD NumType=Card _ _ _ _ 2 63 63 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kDa kDa NOUN NN Number=Sing _ _ _ _ 5 isoform isoform NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B b PROPN NNP Number=Sing _ _ _ _ 11 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 lacks lack VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 59 59 NUM CD NumType=Card _ _ _ _ 18 amino amino NOUN NN Number=Sing _ _ _ _ 19 acids acid NOUN NNS Number=Plur _ _ _ _ 20 C- C- PUNCT : _ _ _ _ SpaceAfter=No 21 terminal terminal NOUN NN Number=Sing _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 ankyrin ankyrin ADV RB _ _ _ _ _ 24 repeat repeat VERB VB VerbForm=Inf _ _ _ _ 25 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 novel novel NOUN NN Number=Sing _ _ _ _ 30 35 35 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 amino amino DET DT _ _ _ _ _ 33 acid acid ADJ JJ Degree=Pos _ _ _ _ 34 C c NOUN NN Number=Sing _ _ _ _ 35 terminus terminus NOUN NN Number=Sing _ _ _ _ 36 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 by by ADP IN _ _ _ _ _ 38 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 40 reading reading NOUN NN Number=Sing _ _ _ _ 41 frame frame NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 p105 p105 NOUN NN Number=Sing _ _ _ _ 45 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 7858 # text = A 55-kDa isoform, I kappa B gamma-2, lacks the 190 C-terminal amino acids of p70I kappa B gamma. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 55 55 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kDa kDa NOUN NN Number=Sing _ _ _ _ 5 isoform isoform NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B B PROPN NNP Number=Sing _ _ _ _ 10 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 lacks lack VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 190 190 NUM CD NumType=Card _ _ _ _ 17 C- C- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 terminal terminal NOUN NN Number=Sing _ _ _ _ 19 amino amino DET DT _ _ _ _ _ 20 acids acid NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 p70 p70 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ 25 B b PROPN NNP Number=Sing _ _ _ _ 26 gamma gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 7859 # text = In contrast to p70I kappa 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 p70 p70 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 7860 # text = B gamma, which is a cytoplasmic protein, I kappa B gamma-1 is found in both the cytoplasm and nucleus, whereas I kappa B gamma-2 is predominantly nuclear. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 kappa kappa X FW Foreign=Yes _ _ _ _ 12 B B ADJ JJ Degree=Pos _ _ _ _ 13 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 both both CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 nucleus nucleus ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 whereas whereas SCONJ IN _ _ _ _ _ 26 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 27 kappa kappa X FW Foreign=Yes _ _ _ _ 28 B b ADJ JJ Degree=Pos _ _ _ _ 29 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ _ 32 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 predominantly predominantly ADV RB _ _ _ _ _ 34 nuclear nuclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 7861 # text = The I kappa 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 3 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 7862 # text = B gamma isoforms also display differences in specificity and affinity for Rel/NF-kappa B proteins. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 gamma gamma NOUN NN Number=Sing _ _ _ _ 3 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 display display VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 differences difference NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 specificity specificity NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 affinity affinity NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 / / PUNCT , _ _ _ _ SpaceAfter=No 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 7863 # text = While p70I kappa 1 While while SCONJ IN _ _ _ _ _ 2 p70 p70 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 4 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 7864 # text = B gamma inhibits p50-, p65-, and c-Rel-mediated transactivation and/or DNA binding, both I kappa B gamma-1 and I kappa B gamma-2 are specific for p50 and have different affinities for this subunit. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 gamma gamma NOUN NN Number=Sing _ _ _ _ 3 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 4 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT : _ _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 -, -, PUNCT . _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 c class NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 Rel-mediated Rel-mediated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 or or CCONJ CC _ _ _ _ _ 17 DNA dna NOUN NN Number=Sing _ _ _ _ 18 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 both both CCONJ CC _ _ _ _ _ 21 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 22 kappa kappa PROPN NNP Number=Sing _ _ _ _ 23 B b PROPN NNP Number=Sing _ _ _ _ 24 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 29 kappa kappa PROPN NNP Number=Sing _ _ _ _ 30 B b PROPN NNP Number=Sing _ _ _ _ 31 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 2 2 NUM CD NumType=Card _ _ _ _ 34 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 specific specific ADJ JJ Degree=Pos _ _ _ _ 36 for for ADP IN _ _ _ _ _ 37 p50 p50 NUM CD NumType=Card _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 40 different different ADJ JJ Degree=Pos _ _ _ _ 41 affinities affinity NOUN NNS Number=Plur _ _ _ _ 42 for for ADP IN _ _ _ _ _ 43 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 44 subunit subunit NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 7865 # text = The absence in I kappa B gamma-1 and I kappa B gamma-2 of a protein kinase A site whose phosphorylation modulates p70I kappa B gamma inhibitory activity suggests that alternative RNA splicing may be used to generate I kappa B gamma isoforms that respond differently to intracellular signals. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 absence absence NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B B PROPN NNP Number=Sing _ _ _ _ 7 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 12 kappa kappa PROPN NNP Number=Sing _ _ _ _ 13 B b PROPN NNP Number=Sing _ _ _ _ 14 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 kinase kinase NOUN NN Number=Sing _ _ _ _ 21 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 site site NOUN NN Number=Sing _ _ _ _ 23 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 24 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 25 modulates modulate NOUN NNS Number=Plur _ _ _ _ 26 p70 p70 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 28 kappa kappa X FW Foreign=Yes _ _ _ _ 29 B b X GW _ _ _ _ _ 30 gamma gamma X FW Foreign=Yes _ _ _ _ 31 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 32 activity activity NOUN NN Number=Sing _ _ _ _ 33 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 35 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 36 RNA RNa NOUN NN Number=Sing _ _ _ _ 37 splicing splicing NOUN NN Number=Sing _ _ _ _ 38 may may AUX MD VerbForm=Fin _ _ _ _ 39 be be AUX VB VerbForm=Inf _ _ _ _ 40 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 41 to to PART TO _ _ _ _ _ 42 generate generate VERB VB VerbForm=Inf _ _ _ _ 43 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 44 kappa kappa X FW Foreign=Yes _ _ _ _ 45 B b ADJ JJ Degree=Pos _ _ _ _ 46 gamma gamma NOUN NN Number=Sing _ _ _ _ 47 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 48 that that PRON WDT PronType=Rel _ _ _ _ 49 respond respond VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 50 differently differently ADV RB _ _ _ _ _ 51 to to ADP IN _ _ _ _ _ 52 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 53 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7866 # text = Document 0030011255 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011255 0030011255 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7867 # text = Stimulation of interleukin-1 alpha and interleukin-1 beta production in human monocytes by protein phosphatase 1 and 2A inhibitors. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 beta beta NOUN NN Number=Sing _ _ _ _ 12 production production NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 19 1 1 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 A a NOUN NN Number=Sing _ _ _ _ 23 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7868 # text = Protein phosphatases 1 and 2A are important in regulating cellular functions by controlling the phosphorylation state of their substrates. 1 Protein protein PROPN NNP Number=Sing _ _ _ _ 2 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ _ 3 1 1 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 A a NOUN NN Number=Sing _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 important important ADJ JJ Degree=Pos _ _ _ _ 9 in in SCONJ IN _ _ _ _ _ 10 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 11 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 12 functions function NOUN NNS Number=Plur _ _ _ _ 13 by by SCONJ IN _ _ _ _ _ 14 controlling controlle VERB VBG VerbForm=Ger _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 17 state state NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 substrates substrate NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 7869 # text = In human monocytes, the inhibitors of these phosphatases, okadaic acid and calyculin A, were found to increase the mRNA accumulation and cytokine production of interleukin-1 beta and interleukin-1 alpha. 1 In in ADP IN _ _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 9 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 12 acid acid NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 calyculin calyculin NOUN NN Number=Sing _ _ _ _ 15 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 increase increase VERB VB VerbForm=Inf _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 23 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 26 production production NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 beta beta NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ _ 36 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 7870 # text = The increased mRNA accumulation was found to be primarily because of the increase in the transcription rate of the interleukin-1 genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 4 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 primarily primarily ADV RB _ _ _ _ _ 10 because because ADP IN _ _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 increase increase NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 rate rate NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 7871 # text = Stimulation of interleukin-1 gene transcription may be caused by the stimulation of transcription factor activities, including those of AP-1, by these protein phosphatase inhibitors. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 may may AUX MD VerbForm=Fin _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 caused cause VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 activities activity NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 including include VERB VBG VerbForm=Ger _ _ _ _ 20 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 28 protein protein NOUN NN Number=Sing _ _ _ _ 29 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 30 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 7872 # text = Okadaic acid increased the synthesis of the interleukin-1 beta precursor and mature forms and their secretion. 1 Okadaic Okadaic ADJ JJ Degree=Pos _ _ _ _ 2 acid acid NOUN NN Number=Sing _ _ _ _ 3 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 beta beta NOUN NN Number=Sing _ _ _ _ 12 precursor precursor NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 mature mature ADJ JJ Degree=Pos _ _ _ _ 15 forms form NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 secretion secretion NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 7873 # text = This increased processing and secretion correlated with the stimulation of IL-1 beta convertase mRNA accumulation. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 increased increased VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 processing processing NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 secretion secretion NOUN NN Number=Sing _ _ _ _ 6 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 beta beta NOUN NN Number=Sing _ _ _ _ 15 convertase convertase NOUN NN Number=Sing _ _ _ _ 16 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 17 accumulation accumulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 7874 # text = The stimulation of interleukin-1 alpha production by okadaic acid was more modest than that of interleukin-1 beta. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 production production NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 11 acid acid NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 more more ADV RBR _ _ _ _ _ 14 modest modest ADJ JJ Degree=Pos _ _ _ _ 15 than than ADP IN _ _ _ _ _ 16 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 7875 # text = However, the phosphorylation of the precursor interleukin-1 alpha cytokine was increased. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 precursor precursor ADJ JJ Degree=Pos _ _ _ _ 8 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 7876 # text = These results show that protein phosphatase 1 and 2A inhibitors exert multiple effects on cytokine production in human monocytes and suggest that these two phosphatases play important roles in regulating interleukin-1 production. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 7 1 1 NUM CD NumType=Card _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 A a NOUN NN Number=Sing _ _ _ _ 11 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 12 exert exert ADP IN Typo=Yes _ _ _ _ 13 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 14 effects effect NOUN NNS Number=Plur _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 17 production production NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 25 two two NUM CD NumType=Card _ _ _ _ 26 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ _ 27 play play VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 important important ADJ JJ Degree=Pos _ _ _ _ 29 roles role NOUN NNS Number=Plur _ _ _ _ 30 in in SCONJ IN _ _ _ _ _ 31 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 32 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ _ 35 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7877 # text = Document 0030011257 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011257 0030011257 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7878 # text = Structure and function analysis of the human myeloid cell nuclear differentiation antigen promoter: evidence for the role of Sp1 and not of c-Myb or PU.1 in myelomonocytic lineage-specific expression. 1 Structure structure NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 function function NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 12 antigen antigen NOUN NN Number=Sing _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 : : PUNCT : _ _ _ _ _ 15 evidence evidence NOUN NN Number=Sing _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 role role NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 Myb Myb NOUN NN Number=Sing _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 myelomonocytic myelomonocytic ADJ JJ Degree=Pos _ _ _ _ 31 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 specific specific ADJ JJ Degree=Pos _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7879 # text = The human myeloid nuclear differentiation antigen (MNDA) is expressed specifically in maturing cells of the myelomonocytic lineage and in monocytes and granulocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 6 antigen antigen NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 MNDA MNDA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 specifically specifically ADV RB _ _ _ _ _ 13 in in SCONJ IN _ _ _ _ _ 14 maturing mature VERB VBG VerbForm=Ger _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 myelomonocytic myelomonocytic ADJ JJ Degree=Pos _ _ _ _ 19 lineage lineage NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 7880 # text = Epitope enhancement was used to confirm the strict lineage- and stage-specific expression of MNDA in bone marrow as well as in other paraffin-embedded fixed tissues. 1 Epitope Epitope ADJ JJ Degree=Pos _ _ _ _ 2 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 confirm confirm VERB VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 strict strict ADJ JJ Degree=Pos _ _ _ _ 9 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 stage stage NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 specific specific ADJ JJ Degree=Pos _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 MNDA MNDA PROPN NNP Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 bone bone NOUN NN Number=Sing _ _ _ _ 20 marrow marrow NOUN NN Number=Sing _ _ _ _ 21 as as ADV RB _ _ _ _ _ 22 well well ADV RB Degree=Pos _ _ _ _ 23 as as ADP IN _ _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 other other ADJ JJ Degree=Pos _ _ _ _ 26 paraffin- paraffin- PUNCT , _ _ _ _ SpaceAfter=No 27 embedded embedd VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 fixed fix VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 7881 # text = A 1-kb region of the gene that includes 5' flanking sequence was reported earlier to contain functional promoter activity and was specifically demethylated in expressing cells in contrast to null cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kb kb NOUN NN Number=Sing _ _ _ _ 5 region region NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 includes include VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ' ' PUNCT `` _ _ _ _ _ 13 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 14 sequence sequence NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 earlier earlier ADV RBR Degree=Cmp _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 contain contain VERB VB VerbForm=Inf _ _ _ _ 20 functional functional ADJ JJ Degree=Pos _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 specifically specifically ADV RB _ _ _ _ _ 26 demethylated demethylate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 expressing expresse ADJ JJ Degree=Pos _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 contrast contrast NOUN NN Number=Sing _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 null null ADJ JJ Degree=Pos _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 7882 # text = Further analysis has revealed that this 1-kb fragment promotes higher reporter gene activity in MNDA-expressing cells than non-expressing cells, indicating cell-specific differences in transactivation. 1 Further further ADV RB _ _ _ _ _ 2 analysis analysis PRON DT Number=Sing|PronType=Dem _ _ _ _ 3 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 7 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kb kb NOUN NN Number=Sing _ _ _ _ 10 fragment fragment NOUN NN Number=Sing _ _ _ _ 11 promotes promote VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 higher higher ADJ JJR Degree=Cmp _ _ _ _ 13 reporter reporter NOUN NN Number=Sing _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 MNDA MNDA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 than than ADP IN _ _ _ _ _ 22 non-expressing non-expresse ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 26 cell cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 specific specific ADJ JJ Degree=Pos _ _ _ _ 29 differences difference NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 transactivation transactivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 7883 # text = This sequence contains consensus elements consistent with myeloid-specific gene expression, including a PU.1 consensus site near the major transcription start site and a cluster of c-Myb sites located several hundred bases upstream of this region. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 sequence sequence NOUN NN Number=Sing _ _ _ _ 3 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 consensus consensus ADJ JJ Degree=Pos _ _ _ _ 5 elements element NOUN NNS Number=Plur _ _ _ _ 6 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 myeloid myeloid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 specific specific ADJ JJ Degree=Pos _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 including include VERB VBG VerbForm=Ger _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 17 consensus consensus NOUN NN Number=Sing _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ _ 19 near near ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 major major ADJ JJ Degree=Pos _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 start start NOUN NN Number=Sing _ _ _ _ 24 site site NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 cluster cluster NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 Myb Myb NOUN NN Number=Sing _ _ _ _ 32 sites site NOUN NNS Number=Plur _ _ _ _ 33 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 several several ADJ JJ Degree=Pos _ _ _ _ 35 hundred hundred NUM CD NumType=Card _ _ _ _ 36 bases base NOUN NNS Number=Plur _ _ _ _ 37 upstream upstream NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 40 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 7884 # text = However, analysis of deletion mutants localized nearly all of the promoter activity to a short region (-73 to -16) that did not include the cluster of c-Myb sites. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 deletion deletion NOUN NN Number=Sing _ _ _ _ 6 mutants mutant NOUN NNS Number=Plur _ _ _ _ 7 localized localize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 nearly nearly ADV RB _ _ _ _ _ 9 all all DET DT _ _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 promoter promoter ADJ JJ Degree=Pos _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 short short ADJ JJ Degree=Pos _ _ _ _ 17 region region NOUN NN Number=Sing _ _ _ _ 18 (- (- PUNCT . _ _ _ _ SpaceAfter=No 19 73 73 NUM CD NumType=Card _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 - - SYM SYM _ _ _ _ SpaceAfter=No 22 16 16 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 not not PART RB _ _ _ _ _ 27 include include VERB VB VerbForm=Inf _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 cluster cluster NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 Myb Myb NOUN NN Number=Sing _ _ _ _ 34 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 7885 # text = A 4-bp mutation of the core Sp1 consensus element (GC box) (-20) reduced overall promoter activity of the 1-kb fragment. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 bp bp NOUN NN Number=Sing _ _ _ _ 5 mutation mutation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 core core NOUN NN Number=Sing _ _ _ _ 9 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 10 consensus consensus NOUN NN Number=Sing _ _ _ _ 11 element element NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 GC Gc NOUN NN Number=Sing _ _ _ _ 14 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 (- (- PUNCT . _ _ _ _ SpaceAfter=No 17 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 overall overall ADJ JJ Degree=Pos _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kb kb NOUN NN Number=Sing _ _ _ _ 28 fragment fragment NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 7886 # text = Mutation of the PU.1 site did not significantly affect promoter activity. 1 Mutation Mutation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 PU.1 PU.1 PROPN NNP Number=Sing _ _ _ _ 5 site site NOUN NN Number=Sing _ _ _ _ 6 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 significantly significantly ADV RB _ _ _ _ _ 9 affect affect VERB VB VerbForm=Inf _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 7887 # text = Only a small region (-35 to +22) including the Sp1 element and transcription start site, but not the PU.1 site was footprinted. 1 Only only ADV RB _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 small small ADJ JJ Degree=Pos _ _ _ _ 4 region region NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 -35 -35 NUM CD NumType=Card _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 + + SYM SYM _ _ _ _ SpaceAfter=No 9 22 22 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 including include VERB VBG VerbForm=Ger _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 14 element element NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 start start NOUN NN Number=Sing _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 not not ADV RB _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 PU.1 Pu.1 NUM CD NumType=Card _ _ _ _ 24 site site NOUN NN Number=Sing _ _ _ _ 25 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 26 footprinted footprint VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 7888 # text = The 4-bp mutation of the core Sp1 consensus element abolished footprinting at the site and an antibody super-shift reaction showed that Sp1 is one of the factors binding the consensus site. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 bp bp NOUN NN Number=Sing _ _ _ _ 5 mutation mutation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 core core NOUN NN Number=Sing _ _ _ _ 9 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 10 consensus consensus NOUN NN Number=Sing _ _ _ _ 11 element element NOUN NN Number=Sing _ _ _ _ 12 abolished abolish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 footprinting footprint VERB VBG VerbForm=Ger _ _ _ _ 14 at at ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 site site NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 antibody antibody ADJ JJ Degree=Pos _ _ _ _ 20 super super ADV RB _ _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 shift shift ADJ JJ Degree=Pos _ _ _ _ 23 reaction reaction NOUN NN Number=Sing _ _ _ _ 24 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 one one NUM CD NumType=Card _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 factors factor NOUN NNS Number=Plur _ _ _ _ 32 binding bind VERB VBG VerbForm=Ger _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 consensus consensus NOUN NN Number=Sing _ _ _ _ 35 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 7889 # text = The Sp1 site also co-localizes with a DNase I hypersensitive site. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Sp1 sp1 NUM CD NumType=Card _ _ _ _ 3 site site NOUN NN Number=Sing _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 co-localizes co-localize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 DNase DNase NOUN NN Number=Sing _ _ _ _ 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 11 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 7890 # text = The results indicate that DNA methylation, chromatin structure, and transactivation at an Sp1 site contribute to the highly restricted expression of this myelomonocytic lineage specific gene. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 DNA dna NOUN NN Number=Sing _ _ _ _ 6 methylation methylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 9 structure structure NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 13 at at ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 16 site site NOUN NN Number=Sing _ _ _ _ 17 contribute contribute NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 highly highly ADV RB _ _ _ _ _ 21 restricted restricted VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 25 myelomonocytic myelomonocytic ADJ JJ Degree=Pos _ _ _ _ 26 lineage lineage NOUN NN Number=Sing _ _ _ _ 27 specific specific ADJ JJ Degree=Pos _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7891 # text = Document 0030011258 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011258 0030011258 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7892 # text = Molecular cloning of FKHRL1P2, a member of the developmentally regulated fork head domain transcription factor family. 1 Molecular Molecular ADJ JJ Degree=Pos _ _ _ _ 2 cloning cloning NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 FKHRL1 FKHRL1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 P2 p2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 member member NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 developmentally developmentally ADV RB _ _ _ _ _ 12 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 fork fork NOUN NN Number=Sing _ _ _ _ 14 head head NOUN NN Number=Sing _ _ _ _ 15 domain domain NOUN NN Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7893 # text = Here we report the expression of a fork head domain protein in human T helper cells. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 fork fork NOUN NN Number=Sing _ _ _ _ 9 head head NOUN NN Number=Sing _ _ _ _ 10 domain domain NOUN NN Number=Sing _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 helper helper ADJ JJR Degree=Cmp _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 7894 # text = We cloned and characterized a fork head cDNA from human T helper cell mRNA using differential display RT-PCR. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 cloned clon VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 characterized characterize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 fork fork NOUN NN Number=Sing _ _ _ _ 7 head head NOUN NN Number=Sing _ _ _ _ 8 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 helper helper NOUN NN Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 15 using use VERB VBG VerbForm=Ger _ _ _ _ 16 differential differential ADJ JJ Degree=Pos _ _ _ _ 17 display display NOUN NN Number=Sing _ _ _ _ 18 RT Rt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 PCR PCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 7895 # text = The cDNA contains a 546-nucleotide (nt) open reading frame (ORF) that codes for the carboxyl-terminal 180 amino acids (aa) of the recently identified fkhrl1 gene. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 3 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 546 546 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 -nucleotide -nucleotide NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 nt not PART RB _ _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 open open ADJ JJ Degree=Pos _ _ _ _ 11 reading read NOUN NN Number=Sing _ _ _ _ 12 frame frame NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 ORF ORF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 codes code VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 carboxyl carboxyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 terminal terminal NOUN NN Number=Sing _ _ _ _ 23 180 180 NUM CD NumType=Card _ _ _ _ 24 amino amino NOUN NN Number=Sing _ _ _ _ 25 acids acid NOUN NNS Number=Plur _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 aa aa INTJ UH _ _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 recently recently ADV RB _ _ _ _ _ 32 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 fkhrl1 fkhrl1 NUM CD NumType=Card _ _ _ _ 34 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 7896 # text = This ORF does not contain the characteristic DNA-binding domain found in members of the forkhead protein family. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 ORF Orf NOUN NN Number=Sing _ _ _ _ 3 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 contain contain VERB VB VerbForm=Inf _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 characteristic characteristic ADJ JJ Degree=Pos _ _ _ _ 8 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 binding bind VERB VBG VerbForm=Ger _ _ _ _ 11 domain domain NOUN NN Number=Sing _ _ _ _ 12 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 members member NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 forkhead forkhead NOUN NN Number=Sing _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 7897 # text = In-vitro transcription/translation of this cDNA expressed a protein of approximately 20 kDa. 1 In in ADP IN _ _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 vitro vitro NOUN NN Number=Sing _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 translation translation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 9 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 10 expressed express VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 approximately approximately ADV RB _ _ _ _ _ 15 20 20 NUM CD NumType=Card _ _ _ _ 16 kDa kDa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 7898 # text = We have generated antibodies that specifically immunoprecipitated the in-vitro-translated 20-kDa protein. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 specifically specifically ADV RB _ _ _ _ _ 7 immunoprecipitated immunoprecipitate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 in- in- SYM NFP _ _ _ _ SpaceAfter=No 10 vitro-translated vitro-translated ADJ JJ Degree=Pos _ _ _ _ 11 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kDa kDa NOUN NN Number=Sing _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 7899 # text = This antibody also recognizes in human T lymphocytes a 70-kDa protein corresponding in size to that predicted for the fkhrl1 gene product. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 antibody antibody NOUN NN Number=Sing _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 recognizes recognize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 T T PROPN NNP Number=Sing _ _ _ _ 8 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 70 70 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kDa kDa NOUN NN Number=Sing _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 corresponding correspond VERB VBG VerbForm=Ger _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 size size NOUN NN Number=Sing _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 19 predicted predict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 fkhrl1 fkhrl1 NOUN NN Number=Sing _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 product product NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 7900 # text = The mRNA levels for fkhrl1 is elevated in T helper-induced lymphocytes in comparison to PHA-stimulated T lymphocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 3 levels level NOUN NNS Number=Plur _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 fkhrl1 fkhrl1 NUM CD NumType=Card _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 elevated elevate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 helper helper NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 comparison comparison NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 PHA PHA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 7901 # text = Further characterization of FKHRL1 and its related family members should shed light on the transcriptional mechanisms of this fork head gene subfamily and their role in T helper cell differentiation and regulation of cell growth. 1 Further further ADJ JJ Degree=Pos _ _ _ _ 2 characterization characterization NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 FKHRL1 Fkhrl1 NUM CD NumType=Card _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 7 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 related related ADJ JJ Degree=Pos _ _ _ _ 9 family family NOUN NN Number=Sing _ _ _ _ 10 members member NOUN NNS Number=Plur _ _ _ _ 11 should should AUX MD VerbForm=Fin _ _ _ _ 12 shed shed VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 light light NOUN NN Number=Sing _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 17 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 20 fork fork NOUN NN Number=Sing _ _ _ _ 21 head head NOUN NN Number=Sing _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 subfamily subfamily ADV RB _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 26 role role NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 helper helper NOUN NN Number=Sing _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 regulation regulation NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ _ 36 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7902 # text = Document 0030011260 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011260 0030011260 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7903 # text = The promoter of the CD19 gene is a target for the B-cell-specific transcription factor BSAP. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 promoter promoter NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 19 19 NUM CD NumType=Card _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 target target NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 B- B- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 BSAP Bsap NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7904 # text = The CD19 protein is expressed on the surface of all B-lymphoid cells with the exception of terminally differentiated plasma cells and has been implicated as a signal-transducing receptor in the control of proliferation and differentiation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 19 19 NUM CD NumType=Card _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 surface surface NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 all all DET DT _ _ _ _ _ 12 B b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 exception exception NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 terminally terminally ADV RB _ _ _ _ _ 21 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 plasma plasma NOUN NN Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 27 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 as as ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 transducing transducing VERB VBG VerbForm=Ger _ _ _ _ 33 receptor receptor NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 control control NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 7905 # text = Here we demonstrate complete correlation between the expression pattern of the CD19 gene and the B-cell-specific transcription factor BSAP in a large panel of B-lymphoid cell lines. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 complete complete ADJ JJ Degree=Pos _ _ _ _ 5 correlation correlation NOUN NN Number=Sing _ _ _ _ 6 between between ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 pattern pattern NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 19 19 NUM CD NumType=Card _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 specific specific ADJ JJ Degree=Pos _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 BSAP Bsap NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 large large ADJ JJ Degree=Pos _ _ _ _ 27 panel panel NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 B b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 7906 # text = The human CD19 gene has been cloned, and several BSAP-binding sites have been mapped by in vitro protein-DNA binding studies. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 19 19 NUM CD NumType=Card _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 cloned clon VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 several several ADJ JJ Degree=Pos _ _ _ _ 12 BSAP Bsap NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 binding binding VERB VBG VerbForm=Ger _ _ _ _ 15 sites site NOUN NNS Number=Plur _ _ _ _ 16 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 18 mapped map VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 vitro vitro NUM CD NumType=Card _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 DNA dna NOUN NN Number=Sing _ _ _ _ 25 binding binding VERB VBG VerbForm=Ger _ _ _ _ 26 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 7907 # text = In particular, a high-affinity BSAP-binding site instead of a TATA sequence is located in the -30 promoter region upstream of a cluster of heterogeneous transcription start sites. 1 In in ADP IN _ _ _ _ _ 2 particular particular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 affinity affinity NOUN NN Number=Sing _ _ _ _ 8 BSAP Bsap NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 binding binding VERB VBG VerbForm=Ger _ _ _ _ 11 site site NOUN NN Number=Sing _ _ _ _ 12 instead instead ADV RB _ _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 TATA TATA NOUN NN Number=Sing _ _ _ _ 16 sequence sequence NOUN NN Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 - - SYM SYM _ _ _ _ SpaceAfter=No 22 30 30 NUM CD NumType=Card _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ _ 24 region region NOUN NN Number=Sing _ _ _ _ 25 upstream upstream NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 cluster cluster NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 heterogeneous heterogeneous ADJ JJ Degree=Pos _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ _ 32 start start NOUN NN Number=Sing _ _ _ _ 33 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 7908 # text = Moreover, this site is occupied by BSAP in vivo in a CD19-expressing B-cell line but not in plasma or HeLa cells. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 site site NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 occupied occupy VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 BSAP Bsap NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 vivo vivo NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 CD19 CD19 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 -expressing -expressing NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 line line NOUN NN Number=Sing _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 plasma plasma NOUN NN Number=Sing _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 HeLa Hela NOUN NN Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 7909 # text = This high-affinity site has been conserved in the promoters of both human and mouse CD19 genes and was furthermore shown to confer B-cell specificity to a beta-globin reporter gene in transient transfection experiments. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 affinity affinity NOUN NN Number=Sing _ _ _ _ 5 site site NOUN NN Number=Sing _ _ _ _ 6 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 conserved conserve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 promoters promoter NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 both both DET DT _ _ _ _ _ 14 human human NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 mouse mouse NOUN NN Number=Sing _ _ _ _ 17 CD C NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 19 19 NUM CD NumType=Card _ _ _ _ 19 genes gene NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 furthermore furthermore ADV RB _ _ _ _ _ 23 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 confer confer VERB VB VerbForm=Inf _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 specificity specificity NOUN NN Number=Sing _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 globin globin ADJ JJ Degree=Pos _ _ _ _ 35 reporter reporter NOUN NN Number=Sing _ _ _ _ 36 gene gene NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 transient transient ADJ JJ Degree=Pos _ _ _ _ 39 transfection transfection NOUN NN Number=Sing _ _ _ _ 40 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 7910 # text = In addition, BSAP was found to be the only abundant DNA-binding activity of B-cell nuclear extracts that interacts with the CD19 promoter. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 BSAP BSAP PROPN NNP Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 only only ADJ JJ Degree=Pos _ _ _ _ 11 abundant abundant ADJ JJ Degree=Pos _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 extracts extract NOUN NNS Number=Plur _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 interacts interact VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 19 19 NUM CD NumType=Card _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 7911 # text = Together, this evidence strongly implicates BSAP in the regulation of the CD19 gene. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 evidence evidence NOUN NN Number=Sing _ _ _ _ 5 strongly strongly ADV RB _ _ _ _ _ 6 implicates implicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 BSAP BSAP PROPN NNP Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 regulation regulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 19 19 NUM CD NumType=Card _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7912 # text = Document 0030011261 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011261 0030011261 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7913 # text = Simple derivation of TFIID-dependent RNA polymerase II transcription systems from Schizosaccharomyces pombe and other organisms, and factors required for transcriptional activation. 1 Simple simple ADJ JJ Degree=Pos _ _ _ _ 2 derivation derivation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 TFIID TFIID PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 7 RNA RNa PROPN NNP Number=Sing _ _ _ _ 8 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 9 II ii NUM CD NumType=Card _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 systems system NOUN NNS Number=Plur _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 Schizosaccharomyces Schizosaccharomyce NOUN NNS Number=Plur _ _ _ _ 14 pombe pombe NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 other other ADJ JJ Degree=Pos _ _ _ _ 17 organisms organism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 factors factor NOUN NNS Number=Plur _ _ _ _ 21 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7914 # text = Resolution of whole cell extract through two chromatographic steps yields a single protein fraction requiring only the addition of TFIID for the initiation of transcription at RNA polymerase II promoters. 1 Resolution resolution NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 whole whole ADJ JJ Degree=Pos _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 extract extract NOUN NN Number=Sing _ _ _ _ 6 through through ADP IN _ _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 chromatographic chromatographic ADJ JJ Degree=Pos _ _ _ _ 9 steps step NOUN NNS Number=Plur _ _ _ _ 10 yields yield VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 single single ADJ JJ Degree=Pos _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 fraction fraction NOUN NN Number=Sing _ _ _ _ 15 requiring require VERB VBG VerbForm=Ger _ _ _ _ 16 only only ADV RB _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 addition addition NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 TFIID tFIId PROPN NNP Number=Sing _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 initiation initiation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 at at ADP IN _ _ _ _ _ 27 RNA RNA PROPN NNP Number=Sing _ _ _ _ 28 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 29 II ii NUM CD NumType=Card _ _ _ _ 30 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 7915 # text = This approach allows the convenient generation of RNA polymerase II transcription systems from Saccharomyces cerevisiae, human lymphocytes, and Schizosaccharomyces pombe. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 approach approach NOUN NN Number=Sing _ _ _ _ 3 allows allow VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 convenient convenient ADJ JJ Degree=Pos _ _ _ _ 6 generation generation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 RNA RNA PROPN NNP Number=Sing _ _ _ _ 9 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 10 II ii NUM CD NumType=Card _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 systems system NOUN NNS Number=Plur _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 Saccharomyces Saccharomyce NOUN NNS Number=Plur _ _ _ _ 15 cerevisiae cerevisia NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 Schizosaccharomyces Schizosaccharomyce NOUN NNS Number=Plur _ _ _ _ 22 pombe pombe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 7916 # text = TFIIDs from all three organisms are interchangeable among all three systems. 1 TFIIDs TFIid NOUN NNS Number=Plur _ _ _ _ 2 from from ADP IN _ _ _ _ _ 3 all all DET DT _ _ _ _ _ 4 three three NUM CD NumType=Card _ _ _ _ 5 organisms organism NOUN NNS Number=Plur _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 interchangeable interchangeable ADJ JJ Degree=Pos _ _ _ _ 8 among among ADP IN _ _ _ _ _ 9 all all DET DT _ _ _ _ _ 10 three three NUM CD NumType=Card _ _ _ _ 11 systems system NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 7917 # text = The S. cerevisiae and Sch. pombe systems support effects of acidic activator proteins, provided a further protein fraction from S. cerevisiae is supplied. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 S. S. PROPN NNP Number=Sing _ _ _ _ 3 cerevisiae cerevisia PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 Sch Sch PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 . . PUNCT . _ _ _ _ _ 7 pombe pombe ADJ JJ Degree=Pos _ _ _ _ 8 systems system NOUN NNS Number=Plur _ _ _ _ 9 support support VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 effects effect NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 acidic acidic ADJ JJ Degree=Pos _ _ _ _ 13 activator activator NOUN NN Number=Sing _ _ _ _ 14 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 provided provide VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 further further ADJ JJ Degree=Pos _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 fraction fraction NOUN NN Number=Sing _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 S. S. PROPN NNP Number=Sing _ _ _ _ 23 cerevisiae cerevisiae NOUN NN Number=Sing _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 supplied supply VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 7918 # text = This further fraction is distinct from the mediator of transcriptional activation described previously and represents a second component in addition to general initiation factors that may facilitate a response to acidic activators. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 further further ADJ JJ Degree=Pos _ _ _ _ 3 fraction fraction NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 mediator mediator NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 described describe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 previously previously ADV RB _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 represents represent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 18 component component NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 addition addition NOUN NN Number=Sing _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 general general ADJ JJ Degree=Pos _ _ _ _ 23 initiation initiation NOUN NN Number=Sing _ _ _ _ 24 factors factor NOUN NNS Number=Plur _ _ _ _ 25 that that PRON WDT PronType=Rel _ _ _ _ 26 may may AUX MD VerbForm=Fin _ _ _ _ 27 facilitate facilitate VERB VB VerbForm=Inf _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 response response NOUN NN Number=Sing _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 acidic acidic ADJ JJ Degree=Pos _ _ _ _ 32 activators activator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7919 # text = Document 0030011269 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011269 0030011269 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7920 # text = Hypoxia enhances induction of endothelial ICAM-1: role for metabolic acidosis and proteasomes. 1 Hypoxia Hypoxia PROPN NNP Number=Sing _ _ _ _ 2 enhances enhance VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 induction induction NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 6 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 : : PUNCT : _ _ _ _ _ 10 role role NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 metabolic metabolic ADJ JJ Degree=Pos _ _ _ _ 13 acidosis acidosis NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 proteasomes proteasome NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7921 # text = Intercellular adhesion molecule 1 (ICAM-1) is an important molecule in promotion of polymorphonuclear neutrophil transendothelial migration during inflammation. 1 Intercellular Intercelular ADJ JJ Degree=Pos _ _ _ _ 2 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 3 molecule molecule NOUN NN Number=Sing _ _ _ _ 4 1 1 NUM CD NumType=Card _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 X LS _ _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 important important ADJ JJ Degree=Pos _ _ _ _ 13 molecule molecule NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 promotion promotion NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 polymorphonuclear polymorphonuclear ADJ JJ Degree=Pos _ _ _ _ 18 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 19 transendothelial transendothelial ADJ JJ Degree=Pos _ _ _ _ 20 migration migration NOUN NN Number=Sing _ _ _ _ 21 during during ADP IN _ _ _ _ _ 22 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 7922 # text = Coincident with many inflammatory diseases is tissue hypoxia. 1 Coincident Coincident NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 many many ADJ JJ Degree=Pos _ _ _ _ 4 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 5 diseases diseasis NOUN NNS Number=Plur _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 tissue tissue NOUN NN Number=Sing _ _ _ _ 8 hypoxia hypoxia NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 7923 # text = Thus we hypothesized that combinations of hypoxia and inflammatory stimuli may differentially regulate expression of endothelial ICAM-1. 1 Thus thus ADV RB _ _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 hypothesized hypothesize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 combinations combination NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 hypoxia hypoxia NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 10 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 11 may may AUX MD VerbForm=Fin _ _ _ _ 12 differentially differentially ADV RB _ _ _ _ _ 13 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 17 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 7924 # text = Human endothelial cells were exposed to hypoxia in the presence or absence of added lipopolysaccharide (LPS) and examined for expression of functional ICAM-1. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 exposed expose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 hypoxia hypoxia NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 presence presence NOUN NN Number=Sing _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 absence absence NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 added add VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 functional functional ADJ JJ Degree=Pos _ _ _ _ 25 ICAM ICAM NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 7925 # text = Although hypoxia alone did not induce ICAM-1, the combination of LPS and hypoxia enhanced (3 +/- 0.4-fold over normoxia) ICAM-1 expression. 1 Although although SCONJ IN _ _ _ _ _ 2 hypoxia hypoxia NOUN NNS Number=Plur _ _ _ _ 3 alone alone ADV RB _ _ _ _ _ 4 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 induce induce VERB VB VerbForm=Inf _ _ _ _ 7 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 combination combination NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 LPS Lp NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 hypoxia hypoxia NOUN NN Number=Sing _ _ _ _ 17 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 3 3 NUM CD NumType=Card _ _ _ _ 20 +/- +/- SYM SYM _ _ _ _ _ 21 0.4 0.4 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 fold fold NOUN NN Number=Sing _ _ _ _ 24 over over ADP IN _ _ _ _ _ 25 normoxia normoxia NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 7926 # text = Combinations of hypoxia and LPS significantly increased lymphocyte binding, and such increases were inhibited by addition of anti-ICAM-1 antibodies or antisense oligonucleotides. 1 Combinations Combination NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 hypoxia hypoxia NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 LPS LPS PROPN NNP Number=Sing _ _ _ _ 6 significantly significantly ADV RB _ _ _ _ _ 7 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 such such ADJ JJ Degree=Pos _ _ _ _ 13 increases increase NOUN NNS Number=Plur _ _ _ _ 14 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 addition addition NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 anti-ICAM anti-icam NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - SYM SYM _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 antisense antisense NOUN NN Number=Sing _ _ _ _ 25 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 7927 # text = Hypoxic endothelia showed a > 10-fold increase in sensitivity to inhibitors of proteasome activation, and combinations of hypoxia and LPS enhanced proteasome-dependent cytoplasmic-to-nuclear localization of the nuclear transcription factor-kappa B p65 (Rel A) subunit. 1 Hypoxic Hypoxic ADJ JJ Degree=Pos _ _ _ _ 2 endothelia endothelia NOUN NN Number=Sing _ _ _ _ 3 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 > > SYM $ _ _ _ _ _ 6 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 fold fold NOUN NN Number=Sing _ _ _ _ 9 increase increase NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 proteasome proteasome DET DT _ _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 combinations combination NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 hypoxia hypoxia NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 LPS LPS NOUN NNS Number=Plur _ _ _ _ 24 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 proteasome proteasome ADV RB _ _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 28 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 to to ADP IN _ _ _ _ SpaceAfter=No 31 -nuclear -nuclear ADJ JJ Degree=Pos _ _ _ _ 32 localization localization NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 36 transcription transcription NOUN NN Number=Sing _ _ _ _ 37 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 kappa kappa NOUN NN Number=Sing _ _ _ _ 40 B b NOUN NN Number=Sing _ _ _ _ 41 p65 p65 NUM CD NumType=Card _ _ _ _ 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 Rel Rel NOUN NN Number=Sing _ _ _ _ 44 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ _ 46 subunit subunit NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 7928 # text = Such proteasome activation correlated with hypoxia-evoked decreases in both extracellular and intracellular pH. 1 Such such DET PDT _ _ _ _ _ 2 proteasome proteasome ADJ JJ Degree=Pos _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 hypoxia hypoxia NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 evoked evok VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 decreases decrease NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 both both CCONJ CC _ _ _ _ _ 12 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 15 pH ph NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 7929 # text = We conclude from these studies that endothelial hypoxia provides a novel, proteasome-dependent stimulus for ICAM-1 induction. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 studies study NOUN NNS Number=Plur _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 8 hypoxia hypoxia NOUN NN Number=Sing _ _ _ _ 9 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 novel novel NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 proteasome proteasome ADV RB _ _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 16 stimulus stimulus NOUN NN Number=Sing _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 ICAM ICAM NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - SYM SYM _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7930 # text = Document 0030011270 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011270 0030011270 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7931 # text = Expression of c-fos correlates with IFN-alpha responsiveness in Philadelphia chromosome positive chronic myelogenous leukemia. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 fos fo VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 correlates correlate NOUN NNS Number=Plur _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 Philadelphia Philadelphia PROPN NNP Number=Sing _ _ _ _ 14 chromosome chromosome PROPN NNP Number=Sing _ _ _ _ 15 positive positive ADJ JJ Degree=Pos _ _ _ _ 16 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 17 myelogenous myelogenous ADJ JJ Degree=Pos _ _ _ _ 18 leukemia leukemion NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7932 # text = This study evaluates (i) constitutive levels of oncogene and p53 transcripts in chronic phase CML patients and (ii) their modulations subsequent to in vivo therapy with rIFN-alpha 2c. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 evaluates evaluate NOUN NNS Number=Plur _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 i i PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 oncogene oncogene NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 p53 p53 NOUN NN Number=Sing _ _ _ _ 13 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 16 phase phase NOUN NN Number=Sing _ _ _ _ 17 CML cml NOUN NN Number=Sing _ _ _ _ 18 patients patient NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 ii ii X LS _ _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 modulations modulation NOUN NNS Number=Plur _ _ _ _ 25 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 vivo vivo NOUN NN Number=Sing _ _ _ _ 29 therapy therapy NOUN NN Number=Sing _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 rIFN rIFN NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 alpha alpha NOUN NN Number=Sing _ _ _ _ 34 2c 2c NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 7933 # text = Peripheral blood mononuclear cells (pbmc) and bone marrow cells of 26 patients were examined for c-fos, c-myc, p53 and the hybrid bcr/abl mRNA levels. 1 Peripheral Peripheral ADJ JJ Degree=Pos _ _ _ _ 2 blood blood NOUN NN Number=Sing _ _ _ _ 3 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 pbmc pbmc NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 bone bone PRON NN Number=Sing _ _ _ _ 10 marrow marrow ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 26 26 NUM CD NumType=Card _ _ _ _ 14 patients patient NOUN NNS Number=Plur _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 c- c- PUNCT : _ _ _ _ SpaceAfter=No 19 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 c-myc c-myc NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 p53 p53 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 hybrid hybrid NOUN NN Number=Sing _ _ _ _ 27 bcr/ bcr/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 28 abl abl ADJ JJ Degree=Pos _ _ _ _ 29 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 30 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 7934 # text = Results indicated that (i) constitutive c-fos transcript levels are significantly higher in patients subsequently responding to IFN-alpha therapy (p < 0.01) and positively correlated with the proportion of lymphocytes (r = 0.6895, p < 0.01) and negatively with the proportion of immature cells (r = -0.568, p < 0.01) contained in the pbmc preparations tested, (ii) constitutive mRNA levels of the hybrid bcr/abl, c-myc and p53 are positively correlated with each other, but failed to relate to disease parameters, and (iii) acute and chronic in vivo exposure to IFN-alpha is accompanied by upregulation of c-fos and downregulation of c-myc mRNA levels in responder patients. 1 Results result NOUN NNS Number=Plur _ _ _ _ 2 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 i i PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 8 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 fos fo NOUN NNS Number=Plur _ _ _ _ 11 transcript transcript VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 levels level NOUN NNS Number=Plur _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 significantly significantly ADV RB _ _ _ _ _ 15 higher higher ADJ JJR Degree=Cmp _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 patients patient NOUN NNS Number=Plur _ _ _ _ 18 subsequently subsequently ADV RB _ _ _ _ _ 19 responding respond VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 therapy therapy NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 p p NOUN NN Number=Sing _ _ _ _ 27 < < PUNCT -LRB- _ _ _ _ _ 28 0.01 0.01 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 positively positively ADV RB _ _ _ _ _ 32 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 proportion proportion NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 r be NOUN NN Number=Sing _ _ _ _ 40 = = SYM SYM _ _ _ _ _ 41 0.6895 0.6895 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 p p NOUN NN Number=Sing _ _ _ _ 44 < < PUNCT -LRB- _ _ _ _ _ 45 0.01 0.01 NUM CD NumType=Card _ _ _ SpaceAfter=No 46 ) ) PUNCT -RRB- _ _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 negatively negatively ADV RB _ _ _ _ _ 49 with with ADP IN _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 proportion proportion NOUN NN Number=Sing _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 immature immature ADJ JJ Degree=Pos _ _ _ _ 54 cells cell NOUN NNS Number=Plur _ _ _ _ 55 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 56 r be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 57 = = SYM SYM _ _ _ _ _ 58 - - SYM SYM _ _ _ _ SpaceAfter=No 59 0.568 0.568 NUM CD NumType=Card _ _ _ SpaceAfter=No 60 , , PUNCT , _ _ _ _ _ 61 p p NOUN NN Number=Sing _ _ _ _ 62 < < PUNCT -LRB- _ _ _ _ _ 63 0.01 0.01 NUM CD NumType=Card _ _ _ SpaceAfter=No 64 ) ) PUNCT -RRB- _ _ _ _ _ 65 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 66 in in ADP IN _ _ _ _ _ 67 the the DET DT Definite=Def|PronType=Art _ _ _ _ 68 pbmc pbmc NOUN NN Number=Sing _ _ _ _ 69 preparations preparation NOUN NNS Number=Plur _ _ _ _ 70 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 71 , , PUNCT , _ _ _ _ _ 72 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 73 ii ii X LS _ _ _ _ SpaceAfter=No 74 ) ) PUNCT -RRB- _ _ _ _ _ 75 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 76 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 77 levels level NOUN NNS Number=Plur _ _ _ _ 78 of of ADP IN _ _ _ _ _ 79 the the DET DT Definite=Def|PronType=Art _ _ _ _ 80 hybrid hybrid NOUN NN Number=Sing _ _ _ _ 81 bcr/ bcr/ PUNCT HYPH _ _ _ _ SpaceAfter=No 82 abl abl NOUN NN Number=Sing _ _ _ SpaceAfter=No 83 , , PUNCT , _ _ _ _ _ 84 c-myc c-myc NOUN NN Number=Sing _ _ _ _ 85 and and CCONJ CC _ _ _ _ _ 86 p53 p53 NOUN NN Number=Sing _ _ _ _ 87 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 88 positively positively ADV RB _ _ _ _ _ 89 correlated correlate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 90 with with ADP IN _ _ _ _ _ 91 each each DET DT _ _ _ _ _ 92 other other ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 93 , , PUNCT , _ _ _ _ _ 94 but but CCONJ CC _ _ _ _ _ 95 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 96 to to PART TO _ _ _ _ _ 97 relate relate VERB VB VerbForm=Inf _ _ _ _ 98 to to ADP IN _ _ _ _ _ 99 disease disease NOUN NN Number=Sing _ _ _ _ 100 parameters parameter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 101 , , PUNCT , _ _ _ _ _ 102 and and CCONJ CC _ _ _ _ _ 103 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 104 iii iii X LS _ _ _ _ SpaceAfter=No 105 ) ) PUNCT -RRB- _ _ _ _ _ 106 acute acute ADJ JJ Degree=Pos _ _ _ _ 107 and and CCONJ CC _ _ _ _ _ 108 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 109 in in ADP IN _ _ _ _ _ 110 vivo vivo ADJ JJ Degree=Pos _ _ _ _ 111 exposure exposure NOUN NN Number=Sing _ _ _ _ 112 to to ADP IN _ _ _ _ _ 113 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 114 - - PUNCT , _ _ _ _ SpaceAfter=No 115 alpha alpha NOUN NN Number=Sing _ _ _ _ 116 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 117 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 118 by by ADP IN _ _ _ _ _ 119 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 120 of of ADP IN _ _ _ _ _ 121 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 122 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 123 fos fo NOUN NNS Number=Plur _ _ _ _ 124 and and CCONJ CC _ _ _ _ _ 125 downregulation downregulation NOUN NN Number=Sing _ _ _ _ 126 of of ADP IN _ _ _ _ _ 127 c- c- SYM NFP _ _ _ _ SpaceAfter=No 128 myc myc ADJ JJ Degree=Pos _ _ _ _ 129 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 130 levels level NOUN NNS Number=Plur _ _ _ _ 131 in in ADP IN _ _ _ _ _ 132 responder responder NOUN NN Number=Sing _ _ _ _ 133 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 134 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7935 # text = Document 0030011271 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011271 0030011271 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7936 # text = IL-4 down-regulates IL-2-, IL-3-, and GM-CSF-induced cytokine gene expression in peripheral blood monocytes. 1 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT NFP _ _ _ _ SpaceAfter=No 3 4 4 X GW _ _ _ _ _ 4 down down X GW _ _ _ _ SpaceAfter=No 5 - - X GW _ _ _ _ SpaceAfter=No 6 regulates regulate X GW _ _ _ _ _ 7 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 28 blood blood NOUN NN Number=Sing _ _ _ _ 29 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7937 # text = IL-4, a product of the T-helper 0 (Th0) and 2 (Th2) subset, was originally described as a B-cell stimulatory factor and has subsequently been found to suppress IL-1 alpha, IL-1 beta, IL-6, IL-8, and TNF-alpha gene expression in monocytes stimulated with LPS, and to upregulate IL-1 receptor antagonist (IL1-RA) gene expression. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 product product NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 helper helper NOUN NN Number=Sing _ _ _ _ 11 0 0 NUM CD NumType=Card _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 Th0 Th0 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 2 2 NUM CD NumType=Card _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 Th2 Th2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 subset subset NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 originally originally ADV RB _ _ _ _ _ 24 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 as as ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 stimulatory stimulatory NOUN NN Number=Sing _ _ _ _ 31 factor factor NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 subsequently subsequently ADV RB _ _ _ _ _ 35 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 36 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 to to PART TO _ _ _ _ _ 38 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 39 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 1 1 NUM CD NumType=Card _ _ _ _ 42 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 1 1 NUM CD NumType=Card _ _ _ _ 47 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 - - SYM SYM _ _ _ _ SpaceAfter=No 51 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 IL il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 56 , , PUNCT , _ _ _ _ _ 57 and and CCONJ CC _ _ _ _ _ 58 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 60 alpha alpha NOUN NN Number=Sing _ _ _ _ 61 gene gene NOUN NN Number=Sing _ _ _ _ 62 expression expression NOUN NN Number=Sing _ _ _ _ 63 in in ADP IN _ _ _ _ _ 64 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 65 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 66 with with ADP IN _ _ _ _ _ 67 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 68 , , PUNCT , _ _ _ _ _ 69 and and CCONJ CC _ _ _ _ _ 70 to to ADP IN _ _ _ _ _ 71 upregulate upregulate ADJ JJ Degree=Pos _ _ _ _ 72 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 73 - - PUNCT , _ _ _ _ SpaceAfter=No 74 1 1 NUM CD NumType=Card _ _ _ _ 75 receptor receptor NOUN NN Number=Sing _ _ _ _ 76 antagonist antagonist NOUN NN Number=Sing _ _ _ _ 77 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 78 IL1 Il1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 79 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 80 RA Ra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 81 ) ) PUNCT -RRB- _ _ _ _ _ 82 gene gene ADJ JJ Degree=Pos _ _ _ _ 83 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 84 . . PUNCT . _ _ _ _ _ # sent_id = 7938 # text = In this study we investigated the effect of IL-4 on the expression of cytokine genes in monocytes evoked by other T-helper cell cytokines: IL-2, IL-3, and GM-CSF. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 effect effect NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 4 4 NUM CD NumType=Card _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 20 evoked evok VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 other other ADJ JJ Degree=Pos _ _ _ _ 23 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 helper helper NOUN NN Number=Sing _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 : : PUNCT : _ _ _ _ _ 28 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 -2 -2 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 7939 # text = IL-4 down-regulated mRNA accumulation of the proinflammatory cytokines IL-1 beta, IL-8, and TNF-alpha in monocytes stimulated with IL-2, IL-3, and GM-CSF. 1 IL Il SYM $ _ _ _ _ SpaceAfter=No 2 - - SYM SYM _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ _ 4 down down ADV RB _ _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 8 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 12 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 alpha alpha NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 28 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 7940 # text = IL-4 also suppressed the IL-2-induced IL-6 mRNA expression. 1 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - SYM SYM _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 6 6 NUM CD NumType=Card _ _ _ _ 15 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 7941 # text = Temporal analysis of the IL-4 down-regulatory effect on the IL-2-, IL-3-, or GM-CSF-induced proinflammatory cytokine gene expression in monocytes provided evidence that IL-4 acts predominantly on the post-transcriptional level. 1 Temporal Temporal ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 4 4 NUM CD NumType=Card _ _ _ _ 8 down down ADV RB _ _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 11 effect effect NOUN NN Number=Sing _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 31 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 32 gene gene NOUN NN Number=Sing _ _ _ _ 33 expression expression NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 36 provided provide VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 evidence evidence NOUN NN Number=Sing _ _ _ _ 38 that that PRON WDT PronType=Rel _ _ _ _ 39 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - SYM SYM _ _ _ _ SpaceAfter=No 41 4 4 NUM CD NumType=Card _ _ _ _ 42 acts acts NOUN NNS Number=Plur _ _ _ _ 43 predominantly predominantly ADV RB _ _ _ _ _ 44 on on ADP IN _ _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 post post X AFX _ _ _ _ SpaceAfter=No 47 -transcriptional -transcriptional ADJ JJ Degree=Pos _ _ _ _ 48 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 7942 # text = This was supported by the observation that the down-regulatory capacity of IL-4 appeared to be dependent on de novo protein synthesis. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 supported support VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 observation observation NOUN NN Number=Sing _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 down down ADV RB _ _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 12 capacity capacity NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 4 4 NUM CD NumType=Card _ _ _ _ 17 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 21 on on ADP IN _ _ _ _ _ 22 de de NOUN NN Number=Sing _ _ _ _ 23 novo novo NOUN NN Number=Sing _ _ _ _ 24 protein protein NOUN NN Number=Sing _ _ _ _ 25 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 7943 # text = IL-4 did not exert significant influence on the induction of expression of IL-1-RA or various CSFs by IL-2, IL-3, and GM-CSF. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ _ 4 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 exert exert VERB VB VerbForm=Inf _ _ _ _ 7 significant significant ADJ JJ Degree=Pos _ _ _ _ 8 influence influence NOUN NN Number=Sing _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 induction induction NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 RA Ra NOUN NN Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 various various ADJ JJ Degree=Pos _ _ _ _ 22 CSFs CSF NOUN NNS Number=Plur _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 7944 # text = (ABSTRACT TRUNCATED AT 250 WORDS) 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 ABSTRACT ABSTRACT X GW _ _ _ _ _ 3 TRUNCATED Truncate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 AT at ADV RB _ _ _ _ _ 5 250 250 NUM CD NumType=Card _ _ _ _ 6 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7945 # text = Document 0030011272 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011272 0030011272 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7946 # text = I kappa B/MAD-3 masks the nuclear localization signal of NF-kappa B p65 and requires the transactivation domain to inhibit NF-kappa B p65 DNA binding. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa PROPN NNP Number=Sing _ _ _ _ 3 B benefit PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 / / PUNCT , _ _ _ _ SpaceAfter=No 5 MAD mad PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 3 3 NUM CD NumType=Card _ _ _ _ 8 masks mask NOUN NNS Number=Plur _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 localization localization NOUN NN Number=Sing _ _ _ _ 12 signal signal NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 p65 p65 NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 23 domain domain NOUN NN Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 26 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 p65 p65 NOUN NN Number=Sing _ _ _ _ 31 DNA dna NOUN NN Number=Sing _ _ _ _ 32 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7947 # text = The active nuclear form of the NF-kappa B transcription factor complex is composed of two DNA binding subunits, NF-kappa B p65 and NF-kappa B p50, both of which share extensive N-terminal sequence homology with the v-rel oncogene product. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 active active ADJ JJ Degree=Pos _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 form form NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 complex complex NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 two two NUM CD NumType=Card _ _ _ _ 18 DNA dna NOUN NN Number=Sing _ _ _ _ 19 binding binding VERB VBG VerbForm=Ger _ _ _ _ 20 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ _ 26 p65 p65 NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappa kappa NOUN NN Number=Sing _ _ _ _ 31 B b NOUN NN Number=Sing _ _ _ _ 32 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 both both CCONJ CC _ _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 which which DET WDT PronType=Int _ _ _ _ 37 share share NOUN NN Number=Sing _ _ _ _ 38 extensive extensive ADJ JJ Degree=Pos _ _ _ _ 39 N- N- PUNCT , _ _ _ _ SpaceAfter=No 40 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 41 sequence sequence NOUN NN Number=Sing _ _ _ _ 42 homology homology NOUN NN Number=Sing _ _ _ _ 43 with with ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 v- v- SYM NFP _ _ _ _ SpaceAfter=No 46 rel rel ADJ JJ Degree=Pos _ _ _ _ 47 oncogene oncogene ADJ JJ Degree=Pos _ _ _ _ 48 product product NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 7948 # text = The NF-kappa B p65 subunit provides the transactivation activity in this complex and serves as an intracellular receptor for a cytoplasmic inhibitor of NF-kappa B, termed I kappa B. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 p65 p65 NUM CD NumType=Card _ _ _ _ 7 subunit subunit NOUN NN Number=Sing _ _ _ _ 8 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 14 complex complex NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 serves serve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 24 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa PROPN NNP Number=Sing _ _ _ _ 29 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 33 kappa kappa PROPN NNP Number=Sing _ _ _ _ 34 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 7949 # text = In contrast, NF-kappa B p50 alone fails to stimulate kappa B-directed transcription, and based on prior in vitro studies, is not directly regulated by I kappa B. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B b PROPN NNP Number=Sing _ _ _ _ 8 p50 p50 NUM CD NumType=Card _ _ _ _ 9 alone alone ADJ JJ Degree=Pos _ _ _ _ 10 fails fail NOUN NNS Number=Plur _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 on on ADP IN _ _ _ _ _ 22 prior prior ADJ JJ Degree=Pos _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 25 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 not not PART RB _ _ _ _ _ 29 directly directly ADV RB _ _ _ _ _ 30 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 33 kappa kappa PROPN NNP Number=Sing _ _ _ _ 34 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 7950 # text = To investigate the molecular basis for the critical regulatory interaction between NF-kappa B and I kappa B/MAD-3, a series of human NF-kappa B p65 mutants was identified that functionally segregated DNA binding, I kappa B-mediated inhibition, and I kappa B-induced nuclear exclusion of this transcription factor. 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 5 basis basis NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 critical critical ADJ JJ Degree=Pos _ _ _ _ 9 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 10 interaction interaction NOUN NN Number=Sing _ _ _ _ 11 between between ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa PROPN NNP Number=Sing _ _ _ _ 15 B b PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 MAD mad NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 series series NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappa kappa NOUN NN Number=Sing _ _ _ _ 32 B b NOUN NN Number=Sing _ _ _ _ 33 p65 p65 NUM CD NumType=Card _ _ _ _ 34 mutants mutant NOUN NNS Number=Plur _ _ _ _ 35 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 36 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 that that SCONJ IN _ _ _ _ _ 38 functionally functionally ADV RB _ _ _ _ _ 39 segregated segregate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 DNA dna NOUN NN Number=Sing _ _ _ _ 41 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 44 kappa kappa PROPN NNP Number=Sing _ _ _ _ 45 B- B- SYM NFP _ _ _ _ SpaceAfter=No 46 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 inhibition inhibition NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 51 kappa kappa PROPN NNP Number=Sing _ _ _ _ 52 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 54 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 55 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 56 exclusion exclusion NOUN NN Number=Sing _ _ _ _ 57 of of ADP IN _ _ _ _ _ 58 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 59 transcription transcription NOUN NN Number=Sing _ _ _ _ 60 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ _ # sent_id = 7951 # text = Results from in vivo expression studies performed with these NF-kappa B p65 mutants revealed the following: 1 Results result NOUN NNS Number=Plur _ _ _ _ 2 from from ADP IN _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 vivo vivo NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 studies study NOUN NNS Number=Plur _ _ _ _ 7 performed perform VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 10 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 p65 p65 NUM CD NumType=Card _ _ _ _ 15 mutants mutant NOUN NNS Number=Plur _ _ _ _ 16 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 following follow VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 19 : : PUNCT : _ _ _ _ _ # sent_id = 7952 # text = 1) I kappa B/MAD-3 completely inhibits NF-kappa B p65-dependent transcriptional activation mediated through the human immunodeficiency virus type 1 kappa 1 1 1 X LS _ _ _ _ SpaceAfter=No 2 ) ) PUNCT -RRB- _ _ _ _ _ 3 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 4 kappa kappa PROPN NNP Number=Sing _ _ _ _ 5 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 /MAD /MAD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 3 3 NUM CD NumType=Card _ _ _ _ 9 completely completely ADV RB _ _ _ _ _ 10 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 -dependent -dependent ADJ JJ Degree=Pos _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 through through ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 24 virus virus NOUN NN Number=Sing _ _ _ _ 25 type type NOUN NN Number=Sing _ _ _ _ 26 1 1 NUM CD NumType=Card _ _ _ _ 27 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 7953 # text = B enhancer in human T lymphocytes, 2) the binding of I kappa B/MAD-3 to NF-kappa B p65 is sufficient to retarget NF-kappa B p65 from the nucleus to the cytoplasm, 3) selective deletion of the functional nuclear localization signal present in the Rel homology domain of NF-kappa B p65 disrupts its ability to engage I kappa B/MAD-3, and 4) the unique C-terminus of NF-kappa B p65 attenuates its own nuclear localization and contains sequences that are required for I kappa B-mediated inhibition of NF-kappa B p65 DNA binding activity. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 2 2 X LS _ _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 binding binding NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 14 kappa kappa PROPN NNP Number=Sing _ _ _ _ 15 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 /MAD /MAD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 3 3 NUM CD NumType=Card _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappa kappa NOUN NN Number=Sing _ _ _ _ 23 B b NOUN NN Number=Sing _ _ _ _ 24 p65 p65 NOUN NN Number=Sing _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 retarget retarget VERB VB VerbForm=Inf _ _ _ _ 29 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappa kappa NOUN NN Number=Sing _ _ _ _ 32 B b NOUN NN Number=Sing _ _ _ _ 33 p65 p65 NOUN NN Number=Sing _ _ _ _ 34 from from ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 3 3 X LS _ _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 selective selective ADJ JJ Degree=Pos _ _ _ _ 44 deletion deletion NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 functional functional ADJ JJ Degree=Pos _ _ _ _ 48 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 49 localization localization NOUN NN Number=Sing _ _ _ _ 50 signal signal NOUN NN Number=Sing _ _ _ _ 51 present present ADJ JJ Degree=Pos _ _ _ _ 52 in in ADP IN _ _ _ _ _ 53 the the DET DT Definite=Def|PronType=Art _ _ _ _ 54 Rel Rel PROPN NNP Number=Sing _ _ _ _ 55 homology homology NOUN NN Number=Sing _ _ _ _ 56 domain domain NOUN NN Number=Sing _ _ _ _ 57 of of ADP IN _ _ _ _ _ 58 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 59 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 60 kappa kappa NOUN NN Number=Sing _ _ _ _ 61 B b NOUN NN Number=Sing _ _ _ _ 62 p65 p65 NOUN NN Number=Sing _ _ _ _ 63 disrupts disrupt VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 64 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 65 ability ability NOUN NN Number=Sing _ _ _ _ 66 to to PART TO _ _ _ _ _ 67 engage engage VERB VB VerbForm=Inf _ _ _ _ 68 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 69 kappa kappa PROPN NNP Number=Sing _ _ _ _ 70 B benefit PROPN NNP Number=Sing _ _ _ SpaceAfter=No 71 / / PUNCT , _ _ _ _ SpaceAfter=No 72 MAD mad PROPN NNP Number=Sing _ _ _ SpaceAfter=No 73 -3 -3 NUM CD NumType=Card _ _ _ SpaceAfter=No 74 , , PUNCT , _ _ _ _ _ 75 and and CCONJ CC _ _ _ _ _ 76 4 4 X LS _ _ _ _ SpaceAfter=No 77 ) ) PUNCT -RRB- _ _ _ _ _ 78 the the DET DT Definite=Def|PronType=Art _ _ _ _ 79 unique unique ADJ JJ Degree=Pos _ _ _ _ 80 C c NOUN NN Number=Sing _ _ _ SpaceAfter=No 81 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 82 terminus terminus NOUN NN Number=Sing _ _ _ _ 83 of of ADP IN _ _ _ _ _ 84 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 85 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 86 kappa kappa NOUN NN Number=Sing _ _ _ _ 87 B b NOUN NN Number=Sing _ _ _ _ 88 p65 p65 NOUN NN Number=Sing _ _ _ _ 89 attenuates attenuate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 90 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 91 own own ADJ JJ Degree=Pos _ _ _ _ 92 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 93 localization localization NOUN NN Number=Sing _ _ _ _ 94 and and CCONJ CC _ _ _ _ _ 95 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 96 sequences sequence NOUN NNS Number=Plur _ _ _ _ 97 that that PRON WDT PronType=Rel _ _ _ _ 98 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 99 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 100 for for SCONJ IN _ _ _ _ _ 101 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 102 kappa kappa ADV RB _ _ _ _ _ 103 B- B- PUNCT : _ _ _ _ SpaceAfter=No 104 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 105 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 106 of of ADP IN _ _ _ _ _ 107 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 108 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 109 kappa kappa NOUN NN Number=Sing _ _ _ _ 110 B b NOUN NN Number=Sing _ _ _ _ 111 p65 p65 NOUN NN Number=Sing _ _ _ _ 112 DNA dna NOUN NN Number=Sing _ _ _ _ 113 binding binding VERB VBG VerbForm=Ger _ _ _ _ 114 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 115 . . PUNCT . _ _ _ _ _ # sent_id = 7954 # text = Together, these findings suggest that the nuclear localization signal and transactivation domain of NF-kappa B p65 constitute a bipartite system that is critically involved in the inhibitory function of I kappa B/MAD-3. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 findings finding NOUN NNS Number=Plur _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 localization localization NOUN NN Number=Sing _ _ _ _ 10 signal signal NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 13 domain domain NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 p65 p65 NUM CD NumType=Card _ _ _ _ 20 constitute constitute NOUN NN Number=Sing _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 bipartite bipartite ADJ JJ Degree=Pos _ _ _ _ 23 system system NOUN NN Number=Sing _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 critically critically ADV RB _ _ _ _ _ 27 involved involved ADJ JJ Degree=Pos _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 31 function function NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 34 kappa kappa PROPN NNP Number=Sing _ _ _ _ 35 B benefit PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 / / PUNCT , _ _ _ _ SpaceAfter=No 37 MAD mad PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - SYM SYM _ _ _ _ SpaceAfter=No 39 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 7955 # text = Unexpectedly, our in vivo studies also demonstrate that I kappa B/MAD-3 binds directly to NF-kappa B p50. 1 Unexpectedly unexpectedly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 vivo vivo NOUN NN Number=Sing _ _ _ _ 6 studies study NOUN NNS Number=Plur _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 kappa kappa PROPN NNP Number=Sing _ _ _ _ 12 B benefit PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 /MAD /mad PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 3 3 NUM CD NumType=Card _ _ _ _ 16 binds bind NOUN NNS Number=Plur _ _ _ _ 17 directly directly ADV RB _ _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa PROPN NNP Number=Sing _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ _ 23 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 7956 # text = This interaction is functional as it leads to retargeting of NF-kappa B p50 from the nucleus to the cytoplasm. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 interaction interaction NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 functional functional ADJ JJ Degree=Pos _ _ _ _ 5 as as SCONJ IN _ _ _ _ _ 6 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 7 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 to to SCONJ IN _ _ _ _ _ 9 retargeting retarget VERB VBG VerbForm=Ger _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ 14 B b PROPN NNP Number=Sing _ _ _ _ 15 p50 p50 NUM CD NumType=Card _ _ _ _ 16 from from ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 7957 # text = However, no loss of DNA binding activity is observed, presumably reflecting the unique C-terminal domain that is distinct from that present in NF-kappa B p65. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 no no DET DT _ _ _ _ _ 4 loss loss NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ _ 7 binding binding VERB VBG VerbForm=Ger _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 presumably presumably ADV RB _ _ _ _ _ 13 reflecting reflect VERB VBG VerbForm=Ger _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 unique unique ADJ JJ Degree=Pos _ _ _ _ 16 C- C- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 terminal terminal NOUN NN Number=Sing _ _ _ _ 18 domain domain NOUN NN Number=Sing _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 24 present present NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa PROPN NNP Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7958 # text = Document 0030011273 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011273 0030011273 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7959 # text = Evaluation of the role of ligand and thermal activation of specific DNA binding by in vitro synthesized human glucocorticoid receptor. 1 Evaluation evaluation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 ligand ligand NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 thermal thermal ADJ JJ Degree=Pos _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 specific specific ADJ JJ Degree=Pos _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 vitro vitro PROPN NNP Number=Sing _ _ _ _ 17 synthesized synthesize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7960 # text = We have used a DNA-binding/immunoprecipitation assay to analyze the capacity of human glucocorticoid receptor (hGR), generated in rabbit reticulocyte lysates, to bind DNA. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 DNA- Dna- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 immunoprecipitation immunoprecipitation NOUN NN Number=Sing _ _ _ _ 9 assay assay NOUN NN Number=Sing _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 analyze analyze VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 capacity capacity NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 hGR hgr NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 rabbit rabbit NOUN NN Number=Sing _ _ _ _ 25 reticulocyte reticulocyte NOUN NN Number=Sing _ _ _ _ 26 lysates lysate NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 to to PART TO _ _ _ _ _ 29 bind bind VERB VB VerbForm=Inf _ _ _ _ 30 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 7961 # text = In vitro translated hGR was indistinguishable from native hGR, as determined by migration on sodium dodecyl sulfate-polyacrylamide gels, sedimentation on sucrose density gradients, and reactivity with antipeptide antibodies generated against hGR. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro ADP IN Typo=Yes _ _ _ _ 3 translated translate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 hGR hgr NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 indistinguishable indistinguishable ADJ JJ Degree=Pos _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 native native ADJ JJ Degree=Pos _ _ _ _ 9 hGR hgr NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 as as SCONJ IN _ _ _ _ _ 12 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 migration migration NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 sodium sodium NOUN NN Number=Sing _ _ _ _ 17 dodecyl dodecyl NOUN NN Number=Sing _ _ _ _ 18 sulfate sulfate NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 polyacrylamide polyacrylamide NOUN NN Number=Sing _ _ _ _ 21 gels gel NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 sedimentation sedimentation NOUN NN Number=Sing _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 sucrose sucrose DET DT Number=Plur|PronType=Dem _ _ _ _ 26 density density NOUN NN Number=Sing _ _ _ _ 27 gradients gradient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 reactivity reactivity NOUN NN Number=Sing _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 antipeptide antipeptide ADJ JJ Degree=Pos _ _ _ _ 33 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 34 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 against against ADP IN _ _ _ _ _ 36 hGR hGR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 7962 # text = In addition, cell-free synthesized hGR was capable of specific binding to glucocorticoid response element (GRE)-containing DNA fragments. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 free free ADJ JJ Degree=Pos _ _ _ _ 7 synthesized synthesized ADJ JJ Degree=Pos _ _ _ _ 8 hGR hgr NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 capable capable ADJ JJ Degree=Pos _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 glucocorticoid glucocorticoid VERB VB VerbForm=Inf _ _ _ _ 16 response response NOUN NN Number=Sing _ _ _ _ 17 element element NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 GRE GRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 containing contain VERB VBG VerbForm=Ger _ _ _ _ 23 DNA dna NOUN NN Number=Sing _ _ _ _ 24 fragments fragment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 7963 # text = Using this assay system, we have evaluated the contributions of ligand binding and heat activation to DNA binding by these glucocorticoid receptors. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 assay assay NOUN NN Number=Sing _ _ _ _ 4 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 evaluated evaluate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 contributions contribution NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 ligand ligand NOUN NN Number=Sing _ _ _ _ 13 binding binding NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 heat heat NOUN NN Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 DNA Dna NOUN NN Number=Sing _ _ _ _ 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 22 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 23 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 7964 # text = In vitro translated hGR was capable of selective DNA binding even in the absence of glucocorticoid. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro ADP IN Typo=Yes _ _ _ _ 3 translated translate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 hGR hgr NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 capable capable ADJ JJ Degree=Pos _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 selective selective ADJ JJ Degree=Pos _ _ _ _ 9 DNA dna NOUN NN Number=Sing _ _ _ _ 10 binding bind VERB VBG VerbForm=Ger _ _ _ _ 11 even even ADV RB _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 absence absence NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 7965 # text = Treatment with dexamethasone or the antiglucocorticoid RU486 had no additional effect on the DNA-binding capacity when receptor preparations were maintained at 0 C (no activation). 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 4 or or CCONJ CC _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 antiglucocorticoid antiglucocorticoid ADJ JJ Degree=Pos _ _ _ _ 7 RU486 Ru486 PROPN NNP Number=Sing _ _ _ _ 8 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 no no DET DT _ _ _ _ _ 10 additional additional ADJ JJ Degree=Pos _ _ _ _ 11 effect effect NOUN NN Number=Sing _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 capacity capacity NOUN NN Number=Sing _ _ _ _ 18 when when ADV WRB PronType=Int _ _ _ _ 19 receptor receptor ADJ JJ Degree=Pos _ _ _ _ 20 preparations preparation NOUN NNS Number=Plur _ _ _ _ 21 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 maintained maintain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 at at ADP IN _ _ _ _ _ 24 0 0 NUM CD NumType=Card _ _ _ _ 25 C C NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 no no DET DT _ _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 7966 # text = In contrast, addition of either ligand or antagonist in combination with a heat activation step promoted DNA binding by approximately 3-fold over that of heat-activated unliganded receptors. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 addition addition NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 either either CCONJ CC _ _ _ _ _ 7 ligand ligand NOUN NN Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 antagonist antagonist NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 combination combination NOUN NN Number=Sing _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 heat heat NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 step step NOUN NN Number=Sing _ _ _ _ 17 promoted promote VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 DNA Dna NOUN NN Number=Sing _ _ _ _ 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 approximately approximately ADV RB _ _ _ _ _ 22 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 fold fold NOUN NN Number=Sing _ _ _ _ 25 over over ADP IN _ _ _ _ _ 26 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 heat heat NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 unliganded unliganded ADJ JJ Degree=Pos _ _ _ _ 32 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 7967 # text = Agonist (dexamethasone) was slightly more effective in supporting specific DNA binding than antagonist (RU486). 1 Agonist Agonist ADJ JJS Degree=Sup _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 slightly slightly ADV RB _ _ _ _ _ 7 more more ADV RBR _ _ _ _ _ 8 effective effective ADJ JJ Degree=Pos _ _ _ _ 9 in in SCONJ IN _ _ _ _ _ 10 supporting support VERB VBG VerbForm=Ger _ _ _ _ 11 specific specific ADJ JJ Degree=Pos _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 than than ADP IN _ _ _ _ _ 15 antagonist antagonist NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 RU486 RU486 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 7968 # text = DNA binding by in vitro synthesized GR was blocked by the addition of sodium molybdate to the receptor preparations before steroid addition and thermal activation. 1 DNA dna NOUN NN Number=Sing _ _ _ _ 2 binding bind VERB VBG VerbForm=Ger _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 vitro vitro PROPN NNP Number=Sing _ _ _ _ 6 synthesized synthesized VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 GR Gr PROPN NNP Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 addition addition NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 sodium sodium NOUN NN Number=Sing _ _ _ _ 15 molybdate molybdate NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 receptor receptor NOUN NN Number=Sing _ _ _ _ 19 preparations preparation NOUN NNS Number=Plur _ _ _ _ 20 before before ADP IN _ _ _ _ _ 21 steroid steroid ADJ JJ Degree=Pos _ _ _ _ 22 addition addition NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 thermal thermal ADJ JJ Degree=Pos _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 7969 # text = Addition of KCl resulted in less DNA binding either due to blockage of DNA-receptor complex formation or disruption of the complexes. 1 Addition Addition PROPN NNP Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 KCl KCl PROPN NNP Number=Sing _ _ _ _ 4 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 less less ADJ JJR Degree=Cmp _ _ _ _ 7 DNA dna NOUN NN Number=Sing _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 either either CCONJ CC _ _ _ _ _ 10 due due ADP IN _ _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 blockage blockage NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 receptor receptor NOUN NN Number=Sing _ _ _ _ 17 complex complex NOUN NN Number=Sing _ _ _ _ 18 formation formation NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 disruption disruption NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 7970 # text = The specificity of DNA binding by cell-free synthesized hGR was analyzed further by examining the abilities of various DNAs to compete for binding to a naturally occurring GRE found in the mouse mammary tumor virus-long terminal repeat. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 specificity specificity NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ _ 5 binding bind VERB VBG VerbForm=Ger _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 free free ADJ JJ Degree=Pos _ _ _ _ 10 synthesized synthesized ADJ JJ Degree=Pos _ _ _ _ 11 hGR hgr NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 further further ADV RB _ _ _ _ _ 15 by by SCONJ IN _ _ _ _ _ 16 examining examine VERB VBG VerbForm=Ger _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 abilities abilitie NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 various various ADJ JJ Degree=Pos _ _ _ _ 21 DNAs Dna NOUN NNS Number=Plur _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 compete compete VERB VB VerbForm=Inf _ _ _ _ 24 for for SCONJ IN _ _ _ _ _ 25 binding bind VERB VBG VerbForm=Ger _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 naturally naturally ADV RB _ _ _ _ _ 29 occurring occurre VERB VBG VerbForm=Ger _ _ _ _ 30 GRE Gre PROPN NNP Number=Sing _ _ _ _ 31 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 mouse mouse NOUN NN Number=Sing _ _ _ _ 35 mammary mammary ADJ JJ Degree=Pos _ _ _ _ 36 tumor tumor NOUN NN Number=Sing _ _ _ _ 37 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 long long ADJ JJ Degree=Pos _ _ _ _ 40 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 41 repeat repeat NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 7971 # text = Oligonucleotides containing the consensus GRE were the most efficient competitors, and fragments containing regulatory sequences from glucocorticoid-repressible genes were somewhat competitive, whereas single stranded oligonucleotides were unable to compete for mouse mammary tumor virus-long terminal repeat DNA binding, except when competitor was present at extremely high concentrations. 1 Oligonucleotides Oligonucleotides SCONJ IN _ _ _ _ _ 2 containing contain VERB VBG VerbForm=Ger _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 consensus consensus NOUN NN Number=Sing _ _ _ _ 5 GRE GRE ADV RB PronType=Dem _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 most most ADV RBS _ _ _ _ _ 9 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 10 competitors competitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 fragments fragment NOUN NNS Number=Plur _ _ _ _ 14 containing contain VERB VBG VerbForm=Ger _ _ _ _ 15 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 16 sequences sequence NOUN NNS Number=Plur _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 repressible repressible ADJ JJ Degree=Pos _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 somewhat somewhat ADV RB _ _ _ _ _ 24 competitive competitive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 whereas whereas SCONJ IN _ _ _ _ _ 27 single single ADJ JJ Degree=Pos _ _ _ _ 28 stranded strand VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 30 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 unable unable ADJ JJ Degree=Pos _ _ _ _ 32 to to PART TO _ _ _ _ _ 33 compete compete VERB VB VerbForm=Inf _ _ _ _ 34 for for ADP IN _ _ _ _ _ 35 mouse mouse NOUN NN Number=Sing _ _ _ _ 36 mammary mammary NOUN NN Number=Sing _ _ _ _ 37 tumor tumor NOUN NN Number=Sing _ _ _ _ 38 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 long long ADJ JJ Degree=Pos _ _ _ _ 41 terminal terminal NOUN NN Number=Sing _ _ _ _ 42 repeat repeat NOUN NN Number=Sing _ _ _ _ 43 DNA dna NOUN NN Number=Sing _ _ _ _ 44 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 except except ADP IN _ _ _ _ _ 47 when when ADV WRB PronType=Int _ _ _ _ 48 competitor competitor NOUN NN Number=Sing _ _ _ _ 49 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 50 present present ADJ JJ Degree=Pos _ _ _ _ 51 at at ADP IN _ _ _ _ _ 52 extremely extremely ADV RB _ _ _ _ _ 53 high high ADJ JJ Degree=Pos _ _ _ _ 54 concentrations concentration NOUN NNS Number=Plur _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 7972 # text = Together these studies indicate that hGR synthesized in rabbit reticulocyte lysates displays many of the same properties, including GRE-specific DNA binding, observed for glucocorticoid receptor present in cytosolic extracts of mammalian cells and tissues. 1 Together together SCONJ IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 hGR hGR PROPN NNP Number=Sing _ _ _ _ 7 synthesized synthesize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 rabbit rabbit NOUN NN Number=Sing _ _ _ _ 10 reticulocyte reticulocyte NOUN NN Number=Sing _ _ _ _ 11 lysates lysate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 displays display VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 many many ADJ JJ Degree=Pos _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 same same ADJ JJ Degree=Pos _ _ _ _ 17 properties property NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 including include VERB VBG VerbForm=Ger _ _ _ _ 20 GRE Gre ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 specific specific ADJ JJ Degree=Pos _ _ _ _ 23 DNA dna NOUN NN Number=Sing _ _ _ _ 24 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 29 receptor receptor NOUN NN Number=Sing _ _ _ _ 30 present present ADJ JJ Degree=Pos _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 33 extracts extract NOUN NNS Number=Plur _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 7973 # text = Similarities between the effects of dexamethasone and RU486 suggest that the antiglucocorticoid properties of RU486 do not occur at the level of specific DNA binding. 1 Similarities similarity NOUN NNS Number=Plur _ _ _ _ 2 between between ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effects effect NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 RU486 RU486 PROPN NNP Number=Sing _ _ _ _ 9 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 antiglucocorticoid antiglucocorticoid ADJ JJ Degree=Pos _ _ _ _ 13 properties property NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 RU486 Ru486 NUM CD NumType=Card _ _ _ _ 16 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 not not PART RB _ _ _ _ _ 18 occur occur VERB VB VerbForm=Inf _ _ _ _ 19 at at ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 level level NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 specific specific ADJ JJ Degree=Pos _ _ _ _ 24 DNA dna NOUN NN Number=Sing _ _ _ _ 25 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7974 # text = Document 0030011281 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011281 0030011281 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7975 # text = Thrombin-induced p65 homodimer binding to downstream NF-kappa B site of the promoter mediates endothelial ICAM-1 expression and neutrophil adhesion. 1 Thrombin Thrombin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -induced -induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 p65 p65 NUM CD NumType=Card _ _ _ _ 4 homodimer homodimer NOUN NN Number=Sing _ _ _ _ 5 binding bind VERB VBG VerbForm=Ger _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 8 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 18 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 24 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7976 # text = We investigated the mechanisms by which proinflammatory mediator, thrombin, released during intravascular coagulation and tissue injury, induces ICAM-1 (CD54) expression in endothelial cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 which which DET WDT PronType=Int _ _ _ _ 7 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 8 mediator mediator NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 thrombin thrombin NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 released release VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 during during ADP IN _ _ _ _ _ 14 intravascular intravascular ADJ JJ Degree=Pos _ _ _ _ 15 coagulation coagulation NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 tissue tissue NOUN NN Number=Sing _ _ _ _ 18 injury injury NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 induces induce NOUN NNS Number=Plur _ _ _ _ 21 ICAM ICAm NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - SYM SYM _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 CD54 CD54 NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 7977 # text = Stimulation of HUVEC with thrombin resulted in dose- and time-dependent increases in ICAM-1 mRNA and cell surface expression and in ICAM-1-dependent endothelial adhesivity toward polymorphonuclear leukocytes. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HUVEC HUVEC PROPN NNP Number=Sing _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 thrombin thrombin ADP IN _ _ _ _ _ 6 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 14 increases increase NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 ICAM ICAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 surface surface NOUN NN Number=Sing _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 31 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 32 adhesivity adhesivity NOUN NN Number=Sing _ _ _ _ 33 toward toward ADP IN _ _ _ _ _ 34 polymorphonuclear polymorphonuclear ADJ JJ Degree=Pos _ _ _ _ 35 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 7978 # text = Transient transfection of endothelial cells with ICAM-1 promoter luciferase reporter gene (ICAM-1LUC) constructs indicated that deletion of upstream NF-kappa B site (-533 bases from translation start site) had no effect on thrombin responsiveness, whereas mutation/deletion of downstream NF-kappa B site (-223 bases from the translation start site) prevented the activation of ICAM-1 promoter, indicating that the downstream NF-kappa B site is critical for thrombin inducibility. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 transfection transfection NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 12 reporter reporter NOUN NN Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 -1LUC -1luc NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 constructs construct NOUN NNS Number=Plur _ _ _ _ 19 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 21 deletion deletion NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 24 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa NOUN NN Number=Sing _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ _ 28 site site NOUN NN Number=Sing _ _ _ _ 29 (- (- PUNCT . _ _ _ _ SpaceAfter=No 30 533 533 NUM CD NumType=Card _ _ _ _ 31 bases base NOUN NNS Number=Plur _ _ _ _ 32 from from ADP IN _ _ _ _ _ 33 translation translation NOUN NN Number=Sing _ _ _ _ 34 start start NOUN NN Number=Sing _ _ _ _ 35 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 38 no no DET DT _ _ _ _ _ 39 effect effect NOUN NN Number=Sing _ _ _ _ 40 on on ADP IN _ _ _ _ _ 41 thrombin thrombin NOUN NN Number=Sing _ _ _ _ 42 responsiveness responsiveness NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 whereas whereas SCONJ IN _ _ _ _ _ 45 mutation mutation NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 47 deletion deletion NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 50 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 kappa kappa NOUN NN Number=Sing _ _ _ _ 53 B b NOUN NN Number=Sing _ _ _ _ 54 site site NOUN NN Number=Sing _ _ _ _ 55 (- (- PUNCT . _ _ _ _ SpaceAfter=No 56 223 223 NUM CD NumType=Card _ _ _ _ 57 bases base NOUN NNS Number=Plur _ _ _ _ 58 from from ADP IN _ _ _ _ _ 59 the the DET DT Definite=Def|PronType=Art _ _ _ _ 60 translation translation NOUN NN Number=Sing _ _ _ _ 61 start start NOUN NN Number=Sing _ _ _ _ 62 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 63 ) ) PUNCT -RRB- _ _ _ _ _ 64 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 65 the the DET DT Definite=Def|PronType=Art _ _ _ _ 66 activation activation NOUN NN Number=Sing _ _ _ _ 67 of of ADP IN _ _ _ _ _ 68 ICAM ICAm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 69 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 70 1 1 NUM CD NumType=Card _ _ _ _ 71 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 72 , , PUNCT , _ _ _ _ _ 73 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 74 that that SCONJ IN _ _ _ _ _ 75 the the DET DT Definite=Def|PronType=Art _ _ _ _ 76 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 77 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 78 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 79 kappa kappa NOUN NN Number=Sing _ _ _ _ 80 B b NOUN NN Number=Sing _ _ _ _ 81 site site NOUN NN Number=Sing _ _ _ _ 82 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 83 critical critical ADJ JJ Degree=Pos _ _ _ _ 84 for for ADP IN _ _ _ _ _ 85 thrombin thrombin ADP IN _ _ _ _ _ 86 inducibility inducibility NOUN NN Number=Sing _ _ _ SpaceAfter=No 87 . . PUNCT . _ _ _ _ _ # sent_id = 7979 # text = NF-kappa B-directed luciferase activity increased approximately 3-fold when cells transfected with the plasmid pNF-kappa BLUC containing five copies of consensus NF-kappa B site linked to a minimal adenovirus E1B promoter-luciferase gene were exposed to thrombin, indicating that activation of NF-kappa B was essential for thrombin response. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 approximately approximately ADV RB _ _ _ _ _ 11 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 fold fold VERB VB VerbForm=Inf _ _ _ _ 14 when when ADV WRB PronType=Int _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 20 pNF pNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappa kappa NOUN NN Number=Sing _ _ _ _ 23 BLUC BLUC NOUN NN Number=Sing _ _ _ _ 24 containing contain VERB VBG VerbForm=Ger _ _ _ _ 25 five five NUM CD NumType=Card _ _ _ _ 26 copies copy NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 consensus consensus NOUN NN Number=Sing _ _ _ _ 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappa kappa PROPN NNP Number=Sing _ _ _ _ 32 B b PROPN NNP Number=Sing _ _ _ _ 33 site site NOUN NN Number=Sing _ _ _ _ 34 linked link VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 38 adenovirus adenovirus NOUN NN Number=Sing _ _ _ _ 39 E1B E1b NOUN NN Number=Sing _ _ _ _ 40 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 43 gene gene NOUN NN Number=Sing _ _ _ _ 44 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 45 exposed expose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 46 to to ADP IN _ _ _ _ _ 47 thrombin thrombin NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 50 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 51 activation activation NOUN NN Number=Sing _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 kappa kappa PROPN NNP Number=Sing _ _ _ _ 56 B b PROPN NNP Number=Sing _ _ _ _ 57 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 58 essential essential ADJ JJ Degree=Pos _ _ _ _ 59 for for ADP IN _ _ _ _ _ 60 thrombin thrombin ADP IN _ _ _ _ _ 61 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 62 . . PUNCT . _ _ _ _ _ # sent_id = 7980 # text = Gel supershift assays demonstrated that thrombin induced binding of NF-kappa Bp65 (Rel A) to downstream NF-kappa B site of the ICAM-1 promoter. 1 Gel gel NOUN NN Number=Sing _ _ _ _ 2 supershift supershift VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 assays assays NOUN NNS Number=Plur _ _ _ _ 4 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 thrombin thrombin ADP IN _ _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 binding binding NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa PROPN NNP Number=Sing _ _ _ _ 13 Bp65 Bp65 PROPN NNP Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 Rel Rel PROPN NNP Number=Sing _ _ _ _ 16 A a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 20 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappa kappa PROPN NNP Number=Sing _ _ _ _ 23 B b PROPN NNP Number=Sing _ _ _ _ 24 site site NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 7981 # text = Thrombin receptor activation peptide, a 14-amino-acid peptide representing the new NH2 terminus of proteolytically activated receptor-1, mimicked thrombin's action in inducing ICAM-1 expression. 1 Thrombin Thrombin ADP IN _ _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 peptide peptide NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 14 14 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 amino amino NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 acid acid NOUN NN Number=Sing _ _ _ _ 12 peptide peptide NOUN NN Number=Sing _ _ _ _ 13 representing represent VERB VBG VerbForm=Ger _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 new new ADJ JJ Degree=Pos _ _ _ _ 16 NH2 Nh2 NOUN NN Number=Sing _ _ _ _ 17 terminus terminus NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 proteolytically proteolytically ADV RB _ _ _ _ _ 20 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 mimicked mimick VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 thrombin thrombin NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 's 's PART POS _ _ _ _ _ 28 action action NOUN NN Number=Sing _ _ _ _ 29 in in SCONJ IN _ _ _ _ _ 30 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 31 ICAM ICAm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 7982 # text = These data indicate that thrombin activates endothelial ICAM-1 expression and polymorphonuclear leukocyte adhesion by NF-kappa Bp65 binding to the downstream NF-kappa B site of ICAM-1 promoter after proteolytically activated receptor-1 activation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 thrombin thrombin NOUN NN Number=Sing _ _ _ _ 6 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 8 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 polymorphonuclear polymorphonuclear ADJ JJ Degree=Pos _ _ _ _ 14 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 15 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa PROPN NNP Number=Sing _ _ _ _ 20 Bp65 Bp65 PROPN NNP Number=Sing _ _ _ _ 21 binding bind VERB VBG VerbForm=Ger _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 25 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ _ 29 site site NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 ICAM ICAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 promoter promoter NOUN NN Number=Sing _ _ _ _ 35 after after ADP IN _ _ _ _ _ 36 proteolytically proteolytically ADV RB _ _ _ _ _ 37 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 -1 -1 NUM CD NumType=Card _ _ _ _ 40 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7983 # text = Document 0030011282 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011282 0030011282 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7984 # text = Constitutive expression c-fos, c-jun, and NF kappa B mRNA is in nucleated fetal blood cells and up-regulation of c-fos and c-jun with anti-CD3 stimulation. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 c- c- PUNCT : _ _ _ _ SpaceAfter=No 4 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 c- c- SYM NFP _ _ _ _ SpaceAfter=No 7 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ _ 11 kappa kappa PROPN NNP Number=Sing _ _ _ _ 12 B B PROPN NNP Number=Sing _ _ _ _ 13 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 nucleated nucleated ADJ JJ Degree=Pos _ _ _ _ 17 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 18 blood blood NOUN NN Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 regulation regulation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 fos fo NOUN NNS Number=Plur _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 c- c- SYM NFP _ _ _ _ SpaceAfter=No 30 jun jun NOUN NN Number=Sing _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 33 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7985 # text = Fetal and neonatal lymphocytes are relatively resistant to activation and cytokine production when stimulated either via their T-cell antigen receptors or lectins. 1 Fetal Fetal ADJ JJ Degree=Pos _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 4 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 relatively relatively ADV RB _ _ _ _ _ 7 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 12 production production NOUN NN Number=Sing _ _ _ _ 13 when when ADV WRB PronType=Int _ _ _ _ 14 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 either either ADV RB _ _ _ _ _ 16 via via ADP IN _ _ _ _ _ 17 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 cell cell VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 21 receptors receptor NOUN NNS Number=Plur _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 lectins lectin NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 7986 # text = The molecular mechanism(s) responsible for this phenomenon have not been clearly elucidated. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 3 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 s s X AFX _ _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 10 phenomenon phenomenon NOUN NN Number=Sing _ _ _ _ 11 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 14 clearly clearly ADV RB _ _ _ _ _ 15 elucidated elucidate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 7987 # text = We have hypothesized that such defects in fetal/neonatal T-cell activation may be due to lack of expression of the transcriptional regulatory elements required for T-cell activation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 hypothesized hypothesize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 such such ADJ JJ Degree=Pos _ _ _ _ 6 defects defect NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 fetal fetal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 / / PUNCT , _ _ _ _ SpaceAfter=No 10 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 11 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 due due ADP IN _ _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 lack lack NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 24 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 25 elements element NOUN NNS Number=Plur _ _ _ _ 26 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 7988 # text = We used reverse transcriptase-polymerase chain reaction to examine both fetal and term neonatal cord bloods for mRNA expression of three transcription factors implicated in T-cell activation: 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 reverse reverse NOUN NN Number=Sing _ _ _ _ 4 transcriptase transcriptase NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 7 chain chain NOUN NN Number=Sing _ _ _ _ 8 reaction reaction NOUN NN Number=Sing _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 examine examine NOUN NN Number=Sing _ _ _ _ 11 both both CCONJ CC _ _ _ _ _ 12 fetal fetal NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 term term NOUN NN Number=Sing _ _ _ _ 15 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 16 cord cord NOUN NN Number=Sing _ _ _ _ 17 bloods blood NOUN NNS Number=Plur _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 mRNA mRNA DET DT Definite=Ind|PronType=Art _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 three three NUM CD NumType=Card _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factors factor NOUN NNS Number=Plur _ _ _ _ 25 implicated implicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 : : PUNCT : _ _ _ _ _ # sent_id = 7989 # text = c-jun, c-fos, and NF kappa B (p50 subunit). 1 c- c- SYM NFP _ _ _ _ SpaceAfter=No 2 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 c- c- PUNCT : _ _ _ _ SpaceAfter=No 5 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ _ 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B B PROPN NNP Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 p50 p50 NUM CD NumType=Card _ _ _ _ 13 subunit subunit NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 7990 # text = We demonstrate that mRNAs for all three of these regulatory factors are expressed in fetal blood cells by the 27th week of gestation and in term cord bloods. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 mRNAs mRNA NOUN NNS Number=Plur _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 all all DET DT _ _ _ _ _ 7 three three NUM CD NumType=Card _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 10 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 16 blood blood NOUN NN Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 27th 27th ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 21 week week NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 gestation gestation NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 term term NOUN NN Number=Sing _ _ _ _ 27 cord cord NOUN NN Number=Sing _ _ _ _ 28 bloods bloods NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 7991 # text = Activation of term infant cord blood mononuclear cells with anti-CD3 monoclonal antibodies resulted in up-regulation of both c-jun and c-fos mRNAs within 15 min of stimulation. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 term term NOUN NN Number=Sing _ _ _ _ 4 infant infant NOUN NN Number=Sing _ _ _ _ 5 cord cord NOUN NN Number=Sing _ _ _ _ 6 blood blood NOUN NN Number=Sing _ _ _ _ 7 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 11 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 12 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 13 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 regulation regulation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 both both CCONJ CC _ _ _ _ _ 20 c- c- SYM NFP _ _ _ _ SpaceAfter=No 21 jun jun NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 fos fo NOUN NNS Number=Plur _ _ _ _ 26 mRNAs mRNA NOUN NNS Number=Plur _ _ _ _ 27 within within ADP IN _ _ _ _ _ 28 15 15 NUM CD NumType=Card _ _ _ _ 29 min min NOUN NNS Number=Plur _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 7992 # text = However, secretion of IL-2 by anti-CD3-stimulated cord blood mononuclear cells was still blunted compared with control cells from adults. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 secretion secretion NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 -stimulated -stimulated ADJ JJ Degree=Pos _ _ _ _ 11 cord cord NOUN NN Number=Sing _ _ _ _ 12 blood blood NOUN NN Number=Sing _ _ _ _ 13 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 still still ADV RB _ _ _ _ _ 17 blunted blunt VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 control control NOUN NN Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 adults adult NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 7993 # text = We conclude that fetal nucleated blood cells constitutively express important genes for cytokine regulation and are able to increase intracellular accumulation of the mRNAs for these factors in response to anti-CD3 stimulation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 5 nucleated nucleate ADJ JJ Degree=Pos _ _ _ _ 6 blood blood NOUN NN Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 constitutively constitutively ADV RB _ _ _ _ _ 9 express express ADJ JJ Degree=Pos _ _ _ _ 10 important important ADJ JJ Degree=Pos _ _ _ _ 11 genes gene NOUN NNS Number=Plur _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 14 regulation regulation NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 able able ADJ JJ Degree=Pos _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 increase increase VERB VB VerbForm=Inf _ _ _ _ 20 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 21 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 mRNAs mRNA NOUN NNS Number=Plur _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 27 factors factor NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 response response NOUN NN Number=Sing _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 32 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 7994 # text = Thus, qualitative differences in the capacity to regulate these factors could not be shown in fetal blood cells. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 qualitative qualitative ADJ JJ Degree=Pos _ _ _ _ 4 differences difference NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 capacity capacity NOUN NN Number=Sing _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ _ 12 could could AUX MD VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 18 blood blood NOUN NN Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 7995 # text = Quantitative experiments comparing binding of these transcription factors to the IL-2 promoter are currently under investigation. 1 Quantitative Quantitative ADJ JJ Degree=Pos _ _ _ _ 2 experiments experiment NOUN NNS Number=Plur _ _ _ _ 3 comparing compare VERB VBG VerbForm=Ger _ _ _ _ 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 currently currently ADV RB _ _ _ _ _ 17 under under ADP IN _ _ _ _ _ 18 investigation investigation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 7996 # text = Document 0030011284 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011284 0030011284 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 7997 # text = Triggering of complement receptors CR1 (CD35) and CR3 (CD11b/CD18) induces nuclear translocation of NF-kappa B (p50/p65) in human monocytes and enhances viral replication in HIV-infected monocytic cells. 1 Triggering Triggering ADP IN _ _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 complement complement NOUN NN Number=Sing _ _ _ _ 4 receptors receptor NOUN NNS Number=Plur _ _ _ _ 5 CR1 CR1 PROPN NNP Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 CD35 CD35 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 CR3 CR3 NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 CD11b/CD18 CD11b/CD18 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 translocation translocation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa PROPN NNP Number=Sing _ _ _ _ 21 B b PROPN NNP Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 / / SYM SYM _ _ _ _ SpaceAfter=No 25 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 enhances enhance NOUN NNS Number=Plur _ _ _ _ 32 viral viral ADJ JJ Degree=Pos _ _ _ _ 33 replication replication NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 HIV- HIV- PUNCT : _ _ _ _ SpaceAfter=No 36 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 7998 # text = Monocyte/macrophages may harbor 1 Monocyte Monocyte PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 / / PUNCT , _ _ _ _ SpaceAfter=No 3 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 4 may may AUX MD VerbForm=Fin _ _ _ _ 5 harbor harbor VERB VB VerbForm=Inf _ _ _ _ # sent_id = 7999 # text = HIV in a nonproductive fashion for prolonged periods of time. 1 HIV haHive VERB VB Abbr=Yes|VerbForm=Inf _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 nonproductive nonproductive ADJ JJ Degree=Pos _ _ _ _ 5 fashion fashion NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 prolonged prolonge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 periods period NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 8000 # text = Viral gene expression may be reactivated by stimulation of the cells with LPS or cytokines such as TNF-alpha in vitro. 1 Viral viral ADJ JJ Degree=Pos _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 may may AUX MD VerbForm=Fin _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 reactivated reactivate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 LPS Lp NOUN NNS Number=Plur _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 16 such such ADJ JJ Degree=Pos _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 alpha alpha ADP IN _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 8001 # text = The effect of LPS and TNF-alpha is mediated by their ability to induce nuclear translocation of the DNA-binding heterodimer NF-kappa B (p50/p65), which binds to a specific sequence in the HIV-long terminal repeat. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 LPS LPS PROPN NNP Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 alpha alpha NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 ability ability NOUN NN Number=Sing _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 induce induce VERB VB VerbForm=Inf _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 translocation translocation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 24 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa NOUN NN Number=Sing _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 / / SYM SYM _ _ _ _ SpaceAfter=No 31 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 which which PRON WDT PronType=Rel _ _ _ _ 35 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 specific specific ADJ JJ Degree=Pos _ _ _ _ 39 sequence sequence NOUN NN Number=Sing _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 long long ADJ JJ Degree=Pos _ _ _ _ 45 terminal terminal NOUN NN Number=Sing _ _ _ _ 46 repeat repeat NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 8002 # text = The present study demonstrates that triggering of complement receptors CR1 (CD35) and CR3 (CD11b/CD18) enhances viral replication in HIV-infected human monocytic cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 triggering triggere VERB VBG VerbForm=Ger _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 complement complement NOUN NN Number=Sing _ _ _ _ 9 receptors receptor NOUN NNS Number=Plur _ _ _ _ 10 CR1 CR1 PROPN NNP Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 CD35 CD35 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 CR3 CR3 NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 CD11b/CD Cd11b/cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 18 18 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 enhances enhance NOUN NNS Number=Plur _ _ _ _ 21 viral viral ADJ JJ Degree=Pos _ _ _ _ 22 replication replication NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 HIV- HIV- SYM NFP _ _ _ _ SpaceAfter=No 25 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 8003 # text = Monocytic cell lines and normal peripheral blood monocytes were infected with HIV-1 in vitro and cultured in the presence or absence of F(ab')2 fragments of monoclonal anti-CR1 or anti-CR3 1 Monocytic Monocytic ADJ JJ Degree=Pos _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 lines line NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 normal normal ADJ JJ Degree=Pos _ _ _ _ 6 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 7 blood blood NOUN NN Number=Sing _ _ _ _ 8 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 infected infect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 vitro vitro NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 cultured culture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 presence presence NOUN NN Number=Sing _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 absence absence NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 F F PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 ab ab NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 2 2 NUM CD NumType=Card _ _ _ _ 31 fragments fragment NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 34 anti-CR1 anti-cr1 NOUN NN Number=Sing _ _ _ _ 35 or or CCONJ CC _ _ _ _ _ 36 anti-CR3 anti-CR3 NOUN NN Number=Sing _ _ _ _ # sent_id = 8004 # text = Abs or with C3 fragments. 1 Abs Abs PROPN NNP Number=Sing _ _ _ _ 2 or or CCONJ CC _ _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 C3 C3 NOUN NN Number=Sing _ _ _ _ 5 fragments fragment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 . . PUNCT . _ _ _ _ _ # sent_id = 8005 # text = Stimulation of CR1 or CR3 induces a two- to fourfold increase in the amount of cell-associated and released p24 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 CR1 CR1 NUM CD NumType=Card _ _ _ _ 4 or or CCONJ CC _ _ _ _ _ 5 CR3 CR3 NUM CD NumType=Card _ _ _ _ 6 induces induce NOUN NNS Number=Plur _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 fourfold fourfold VERB VB VerbForm=Inf _ _ _ _ 12 increase increase NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 amount amount NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 cell cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 released release VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 p24 p24 NOUN NN Number=Sing _ _ _ _ # sent_id = 8006 # text = Ag in cell cultures that was equivalent to that observed in control cultures triggered with LPS. 1 Ag ag VERB VBG VerbForm=Ger _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 cultures culture NOUN NNS Number=Plur _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 equivalent equivalent ADJ JJ Degree=Pos _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 10 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 control control NOUN NN Number=Sing _ _ _ _ 13 cultures culture NOUN NNS Number=Plur _ _ _ _ 14 triggered trigger VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 8007 # text = We further observed that stimulation of CR1 or CR3 induces the nuclear translocation of NF-kappa B p50/p65 in infected cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 CR1 CR1 NUM CD NumType=Card _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 CR3 CR3 NUM CD NumType=Card _ _ _ _ 10 induces induce NOUN NNS Number=Plur _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 translocation translocation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B B PROPN NNP Number=Sing _ _ _ _ 19 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 p65 p65 NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 infected infect ADJ JJ Degree=Pos _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8008 # text = Translocation of NF-kappa B p50/p65 was also observed following stimulation of CR1 or CR3 of uninfected peripheral blood monocytes from HIV-seronegative donors. 1 Translocation Translocation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B B NOUN NN Number=Sing _ _ _ _ 7 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 p65 p65 NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 also also ADV RB _ _ _ _ _ 12 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 following follow VERB VBG VerbForm=Ger _ _ _ _ 14 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 CR1 CR1 NOUN NN Number=Sing _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 CR3 CR3 NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 uninfected uninfect ADJ JJ Degree=Pos _ _ _ _ 21 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 22 blood blood NOUN NN Number=Sing _ _ _ _ 23 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 HIV- HIV- SYM NFP _ _ _ _ SpaceAfter=No 26 seronegative seronegative ADJ JJ Degree=Pos _ _ _ _ 27 donors donor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 8009 # text = The amount of protein translocated was similar to that observed when cells were stimulated with rhTNF-alpha. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 amount amount NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 translocated translocate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 similar similar ADJ JJ Degree=Pos _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 10 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 when when ADV WRB PronType=Int _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 rhTNF rhTNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 8010 # text = TNF-alpha did not mediate the translocation of NF-kappa B p50/p65 induced by triggering of complement receptors. 1 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 alpha alpha NOUN NN Number=Sing _ _ _ _ 4 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 translocation translocation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa PROPN NNP Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 p65 p65 NOUN NN Number=Sing _ _ _ _ 17 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 triggering triggering NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 complement complement ADJ JJ Degree=Pos _ _ _ _ 22 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 8011 # text = Taken together, these observations suggest that HIV gene expression may be activated in infected monocytes through interaction of the cells with complement-opsonized particles and that enhanced viral replication is associated with C3 receptor-mediated nuclear translocation of the NF-kappa B complex. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 observations observation NOUN NNS Number=Plur _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 HIV HIV PROPN NNP Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 may may AUX MD VerbForm=Fin _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 17 through through ADP IN _ _ _ _ _ 18 interaction interaction NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 complement complement NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 opsonized opsonize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 particles particle NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 that that SCONJ IN _ _ _ _ _ 29 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 viral viral ADJ JJ Degree=Pos _ _ _ _ 31 replication replication NOUN NN Number=Sing _ _ _ _ 32 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 C3 C3 NUM CD NumType=Card _ _ _ _ 36 receptor- receptor- PUNCT : _ _ _ _ SpaceAfter=No 37 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 39 translocation translocation NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 kappa kappa NOUN NN Number=Sing _ _ _ _ 45 B b NOUN NN Number=Sing _ _ _ _ 46 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8012 # text = Document 0030011288 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011288 0030011288 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8013 # text = The carboxyl-terminal cytoplasmic domain of CD36 is required for oxidized low-density lipoprotein modulation of NF-kappaB activity by tumor necrosis factor-alpha. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 carboxyl carboxyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 5 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 6 domain domain NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 CD36 CD36 PROPN NNP Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 oxidized oxidize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 low low ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 density density NOUN NN Number=Sing _ _ _ _ 16 lipoprotein lipoprotein NOUN NN Number=Sing _ _ _ _ 17 modulation modulation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 tumor tumor NOUN NN Number=Sing _ _ _ _ 25 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8014 # text = The binding of oxidized low-density lipoprotein (Ox LDL) by monocyte-macrophages causes pleiotropic effects, including changes in gene expression, and is thought to represent an early event in atherogenesis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 binding binding NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 oxidized oxidize ADJ JJ Degree=Pos _ _ _ _ 5 low low ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 density density NOUN NN Number=Sing _ _ _ _ 8 lipoprotein lipoprotein NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 Ox Ox PROPN NNP Number=Sing _ _ _ _ 11 LDL LDL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 macrophages macrophage VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 causes cause NOUN NNS Number=Plur _ _ _ _ 18 pleiotropic pleiotropic ADJ JJ Degree=Pos _ _ _ _ 19 effects effect NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 including include VERB VBG VerbForm=Ger _ _ _ _ 22 changes change NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 to to PART TO _ _ _ _ _ 31 represent represent VERB VB VerbForm=Inf _ _ _ _ 32 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 early early ADJ JJ Degree=Pos _ _ _ _ 34 event event NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 atherogenesis atherogenesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 8015 # text = The integral membrane glycoprotein CD36 appears to play a physiological role in binding and uptake of Ox LDL by monocyte-macrophages, although the molecular events associated with CD36-Ox LDL interaction are unknown. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 integral integral ADJ JJ Degree=Pos _ _ _ _ 3 membrane membrane NOUN NN Number=Sing _ _ _ _ 4 glycoprotein glycoprotein NOUN NN Number=Sing _ _ _ _ 5 CD CD NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 36 36 NUM CD NumType=Card _ _ _ _ 7 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 play play VERB VB VerbForm=Inf _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 physiological physiological ADJ JJ Degree=Pos _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 in in SCONJ IN _ _ _ _ _ 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 uptake uptake NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 Ox Ox PROPN NNP Number=Sing _ _ _ _ 19 LDL LDL PROPN NNP Number=Sing _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 monocyte- monocyte- SYM NFP _ _ _ _ SpaceAfter=No 22 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 although although SCONJ IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 27 events event NOUN NNS Number=Plur _ _ _ _ 28 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 CD36 Cd36 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 Ox Ox PROPN NNP Number=Sing _ _ _ _ 33 LDL Ldl PROPN NNP Number=Sing _ _ _ _ 34 interaction interaction NOUN NN Number=Sing _ _ _ _ 35 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 36 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 8016 # text = To approach this issue, we used CD36 transfected Chinese hampster ovary (CHO) cells, exposed them to Ox LDL, and determined changes in the activity of the transcription factor NF-kappaB. 1 To to PART TO _ _ _ _ _ 2 approach approach VERB VB VerbForm=Inf _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 issue issue NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 36 36 NUM CD NumType=Card _ _ _ _ 10 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 Chinese chinese ADJ JJ Degree=Pos _ _ _ _ 12 hampster hampster NOUN NN Number=Sing _ _ _ _ 13 ovary ovary NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 CHO cho NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 exposed expose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 Ox Ox PROPN NNP Number=Sing _ _ _ _ 23 LDL LDL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 changes change NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 activity activity NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 factor factor NOUN NN Number=Sing _ _ _ _ 35 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 8017 # text = We report here that Ox LDL enhanced DNA binding activity of nuclear extracts to an NF-kappaB sequence following activation of CD36-producing CHO cells with the proinflammatory cytokine tumor necrosis factor-alpha (TNF-alpha). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Ox Ox PROPN NNP Number=Sing _ _ _ _ 6 LDL LDL PROPN NNP Number=Sing _ _ _ _ 7 enhanced enhance VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 DNA dna NOUN NN Number=Sing _ _ _ _ 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 extracts extract NOUN NNS Number=Plur _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 19 sequence sequence NOUN NN Number=Sing _ _ _ _ 20 following follow VERB VBG VerbForm=Ger _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 CD36 CD36 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 -producing -produce VERB VBG VerbForm=Ger _ _ _ _ 25 CHO Chough PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 30 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 31 tumor tumor NOUN NN Number=Sing _ _ _ _ 32 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 33 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 alpha alpha NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 8018 # text = This enhanced DNA binding activity was inhibited by coincubation of CD36 transfected cells with the human CD36-specific antibody OKM5. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 DNA dna NOUN NN Number=Sing _ _ _ _ 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 coincubation coincubation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 CD36 CD36 NUM CD NumType=Card _ _ _ _ 12 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 CD36 Cd36 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 19 antibody antibody ADJ JJ Degree=Pos _ _ _ _ 20 OKM5 Okm5 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 8019 # text = We also determined that activation of NF-kappaB 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 determined determine VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ # sent_id = 8020 # text = DNA binding activity required an intact carboxyl-terminal cytoplasmic segment on CD36. 1 DNA dna NOUN NN Number=Sing _ _ _ _ 2 binding binding VERB VBG VerbForm=Ger _ _ _ _ 3 activity activity NOUN NN Number=Sing _ _ _ _ 4 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 intact intact ADJ JJ Degree=Pos _ _ _ _ 7 carboxyl carboxyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 10 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 11 segment segment NOUN NN Number=Sing _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 36 36 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 8021 # text = Our results support the idea that human CD36 mediates signal transduction events in response to Ox LDL. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 support support VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 idea idea NOUN NN Number=Sing _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 CD36 Cd36 NOUN NN Number=Sing _ _ _ _ 9 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 signal signal ADJ JJ Degree=Pos _ _ _ _ 11 transduction transduction NOUN NN Number=Sing _ _ _ _ 12 events event NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 response response NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 Ox Ox PROPN NNP Number=Sing _ _ _ _ 17 LDL LDL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8022 # text = Document 0030011290 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011290 0030011290 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8023 # text = One base pair change abolishes the T cell-restricted activity of a kB-like proto-enhancer element from the interleukin 2 promoter. 1 One one NUM CD NumType=Card _ _ _ _ 2 base base NOUN NN Number=Sing _ _ _ _ 3 pair pair NOUN NN Number=Sing _ _ _ _ 4 change change NOUN NN Number=Sing _ _ _ _ 5 abolishes abolish VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 T T PROPN NNP Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 kB kb NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 like like ADJ JJ Degree=Pos _ _ _ _ 17 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 -enhancer -enhancer NOUN NN Number=Sing _ _ _ _ 19 element element NOUN NN Number=Sing _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 23 2 2 NUM CD NumType=Card _ _ _ _ 24 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8024 # text = The inducible, T cell-specific enhancers of murine and human Interleukin 2 (Il-2) genes contain the kB-like sequence GGGATTTCACC as an essential cis-acting enhancer motif. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inducible inducible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 T T PROPN NNP Number=Sing _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 enhancers enhancer NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 murine murine NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ _ 14 2 2 NUM CD NumType=Card _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 Il Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ _ 21 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 kB kb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 like like ADJ JJ Degree=Pos _ _ _ _ 26 sequence sequence NOUN NN Number=Sing _ _ _ _ 27 GGGATTTCACC Gggatttcacc NOUN NN Number=Sing _ _ _ _ 28 as as ADP IN _ _ _ _ _ 29 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 essential essential ADJ JJ Degree=Pos _ _ _ _ 31 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 acting acte VERB VBG VerbForm=Ger _ _ _ _ 34 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 35 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 8025 # text = When cloned in multiple copies this so-called TCEd (distal T cell element) acts as an inducible proto-enhancer element in E14 1 When when ADV WRB PronType=Int _ _ _ _ 2 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 5 copies copy NOUN NNS Number=Plur _ _ _ _ 6 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 7 so so ADV RB _ _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 TCEd TCEd PROPN NNP Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 distal distal ADJ JJ Degree=Pos _ _ _ _ 13 T t NOUN NN Number=Sing _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 21 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 24 element element NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 E14 E14 PROPN NNP Number=Sing _ _ _ _ # sent_id = 8026 # text = T lymphoma cells, but not in HeLa cells. 1 T t VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 but but CCONJ CC _ _ _ _ _ 6 not not ADV RB _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 HeLa Hela PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 8027 # text = In extracts of induced, Il-2 secreting El4 cells three individual protein factors bind to TCEd DNA. 1 In in ADP IN _ _ _ _ _ 2 extracts extract NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 Il il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 secreting secreting NOUN NN Number=Sing _ _ _ _ 10 El4 El4 NUM CD NumType=Card _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 three three NUM CD NumType=Card _ _ _ _ 13 individual individual ADJ JJ Degree=Pos _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ _ 16 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 TCEd TCEd VERB VB VerbForm=Inf _ _ _ _ 19 DNA Dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 8028 # text = The binding of the most prominent factor, named TCF-1 (T cell factor 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 binding binding NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 most most ADV RBS _ _ _ _ _ 6 prominent prominent ADJ JJ Degree=Pos _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 named name VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 TCF TCF NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 T t NUM CD NumType=Card _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ # sent_id = 8029 # text = 1), is correlated with the proto-enhancer activity of TCEd. 1 1 1 X LS _ _ _ _ SpaceAfter=No 2 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 correlated correlate ADJ JJ Degree=Pos _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 -enhancer -enhancer NOUN NN Number=Sing _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 TCEd TCEd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 8030 # text = TCF-1 consists of two polypeptides of about 50 kD and 105 kD; the former seems to be related to the 50 kD polypeptide of NF-kB. 1 TCF Tcf NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 consists consist NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 two two NUM CD NumType=Card _ _ _ _ 7 polypeptides polypeptide NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 about about ADP IN _ _ _ _ _ 10 50 50 NUM CD NumType=Card _ _ _ _ 11 kD kD NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 105 105 NUM CD NumType=Card _ _ _ _ 14 kD kD NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ; ; PUNCT , _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 former former ADJ JJ Degree=Pos _ _ _ _ 18 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 be be AUX VB VerbForm=Inf _ _ _ _ 21 related related ADJ JJ Degree=Pos _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 50 50 NUM CD NumType=Card _ _ _ _ 25 kD kd NOUN NN Number=Sing _ _ _ _ 26 polypeptide polypeptide NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kB kb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 8031 # text = Purified NF-kB is also able to bind to the TCEd, but TCF-1 binds stronger than NF-kB to TCEd DNA. 1 Purified Purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kB kb PROPN NNP Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 able able ADJ JJ Degree=Pos _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 bind bind VERB VB VerbForm=Inf _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 TCEd TCEd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 TCF Tcf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 binds bind NOUN NNS Number=Plur _ _ _ _ 19 stronger stronger ADJ JJR Degree=Cmp _ _ _ _ 20 than than ADP IN _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kB kb PROPN NNP Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 TCEd TCEd VERB VB VerbForm=Inf _ _ _ _ 26 DNA Dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 8032 # text = The conversion of the TCEd to a 'perfect' NF-kB binding site leads to a tighter binding of NF-kB to TCEd DNA and, as a functional consequence, to the activity of the 'converted' TCEd motifs in HeLa cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 conversion conversion NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 TCEd TCEd PROPN NNP Number=Sing _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 9 perfect perfect ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 ' ' PUNCT '' _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kB kb PROPN NNP Number=Sing _ _ _ _ 14 binding binding VERB VBG VerbForm=Ger _ _ _ _ 15 site site NOUN NN Number=Sing _ _ _ _ 16 leads lead NOUN NNS Number=Plur _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 tighter tighter NOUN NN Number=Sing _ _ _ _ 20 binding binding VERB VBG VerbForm=Ger _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kB kb PROPN NNP Number=Sing _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 TCEd TCEd PROPN NNP Number=Sing _ _ _ _ 27 DNA Dna NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 as as ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 functional functional ADJ JJ Degree=Pos _ _ _ _ 33 consequence consequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 activity activity NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 41 converted converted ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 42 ' ' PUNCT '' _ _ _ _ _ 43 TCEd Tce NOUN NN Number=Sing _ _ _ _ 44 motifs motif NOUN NNS Number=Plur _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 47 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 8033 # text = Thus, the substitution of the underlined A residue to a C within the GGGATTTCACC motif abolishes its T cell-restricted activity and leads to its functioning in both El4 cells and HeLa cells. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 substitution substitution NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 underlined underlin VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 residue residue NOUN NN Number=Sing _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 C C PROPN NNP Number=Sing _ _ _ _ 13 within within ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 GGGATTTCACC GGGATTTCACC PROPN NNP Number=Sing _ _ _ _ 16 motif motif NOUN NN Number=Sing _ _ _ _ 17 abolishes abolish VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 28 functioning functioning VERB VBG VerbForm=Ger _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 both both DET DT _ _ _ _ _ 31 El4 El4 PROPN NNP Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 HeLa Hela ADJ JJ Degree=Pos _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 8034 # text = These results indicate that lymphocyte-specific factors binding to the TCEd are involved in the control of T cell specific-transcription of the Il-2 gene. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 lymphocyte lymphocyte ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 TCEd tced NOUN NN Number=Sing _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 involved involved ADJ JJ Degree=Pos _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 control control NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cell cell PROPN NNP Number=Sing _ _ _ _ 21 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 Il Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ _ 29 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8035 # text = Document 0030011296 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011296 0030011296 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8036 # text = IL-2 gene expression and NF-kappa B activation through CD28 requires reactive oxygen production by 5-lipoxygenase. 1 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 through through ADP IN _ _ _ _ _ 13 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 14 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 16 oxygen oxygen ADJ JJ Degree=Pos _ _ _ _ 17 production production NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 lipoxygenase lipoxygenase NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8037 # text = Activation of the CD28 surface receptor provides a major costimulatory signal for T cell activation resulting in enhanced production of interleukin-2 (IL-2) and cell proliferation. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 5 surface surface NOUN NN Number=Sing _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 major major ADJ JJ Degree=Pos _ _ _ _ 10 costimulatory costimulatory NOUN NN Number=Sing _ _ _ _ 11 signal signal NOUN NN Number=Sing _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 resulting result VERB VBG VerbForm=Ger _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 production production NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 X LS _ _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 8038 # text = In primary T lymphocytes we show that CD28 ligation leads to the rapid intracellular formation of reactive oxygen intermediates (ROIs) which are required for CD28-mediated activation of the NF-kappa B/CD28-responsive complex and IL-2 expression. 1 In in ADP IN _ _ _ _ _ 2 primary primary ADJ JJ Degree=Pos _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 9 ligation ligation NOUN NN Number=Sing _ _ _ _ 10 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 14 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 15 formation formation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 18 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 19 intermediates intermediate NOUN NNS Number=Plur _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 ROIs ROI NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 CD28 CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 kappa kappa PROPN NNP Number=Sing _ _ _ _ 36 B/CD28 B/CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 -responsive -responsive ADJ JJ Degree=Pos _ _ _ _ 38 complex complex NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 2 2 NUM CD NumType=Card _ _ _ _ 43 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 8039 # text = Delineation of the CD28 signaling cascade was found to involve protein tyrosine kinase activity, followed by the activation of phospholipase A2 and 5-lipoxygenase. 1 Delineation Delineation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 5 signaling signaling NOUN NN Number=Sing _ _ _ _ 6 cascade cascade NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 involve involve VERB VB VerbForm=Inf _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 13 kinase kinase NOUN NN Number=Sing _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 phospholipase phospholipase NOUN NN Number=Sing _ _ _ _ 22 A2 A2 NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 lipoxygenase lipoxygenase NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 8040 # text = Our data suggest that lipoxygenase metabolites activate ROI formation which then induce IL-2 expression via NF-kappa B activation. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 lipoxygenase lipoxygenase NOUN NN Number=Sing _ _ _ _ 6 metabolites metabolite NOUN NNS Number=Plur _ _ _ _ 7 activate activate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 ROI Roi NUM CD NumType=Card _ _ _ _ 9 formation formation NOUN NN Number=Sing _ _ _ _ 10 which which PRON WDT PronType=Rel _ _ _ _ 11 then then ADV RB PronType=Dem _ _ _ _ 12 induce induce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 via via ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 8041 # text = These findings should be useful for therapeutic strategies and the development of immunosuppressants targeting the CD28 costimulatory pathway. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 should should AUX MD VerbForm=Fin _ _ _ _ 4 be be AUX VB VerbForm=Inf _ _ _ _ 5 useful useful ADJ JJ Degree=Pos _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 8 strategies strategy NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 development development NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 immunosuppressants immunosuppressant NOUN NNS Number=Plur _ _ _ _ 14 targeting target VERB VBG VerbForm=Ger _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 17 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 18 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8042 # text = Document 0030011298 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011298 0030011298 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8043 # text = CD2 signalling induces phosphorylation of CREB in primary lymphocytes. 1 CD2 CD2 NOUN NN Number=Sing _ _ _ _ 2 signalling signalling VERB VBG VerbForm=Ger _ _ _ _ 3 induces induce NOUN NNS Number=Plur _ _ _ _ 4 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 CREB CREB PROPN NNP Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 primary primary ADJ JJ Degree=Pos _ _ _ _ 9 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8044 # text = Promoter sequences responsive to cyclic AMP (cAMP) are found in a number of cellular genes, and bind transcription factors of the cAMP response element binding protein (CREB)/activating transcription factor-1 (ATF-1) family. 1 Promoter Promoter NOUN NN Number=Sing _ _ _ _ 2 sequences sequence NOUN NNS Number=Plur _ _ _ _ 3 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 cyclic cyclic ADJ JJ Degree=Pos _ _ _ _ 6 AMP Amp PROPN NNP Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 cAMP camp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 number number NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 cAMP camp PROPN NNP Number=Sing _ _ _ _ 26 response response NOUN NN Number=Sing _ _ _ _ 27 element element NOUN NN Number=Sing _ _ _ _ 28 binding bind VERB VBG VerbForm=Ger _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 / / PUNCT , _ _ _ _ SpaceAfter=No 34 activating activat VERB VBG VerbForm=Ger _ _ _ _ 35 transcription transcription NOUN NN Number=Sing _ _ _ _ 36 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 -1 -1 NUM CD NumType=Card _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 ATF Atf NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 8045 # text = We have used a human T-lymphotropic virus type 1 (HTLV-1) model of cAMP response element (CRE) transcription to investigate the influence of lymphocyte activation on transcription from homologous regions in the viral promoter. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 lymphotropic lymphotropic NOUN NN Number=Sing _ _ _ _ 8 virus virus NOUN NN Number=Sing _ _ _ _ 9 type type NOUN NN Number=Sing _ _ _ _ 10 1 1 NUM CD NumType=Card _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 model model NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 cAMP camp NOUN NN Number=Sing _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ _ 20 element element NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 CRE CRE NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 influence influence NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 31 activation activation NOUN NN Number=Sing _ _ _ _ 32 on on ADP IN _ _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 from from ADP IN _ _ _ _ _ 35 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 36 regions region NOUN NNS Number=Plur _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 viral viral ADJ JJ Degree=Pos _ _ _ _ 40 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 8046 # text = We previously demonstrated increased HTLV-1 transcription following CD2 but not CD3 receptor cross-linking. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 previously previously ADV RB _ _ _ _ _ 3 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 HTLV HTLV NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 following follow VERB VBG VerbForm=Ger _ _ _ _ 10 CD2 CD2 NOUN NN Number=Sing _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 CD3 CD3 NUM CD NumType=Card _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 -linking -link VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 8047 # text = We hypothesized that this increased viral transcription was mediated, in part, through the phosphorylation of CREB. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 hypothesized hypothesize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 viral viral ADJ JJ Degree=Pos _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 part part ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 through through ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 8048 # text = Therefore, we investigated CD2 and CD3 receptor-mediated signalling in primary human peripheral blood mononuclear cells (PBMC). 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 CD2 CD2 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 CD3 CD3 NUM CD NumType=Card _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 signalling signalling NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 primary primary ADJ JJ Degree=Pos _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 16 blood blood NOUN NN Number=Sing _ _ _ _ 17 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 PBMC PBMC NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 8049 # text = CD2, but not CD3, cross-linking increased cAMP detected by competitive enzyme-linked immunosorbent assay (ELISA) approximately fourfold. 1 CD2 Cd2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 but but CCONJ CC _ _ _ _ _ 4 not not ADV RB _ _ _ _ _ 5 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 cross cross VERB VB Mood=Imp|VerbForm=Fin _ _ _ SpaceAfter=No 8 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 9 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 cAMP camp NOUN NNS Number=Plur _ _ _ _ 11 detected detect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 competitive competitive ADJ JJ Degree=Pos _ _ _ _ 14 enzyme enzyme NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 immunosorbent immunosorbent ADJ JJ Degree=Pos _ _ _ _ 18 assay assay NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 ELISA ELISA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 approximately approximately ADV RB _ _ _ _ _ 23 fourfold fourfold VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 8050 # text = CD2 cross-linking concurrently increased phosphorylation of CREB detected by immunoblot assay eightfold. 1 CD2 CD2 NOUN NN Number=Sing _ _ _ _ 2 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 4 concurrently concurrently ADV RB _ _ _ _ _ 5 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 CREB CREB PROPN NNP Number=Sing _ _ _ _ 9 detected detect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 immunoblot immunoblot ADJ JJ Degree=Pos _ _ _ _ 12 assay assay NOUN NN Number=Sing _ _ _ _ 13 eightfold eightfold NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 8051 # text = Consistent with post-translational regulation, no change in total level of CREB protein was observed. 1 Consistent consistent ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 post post X AFX _ _ _ _ SpaceAfter=No 4 -translational -translational ADJ JJ Degree=Pos _ _ _ _ 5 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 no no DET DT _ _ _ _ _ 8 change change NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 total total ADJ JJ Degree=Pos _ _ _ _ 11 level level NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 CREB CREB NOUN NN Number=Sing _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 observed observed ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 8052 # text = Phosphorylation of CREB occurred through a herbimycin A and Rp-cAMP- sensitive pathway, suggesting phosphorylation required antecedent activation of both protein tyrosine kinases (PTK) and protein kinase A (PKA). 1 Phosphorylation Phosphorylation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 CREB CREB PROPN NNP Number=Sing _ _ _ _ 4 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 through through ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 herbimycin herbimycin NOUN NN Number=Sing _ _ _ _ 8 A a NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 Rp-cAMP Rp-camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ _ 12 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 13 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 16 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 17 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 antecedent antecedent ADJ JJ Degree=Pos _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 both both DET DT _ _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 24 kinases kinase NOUN NNS Number=Plur _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 PTK PTK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ _ 30 kinase kinase NOUN NN Number=Sing _ _ _ _ 31 A A PROPN NNP Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 PKA PKA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 8053 # text = Both CD2 and CD3 cross-linking increased binding of nuclear proteins to a radiolabelled CRE oligonucleotide probe in electrophoretic mobility shift assays suggesting that lymphocyte activation enhances binding independently of phosphorylation of CREB at serine 133. 1 Both both DET DT _ _ _ _ _ 2 CD2 CD2 NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 5 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 7 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 radiolabelled radiolabell VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 CRE Cre NOUN NN Number=Sing _ _ _ _ 16 oligonucleotide oligonucleotide NOUN NN Number=Sing _ _ _ _ 17 probe probe NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 20 mobility mobility NOUN NN Number=Sing _ _ _ _ 21 shift shift NOUN NN Number=Sing _ _ _ _ 22 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 lymphocyte lymphocyte ADJ JJ Degree=Pos _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 enhances enhance NOUN NNS Number=Plur _ _ _ _ 28 binding bind VERB VBG VerbForm=Ger _ _ _ _ 29 independently independently ADV RB _ _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 CREB CREB PROPN NNP Number=Sing _ _ _ _ 34 at at ADP IN _ _ _ _ _ 35 serine serine NOUN NN Number=Sing _ _ _ _ 36 133 133 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 8054 # text = These data indicate specific modulation of the CREB/ATF-1 family of transcription factors by the CD2 signalling pathway and suggest CD2 receptor modulation of CRE-mediated transcription following ligand engagement (e.g. cell-to-cell contact). 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 modulation modulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 10 ATF ATF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 family family NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factors factor NOUN NNS Number=Plur _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 CD2 Cd2 NOUN NN Number=Sing _ _ _ _ 20 signalling signalling VERB VBG VerbForm=Ger _ _ _ _ 21 pathway pathway NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 suggest suggest VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 24 CD2 CD2 NUM CD NumType=Card _ _ _ _ 25 receptor receptor NOUN NN Number=Sing _ _ _ _ 26 modulation modulation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 CRE CRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ _ 32 following follow VERB VBG VerbForm=Ger _ _ _ _ 33 ligand ligand NOUN NN Number=Sing _ _ _ _ 34 engagement engagement NOUN NN Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 e.g. e.g. X FW _ _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 to to ADP IN _ _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 cell cell NOUN NN Number=Sing _ _ _ _ 42 contact contact NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8055 # text = Document 0030011301 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011301 0030011301 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8056 # text = Human immunodeficiency virus type-1 transcription: role of the 5'-untranslated leader region (review). 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 3 virus virus NOUN NN Number=Sing _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 : : PUNCT : _ _ _ _ _ 9 role role NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ' ' NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 - - PUNCT : _ _ _ _ SpaceAfter=No 15 untranslated untranslated ADJ JJ Degree=Pos _ _ _ _ 16 leader leader NOUN NN Number=Sing _ _ _ _ 17 region region NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 review review NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8057 # text = Human immunodeficiency virus type-1 (HIV-1) transcription is dependent on the interaction of host-cell transcription factors with cis-regulatory DNA elements within the viral long terminal repeat (LTR). 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 3 virus virus NOUN NN Number=Sing _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 -1 -1 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 interaction interaction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 host host NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 27 DNA dna NOUN NN Number=Sing _ _ _ _ 28 elements element NOUN NNS Number=Plur _ _ _ _ 29 within within ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 viral viral ADJ JJ Degree=Pos _ _ _ _ 32 long long ADJ JJ Degree=Pos _ _ _ _ 33 terminal terminal NOUN NN Number=Sing _ _ _ _ 34 repeat repeat NOUN NN Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 8058 # text = Much attention has focused on the series of sequence elements upstream of the transcriptional initiation site in the U3 region of the LTR including the Sp1 and NF-kappaB binding sites. 1 Much much ADJ JJ Degree=Pos _ _ _ _ 2 attention attention NOUN NN Number=Sing _ _ _ _ 3 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 focused focus VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 series series NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 sequence sequence NOUN NN Number=Sing _ _ _ _ 10 elements element NOUN NNS Number=Plur _ _ _ _ 11 upstream upstream NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 15 initiation initiation NOUN NN Number=Sing _ _ _ _ 16 site site NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 U3 U3 NOUN NN Number=Sing _ _ _ _ 20 region region NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 LTR Ltr NOUN NN Number=Sing _ _ _ _ 24 including include VERB VBG VerbForm=Ger _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 31 binding binding VERB VBG VerbForm=Ger _ _ _ _ 32 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 8059 # text = Recent studies, however, demonstrate that the transcribed 5'-untranslated leader region (5'-UTR) also contains important transcriptional elements. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 however however ADV RB _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transcribed transcribe NOUN NN Number=Sing _ _ _ _ 10 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 '- '- PUNCT . _ _ _ _ SpaceAfter=No 12 untranslated untranslated ADJ JJ Degree=Pos _ _ _ _ 13 leader leader NOUN NN Number=Sing _ _ _ _ 14 region region NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 '- '- PUNCT . _ _ _ _ SpaceAfter=No 18 UTR Utr NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 also also ADV RB _ _ _ _ _ 21 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 important important ADJ JJ Degree=Pos _ _ _ _ 23 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 24 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8060 # text = These regulatory elements situated downstream of transcription interact with constitutive and inducible transcription factors, mediate transmission of cellular activation signals, and are important for efficient HIV-1 transcription and replication. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 3 elements element NOUN NNS Number=Plur _ _ _ _ 4 situated situate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 downstream downstream NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 interact interact NOUN NN Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 mediate mediate ADJ JJ Degree=Pos _ _ _ _ 17 transmission transmission NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 important important ADJ JJ Degree=Pos _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 28 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 8061 # text = The 5'-UTR contains binding sites for the transcription factors AP-1, NF-kappaB, NF-AT, IRF, and Sp1. Mutations in these binding sites can interfere with the viral response to cell activation signals, decrease LTR transcription, and inhibit viral replication. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 ' ' NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 UTR UTR PROPN NNP Number=Sing _ _ _ _ 6 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 sites site NOUN NNS Number=Plur _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 Sp1 sp1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ 30 Mutations Mutation NOUN NNS Number=Plur _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 33 binding binding ADJ JJ Degree=Pos _ _ _ _ 34 sites site NOUN NNS Number=Plur _ _ _ _ 35 can can AUX MD VerbForm=Fin _ _ _ _ 36 interfere interfere VERB VB VerbForm=Inf _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 viral viral ADJ JJ Degree=Pos _ _ _ _ 40 response response NOUN NN Number=Sing _ _ _ _ 41 to to PART TO _ _ _ _ _ 42 cell cell VERB VB VerbForm=Inf _ _ _ _ 43 activation activation NOUN NN Number=Sing _ _ _ _ 44 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 decrease decrease NOUN NN Number=Sing _ _ _ _ 47 LTR Ltr NOUN NN Number=Sing _ _ _ _ 48 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 inhibit inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 52 viral viral ADJ JJ Degree=Pos _ _ _ _ 53 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 8062 # text = The 5'-UTR also interacts with a specific nucleosome that is rapidly displaced during transcriptional activation of the latent provirus. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 ' ' NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 UTR UTR PROPN NNP Number=Sing _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 interacts interact VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 specific specific ADJ JJ Degree=Pos _ _ _ _ 11 nucleosome nucleosome NOUN NN Number=Sing _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 rapidly rapidly ADV RB _ _ _ _ _ 15 displaced displace VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 during during ADP IN _ _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 latent latent ADJ JJ Degree=Pos _ _ _ _ 22 provirus provirus NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 8063 # text = We propose that the inducible transcription factor binding sites in the 5'-UTR comprise a downstream enhancer domain that can function independent of, or in concert with, the LTR promoter to rapidly increase latent proviral transcription in response to cell activation signals. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 sites site NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 UTR UTR ADV RB _ _ _ _ _ 16 comprise comprise VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 19 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 20 domain domain NOUN NN Number=Sing _ _ _ _ 21 that that PRON WDT PronType=Rel _ _ _ _ 22 can can AUX MD VerbForm=Fin _ _ _ _ 23 function function VERB VB VerbForm=Inf _ _ _ _ 24 independent independent ADJ JJ Degree=Pos _ _ _ _ 25 of of ADP IN _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 concert concert NOUN NN Number=Sing _ _ _ _ 30 with with ADP IN _ _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 LTR LTR ADJ JJ Degree=Pos _ _ _ _ 34 promoter promoter NOUN NN Number=Sing _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 rapidly rapidly ADV RB _ _ _ _ _ 37 increase increase VERB VB VerbForm=Inf _ _ _ _ 38 latent latent ADJ JJ Degree=Pos _ _ _ _ 39 proviral proviral ADJ JJ Degree=Pos _ _ _ _ 40 transcription transcription NOUN NN Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 response response NOUN NN Number=Sing _ _ _ _ 43 to to PART TO _ _ _ _ _ 44 cell cell VERB VB VerbForm=Inf _ _ _ _ 45 activation activation NOUN NN Number=Sing _ _ _ _ 46 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 8064 # text = In this review, we describe the host-cell transcription factors that interact with the 5'-UTR and discuss their role in the transcriptional regulation of HIV-1 gene expression. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 review review NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 describe describe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 host host NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 interact interact VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ' 's NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 UTR UTR NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 discuss discuss VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 role role NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 28 regulation regulation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8065 # text = Document 0030011303 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011303 0030011303 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8066 # text = Regulation of M-CSF expression by M-CSF: role of protein kinase C and transcription factor NF kappa B. Macrophage-colony-stimulating factor (M-CSF), also referred to as CSF-1, regulates the survival, growth, differentiation and functional activity of monocytes by binding to a single class of high-affinity cell surface receptors, known to be the product of the c-fms protooncogene. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 CSF CSF NOUN NN Number=Sing _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 CSF CSF NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 : : PUNCT : _ _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 kinase kinase NOUN NN Number=Sing _ _ _ _ 16 C c NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 NF NF PROPN NNP Number=Sing _ _ _ _ 21 kappa kappa PROPN NNP Number=Sing _ _ _ _ 22 B. B. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n 23 Macrophage Macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 stimulating stimulating NOUN NN Number=Sing _ _ _ _ 28 factor factor NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 CSF Csf NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 also also ADV RB _ _ _ _ _ 36 referred refer VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 as as ADP IN _ _ _ _ _ 39 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 survival survival NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 functional functional ADJ JJ Degree=Pos _ _ _ _ 52 activity activity NOUN NN Number=Sing _ _ _ _ 53 of of ADP IN _ _ _ _ _ 54 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 55 by by SCONJ IN _ _ _ _ _ 56 binding bind VERB VBG VerbForm=Ger _ _ _ _ 57 to to ADP IN _ _ _ _ _ 58 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 59 single single ADJ JJ Degree=Pos _ _ _ _ 60 class class NOUN NN Number=Sing _ _ _ _ 61 of of ADP IN _ _ _ _ _ 62 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 63 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 64 affinity affinity NOUN NN Number=Sing _ _ _ _ 65 cell cell NOUN NN Number=Sing _ _ _ _ 66 surface surface NOUN NN Number=Sing _ _ _ _ 67 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 68 , , PUNCT , _ _ _ _ _ 69 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 70 to to PART TO _ _ _ _ _ 71 be be AUX VB VerbForm=Inf _ _ _ _ 72 the the DET DT Definite=Def|PronType=Art _ _ _ _ 73 product product NOUN NN Number=Sing _ _ _ _ 74 of of ADP IN _ _ _ _ _ 75 the the DET DT Definite=Def|PronType=Art _ _ _ _ 76 c- c- SYM SYM _ _ _ _ SpaceAfter=No 77 fms fm NOUN NNS Number=Plur _ _ _ _ 78 protooncogene protooncogene NOUN NN Number=Sing _ _ _ SpaceAfter=No 79 . . PUNCT . _ _ _ _ _ # sent_id = 8067 # text = The detection of both M-CSF and c-fms expression by cells of the monocyte lineage has suggested that M-CSF may act by an autocrine mechanism. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 detection detection NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 both both DET DT _ _ _ _ _ 5 M- M- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 CSF CSF NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 c- c- SYM NFP _ _ _ _ SpaceAfter=No 9 fms fm NOUN NNS Number=Plur _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 16 lineage lineage NOUN NN Number=Sing _ _ _ _ 17 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 suggested suggest VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 20 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 CSF Csf NOUN NN Number=Sing _ _ _ _ 23 may may AUX MD VerbForm=Fin _ _ _ _ 24 act act VERB VB VerbForm=Inf _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 autocrine autocrine NOUN NN Number=Sing _ _ _ _ 28 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 8068 # text = Interestingly, it has been shown that M-CSF can induce the expression of its own gene. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 4 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 6 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 M- M- NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 CSF CSF NOUN NN Number=Sing _ _ _ _ 10 can can AUX MD VerbForm=Fin _ _ _ _ 11 induce induce VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 own own ADJ JJ Degree=Pos _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 8069 # text = Although sensitivity to M-CSF can be modulated by regulation of receptor expression and function, M-CSF responsiveness is largely determined at a postreceptor level. 1 Although although SCONJ IN _ _ _ _ _ 2 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 M- M- PUNCT : _ _ _ _ SpaceAfter=No 5 CSF CSF PROPN NNP Number=Sing _ _ _ _ 6 can can AUX MD VerbForm=Fin _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 modulated modulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 regulation regulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 CSF Csf NOUN NN Number=Sing _ _ _ _ 20 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 largely largely ADV RB _ _ _ _ _ 23 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 at at ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 postreceptor postreceptor ADJ JJ Degree=Pos _ _ _ _ 27 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 8070 # text = To date, little is known about the intracellular pathway of M-CSF signal transduction. 1 To to ADP IN _ _ _ _ _ 2 date date NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 little little ADJ JJ Degree=Pos _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 about about ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 10 pathway pathway NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 M m PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 CSF CSF PROPN NNP Number=Sing _ _ _ _ 15 signal signal NOUN NN Number=Sing _ _ _ _ 16 transduction transduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 8071 # text = We have therefore investigated the changes in protein kinase C (PKC) activity upon exposure of monocytes to M-CSF. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 therefore therefore ADV RB _ _ _ _ _ 4 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 changes change NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 kinase kinase NOUN NN Number=Sing _ _ _ _ 10 C C PROPN NNP Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 upon upon ADP IN _ _ _ _ _ 16 exposure exposure NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 M m PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 8072 # text = We show that M-CSF activates and translocates PKC. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 CSF CSF NOUN NN Number=Sing _ _ _ _ 7 activates activate NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 translocates translocate NOUN NNS Number=Plur _ _ _ _ 10 PKC PKC NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 8073 # text = Inhibition of PKC by the isoquinoline derivative H7 abolishes induction of M-CSF by M-CSF. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 PKC PKC PROPN NNP Number=Sing _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 isoquinoline isoquinoline NOUN NN Number=Sing _ _ _ _ 7 derivative derivative NOUN NN Number=Sing _ _ _ _ 8 H7 H7 NUM CD NumType=Card _ _ _ _ 9 abolishes abolish NOUN NNS Number=Plur _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 M m PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 CSF CSF PROPN NNP Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 M m PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 8074 # text = Furthermore, activation of PKC was pertussis-toxin-sensitive and was associated with the detection of an NF kappa B protein in nuclear extracts of M-CSF-induced blood monocytes but not in monocytes exposed to medium treatment only. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 PKC PKC PROPN NNP Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 pertussis-toxin pertussis-toxin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 detection detection NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ _ 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 24 extracts extract NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 M- M- NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 CSF CSF NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 blood blood NOUN NN Number=Sing _ _ _ _ 31 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 32 but but CCONJ CC _ _ _ _ _ 33 not not PART RB _ _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 36 exposed expose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 to to PART TO _ _ _ _ _ 38 medium medium VERB VB VerbForm=Inf _ _ _ _ 39 treatment treatment NOUN NN Number=Sing _ _ _ _ 40 only only ADV RB _ _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 8075 # text = The results suggest that M-CSF induction of M-CSF involves G proteins, PKC and NF kappa B. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 CSF Csf NOUN NN Number=Sing _ _ _ _ 8 induction induction NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 CSF Csf NOUN NN Number=Sing _ _ _ _ 13 involves involf NOUN NNS Number=Plur _ _ _ _ 14 G g VERB VBG VerbForm=Ger _ _ _ _ 15 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 PKC PKC PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ _ 20 kappa kappa PROPN NNP Number=Sing _ _ _ _ 21 B. B. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8076 # text = Document 0030011305 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011305 0030011305 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8077 # text = T-cell expression of the human GATA-3 gene is regulated by a non-lineage-specific silencer. 1 T- T- SYM NFP _ _ _ _ SpaceAfter=No 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 3 3 NUM CD NumType=Card _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 non-lineage non-lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 silencer silencer NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8078 # text = The GATA-3 transcription factor is required for development of the T-cell lineage and Th2 cytokine gene expression in CD4 T-cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 3 3 NUM CD NumType=Card _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 development development NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 lineage lineage NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 Th2 Th2 NUM CD NumType=Card _ _ _ _ 18 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 23 T- T- PUNCT , _ _ _ _ SpaceAfter=No 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8079 # text = We have mapped the DNase-I-hypersensitive (HS) regions of the human GATA-3 gene in T-cells and non-T-cells and studied their transcriptional activities. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 mapped map VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 DNase DNase NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 HS h NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 regions region NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 3 3 NUM CD NumType=Card _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 non-T- non-t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 30 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 31 activities activity NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 8080 # text = HS I-III, located 5' from the transcriptional initiation site, were found in hematopoietic and non-hematopoietic cells, whereas HS IV-VII, located 3' from the transcriptional start site, were exclusively observed in T-cells. 1 HS h VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 2 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 3 - - SYM SYM _ _ _ _ SpaceAfter=No 4 III Iii NUM CD NumType=Card _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ' ' NOUN NNS Number=Plur _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 initiation initiation NOUN NN Number=Sing _ _ _ _ 13 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 non-hematopoietic non-hematopoietic ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 whereas whereas SCONJ IN _ _ _ _ _ 24 HS HS PROPN NNP Number=Sing _ _ _ _ 25 IV IV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 VII VII PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ' ' NOUN NNS Number=Plur _ _ _ _ 32 from from ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 35 start start NOUN NN Number=Sing _ _ _ _ 36 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 39 exclusively exclusively ADV RB _ _ _ _ _ 40 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 8081 # text = Among these hypersensitive sites, two transcriptional control elements were found, one in the first intron of the GATA-3 gene and the other between 8.3 and 5.9 kilobases 5' from the GATA-3 transcriptional initiation site. 1 Among among ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 4 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 two two NUM CD NumType=Card _ _ _ _ 7 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 8 control control NOUN NN Number=Sing _ _ _ _ 9 elements element NOUN NNS Number=Plur _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 one one NUM CD NumType=Card _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 17 intron intron NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 3 3 NUM CD NumType=Card _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 other other ADJ JJ Degree=Pos _ _ _ _ 27 between between ADP IN _ _ _ _ _ 28 8.3 8.3 NUM CD NumType=Card _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 5.9 5.9 NUM CD NumType=Card _ _ _ _ 31 kilobases kilobase NOUN NNS Number=Plur _ _ _ _ 32 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ' ' NOUN NNS Number=Plur _ _ _ _ 34 from from ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT , _ _ _ _ SpaceAfter=No 38 3 3 NUM CD NumType=Card _ _ _ _ 39 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 40 initiation initiation NOUN NN Number=Sing _ _ _ _ 41 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 8082 # text = The first intron acted as a strong transcriptional activator in a position-dependent manner and with no cell-type specificity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 intron intron NOUN NN Number=Sing _ _ _ _ 4 acted act VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 strong strong ADJ JJ Degree=Pos _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 activator activator NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 position position NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 manner manner NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 no no DET DT _ _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 type type NOUN NN Number=Sing _ _ _ _ 22 specificity specificity NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 8083 # text = The upstream regulatory element could confer T-cell specificity to the GATA-3 promoter activity, and analysis of this region revealed a 707-base pair silencer that drastically inhibited GATA-3 promoter activity in non-T-cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 3 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 4 element element NOUN NN Number=Sing _ _ _ _ 5 could could AUX MD VerbForm=Fin _ _ _ _ 6 confer confer VERB VB VerbForm=Inf _ _ _ _ 7 T- T- SYM NFP _ _ _ _ SpaceAfter=No 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 specificity specificity NOUN NN Number=Sing _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 3 3 NUM CD NumType=Card _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 analysis analysis NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 22 region region NOUN NN Number=Sing _ _ _ _ 23 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 707 707 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 -base -base NOUN NN Number=Sing _ _ _ _ 27 pair pair NOUN NN Number=Sing _ _ _ _ 28 silencer silencer NOUN NN Number=Sing _ _ _ _ 29 that that PRON WDT PronType=Rel _ _ _ _ 30 drastically drastically ADV RB _ _ _ _ _ 31 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 3 3 NUM CD NumType=Card _ _ _ _ 35 promoter promoter NOUN NN Number=Sing _ _ _ _ 36 activity activity NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 non-T- non-t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 8084 # text = Two CAGGTG E-boxes, located at the 5'- and 3'-ends of the silencer, were necessary for this silencer activity. 1 Two two NUM CD NumType=Card _ _ _ _ 2 CAGGTG Caggtg ADJ JJ Degree=Pos _ _ _ _ 3 E- E- NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 boxes box NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 at at ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ' ' NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 ends end NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 silencer silencer NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 25 silencer silencer NOUN NN Number=Sing _ _ _ _ 26 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 8085 # text = The 3'-CAGGTG E-box could bind USF proteins, the ubiquitous repressor ZEB, or the basic helix-loop-helix proteins E2A and HEB, and we showed that a competition between ZEB and E2A/HEB proteins is involved in the silencer activity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 ' ' NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 CAGGTG CAGGTG NOUN NN Number=Sing _ _ _ _ 6 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 box box NOUN NN Number=Sing _ _ _ _ 8 could could AUX MD VerbForm=Fin _ _ _ _ 9 bind bind VERB VB VerbForm=Inf _ _ _ _ 10 USF USF ADP RP _ _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 15 repressor repressor NOUN NN Number=Sing _ _ _ _ 16 ZEB ZEB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 basic basic ADJ JJ Degree=Pos _ _ _ _ 21 helix-loop helix-loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 helix helix NOUN NN Number=Sing _ _ _ _ 24 proteins protein NOUN NNS Number=Plur _ _ _ _ 25 E2A E2A PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 HEB HEB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 31 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 that that SCONJ IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 competition competition NOUN NN Number=Sing _ _ _ _ 35 between between ADP IN _ _ _ _ _ 36 ZEB ZEB PROPN NNP Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 E2A E2A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 / / PUNCT , _ _ _ _ SpaceAfter=No 40 HEB Heb PROPN NNP Number=Sing _ _ _ _ 41 proteins protein VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 42 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 43 involved involved ADJ JJ Degree=Pos _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 silencer silencer NOUN NN Number=Sing _ _ _ _ 47 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8086 # text = Document 0030011313 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011313 0030011313 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8087 # text = Negative transcriptional regulation of human interleukin 2 (IL-2) gene by glucocorticoids through interference with nuclear transcription factors AP-1 and NF-AT. 1 Negative negative ADJ JJ Degree=Pos _ _ _ _ 2 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 3 regulation regulation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 7 2 2 NUM CD NumType=Card _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 16 through through ADP IN _ _ _ _ _ 17 interference interference NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factors factor NOUN NNS Number=Plur _ _ _ _ 22 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8088 # text = IL-2 gene transcription is affected by several nuclear proteins. 1 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 several several ADJ JJ Degree=Pos _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 8089 # text = We asked whether dexamethasone (Dex) and cyclosporin A (CsA) inhibit IL-2 gene transcription by interfering with the activity of nuclear proteins that bind to the IL-2 promoter. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 asked ask VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 dexamethasone dexamethasone PROPN NNP Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 Dex Dex PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 cyclosporin cyclosporin PROPN NNP Number=Sing _ _ _ _ 10 A a PROPN NNP Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 inhibit inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 by by SCONJ IN _ _ _ _ _ 21 interfering interfere VERB VBG VerbForm=Ger _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 27 proteins protein NOUN NNS Number=Plur _ _ _ _ 28 that that PRON WDT PronType=Rel _ _ _ _ 29 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 2 2 NUM CD NumType=Card _ _ _ _ 35 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 8090 # text = Nuclear extracts from primary human T lymphocytes were analyzed by electrophoretic DNA mobility shift assays. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 extracts extract NOUN NNS Number=Plur _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 primary primary ADJ JJ Degree=Pos _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 mobility mobility NOUN NN Number=Sing _ _ _ _ 14 shift shift NOUN NN Number=Sing _ _ _ _ 15 assays assays NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 8091 # text = Both Dex and CsA inhibited the binding of transcription factors AP-1 and NF-AT, but not of NF-kB and OCT-1/OAF, to their corresponding sites on the IL-2 gene promoter. 1 Both both CCONJ CC _ _ _ _ _ 2 Dex Dex PROPN NNP Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 CsA csa PROPN NNP Number=Sing _ _ _ _ 5 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 binding binding NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ _ 11 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 AT at PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 not not ADV RB _ _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kB kb PROPN NNP Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 OCT Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 30 OAF Oaf NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 34 corresponding corresponding NOUN NN Number=Sing _ _ _ _ 35 sites site NOUN NNS Number=Plur _ _ _ _ 36 on on ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 2 2 NUM CD NumType=Card _ _ _ _ 41 gene gene NOUN NN Number=Sing _ _ _ _ 42 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 8092 # text = To correlate changes in nuclear factor binding in vitro with transcriptional activity in vivo and define the structural requirements for IL-2 promoter repression, we used transient DNA transfections. 1 To to ADP IN _ _ _ _ _ 2 correlate correlate ADJ JJ Degree=Pos _ _ _ _ 3 changes change NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 vitro vitro NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 vivo vivo NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 define define VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 structural structural ADJ JJ Degree=Pos _ _ _ _ 19 requirements requirement NOUN NNS Number=Plur _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ _ 24 promoter promoter NOUN NN Number=Sing _ _ _ _ 25 repression repression NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 28 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 transient transient ADJ JJ Degree=Pos _ _ _ _ 30 DNA dna NOUN NN Number=Sing _ _ _ _ 31 transfections transfection NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 8093 # text = Jurkat cells were transfected with plasmids containing either the intact IL-2 promoter or its AP-1, NF-AT, and NF-kB motifs. 1 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 transfected transfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 7 containing contain VERB VBG VerbForm=Ger _ _ _ _ 8 either either CCONJ CC _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 intact intact NOUN NN Number=Sing _ _ _ _ 11 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 or or CCONJ CC _ _ _ _ _ 16 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 17 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kB kb PROPN NNP Number=Sing _ _ _ _ 29 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 8094 # text = Dex inhibited the IL-2 promoter and the AP-1, but not the NF-AT and NF-kB plasmids. 1 Dex Dex PROPN NNP Number=Sing _ _ _ _ 2 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 promoter promoter NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 not not ADV RB _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 AT at PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kB kb PROPN NNP Number=Sing _ _ _ _ 24 plasmids plasmid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8095 # text = In contrast, CsA inhibited the IL-2 promoter and the NF-AT, but not the AP-1 and NF-kB plasmids. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 CsA csa PROPN NNP Number=Sing _ _ _ _ 5 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 AT at PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 not not ADV RB _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kB kb NOUN NN Number=Sing _ _ _ _ 27 plasmids plasmid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 8096 # text = These results suggest that in human T lymphocytes both Dex and CsA inhibited IL-2 gene transcription through interference with transcription factors AP-1 and NF-AT. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 9 both both CCONJ CC _ _ _ _ _ 10 Dex Dex PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 CsA csa PROPN NNP Number=Sing _ _ _ _ 13 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 through through ADP IN _ _ _ _ _ 20 interference interference NOUN NN Number=Sing _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 factors factor NOUN NNS Number=Plur _ _ _ _ 24 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 AT at PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 8097 # text = We propose that, while maximum inhibition may involve interaction with both transcription factors, AP-1 is the primary target of Dex. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 while while SCONJ IN _ _ _ _ _ 6 maximum maximum ADJ JJ Degree=Pos _ _ _ _ 7 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 8 may may AUX MD VerbForm=Fin _ _ _ _ 9 involve involve VERB VB VerbForm=Inf _ _ _ _ 10 interaction interaction NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 both both DET DT _ _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 primary primary ADJ JJ Degree=Pos _ _ _ _ 22 target target NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 Dex Dex PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8098 # text = Document 0030011325 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011325 0030011325 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8099 # text = Analysis of the ligand-binding domain of human retinoic acid receptor alpha by site-directed mutagenesis. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 binding binding VERB VBG VerbForm=Ger _ _ _ _ 7 domain domain NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 11 acid acid ADJ JJ Degree=Pos _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8100 # text = Three subtypes of retinoic acid receptors (RAR), termed RAR alpha, RAR beta, and RAR gamma, have been described. 1 Three three NUM CD NumType=Card _ _ _ _ 2 subtypes subtype NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 5 acid acid ADJ JJ Degree=Pos _ _ _ _ 6 receptors receptor NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 RAR RAR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 RAR RAR ADP IN _ _ _ _ _ 13 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 RAR RAR PROPN NNP Number=Sing _ _ _ _ 16 beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 RAR RAR PROPN NNP Number=Sing _ _ _ _ 20 gamma gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 24 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8101 # text = They are composed of different structural domains, including distinct domains for DNA and ligand binding. 1 They they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 different different ADJ JJ Degree=Pos _ _ _ _ 6 structural structural ADJ JJ Degree=Pos _ _ _ _ 7 domains domains NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 including include VERB VBG VerbForm=Ger _ _ _ _ 10 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 11 domains domain NOUN NNS Number=Plur _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 DNA dna NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 ligand ligand NOUN NN Number=Sing _ _ _ _ 16 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 8102 # text = RARs specifically bind all-trans-retinoic acid (RA), 9-cis-RA, and retinoid analogs. 1 RARs RAR NOUN NNS Number=Plur _ _ _ _ 2 specifically specifically ADV RB _ _ _ _ _ 3 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 all all DET DT _ _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 9 acid acid NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 9- 9- SYM SYM _ _ _ _ SpaceAfter=No 15 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 RA Ra NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 retinoid retinoid ADJ JJ Degree=Pos _ _ _ _ 21 analogs analog NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 8103 # text = In this study, we examined the functional role of cysteine and arginine residues in the ligand-binding domain of hRAR alpha (hRAR alpha-LBD, amino acids 154 to 462). 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 functional functional ADJ JJ Degree=Pos _ _ _ _ 9 role role NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 arginine arginine NUM CD NumType=Card _ _ _ _ 14 residues residue NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 domain domain NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 hRAR hRAR NOUN NN Number=Sing _ _ _ _ 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 hRAR hRAR NOUN NN Number=Sing _ _ _ _ 26 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 LBD lbd NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 amino amino DET DT _ _ _ _ _ 31 acids acid NOUN NNS Number=Plur _ _ _ _ 32 154 154 NUM CD NumType=Card _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 462 462 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 8104 # text = All conserved cysteine and arginine residues in this domain were mutated by site-directed mutagenesis, and the mutant proteins were characterized by blocking reactions, ligand-binding experiments, transactivation assays, and protease mapping. 1 All all DET DT _ _ _ _ _ 2 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 arginine arginine NOUN NN Number=Sing _ _ _ _ 6 residues residue NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 9 domain domain NOUN NN Number=Sing _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 mutated mutate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 21 proteins protein NOUN NNS Number=Plur _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 characterized characterize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 by by SCONJ IN _ _ _ _ _ 25 blocking block VERB VBG VerbForm=Ger _ _ _ _ 26 reactions reaction NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 binding binding VERB VBG VerbForm=Ger _ _ _ _ 31 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 34 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 protease protease NOUN NN Number=Sing _ _ _ _ 38 mapping mapping NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 8105 # text = Changes of any cysteine residue of the hRAR alpha-LBD had no significant influence on the binding of all-trans RA or 9-cis RA. 1 Changes change NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 any any DET DT _ _ _ _ _ 4 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 5 residue residue NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 hRAR hRAR PROPN NNP Number=Sing _ _ _ _ 9 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 LBD LBD PROPN NNP Number=Sing _ _ _ _ 12 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 no no DET DT _ _ _ _ _ 14 significant significant ADJ JJ Degree=Pos _ _ _ _ 15 influence influence NOUN NN Number=Sing _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 binding binding NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 all all DET DT _ _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 trans tran NOUN NNS Number=Plur _ _ _ _ 23 RA RA NOUN NN Number=Sing _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 cis cis NOUN NN Number=Sing _ _ _ _ 28 RA Ra NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 8106 # text = Interestingly, residue C-235 is specifically important in antagonist binding. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 residue residue VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 235 235 NUM CD NumType=Card _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 specifically specifically ADV RB _ _ _ _ _ 9 important important ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 antagonist antagonist ADJ JJ Degree=Pos _ _ _ _ 12 binding binding NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 8107 # text = With respect to arginine residues, only the two single mutations of R-276 and R-394 to alanine showed a dramatic decrease of agonist and antagonist binding whereas the R272A mutation showed only a slight effect. 1 With with ADP IN _ _ _ _ _ 2 respect respect NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 arginine arginine VERB VB VerbForm=Inf _ _ _ _ 5 residues residue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 only only ADV RB _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 two two NUM CD NumType=Card _ _ _ _ 10 single single ADJ JJ Degree=Pos _ _ _ _ 11 mutations mutation NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 R- R- SYM SYM _ _ _ _ SpaceAfter=No 14 276 276 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 R- R- SYM SYM _ _ _ _ SpaceAfter=No 17 394 394 NUM CD NumType=Card _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 alanine alanine NUM CD NumType=Card _ _ _ _ 20 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 dramatic dramatic ADJ JJ Degree=Pos _ _ _ _ 23 decrease decrease NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 agonist agonist NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 antagonist antagonist NOUN NN Number=Sing _ _ _ _ 28 binding bind VERB VBG VerbForm=Ger _ _ _ _ 29 whereas whereas SCONJ IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 R272 R272 NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 mutation mutation NOUN NN Number=Sing _ _ _ _ 34 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 only only ADV RB _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 slight slight ADJ JJ Degree=Pos _ _ _ _ 38 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 8108 # text = For all other arginine mutations, no differences in affinity were detectable. 1 For for ADP IN _ _ _ _ _ 2 all all DET DT _ _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 arginine arginine NOUN NN Number=Sing _ _ _ _ 5 mutations mutation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 no no DET DT _ _ _ _ _ 8 differences difference NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 affinity affinity NOUN NN Number=Sing _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 detectable detectable ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 8109 # text = The two mutations R217A and R294A caused an increased binding efficiency for antagonists but no change in agonist binding. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 mutations mutation NOUN NNS Number=Plur _ _ _ _ 4 R217A R217A PROPN NNP Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 R294 R294 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 A A PROPN NNP Number=Sing _ _ _ _ 8 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 efficiency efficiency NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 antagonists antagonist NOUN NNS Number=Plur _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 no no DET DT _ _ _ _ _ 17 change change NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 agonist agonist ADJ JJ Degree=Pos _ _ _ _ 20 binding binding NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 8110 # text = From these results, we can conclude that electrostatic interactions of retinoids with the RAR alpha-LBD play a significant role in ligand binding. 1 From from ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 results result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 can can AUX MD VerbForm=Fin _ _ _ _ 7 conclude conclude VERB VB VerbForm=Inf _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 electrostatic electrostatic ADJ JJ Degree=Pos _ _ _ _ 10 interactions interaction NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 retinoids retinoid NOUN NNS Number=Plur _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 RAR RAR PROPN NNP Number=Sing _ _ _ _ 16 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 LBD lbd PROPN NNP Number=Sing _ _ _ _ 19 play play VERB VB VerbForm=Inf _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 significant significant ADJ JJ Degree=Pos _ _ _ _ 22 role role NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 ligand ligand NOUN NN Number=Sing _ _ _ _ 25 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 8111 # text = In addition, antagonists show distinctly different requirements for efficient binding, which may contribute to their interference in the ligand-inducible transactivation function of RAR alpha. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 antagonists antagonist NOUN NNS Number=Plur _ _ _ _ 5 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 distinctly distinctly ADV RB _ _ _ _ _ 7 different different ADJ JJ Degree=Pos _ _ _ _ 8 requirements requirement NOUN NNS Number=Plur _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 11 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 which which PRON WDT PronType=Int _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 interference interference NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 24 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 25 function function NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 RAR RAR PROPN NNP Number=Sing _ _ _ _ 28 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8112 # text = Document 0030011326 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011326 0030011326 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8113 # text = Nuclear Rel-A and c-Rel protein complexes are differentially distributed within human thymocytes. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 A a NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 Rel Rel NOUN NN Number=Sing _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 complexes complex NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 differentially differentially ADV RB _ _ _ _ _ 13 distributed distribute VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 within within ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8114 # text = Nuclear factor-kappa B (NF-kappa B)/Rel proteins are inducible transcriptional regulators of numerous cellular genes. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 Rel Rel NOUN NN Number=Sing _ _ _ _ 14 proteins protein NOUN NNS Number=Plur _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 regulators regulator NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 numerous numerous ADJ JJ Degree=Pos _ _ _ _ 21 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 22 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 8115 # text = They are particularly abundant in lymphoid tissues and are thought to be critical for the transcription of genes involved in immune and inflammatory responses. 1 They they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 particularly particularly ADV RB _ _ _ _ _ 4 abundant abundant ADJ JJ Degree=Pos _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 7 tissues tissue NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 critical critical ADJ JJ Degree=Pos _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 genes gene NOUN NNS Number=Plur _ _ _ _ 19 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 immune immune ADJ JJ Degree=Pos _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 24 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8116 # text = We have reported previously that a nuclear NF-kappa B activity was present in freshly extracted human thymocytes in the absence of in vitro treatment of these cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 reported report VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 previously previously ADV RB _ _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 present present ADJ JJ Degree=Pos _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 freshly freshly ADV RB _ _ _ _ _ 17 extracted extract VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 absence absence NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 26 treatment treatment NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 8117 # text = In the present report, we identified NF-kappa B proteins extracted from human thymocyte nuclei as being p50/p65 and p50/c-Rel complexes. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B b PROPN NNP Number=Sing _ _ _ _ 12 proteins protein NOUN NNS Number=Plur _ _ _ _ 13 extracted extract VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 thymocyte thymocyte NOUN NN Number=Sing _ _ _ _ 17 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 18 as as SCONJ IN _ _ _ _ _ 19 being be AUX VBG VerbForm=Ger _ _ _ _ 20 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 p65 p65 NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 p50/c p50/c NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 Rel Rel NOUN NN Number=Sing _ _ _ _ 27 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 8118 # text = Immunochemical and immunofluorescent staining of thymus sections using specific 1 Immunochemical Immunochemical ADJ JJ Degree=Pos _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 immunofluorescent immunofluorescent ADJ JJ Degree=Pos _ _ _ _ 4 staining staining VERB VBG VerbForm=Ger _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 thymus thymus NOUN NN Number=Sing _ _ _ _ 7 sections section NOUN NNS Number=Plur _ _ _ _ 8 using use VERB VBG VerbForm=Ger _ _ _ _ 9 specific specific ADJ JJ Degree=Pos _ _ _ _ # sent_id = 8119 # text = Abs allowed visualization of nuclear NF-kappa B proteins in both thymocytes and nonthymocyte cells. 1 Abs Abs ADV RB _ _ _ _ _ 2 allowed allow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 visualization visualization NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B b PROPN NNP Number=Sing _ _ _ _ 10 proteins protein VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 both both DET DT _ _ _ _ _ 13 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 nonthymocyte nonthymocyte ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 8120 # text = This detection suggested a preferential activation of p50/c-Rel in medullary thymocytes, whereas p50/p65 was present in both cortical and medullary regions of human thymus lobules. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 detection detection NOUN NN Number=Sing _ _ _ _ 3 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 preferential preferential ADJ JJ Degree=Pos _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 p50/c p50/c NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 Rel Rel NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 medullary medullary ADJ JJ Degree=Pos _ _ _ _ 13 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 whereas whereas SCONJ IN _ _ _ _ _ 16 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 p65 p65 NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 present present ADJ JJ Degree=Pos _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 both both CCONJ CC _ _ _ _ _ 23 cortical cortical ADJ JJ Degree=Pos _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 medullary medullary ADJ JJ Degree=Pos _ _ _ _ 26 regions region NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 thymus thymus NOUN NN Number=Sing _ _ _ _ 30 lobules lobule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 8121 # text = However, the intensity of p65 labeling was much higher in several thymocytes from the medulla. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 intensity intensity NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 p65 p65 NUM CD NumType=Card _ _ _ _ 7 labeling labeling NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 much much ADV RB _ _ _ _ _ 10 higher higher ADJ JJR Degree=Cmp _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 several several ADJ JJ Degree=Pos _ _ _ _ 13 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 medulla. medulla. NOUN NN Number=Sing _ _ _ _ # sent_id = 8122 # text = p65, p50, and c-Rel activities were found in both CD4- and CD8-positive thymocytes. 1 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 Rel Rel NOUN NN Number=Sing _ _ _ _ 9 activities activity NOUN NNS Number=Plur _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 both both DET DT _ _ _ _ _ 14 CD4 CD4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 CD8 Cd8 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 positive positive ADJ JJ Degree=Pos _ _ _ _ 20 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 8123 # text = These observations suggest that p65 and c-Rel complexes play distinct roles in gene expression and that both forms of NF-kappa B play critical roles during late stages of the intrathymic maturation of T cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 p65 p65 NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Rel Rel NOUN NN Number=Sing _ _ _ _ 10 complexes complex NOUN NNS Number=Plur _ _ _ _ 11 play play VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 13 roles role NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 gene gene ADJ JJ Degree=Pos _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 both both DET DT _ _ _ _ _ 20 forms form NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ 25 B b PROPN NNP Number=Sing _ _ _ _ 26 play play VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 critical critical ADJ JJ Degree=Pos _ _ _ _ 28 roles role NOUN NNS Number=Plur _ _ _ _ 29 during during ADP IN _ _ _ _ _ 30 late late ADJ JJ Degree=Pos _ _ _ _ 31 stages stage NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 intrathymic intrathymic ADJ JJ Degree=Pos _ _ _ _ 35 maturation maturation NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 T t PROPN NNP Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8124 # text = Document 0030011328 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011328 0030011328 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8125 # text = Abundant expression of erythroid transcription factor P45 NF-E2 mRNA in human peripheral granurocytes. 1 Abundant Abundant ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 P45 P45 PROPN NNP Number=Sing _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 E2 E2 NUM CD NumType=Card _ _ _ _ 11 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 15 granurocytes granurocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8126 # text = Transcription factor NF-E2 is crucial for regulation of erythroid-specific gene expression. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 E2 e2 NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 regulation regulation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 8127 # text = p45 subunit of NF-E2 contains a basic-leucine zipper domain and dimerizes with the small Maf family protein to form functional NF-E2 complex. 1 p45 p45 NUM CD NumType=Card _ _ _ _ 2 subunit subunit NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 E2 e2 NOUN NN Number=Sing _ _ _ _ 7 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 basic basic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 leucine leucine NOUN NN Number=Sing _ _ _ _ 12 zipper zipper NOUN NN Number=Sing _ _ _ _ 13 domain domain NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 dimerizes dimerize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 small small ADJ JJ Degree=Pos _ _ _ _ 19 Maf Maf NOUN NN Number=Sing _ _ _ _ 20 family family NOUN NN Number=Sing _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 form form VERB VB VerbForm=Inf _ _ _ _ 24 functional functional ADJ JJ Degree=Pos _ _ _ _ 25 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 E2 e2 NOUN NN Number=Sing _ _ _ _ 28 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 8128 # text = While p45 expression was shown to be restricted to erythroid cells, megakaryocytes and mast cells in hematopoietic lineage, we found in this study that p45 mRNA is abundantly transcribed in the granulocyte fraction of human peripheral blood cells. 1 While while SCONJ IN _ _ _ _ _ 2 p45 p45 NUM CD NumType=Card _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 restricted restrict VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 erythroid erythroid VERB VB VerbForm=Inf _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 megakaryocytes megakaryocyte NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 mast mast ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 19 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 22 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 25 study study NOUN NN Number=Sing _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 p45 p45 NUM CD NumType=Card _ _ _ _ 28 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 abundantly abundantly ADV RB _ _ _ _ _ 31 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 granulocyte granulocyte NOUN NN Number=Sing _ _ _ _ 35 fraction fraction NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 human human ADJ JJ Degree=Pos _ _ _ _ 38 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 39 blood blood NOUN NN Number=Sing _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 8129 # text = As neutrophils occupy approximately 92% of the cells in granulocyte fraction of human peripheral blood cells. 1 As as SCONJ IN _ _ _ _ _ 2 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 3 occupy occupy VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 approximately approximately ADV RB _ _ _ _ _ 5 92 92 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 % % SYM NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 granulocyte granulocyte NOUN NN Number=Sing _ _ _ _ 12 fraction fraction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 16 blood blood NOUN NN Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 8130 # text = As neutrophils occupy approximately 92% of the cells in this fraction, the cells expressing p45 is most likely to be neutrophils. 1 As as SCONJ IN _ _ _ _ _ 2 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 3 occupy occupy VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 approximately approximately ADV RB _ _ _ _ _ 5 92 92 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 % % SYM NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 12 fraction fraction NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 17 p45 p45 NUM CD NumType=Card _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 most most ADV RBS _ _ _ _ _ 20 likely likely ADJ JJ Degree=Pos _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 8131 # text = p45 mRNA is also expressed in HL-60 promyelocytes, albeit the expression level is much lower than that of the granulocyte fraction. 1 p45 p45 NUM CD NumType=Card _ _ _ _ 2 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 60 60 NUM CD NumType=Card _ _ _ _ 10 promyelocytes promyelocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 albeit albeit SCONJ IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 level level NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 much much ADV RB _ _ _ _ _ 18 lower lower ADJ JJR Degree=Cmp _ _ _ _ 19 than than ADP IN _ _ _ _ _ 20 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 granulocyte granulocyte ADJ JJ Degree=Pos _ _ _ _ 24 fraction fraction NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8132 # text = HL-60 cells were found to express mafK mRNA, indicating the presence of genuine NF-E2 complex in the cells. 1 HL Hl INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 60 60 NUM CD NumType=Card _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 express express VERB VB VerbForm=Inf _ _ _ _ 9 mafK mafK PROPN NNP Number=Sing _ _ _ _ 10 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 presence presence NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 genuine genuine PROPN NNP Number=Sing _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 E2 e2 NUM CD NumType=Card _ _ _ _ 20 complex complex NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 8133 # text = Although p45 mRNA is transcribed from two different promoters, aNF-E2 promoter and fNF-E2 promoter, in erythroid and megakaryocytic lineage cells, p45 mRNA is transcribed only from aNF-E2 promoter. 1 Although although SCONJ IN _ _ _ _ _ 2 p45 p45 PROPN NNP Number=Sing _ _ _ _ 3 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 different different ADJ JJ Degree=Pos _ _ _ _ 9 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 aNF anf NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 E2 e2 NUM CD NumType=Card _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 fNF fnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 E2 e2 NUM CD NumType=Card _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 25 lineage lineage NOUN NN Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 p45 p45 NUM CD NumType=Card _ _ _ _ 29 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 only only ADV RB _ _ _ _ _ 33 from from ADP IN _ _ _ _ _ 34 aNF aNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 E2 E2 NUM CD NumType=Card _ _ _ _ 37 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 8134 # text = The expression of p45 megakaryocytic lineage cells, p45 mRNA is transcribed only from aNF-E2 promoter. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p45 p45 NUM CD NumType=Card _ _ _ _ 5 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 6 lineage lineage NOUN NN Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 p45 p45 NUM CD NumType=Card _ _ _ _ 10 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 only only ADV RB _ _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 aNF aNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 E2 E2 NUM CD NumType=Card _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 8135 # text = The expression of p45 mRNA in the neutrophils declined rapidly after transfer of the cells to in vitro culture and G-CSF could not sustain the expression from the down-regulation, suggesting the E2 may also participate in the regulation of neutrophil-specific gene expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p45 p45 NUM CD NumType=Card _ _ _ _ 5 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 9 declined decline VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 rapidly rapidly ADV RB _ _ _ _ _ 11 after after ADP IN _ _ _ _ _ 12 transfer transfer NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 19 culture culture NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 G- g- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 CSF Csf NOUN NN Number=Sing _ _ _ _ 23 could could AUX MD VerbForm=Fin _ _ _ _ 24 not not PART RB _ _ _ _ _ 25 sustain sustain VERB VB VerbForm=Inf _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 from from ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 down down NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 E2 e2 NOUN NN Number=Sing _ _ _ _ 37 may may AUX MD VerbForm=Fin _ _ _ _ 38 also also ADV RB _ _ _ _ _ 39 participate participate VERB VB VerbForm=Inf _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 regulation regulation NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 neutrophil neutrophil ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 45 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 46 gene gene NOUN NN Number=Sing _ _ _ _ 47 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8136 # text = Document 0030011338 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011338 0030011338 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8137 # text = Jak3 is associated with CD40 and is critical for CD40 induction of gene expression in B cells. 1 Jak3 Jak3 NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 critical critical ADJ JJ Degree=Pos _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 CD40 CD40 NUM CD NumType=Card _ _ _ _ 11 induction induction NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 B b ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8138 # text = CD40 is a receptor that is critical for the survival, growth, differentiation, and isotype switching of B lymphocytes. 1 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 critical critical ADJ JJ Degree=Pos _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 survival survival NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 isotype isotype ADJ JJ Degree=Pos _ _ _ _ 18 switching switching NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 B b ADJ JJ Degree=Pos _ _ _ _ 21 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 8139 # text = Although CD40 lacks intrinsic tyrosine kinase activity, its ligation induces protein tyrosine phosphorylation, which is necessary for several CD40-mediated events. 1 Although although SCONJ IN _ _ _ _ _ 2 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 3 lacks lack VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 intrinsic intrinsic ADJ JJ Degree=Pos _ _ _ _ 5 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 6 kinase kinase NOUN NN Number=Sing _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 10 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 ligation ligation NOUN NN Number=Sing _ _ _ _ 12 induces induce NOUN NNS Number=Plur _ _ _ _ 13 protein protein VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 tyrosine tyrosine ADJ JJ Degree=Pos _ _ _ _ 15 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 several several ADJ JJ Degree=Pos _ _ _ _ 22 CD40 CD40 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 events event NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 8140 # text = We show that engagement of CD40 induces tyrosine phosphorylation and activation of Jak3 as well as of STAT3. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 engagement engagement NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 CD40 CD40 NUM CD NumType=Card _ _ _ _ 7 induces induce NOUN NNS Number=Plur _ _ _ _ 8 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 9 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Jak3 Jak3 NOUN NN Number=Sing _ _ _ _ 14 as as ADV RB _ _ _ _ _ 15 well well ADV RB Degree=Pos _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 STAT3 STAT3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 8141 # text = Jak3 is constitutively associated with CD40, and this interaction requires a proline-rich sequence in the membrane-proximal region of CD40. 1 Jak3 Jak3 NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 constitutively constitutively ADV RB _ _ _ _ _ 4 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 10 interaction interaction NOUN NN Number=Sing _ _ _ _ 11 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 proline proline NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 rich rich ADJ JJ Degree=Pos _ _ _ _ 16 sequence sequence NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 membrane membrane NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 proximal proximal NOUN NN Number=Sing _ _ _ _ 22 region region NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8142 # text = Deletion of this sequence abolishes the capacity of CD40 to induce expression of CD23, ICAM-1, and lymphotoxin-alpha genes in B cells. 1 Deletion Deletion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 sequence sequence NOUN NN Number=Sing _ _ _ _ 5 abolishes abolish VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 capacity capacity NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 induce induce VERB VB VerbForm=Inf _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 CD23 CD23 NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 lymphotoxin lymphotoxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 genes gene NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 B b ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 8143 # text = These results indicate that signaling through Jak3 is activated by CD40 and plays an important role in CD40-mediated functions. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 6 through through ADP IN _ _ _ _ _ 7 Jak3 Jak3 NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 important important ADJ JJ Degree=Pos _ _ _ _ 16 role role NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 functions function NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8144 # text = Document 0030011339 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011339 0030011339 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8145 # text = Thymocyte-thymic epithelial cell interaction leads to high-level replication of human immunodeficiency virus exclusively in mature CD4(+) CD8(-) CD3(+) thymocytes: a critical role for tumor necrosis factor and interleukin-7. 1 Thymocyte Thymocyte X ADD _ _ _ _ SpaceAfter=No 2 -thymic -thymic ADJ JJ Degree=Pos _ _ _ _ 3 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 interaction interaction NOUN NN Number=Sing _ _ _ _ 6 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 level level NOUN NN Number=Sing _ _ _ _ 11 replication replication NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 15 virus virus NOUN NN Number=Sing _ _ _ _ 16 exclusively exclusively ADV RB _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 mature mature ADJ JJ Degree=Pos _ _ _ _ 19 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 + + SYM SYM _ _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 CD8 CD8 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 (-) (-) PUNCT . _ _ _ _ _ 25 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 +) +) PUNCT -RRB- _ _ _ _ _ 28 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 : : PUNCT : _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 critical critical ADJ JJ Degree=Pos _ _ _ _ 32 role role NOUN NN Number=Sing _ _ _ _ 33 for for ADP IN _ _ _ _ _ 34 tumor tumor NOUN NN Number=Sing _ _ _ _ 35 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 36 factor factor NOUN NN Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8146 # text = This work aims at identifying the thymocyte subpopulation able to support human immunodeficiency virus (HIV) replication under the biological stimuli of the thymic microenvironment. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 work work NOUN NN Number=Sing _ _ _ _ 3 aims aim VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 at at SCONJ IN _ _ _ _ _ 5 identifying identify VERB VBG VerbForm=Ger _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 thymocyte thymocyte NOUN NN Number=Sing _ _ _ _ 8 subpopulation subpopulation NOUN NN Number=Sing _ _ _ _ 9 able able ADJ JJ Degree=Pos _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 support support VERB VB VerbForm=Inf _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 14 virus virus NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 replication replication NOUN NN Number=Sing _ _ _ _ 19 under under ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 biological biological ADJ JJ Degree=Pos _ _ _ _ 22 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 thymic thymic ADJ JJ Degree=Pos _ _ _ _ 26 microenvironment microenvironment NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 8147 # text = In this report we demonstrate that interaction with thymic epithelial cells (TEC) induces a high-level replication of the T-tropic primary isolate HIV-1(B-LAIp) exclusively in the mature CD4(+) CD8(-) CD3(+) thymocytes. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 interaction interaction NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 thymic thymic ADJ JJ Degree=Pos _ _ _ _ 10 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 TEC Tec NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 level level NOUN NN Number=Sing _ _ _ _ 20 replication replication NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 tropic tropic ADJ JJ Degree=Pos _ _ _ _ 25 primary primary ADJ JJ Degree=Pos _ _ _ _ 26 isolate isolate NOUN NN Number=Sing _ _ _ _ 27 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 LAIp LAIp NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 exclusively exclusively ADV RB _ _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 mature mature ADJ JJ Degree=Pos _ _ _ _ 39 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 + + SYM SYM _ _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 CD8 CD8 NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 (-) (-) PUNCT . _ _ _ _ _ 45 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 (+) (+) PUNCT -RRB- _ _ _ _ _ 47 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 8148 # text = Tumor necrosis factor (TNF) and interleukin-7 (IL-7), secreted during this interaction, are critical cytokines for HIV long terminal repeat transactivation through NF-kappaB-dependent activation. 1 Tumor tumor ADP IN _ _ _ _ _ 2 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 7 7 NUM CD NumType=Card _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 secreted secret VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 during during ADP IN _ _ _ _ _ 19 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 20 interaction interaction NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 critical critical ADJ JJ Degree=Pos _ _ _ _ 24 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 HIV HIV PROPN NNP Number=Sing _ _ _ _ 27 long long ADJ JJ Degree=Pos _ _ _ _ 28 terminal terminal NOUN NN Number=Sing _ _ _ _ 29 repeat repeat VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 31 through through ADP IN _ _ _ _ _ 32 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 37 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 8149 # text = TNF is the major inducer of NF-kappaB and particularly of the p50-p65 complex, whereas IL-7 acts as a cofactor by sustaining the expression of the p75 TNF receptor. 1 TNF TNF PRON PRP Case=Acc|Number=Sing|Person=1|PronType=Prs|Reflex=Yes _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 major major ADJ JJ Degree=Pos _ _ _ _ 5 inducer inducer NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 particularly particularly ADV RB _ _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 p65 p65 NOUN NN Number=Sing _ _ _ _ 17 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 whereas whereas SCONJ IN _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - SYM SYM _ _ _ _ SpaceAfter=No 22 7 7 NUM CD NumType=Card _ _ _ _ 23 acts act NOUN NNS Number=Plur _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 cofactor cofactor NOUN NN Number=Sing _ _ _ _ 27 by by SCONJ IN _ _ _ _ _ 28 sustaining sustain VERB VBG VerbForm=Ger _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 p75 p75 NOUN NN Number=Sing _ _ _ _ 34 TNF TNF ADP IN _ _ _ _ _ 35 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 8150 # text = The requirement for TNF is further confirmed by the observation that the inability of the intermediate CD4(+) CD8(-) CD3(-) thymocytes to replicate the virus is associated with a defect in TNF production during their interaction with TEC and correlates with the absence of nuclear NF-kappaB activity in these freshly isolated thymocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 requirement requirement NOUN NN Number=Sing _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 TNF TNF PROPN NNP Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 further further ADV RB _ _ _ _ _ 7 confirmed confirm VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 observation observation NOUN NN Number=Sing _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 inability inability NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 intermediate intermediate ADJ JJ Degree=Pos _ _ _ _ 17 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 + + SYM SYM _ _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 CD8 CD8 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 (-) (-) PUNCT . _ _ _ _ _ 23 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 (-) (-) PUNCT . _ _ _ _ _ 25 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 replicate replicate VERB VB VerbForm=Inf _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 virus virus NOUN NN Number=Sing _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 defect defect NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 TNF TNF PROPN NNP Number=Sing _ _ _ _ 37 production production NOUN NN Number=Sing _ _ _ _ 38 during during ADP IN _ _ _ _ _ 39 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 40 interaction interaction NOUN NN Number=Sing _ _ _ _ 41 with with ADP IN _ _ _ _ _ 42 TEC TEC NOUN NN Number=Sing _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 correlates correlate NOUN NNS Number=Plur _ _ _ _ 45 with with ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 absence absence NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 50 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 53 activity activity NOUN NN Number=Sing _ _ _ _ 54 in in ADP IN _ _ _ _ _ 55 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 56 freshly freshly ADV RB _ _ _ _ _ 57 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 58 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 8151 # text = Addition of exogenous TNF to the intermediate thymocyte cultures induces NF-kappaB activity and is sufficient to promote HIV replication in the cocultures with TEC. 1 Addition Addition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 4 TNF TNF PROPN NNP Number=Sing _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 intermediate intermediate ADJ JJ Degree=Pos _ _ _ _ 8 thymocyte thymocyte NOUN NN Number=Sing _ _ _ _ 9 cultures culture NOUN NNS Number=Plur _ _ _ _ 10 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 promote promote VERB VB VerbForm=Inf _ _ _ _ 20 HIV HIV PROPN NNP Number=Sing _ _ _ _ 21 replication replication NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 cocultures coculture NOUN NNS Number=Plur _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 TEC Tec NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 8152 # text = The other major subpopulation expressing the CD4 receptor, namely, the double-positive (DP) CD4(+) CD8(+) CD3(+/-) thymocytes, despite the entry of the virus, do not produce a significant level of virus, presumably because they are unresponsive to TNF and IL-7. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 other other ADJ JJ Degree=Pos _ _ _ _ 3 major major ADJ JJ Degree=Pos _ _ _ _ 4 subpopulation subpopulation NOUN NN Number=Sing _ _ _ _ 5 expressing express VERB VBG VerbForm=Ger _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 namely namely ADV RB _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 positive positive ADJ JJ Degree=Pos _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 DP DP NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 (+) (+) SYM NFP _ _ _ _ _ 21 CD8 CD8 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 + + SYM SYM _ _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 (+/-) (+/-) SYM NFP _ _ _ _ _ 27 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 despite despite ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 entry entry NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 37 not not PART RB _ _ _ _ _ 38 produce produce VERB VB VerbForm=Inf _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 significant significant ADJ JJ Degree=Pos _ _ _ _ 41 level level NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 presumably presumably ADV RB _ _ _ _ _ 46 because because SCONJ IN _ _ _ _ _ 47 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 48 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 49 unresponsive unresponsive ADJ JJ Degree=Pos _ _ _ _ 50 to to ADP IN _ _ _ _ _ 51 TNF TNF PROPN NNP Number=Sing _ _ _ _ 52 and and CCONJ CC _ _ _ _ _ 53 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 8153 # text = Together, these data suggest that in vivo, despite an efficient entry of the virus in all the CD4(+) subpopulations, a high viral load may be generated exclusively within the mature CD4(+) CD8(-) CD3(+) subset of thymocytes. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 data data NOUN NN Number=Sing _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 despite despite ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 13 entry entry NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 all all DET PDT _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 CD4 Cd4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 + + SYM SYM _ _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 subpopulations subpopulation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 high high ADJ JJ Degree=Pos _ _ _ _ 28 viral viral ADJ JJ Degree=Pos _ _ _ _ 29 load load NOUN NN Number=Sing _ _ _ _ 30 may may AUX MD VerbForm=Fin _ _ _ _ 31 be be AUX VB VerbForm=Inf _ _ _ _ 32 generated generate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 exclusively exclusively ADV RB _ _ _ _ _ 34 within within ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 mature mature NOUN NN Number=Sing _ _ _ _ 37 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 + + SYM SYM _ _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 CD8 CD8 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 (-) (-) PUNCT . _ _ _ _ _ 43 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 (+) (+) PUNCT -RRB- _ _ _ _ _ 45 subset subset NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 8154 # text = However, under conditions of inflammatory response after infection, TNF might also be present in the intermediate thymocyte compartment, leading to efficient HIV replication in these cells. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 under under ADP IN _ _ _ _ _ 4 conditions condition NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 7 response response NOUN NN Number=Sing _ _ _ _ 8 after after ADP IN _ _ _ _ _ 9 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 TNF TNF PRON PRP Case=Acc|Number=Sing|Person=1|PronType=Prs|Reflex=Yes _ _ _ _ 12 might might AUX MD VerbForm=Fin _ _ _ _ 13 also also ADV RB _ _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 present present ADJ JJ Degree=Pos _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 intermediate intermediate ADJ JJ Degree=Pos _ _ _ _ 19 thymocyte thymocyte NOUN NN Number=Sing _ _ _ _ 20 compartment compartment NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 leading lead VERB VBG VerbForm=Ger _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 25 HIV Hiv PROPN NNP Number=Sing _ _ _ _ 26 replication replication NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8155 # text = Document 0030011340 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011340 0030011340 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8156 # text = Regulation of CD95 (Fas) ligand expression by TCR-mediated signaling events. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 CD95 CD95 PROPN NNP Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 Fas Fas PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 ligand ligand NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 mediated mediate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 signaling signaling VERB VBG VerbForm=Ger _ _ _ _ 14 events event NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8157 # text = Stimulation of mature peripheral T cells by TCR engagement results in activation of signals that drive induction of cytokine gene expression and clonal expansion. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 mature mature ADJ JJ Degree=Pos _ _ _ _ 4 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 TCR Tcr NOUN NN Number=Sing _ _ _ _ 9 engagement engagement NOUN NN Number=Sing _ _ _ _ 10 results result NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 signals signal NOUN NNS Number=Plur _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 drive drive VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 induction induction NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 clonal clonal ADJ JJ Degree=Pos _ _ _ _ 24 expansion expansion NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8158 # text = However, under some conditions, engagement of the TCR leads instead to apoptosis. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 under under ADP IN _ _ _ _ _ 4 some some DET DT _ _ _ _ _ 5 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 engagement engagement NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 TCR TCR PROPN NNP Number=Sing _ _ _ _ 11 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 instead instead ADV RB _ _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 8159 # text = Recent studies demonstrate that TCR-stimulated apoptosis requires expression of CD95 ligand on activated T cells followed by an interaction between CD95 ligand and the CD95 receptor also expressed on this population. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 apoptosis apoptosis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 9 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 CD95 CD95 NUM CD NumType=Card _ _ _ _ 13 ligand ligand NOUN NN Number=Sing _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 interaction interaction NOUN NN Number=Sing _ _ _ _ 22 between between ADP IN _ _ _ _ _ 23 CD95 Cd95 NUM CD NumType=Card _ _ _ _ 24 ligand ligand NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 CD95 Cd95 PROPN NNP Number=Sing _ _ _ _ 28 receptor receptor NOUN NN Number=Sing _ _ _ _ 29 also also ADV RB _ _ _ _ _ 30 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 on on ADP IN _ _ _ _ _ 32 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 33 population population NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 8160 # text = The experiments reported in this study were designed to address the signaling events triggered by TCR engagement that are important for regulating CD95 ligand gene expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 experiments experiment NOUN NNS Number=Plur _ _ _ _ 3 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 study study NOUN NN Number=Sing _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 designed design VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 address address VERB VB VerbForm=Inf _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 signaling signaling NOUN NN Number=Sing _ _ _ _ 13 events event NOUN NNS Number=Plur _ _ _ _ 14 triggered trigger VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 TCR Tcr NOUN NN Number=Sing _ _ _ _ 17 engagement engagement NOUN NN Number=Sing _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 important important ADJ JJ Degree=Pos _ _ _ _ 21 for for SCONJ IN _ _ _ _ _ 22 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 23 CD95 CD95 NUM CD NumType=Card _ _ _ _ 24 ligand ligand NOUN NN Number=Sing _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 8161 # text = To approach this, we generated a luciferase reporter construct containing elements of the CD95 ligand promoter. 1 To to PART TO _ _ _ _ _ 2 approach approach VERB VB VerbForm=Inf _ _ _ _ 3 this this PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 generated generate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 9 reporter reporter NOUN NN Number=Sing _ _ _ _ 10 construct construct NOUN NN Number=Sing _ _ _ _ 11 containing contain VERB VBG VerbForm=Ger _ _ _ _ 12 elements element NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 CD95 CD95 PROPN NNP Number=Sing _ _ _ _ 16 ligand ligand NOUN NN Number=Sing _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 8162 # text = Using a previously described mutant of the Jurkat T cell line, we show that proximal signaling events dependent on the presence of the CD45 tyrosine phosphatase are required for TCR-stimulated CD95 ligand expression. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 mutant mutant NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 9 T T PROPN NNP Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 16 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 17 signaling signal NOUN NN Number=Sing _ _ _ _ 18 events event NOUN NNS Number=Plur _ _ _ _ 19 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 20 on on ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 presence presence NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 CD45 CD45 PROPN NNP Number=Sing _ _ _ _ 26 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 27 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 28 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 CD95 Cd95 NUM CD NumType=Card _ _ _ _ 35 ligand ligand NOUN NN Number=Sing _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 8163 # text = Transient transfection studies demonstrate further that TCR-stimulated activation of the Ras signaling pathway is required for optimal activation of CD95 ligand. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 transfection transfection NOUN NN Number=Sing _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 further further SCONJ IN _ _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 TCR Tcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 Ras Ras PROPN NNP Number=Sing _ _ _ _ 14 signaling signaling NOUN NN Number=Sing _ _ _ _ 15 pathway pathway NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 CD95 CD95 NUM CD NumType=Card _ _ _ _ 23 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 8164 # text = Next, in an effort to determine critical transcription factors that regulate CD95 ligand expression, we demonstrate a cyclosporin A-sensitive nuclear factor-AT response element in the promoter region of this gene that is critical for optimal CD95 ligand reporter activity in stimulated T cells. 1 Next next ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 effort effort NOUN NN Number=Sing _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 determine determine VERB VB VerbForm=Inf _ _ _ _ 8 critical critical ADJ JJ Degree=Pos _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 CD95 CD95 NUM CD NumType=Card _ _ _ _ 14 ligand ligand NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 18 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 21 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 24 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 AT at NOUN NN Number=Sing _ _ _ _ 28 response response NOUN NN Number=Sing _ _ _ _ 29 element element NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 promoter promoter NOUN NN Number=Sing _ _ _ _ 33 region region NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 36 gene gene NOUN NN Number=Sing _ _ _ _ 37 that that PRON WDT PronType=Rel _ _ _ _ 38 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 critical critical ADJ JJ Degree=Pos _ _ _ _ 40 for for ADP IN _ _ _ _ _ 41 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 42 CD95 Cd95 NUM CD NumType=Card _ _ _ _ 43 ligand ligand NUM CD NumType=Card _ _ _ _ 44 reporter reporter NOUN NN Number=Sing _ _ _ _ 45 activity activity NOUN NN Number=Sing _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 48 T t PROPN NNP Number=Sing _ _ _ _ 49 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 8165 # text = Together, these studies begin a dissection of the biochemical events that lead to expression of CD95 ligand, a required step for TCR-induced apoptosis. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ _ 5 begin begin VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 dissection dissection NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 11 events event NOUN NNS Number=Plur _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 lead lead VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 CD95 CD95 NUM CD NumType=Card _ _ _ _ 18 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 step step NOUN NN Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8166 # text = Document 0030011342 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011342 0030011342 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8167 # text = Involvement of Egr-1/RelA synergy in distinguishing T cell activation from tumor necrosis factor-alpha-induced NF-kappa B1 transcription. 1 Involvement involvement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 RelA Rela NOUN NN Number=Sing _ _ _ _ 7 synergy synergy NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 distinguishing distinguishing ADJ JJ Degree=Pos _ _ _ _ 10 T T PROPN NNP Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 tumor tumor NOUN NN Number=Sing _ _ _ _ 15 necrosis necrosis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 factor-alpha-induced factor-alpha-induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa PROPN NNP Number=Sing _ _ _ _ 20 B1 b1 PROPN NNP Number=Sing _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8168 # text = NF-kappa B is an important transcription factor required for T cell proliferation and other immunological functions. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 important important ADJ JJ Degree=Pos _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 other other ADJ JJ Degree=Pos _ _ _ _ 17 immunological immunological ADJ JJ Degree=Pos _ _ _ _ 18 functions function NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 8169 # text = The NF-kappa B1 gene encodes a 105-kD protein that is the precursor of the p50 component of NF-kappa B. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa PROPN NNP Number=Sing _ _ _ _ 5 B1 B1 PROPN NNP Number=Sing _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 105 105 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kD kd NOUN NN Number=Sing _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 precursor precursor NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 p50 p50 NOUN NN Number=Sing _ _ _ _ 20 component component NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ 25 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 8170 # text = Previously, we and others have demonstrated that NF-kappa B regulates the NF-kappa B1 gene. 1 Previously previously ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 others other NOUN NNS Number=Plur _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa PROPN NNP Number=Sing _ _ _ _ 12 B b PROPN NNP Number=Sing _ _ _ _ 13 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B1 b1 PROPN NNP Number=Sing _ _ _ _ 19 gene gene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 8171 # text = In this manuscript we have investigated the molecular mechanisms by which T cell lines stimulated with phorbol 12-myristate 13-acetate (PMA) and phytohemagglutin (PHA) display significantly higher levels of NF-kappa B1 encoding transcripts than cells stimulated with tumor necrosis factor-alpha, despite the fact that both stimuli activate NF-kappa B. Characterization of the NF-kappa B1 promoter identified an Egr-1 site which was found to be essential for both the PMA/PHA-mediated induction as well as the synergistic activation observed after the expression of the RelA subunit of NF-kappa B and Egr-1. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 manuscript manuscript NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 9 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 T T PROPN NNP Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 lines line NOUN NNS Number=Plur _ _ _ _ 15 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 18 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 myristate myristate NOUN NN Number=Sing _ _ _ _ 21 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 acetate acetate NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 phytohemagglutin phytohemagglutin NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 PHA PHA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 display display VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 33 significantly significantly ADV RB _ _ _ _ _ 34 higher higher ADJ JJR Degree=Cmp _ _ _ _ 35 levels level NOUN NNS Number=Plur _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 kappa kappa NOUN NN Number=Sing _ _ _ _ 40 B1 b1 NOUN NN Number=Sing _ _ _ _ 41 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 42 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 43 than than ADP IN _ _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ _ 45 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 with with ADP IN _ _ _ _ _ 47 tumor tumor NOUN NN Number=Sing _ _ _ _ 48 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 49 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 despite despite ADP IN _ _ _ _ _ 54 the the DET DT Definite=Def|PronType=Art _ _ _ _ 55 fact fact NOUN NN Number=Sing _ _ _ _ 56 that that SCONJ IN _ _ _ _ _ 57 both both DET DT _ _ _ _ _ 58 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 59 activate activate NOUN NN Number=Sing _ _ _ _ 60 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 61 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 62 kappa kappa PROPN NNP Number=Sing _ _ _ _ 63 B. B. PROPN NNP Number=Sing _ _ _ _ 64 Characterization Characterization PROPN NNP Number=Sing _ _ _ _ 65 of of ADP IN _ _ _ _ _ 66 the the DET DT Definite=Def|PronType=Art _ _ _ _ 67 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 68 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 69 kappa kappa PROPN NNP Number=Sing _ _ _ _ 70 B1 B1 PROPN NNP Number=Sing _ _ _ _ 71 promoter promoter ADV RB _ _ _ _ _ 72 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 73 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 74 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 75 -1 -1 NUM CD NumType=Card _ _ _ _ 76 site site NOUN NN Number=Sing _ _ _ _ 77 which which PRON WDT PronType=Rel _ _ _ _ 78 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 79 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 80 to to PART TO _ _ _ _ _ 81 be be AUX VB VerbForm=Inf _ _ _ _ 82 essential essential ADJ JJ Degree=Pos _ _ _ _ 83 for for ADP IN _ _ _ _ _ 84 both both CCONJ CC _ _ _ _ _ 85 the the DET DT Definite=Def|PronType=Art _ _ _ _ 86 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 87 / / PUNCT , _ _ _ _ SpaceAfter=No 88 PHA PHA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 89 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 90 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 91 induction induction NOUN NN Number=Sing _ _ _ _ 92 as as ADV RB _ _ _ _ _ 93 well well ADV RB Degree=Pos _ _ _ _ 94 as as ADP IN _ _ _ _ _ 95 the the DET DT Definite=Def|PronType=Art _ _ _ _ 96 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 97 activation activation NOUN NN Number=Sing _ _ _ _ 98 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 99 after after ADP IN _ _ _ _ _ 100 the the DET DT Definite=Def|PronType=Art _ _ _ _ 101 expression expression NOUN NN Number=Sing _ _ _ _ 102 of of ADP IN _ _ _ _ _ 103 the the DET DT Definite=Def|PronType=Art _ _ _ _ 104 RelA RelA PROPN NNP Number=Sing _ _ _ _ 105 subunit subunit NOUN NN Number=Sing _ _ _ _ 106 of of ADP IN _ _ _ _ _ 107 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 108 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 109 kappa kappa PROPN NNP Number=Sing _ _ _ _ 110 B b PROPN NNP Number=Sing _ _ _ _ 111 and and CCONJ CC _ _ _ _ _ 112 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 113 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 114 . . PUNCT . _ _ _ _ _ # sent_id = 8172 # text = Furthermore, Egr-1 induction was required for endogenous NF-kappa B1 gene expression, since PMA/PHA-stimulated T cell lines expressing antisense Egr-1 RNA were inhibited in their ability to upregulate NF-kappa B1 transcription. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 -1 -1 NUM CD NumType=Card _ _ _ _ 5 induction induction NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa PROPN NNP Number=Sing _ _ _ _ 13 B1 B1 PROPN NNP Number=Sing _ _ _ _ 14 gene gene ADJ JJ Degree=Pos _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 since since ADP IN _ _ _ _ _ 18 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 / / PUNCT , _ _ _ _ SpaceAfter=No 20 PHA PHA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 lines line NOUN NNS Number=Plur _ _ _ _ 26 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 27 antisense antisense ADJ JJ Degree=Pos _ _ _ _ 28 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 -1 -1 NUM CD NumType=Card _ _ _ _ 30 RNA RNA PROPN NNP Number=Sing _ _ _ _ 31 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 35 ability ability NOUN NN Number=Sing _ _ _ _ 36 to to PART TO _ _ _ _ _ 37 upregulate upregulate VERB VB VerbForm=Inf _ _ _ _ 38 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 kappa kappa PROPN NNP Number=Sing _ _ _ _ 41 B1 b1 PROPN NNP Number=Sing _ _ _ _ 42 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 8173 # text = Our studies indicate that transcriptional synergy mediated by activation of both Egr-1 and NF-kappa B may have important ramifications in T cell development by upregulating NF-kappa B1 gene expression. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 6 synergy synergy NOUN NN Number=Sing _ _ _ _ 7 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 both both DET DT _ _ _ _ _ 12 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 -1 -1 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B b PROPN NNP Number=Sing _ _ _ _ 19 may may AUX MD VerbForm=Fin _ _ _ _ 20 have have VERB VB VerbForm=Inf _ _ _ _ 21 important important ADJ JJ Degree=Pos _ _ _ _ 22 ramifications ramification NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 T T PROPN NNP Number=Sing _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 development development NOUN NN Number=Sing _ _ _ _ 27 by by SCONJ IN _ _ _ _ _ 28 upregulating upregulat VERB VBG VerbForm=Ger _ _ _ _ 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappa kappa PROPN NNP Number=Sing _ _ _ _ 32 B1 B1 PROPN NNP Number=Sing _ _ _ _ 33 gene gene ADJ JJ Degree=Pos _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8174 # text = Document 0030011345 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011345 0030011345 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8175 # text = Regulation of NF-kappa B, AP-1, NFAT, and STAT1 nuclear import in T lymphocytes by noninvasive delivery of peptide carrying the nuclear localization sequence of NF-kappa B p50. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 STAT1 STAT1 NUM CD NumType=Card _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 import import NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 noninvasive noninvasive ADJ JJ Degree=Pos _ _ _ _ 23 delivery delivery NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 peptide peptide NOUN NN Number=Sing _ _ _ _ 26 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 29 localization localization NOUN NN Number=Sing _ _ _ _ 30 sequence sequence NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappa kappa PROPN NNP Number=Sing _ _ _ _ 35 B b NOUN NN Number=Sing _ _ _ _ 36 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8176 # text = Activation of T lymphocytes by Ags or cytokines results in translocation of the transcription factors NF-kappa B, AP-1, NFAT, and STAT from the cytoplasm into the nucleus. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 Ags ag NOUN NNS Number=Plur _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 9 results result NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 translocation translocation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 STAT STAT PROPN NNP Number=Sing _ _ _ _ 29 from from ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 32 into into ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 8177 # text = The first step in the nuclear import process is recognition of a nuclear localization sequence (NLS) within the karyophilic protein by a cytoplasmic receptor such as the importin (karyopherin)-alpha subunit. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 step step NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 import import NOUN NN Number=Sing _ _ _ _ 8 process process NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 recognition recognition NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 localization localization NOUN NN Number=Sing _ _ _ _ 15 sequence sequence NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 NLS NLS INTJ UH _ _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 within within ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 karyophilic karyophilic ADJ JJ Degree=Pos _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 26 receptor receptor NOUN NN Number=Sing _ _ _ _ 27 such such ADJ JJ Degree=Pos _ _ _ _ 28 as as ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 importin importin NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 karyopherin karyopherin NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 - - PUNCT : _ _ _ _ SpaceAfter=No 35 alpha alpha NOUN NN Number=Sing _ _ _ _ 36 subunit subunit NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 8178 # text = The NLSs of NF-kappa B, AP-1, and NFAT differ and the NLS of STAT1 has not yet been identified. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 NLSs NLSs NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 15 differ differ PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 NLS nls NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 STAT1 STAT1 PROPN NNP Number=Sing _ _ _ _ 21 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 yet yet ADV RB _ _ _ _ _ 24 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 25 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 8179 # text = Herein we demonstrate that the inducible nuclear import of NF-kappa B, AP-1, NFAT, and STAT1 in Jurkat T lymphocytes is significantly inhibited by a cell-permeable peptide carrying the NLS of the NF-kappa B p50 subunit. 1 Herein herein ADV WRB PronType=Rel _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 import import NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 NFAT NFAT NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 STAT1 stat1 PROPN NNP Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 25 T T PROPN NNP Number=Sing _ _ _ _ 26 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 significantly significantly ADV RB _ _ _ _ _ 29 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 permeable permeable ADJ JJ Degree=Pos _ _ _ _ 35 peptide peptide NOUN NN Number=Sing _ _ _ _ 36 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 NLS nls NOUN NNS Number=Plur _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 kappa kappa PROPN NNP Number=Sing _ _ _ _ 44 B b NOUN NN Number=Sing _ _ _ _ 45 p50 p50 NUM CD NumType=Card _ _ _ _ 46 subunit subunit NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 8180 # text = NLS peptide-mediated disruption of the nuclear import of these transcription factors results in inhibition of I kappa B alpha and IL-2 gene expression, processes dependent on NF-kappa B or the combination of NF-kappa B, AP-1, and NFAT. 1 NLS NLS INTJ UH _ _ _ _ _ 2 peptide peptide VERB VB Mood=Imp|VerbForm=Fin _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 disruption disruption NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 import import NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factors factor NOUN NNS Number=Plur _ _ _ _ 14 results result NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 19 kappa kappa PROPN NNP Number=Sing _ _ _ _ 20 B b PROPN NNP Number=Sing _ _ _ _ 21 alpha alpha PROPN NNP Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ _ 26 gene gene NOUN NN Number=Sing _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 processes process NOUN NNS Number=Plur _ _ _ _ 30 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 31 on on ADP IN _ _ _ _ _ 32 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappa kappa PROPN NNP Number=Sing _ _ _ _ 35 B b PROPN NNP Number=Sing _ _ _ _ 36 or or CCONJ CC _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 combination combination NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 kappa kappa NOUN NN Number=Sing _ _ _ _ 43 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 8181 # text = Further, we show that inhibitory NLS peptide interacts in vitro with a cytoplasmic NLS receptor complex comprised of the Rch1/importin (karyopherin)-beta heterodimer expressed in Jurkat T cells. 1 Further further ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 7 NLS Nl NOUN NN Number=Sing _ _ _ _ 8 peptide peptide NOUN NN Number=Sing _ _ _ _ 9 interacts interact NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 vitro vitro NOUN NN Number=Sing _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 15 NLS nls NOUN NN Number=Sing _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ _ 17 complex complex NOUN NN Number=Sing _ _ _ _ 18 comprised comprise VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 Rch1 rch1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 / / PUNCT , _ _ _ _ SpaceAfter=No 23 importin importin ADJ JJ Degree=Pos _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 karyopherin karyopherin NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 beta beta NOUN NN Number=Sing _ _ _ _ 29 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 30 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 33 T T PROPN NNP Number=Sing _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 8182 # text = Taken together, these data indicate that the inducible nuclear import of NF-kappa B, AP-1, NFAT, and STAT1 in Jurkat T cells can be regulated by NLS peptide delivered noninvasively to the cytoplasm of Jurkat T cells to target members of the importin (karyopherin)-alpha beta NLS receptor complex. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 data data NOUN NN Number=Sing _ _ _ _ 6 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 import import NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 STAT1 stat1 PROPN NNP Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 28 T t PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 can can AUX MD VerbForm=Fin _ _ _ _ 31 be be AUX VB VerbForm=Inf _ _ _ _ 32 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 NLS NLS PROPN NNP Number=Sing _ _ _ _ 35 peptide peptide ADV RB _ _ _ _ _ 36 delivered deliver VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 37 noninvasively noninvasively ADV RB _ _ _ _ _ 38 to to ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 43 T t PROPN NNP Number=Sing _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ _ 45 to to PART TO _ _ _ _ _ 46 target target VERB VB VerbForm=Inf _ _ _ _ 47 members member NOUN NNS Number=Plur _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 importin importin NOUN NN Number=Sing _ _ _ _ 51 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 52 karyopherin karyopherin NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 54 - - PUNCT : _ _ _ _ SpaceAfter=No 55 alpha alpha X GW _ _ _ _ _ 56 beta beta X GW _ _ _ _ _ 57 NLS nls X GW _ _ _ _ _ 58 receptor receptor X GW _ _ _ _ _ 59 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8183 # text = Document 0030011346 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011346 0030011346 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8184 # text = Transcription factor GATA-3 is differentially expressed in murine Th1 and Th2 cells and controls Th2-specific expression of the interleukin-5 gene. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 GATA GATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 3 3 NUM CD NumType=Card _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 differentially differentially ADV RB _ _ _ _ _ 8 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 murine murine NOUN NN Number=Sing _ _ _ _ 11 Th1 Th1 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 Th2 Th2 NUM CD NumType=Card _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 controls control NOUN NNS Number=Plur _ _ _ _ 17 Th2 Th2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 5 5 NUM CD NumType=Card _ _ _ _ 26 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8185 # text = Interleukin-5 (IL-5), which is produced by CD4(+) 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 5 5 NUM CD NumType=Card _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 which which PRON WDT PronType=Rel _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 produced produce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 (+) (+) SYM NFP _ _ _ _ _ # sent_id = 8186 # text = T helper 2 (Th2) cells, but not by Th1 cells, plays a key role in the development of eosinophilia in asthma. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 helper helper NOUN NN Number=Sing _ _ _ _ 3 2 2 NUM CD NumType=Card _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 Th2 Th2 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 not not ADV RB _ _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 Th1 Th1 NUM CD NumType=Card _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 key key ADJ JJ Degree=Pos _ _ _ _ 18 role role NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 development development NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 eosinophilia eosinophilion NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 asthma asthma NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 8187 # text = Despite increasing evidence that the outcome of many diseases is determined by the ratio of the two subsets of CD4(+) 1 Despite despite SCONJ IN _ _ _ _ _ 2 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 3 evidence evidence NOUN NN Number=Sing _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 outcome outcome NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 many many ADJ JJ Degree=Pos _ _ _ _ 9 diseases disease NOUN NNS Number=Plur _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 ratio ratio NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 two two NUM CD NumType=Card _ _ _ _ 18 subsets subset NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 +) +) SYM NFP _ _ _ _ _ # sent_id = 8188 # text = T helper cells, Th1 and Th2, the molecular basis for Th1- and Th2- specific gene expression remains to be elucidated. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 helper helper ADJ JJR Degree=Cmp _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 Th1 Th1 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 Th2 Th2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 11 basis basis NOUN NN Number=Sing _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 Th1 Th1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 Th2 th2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ _ 18 specific specific ADJ JJ Degree=Pos _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 be be AUX VB VerbForm=Inf _ _ _ _ 24 elucidated elucidate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8189 # text = We previously established a critical role for the transcription factor GATA-3 in IL-5 promoter activation in EL-4 cells, which express both Th1- and Th2-type cytokines. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 previously previously ADV RB _ _ _ _ _ 3 established establish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 critical critical ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 3 3 NUM CD NumType=Card _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 5 5 NUM CD NumType=Card _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 EL El PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 4 4 NUM CD NumType=Card _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 which which PRON WDT PronType=Rel _ _ _ _ 27 express express ADJ JJ Degree=Pos _ _ _ _ 28 both both CCONJ CC _ _ _ _ _ 29 Th1 th1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 Th2 th2 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 type type NOUN NN Number=Sing _ _ _ _ 35 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 8190 # text = Our studies reported here demonstrate that GATA-3 is critical for expression of the IL-5 gene in bona fide Th2 cells. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 reported report VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 here here ADV RB PronType=Dem _ _ _ _ 5 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - SYM SYM _ _ _ _ SpaceAfter=No 9 3 3 NUM CD NumType=Card _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 critical critical ADJ JJ Degree=Pos _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 5 5 NUM CD NumType=Card _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 bona bona NOUN NN Number=Sing _ _ _ _ 22 fide fide NOUN NN Number=Sing _ _ _ _ 23 Th2 Th2 NUM CD NumType=Card _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8191 # text = Whereas mutations in the GATA-3 site abolished antigen- or cAMP- stimulated IL-5 promoter activation in Th2 cells, ectopic expression of GATA-3 in Th1 cells or in a non-lymphoid, non-IL-5-producing cell line activated the IL-5 promoter. 1 Whereas whereas SCONJ IN _ _ _ _ _ 2 mutations mutation NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 GATA GATA NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 3 3 NUM CD NumType=Card _ _ _ _ 8 site site NOUN NN Number=Sing _ _ _ _ 9 abolished abolish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 antigen antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ _ 15 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 5 5 NUM CD NumType=Card _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 Th2 Th2 NUM CD NumType=Card _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 ectopic ectopic ADJ JJ Degree=Pos _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 3 3 NUM CD NumType=Card _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 Th1 Th1 NUM CD NumType=Card _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ _ 34 or or CCONJ CC _ _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 non-lymphoid non-lymphoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 non non X AFX _ _ _ _ SpaceAfter=No 40 -IL -il NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 producing produce VERB VBG VerbForm=Ger _ _ _ _ 45 cell cell NOUN NN Number=Sing _ _ _ _ 46 line line NOUN NN Number=Sing _ _ _ _ 47 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT , _ _ _ _ SpaceAfter=No 51 5 5 NUM CD NumType=Card _ _ _ _ 52 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 8192 # text = During the differentiation of naive CD4(+) 1 During during ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 naive naive ADJ JJ Degree=Pos _ _ _ _ 6 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 (+) (+) SYM NFP _ _ _ _ _ # sent_id = 8193 # text = T cells isolated from T cell receptor transgenic mice, GATA-3 gene expression was up-regulated in developing 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 9 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 3 3 NUM CD NumType=Card _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 up up ADV RB _ _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 in in SCONJ IN _ _ _ _ _ 21 developing develop VERB VBG VerbForm=Ger _ _ _ _ # sent_id = 8194 # text = Th2 cells, but was down-regulated in Th1 cells, and antigen- or cAMP-activated Th2 cells (but not Th1 cells) expressed the GATA-3 protein. 1 Th2 Th2 NUM CD NumType=Card _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 but but CCONJ CC _ _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 down down ADV RB _ _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 Th1 Th1 NUM CD NumType=Card _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 antigen antigen ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 Th2 th2 NUM CD NumType=Card _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 but but CCONJ CC _ _ _ _ _ 24 not not ADV RB _ _ _ _ _ 25 Th1 Th1 NUM CD NumType=Card _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 3 3 NUM CD NumType=Card _ _ _ _ 33 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 8195 # text = Thus, GATA-3 may play an important role in the balance between Th1 and Th2 subsets in immune responses. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 3 3 NUM CD NumType=Card _ _ _ _ 6 may may AUX MD VerbForm=Fin _ _ _ _ 7 play play VERB VB VerbForm=Inf _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 important important ADJ JJ Degree=Pos _ _ _ _ 10 role role NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 balance balance NOUN NN Number=Sing _ _ _ _ 14 between between ADP IN _ _ _ _ _ 15 Th1 Th1 NUM CD NumType=Card _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 Th2 Th2 NUM CD NumType=Card _ _ _ _ 18 subsets subset NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 immune immune ADJ JJ Degree=Pos _ _ _ _ 21 responses respons NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 8196 # text = Inhibition of GATA-3 activity has therapeutic potential in the treatment of asthma and other hypereosinophilic diseases. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 3 3 NUM CD NumType=Card _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 9 potential potential NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 treatment treatment NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 asthma asthma NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 other other ADJ JJ Degree=Pos _ _ _ _ 17 hypereosinophilic hypereosinophilic ADJ JJ Degree=Pos _ _ _ _ 18 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8197 # text = Document 0030011359 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011359 0030011359 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8198 # text = Inhibition of human immunodeficiency virus type 1 replication in vitro by a novel combination of anti-Tat single-chain intrabodies and NF-kappa B antagonists. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 type type NOUN NN Number=Sing _ _ _ _ 7 1 1 NUM CD NumType=Card _ _ _ _ 8 replication replication NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 vitro vitro NUM CD NumType=Card _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 novel novel NOUN NN Number=Sing _ _ _ _ 14 combination combination NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 anti anti X AFX _ _ _ _ SpaceAfter=No 17 -Tat -Tat ADJ JJ Degree=Pos _ _ _ _ 18 single single ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 chain chain NOUN NN Number=Sing _ _ _ _ 21 intrabodies intrabody NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 antagonists antagonist NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8199 # text = Human immunodeficiency virus type 1 (HIV-1) 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 3 virus virus NOUN NN Number=Sing _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ _ 5 1 1 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ # sent_id = 8200 # text = Tat, an early regulatory protein that is critical for viral gene expression and replication, transactivates the HIV-1 long terminal repeat (LTR) via its binding to the transactivation response element (TAR) and, along with other cellular factors, increases viral transcription initiation and elongation. 1 Tat Tat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 early early ADJ JJ Degree=Pos _ _ _ _ 5 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 critical critical ADJ JJ Degree=Pos _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 viral viral ADJ JJ Degree=Pos _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 transactivates transactivate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 long long ADJ JJ Degree=Pos _ _ _ _ 23 terminal terminal NOUN NN Number=Sing _ _ _ _ 24 repeat repeat NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 via via ADP IN _ _ _ _ _ 29 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 30 binding binding VERB VBG VerbForm=Ger _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 34 response response NOUN NN Number=Sing _ _ _ _ 35 element element NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 TAR TAR NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 along along ADP IN _ _ _ _ _ 42 with with ADP IN _ _ _ _ _ 43 other other ADJ JJ Degree=Pos _ _ _ _ 44 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 45 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 increases increase NOUN NNS Number=Plur _ _ _ _ 48 viral viral ADJ JJ Degree=Pos _ _ _ _ 49 transcription transcription NOUN NN Number=Sing _ _ _ _ 50 initiation initiation NOUN NN Number=Sing _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 elongation elongation NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 8201 # text = Tat also superactivates the HIV-1 promoter through a TAR-independent mechanism, including tumor necrosis factor alpha-induced and protein kinase C (PKC)-dependent activation of NF-kappa B, and inhibitors of Tat and NF-kappa B cooperatively down-regulate this Tat-mediated LTR superactivation. 1 Tat Tat PROPN NNP Number=Sing _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 superactivates superactivate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 through through ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 TAR Tar NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 independent independent ADJ JJ Degree=Pos _ _ _ _ 14 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 including include VERB VBG VerbForm=Ger _ _ _ _ 17 tumor tumor NOUN NN Number=Sing _ _ _ _ 18 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 alpha-induced alpha-induced NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 kinase kinase NOUN NN Number=Sing _ _ _ _ 24 C C PROPN NNP Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappa kappa PROPN NNP Number=Sing _ _ _ _ 35 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 Tat Tat PROPN NNP Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 kappa kappa NOUN NN Number=Sing _ _ _ _ 45 B b NOUN NN Number=Sing _ _ _ _ 46 cooperatively cooperatively ADV RB _ _ _ _ _ 47 down down ADV RB _ _ _ _ SpaceAfter=No 48 - - PUNCT , _ _ _ _ SpaceAfter=No 49 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 50 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 51 Tat- Tat- NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 53 LTR Ltr ADP IN _ _ _ _ _ 54 superactivation superactivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 8202 # text = In this study, a combined pharmacologic and genetic strategy using two PKC (NF-kappa B) inhibitors, pentoxifylline (PTX) and Go-6976, and a stably expressed anti-Tat single-chain intracellular antibody (sFv intrabody) was employed to obtain cooperative inhibition of both HIV-1 LTR-driven gene expression and HIV-1 replication. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 pharmacologic pharmacologic NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 10 strategy strategy NOUN NN Number=Sing _ _ _ _ 11 using use VERB VBG VerbForm=Ger _ _ _ _ 12 two two NUM CD NumType=Card _ _ _ _ 13 PKC Pkc NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 pentoxifylline pentoxifylline NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 PTX PTX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 Go go PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 -6976 -6976 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 stably stably ADV RB _ _ _ _ _ 33 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 anti anti X AFX _ _ _ _ SpaceAfter=No 35 -Tat -Tat ADJ JJ Degree=Pos _ _ _ _ 36 single single ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 chain chain NOUN NN Number=Sing _ _ _ _ 39 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 40 antibody antibody NOUN NN Number=Sing _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 sFv sFv NOUN NN Number=Sing _ _ _ _ 43 intrabody intrabody NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ _ 45 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 46 employed employ VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 47 to to PART TO _ _ _ _ _ 48 obtain obtain VERB VB VerbForm=Inf _ _ _ _ 49 cooperative cooperative ADJ JJ Degree=Pos _ _ _ _ 50 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 51 of of ADP IN _ _ _ _ _ 52 both both DET DT _ _ _ _ _ 53 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 1 1 NUM CD NumType=Card _ _ _ _ 56 LTR Ltr NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 driven driven VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 59 gene gene NOUN NN Number=Sing _ _ _ _ 60 expression expression NOUN NN Number=Sing _ _ _ _ 61 and and CCONJ CC _ _ _ _ _ 62 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 63 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 64 1 1 NUM CD NumType=Card _ _ _ _ 65 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 66 . . PUNCT . _ _ _ _ _ # sent_id = 8203 # text = Treatment of cells with PTX and Go-6976 resulted in cooperative inhibition of both HIV-1 LTR-driven gene expression and HIV-1 replication. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 PTX Ptx PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 Go-6976 go-6976 PROPN NNP Number=Sing _ _ _ _ 8 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 cooperative cooperative ADJ JJ Degree=Pos _ _ _ _ 11 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 both both CCONJ CC _ _ _ _ _ 14 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 LTR- LTR- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 8204 # text = In addition, the combined use of anti-Tat sFv intrabodies and the two NF-kappa B inhibitors retained the virus in the latent state for as long as 45 days. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 use use NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 anti anti X AFX _ _ _ _ SpaceAfter=No 9 -Tat -Tat PROPN NNP Number=Sing _ _ _ _ 10 sFv sFv PROPN NNP Number=Sing _ _ _ _ 11 intrabodies intrabody NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 two two NUM CD NumType=Card _ _ _ _ 15 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B b PROPN NNP Number=Sing _ _ _ _ 19 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 20 retained retain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 virus virus NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 latent latent ADJ JJ Degree=Pos _ _ _ _ 26 state state NOUN NN Number=Sing _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 as as ADV RB _ _ _ _ _ 29 long long ADV RB Degree=Pos _ _ _ _ 30 as as SCONJ IN _ _ _ _ _ 31 45 45 NUM CD NumType=Card _ _ _ _ 32 days day NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 8205 # text = The combined treatment resulted in more durable inhibition of HIV-1 replication than was seen with the NF-kappa B inhibitors alone or the anti-Tat sFv intrabodies alone. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 treatment treatment NOUN NN Number=Sing _ _ _ _ 4 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 more more ADJ JJR Degree=Cmp _ _ _ _ 7 durable durable ADJ JJ Degree=Pos _ _ _ _ 8 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 replication replication NOUN NN Number=Sing _ _ _ _ 14 than than ADP IN _ _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa NOUN NN Number=Sing _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ _ 23 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 24 alone alone ADV RB _ _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 anti anti X AFX _ _ _ _ SpaceAfter=No 28 -Tat -Tat ADJ JJ Degree=Pos _ _ _ _ 29 sFv sFv NOUN NN Number=Sing _ _ _ _ 30 intrabodies intrabody NOUN NNS Number=Plur _ _ _ _ 31 alone alone ADV RB _ _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 8206 # text = Together, these results suggest that in future clinical gene therapy trials, a combined pharmacologic and genetic strategy like the one reported here may improve the survival of transduced cells and prolong clinical benefit. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 future future ADJ JJ Degree=Pos _ _ _ _ 9 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 therapy therapy NOUN NN Number=Sing _ _ _ _ 12 trials trial NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 pharmacologic pharmacologic NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 19 strategy strategy NOUN NN Number=Sing _ _ _ _ 20 like like ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 one one NOUN NN Number=Sing _ _ _ _ 23 reported report VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 here here ADV RB PronType=Dem _ _ _ _ 25 may may AUX MD VerbForm=Fin _ _ _ _ 26 improve improve VERB VB VerbForm=Inf _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 survival survival NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 transduced transduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 prolong prolong ADJ JJ Degree=Pos _ _ _ _ 34 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 35 benefit benefit NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8207 # text = Document 0030011364 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011364 0030011364 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8208 # text = N-acetyl-L-cysteine inhibits primary human T cell responses at the dendritic cell level: association with NF-kappaB inhibition. 1 N-acetyl N-acetyl ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 -L- -L- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 4 inhibits inhibits NOUN NNS Number=Plur _ _ _ _ 5 primary primary ADJ JJ Degree=Pos _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 T t NOUN NN Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 responses response NOUN NNS Number=Plur _ _ _ _ 10 at at ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 dendritic dendritic ADJ JJ Degree=Pos _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 : : PUNCT : _ _ _ _ _ 16 association association NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 inhibition inhibition NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8209 # text = N-acetyl-L-cysteine (NAC) is an antioxidant molecule endowed with immunomodulatory properties. 1 N-acetyl N-acetyl ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 -L- -L- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 NAC NAC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 antioxidant antioxidant ADJ JJ Degree=Pos _ _ _ _ 10 molecule molecule NOUN NN Number=Sing _ _ _ _ 11 endowed endow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 immunomodulatory immunomodulatory ADJ JJ Degree=Pos _ _ _ _ 14 properties property NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 8210 # text = To investigate the effect of NAC on the induction phase of 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effect effect NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NAC NAC PROPN NNP Number=Sing _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 phase phase NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ # sent_id = 8211 # text = T cell responses, we analyzed its action on human dendritic cells (DC) derived from adherent PBMC cultured with IL-4 and granulocyte-macrophage CSF. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 8 action action NOUN NN Number=Sing _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 dendritic dendritic ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 DC DC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 derived derive VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 adherent adherent ADJ JJ Degree=Pos _ _ _ _ 19 PBMC PBMC PROPN NNP Number=Sing _ _ _ _ 20 cultured culture VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 4 4 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 29 CSF Csf NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 8212 # text = We first found that NAC inhibited the constitutive as well as the LPS-induced activity of the transcription factor NF-kappaB. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 first first ADV RB _ _ _ _ _ 3 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 NAC NAC PROPN NNP Number=Sing _ _ _ _ 6 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 9 as as ADV RB _ _ _ _ _ 10 well well ADV RB Degree=Pos _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 8213 # text = In parallel, NAC was shown to down-regulate the production of cytokines by DC as well as their surface expression of HLA-DR, CD86 (B7-2), and CD40 molecules both at the basal state and upon LPS activation. 1 In in ADP IN _ _ _ _ _ 2 parallel parallel NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 NAC NAC PROPN NNP Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 down down ADV RB _ _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 production production NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 DC DC PROPN NNP Number=Sing _ _ _ _ 17 as as ADV RB _ _ _ _ _ 18 well well ADV RB Degree=Pos _ _ _ _ 19 as as ADP IN _ _ _ _ _ 20 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 surface surface NOUN NN Number=Sing _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 DR dr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 CD86 Cd86 PROPN NNP Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 B7 B7 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - SYM SYM _ _ _ _ SpaceAfter=No 32 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 CD40 CD40 NUM CD NumType=Card _ _ _ _ 37 molecules molecule NOUN NNS Number=Plur _ _ _ _ 38 both both CCONJ CC _ _ _ _ _ 39 at at ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 basal basal ADJ JJ Degree=Pos _ _ _ _ 42 state state NOUN NN Number=Sing _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 upon upon ADP IN _ _ _ _ _ 45 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 46 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 8214 # text = NAC also inhibited DC responses induced by CD40 engagement. 1 NAC NAC PROPN NNP Number=Sing _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 DC DC PROPN NNP Number=Sing _ _ _ _ 5 responses response NOUN NNS Number=Plur _ _ _ _ 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 CD40 CD40 NUM CD NumType=Card _ _ _ _ 9 engagement engagement NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 8215 # text = The inhibitory effects of NAC were not due to nonspecific toxicity as neither the viability of DC nor their mannose receptor-mediated endocytosis were modified by NAC. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 3 effects effect NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NAC NAC PROPN NNP Number=Sing _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 due due VERB VB VerbForm=Inf _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 nonspecific nonspecific ADJ JJ Degree=Pos _ _ _ _ 11 toxicity toxicity NOUN NN Number=Sing _ _ _ _ 12 as as SCONJ IN _ _ _ _ _ 13 neither neither SCONJ IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 viability viability NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 DC DC PROPN NNP Number=Sing _ _ _ _ 18 nor nor CCONJ CC _ _ _ _ _ 19 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 mannose mannose NOUN NN Number=Sing _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 endocytosis endocytosis NOUN NN Number=Sing _ _ _ _ 25 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 modified modify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 NAC NAC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 8216 # text = Finally, we found that the addition of NAC to MLR between naive T cells and allogeneic DC resulted in a profound inhibition of alloreactive responses, which could be attributed to a defect of DC as APC-independent T cell responses were not inhibited by NAC. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 addition addition NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NAC NAC PROPN NNP Number=Sing _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 MLR MLR PROPN NNP Number=Sing _ _ _ _ 12 between between ADP IN _ _ _ _ _ 13 naive naive ADJ JJ Degree=Pos _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 allogeneic allogeneic ADJ JJ Degree=Pos _ _ _ _ 18 DC DC PROPN NNP Number=Sing _ _ _ _ 19 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 profound profound ADJ JJ Degree=Pos _ _ _ _ 23 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 alloreactive alloreactive ADJ JJ Degree=Pos _ _ _ _ 26 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 which which PRON WDT PronType=Rel _ _ _ _ 29 could could AUX MD VerbForm=Fin _ _ _ _ 30 be be AUX VB VerbForm=Inf _ _ _ _ 31 attributed attribute VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 defect defect NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 DC DC PROPN NNP Number=Sing _ _ _ _ 37 as as ADP IN _ _ _ _ _ 38 APC APC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 independent independent ADJ JJ Degree=Pos _ _ _ _ 41 T t NOUN NN Number=Sing _ _ _ _ 42 cell cell NOUN NN Number=Sing _ _ _ _ 43 responses response NOUN NNS Number=Plur _ _ _ _ 44 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 45 not not PART RB _ _ _ _ _ 46 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 47 by by ADP IN _ _ _ _ _ 48 NAC NAC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 8217 # text = Altogether, our results suggest that NAC might impair the generation of primary immune responses in humans through its inhibitory action on DC. 1 Altogether altogether ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 NAC NAC PROPN NNP Number=Sing _ _ _ _ 8 might might AUX MD VerbForm=Fin _ _ _ _ 9 impair impair VERB VB VerbForm=Inf _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 generation generation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 primary primary ADJ JJ Degree=Pos _ _ _ _ 14 immune immune ADJ JJ Degree=Pos _ _ _ _ 15 responses response NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 humans human NOUN NNS Number=Plur _ _ _ _ 18 through through ADP IN _ _ _ _ _ 19 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 21 action action NOUN NN Number=Sing _ _ _ _ 22 on on ADP IN _ _ _ _ _ 23 DC DC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8218 # text = Document 0030011365 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011365 0030011365 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8219 # text = Extracellular-regulated kinase 1/2, Jun N-terminal kinase, and c-Jun are involved in NF-kappa B-dependent IL-6 expression in human monocytes. 1 Extracellular Extracelular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 kinase kinase NOUN NN Number=Sing _ _ _ _ 5 1/2 1/2 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 Jun Jun PROPN NNP Number=Sing _ _ _ _ 8 N- N- SYM NFP _ _ _ _ SpaceAfter=No 9 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 10 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 Jun Jun PROPN NNP Number=Sing _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 involved involved ADJ JJ Degree=Pos _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa PROPN NNP Number=Sing _ _ _ _ 22 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 25 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 6 6 NUM CD NumType=Card _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8220 # text = In the present study we investigated the possible involvement of the mitogen-activated protein kinase family members extracellular-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) in mediating IL-6 gene expression in human monocytes, in particular their role in enhancing NF-kappa B activity. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 possible possible ADJ JJ Degree=Pos _ _ _ _ 9 involvement involvement NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 kinase kinase NOUN NN Number=Sing _ _ _ _ 17 family family NOUN NN Number=Sing _ _ _ _ 18 members member NOUN NNS Number=Plur _ _ _ _ 19 extracellular-regulated extracellular-regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 kinase kinase NOUN NN Number=Sing _ _ _ _ 21 1/2 1/2 NUM CD NumType=Card _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 ERK ERK NUM CD NumType=Card _ _ _ SpaceAfter=No 24 1/ 1/ SYM SYM _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 Jun Jun PROPN NNP Number=Sing _ _ _ _ 31 N- N- SYM NFP _ _ _ _ SpaceAfter=No 32 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 33 kinase kinase NOUN NN Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 JNK JNK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 mediating mediat ADJ JJ Degree=Pos _ _ _ _ 39 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 6 6 NUM CD NumType=Card _ _ _ _ 42 gene gene NOUN NN Number=Sing _ _ _ _ 43 expression expression NOUN NN Number=Sing _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 human human ADJ JJ Degree=Pos _ _ _ _ 46 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 particular particular ADJ JJ Degree=Pos _ _ _ _ 50 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 51 role role NOUN NN Number=Sing _ _ _ _ 52 in in SCONJ IN _ _ _ _ _ 53 enhancing enhance VERB VBG VerbForm=Ger _ _ _ _ 54 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 55 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 56 kappa kappa PROPN NNP Number=Sing _ _ _ _ 57 B b ADJ JJ Degree=Pos _ _ _ _ 58 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 8221 # text = Freshly isolated monocytes treated with the protein phosphatase inhibitor okadaic acid secreted high levels of IL-6 protein, which coincided with enhanced binding activity of NF-kappa B as well as with phosphorylation and activation of the ERK1/2 and JNK proteins. 1 Freshly freshly ADV RB _ _ _ _ _ 2 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 4 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 9 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 10 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 11 acid acid NOUN NN Number=Sing _ _ _ _ 12 secreted secret VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 high high ADJ JJ Degree=Pos _ _ _ _ 14 levels level NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 6 6 NUM CD NumType=Card _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 coincided coincide VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 binding binding VERB VBG VerbForm=Ger _ _ _ _ 26 activity activity NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappa kappa NOUN NN Number=Sing _ _ _ _ 31 B b NOUN NN Number=Sing _ _ _ _ 32 as as ADV RB _ _ _ _ _ 33 well well ADV RB Degree=Pos _ _ _ _ 34 as as ADP IN _ _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 activation activation NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 ERK ERK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 1/ 1/ SYM NFP _ _ _ _ SpaceAfter=No 43 2 2 NUM CD NumType=Card _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 JNK JNK NUM CD NumType=Card _ _ _ _ 46 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 8222 # text = The ERK pathway-specific inhibitor PD98059 inhibited IL-6 secretion from monocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ERK ERK PROPN NNP Number=Sing _ _ _ _ 3 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 7 PD98059 Pd98059 NOUN NN Number=Sing _ _ _ _ 8 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 6 6 NUM CD NumType=Card _ _ _ _ 12 secretion secretion NOUN NN Number=Sing _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 8223 # text = Transient overexpression of inactive mutants of either Raf-1 or JNK1 showed that both pathways were involved in kappa B-dependent IL-6 promoter activity. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 5 mutants mutant NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 either either CCONJ CC _ _ _ _ _ 8 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 JNK1 JNK1 PROPN NNP Number=Sing _ _ _ _ 13 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 both both DET DT _ _ _ _ _ 16 pathways pathway NOUN NNS Number=Plur _ _ _ _ 17 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 involved involved ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 kappa kappa PROPN NNP Number=Sing _ _ _ _ 21 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 24 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 6 6 NUM CD NumType=Card _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 8224 # text = By using PD98059, we demonstrated that the Raf1/MEK1/ERK1/2 pathway did not affect the DNA binding of NF-kappa B but, rather, acted at the level of transcriptional activity of NF-kappa B. 1 By by SCONJ IN _ _ _ _ _ 2 using use VERB VBG VerbForm=Ger _ _ _ _ 3 PD98059 PD98059 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 Raf1/MEK1/ Raf1/mek1/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ERK ERK NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 pathway pathway NOUN NN Number=Sing _ _ _ _ 15 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 affect affect VERB VB VerbForm=Inf _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 DNA dna NOUN NN Number=Sing _ _ _ _ 20 binding binding VERB VBG VerbForm=Ger _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ _ 26 but but CCONJ CC _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 rather rather ADV RB _ _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 acted act VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 at at ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 level level NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 36 activity activity NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 kappa kappa PROPN NNP Number=Sing _ _ _ _ 41 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 8225 # text = Interestingly, it was shown that NF-kappa B-mediated gene transcription, both in the context of the IL-6 promoter as well as on its own, was dependent on both serine kinase activity and interaction with c-Jun protein. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 both both CCONJ CC _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 context context NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 6 6 NUM CD NumType=Card _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ _ 26 as as ADV RB _ _ _ _ _ 27 well well ADV RB Degree=Pos _ _ _ _ 28 as as ADP IN _ _ _ _ _ 29 on on ADP IN _ _ _ _ _ 30 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 31 own own ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 34 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 35 on on ADP IN _ _ _ _ _ 36 both both DET DT _ _ _ _ _ 37 serine serine NOUN NN Number=Sing _ _ _ _ 38 kinase kinase NOUN NN Number=Sing _ _ _ _ 39 activity activity NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 interaction interaction NOUN NN Number=Sing _ _ _ _ 42 with with ADP IN _ _ _ _ _ 43 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 Jun Jun PROPN NNP Number=Sing _ _ _ _ 46 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 8226 # text = We conclude that okadaic acid-induced IL-6 gene expression is at least partly mediated through the ERK1/2 and JNK pathway-dependent activation of NF-kappa B transcriptional capacity. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 5 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 6 6 NUM CD NumType=Card _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 at at ADV RB _ _ _ _ _ 15 least least ADV RBS Degree=Sup _ _ _ _ 16 partly partly ADV RB _ _ _ _ _ 17 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 through through ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 ERK ERK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 1/ 1/ SYM NFP _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 JNK JNK PROPN NNP Number=Sing _ _ _ _ 25 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappa kappa PROPN NNP Number=Sing _ _ _ _ 33 B B PROPN NNP Number=Sing _ _ _ _ 34 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 35 capacity capacity NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 8227 # text = Our results suggest that the JNK pathway may regulate NF-kappa B-mediated gene transcription through its phosphorylation and activation of c-Jun. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 JNK JNK NOUN NN Number=Sing _ _ _ _ 7 pathway pathway NOUN NN Number=Sing _ _ _ _ 8 may may AUX MD VerbForm=Fin _ _ _ _ 9 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 through through ADP IN _ _ _ _ _ 19 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8228 # text = Document 0030011377 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011377 0030011377 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8229 # text = Differential effects of protein kinase C inhibitors on fibronectin-induced interleukin-beta gene transcription, protein synthesis and secretion in human monocytic cells. 1 Differential differential ADJ JJ Degree=Pos _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ _ 6 C c NOUN NN Number=Sing _ _ _ _ 7 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 fibronectin-induced fibronectin-induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 beta beta NOUN NN Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 secretion secretion NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8230 # text = Human monocytic cells express interleukin-1beta (IL-1beta) when stimulated with the extracellular matrix glycoprotein, fibronectin (FN). 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 interleukin interleukin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 beta beta NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 when when ADV WRB PronType=Int _ _ _ _ 15 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 19 matrix matrix NOUN NN Number=Sing _ _ _ _ 20 glycoprotein glycoprotein NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 fibronectin fibronectin NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 FN FN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 8231 # text = Protein kinase C (PKC) activation is considered important for this process; however, the metabolic steps at which PKC acts upon to mediate the FN-induced IL-1beta response remain unclear. 1 Protein protein NOUN NN Number=Sing _ _ _ _ 2 kinase kinase NOUN NN Number=Sing _ _ _ _ 3 C C PROPN NNP Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 considered consider VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 important important ADJ JJ Degree=Pos _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 13 process process NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ; ; PUNCT , _ _ _ _ _ 15 however however ADV RB _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 metabolic metabolic ADJ JJ Degree=Pos _ _ _ _ 19 steps step NOUN NNS Number=Plur _ _ _ _ 20 at at ADP IN _ _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 PKC PKC PROPN NNP Number=Sing _ _ _ _ 23 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 upon upon ADP IN _ _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 FN Fn NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 bet bet NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 response response NOUN NN Number=Sing _ _ _ _ 37 remain remain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 38 unclear unclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 8232 # text = We performed an analysis of the mechanisms by which two PKC inhibitors, Calphostin C and Staurosporine, prevent the FN-induced IL-1beta response. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 performed perform VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 which which DET WDT PronType=Int _ _ _ _ 10 two two NUM CD NumType=Card _ _ _ _ 11 PKC Pkc NOUN NN Number=Sing _ _ _ _ 12 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 Calphostin Calphostin PROPN NNP Number=Sing _ _ _ _ 15 C C PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 Staurosporine Staurosporine PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 prevent prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 FN Fn NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 beta beta NOUN NN Number=Sing _ _ _ _ 28 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 8233 # text = Both inhibitors blocked the secretion of IL-1beta protein into the media of peripheral blood mononuclear cells exposed to FN. 1 Both both DET DT _ _ _ _ _ 2 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 3 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 secretion secretion NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 beta beta NOUN NN Number=Sing _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 into into ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 media media NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 16 blood blood NOUN NN Number=Sing _ _ _ _ 17 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 exposed expose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 FN FN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 8234 # text = Immunoprecipitation analysis revealed that under these circumstances, Calphostin C inhibited the production of IL-1beta protein, whereas Staurosporine allowed protein production, but inhibited its secretion. 1 Immunoprecipitation Immunoprecipitation NOUN NN Number=Sing _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 under under ADP IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 circumstances circumstance NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 Calphostin Calphostin PROPN NNP Number=Sing _ _ _ _ 10 C C PROPN NNP Number=Sing _ _ _ _ 11 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 production production NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 beta beta NOUN NN Number=Sing _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 whereas whereas SCONJ IN _ _ _ _ _ 21 Staurosporine Staurosporine PROPN NNP Number=Sing _ _ _ _ 22 allowed allow VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ _ 24 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 but but CCONJ CC _ _ _ _ _ 27 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 29 secretion secretion NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 8235 # text = To determine the mechanisms responsible for these differences, we turned to human U937 promonocytic cells. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 differences difference NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 turned turn VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 human human VERB VB VerbForm=Inf _ _ _ _ 14 U937 U937 NUM CD NumType=Card _ _ _ _ 15 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 8236 # text = U937 cells transfected with the human full-length IL-1beta promoter connected to a luciferase reporter gene were submitted to transcription assays, Northern blotting, and DNA electrophoresis mobility gel shift assays. 1 U937 U937 NUM CD NumType=Card _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 full full ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 length length NOUN NN Number=Sing _ _ _ _ 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 beta beta NOUN NN Number=Sing _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 connected connect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 19 reporter reporter NOUN NN Number=Sing _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 submitted submit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 28 blotting blotting NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 DNA dna NOUN NN Number=Sing _ _ _ _ 32 electrophoresis electrophoresis NOUN NN Number=Sing _ _ _ _ 33 mobility mobility NOUN NN Number=Sing _ _ _ _ 34 gel gel NOUN NN Number=Sing _ _ _ _ 35 shift shift NOUN NN Number=Sing _ _ _ _ 36 assays assays NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 8237 # text = These studies revealed that Calphostin C inhibited the nuclear translocation of the transcription factor activator protein-1 (AP-1) which is considered necessary for FN induction of IL-1beta gene transcription, and prevented the transcription of the IL-1beta gene. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Calphostin Calphostin PROPN NNP Number=Sing _ _ _ _ 6 C C PROPN NNP Number=Sing _ _ _ _ 7 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 translocation translocation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 activator activator CCONJ CC _ _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 considered consider VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 FN Fn ADJ JJ Degree=Pos _ _ _ _ 30 induction induction NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 beta beta NOUN NN Number=Sing _ _ _ _ 35 gene gene NOUN NN Number=Sing _ _ _ _ 36 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 transcription transcription NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 47 beta beta NOUN NN Number=Sing _ _ _ _ 48 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 8238 # text = In contrast, Staurosporine alone induced AP-1 translocation and stimulation of the gene. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 Staurosporine Staurosporine PROPN NNP Number=Sing _ _ _ _ 5 alone alone ADJ JJ Degree=Pos _ _ _ _ 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 translocation translocation NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 8239 # text = Overall, our data indicate that Calphostin C prevents the transcription of the IL-1beta gene thereby inhibiting protein synthesis. 1 Overall overall ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 data data NOUN NN Number=Sing _ _ _ _ 5 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 Calphostin Calphostin PROPN NNP Number=Sing _ _ _ _ 8 C C PROPN NNP Number=Sing _ _ _ _ 9 prevents prevent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 beta beta NOUN NN Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 thereby thereby ADV RB _ _ _ _ _ 19 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 8240 # text = Based on the high specificity of this compound for PKC, we conclude that PKC is necessary for FN-induced IL-1beta protein production. 1 Based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 on on ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 high high ADJ JJ Degree=Pos _ _ _ _ 5 specificity specificity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 compound compound NOUN NN Number=Sing _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 13 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 PKC PKC PROPN NNP Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 FN FN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 beta beta NOUN NN Number=Sing _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ _ 27 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 8241 # text = In contrast, Staurosporine prevented secretion of IL-1beta by unknown mechanisms. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 Staurosporine Staurosporine PROPN NNP Number=Sing _ _ _ _ 5 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 secretion secretion NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 beta beta NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 unknown unknown ADJ JJ Degree=Pos _ _ _ _ 13 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8242 # text = Document 0030011379 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011379 0030011379 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8243 # text = Dependence for the proliferative response to erythropoietin on an established erythroid differentiation program in a human hematopoietic cell line, UT-7. 1 Dependence Dependence NOUN NN Number=Sing _ _ _ _ 2 for for ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 5 response response NOUN NN Number=Sing _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 erythropoietin erythropoietin VERB VB VerbForm=Inf _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 established establish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 erythroid erythroid NOUN NN Number=Sing _ _ _ _ 12 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 13 program program NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8244 # text = Erythroid differentiation involves the activation of a number of erythroid-specific genes, most of which, including the globin genes and the erythropoietin receptor (Epo-R) gene, are, at least in part, regulated by the transcription factor GATA-1. 1 Erythroid Erythroid ADJ JJ Degree=Pos _ _ _ _ 2 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 3 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 number number NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 most most ADJ JJS Degree=Sup _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 which which PRON WDT PronType=Int _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 including include VERB VBG VerbForm=Ger _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 globin globin NOUN NN Number=Sing _ _ _ _ 22 genes gene NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 erythropoietin erythropoietin ADJ JJ Degree=Pos _ _ _ _ 26 receptor receptor NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 Epo Epo PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 R R PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 at at ADV RB _ _ _ _ _ 37 least least ADV RBS Degree=Sup _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 part part NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 by by ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 transcription transcription NOUN NN Number=Sing _ _ _ _ 45 factor factor NOUN NN Number=Sing _ _ _ _ 46 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 8245 # text = In order to understand the relationship, if any, between expression of GATA-1, response to Epo and erythroid differentiation, we analyzed the expression of GATA-1, Epo-R and globin genes in an Epo-dependent human cell line, UT-7 Epo. 1 In in ADP IN _ _ _ _ _ 2 order order NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 understand understand VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 relationship relationship NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 if if SCONJ IN _ _ _ _ _ 9 any any DET DT _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 between between ADP IN _ _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 response response NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 Epo Epo PROPN NNP Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 23 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 26 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 Epo Epo PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 -R -r PROPN NNP Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 globin globin ADJ JJ Degree=Pos _ _ _ _ 38 genes gene NOUN NNS Number=Plur _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 41 Epo-dependent Epo-dependent ADJ JJ Degree=Pos _ _ _ _ 42 human human ADJ JJ Degree=Pos _ _ _ _ 43 cell cell NOUN NN Number=Sing _ _ _ _ 44 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 7 7 NUM CD NumType=Card _ _ _ _ 49 Epo Epo NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 8246 # text = The results were compared to those obtained with the parental granulocyte-macrophage colony-stimulating factor (GM-CSF)-dependent cell line, UT-7, which has a predominantly megakaryoblastic phenotype and is unable to proliferate continuously in the presence of Epo. UT-7 Epo and UT-7 expressed similar levels of GATA-1 mRNA and binding activity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 compared compare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 7 obtained obtain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 parental parental ADJ JJ Degree=Pos _ _ _ _ 11 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 14 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 GM-CSF GM-CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 which which PRON WDT PronType=Rel _ _ _ _ 31 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 predominantly predominantly ADV RB _ _ _ _ _ 34 megakaryoblastic megakaryoblastic ADJ JJ Degree=Pos _ _ _ _ 35 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 unable unable ADJ JJ Degree=Pos _ _ _ _ 39 to to PART TO _ _ _ _ _ 40 proliferate proliferate VERB VB VerbForm=Inf _ _ _ _ 41 continuously continuously ADV RB _ _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 presence presence NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 Epo. Epo. PROPN NNP Number=Sing _ _ _ _ 47 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 -7 -7 NUM CD NumType=Card _ _ _ _ 49 Epo Epo PROPN NNP Number=Sing _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 UT ut PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT , _ _ _ _ SpaceAfter=No 53 7 7 NUM CD NumType=Card _ _ _ _ 54 expressed expressed VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 55 similar similar ADJ JJ Degree=Pos _ _ _ _ 56 levels level NOUN NNS Number=Plur _ _ _ _ 57 of of ADP IN _ _ _ _ _ 58 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 59 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 60 1 1 NUM CD NumType=Card _ _ _ _ 61 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 62 and and CCONJ CC _ _ _ _ _ 63 binding bind VERB VBG VerbForm=Ger _ _ _ _ 64 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 65 . . PUNCT . _ _ _ _ _ # sent_id = 8247 # text = The two lines also expressed comparable levels of Epo-R mRNA while the number of Epo-binding sites on UT-7 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 lines line NOUN NNS Number=Plur _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 comparable comparable ADJ JJ Degree=Pos _ _ _ _ 7 levels level NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 Epo Epo PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 -R -R PROPN NNP Number=Sing _ _ _ _ 11 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 12 while while SCONJ IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 number number NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 Epo- Epo- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 sites site NOUN NNS Number=Plur _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 -7 -7 NUM CD NumType=Card _ _ _ _ # sent_id = 8248 # text = Epo cells was one-sixth the number of UT-7 cells (2400 +/- 3 vs. 13,800 +/- 300). 1 Epo Epo ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 one one NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 sixth sixth SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 number number NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 7 7 NUM CD NumType=Card _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 2400 2400 NUM CD NumType=Card _ _ _ _ 16 +/- +/- SYM SYM _ _ _ _ _ 17 3 3 NUM CD NumType=Card _ _ _ _ 18 vs. vs. NOUN NNS Number=Plur _ _ _ _ 19 13,800 13,800 NUM CD NumType=Card _ _ _ _ 20 +/- +/- SYM SYM _ _ _ _ _ 21 300 300 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 8249 # text = This difference in the number of binding sites could be due to differences in cell surface (UT-7 cells are 20% smaller than the parental UT-7 cells) or in receptor turnover. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 difference difference NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 number number NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 binding binding ADJ JJ Degree=Pos _ _ _ _ 8 sites site NOUN NNS Number=Plur _ _ _ _ 9 could could AUX MD VerbForm=Fin _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 due due ADP IN _ _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 differences difference NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 surface surface NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 7 7 NUM CD NumType=Card _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 % % SYM NN Number=Sing _ _ _ _ 25 smaller smaller ADJ JJR Degree=Cmp _ _ _ _ 26 than than ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 parental parental ADJ JJ Degree=Pos _ _ _ _ 29 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 7 7 NUM CD NumType=Card _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 or or CCONJ CC _ _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 receptor receptor NOUN NN Number=Sing _ _ _ _ 37 turnover turnover NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 8250 # text = By Northern analysis, UT-7 cells expressed detectable levels of beta- and gamma-globin but not alpha-globin. 1 By by ADP IN _ _ _ _ _ 2 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 7 7 NUM CD NumType=Card _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 globin globin NOUN NN Number=Sing _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 globin globin NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 8251 # text = In comparison, UT-7 1 In in ADP IN _ _ _ _ _ 2 comparison comparison NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 -7 -7 NUM CD NumType=Card _ _ _ _ # sent_id = 8252 # text = Epo cells expressed alpha-globin and higher levels of gamma-globin (5-fold) and beta-globin (from barely to clearly detectable). 1 Epo Epo PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 globin globin ADJ JJ Degree=Pos _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 higher higher ADJ JJ Degree=Pos _ _ _ _ 9 levels level NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 globin globin NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 globin globin NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 from from ADP IN _ _ _ _ _ 25 barely barely ADV RB _ _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 clearly clearly ADV RB _ _ _ _ _ 28 detectable detectable ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 8253 # text = Globin chains (alpha, beta and gamma) were clearly detectable by affinity chromatography in UT-7 1 Globin Globin ADJ JJ Degree=Pos _ _ _ _ 2 chains chain NOUN NNS Number=Plur _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 beta beta NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 clearly clearly ADV RB _ _ _ _ _ 12 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 affinity affinity NOUN NN Number=Sing _ _ _ _ 15 chromatography chromatography NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 -7 -7 NUM CD NumType=Card _ _ _ _ # sent_id = 8254 # text = Epo but not in UT-7 cells. 1 Epo Epo PROPN NNP Number=Sing _ _ _ _ 2 but but CCONJ CC _ _ _ _ _ 3 not not PART RB _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 7 7 NUM CD NumType=Card _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 8255 # text = The frequency of the cells which expressed beta- and gamma- globin genes in the two cell populations was measured by immunofluorescence with beta- and gamma-specific antibodies. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 frequency frequency NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ _ 13 globin globin NOUN NN Number=Sing _ _ _ _ 14 genes gene NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 two two NUM CD NumType=Card _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 populations population NOUN NNS Number=Plur _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 measured measure VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 immunofluorescence immunofluorescence NOUN NN Number=Sing _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 specific specific ADJ JJ Degree=Pos _ _ _ _ 31 antibodies antibody NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 8256 # text = The number of gamma-positive cells and their fluorescence intensity were higher in UT-7 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 number number NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 positive positive ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 10 fluorescence fluorescence NOUN NN Number=Sing _ _ _ _ 11 intensity intensity NOUN NN Number=Sing _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 higher higher ADJ JJR Degree=Cmp _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 -7 -7 NUM CD NumType=Card _ _ _ _ # sent_id = 8257 # text = Epo than in UT-7 cells (0 to 17% barely positive cells and 23 to 40% clearly positive cells, respectively), indicating that the increase in globin mRNA observed in UT-7 1 Epo Epo ADV RB _ _ _ _ _ 2 than than ADP IN _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 7 7 NUM CD NumType=Card _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 0 0 NUM CD NumType=Card _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 17 17 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 % % SYM NN Number=Sing _ _ _ _ 13 barely barely ADV RB _ _ _ _ _ 14 positive positive ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 23 23 NUM CD NumType=Card _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 % % SYM NN Number=Sing _ _ _ _ 21 clearly clearly ADV RB _ _ _ _ _ 22 positive positive ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 29 that that SCONJ IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 increase increase NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 globin globin PROPN NNP Number=Sing _ _ _ _ 34 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 35 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 -7 -7 NUM CD NumType=Card _ _ _ _ # sent_id = 8258 # text = Epo is due to both an increase of gene expression per cell and an increase in numbers of cells containing gamma-globin. 1 Epo Epo PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 due due ADP IN _ _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 both both CCONJ CC _ _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 increase increase NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 per per ADP IN _ _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 increase increase NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 numbers number NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 containing contain VERB VBG VerbForm=Ger _ _ _ _ 21 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 globin globin NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 8259 # text = The levels of GATA-1, Epo-R and globin mRNA expressed were not affected by a 24-hour incubation of either cell line with Epo, GM-CSF or interleukin-3 (IL-3). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 Epo Epo PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 -R -R PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 globin globin PROPN NNP Number=Sing _ _ _ _ 12 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 13 expressed express VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 24 24 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 hour hour NOUN NN Number=Sing _ _ _ _ 22 incubation incubation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 either either DET DT _ _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 line line NOUN NN Number=Sing _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 Epo Epo PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 CSF CSF PROPN NNP Number=Sing _ _ _ _ 33 or or CCONJ CC _ _ _ _ _ 34 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 3 3 NUM CD NumType=Card _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 8260 # text = (ABSTRACT TRUNCATED AT 400 WORDS) 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 ABSTRACT ABSTRACT X GW _ _ _ _ _ 3 TRUNCATED Truncate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 AT at ADV RB _ _ _ _ _ 5 400 400 NUM CD NumType=Card _ _ _ _ 6 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8261 # text = Document 0030011381 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011381 0030011381 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8262 # text = Epstein-Barr viral latency is disrupted by the immediate-early BRLF1 protein through a cell-specific mechanism. 1 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 Barr Barr PROPN NNP Number=Sing _ _ _ _ 4 viral viral ADJ JJ Degree=Pos _ _ _ _ 5 latency latency NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 disrupted disrupt VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 early early ADJ JJ Degree=Pos _ _ _ _ 13 BRLF1 Brlf1 NUM CD NumType=Card _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 through through ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8263 # text = Epstein-Barr virus (EBV), the causative agent of infectious mononucleosis, is a human herpesvirus associated with epithelial cell malignancies (nasopharyngeal carcinoma) as well as B-cell malignancies. 1 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 Barr Barr PROPN NNP Number=Sing _ _ _ _ 4 virus virus NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 causative causative ADJ JJ Degree=Pos _ _ _ _ 11 agent agent NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 infectious infectious ADJ JJ Degree=Pos _ _ _ _ 14 mononucleosis mononucleosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 herpesvirus herpesvirus NOUN NN Number=Sing _ _ _ _ 20 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 malignancies malignancy NOUN NNS Number=Plur _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 nasopharyngeal nasopharyngeal ADJ JJ Degree=Pos _ _ _ _ 27 carcinoma carcinoma NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 as as ADV RB _ _ _ _ _ 30 well well ADV RB Degree=Pos _ _ _ _ 31 as as ADP IN _ _ _ _ _ 32 B b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 malignancies malignancy NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 8264 # text = Understanding how viral latency is disrupted is a central issue in herpesvirus biology. 1 Understanding understand VERB VBG VerbForm=Ger _ _ _ _ 2 how how ADV WRB PronType=Int _ _ _ _ 3 viral viral ADJ JJ Degree=Pos _ _ _ _ 4 latency latency NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 disrupted disrupt VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 central central ADJ JJ Degree=Pos _ _ _ _ 10 issue issue NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 herpesvirus herpesvirus NOUN NN Number=Sing _ _ _ _ 13 biology biology NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 8265 # text = Epithelial cells are the major site of lytic EBV replication within the human host, and viral reactivation occurs in EBV-associated nasopharyngeal carcinomas. 1 Epithelial Epithelial ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 major major ADJ JJ Degree=Pos _ _ _ _ 6 site site NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 9 EBV EBV PROPN NNP Number=Sing _ _ _ _ 10 replication replication NOUN NN Number=Sing _ _ _ _ 11 within within ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 host host NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 viral viral ADJ JJ Degree=Pos _ _ _ _ 18 reactivation reactivation NOUN NN Number=Sing _ _ _ _ 19 occurs occur NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 nasopharyngeal nasopharyngeal ADJ JJ Degree=Pos _ _ _ _ 25 carcinomas carcinoma NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 8266 # text = It is known that expression of a single viral immediate-early protein, BZLF1, is sufficient to initiate the switch from latent to lytic infection in B cells. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 single single ADJ JJ Degree=Pos _ _ _ _ 9 viral viral ADJ JJ Degree=Pos _ _ _ _ 10 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 early early ADJ JJ Degree=Pos _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 BZLF1 BZLF1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 initiate initiate VERB VB VerbForm=Inf _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 switch switch NOUN NN Number=Sing _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 latent latent NOUN NN Number=Sing _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 27 infection infection NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 B b ADJ JJ Degree=Pos _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 8267 # text = Cellular regulation of BZLF1 transcription is therefore thought to play a key role in regulating the stringency of viral latency. 1 Cellular celular ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 BZLF1 BZLF1 NUM CD NumType=Card _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 therefore therefore ADV RB _ _ _ _ _ 8 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 play play VERB VB VerbForm=Inf _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 key key ADJ JJ Degree=Pos _ _ _ _ 13 role role NOUN NN Number=Sing _ _ _ _ 14 in in SCONJ IN _ _ _ _ _ 15 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 stringency stringency NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 viral viral ADJ JJ Degree=Pos _ _ _ _ 20 latency latency NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 8268 # text = Here we show that, unexpectedly, expression of another viral immediate-early protein, BRLF1, can disrupt viral latency in an epithelial cell-specific fashion. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 unexpectedly unexpectedly ADV RB _ _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 another another DET DT _ _ _ _ _ 11 viral viral ADJ JJ Degree=Pos _ _ _ _ 12 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 early early ADJ JJ Degree=Pos _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 BRLF1 BRLF1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 can can AUX MD VerbForm=Fin _ _ _ _ 20 disrupt disrupt VERB VB VerbForm=Inf _ _ _ _ 21 viral viral ADJ JJ Degree=Pos _ _ _ _ 22 latency latency NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 28 fashion fashion NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 8269 # text = Therefore, the mechanisms leading to disruption of EBV latency appear to be cell-type specific. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 leading lead VERB VBG VerbForm=Ger _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 disruption disruption NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 EBV EBV PROPN NNP Number=Sing _ _ _ _ 10 latency latency NOUN NN Number=Sing _ _ _ _ 11 appear appear VERB VB VerbForm=Inf _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 type type NOUN NN Number=Sing _ _ _ _ 17 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8270 # text = Document 0030011382 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011382 0030011382 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8271 # text = Regulation of c-jun mRNA expression by hydroxyurea in human K562 cells during erythroid differentiation [published erratum appears in Biochim Biophys Acta 1995 Dec 27;1264(3):409] 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 c- c- SYM NFP _ _ _ _ SpaceAfter=No 4 jun jun NOUN NN Number=Sing _ _ _ _ 5 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 hydroxyurea hydroxyurea NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 K562 K562 NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 during during ADP IN _ _ _ _ _ 14 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 16 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 published publish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 erratum erratum NOUN NN Number=Sing _ _ _ _ 19 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 Biochim Biochim PROPN NNP Number=Sing _ _ _ _ 22 Biophys Biophys PROPN NNP Number=Sing _ _ _ _ 23 Acta Acta PROPN NNP Number=Sing _ _ _ _ 24 1995 1995 NUM CD NumType=Card _ _ _ _ 25 Dec Dec PROPN NNP Number=Sing _ _ _ _ 26 27;1264 27;1264 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 :409 :409 NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 8272 # text = Hydroxyurea (HU) is an antitumor agent which also induces hemoglobinization during erythroid differentiation. 1 Hydroxyurea Hydroxyurea PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 HU Hu PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 antitumor antitumor ADJ JJ Degree=Pos _ _ _ _ 8 agent agent NOUN NN Number=Sing _ _ _ _ 9 which which PRON WDT PronType=Rel _ _ _ _ 10 also also ADV RB _ _ _ _ _ 11 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 hemoglobinization hemoglobinization NOUN NN Number=Sing _ _ _ _ 13 during during ADP IN _ _ _ _ _ 14 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 8273 # text = In addition, HU stimulates the synthesis of fetal hemoglobin in sickle cell anemia patients. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 HU Hu PRON PRP Case=Nom|Person=2|PronType=Prs _ _ _ _ 5 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 10 hemoglobin hemoglobin NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 sickle sickle ADJ JJ Degree=Pos _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 anemia anemia ADP IN _ _ _ _ _ 15 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 8274 # text = To further understand its mechanism of action, we investigated the effects of HU on regulation of c-jun expression prior to the onset of erythroid differentiation of K562 cells. 1 To to PART TO _ _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 understand understand VERB VB VerbForm=Inf _ _ _ _ 4 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 5 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 action action NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 10 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 effects effect NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 HU Hu PRON PRP Case=Acc|Person=2|PronType=Prs _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 regulation regulation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 c- c- SYM NFP _ _ _ _ SpaceAfter=No 19 jun jun NOUN NN Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 prior prior ADJ JJ Degree=Pos _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 onset onset NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 27 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 K562 K562 NUM CD NumType=Card _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 8275 # text = HU induced a dose-dependent stimulation of c-jun synthesis. 1 HU Hu PRON PRP Case=Nom|Person=2|PronType=Prs _ _ _ _ 2 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 7 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 c- c- SYM NFP _ _ _ _ SpaceAfter=No 10 jun jun NOUN NN Number=Sing _ _ _ _ 11 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 8276 # text = The levels of c-jun mRNA was elevated 4 to 7.5-fold by HU within 2 h. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 c- c- SYM NFP _ _ _ _ SpaceAfter=No 5 jun jun PROPN NNP Number=Sing _ _ _ _ 6 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 elevated elevate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 4 4 NUM CD NumType=Card _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 7.5 7.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 fold fold VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 HU Hu PROPN NNP Number=Sing _ _ _ _ 16 within within ADP IN _ _ _ _ _ 17 2 2 NUM CD NumType=Card _ _ _ _ 18 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 8277 # text = This was followed by a gradual decline to the basal level by 24 h. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 followed follow VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 gradual gradual ADJ JJ Degree=Pos _ _ _ _ 7 decline decline NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 basal basal ADJ JJ Degree=Pos _ _ _ _ 11 level level NOUN NN Number=Sing _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 24 24 NUM CD NumType=Card _ _ _ _ 14 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 8278 # text = Both nuclear run-on and actinomycin D pulse experiments strongly indicate that HU regulates c-jun mRNA expression by increasing the rate of synthesis as well as stabilizing the c-jun mRNA. 1 Both both DET DT _ _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 run run NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 on on ADJ JJ Degree=Pos _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 actinomycin actinomycin ADJ JJ Degree=Pos _ _ _ _ 8 D D NOUN NN Number=Sing _ _ _ _ 9 pulse pulse NOUN NN Number=Sing _ _ _ _ 10 experiments experiment NOUN NNS Number=Plur _ _ _ _ 11 strongly strongly ADV RB _ _ _ _ _ 12 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 HU Hu PROPN NNP Number=Sing _ _ _ _ 15 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 c- c- PUNCT , _ _ _ _ SpaceAfter=No 17 jun jun VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 18 mRNA mRNa DET DT Definite=Ind|PronType=Art _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 by by SCONJ IN _ _ _ _ _ 21 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 rate rate NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 26 as as ADV RB _ _ _ _ _ 27 well well ADV RB Degree=Pos _ _ _ _ 28 as as SCONJ IN _ _ _ _ _ 29 stabilizing stabilize VERB VBG VerbForm=Ger _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 c- c- SYM NFP _ _ _ _ SpaceAfter=No 32 jun jun PROPN NNP Number=Sing _ _ _ _ 33 mRNA mRNa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 8279 # text = In addition, the level of jun protein was elevated by 2 to 5-fold within 4 h in HU treated cells. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 level level NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 jun jun NOUN NN Number=Sing _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 elevated elevate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 2 2 NUM CD NumType=Card _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 fold fold NOUN NN Number=Sing _ _ _ _ 17 within within ADP IN _ _ _ _ _ 18 4 4 NUM CD NumType=Card _ _ _ _ 19 h h NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 HU Hu PROPN NNP Number=Sing _ _ _ _ 22 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 8280 # text = Furthermore, concentrations of HU below 250 microM slightly increased the 5X AP-1/CAT activity. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 HU Hu PROPN NNP Number=Sing _ _ _ _ 6 below below ADV RB _ _ _ _ _ 7 250 250 NUM CD NumType=Card _ _ _ _ 8 microM microm PROPN NNP Number=Sing _ _ _ _ 9 slightly slightly ADV RB _ _ _ _ _ 10 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 5X 5X PROPN NNP Number=Sing _ _ _ _ 13 AP ap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1/ 1ith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 16 CAT cat ADJ JJ Degree=Pos _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 8281 # text = These results strongly suggest that HU induces both transcriptional and post-transcription regulation of c-jun during erythroid differentiation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 strongly strongly ADV RB _ _ _ _ _ 4 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 HU Hu PROPN NNP Number=Sing _ _ _ _ 7 induces induce NOUN NNS Number=Plur _ _ _ _ 8 both both CCONJ CC _ _ _ _ _ 9 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 post post X AFX _ _ _ _ SpaceAfter=No 12 -transcription -transcription NOUN NN Number=Sing _ _ _ _ 13 regulation regulation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 c- c- SYM NFP _ _ _ _ SpaceAfter=No 16 jun jun NOUN NN Number=Sing _ _ _ _ 17 during during ADP IN _ _ _ _ _ 18 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 19 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8282 # text = Document 0030011392 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011392 0030011392 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8283 # text = Lymphocytes from CML patients lack a 47 kDa factor having affinity for a genomic sterol regulatory sequence. 1 Lymphocytes Lymphocyte NOUN NNS Number=Plur _ _ _ _ 2 from from ADP IN _ _ _ _ _ 3 CML CML PROPN NNP Number=Sing _ _ _ _ 4 patients patient NOUN NNS Number=Plur _ _ _ _ 5 lack lack VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 47 47 NUM CD NumType=Card _ _ _ _ 8 kDa kDa NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 having have VERB VBG VerbForm=Ger _ _ _ _ 11 affinity affinity NOUN NN Number=Sing _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 15 sterol sterol NOUN NN Number=Sing _ _ _ _ 16 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 17 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8284 # text = Deranged cellular cholesterol homeostasis has been widely recognized in the initiation as well as progression of various types of cancers including chronic myeloid leukaemia (CML). 1 Deranged Derange VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 3 cholesterol cholesterol NOUN NN Number=Sing _ _ _ _ 4 homeostasis homeostasis NOUN NN Number=Sing _ _ _ _ 5 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 7 widely widely ADV RB _ _ _ _ _ 8 recognized recognize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 initiation initiation NOUN NN Number=Sing _ _ _ _ 12 as as ADV RB _ _ _ _ _ 13 well well ADV RB Degree=Pos _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 progression progression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 various various ADJ JJ Degree=Pos _ _ _ _ 18 types type NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 cancers cancer NOUN NNS Number=Plur _ _ _ _ 21 including include VERB VBG VerbForm=Ger _ _ _ _ 22 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 23 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 24 leukaemia leukaemia NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 CML CML NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 8285 # text = Since the human genomic sterol regulatory element (SRE) has been shown to regulate various key genes involved in this phenomenon, the present study revealed the existence of a unique 47 kDa protein factor having affinity for this SRE sequence in lymphocytes from normal subjects, as well as its absence in lymphocytes from untreated CML patients. 1 Since since SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 5 sterol sterol NOUN NN Number=Sing _ _ _ _ 6 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 7 element element NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 SRE SRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 13 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 16 various various ADJ JJ Degree=Pos _ _ _ _ 17 key key ADJ JJ Degree=Pos _ _ _ _ 18 genes gene NOUN NNS Number=Plur _ _ _ _ 19 involved involved ADJ JJ Degree=Pos _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 22 phenomenon phenomenon NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 present present ADJ JJ Degree=Pos _ _ _ _ 26 study study NOUN NN Number=Sing _ _ _ _ 27 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 existence existence NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 unique unique ADJ JJ Degree=Pos _ _ _ _ 33 47 47 NUM CD NumType=Card _ _ _ _ 34 kDa kDa PROPN NNP Number=Sing _ _ _ _ 35 protein protein NOUN NN Number=Sing _ _ _ _ 36 factor factor NOUN NN Number=Sing _ _ _ _ 37 having have VERB VBG VerbForm=Ger _ _ _ _ 38 affinity affinity NOUN NN Number=Sing _ _ _ _ 39 for for ADP IN _ _ _ _ _ 40 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 41 SRE Sre NOUN NN Number=Sing _ _ _ _ 42 sequence sequence NOUN NN Number=Sing _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 45 from from ADP IN _ _ _ _ _ 46 normal normal ADJ JJ Degree=Pos _ _ _ _ 47 subjects subjects NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 as as ADV RB _ _ _ _ _ 50 well well ADV RB Degree=Pos _ _ _ _ 51 as as ADP IN _ _ _ _ _ 52 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 53 absence absence NOUN NN Number=Sing _ _ _ _ 54 in in ADP IN _ _ _ _ _ 55 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 56 from from ADP IN _ _ _ _ _ 57 untreated untreated ADJ JJ Degree=Pos _ _ _ _ 58 CML cml NOUN NN Number=Sing _ _ _ _ 59 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 8286 # text = However, this factor appeared when these CML patients achieved complete haematological remission (CHR) through alpha-interferon therapy. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 when when ADV WRB PronType=Int _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 CML cml ADJ JJ Degree=Pos _ _ _ _ 9 patients patient NOUN NNS Number=Plur _ _ _ _ 10 achieved achieve VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 complete complete ADJ JJ Degree=Pos _ _ _ _ 12 haematological haematological ADJ JJ Degree=Pos _ _ _ _ 13 remission remission NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 CHR CHR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 through through ADP IN _ _ _ _ _ 18 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 interferon interferon ADJ JJ Degree=Pos _ _ _ _ 21 therapy therapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 8287 # text = Furthermore, an inverse relationship was also observed between the LDL receptor gene expression at the transcriptional level and the binding affinity of this 47 kDa protein factor to the SRE sequence. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 inverse inverse ADJ JJ Degree=Pos _ _ _ _ 5 relationship relationship NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 between between ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 LDL Ldl ADJ JJ Degree=Pos _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 at at ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 level level NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 binding bind VERB VBG VerbForm=Ger _ _ _ _ 22 affinity affinity NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 25 47 47 NUM CD NumType=Card _ _ _ _ 26 kDa kDa PROPN NNP Number=Sing _ _ _ _ 27 protein protein NOUN NN Number=Sing _ _ _ _ 28 factor factor NOUN NN Number=Sing _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 SRE Sre PROPN NNP Number=Sing _ _ _ _ 32 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 8288 # text = Based upon these results we propose that this factor may have a role in pathophysiology of chronic myeloid leukaemia. 1 Based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 upon upon ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 may may AUX MD VerbForm=Fin _ _ _ _ 11 have have VERB VB VerbForm=Inf _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 role role NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 pathophysiology pathophysiology NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 18 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 19 leukaemia leukaemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8289 # text = Document 0030011394 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011394 0030011394 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8290 # text = Positive regulators of the lineage-specific transcription factor GATA-1 in differentiating erythroid cells. 1 Positive positive ADJ JJ Degree=Pos _ _ _ _ 2 regulators regulator NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 in in SCONJ IN _ _ _ _ _ 14 differentiating differentiat VERB VBG VerbForm=Ger _ _ _ _ 15 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8291 # text = The zinc finger transcription factor GATA-1 is a major regulator of gene expression in erythroid, megakaryocyte, and mast cell lineages. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 zinc zinc NOUN NN Number=Sing _ _ _ _ 3 finger finger NOUN NN Number=Sing _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 GATA GATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 major major ADJ JJ Degree=Pos _ _ _ _ 12 regulator regulator NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 erythroid erythroid NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 megakaryocyte megakaryocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 mast mast ADJ JJ Degree=Pos _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8292 # text = GATA-1 binds to WGATAR consensus motifs in the regulatory regions of virtually all erythroid cell-specific genes. 1 GATA GATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 binds bind NOUN NNS Number=Plur _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 WGATAR Wgatar VERB VB VerbForm=Inf _ _ _ _ 7 consensus consensus NOUN NN Number=Sing _ _ _ _ 8 motifs motif NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 12 regions region NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 virtually virtually ADV RB _ _ _ _ _ 15 all all DET DT _ _ _ _ _ 16 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 8293 # text = Analyses with cultured cells and cell-free systems have provided strong evidence that GATA-1 is involved in control of globin gene expression during erythroid differentiation. 1 Analyses analysis NOUN NNS Number=Plur _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 cultured culture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 free free ADJ JJ Degree=Pos _ _ _ _ 9 systems system NOUN NNS Number=Plur _ _ _ _ 10 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 provided provide VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 strong strong ADJ JJ Degree=Pos _ _ _ _ 13 evidence evidence NOUN NN Number=Sing _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 involved involved ADJ JJ Degree=Pos _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 control control NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 globin globin ADJ JJ Degree=Pos _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 during during ADP IN _ _ _ _ _ 27 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 28 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 8294 # text = Targeted mutagenesis of the GATA-1 gene in embryonic stem cells has demonstrated its requirement in normal erythroid development. 1 Targeted target VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 mutagenesis mutagenesis PRON DT Number=Sing|PronType=Dem _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 embryonic embryonic ADJ JJ Degree=Pos _ _ _ _ 11 stem stem NOUN NN Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 requirement requirement NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 normal normal ADJ JJ Degree=Pos _ _ _ _ 19 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 20 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 8295 # text = Efficient rescue of the defect requires an intact GATA element in the distal promoter, suggesting autoregulatory control of GATA-1 transcription. 1 Efficient efficient ADJ JJ Degree=Pos _ _ _ _ 2 rescue rescue NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 defect defect NOUN NN Number=Sing _ _ _ _ 6 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 intact intact ADJ JJ Degree=Pos _ _ _ _ 9 GATA GATa NOUN NN Number=Sing _ _ _ _ 10 element element NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 distal distal ADJ JJ Degree=Pos _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 17 autoregulatory autoregulatory ADJ JJ Degree=Pos _ _ _ _ 18 control control NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 8296 # text = To examine whether GATA-1 expression involves additional regulatory factors or is maintained entirely by an autoregulatory loop, we have used a transient heterokaryon system to test the ability of erythroid factors to activate the GATA-1 gene in nonerythroid nuclei. 1 To to PART TO _ _ _ _ _ 2 examine examine VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 GATA GATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 involves involf VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 additional additional ADJ JJ Degree=Pos _ _ _ _ 10 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 maintained maintain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 entirely entirely ADV RB _ _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 autoregulatory autoregulatory ADJ JJ Degree=Pos _ _ _ _ 19 loop loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 22 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 transient transient NOUN NN Number=Sing _ _ _ _ 26 heterokaryon heterokaryon NOUN NN Number=Sing _ _ _ _ 27 system system NOUN NN Number=Sing _ _ _ _ 28 to to PART TO _ _ _ _ _ 29 test test VERB VB VerbForm=Inf _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 ability ability NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 34 factors factor NOUN NNS Number=Plur _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 activate activate VERB VB VerbForm=Inf _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 1 1 NUM CD NumType=Card _ _ _ _ 41 gene gene NOUN NN Number=Sing _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 nonerythroid nonerythroid ADJ JJ Degree=Pos _ _ _ _ 44 nuclei nuclei NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 8297 # text = We show here that proerythroblasts and mature erythroid cells contain a diffusible activity (TAG) capable of transcriptional activation of GATA-1 and that this activity decreases during the terminal differentiation of erythroid cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 proerythroblasts proerythroblast NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 mature mature ADJ JJ Degree=Pos _ _ _ _ 8 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 diffusible diffusible ADJ JJ Degree=Pos _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 TAG tag NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 capable capable ADJ JJ Degree=Pos _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ _ 29 decreases decrease NOUN NNS Number=Plur _ _ _ _ 30 during during ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 33 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 8298 # text = Nuclei from GATA-1- mutant embryonic stem cells can still be reprogrammed to express their globin genes in erythroid heterokaryons, indicating that de novo induction of GATA-1 is not required for globin gene activation following cell fusion. 1 Nuclei Nuclei PROPN NNP Number=Sing _ _ _ _ 2 from from ADP IN _ _ _ _ _ 3 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ _ 7 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 8 embryonic embryonic ADJ JJ Degree=Pos _ _ _ _ 9 stem stem NOUN NN Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 can can AUX MD VerbForm=Fin _ _ _ _ 12 still still ADV RB _ _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 reprogrammed reprogram VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 express express VERB VB VerbForm=Inf _ _ _ _ 17 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 globin globin NOUN NN Number=Sing _ _ _ _ 19 genes gene NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 22 heterokaryons heterokaryon NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 de de PROPN NNP Number=Sing _ _ _ _ 27 novo novo NOUN NN Number=Sing _ _ _ _ 28 induction induction NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 not not PART RB _ _ _ _ _ 35 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 for for ADP IN _ _ _ _ _ 37 globin globin ADJ JJ Degree=Pos _ _ _ _ 38 gene gene NOUN NN Number=Sing _ _ _ _ 39 activation activation NOUN NN Number=Sing _ _ _ _ 40 following follow VERB VBG VerbForm=Ger _ _ _ _ 41 cell cell NOUN NN Number=Sing _ _ _ _ 42 fusion fusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8299 # text = Document 0030011398 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011398 0030011398 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8300 # text = Possible role of nuclear factor-kappa B activity in germline C epsilon transcription in a human Burkitt lymphoma B cell line. 1 Possible possible ADJ JJ Degree=Pos _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 germline germline PROPN NNP Number=Sing _ _ _ _ 12 C C PROPN NNP Number=Sing _ _ _ _ 13 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 Burkitt Burkitt PROPN NNP Number=Sing _ _ _ _ 19 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 20 B B NOUN NN Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8301 # text = Nuclear factor-kappa B (NF-kappa B) plays a broad role in gene regulation, but it is not evident whether NF-kappa B acts as a messenger system for germline C epsilon transcription. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 broad broad ADJ JJ Degree=Pos _ _ _ _ 15 role role NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 gene gene ADJ JJ Degree=Pos _ _ _ _ 18 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 not not PART RB _ _ _ _ _ 24 evident evident ADJ JJ Degree=Pos _ _ _ _ 25 whether whether SCONJ IN _ _ _ _ _ 26 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 as as ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 messenger messenger NOUN NN Number=Sing _ _ _ _ 34 system system NOUN NN Number=Sing _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 germline germline NOUN NN Number=Sing _ _ _ _ 37 C c NOUN NN Number=Sing _ _ _ _ 38 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 39 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 8302 # text = We report here that the signaling cascade triggered by interleukin-4 (IL-4) or anti-CD40 monoclonal antibody (mAb) participates in NF-kappa B activation responsible for germline C epsilon transcription in a human Burkitt lymphoma B cell line, DND39. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 signaling signal NOUN NN Number=Sing _ _ _ _ 7 cascade cascade NOUN NN Number=Sing _ _ _ _ 8 triggered trigger VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 4 4 NUM CD NumType=Card _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 anti-CD40 anti-CD40 NUM CD NumType=Card _ _ _ _ 20 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 21 antibody antibody NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 mAb mAb NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 participates participate NOUN NNS Number=Plur _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa PROPN NNP Number=Sing _ _ _ _ 30 B b PROPN NNP Number=Sing _ _ _ _ 31 activation activation NOUN NN Number=Sing _ _ _ _ 32 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 33 for for ADP IN _ _ _ _ _ 34 germline germline PROPN NNP Number=Sing _ _ _ _ 35 C C PROPN NNP Number=Sing _ _ _ _ 36 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 37 transcription transcription NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 human human ADJ JJ Degree=Pos _ _ _ _ 41 Burkitt Burkitt PROPN NNP Number=Sing _ _ _ _ 42 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 43 B b NOUN NN Number=Sing _ _ _ _ 44 cell cell NOUN NN Number=Sing _ _ _ _ 45 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 DND39 DND39 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 8303 # text = Both IL-4 and anti-CD40 mAb induced activation of phosphatidylinositol 3-kinase (PI3-kinase), translocation of a zeta isoform of protein kinase C, and nuclear expression of NF-kappa B. 1 Both both DET DT _ _ _ _ _ 2 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 4 4 NUM CD NumType=Card _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 anti-CD40 anti-CD40 NUM CD NumType=Card _ _ _ _ 7 mAb mAb NOUN NN Number=Sing _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 phosphatidylinositol phosphatidylinositol NOUN NN Number=Sing _ _ _ _ 12 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kinase kinase NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 PI3 PI3 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 translocation translocation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 zeta zeta NOUN NN Number=Sing _ _ _ _ 25 isoform isoform NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 protein protein NOUN NN Number=Sing _ _ _ _ 28 kinase kinase NOUN NN Number=Sing _ _ _ _ 29 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 33 expression expression NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 kappa kappa PROPN NNP Number=Sing _ _ _ _ 38 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 8304 # text = All such events were abrogated by treatment with LY294002, a specific inhibitor of PI3-kinase. 1 All all DET DT _ _ _ _ _ 2 such such ADJ JJ Degree=Pos _ _ _ _ 3 events event NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 abrogated abrogate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 treatment treatment NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 LY Ly PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 294002 294002 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 PI3 PI3 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 -kinase -kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 8305 # text = In addition, N-acetyl-L-cysteine (NAC), a potent antioxidant, decreased NF-kappa B activation caused by IL-4, anti-CD40 mAb, or their combination. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 N-acetyl N-acetyl ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 -L- -L- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 NAC NAC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 potent potent NOUN NN Number=Sing _ _ _ _ 13 antioxidant antioxidant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B b PROPN NNP Number=Sing _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 caused cause VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 anti-CD40 anti-CD40 PROPN NNP Number=Sing _ _ _ _ 28 mAb mAb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 32 combination combination NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 8306 # text = NAC was also effective in diminishing germline C epsilon transcription, and its potency was higher in cultures costimulated with IL-4 and anti-CD40 mAb than in those stimulated with IL-4 alone. 1 NAC NAC PROPN NNP Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 effective effective ADJ JJ Degree=Pos _ _ _ _ 5 in in SCONJ IN _ _ _ _ _ 6 diminishing diminish VERB VBG VerbForm=Ger _ _ _ _ 7 germline germline PROPN NNP Number=Sing _ _ _ _ 8 C C PROPN NNP Number=Sing _ _ _ _ 9 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 14 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 potency potency NOUN NN Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 higher higher ADJ JJR Degree=Cmp _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 cultures culture NOUN NNS Number=Plur _ _ _ _ 20 costimulated costimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 4 4 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 anti-CD40 anti-CD40 NUM CD NumType=Card _ _ _ _ 27 mAb mAb PROPN NNP Number=Sing _ _ _ _ 28 than than ADP IN _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 those those DET DT Number=Plur|PronType=Dem _ _ _ _ 31 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT , _ _ _ _ SpaceAfter=No 35 4 4 X GW _ _ _ _ _ 36 alone alone ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 8307 # text = These results indicate that IL-4 and ligation of CD40 induce NF-kappa B expression via at least a mechanism dependent on the PI3-kinase pathway and suggest that NF-kappa B sensitive to NAC may play a role in regulating germline C epsilon transcription. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 4 4 NUM CD NumType=Card _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 ligation ligation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 CD40 CD40 NUM CD NumType=Card _ _ _ _ 12 induce induce NOUN NN Number=Sing _ _ _ _ 13 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 via via ADP IN _ _ _ _ _ 19 at at ADV RB _ _ _ _ _ 20 least least ADV RBS Degree=Sup _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 23 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 PI3 PI3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 -kinase -kinase NOUN NN Number=Sing _ _ _ _ 28 pathway pathway NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 that that SCONJ IN _ _ _ _ _ 32 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappa kappa NOUN NN Number=Sing _ _ _ _ 35 B b NOUN NN Number=Sing _ _ _ _ 36 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 NAC NAC PROPN NNP Number=Sing _ _ _ _ 39 may may AUX MD VerbForm=Fin _ _ _ _ 40 play play VERB VB VerbForm=Inf _ _ _ _ 41 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 role role NOUN NN Number=Sing _ _ _ _ 43 in in SCONJ IN _ _ _ _ _ 44 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 45 germline germline PROPN NNP Number=Sing _ _ _ _ 46 C C PROPN NNP Number=Sing _ _ _ _ 47 epsilon epsilon ADP IN _ _ _ _ _ 48 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8308 # text = Document 0030011402 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011402 0030011402 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8309 # text = Cross-linking of Fc gamma receptors activates HIV-1 long terminal repeat-driven transcription in human monocytes. 1 Cross cross ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 linking linking NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Fc Fc PROPN NNP Number=Sing _ _ _ _ 6 gamma gamma PROPN NNP Number=Sing _ _ _ _ 7 receptors receptor VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 long long ADJ JJ Degree=Pos _ _ _ _ 13 terminal terminal NOUN NN Number=Sing _ _ _ _ 14 repeat repeat VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 driven driven VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8310 # text = Elevation of the levels of circulating immune complexes frequently accompanies HIV-1 infection and is a prognostic indicator of clinical progression from asymptomatic infection to AIDS. 1 Elevation Elevation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 levels level NOUN NNS Number=Plur _ _ _ _ 5 of of SCONJ IN _ _ _ _ _ 6 circulating circulate VERB VBG VerbForm=Ger _ _ _ _ 7 immune immune PRON NN Number=Sing _ _ _ _ 8 complexes complexe NOUN NNS Number=Plur _ _ _ _ 9 frequently frequently ADV RB _ _ _ _ _ 10 accompanies accompany NOUN NNS Number=Plur _ _ _ _ 11 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 infection infection NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 prognostic prognostic ADJ JJ Degree=Pos _ _ _ _ 19 indicator indicator NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 22 progression progression NOUN NN Number=Sing _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 asymptomatic asymptomatic ADJ JJ Degree=Pos _ _ _ _ 25 infection infection NOUN NN Number=Sing _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 AIDS Aid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 8311 # text = Here we report that cross-linking of Fc gamma RI or Fc gamma RII by adherent human IgG or by specific anti-Fc gamma R mAb activates HIV-1 gene expression in the human monocytic cell line BF24 and increased HIV RNA expression in monocytes from HIV infected patients as assayed by reverse transcription-PCR. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 -linking -link NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Fc Fc PROPN NNP Number=Sing _ _ _ _ 9 gamma gamma PROPN NNP Number=Sing _ _ _ _ 10 RI RI PROPN NNP Number=Sing _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 Fc Fc PROPN NNP Number=Sing _ _ _ _ 13 gamma gamma PROPN NNP Number=Sing _ _ _ _ 14 RII RII PROPN NNP Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 adherent adherent ADJ JJ Degree=Pos _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 IgG Igg NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 specific specific ADJ JJ Degree=Pos _ _ _ _ 22 anti anti X AFX _ _ _ _ SpaceAfter=No 23 -Fc -Fc X GW _ _ _ _ _ 24 gamma gamma X GW _ _ _ _ _ 25 R R X GW _ _ _ _ _ 26 mAb mAb X GW _ _ _ _ _ 27 activates activate X GW _ _ _ _ _ 28 HIV HIV X GW _ _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 human human ADJ JJ Degree=Pos _ _ _ _ 36 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 line line NOUN NN Number=Sing _ _ _ _ 39 BF24 BF24 NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 42 HIV HIV PROPN NNP Number=Sing _ _ _ _ 43 RNA RNA PROPN NNP Number=Sing _ _ _ _ 44 expression expression NOUN NN Number=Sing _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 47 from from ADP IN _ _ _ _ _ 48 HIV haHive PROPN NNP Number=Sing _ _ _ _ 49 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 patients patient NOUN NNS Number=Plur _ _ _ _ 51 as as SCONJ IN _ _ _ _ _ 52 assayed assay VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 53 by by ADP IN _ _ _ _ _ 54 reverse reverse NOUN NN Number=Sing _ _ _ _ 55 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 57 PCR Pcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 8312 # text = In THP-1 cells, Fc gamma R cross-linking induced NF-kappa B, which is known to bind to the regulatory region of the long terminal repeat (LTR) of HIV-1 and to activate HIV-1 transcription. 1 In in ADP IN _ _ _ _ _ 2 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 Fc Fc PROPN NNP Number=Sing _ _ _ _ 8 gamma gamma PROPN NNP Number=Sing _ _ _ _ 9 R R PROPN NNP Number=Sing _ _ _ _ 10 cross cross PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 bind bind VERB VB VerbForm=Inf _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 26 region region NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 long long ADJ JJ Degree=Pos _ _ _ _ 30 terminal terminal NOUN NN Number=Sing _ _ _ _ 31 repeat repeat NOUN NN Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 1 1 NUM CD NumType=Card _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 to to PART TO _ _ _ _ _ 41 activate activate VERB VB VerbForm=Inf _ _ _ _ 42 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 1 1 NUM CD NumType=Card _ _ _ _ 45 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 8313 # text = Anti-TNF-alpha antibody but not anti-IL-1 beta antibody strongly inhibited both the induction of HIV-1-LTR-driven transcription and the induction of NF-kappa B by Fc gamma R cross-linking. 1 Anti-TNF Anti-tnf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 alpha alpha NOUN NN Number=Sing _ _ _ _ 4 antibody antibody NOUN NN Number=Sing _ _ _ _ 5 but but CCONJ CC _ _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 anti-IL anti-il ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 beta beta NOUN NN Number=Sing _ _ _ _ 11 antibody antibody PRON NN Number=Sing _ _ _ _ 12 strongly strongly ADV RB _ _ _ _ _ 13 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 both both CCONJ CC _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 LTR Ltr NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 driven driven VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 induction induction NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappa kappa PROPN NNP Number=Sing _ _ _ _ 33 B b PROPN NNP Number=Sing _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 Fc Fc PROPN NNP Number=Sing _ _ _ _ 36 gamma gamma PROPN NNP Number=Sing _ _ _ _ 37 R R PROPN NNP Number=Sing _ _ _ _ 38 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 -linking -linking NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 8314 # text = These results indicate that Fc gamma R can mediate a TNF-alpha-dependent induction of HIV-1 gene transcription and suggest that immune complexes may contribute to the pathophysiology of HIV-1 infection by augmenting viral replication in monocytes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Fc Fc PROPN NNP Number=Sing _ _ _ _ 6 gamma gamma PROPN NNP Number=Sing _ _ _ _ 7 R be PROPN NNP Number=Sing _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 immune immune ADJ JJ Degree=Pos _ _ _ _ 27 complexes complexe NOUN NNS Number=Plur _ _ _ _ 28 may may AUX MD VerbForm=Fin _ _ _ _ 29 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 pathophysiology pathophysiology NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ _ 37 infection infection NOUN NN Number=Sing _ _ _ _ 38 by by SCONJ IN _ _ _ _ _ 39 augmenting augment VERB VBG VerbForm=Ger _ _ _ _ 40 viral viral ADJ JJ Degree=Pos _ _ _ _ 41 replication replication NOUN NN Number=Sing _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8315 # text = Document 0030011403 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011403 0030011403 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8316 # text = Tobacco smoke induces coordinate activation of HSF and inhibition of NFkappaB in human monocytes: effects on TNFalpha release. 1 Tobacco Tobacco PROPN NNP Number=Sing _ _ _ _ 2 smoke smeak VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 induces induces NOUN NNS Number=Plur _ _ _ _ 4 coordinate coordinate ADJ JJ Degree=Pos _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 HSF Hsf NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NFkappaB Nfkappab PROPN NNP Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 : : PUNCT : _ _ _ _ _ 16 effects effect NOUN NNS Number=Plur _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 19 release release NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8317 # text = Tobacco smoke (TS) exposure is a major risk factor for human disease, and macrophages of healthy smokers have a depressed capacity to release cytokines, including tumor necrosis factor (TNF)alpha. 1 Tobacco Tobacco PROPN NNP Number=Sing _ _ _ _ 2 smoke smoke NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 TS TS NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 exposure exposure NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 major major ADJ JJ Degree=Pos _ _ _ _ 10 risk risk NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 20 smokers smoker NOUN NNS Number=Plur _ _ _ _ 21 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 depressed depressed ADJ JJ Degree=Pos _ _ _ _ 24 capacity capacity NOUN NN Number=Sing _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 release release VERB VB VerbForm=Inf _ _ _ _ 27 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 including include VERB VBG VerbForm=Ger _ _ _ _ 30 tumor tumor NOUN NN Number=Sing _ _ _ _ 31 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 32 factor factor NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 8318 # text = TS induces the synthesis of heat shock (HS)/stress proteins (HSP), and, in particular, of Hsp70. 1 TS T PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 2 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 heat heat NOUN NN Number=Sing _ _ _ _ 7 shock shock NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 HS H PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 stress stress NOUN NN Number=Sing _ _ _ _ 13 proteins protein NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 HSP HSP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 particular particular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 Hsp70 Hsp70 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8319 # text = We determined whether Hsp70 induction by TS was mediated by the activation of the HS transcription factor, HSF. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 determined determine VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 Hsp70 Hsp70 NUM CD NumType=Card _ _ _ _ 5 induction induction NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 TS TS PROPN NNP Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 HS HS PROPN NNP Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 HSF HSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 8320 # text = HSF activation has been shown to inhibit NFkappaB. 1 HSF Hsf NOUN NN Number=Sing _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 8 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 8321 # text = Thus, we also determined the effects of TS on NFkappaB. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 determined determine VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 effects effect NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 TS TS PROPN NNP Number=Sing _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 8322 # text = U937 cells and human peripheral blood monocytes were exposed to TS, binding activities of the respective transcription factors were analyzed, and Hsp70 expression and TNFalpha release were determined in parallel. 1 U937 U937 NUM CD NumType=Card _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 6 blood blood NOUN NN Number=Sing _ _ _ _ 7 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 exposed expose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 TS TS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 activities activity NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 respective respective ADJ JJ Degree=Pos _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factors factor NOUN NNS Number=Plur _ _ _ _ 20 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 Hsp70 Hsp70 NUM CD NumType=Card _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 28 release release NOUN NN Number=Sing _ _ _ _ 29 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 parallel parallel NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 8323 # text = TS activated HSF, which was associated with Hsp70 overexpression and inhibition of NFkappaB binding activity and TNFalpha release. 1 TS TS PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 2 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 HSF HSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 which which PRON WDT PronType=Rel _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 Hsp70 Hsp70 NUM CD NumType=Card _ _ _ _ 10 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 15 binding bind VERB VBG VerbForm=Ger _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 19 release release NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 8324 # text = The altered cytokine profile observed in smokers may relate to an HSF/Hsp70-mediated inhibition of NFkappaB activity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 altered alter VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 4 profile profile NOUN NN Number=Sing _ _ _ _ 5 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 smokers smoker NOUN NNS Number=Plur _ _ _ _ 8 may may AUX MD VerbForm=Fin _ _ _ _ 9 relate relate VERB VB VerbForm=Inf _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 HSF HSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 / / PUNCT , _ _ _ _ SpaceAfter=No 14 Hsp70 Hsp70 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 -mediated -mediated VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NFkappaB NFkappaB ADJ JJ Degree=Pos _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 8325 # text = Copyright 1998 Academic Press. 1 Copyright copyright NOUN NN Number=Sing _ _ _ _ 2 1998 1998 NUM CD NumType=Card _ _ _ _ 3 Academic academic PROPN NNP Number=Sing _ _ _ _ 4 Press Press PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8326 # text = Document 0030011405 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011405 0030011405 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8327 # text = Adherence-dependent increase in human monocyte PDGF(B) mRNA is associated with increases in c-fos, c-jun, and EGR2 mRNA. 1 Adherence Adherence ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 4 increase increase NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 8 PDGF PDGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 increases increase NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 c- c- SYM NFP _ _ _ _ SpaceAfter=No 19 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 c- c- SYM NFP _ _ _ _ SpaceAfter=No 22 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 EGR2 EGR2 NUM CD NumType=Card _ _ _ _ 26 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8328 # text = Adherence is an important initial step in the transition of a circulating monocyte to a tissue macrophage. 1 Adherence Adherence NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 important important ADJ JJ Degree=Pos _ _ _ _ 5 initial initial ADJ JJ Degree=Pos _ _ _ _ 6 step step NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transition transition NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 circulating circulate VERB VBG VerbForm=Ger _ _ _ _ 13 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 tissue tissue NOUN NN Number=Sing _ _ _ _ 17 macrophage macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 8329 # text = This differentiation is accompanied by an augmented capacity to generate growth factors. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 augmented augment VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 capacity capacity NOUN NN Number=Sing _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 generate generate VERB VB VerbForm=Inf _ _ _ _ 11 growth growth NOUN NN Number=Sing _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 8330 # text = We hypothesized that adherence itself might be an important trigger for a sequence of gene activation culminating in cells with increased mRNA encoding profibrotic growth factors such as platelet-derived growth factor B subunit (PDGF[B]) and transforming growth factor-beta (TGF-beta). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 hypothesized hypothesize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 adherence adherence NOUN NN Number=Sing _ _ _ _ 5 itself itself PRON PRP Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 6 might might AUX MD VerbForm=Fin _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 important important ADJ JJ Degree=Pos _ _ _ _ 10 trigger trigger NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 sequence sequence NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 culminating culminat VERB VBG VerbForm=Ger _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 23 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 24 profibrotic profibrotic ADJ JJ Degree=Pos _ _ _ _ 25 growth growth NOUN NN Number=Sing _ _ _ _ 26 factors factor NOUN NNS Number=Plur _ _ _ _ 27 such such ADJ JJ Degree=Pos _ _ _ _ 28 as as ADP IN _ _ _ _ _ 29 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 growth growth NOUN NN Number=Sing _ _ _ _ 33 factor factor NOUN NN Number=Sing _ _ _ _ 34 B b NOUN NN Number=Sing _ _ _ _ 35 subunit subunit NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 PDGF PDGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 transforming transform VERB VBG VerbForm=Ger _ _ _ _ 44 growth growth NOUN NN Number=Sing _ _ _ _ 45 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 -beta -beta NOUN NN Number=Sing _ _ _ _ 47 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 48 TGF Tgf NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 8331 # text = After in vitro adherence, human monocytes had a biphasic increase in PDGF(B) mRNA with peaks at 6 h and 13 d. 1 After after ADP IN _ _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 vitro vitro NOUN NN Number=Sing _ _ _ _ 4 adherence adherence NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 8 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 biphasic biphasic ADJ JJ Degree=Pos _ _ _ _ 11 increase increase NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 PDGF PDGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 peaks peak NOUN NNS Number=Plur _ _ _ _ 20 at at ADP IN _ _ _ _ _ 21 6 6 NUM CD NumType=Card _ _ _ _ 22 h h NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 13 13 NUM CD NumType=Card _ _ _ _ 25 d would NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 8332 # text = No increase in TGF-beta mRNA was observed. 1 No no DET DT _ _ _ _ _ 2 increase increase NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 beta beta PROPN NNP Number=Sing _ _ _ _ 7 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 observed observed ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 8333 # text = The 6-h increase in PDGF(B) mRNA was adherence dependent, and in addition, was abrogated when the cytoskeletal integrity was compromised by cytochalasin D. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 h h NOUN NN Number=Sing _ _ _ _ 5 increase increase NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 PDGF PDGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 adherence adherence NOUN NN Number=Sing _ _ _ _ 14 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 abrogated abrogate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 when when ADV WRB PronType=Int _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 cytoskeletal cytoskeletal ADJ JJ Degree=Pos _ _ _ _ 25 integrity integrity NOUN NN Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 compromised compromise VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 cytochalasin cytochalasin PROPN NNP Number=Sing _ _ _ _ 30 D d PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 8334 # text = The 6-h increase in PDGF(B) mRNA was unaltered by adherence in the presence of the monocyte stimulus lipopolysaccharide. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 h h NOUN NN Number=Sing _ _ _ _ 5 increase increase NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 PDGF PDGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 unaltered unalter VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 adherence adherence NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 presence presence NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 22 stimulus stimulus NOUN NN Number=Sing _ _ _ _ 23 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 8335 # text = Adherence to either fibronectin or collagen-coated plastic had little consistent effect on PDGF(B) mRNA accumulation. 1 Adherence Adherence VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 to to PART TO _ _ _ _ _ 3 either either CCONJ CC _ _ _ _ _ 4 fibronectin fibronectin VERB VB VerbForm=Inf _ _ _ _ 5 or or CCONJ CC _ _ _ _ _ 6 collagen collagen VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 coated coate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 plastic plastic NOUN NN Number=Sing _ _ _ _ 10 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 little little ADJ JJ Degree=Pos _ _ _ _ 12 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 13 effect effect NOUN NN Number=Sing _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 PDGF PDGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 mRNA mRNa DET DT Definite=Ind|PronType=Art _ _ _ _ 20 accumulation accumulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 8336 # text = The increased PDGF(B) mRNA observed in adherent monocytes was accompanied by increases in mRNAs of the early growth response genes c-fos (maximal at 20 min), c-jun, and EGR2 (maximal at 6-24 h). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 PDGF Pdgf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 8 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 adherent adherent ADJ JJ Degree=Pos _ _ _ _ 11 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 increases increase NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 mRNAs mRNA NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 early early ADJ JJ Degree=Pos _ _ _ _ 21 growth growth NOUN NN Number=Sing _ _ _ _ 22 response response NOUN NN Number=Sing _ _ _ _ 23 genes gene NOUN NNS Number=Plur _ _ _ _ 24 c- c- PUNCT : _ _ _ _ SpaceAfter=No 25 fos fo NOUN NNS Number=Plur _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 28 at at ADP IN _ _ _ _ _ 29 20 20 NUM CD NumType=Card _ _ _ _ 30 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 c- c- SYM NFP _ _ _ _ SpaceAfter=No 34 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 EGR2 Egr2 NOUN NN Number=Sing _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 40 at at ADP IN _ _ _ _ _ 41 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 - - SYM SYM _ _ _ _ SpaceAfter=No 43 24 24 NUM CD NumType=Card _ _ _ _ 44 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 8337 # text = The increase in c-jun and EGR2, but not c-fos, mRNA was also abrogated by cytochalasin D. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 increase increase NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 c- c- SYM NFP _ _ _ _ SpaceAfter=No 5 jun jun NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 EGR2 Egr2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 not not ADV RB _ _ _ _ _ 11 c- c- PUNCT : _ _ _ _ SpaceAfter=No 12 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 also also ADV RB _ _ _ _ _ 17 abrogated abrogate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 cytochalasin cytochalasin PROPN NNP Number=Sing _ _ _ _ 20 D d PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 8338 # text = These observations suggest that adherence results in increases of c-fos, c-jun, EGR2, and PDGF(B) mRNA. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 adherence adherence NOUN NN Number=Sing _ _ _ _ 6 results result NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 increases increase NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 c- c- SYM NFP _ _ _ _ SpaceAfter=No 15 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 EGR2 Egr2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 PDGF Pdgf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 mRNA mRNa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8339 # text = In addition, the increases in c-jun, EGR2, and PDGF(B) may depend on cytoskeletal rearrangement. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 increases increase NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 c- c- SYM NFP _ _ _ _ SpaceAfter=No 8 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 EGR2 Egr2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 PDGF PDGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 may may AUX MD VerbForm=Fin _ _ _ _ 18 depend depend VERB VB VerbForm=Inf _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 cytoskeletal cytoskeletal ADJ JJ Degree=Pos _ _ _ _ 21 rearrangement rearrangement NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 8340 # text = Modulation of these events at the time of adherence offers a mechanism by which differential priming of the cells may be accomplished. 1 Modulation Modulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 events event NOUN NNS Number=Plur _ _ _ _ 5 at at ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 time time NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 adherence adherence NOUN NN Number=Sing _ _ _ _ 10 offers offer VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 differential differential ADJ JJ Degree=Pos _ _ _ _ 16 priming priming NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 may may AUX MD VerbForm=Fin _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 accomplished accomplish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8341 # text = Document 0030011412 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011412 0030011412 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8342 # text = NF-kappaB-mediated up-regulation of Bcl-x and Bfl-1/A1 is required for CD40 survival signaling in B lymphocytes. 1 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 kappaB- kappaB- SYM NFP _ _ _ _ SpaceAfter=No 4 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 up up ADP RP _ _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 regulation regulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 x x PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 Bfl Bfl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 -1/A1 -1/A1 PROPN NNP Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 CD40 CD40 NUM CD NumType=Card _ _ _ _ 19 survival survival NOUN NN Number=Sing _ _ _ _ 20 signaling signaling VERB VBG VerbForm=Ger _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 B b ADJ JJ Degree=Pos _ _ _ _ 23 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8343 # text = Activation of CD40 is essential for thymus-dependent humoral immune responses and rescuing B cells from apoptosis. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 essential essential ADJ JJ Degree=Pos _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 thymus thymus ADV RB _ _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 10 humoral humoral ADJ JJ Degree=Pos _ _ _ _ 11 immune immune ADJ JJ Degree=Pos _ _ _ _ 12 responses response NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 rescuing rescue VERB VBG VerbForm=Ger _ _ _ _ 15 B b ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 8344 # text = Many of the effects of CD40 are believed to be achieved through altered gene expression. 1 Many many ADJ JJ Degree=Pos _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effects effect NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 CD40 CD40 NOUN NN Number=Sing _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 believed believe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 achieved achieve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 through through ADP IN _ _ _ _ _ 13 altered alter VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 8345 # text = In addition to Bcl-x, a known CD40-regulated antiapoptotic molecule, we identified a related antiapoptotic molecule, A1/Bfl-1, as a CD40-inducible gene. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 x x SYM SYM _ _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 antiapoptotic antiapoptotic ADJ JJ Degree=Pos _ _ _ _ 14 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 17 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 related related ADJ JJ Degree=Pos _ _ _ _ 20 antiapoptotic antiapoptotic ADJ JJ Degree=Pos _ _ _ _ 21 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 A1/ A1ith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 24 Bfl Bfl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 as as ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 32 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 8346 # text = Inhibition of the NF-kappaB pathway by overexpression of a dominant-active inhibitor of NF-kappaB abolished CD40-induced up-regulation of both the Bfl-1 and Bcl-x genes and also eliminated the ability of CD40 to rescue Fas-induced cell death. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 pathway pathway NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 dominant dominant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 active active ADJ JJ Degree=Pos _ _ _ _ 15 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 20 abolished abolish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 -induced -induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 up up ADP IN _ _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 regulation regulation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 both both CCONJ CC _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 Bfl Bfl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 -1 -1 NUM CD NumType=Card _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 Bcl Bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 x x NOUN NN Number=Sing _ _ _ _ 35 genes gene NOUN NNS Number=Plur _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 also also ADV RB _ _ _ _ _ 38 eliminated eliminate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 ability ability NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 43 to to PART TO _ _ _ _ _ 44 rescue rescue VERB VB VerbForm=Inf _ _ _ _ 45 Fas Fas NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 48 cell cell NOUN NN Number=Sing _ _ _ _ 49 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 8347 # text = Within the upstream promoter region of Bcl-x, a potential NF-kappaB-binding sequence was found to support NF-kappaB-dependent transcriptional activation. 1 Within within ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 4 promoter promoter NOUN NN Number=Sing _ _ _ _ 5 region region NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 x x NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 potential potential ADJ JJ Degree=Pos _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 binding binding VERB VBG VerbForm=Ger _ _ _ _ 18 sequence sequence NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 support support VERB VB VerbForm=Inf _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 28 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 8348 # text = Furthermore, expression of physiological levels of Bcl-x protected B cells from Fas-mediated apoptosis in the absence of NF-kappaB signaling. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 physiological physiological ADJ JJ Degree=Pos _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 x x SYM SYM _ _ _ _ _ 11 protected protect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 B b ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 Fas- Fas- SYM SYM _ _ _ _ SpaceAfter=No 16 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 absence absence NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 25 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 8349 # text = Thus, our results suggest that CD40-mediated cell survival proceeds through NF-kappaB-dependent up-regulation of Bcl-2 family members. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 survival survival NOUN NN Number=Sing _ _ _ _ 12 proceeds proceed NOUN NNS Number=Plur _ _ _ _ 13 through through ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 19 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 regulation regulation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ _ 26 family family NOUN NN Number=Sing _ _ _ _ 27 members member NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8350 # text = Document 0030011413 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011413 0030011413 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8351 # text = Regulation of low shear flow-induced HAEC VCAM-1 expression and monocyte adhesion. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 low low ADJ JJ Degree=Pos _ _ _ _ 4 shear shear NOUN NN Number=Sing _ _ _ _ 5 flow flow NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 HAEC Haec PROPN NNP Number=Sing _ _ _ _ 9 VCAM VCAm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 15 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8352 # text = We recently reported that prolonged exposure of human aortic endothelial cells (HAEC) to low shear stress flow patterns is associated with a sustained increase in the activated form of the transcriptional regulator nuclear factor-kappaB (NF-kappaB). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 recently recently ADV RB _ _ _ _ _ 3 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 prolonged prolonge ADJ JJ Degree=Pos _ _ _ _ 6 exposure exposure NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 aortic aortic ADJ JJ Degree=Pos _ _ _ _ 10 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 HAEC HAEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 low low ADJ JJ Degree=Pos _ _ _ _ 17 shear shear NOUN NN Number=Sing _ _ _ _ 18 stress stress NOUN NN Number=Sing _ _ _ _ 19 flow flow NOUN NN Number=Sing _ _ _ _ 20 patterns pattern NOUN NNS Number=Plur _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 sustained sustain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 increase increase NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 form form NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 34 regulator regulator NOUN NN Number=Sing _ _ _ _ 35 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 36 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 -kappaB -kappaB PROPN NNP Number=Sing _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 8353 # text = Here we investigate the hypothesis that low shear-induced activation of NF-kappaB is responsible for enhanced expression of vascular cell adhesion molecule (VCAM-1) resulting in augmented endothelial cell-monocyte (EC-Mn) adhesion and that this activation is dependent on intracellular oxidant activity. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 investigate investigate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 low low ADJ JJ Degree=Pos _ _ _ _ 8 shear shear NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 25 molecule molecule NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 resulting result VERB VBG VerbForm=Ger _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 augmented augment ADJ JJ Degree=Pos _ _ _ _ 34 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 Mn Mn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 that that SCONJ IN _ _ _ _ _ 46 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 47 activation activation NOUN NN Number=Sing _ _ _ _ 48 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 49 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 50 on on ADP IN _ _ _ _ _ 51 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 52 oxidant oxidant ADJ JJ Degree=Pos _ _ _ _ 53 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 8354 # text = Before exposure to low shear (2 dyn/cm2) for 6 h, HAEC were preincubated with or without the antioxidants pyrrolidine dithiocarbamate (PDTC) or N-acetyl-L-cysteine (NAC). 1 Before before ADP IN _ _ _ _ _ 2 exposure exposure NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 low low ADJ JJ Degree=Pos _ _ _ _ 5 shear shear NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 dyn/ dyn/ SYM SYM _ _ _ _ SpaceAfter=No 9 cm2 cm2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 6 6 NUM CD NumType=Card _ _ _ _ 13 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 HAEC Haec NOUN NN Number=Sing _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 preincubated preincubate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 without without ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ _ 23 pyrrolidine pyrrolidine PRON PRP _ _ _ _ _ 24 dithiocarbamate dithiocarbamate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 PDTC PDTC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 N- N- SYM NFP _ _ _ _ SpaceAfter=No 30 acetyl acetyl ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 31 -L- -l- NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 NAC NAC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 8355 # text = PDTC strongly inhibited low shear-induced activation of NF-kappaB, expression of VCAM-1, and EC-Mn adhesion. 1 PDTC Pdtc PROPN NNP Number=Sing _ _ _ _ 2 strongly strongly ADV RB _ _ _ _ _ 3 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 low low ADJ JJ Degree=Pos _ _ _ _ 5 shear shear NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 Mn Mn PROPN NNP Number=Sing _ _ _ _ 24 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8356 # text = Paradoxically, NAC exerted a positive effect on low shear-induced VCAM-1 expression and EC-Mn adhesion and only slightly downregulated NF-kappaB activation. 1 Paradoxically paradoxically ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 NAC NAC PROPN NNP Number=Sing _ _ _ _ 4 exerted exert VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 positive positive ADJ JJ Degree=Pos _ _ _ _ 7 effect effect NOUN NN Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 low low ADJ JJ Degree=Pos _ _ _ _ 10 shear shear NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 Mn Mn PROPN NNP Number=Sing _ _ _ _ 21 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 only only ADV RB _ _ _ _ _ 24 slightly slightly ADV RB _ _ _ _ _ 25 downregulated downregulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 8357 # text = However, cytokine-induced NF-kappaB activation and VCAM-1 expression are blocked by both PDTC and NAC. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 cytokine cytokine VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 both both CCONJ CC _ _ _ _ _ 19 PDTC PDTC PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 NAC NAC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 8358 # text = These data suggest that NF-kappaB plays a key role in low shear-induced VCAM-1 expression and that pathways mediating low shear- and cytokine-induced EC-Mn adhesion may be differentially regulated. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 key key ADJ JJ Degree=Pos _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 low low ADJ JJ Degree=Pos _ _ _ _ 14 shear shear NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 that that SCONJ IN _ _ _ _ _ 23 pathways pathway NOUN NNS Number=Plur _ _ _ _ 24 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 25 low low ADJ JJ Degree=Pos _ _ _ _ 26 shear shear NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 Mn Mn PROPN NNP Number=Sing _ _ _ _ 35 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 36 may may AUX MD VerbForm=Fin _ _ _ _ 37 be be AUX VB VerbForm=Inf _ _ _ _ 38 differentially differentially ADV RB _ _ _ _ _ 39 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8359 # text = Document 0030011414 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011414 0030011414 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8360 # text = The small GTP-binding protein Rho potentiates AP-1 transcription in T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 small small ADJ JJ Degree=Pos _ _ _ _ 3 GTP- Gtp- NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 Rho Rho PROPN NNP Number=Sing _ _ _ _ 7 potentiates potentiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8361 # text = The Rho family of small GTP-binding proteins is involved in the regulation of cytoskeletal structure, gene transcription, specific cell fate development, and transformation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Rho Rho PROPN NNP Number=Sing _ _ _ _ 3 family family NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 small small ADJ JJ Degree=Pos _ _ _ _ 6 GTP- Gtp- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 binding binding VERB VBG VerbForm=Ger _ _ _ _ 8 proteins protein NOUN NNS Number=Plur _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 involved involved ADJ JJ Degree=Pos _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 regulation regulation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 cytoskeletal cytoskeletal ADJ JJ Degree=Pos _ _ _ _ 16 structure structure NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 specific specific ADJ JJ Degree=Pos _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 fate fate NOUN NN Number=Sing _ _ _ _ 24 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 transformation transformation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 8362 # text = We demonstrate in this report that overexpression of an activated form of Rho enhances AP-1 activity in Jurkat T cells in the presence of phorbol myristate acetate (PMA), but activated Rho (V14Rho) has little or no effect on NFAT, Oct-1, and NF-kappaB enhancer element activities under similar conditions. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 report report NOUN NN Number=Sing _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 form form NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Rho Rho PROPN NNP Number=Sing _ _ _ _ 14 enhances enhance NOUN NNS Number=Plur _ _ _ _ 15 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 presence presence NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 28 myristate myristate NOUN NN Number=Sing _ _ _ _ 29 acetate acetate NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 but but CCONJ CC _ _ _ _ _ 35 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 Rho Rho PROPN NNP Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 V14 V14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 Rho Rho PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 42 little little ADJ JJ Degree=Pos _ _ _ _ 43 or or CCONJ CC _ _ _ _ _ 44 no no DET DT _ _ _ _ _ 45 effect effect NOUN NN Number=Sing _ _ _ _ 46 on on ADP IN _ _ _ _ _ 47 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 51 , , PUNCT , _ _ _ _ _ 52 and and CCONJ CC _ _ _ _ _ 53 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 kappaB kappab PROPN NNP Number=Sing _ _ _ _ 56 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 57 element element NOUN NN Number=Sing _ _ _ _ 58 activities activity NOUN NNS Number=Plur _ _ _ _ 59 under under ADP IN _ _ _ _ _ 60 similar similar ADJ JJ Degree=Pos _ _ _ _ 61 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 62 . . PUNCT . _ _ _ _ _ # sent_id = 8363 # text = Overexpression of a V14Rho construct incapable of membrane localization (CAAX deleted) abolishes PMA-induced AP-1 transcriptional activation. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 V14 V14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 Rho Rho PROPN NNP Number=Sing _ _ _ _ 6 construct construct VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 incapable incapable ADJ JJ Degree=Pos _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 membrane membrane NOUN NN Number=Sing _ _ _ _ 10 localization localization NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 CAAX CAAX NOUN NN Number=Sing _ _ _ _ 13 deleted delete VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 abolishes abolish VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 8364 # text = The effect of Rho on AP-1 is independent of the mitogen-activated protein kinase pathway, as a dominant-negative MEK and a MEK inhibitor (PD98059) did not affect Rho-induced AP-1 activity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Rho Rho PROPN NNP Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 AP Ap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 independent independent ADJ JJ Degree=Pos _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 kinase kinase NOUN NN Number=Sing _ _ _ _ 18 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 dominant dominant NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 negative negative ADJ JJ Degree=Pos _ _ _ _ 25 MEK Mek PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 MEK Mek PROPN NNP Number=Sing _ _ _ _ 29 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 PD98059 PD98059 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 not not PART RB _ _ _ _ _ 35 affect affect VERB VB VerbForm=Inf _ _ _ _ 36 Rho Rho PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 1 1 NUM CD NumType=Card _ _ _ _ 42 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 8365 # text = V14Rho binds strongly to protein kinase Calpha (PKCalpha) in vivo; however, deletion of the CAAX site on V14Rho severely diminished this association. 1 V14 V14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 Rho Rho PROPN NNP Number=Sing _ _ _ _ 3 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 strongly strongly ADV RB _ _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 protein protein VERB VB VerbForm=Inf _ _ _ _ 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 Calpha Calpha PROPN NNP Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 PKCalpha PKCalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ; ; PUNCT , _ _ _ _ _ 15 however however ADV RB _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 deletion deletion NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 CAAX CAAX PROPN NNP Number=Sing _ _ _ _ 21 site site NOUN NN Number=Sing _ _ _ _ 22 on on ADP IN _ _ _ _ _ 23 V14 V14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 Rho Rho PROPN NNP Number=Sing _ _ _ _ 25 severely severely ADV RB _ _ _ _ _ 26 diminished diminish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 association association NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 8366 # text = Evidence for a role for PKCalpha as an effector of Rho was obtained by the observation that coexpression of the N-terminal domain of PKCalpha blocked the effects of activated Rho plus PMA on AP-1 transcriptional activity. 1 Evidence evidence NOUN NN Number=Sing _ _ _ _ 2 for for ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 PKCalpha PKCalpha PROPN NNP Number=Sing _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 effector effector NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 Rho Rho PROPN NNP Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 obtained obtain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 observation observation NOUN NN Number=Sing _ _ _ _ 17 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 18 coexpression coexpression NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 N- N- SYM SYM _ _ _ _ SpaceAfter=No 22 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 23 domain domain NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 PKCalpha PKCalpha PROPN NNP Number=Sing _ _ _ _ 26 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 effects effect NOUN NNS Number=Plur _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 Rho Rho PROPN NNP Number=Sing _ _ _ _ 32 plus plus CCONJ CC _ _ _ _ _ 33 PMA PMA PROPN NNP Number=Sing _ _ _ _ 34 on on ADP IN _ _ _ _ _ 35 AP Ap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT , _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ _ 38 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 39 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 8367 # text = These data suggest that Rho potentiates AP-1 transcription during T-cell activation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Rho Rho PRON WP PronType=Int _ _ _ _ 6 potentiates potentiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 during during ADP IN _ _ _ _ _ 12 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8368 # text = Document 0030011420 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011420 0030011420 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8369 # text = Fibrinogen activates NF-kappa B transcription factors in mononuclear phagocytes. 1 Fibrinogen Fibrinogen PROPN NNP Number=Sing _ _ _ _ 2 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 11 phagocytes phagocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8370 # text = Adhesion to extracellular matrices is known to modulate leukocyte activation, although the mechanisms are not fully understood. 1 Adhesion Adhesion NOUN NN Number=Sing _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 4 matrices matrice NOUN NNS Number=Plur _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 9 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 although although SCONJ IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 fully fully ADV RB _ _ _ _ _ 18 understood understand VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 8371 # text = Mononuclear phagocytes are exposed to fibrinous provisional matrix throughout migration into inflammatory foci, so this study was undertaken to determine whether fibrinogen triggers activation of NF-kappa B transcription factors. 1 Mononuclear Mononuclear ADJ JJ Degree=Pos _ _ _ _ 2 phagocytes phagocyte NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 exposed expose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 fibrinous fibrinous VERB VB VerbForm=Inf _ _ _ _ 7 provisional provisional ADJ JJ Degree=Pos _ _ _ _ 8 matrix matrix NOUN NN Number=Sing _ _ _ _ 9 throughout throughout ADP IN _ _ _ _ _ 10 migration migration NOUN NN Number=Sing _ _ _ _ 11 into into ADP IN _ _ _ _ _ 12 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 13 foci foci NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 so so ADV RB _ _ _ _ _ 16 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 17 study study NOUN NN Number=Sing _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 undertaken undertake ADJ JJ Degree=Pos _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 determine determine VERB VB VerbForm=Inf _ _ _ _ 22 whether whether SCONJ IN _ _ _ _ _ 23 fibrinogen fibrinogen NOUN NN Number=Sing _ _ _ _ 24 triggers trigger NOUN NNS Number=Plur _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ _ 32 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 8372 # text = U937 cells differentiated with PMA in nonadherent culture were shown to express two fibrinogen-binding integrins, predominately CD11b/CD18, and to a lesser extent, CD11c/CD18. Cells stimulated with fibrinogen (10-100 microg/ml)/Mn2+ (50 microM) for 2 h were examined by electrophoretic mobility shift assay. 1 U937 U937 NUM CD NumType=Card _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 PMA Pma PROPN NNP Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 nonadherent nonadherent ADJ JJ Degree=Pos _ _ _ _ 8 culture culture NOUN NN Number=Sing _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 express express VERB VB VerbForm=Inf _ _ _ _ 13 two two NUM CD NumType=Card _ _ _ _ 14 fibrinogen fibrinogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 integrins integrin NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 predominately predominately ADV RB _ _ _ _ _ 20 CD11b/CD18 CD11b/CD18 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 lesser lesser ADJ JJR Degree=Cmp _ _ _ _ 26 extent extent NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 CD11c/CD18 CD11c/CD18 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ 30 Cells cells PROPN NNPS Number=Plur _ _ _ _ 31 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 fibrinogen fibrinogen NOUN NN Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 - - SYM SYM _ _ _ _ SpaceAfter=No 37 100 100 NUM CD NumType=Card _ _ _ _ 38 microg/ml)/Mn2+ microg/ml)/mn2+ NOUN NN Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 50 50 NUM CD NumType=Card _ _ _ _ 41 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 for for ADP IN _ _ _ _ _ 44 2 2 NUM CD NumType=Card _ _ _ _ 45 h h NOUN NN Number=Sing _ _ _ _ 46 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 47 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 48 by by ADP IN _ _ _ _ _ 49 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 50 mobility mobility NOUN NN Number=Sing _ _ _ _ 51 shift shift NOUN NN Number=Sing _ _ _ _ 52 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 8373 # text = NF-kappa B activation, minimal in unstimulated cells, was substantially up-regulated by fibrinogen. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 substantially substantially ADV RB _ _ _ _ _ 14 up up ADV RB _ _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 fibrinogen fibrinogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 8374 # text = Fibrinogen also caused activation of AP-1, but not SP1 or cAMP response element-binding protein (CREB) factors. 1 Fibrinogen Fibrinogen PROPN NNP Number=Sing _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 but but CCONJ CC _ _ _ _ _ 11 not not ADV RB _ _ _ _ _ 12 SP1 SP1 NUM CD NumType=Card _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 cAMP camp NOUN NN Number=Sing _ _ _ _ 15 response response NOUN NN Number=Sing _ _ _ _ 16 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 CREB CREB NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 8375 # text = Blocking mAbs against CD18 and CD11b abrogated fibrinogen-induced NF-kappa B activation. 1 Blocking Blocke VERB VBG VerbForm=Ger _ _ _ _ 2 mAbs mAb NOUN NNS Number=Plur _ _ _ _ 3 against against ADP IN _ _ _ _ _ 4 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 18 18 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 CD11 CD11 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 b b NOUN NN Number=Sing _ _ _ _ 9 abrogated abrogate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 fibrinogen fibrinogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 8376 # text = To determine the effects on transcriptional regulation, U937 cells were transfected with a plasmid containing the HIV-1 enhancer (bearing two NF-kappa B sites) coupled to a chloramphenicol acetyltransferase (CAT) reporter. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effects effect NOUN NNS Number=Plur _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 U937 U937 NUM CD NumType=Card _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 transfected transfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 16 containing contain VERB VBG VerbForm=Ger _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 bearing bear VERB VBG VerbForm=Ger _ _ _ _ 24 two two NUM CD NumType=Card _ _ _ _ 25 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ _ 29 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 coupled couple VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 35 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 CAT cat NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 reporter reporter NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 8377 # text = Cells were subsequently stimulated with 1) PMA for 24 h, inducing CAT activity by 2.6-fold, 2) fibrinogen/Mn2+ for 2 h, inducing CAT activity by 3.2-fold, or 3) costimulation with fibrinogen and PMA, inducing 5.7-fold the CAT activity induced by PMA alone. 1 Cells cell NOUN NNS Number=Plur _ _ _ _ 2 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 subsequently subsequently ADV RB _ _ _ _ _ 4 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 PMA Pma NOUN NN Number=Sing _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 24 24 NUM CD NumType=Card _ _ _ _ 11 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 14 CAT cat ADJ JJ Degree=Pos _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 2.6 2.6 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 fibrinogen fibrinogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 / / PUNCT , _ _ _ _ SpaceAfter=No 25 Mn2 Mn2 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 + + SYM SYM _ _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 2 2 NUM CD NumType=Card _ _ _ _ 29 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 32 CAT cat ADJ JJ Degree=Pos _ _ _ _ 33 activity activity NOUN NN Number=Sing _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 3.2 3.2 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 or or CCONJ CC _ _ _ _ _ 40 3 3 X LS _ _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 43 with with ADP IN _ _ _ _ _ 44 fibrinogen fibrinogen NOUN NN Number=Sing _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 PMA Pma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 49 5.7 5.7 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 - - PUNCT , _ _ _ _ SpaceAfter=No 51 fold fold VERB VB VerbForm=Inf _ _ _ _ 52 the the DET DT Definite=Def|PronType=Art _ _ _ _ 53 CAT cat PROPN NNP Number=Sing _ _ _ _ 54 activity activity NOUN NN Number=Sing _ _ _ _ 55 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 56 by by ADP IN _ _ _ _ _ 57 PMA PMA PROPN NNP Number=Sing _ _ _ _ 58 alone alone ADV RB _ _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 8378 # text = We conclude that contact with fibrinogen-derived proteins may contribute to mononuclear phagocyte activation by signaling through CD11b/CD18, resulting in selective activation of transcriptional regulatory factors, including NF-kappa B. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 contact contact NOUN NN Number=Sing _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 fibrinogen fibrinogen NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 may may AUX MD VerbForm=Fin _ _ _ _ 11 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 mononuclear mononuclear VERB VB VerbForm=Inf _ _ _ _ 14 phagocyte phagocyte NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 by by SCONJ IN _ _ _ _ _ 17 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 18 through through ADP IN _ _ _ _ _ 19 CD11b/CD18 CD11b/CD18 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 resulting result VERB VBG VerbForm=Ger _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 selective selective ADJ JJ Degree=Pos _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 27 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 28 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 including include VERB VBG VerbForm=Ger _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappa kappa PROPN NNP Number=Sing _ _ _ _ 34 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8379 # text = Document 0030011421 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011421 0030011421 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8380 # text = Alteration of a single serine in the basic domain of the Epstein-Barr virus ZEBRA protein separates its functions of transcriptional activation and disruption of latency. 1 Alteration Alteration NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 single single ADJ JJ Degree=Pos _ _ _ _ 5 serine serine NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 basic basic ADJ JJ Degree=Pos _ _ _ _ 9 domain domain NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 Barr Barr PROPN NNP Number=Sing _ _ _ _ 15 virus virus NOUN NN Number=Sing _ _ _ _ 16 ZEBRA zebra PROPN NNP Number=Sing _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 separates separate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 functions function NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 disruption disruption NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 latency latency NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8381 # text = The ZEBRA protein from Epstein-Barr virus (EBV) activates a switch from the latent to the lytic expression program of the virus. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ZEBRA zebra PROPN NNP Number=Sing _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 Barr Barr PROPN NNP Number=Sing _ _ _ _ 8 virus virus NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 switch switch NOUN NN Number=Sing _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 latent latent NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 program program NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 8382 # text = ZEBRA, a member of the bZIP family of DNA-binding proteins, is a transcriptional activator capable of inducing expression from viral lytic cycle promoters. 1 ZEBRA zebra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 member member NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 bZIP bZIP PROPN NNP Number=Sing _ _ _ _ 8 family family NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 activator activator NOUN NN Number=Sing _ _ _ _ 19 capable capable ADJ JJ Degree=Pos _ _ _ _ 20 of of SCONJ IN _ _ _ _ _ 21 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 viral viral ADJ JJ Degree=Pos _ _ _ _ 25 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 26 cycle cycle NOUN NN Number=Sing _ _ _ _ 27 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 8383 # text = It had previously been thought that ZEBRA's capacity to disrupt EBV latency resided primarily in its ability to activate transcription of genes that encode products required for lytic replication. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 ZEBRA zebra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 's 's PART POS _ _ _ _ _ 9 capacity capacity NOUN NN Number=Sing _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 disrupt disrupt VERB VB VerbForm=Inf _ _ _ _ 12 EBV EBV PROPN NNP Number=Sing _ _ _ _ 13 latency latency NOUN NN Number=Sing _ _ _ _ 14 resided reside VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 primarily primarily ADV RB _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 ability ability NOUN NN Number=Sing _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 activate activate VERB VB VerbForm=Inf _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 genes gene NOUN NNS Number=Plur _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 encode encode VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 products product NOUN NNS Number=Plur _ _ _ _ 27 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 30 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 8384 # text = We generated a point mutant of ZEBRA, Z(S186A), that was not impaired in its ability to activate transcription; however, this mutation abolished its ability to initiate the viral lytic cascade. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 generated generate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 point point NOUN NN Number=Sing _ _ _ _ 5 mutant mutant NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 ZEBRA zebra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 Z Z PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 S s PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 186A 186A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 not not PART RB _ _ _ _ _ 18 impaired impaire VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 ability ability NOUN NN Number=Sing _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 activate activate VERB VB VerbForm=Inf _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ; ; PUNCT , _ _ _ _ _ 26 however however ADV RB _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 29 mutation mutation NOUN NN Number=Sing _ _ _ _ 30 abolished abolish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 32 ability ability NOUN NN Number=Sing _ _ _ _ 33 to to PART TO _ _ _ _ _ 34 initiate initiate VERB VB VerbForm=Inf _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 viral viral ADJ JJ Degree=Pos _ _ _ _ 37 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 38 cascade cascade NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 8385 # text = The mutant, containing a serine-to-alanine substitution in the DNA-binding domain of the protein, bound to several known ZEBRA-binding sites and activated transcription from reporters bearing known ZEBRA-responsive promoters but did not disrupt latency in EBV-infected cell lines. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mutant mutant NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 containing contain VERB VBG VerbForm=Ger _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 to to ADP IN _ _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alanine alanine NOUN NN Number=Sing _ _ _ _ 11 substitution substitution NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 domain domain NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 bound bound ADJ JJ Degree=Pos _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 several several ADJ JJ Degree=Pos _ _ _ _ 25 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 ZEBRA zebra NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 binding binding VERB VBG VerbForm=Ger _ _ _ _ 29 sites site NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 transcription transcription NOUN NN Number=Sing _ _ _ _ 33 from from ADP IN _ _ _ _ _ 34 reporters reporter NOUN NNS Number=Plur _ _ _ _ 35 bearing bear VERB VBG VerbForm=Ger _ _ _ _ 36 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 ZEBRA zebra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 40 promoters promoter NOUN NNS Number=Plur _ _ _ _ 41 but but CCONJ CC _ _ _ _ _ 42 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 43 not not PART RB _ _ _ _ _ 44 disrupt disrupt VERB VB VerbForm=Inf _ _ _ _ 45 latency latency NOUN NN Number=Sing _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 cell cell NOUN NN Number=Sing _ _ _ _ 51 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 8386 # text = Therefore, initiation of the EBV lytic cycle by the ZEBRA protein requires a function in addition to transcriptional activation; a change of serine 186 to alanine in the DNA-binding domain of ZEBRA abolished this additional function and uncovered a new role for the ZEBRA protein in disruption of EBV latency. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 initiation initiation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 EBV EBV PROPN NNP Number=Sing _ _ _ _ 7 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 8 cycle cycle NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 ZEBRA zebra PROPN NNP Number=Sing _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 function function NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 addition addition NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ; ; PUNCT , _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 change change NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 serine serine NOUN NN Number=Sing _ _ _ _ 26 186 186 NUM CD NumType=Card _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 alanine alanine NUM CD NumType=Card _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 binding bind VERB VBG VerbForm=Ger _ _ _ _ 34 domain domain NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 ZEBRA zebra PROPN NNP Number=Sing _ _ _ _ 37 abolished abolish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 39 additional additional ADJ JJ Degree=Pos _ _ _ _ 40 function function NOUN NN Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 uncovered uncover VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 43 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 44 new new ADJ JJ Degree=Pos _ _ _ _ 45 role role NOUN NN Number=Sing _ _ _ _ 46 for for ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 ZEBRA zebra PROPN NNP Number=Sing _ _ _ _ 49 protein protein NOUN NN Number=Sing _ _ _ _ 50 in in ADP IN _ _ _ _ _ 51 disruption disruption NOUN NN Number=Sing _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 EBV EBV PROPN NNP Number=Sing _ _ _ _ 54 latency latency NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 8387 # text = The additional function that is required for initiation of the lytic viral life cycle is likely to require phosphorylation of serine 186 of the ZEBRA protein, which may influence either DNA recognition or transcriptional activation of lytic viral promoters in a chromatinized viral episome. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 additional additional ADJ JJ Degree=Pos _ _ _ _ 3 function function NOUN NN Number=Sing _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 initiation initiation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 12 viral viral ADJ JJ Degree=Pos _ _ _ _ 13 life life NOUN NN Number=Sing _ _ _ _ 14 cycle cycle NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 likely likely ADJ JJ Degree=Pos _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 require require VERB VB VerbForm=Inf _ _ _ _ 19 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 serine serine NOUN NN Number=Sing _ _ _ _ 22 186 186 NUM CD NumType=Card _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 ZEBRA zebra PROPN NNP Number=Sing _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 which which PRON WDT PronType=Rel _ _ _ _ 29 may may AUX MD VerbForm=Fin _ _ _ _ 30 influence influence VERB VB VerbForm=Inf _ _ _ _ 31 either either CCONJ CC _ _ _ _ _ 32 DNA dna NOUN NN Number=Sing _ _ _ _ 33 recognition recognition NOUN NN Number=Sing _ _ _ _ 34 or or CCONJ CC _ _ _ _ _ 35 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 36 activation activation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 39 viral viral ADJ JJ Degree=Pos _ _ _ _ 40 promoters promoter NOUN NNS Number=Plur _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 chromatinized chromatinize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 viral viral ADJ JJ Degree=Pos _ _ _ _ 45 episome episome NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8388 # text = Document 0030011424 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011424 0030011424 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8389 # text = [An overexpression of retinoic acid receptor alpha blocks myeloid cell differentiation at the promyelocyte stage] Retinoic acid (RA), a vitamin A derivative, exerts a wide range of biological effects related to cell proliferation and differentiation. 1 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 6 acid acid ADJ JJ Degree=Pos _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 alpha alpha NOUN NN Number=Sing _ _ _ _ 9 blocks block NOUN NNS Number=Plur _ _ _ _ 10 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 13 at at ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 promyelocyte promyelocyte ADJ JJ Degree=Pos _ _ _ _ 16 stage stage NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n 18 Retinoic Retinoic ADJ JJ Degree=Pos _ _ _ _ 19 acid acid NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 vitamin vitamin NOUN NN Number=Sing _ _ _ _ 26 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 derivative derivative NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 exerts exert VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 wide wide ADJ JJ Degree=Pos _ _ _ _ 32 range range NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 biological biological ADJ JJ Degree=Pos _ _ _ _ 35 effects effect NOUN NNS Number=Plur _ _ _ _ 36 related related ADJ JJ Degree=Pos _ _ _ _ 37 to to PART TO _ _ _ _ _ 38 cell cell VERB VB VerbForm=Inf _ _ _ _ 39 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 8390 # text = The pleiotropic effects of RA are thought to be mediated through specific nuclear RA receptors (RARs). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 pleiotropic pleiotropic ADJ JJ Degree=Pos _ _ _ _ 3 effects effect NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 RA Ra NOUN NN Number=Sing _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 through through ADP IN _ _ _ _ _ 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 RA Ra NOUN NN Number=Sing _ _ _ _ 15 receptors receptor NOUN NNS Number=Plur _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 RARs RARs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 8391 # text = RARs are members of the steroid/thyroid hormone receptor superfamily and exhibit a molecular structure that possess discrete DNA-binding and RA (ligand)-binding domains. 1 RARs RAR NOUN NNS Number=Plur _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 members member NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 steroid steroid NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 thyroid thyroid NOUN NN Number=Sing _ _ _ _ 9 hormone hormone NOUN NN Number=Sing _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 superfamily superfamily ADV RB _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 exhibit exhibit VERB VB VerbForm=Inf _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 16 structure structure NOUN NN Number=Sing _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 possess possess VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 discrete discrete NOUN NN Number=Sing _ _ _ _ 20 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 binding binding VERB VBG VerbForm=Ger _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 RA Ra PROPN NNP Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 binding bind VERB VBG VerbForm=Ger _ _ _ _ 30 domains domain NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 8392 # text = In hematopoietic system, RA and RARs, predominantly RAR alpha may play key roles for the proliferation and differentiation of hematopoietic progenitors. 1 In in ADP IN _ _ _ _ _ 2 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 3 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 RA RA PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 RARs RARs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 predominantly predominantly ADV RB _ _ _ _ _ 10 RAR Rar PROPN NNP Number=Sing _ _ _ _ 11 alpha alpha PROPN NNP Number=Sing _ _ _ _ 12 may may AUX MD VerbForm=Fin _ _ _ _ 13 play play VERB VB VerbForm=Inf _ _ _ _ 14 key key ADJ JJ Degree=Pos _ _ _ _ 15 roles role NOUN NNS Number=Plur _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 23 progenitors progenitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 8393 # text = However, it is currently unknown how RA and RARs are involved in regulating normal hematopoietic differentiation. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 currently currently ADV RB _ _ _ _ _ 6 unknown unknown ADJ JJ Degree=Pos _ _ _ _ 7 how how ADV WRB PronType=Int _ _ _ _ 8 RA RA PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 RARs RARs PROPN NNPS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 involved involved ADJ JJ Degree=Pos _ _ _ _ 13 in in SCONJ IN _ _ _ _ _ 14 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 15 normal normal ADJ JJ Degree=Pos _ _ _ _ 16 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 17 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 8394 # text = To make clear the roles of RA and RAR alpha in the normal hematopoiesis, I have introduced the construct of human RAR alpha (hRAR alpha) into murine bone marrow cells with retroviral vector, and selected infected cells with drug resistant marker (Neo(r)) cultured on the stroma cell line (PA6-neo), and analyzed the behavior of infected cells. 1 To to PART TO _ _ _ _ _ 2 make make VERB VB VerbForm=Inf _ _ _ _ 3 clear clear ADJ JJ Degree=Pos _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 roles role NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 RA RA PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 RAR RAR PROPN NNP Number=Sing _ _ _ _ 10 alpha alpha ADV RB _ _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 normal normal ADJ JJ Degree=Pos _ _ _ _ 14 hematopoiesis hematopoiesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 17 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 introduced introduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 construct construct NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 RAR RAR NOUN NN Number=Sing _ _ _ _ 24 alpha alpha NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 hRAR hrar NOUN NN Number=Sing _ _ _ _ 27 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 into into ADP IN _ _ _ _ _ 30 murine murine NOUN NN Number=Sing _ _ _ _ 31 bone bone NOUN NN Number=Sing _ _ _ _ 32 marrow marrow ADJ JJ Degree=Pos _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 retroviral retroviral ADJ JJ Degree=Pos _ _ _ _ 36 vector vector NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 selected select VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 infected infect ADJ JJ Degree=Pos _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ _ 42 with with ADP IN _ _ _ _ _ 43 drug drug NOUN NN Number=Sing _ _ _ _ 44 resistant resistant NOUN NN Number=Sing _ _ _ _ 45 marker marker NOUN NN Number=Sing _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 Neo Neo PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 r be NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ _ 52 cultured culture VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 53 on on ADP IN _ _ _ _ _ 54 the the DET DT Definite=Def|PronType=Art _ _ _ _ 55 stroma stroma NOUN NN Number=Sing _ _ _ _ 56 cell cell NOUN NN Number=Sing _ _ _ _ 57 line line NOUN NN Number=Sing _ _ _ _ 58 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 59 PA6 PA6 NUM CD NumType=Card _ _ _ SpaceAfter=No 60 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 61 neo neo NOUN NN Number=Sing _ _ _ SpaceAfter=No 62 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 63 , , PUNCT , _ _ _ _ _ 64 and and CCONJ CC _ _ _ _ _ 65 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 66 the the DET DT Definite=Def|PronType=Art _ _ _ _ 67 behavior behavior NOUN NN Number=Sing _ _ _ _ 68 of of ADP IN _ _ _ _ _ 69 infected infect ADJ JJ Degree=Pos _ _ _ _ 70 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 71 . . PUNCT . _ _ _ _ _ # sent_id = 8395 # text = All of procedure were done in vitro. 1 All all DET DT _ _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 procedure procedure NOUN NN Number=Sing _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 done do VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 8396 # text = Most cells infected with hRAR alpha exhibited promyelocytic morphology and were thought to be blocked at the promyelocytic stage in their myeloid differentiation. 1 Most most ADJ JJS Degree=Sup _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 hRAR hrar PROPN NNP Number=Sing _ _ _ _ 6 alpha alpha ADV RB _ _ _ _ _ 7 exhibited exhibite VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ _ 9 morphology morphology NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 at at ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ _ 19 stage stage NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 22 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 23 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 8397 # text = Furthermore, these immature cells differentiated terminally into mature granulocytes by adding with RA (10(-6) M). 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 immature immature ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 terminally terminally ADV RB _ _ _ _ _ 8 into into ADP IN _ _ _ _ _ 9 mature mature ADJ JJ Degree=Pos _ _ _ _ 10 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ _ 11 by by SCONJ IN _ _ _ _ _ 12 adding add VERB VBG VerbForm=Ger _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 RA RA PROPN NNP Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 (- (- PUNCT . _ _ _ _ SpaceAfter=No 18 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 8398 # text = RAR alpha infected cells were also able to differentiate into mature macrophages in the both of long term culture and IL3 colony. 1 RAR Rar VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 alpha alpha ADP IN _ _ _ _ _ 3 infected infect ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 able able ADJ JJ Degree=Pos _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 differentiate differentiate VERB VB VerbForm=Inf _ _ _ _ 10 into into ADP IN _ _ _ _ _ 11 mature mature ADJ JJ Degree=Pos _ _ _ _ 12 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 both both DET DT _ _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 long long ADJ JJ Degree=Pos _ _ _ _ 18 term term NOUN NN Number=Sing _ _ _ _ 19 culture culture NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 IL3 IL3 NUM CD NumType=Card _ _ _ _ 22 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 8399 # text = These observations suggest that an overexpression of RAR alpha alone is effective to suppress myeloid cell differentiation and RAR alpha plays a crucial role in the terminal differentiation of myeloid precursors. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 RAR Rar PROPN NNP Number=Sing _ _ _ _ 9 alpha alpha ADV RB _ _ _ _ _ 10 alone alone ADV RB _ _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 effective effective ADJ JJ Degree=Pos _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 15 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 RAR Rar PROPN NNP Number=Sing _ _ _ _ 20 alpha alpha ADV RB _ _ _ _ _ 21 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 24 role role NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 28 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 31 precursors precursor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 8400 # text = The system described here may serve as a model for studying the the essential genes for differentiation of normal bone marrow cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 system system NOUN NN Number=Sing _ _ _ _ 3 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 here here ADV RB PronType=Dem _ _ _ _ 5 may may AUX MD VerbForm=Fin _ _ _ _ 6 serve serve VERB VB VerbForm=Inf _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 model model NOUN NN Number=Sing _ _ _ _ 10 for for SCONJ IN _ _ _ _ _ 11 studying study VERB VBG VerbForm=Ger _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 essential essential ADJ JJ Degree=Pos _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 normal normal ADJ JJ Degree=Pos _ _ _ _ 20 bone bone NOUN NN Number=Sing _ _ _ _ 21 marrow marrow NOUN NN Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8401 # text = Document 0030011426 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011426 0030011426 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8402 # text = Phosphatidylinositol 3-kinase couples the interleukin-2 receptor to the cell cycle regulator E2F. 1 Phosphatidylinositol Phosphatidylinositol PROPN NNP Number=Sing _ _ _ _ 2 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT : _ _ _ _ SpaceAfter=No 4 kinase kinase NOUN NN Number=Sing _ _ _ _ 5 couples couple NOUN NNS Number=Plur _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 cycle cycle NOUN NN Number=Sing _ _ _ _ 15 regulator regulator NOUN NN Number=Sing _ _ _ _ 16 E2F E2F PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8403 # text = Cell cycle progression initiated by interleukin-2 (IL-2) in T cells is critical for lymphoproliferation and an immune response. 1 Cell cell NOUN NN Number=Sing _ _ _ _ 2 cycle cycle NOUN NN Number=Sing _ _ _ _ 3 progression progression NOUN NN Number=Sing _ _ _ _ 4 initiated initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 X LS _ _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 critical critical ADJ JJ Degree=Pos _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 lymphoproliferation lymphoproliferation NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 immune immune ADJ JJ Degree=Pos _ _ _ _ 24 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8404 # text = Phosphatidyl inositol 3-kinase (PI3K) is activated by IL-2. 1 Phosphatidyl Phosphatidyl PROPN NNP Number=Sing _ _ _ _ 2 inositol inositol NOUN NN Number=Sing _ _ _ _ 3 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT : _ _ _ _ SpaceAfter=No 5 kinase kinase NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 PI3 PI3 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 K k NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 8405 # text = However, nuclear targets for PI3K are not known. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 targets target NOUN NNS Number=Plur _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 PI3 PI3 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 K k NUM CD NumType=Card _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 8406 # text = Here we identify the cell cycle regulator E2F as an IL-2 target in T lymphocytes and PI3K as the critical signaling pathway. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 identify identify VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 cycle cycle NOUN NN Number=Sing _ _ _ _ 7 regulator regulator NOUN NN Number=Sing _ _ _ _ 8 E2F E2f NOUN NN Number=Sing _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 target target NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 PI3 PI3 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 K k NUM CD NumType=Card _ _ _ _ 21 as as ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 critical critical ADJ JJ Degree=Pos _ _ _ _ 24 signaling signaling NOUN NN Number=Sing _ _ _ _ 25 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 8407 # text = We eliminate both Stat5 and Raf/MEK pathways from E2F regulation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 eliminate eliminate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 both both CCONJ CC _ _ _ _ _ 4 Stat5 Stat5 PROPN NNP Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 MEK MEK PROPN NNP Number=Sing _ _ _ _ 9 pathways pathways NOUN NNS Number=Plur _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 E2 E2 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 F F PROPN NNP Number=Sing _ _ _ _ 13 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 8408 # text = Protein kinase B (PKB) is activated by IL-2 via PI3K. 1 Protein protein NOUN NN Number=Sing _ _ _ _ 2 kinase kinase NOUN NN Number=Sing _ _ _ _ 3 B B PROPN NNP Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 PKB PKB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 via via ADP IN _ _ _ _ _ 14 PI3K PI3K NUM CD NumType=Card _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 8409 # text = The expression of an active PKB is sufficient to induce E2F activity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 active active ADJ JJ Degree=Pos _ _ _ _ 6 PKB Pkb NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 induce induce VERB VB VerbForm=Inf _ _ _ _ 11 E2 E2 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 F F PROPN NNP Number=Sing _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 8410 # text = Inhibition of PI3K inhibits phosphorylation of Rb, induction of cyclin D3, and degradation of p27kip1. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 PI3 PI3 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 K k NUM CD NumType=Card _ _ _ _ 5 inhibits inhibits NOUN NNS Number=Plur _ _ _ _ 6 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Rb Rb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 cyclin cyclin NOUN NN Number=Sing _ _ _ _ 13 D3 D3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 degradation degradation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 p27kip1 p27kip1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 8411 # text = These results establish a crucial PI3K/PKB-mediated link between the IL-2 teceptor and the cell cycle machinery. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 establish establish VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 6 PI3K Pi3k NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 8 PKB Pkb NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 mediated mediated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 link link NOUN NN Number=Sing _ _ _ _ 12 between between ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 teceptor teceptor NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 cycle cycle NOUN NN Number=Sing _ _ _ _ 22 machinery machinery NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8412 # text = Document 0030011427 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011427 0030011427 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8413 # text = Erythropoietin-dependent induction of hemoglobin synthesis in a cytokine-dependent cell line M-TAT. 1 Erythropoietin Erythropoietin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 4 induction induction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 hemoglobin hemoglobin ADJ JJ Degree=Pos _ _ _ _ 7 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 line line NOUN NN Number=Sing _ _ _ _ 15 M- M- PUNCT : _ _ _ _ SpaceAfter=No 16 TAT TAT NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8414 # text = M-TAT is a cytokine-dependent cell line with the potential to differentiate along the erythroid and megakaryocytic lineages. 1 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 TAT Tat NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 line line NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 potential potential NOUN NN Number=Sing _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 differentiate differentiate VERB VB VerbForm=Inf _ _ _ _ 16 along along ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 21 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 8415 # text = We cultured M-TAT cells long term (> 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 cultured culture VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 TAT Tat NOUN NN Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 long long ADJ JJ Degree=Pos _ _ _ _ 8 term term NOUN NN Number=Sing _ _ _ _ 9 (> (> PUNCT -RRB- _ _ _ _ _ # sent_id = 8416 # text = 1 year) in the continuous presence of erythropoietin (EPO), granulocyte-macrophage colony-stimulating factor (GM-CSF), or stem cell factor (SCF). 1 1 1 NUM CD NumType=Card _ _ _ _ 2 year year NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 continuous continuous ADJ JJ Degree=Pos _ _ _ _ 7 presence presence NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 erythropoietin erythropoietin PROPN NNP Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 EPO EPO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 17 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 stimulating stimulating NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 stem stem NOUN NN Number=Sing _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 SCF SCF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 8417 # text = These long term cultures are referred to as M-TAT/EPO, M-TAT/GM-CSF, and M-TAT/SCF cells, respectively. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 long long ADJ JJ Degree=Pos _ _ _ _ 3 term term NOUN NN Number=Sing _ _ _ _ 4 cultures culture NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 referred refer VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 M- M- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 TAT TAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 EPO EPO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 M- M- SYM NFP _ _ _ _ SpaceAfter=No 15 TAT/GM TAT/GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 M- M- NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 TAT Tat NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 / / PUNCT , _ _ _ _ SpaceAfter=No 23 SCF Scf NOUN NN Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 8418 # text = Hemoglobin concentration and gamma-globin and erythroid delta-aminolevulinate synthase mRNA levels were significantly higher in M-TAT/EPO cells than in M-TAT/GM-CSF cells. 1 Hemoglobin Hemoglobin ADP IN _ _ _ _ _ 2 concentration concentration NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 globin globin NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 9 delta- delta- PUNCT , _ _ _ _ SpaceAfter=No 10 aminolevulinate aminolevulinate ADJ JJ Degree=Pos _ _ _ _ 11 synthase synthase NOUN NN Number=Sing _ _ _ _ 12 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 13 levels level NOUN NNS Number=Plur _ _ _ _ 14 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 significantly significantly ADV RB _ _ _ _ _ 16 higher higher ADJ JJR Degree=Cmp _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 M- M- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 TAT TAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 EPO EPO PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 than than ADP IN _ _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 M- M- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 TAT/GM TAT/GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 CSF CSF PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 8419 # text = When the supplemented cytokine was switched from GM-CSF to EPO, hemoglobin synthesis in M-TAT/GM-CSF cells increased rapidly (within 5 h), and the level of GATA-1 mRNA increased. 1 When when ADV WRB PronType=Int _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 supplemented supplement VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 switched switch VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 CSF CSF PROPN NNP Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 EPO EPO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 hemoglobin hemoglobin ADP IN _ _ _ _ _ 15 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 M- M- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 TAT/GM TAT/GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 CSF CSF PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 rapidly rapidly ADV RB _ _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 within within ADP IN _ _ _ _ _ 26 5 5 NUM CD NumType=Card _ _ _ _ 27 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 level level NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ _ 37 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 38 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 8420 # text = In contrast, the addition of GM-CSF to the M-TAT/EPO cell culture decreased the amount of hemoglobin, even in the presence of EPO, indicating that the EPO signal for erythroid differentiation is suppressed by GM-CSF. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 addition addition NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 CSF CSF PROPN NNP Number=Sing _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 M- m- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 TAT TAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 EPO EPO PROPN NNP Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 culture culture NOUN NN Number=Sing _ _ _ _ 18 decreased decrease VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 amount amount NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 hemoglobin hemoglobin NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 even even ADV RB _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 presence presence NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 EPO EPO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 32 that that SCONJ IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 EPO EPO PROPN NNP Number=Sing _ _ _ _ 35 signal signal NOUN NN Number=Sing _ _ _ _ 36 for for ADP IN _ _ _ _ _ 37 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 38 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 39 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 40 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 41 by by ADP IN _ _ _ _ _ 42 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 8421 # text = Thus, erythroid development of M-TAT cells is promoted by EPO and suppressed by GM-CSF. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 4 development development NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 TAT Tat NOUN NN Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 promoted promote VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 EPO EPO PROPN NNP Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 8422 # text = These results support the hypothesis that EPO actively influences the programming of gene expression required for erythroid progenitor cell differentiation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 support support VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 EPO EPO PROPN NNP Number=Sing _ _ _ _ 8 actively actively ADV RB _ _ _ _ _ 9 influences influence VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 programming programming NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 gene gene ADJ JJ Degree=Pos _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 18 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8423 # text = Document 0030011432 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011432 0030011432 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8424 # text = Transcription factor NF-kappaB regulation of renal fibrosis during ureteral obstruction. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 6 regulation regulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 renal renal ADJ JJ Degree=Pos _ _ _ _ 9 fibrosis fibrosis NOUN NN Number=Sing _ _ _ _ 10 during during ADP IN _ _ _ _ _ 11 ureteral ureteral ADJ JJ Degree=Pos _ _ _ _ 12 obstruction obstruction NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8425 # text = Irrespective of the etiology, many kidney diseases result in inflammation and fibrosis of the tubulointerstitium, with the subsequent loss of renal function. 1 Irrespective irrespective ADJ JJ Degree=Pos _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 etiology etiology NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 many many ADJ JJ Degree=Pos _ _ _ _ 7 kidney kidney NOUN NN Number=Sing _ _ _ _ 8 diseases diseasis NOUN NNS Number=Plur _ _ _ _ 9 result result VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 fibrosis fibrosis NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 tubulointerstitium tubulointerstitium NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 21 loss loss NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 renal renal ADJ JJ Degree=Pos _ _ _ _ 24 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8426 # text = To initiate any disease process or for any disease process to progress, there must be changes in the transcription of genes within the affected tissue. 1 To to PART TO _ _ _ _ _ 2 initiate initiate VERB VB VerbForm=Inf _ _ _ _ 3 any any DET DT _ _ _ _ _ 4 disease disease NOUN NN Number=Sing _ _ _ _ 5 process process NOUN NN Number=Sing _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 any any DET DT _ _ _ _ _ 9 disease disease NOUN NN Number=Sing _ _ _ _ 10 process process NOUN NN Number=Sing _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 progress progress VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 there there PRON EX _ _ _ _ _ 15 must must AUX MD VerbForm=Fin _ _ _ _ 16 be be VERB VB VerbForm=Inf _ _ _ _ 17 changes change NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 genes gene NOUN NNS Number=Plur _ _ _ _ 23 within within ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 8427 # text = The nuclear factor-kappa B (NF-kappaB) family of transcription factors regulates genes involved in inflammation, cell proliferation, and cell differentiation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 family family NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ _ 16 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 involved involved ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 8428 # text = This review discusses the NF-kappaB transcription factor family in general and the association of NF-kappaB activation with cellular/molecular events of renal inflammation and fibrosis. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 review review NOUN NN Number=Sing _ _ _ _ 3 discusses discuss VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 family family NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 general general ADJ JJ Degree=Pos _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 association association NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 cellular cellular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 / / PUNCT , _ _ _ _ SpaceAfter=No 24 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 25 events event NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 renal renal ADJ JJ Degree=Pos _ _ _ _ 28 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 fibrosis fibrosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8429 # text = Document 0030011435 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011435 0030011435 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8430 # text = A negative role for phosphoinositide 3-kinase in T-cell antigen receptor function. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 negative negative ADJ JJ Degree=Pos _ _ _ _ 3 role role NOUN NN Number=Sing _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 phosphoinositide phosphoinositide NOUN NN Number=Sing _ _ _ _ 6 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT : _ _ _ _ SpaceAfter=No 8 kinase kinase NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ _ 14 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8431 # text = BACKGROUND: A delicate balance between positive and negative regulatory mechanisms during T-cell activation determines the specificity and magnitude of an immune response. 1 BACKGROUND background ADP IN _ _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 delicate delicate ADJ JJ Degree=Pos _ _ _ _ 5 balance balance NOUN NN Number=Sing _ _ _ _ 6 between between ADP IN _ _ _ _ _ 7 positive positive ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 negative negative ADJ JJ Degree=Pos _ _ _ _ 10 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 11 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 12 during during ADP IN _ _ _ _ _ 13 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 determines determine VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 specificity specificity NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 magnitude magnitude NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 immune immune ADJ JJ Degree=Pos _ _ _ _ 24 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8432 # text = Phosphoinositide 3-kinase (PI 3-kinase) is activated by a diverse set of receptors that determine T-cell function, including the T-cell antigen receptor (TCR), the costimulatory receptor CD28, and negative regulators of T-cell activation such as CTLA-4. 1 Phosphoinositide Phosphoinositide NOUN NN Number=Sing _ _ _ _ 2 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT : _ _ _ _ SpaceAfter=No 4 kinase kinase NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 PI PI NUM CD NumType=Card _ _ _ _ 7 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT : _ _ _ _ SpaceAfter=No 9 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 diverse diverse ADJ JJ Degree=Pos _ _ _ _ 16 set set NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 receptors receptor NOUN NNS Number=Plur _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 determine determine VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 including include VERB VBG VerbForm=Ger _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 antigen antigen NOUN NN Number=Sing _ _ _ _ 30 receptor receptor NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 TCR Tcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 37 receptor receptor NOUN NN Number=Sing _ _ _ _ 38 CD28 Cd28 NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 negative negative ADJ JJ Degree=Pos _ _ _ _ 42 regulators regulator NOUN NNS Number=Plur _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 cell cell NOUN NN Number=Sing _ _ _ _ 46 activation activation NOUN NN Number=Sing _ _ _ _ 47 such such ADJ JJ Degree=Pos _ _ _ _ 48 as as ADP IN _ _ _ _ _ 49 CTLA CTLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 8433 # text = PI 3-kinase is also regulated by the haematopoietic cytokines that determine T-cell differentiation and lymphocyte proliferation. 1 PI PI NOUN NN Number=Sing _ _ _ _ 2 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT : _ _ _ _ SpaceAfter=No 4 kinase kinase NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 haematopoietic haematopoietic ADJ JJ Degree=Pos _ _ _ _ 11 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 determine determine VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 19 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 8434 # text = PI 3-kinase can thus dynamically influence the outcome of the immune reactions at various stages. 1 PI PI NOUN NN Number=Sing _ _ _ _ 2 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT : _ _ _ _ SpaceAfter=No 4 kinase kinase NOUN NN Number=Sing _ _ _ _ 5 can can AUX MD VerbForm=Fin _ _ _ _ 6 thus thus ADV RB _ _ _ _ _ 7 dynamically dynamically ADV RB _ _ _ _ _ 8 influence influence VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 outcome outcome NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 immune immune ADJ JJ Degree=Pos _ _ _ _ 14 reactions reaction NOUN NNS Number=Plur _ _ _ _ 15 at at ADP IN _ _ _ _ _ 16 various various ADJ JJ Degree=Pos _ _ _ _ 17 stages stage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 8435 # text = In this study, we investigated the importance of PI 3-kinase in TCR-directed T-cell activation using activated or inhibitory versions of PI 3-kinase. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 importance importance NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 PI pi NUM CD NumType=Card _ _ _ _ 11 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT : _ _ _ _ SpaceAfter=No 13 kinase kinase NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 using use VERB VBG VerbForm=Ger _ _ _ _ 22 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 25 versions version NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 PI PI PROPN NNP Number=Sing _ _ _ _ 28 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 8436 # text = RESULTS: Certain aspects of TCR responses such as the induction of transcriptional activity of AP1 and serum response factor were not affected by expression of the mutant forms of PI 3-kinase. 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Certain certain ADJ JJ Degree=Pos _ _ _ _ 4 aspects aspect NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 TCR Tcr NOUN NN Number=Sing _ _ _ _ 7 responses response NOUN NNS Number=Plur _ _ _ _ 8 such such ADJ JJ Degree=Pos _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 induction induction NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 AP1 Ap1 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 serum serum NOUN NN Number=Sing _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 29 forms form NOUN NNS Number=Plur _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 PI pi NOUN NN Number=Sing _ _ _ _ 32 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 8437 # text = We found, however, that PI 3-kinase profoundly influenced the transactivation capacity of 'nuclear factor of activated T cells' (NF-AT) elicited by the TCR: expression of an activated form of PI 3-kinase inhibited TCR-mediated NF-AT responses, whereas expression of a dominant negative mutant of PI 3-kinase potently enhanced TCR-controlled NF-AT induction. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 however however ADV RB _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 PI PI PROPN NNP Number=Sing _ _ _ _ 8 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT : _ _ _ _ SpaceAfter=No 10 kinase kinase NOUN NN Number=Sing _ _ _ _ 11 profoundly profoundly ADV RB _ _ _ _ _ 12 influenced influence VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 15 capacity capacity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 ' ' PUNCT '' _ _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 AT at PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 elicited elicit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 TCR Tcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 : : PUNCT : _ _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 form form NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 PI PI PROPN NNP Number=Sing _ _ _ _ 42 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 - - PUNCT , _ _ _ _ SpaceAfter=No 44 kinase kinase NOUN NN Number=Sing _ _ _ _ 45 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 TCR TCR ADV RB _ _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 49 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 AT at NOUN NN Number=Sing _ _ _ _ 52 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 , , PUNCT , _ _ _ _ _ 54 whereas whereas SCONJ IN _ _ _ _ _ 55 expression expression NOUN NN Number=Sing _ _ _ _ 56 of of ADP IN _ _ _ _ _ 57 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 58 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 59 negative negative ADJ JJ Degree=Pos _ _ _ _ 60 mutant mutant NOUN NN Number=Sing _ _ _ _ 61 of of ADP IN _ _ _ _ _ 62 PI PI PROPN NNP Number=Sing _ _ _ _ 63 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 64 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 65 kinase kinase NOUN NN Number=Sing _ _ _ _ 66 potently potently ADV RB _ _ _ _ _ 67 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 68 TCR Tcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 69 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 70 controlled control VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 71 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 72 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 73 AT AT ADJ JJ Degree=Pos _ _ _ _ 74 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 75 . . PUNCT . _ _ _ _ _ # sent_id = 8438 # text = These effects of PI 3-kinase were not mediated by previously identified PI 3-kinase effectors, such as protein kinase B, a positive regulator of PI 3-kinase, or the GTPase Rac, and are therefore likely to involve a novel, as yet unknown, effector molecule. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 PI pi PROPN NNP Number=Sing _ _ _ _ 5 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT : _ _ _ _ SpaceAfter=No 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 previously previously ADV RB _ _ _ _ _ 13 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 PI PI NOUN NN Number=Sing _ _ _ _ 15 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kinase kinase NOUN NN Number=Sing _ _ _ _ 18 effectors effector NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 such such ADJ JJ Degree=Pos _ _ _ _ 21 as as ADP IN _ _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 kinase kinase NOUN NN Number=Sing _ _ _ _ 24 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 positive positive ADJ JJ Degree=Pos _ _ _ _ 28 regulator regulator NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 PI PI PROPN NNP Number=Sing _ _ _ _ 31 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 or or CCONJ CC _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 GTPase GTPase PROPN NNP Number=Sing _ _ _ _ 38 Rac rac PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 42 therefore therefore ADV RB _ _ _ _ _ 43 likely likely ADJ JJ Degree=Pos _ _ _ _ 44 to to PART TO _ _ _ _ _ 45 involve involve VERB VB VerbForm=Inf _ _ _ _ 46 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 47 novel novel NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 as as SCONJ IN _ _ _ _ _ 50 yet yet ADV RB _ _ _ _ _ 51 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 effector effector NOUN NN Number=Sing _ _ _ _ 54 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 8439 # text = CONCLUSIONS: 1 CONCLUSIONS conclusion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 8440 # text = Our results establish that PI 3-kinase can both positively and negatively regulate T-cell function, and uncover a previously unrecognized function for PI 3-kinase in T cells as a selective negative regulator of TCR-signalling events and therefore as a determinant of T-cell homeostasis. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 establish establish VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 PI PI PROPN NNP Number=Sing _ _ _ _ 6 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kinase kinase NOUN NN Number=Sing _ _ _ _ 9 can can AUX MD VerbForm=Fin _ _ _ _ 10 both both CCONJ CC _ _ _ _ _ 11 positively positively ADV RB _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 negatively negatively ADV RB _ _ _ _ _ 14 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 uncover uncover ADV RB _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 previously previously ADV RB _ _ _ _ _ 23 unrecognized unrecognized ADJ JJ Degree=Pos _ _ _ _ 24 function function NOUN NN Number=Sing _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 PI PI NUM CD NumType=Card _ _ _ _ 27 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kinase kinase NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 as as ADP IN _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 selective selective ADJ JJ Degree=Pos _ _ _ _ 36 negative negative ADJ JJ Degree=Pos _ _ _ _ 37 regulator regulator NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 TCR Tcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 signalling signalling VERB VBG VerbForm=Ger _ _ _ _ 42 events event NOUN NNS Number=Plur _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 therefore therefore ADV RB _ _ _ _ _ 45 as as ADP IN _ _ _ _ _ 46 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 47 determinant determinant NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 cell cell NOUN NN Number=Sing _ _ _ _ 51 homeostasis homeostasis NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8441 # text = Document 0030011444 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011444 0030011444 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8442 # text = Regulation of transcription of the human erythropoietin receptor gene by proteins binding to GATA-1 and Sp1 motifs. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 erythropoietin erythropoietin NOUN NN Number=Sing _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 binding bind VERB VBG VerbForm=Ger _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 19 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8443 # text = Erythropoietin (Epo), the primary regulator of the production of erythroid cells, acts by binding to a cell surface receptor (EpoR) on erythroid progenitors. 1 Erythropoietin Erythropoietin PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 Epo Epo PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 primary primary ADJ JJ Degree=Pos _ _ _ _ 8 regulator regulator NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 production production NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 by by SCONJ IN _ _ _ _ _ 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 surface surface NOUN NN Number=Sing _ _ _ _ 23 receptor receptor NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 EpoR EpoR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 on on ADP IN _ _ _ _ _ 28 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 29 progenitors progenitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 8444 # text = We used deletion analysis and transfection assays with reporter gene constructs to examine the transcription control elements in the 5' flanking region of the human EpoR gene. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 deletion deletion NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 transfection transfection NOUN NN Number=Sing _ _ _ _ 7 assays assay NOUN NNS Number=Plur _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 reporter reporter NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 constructs construct NOUN NNS Number=Plur _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 examine examine VERB VB VerbForm=Inf _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 control control NOUN NN Number=Sing _ _ _ _ 17 elements element NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ' ' PUNCT `` _ _ _ _ _ 22 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 23 region region NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 EpoR Epor NOUN NN Number=Sing _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 8445 # text = In erythroid cells most of the transcription activity was contained in a 150 bp promoter fragment with binding sites for transcription factors AP2, Sp1 and the erythroid-specific GATA-1. 1 In in ADP IN _ _ _ _ _ 2 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 most most ADJ JJS Degree=Sup _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 contained contain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 150 150 NUM CD NumType=Card _ _ _ _ 14 bp bp NOUN NN Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 fragment fragment NOUN NN Number=Sing _ _ _ _ 17 with with SCONJ IN _ _ _ _ _ 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 sites site NOUN NNS Number=Plur _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ _ 23 AP2 AP2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 specific specific ADJ JJ Degree=Pos _ _ _ _ 31 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 8446 # text = The 150 bp hEpoR promoter exhibited high and low activity in erythroid OCIM1 and K562 cells, respectively, reflecting the high and low levels of constitutive hEpoR expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 150 150 NUM CD NumType=Card _ _ _ _ 3 bp bp NOUN NN Number=Sing _ _ _ _ 4 hEpoR hepor CCONJ CC _ _ _ _ _ 5 promoter promoter ADV RB _ _ _ _ _ 6 exhibited exhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 high high ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 low low ADJ JJ Degree=Pos _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 erythroid erythroid PROPN NNP Number=Sing _ _ _ _ 13 OCIM1 OCIM1 PROPN NNP Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 K562 K562 NUM CD NumType=Card _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 reflecting reflect VERB VBG VerbForm=Ger _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 high high ADJ JJ Degree=Pos _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 low low ADJ JJ Degree=Pos _ _ _ _ 25 levels level NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 28 hEpoR hepor NOUN NN Number=Sing _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 8447 # text = The GATA-1 and Sp1 binding sites in this promoter lacking a TATA sequence were necessary for a high level of transcription activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 GATA GATA NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 sites site NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 TATA TATa PROPN NNP Number=Sing _ _ _ _ 15 sequence sequence NOUN NN Number=Sing _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 high high ADJ JJ Degree=Pos _ _ _ _ 21 level level NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8448 # text = Protein-DNA binding studies suggested that Sp1 and two other CCGCCC binding proteins from erythroid and non-erythroid cells could bind to the Sp1 binding motif. 1 Protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 DNA dna NOUN NN Number=Sing _ _ _ _ 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 studies study NOUN NNS Number=Plur _ _ _ _ 6 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 Sp1 sp1 PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 two two NUM CD NumType=Card _ _ _ _ 11 other other ADJ JJ Degree=Pos _ _ _ _ 12 CCGCCC Ccgccc NOUN NN Number=Sing _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 proteins protein NOUN NNS Number=Plur _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 erythroid erythroid NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 non-erythroid non-erythroid ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 could could AUX MD VerbForm=Fin _ _ _ _ 21 bind bind VERB VB VerbForm=Inf _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 25 binding bind VERB VBG VerbForm=Ger _ _ _ _ 26 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 8449 # text = By increasing GATA-1 levels via co-transfection, we were able to transactivate the hEpoR promoter in K562 cells and non-erythroid cells, but not in the highly active OCIM1 cells, although GATA-1 mRNA levels were comparable in OCIM1 and K562. 1 By by SCONJ IN _ _ _ _ _ 2 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 3 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 via via ADP IN _ _ _ _ _ 8 co-transfection co-transfection NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 able able ADJ JJ Degree=Pos _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 transactivate transactivate VERB VB VerbForm=Inf _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 hEpoR hepor NOUN NN Number=Sing _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 K562 K562 NUM CD NumType=Card _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 non-erythroid non-erythroid ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 but but CCONJ CC _ _ _ _ _ 26 not not ADV RB _ _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 highly highly ADV RB _ _ _ _ _ 30 active active ADJ JJ Degree=Pos _ _ _ _ 31 OCIM1 Ocim1 NUM CD NumType=Card _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 although although SCONJ IN _ _ _ _ _ 35 GATA GATA NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ _ 38 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 39 levels level NOUN NNS Number=Plur _ _ _ _ 40 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 41 comparable comparable ADJ JJ Degree=Pos _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 OCIM1 Ocim1 NUM CD NumType=Card _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 K562 k562 NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 8450 # text = Interestingly, when we mutated the Sp1 site, resulting in a marked decrease in hEpoR promoter activity, we could restore transactivation by increasing GATA-1 levels in OCIM1 cells. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 when when ADV WRB PronType=Int _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 mutated mutate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 8 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 resulting result VERB VBG VerbForm=Ger _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 decrease decrease NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 hEpoR hepor ADJ JJ Degree=Pos _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 21 could could AUX MD VerbForm=Fin _ _ _ _ 22 restore restore VERB VB VerbForm=Inf _ _ _ _ 23 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 24 by by SCONJ IN _ _ _ _ _ 25 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 26 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 levels level NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 OCIM1 OCIM1 NUM CD NumType=Card _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 8451 # text = These data suggest that while GATA-1 can transactivate the EpoR promoter, the level of hEpoR gene expression does not depend on GATA-1 alone. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 while while SCONJ IN _ _ _ _ _ 6 GATA GATA NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 can can AUX MD VerbForm=Fin _ _ _ _ 10 transactivate transactivate VERB VB VerbForm=Inf _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 EpoR EpoR PROPN NNP Number=Sing _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 level level NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 hEpoR hepor NOUN NN Number=Sing _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 depend depend VERB VB VerbForm=Inf _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 1 1 X LS _ _ _ _ _ 28 alone alone ADV RB _ _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 8452 # text = Rather, hEpoR transcription activity depends on coordination between Sp1 and GATA-1 with other cell-specific factors, including possibly other Sp1-like binding proteins, to provide high level, tissue-specific expression. 1 Rather Rather PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 hEpoR hepor CCONJ CC _ _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 depends depend VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 coordination coordination NOUN NN Number=Sing _ _ _ _ 9 between between ADP IN _ _ _ _ _ 10 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 other other ADJ JJ Degree=Pos _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 including include VERB VBG VerbForm=Ger _ _ _ _ 23 possibly possibly ADV RB _ _ _ _ _ 24 other other ADJ JJ Degree=Pos _ _ _ _ 25 Sp1 Sp1 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 like like SCONJ IN _ _ _ _ _ 28 binding bind VERB VBG VerbForm=Ger _ _ _ _ 29 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 provide provide VERB VB VerbForm=Inf _ _ _ _ 33 high high ADJ JJ Degree=Pos _ _ _ _ 34 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 tissue- tissue- SYM NFP _ _ _ _ SpaceAfter=No 37 specific specific ADJ JJ Degree=Pos _ _ _ _ 38 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8453 # text = Document 0030011445 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011445 0030011445 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8454 # text = Alcohol-induced regulation of nuclear regulatory factor-kappa beta in human monocytes. 1 Alcohol alcohol INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 beta beta NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8455 # text = Acute ethanol exposure has the capacity to modulate immune functions, particularly, to down regulate monocyte production of inflammatory cytokines. 1 Acute Acute ADV RB _ _ _ _ _ 2 ethanol ethanol ADJ JJ Degree=Pos _ _ _ _ 3 exposure exposure NOUN NN Number=Sing _ _ _ _ 4 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 capacity capacity NOUN NN Number=Sing _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 9 immune immune ADJ JJ Degree=Pos _ _ _ _ 10 functions function NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 particularly particularly ADV RB _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 down down ADV RB _ _ _ _ _ 16 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 17 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 18 production production NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 21 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 8456 # text = However, the intracellular mechanisms for these effects of ethanol are yet to be understood. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 5 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 effects effect NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 ethanol ethanol NOUN NN Number=Sing _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 yet yet ADV RB _ _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 understood understand VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 8457 # text = Considering that nuclear regulatory factor-kappa beta (NF-kappa B)/Rel is a common regulatory element of the promoter region of the inflammatory cytokine genes, herein, we tested the hypothesis that acute ethanol affects NF-kappa B activation in human monocytes. 1 Considering consider VERB VBG VerbForm=Ger _ _ _ _ 2 that that SCONJ IN _ _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 beta beta NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 Rel Rel PROPN NNP Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 common common ADJ JJ Degree=Pos _ _ _ _ 20 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 21 element element NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 promoter promoter NOUN NN Number=Sing _ _ _ _ 25 region region NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 29 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 30 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 herein herein ADV RB _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 35 tested test VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 38 that that PRON WDT PronType=Rel _ _ _ _ 39 acute acute VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 40 ethanol ethanol ADJ JJ Degree=Pos _ _ _ _ 41 affects affect NOUN NNS Number=Plur _ _ _ _ 42 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 kappa kappa NOUN NN Number=Sing _ _ _ _ 45 B b NOUN NN Number=Sing _ _ _ _ 46 activation activation NOUN NN Number=Sing _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 human human ADJ JJ Degree=Pos _ _ _ _ 49 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 8458 # text = Adherence-isolated monocytes showed constitutive DNA binding activity of NF-kappa B. 1 Adherence Adherence NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 7 DNA dna NOUN NN Number=Sing _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ 14 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 8459 # text = A clinically relevant dose (25 mM) of acute ethanol treatment in vitro increased NF-kappa B binding activity in monocytes with a preferential induction of the inhibitory, p50/p50, NF-kappa B/Rel homodimer, and resulted in no induction of the p65/p50 heterodimer. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 clinically clinically ADV RB _ _ _ _ _ 3 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 4 dose dose NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 25 25 NUM CD NumType=Card _ _ _ _ 7 mM mm NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 acute acute ADJ JJ Degree=Pos _ _ _ _ 11 ethanol ethanol ADJ JJ Degree=Pos _ _ _ _ 12 treatment treatment NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 vitro vitro NOUN NN Number=Sing _ _ _ _ 15 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B b PROPN NNP Number=Sing _ _ _ _ 20 binding binde VERB VBG VerbForm=Ger _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 preferential preferential ADJ JJ Degree=Pos _ _ _ _ 27 induction induction NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 inhibitory inhibitory NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 / / PUNCT , _ _ _ _ SpaceAfter=No 34 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 kappa kappa PROPN NNP Number=Sing _ _ _ _ 39 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 / / PUNCT , _ _ _ _ SpaceAfter=No 41 Rel Rel PROPN NNP Number=Sing _ _ _ _ 42 homodimer homodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 no no DET DT _ _ _ _ _ 48 induction induction NOUN NN Number=Sing _ _ _ _ 49 of of ADP IN _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 p65/ p65/ SYM SYM _ _ _ _ SpaceAfter=No 52 p50 p50 NUM CD NumType=Card _ _ _ _ 53 heterodimer heterodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 8460 # text = In contrast, lipopolysaccharide stimulation primarily induced the p65/p50 heterodimer that has been shown to result in gene activation. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 5 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 6 primarily primarily ADV RB _ _ _ _ _ 7 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 p50 p50 NUM CD NumType=Card _ _ _ _ 12 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 16 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 result result VERB VB VerbForm=Inf _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 gene gene ADJ JJ Degree=Pos _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 8461 # text = Thus, such unique activation of the inhibitory p50/p50 homodimer by acute ethanol treatment may result in inhibition rather than activation of NF-kappa B-regulated inflammatory cytokine genes. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 such such ADJ JJ Degree=Pos _ _ _ _ 4 unique unique ADJ JJ Degree=Pos _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 9 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 p50 p50 NUM CD NumType=Card _ _ _ _ 12 homodimer homodimer NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 acute acute ADJ JJ Degree=Pos _ _ _ _ 15 ethanol ethanol ADJ JJ Degree=Pos _ _ _ _ 16 treatment treatment NOUN NN Number=Sing _ _ _ _ 17 may may AUX MD VerbForm=Fin _ _ _ _ 18 result result VERB VB VerbForm=Inf _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 21 rather rather ADV RB _ _ _ _ _ 22 than than ADP IN _ _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 32 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 33 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 8462 # text = Consequently, these results suggest that physiologically relevant concentrations of ethanol may affect production of inflammatory cytokines, such as tumor necrosis factor-alpha, interleukin-1 beta, and interleukin-6 by disrupting NF-kappa B signaling in monocytes. 1 Consequently consequently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 physiologically physiologically ADV RB _ _ _ _ _ 8 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 9 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 ethanol ethanol NOUN NN Number=Sing _ _ _ _ 12 may may AUX MD VerbForm=Fin _ _ _ _ 13 affect affect VERB VB VerbForm=Inf _ _ _ _ 14 production production NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 17 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 such such ADJ JJ Degree=Pos _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 tumor tumor NOUN NN Number=Sing _ _ _ _ 22 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 -alpha -alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 6 6 NUM CD NumType=Card _ _ _ _ 35 by by SCONJ IN _ _ _ _ _ 36 disrupting disrupting VERB VBG VerbForm=Ger _ _ _ _ 37 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 kappa kappa PROPN NNP Number=Sing _ _ _ _ 40 B b PROPN NNP Number=Sing _ _ _ _ 41 signaling signaling VERB VBG VerbForm=Ger _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8463 # text = Document 0030011448 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011448 0030011448 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8464 # text = Cloning and functional characterization of early B-cell factor, a regulator of lymphocyte-specific gene expression. 1 Cloning Clon VERB VBG VerbForm=Ger _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 functional functional ADJ JJ Degree=Pos _ _ _ _ 4 characterization characterization NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 early early ADJ JJ Degree=Pos _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 regulator regulator NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 lymphocyte lymphocyte ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8465 # text = Early B-cell factor (EBF) was identified previously as a tissue-specific and differentiation stage-specific DNA-binding protein that participates in the regulation of the pre-B and B lymphocyte-specific mb-1 gene. 1 Early Early ADJ JJ Degree=Pos _ _ _ _ 2 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 EBF EBF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 previously previously ADV RB _ _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 19 stage stage NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 specific specific ADJ JJ Degree=Pos _ _ _ _ 22 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 binding binding VERB VBG VerbForm=Ger _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ _ 26 that that PRON WDT PronType=Rel _ _ _ _ 27 participates participate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 regulation regulation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 pre pre X AFX _ _ _ _ SpaceAfter=No 34 -B -b ADJ JJ Degree=Pos _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 B b ADJ JJ Degree=Pos _ _ _ _ 37 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 specific specific ADJ JJ Degree=Pos _ _ _ _ 40 mb mb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 -1 -1 NUM CD NumType=Card _ _ _ _ 42 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 8466 # text = Partial amino acid sequences obtained from purified EBF were used to isolate cDNA clones, which by multiple criteria encode EBF. 1 Partial partial ADJ JJ Degree=Pos _ _ _ _ 2 amino amino DET DT _ _ _ _ _ 3 acid acid ADJ JJ Degree=Pos _ _ _ _ 4 sequences sequence NOUN NNS Number=Plur _ _ _ _ 5 obtained obtain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 EBF EBF PROPN NNP Number=Sing _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 isolate isolate VERB VB VerbForm=Inf _ _ _ _ 13 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 14 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 19 criteria criteria NOUN NN Number=Sing _ _ _ _ 20 encode encode ADP IN _ _ _ _ _ 21 EBF EBF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 8467 # text = The recombinant polypeptide formed sequence-specific complexes with the EBF-binding site in the mb-1 promoter. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 3 polypeptide polypeptide NOUN NN Number=Sing _ _ _ _ 4 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 complexes complex NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 EBF Ebf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 binding binding VERB VBG VerbForm=Ger _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 mb mb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 -1 -1 NUM CD NumType=Card _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 8468 # text = The cDNA hybridized to multiple transcripts in pre-B and B-cell lines, but transcripts were not detected at significant levels in plasmacytoma, T-cell, and nonlymphoid cell lines. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cDNA cDNA NOUN NN Number=Sing _ _ _ _ 3 hybridized hybridize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 6 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 pre pre ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 -B -b NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 18 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 at at ADP IN _ _ _ _ _ 22 significant significant ADJ JJ Degree=Pos _ _ _ _ 23 levels level NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 plasmacytoma plasmacytoma NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 nonlymphoid nonlymphoid ADJ JJ Degree=Pos _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 8469 # text = Expression of recombinant EBF in transfected nonlymphoid cells strongly activated transcription from reporter plasmids containing functional EBF-binding sites. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 4 EBF EBF PROPN NNP Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 nonlymphoid nonlymphoid ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 strongly strongly ADV RB _ _ _ _ _ 10 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 reporter reporter NOUN NN Number=Sing _ _ _ _ 14 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 15 containing contain VERB VBG VerbForm=Ger _ _ _ _ 16 functional functional ADJ JJ Degree=Pos _ _ _ _ 17 EBF EBF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 8470 # text = Analysis of DNA binding by deletion mutants of EBF identified an amino-terminal cysteine-rich DNA-binding domain lacking obvious sequence similarity to known transcription factors. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 DNA dna NOUN NN Number=Sing _ _ _ _ 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 deletion deletion NOUN NN Number=Sing _ _ _ _ 7 mutants mutant NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 EBF EBF PROPN NNP Number=Sing _ _ _ _ 10 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 amino-terminal amino-terminal ADJ JJ Degree=Pos _ _ _ _ 13 cysteine cysteine NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 rich rich ADJ JJ Degree=Pos _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 binding binding VERB VBG VerbForm=Ger _ _ _ _ 19 domain domain NOUN NN Number=Sing _ _ _ _ 20 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 21 obvious obvious ADJ JJ Degree=Pos _ _ _ _ 22 sequence sequence NOUN NN Number=Sing _ _ _ _ 23 similarity similarity NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 known known VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 8471 # text = DNA-binding assays with cotranslated wild-type and truncated forms of EBF indicated that the protein interacts with its site as a homodimer. 1 DNA- DNA- SYM NFP _ _ _ _ SpaceAfter=No 2 binding bind VERB VBG VerbForm=Ger _ _ _ _ 3 assays assay NOUN NNS Number=Plur _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 cotranslated cotranslate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 type type NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 truncated truncated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 forms form NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 EBF EBF PROPN NNP Number=Sing _ _ _ _ 14 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 interacts interact NOUN NNS Number=Plur _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 site site NOUN NN Number=Sing _ _ _ _ 22 as as ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 homodimer homodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8472 # text = Deletions delineated a carboxy-terminal dimerization region containing two repeats of 15 amino acids that show similarity with the dimerization domains of basic-helix-loop-helix proteins. 1 Deletions Deletion NOUN NNS Number=Plur _ _ _ _ 2 delineated delineate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 carboxy carboxy NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 7 dimerization dimerization NOUN NN Number=Sing _ _ _ _ 8 region region NOUN NN Number=Sing _ _ _ _ 9 containing contain VERB VBG VerbForm=Ger _ _ _ _ 10 two two NUM CD NumType=Card _ _ _ _ 11 repeats repeat NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 15 15 NUM CD NumType=Card _ _ _ _ 14 amino amino ADJ JJ Degree=Pos _ _ _ _ 15 acids acid NOUN NNS Number=Plur _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 similarity similarity NOUN NN Number=Sing _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 dimerization dimerization NOUN NN Number=Sing _ _ _ _ 22 domains domain NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 basic-helix-loop basic-helix-loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 -helix -helix NOUN NN Number=Sing _ _ _ _ 26 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 8473 # text = Together, these data suggest that EBF represents a novel regulator of B lymphocyte-specific gene expression. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 data data NOUN NN Number=Sing _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 EBF EBF PROPN NNP Number=Sing _ _ _ _ 8 represents represent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 novel novel NOUN NN Number=Sing _ _ _ _ 11 regulator regulator NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8474 # text = Document 0030011454 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011454 0030011454 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8475 # text = Signal transduction pathways triggered by the FcepsilonRIIb receptor (CD23) in human monocytes lead to nuclear factor-kappaB activation. 1 Signal signal ADJ JJ Degree=Pos _ _ _ _ 2 transduction transduction NOUN NN Number=Sing _ _ _ _ 3 pathways pathway NOUN NNS Number=Plur _ _ _ _ 4 triggered trigger VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 FcepsilonRIIb FcepsilonRIIb PROPN NNP Number=Sing _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 CD23 CD23 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 15 lead lead VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappab NOUN NN Number=Sing _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8476 # text = BACKGROUND: Alveolar macrophages play a key role in the initiation of the inflammatory reaction of allergic asthma. 1 BACKGROUND background ADP IN _ _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Alveolar Alveolar ADJ JJ Degree=Pos _ _ _ _ 4 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 5 play play VERB VB VerbForm=Inf _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 key key ADJ JJ Degree=Pos _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 initiation initiation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 15 reaction reaction NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 allergic allergic ADJ JJ Degree=Pos _ _ _ _ 18 asthma asthma NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 8477 # text = Alveolar macrophages and peripheral blood monocytes are activated when IgE/allergen immune complexes bind to the CD23 receptor, which leads to the production of inflammatory cytokines. 1 Alveolar Alveolar ADJ JJ Degree=Pos _ _ _ _ 2 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 5 blood blood NOUN NN Number=Sing _ _ _ _ 6 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 when when ADV WRB PronType=Int _ _ _ _ 10 IgE Ige ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 allergen allergen VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 immune immune PRON PRP _ _ _ _ _ 14 complexes complex NOUN NNS Number=Plur _ _ _ _ 15 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 CD23 CD23 NOUN NN Number=Sing _ _ _ _ 19 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 production production NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 28 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 8478 # text = OBJECTIVE: 1 OBJECTIVE objective NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 8479 # text = We sought to investigate the molecular mechanisms regulating this early inflammatory response. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 sought seek VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 7 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 8 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 9 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 10 early early ADJ JJ Degree=Pos _ _ _ _ 11 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 12 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 8480 # text = We have focused on the study of the signal transduction pathways triggered by CD23 in human monocytes and the promonocytic cell line U937. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 focused focus VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 study study NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 signal signal ADJ JJ Degree=Pos _ _ _ _ 10 transduction transduction NOUN NN Number=Sing _ _ _ _ 11 pathways pathway NOUN NNS Number=Plur _ _ _ _ 12 triggered trigger VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 CD23 CD23 NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 line line NOUN NN Number=Sing _ _ _ _ 23 U937 U937 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 8481 # text = METHODS: CD23 was cross-linked in human monocytes and U937 cells with IgE immune complexes. 1 METHODS method NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 CD23 CD23 NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 cross cross ADV RB _ _ _ _ SpaceAfter=No 6 -linked -link VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 U937 U937 NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 IgE Ige PROPN NNP Number=Sing _ _ _ _ 15 immune immune VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 complexes complexe NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 8482 # text = Surface expression of CD23 was determined by FACS analysis. 1 Surface surface NOUN NN Number=Sing _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 CD23 CD23 NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 FACS FACS ADJ JJ Degree=Pos _ _ _ _ 9 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 8483 # text = Transcription factor activation and gene transcription were studied by gel-shift assays and Northern blot analysis, respectively. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 gel gel NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 shift shift NOUN NN Number=Sing _ _ _ _ 13 assays assay NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 16 blot blot NOUN NN Number=Sing _ _ _ _ 17 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 8484 # text = IkappaBalpha phosphorylation and degradation was analyzed by Western blot. 1 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 2 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 degradation degradation NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 Western western ADJ JJ Degree=Pos _ _ _ _ 9 blot blot NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 8485 # text = RESULTS: Nuclear factor (NF)-kappaB is the main transcription factor involved in the gene activation that follows CD23 cross-linking in monocytes. 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 - - PUNCT : _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 main main ADJ JJ Degree=Pos _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 follows follow VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 CD23 CD23 NOUN NN Number=Sing _ _ _ _ 23 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 8486 # text = CD23-induced NF-kappaB is a heterodimer composed of p65/p50 subunits. 1 CD23 CD23 NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 -induced -induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 9 composed compose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 p65/ p65/ SYM SYM _ _ _ _ SpaceAfter=No 12 p50 p50 NUM CD NumType=Card _ _ _ _ 13 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 8487 # text = NF-kappaB nuclear translocation is secondary to the phosphorylation and subsequent degradation of the NF-kappaB inhibitory molecule IkappaBalpha. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 translocation translocation NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 secondary secondary ADJ JJ Degree=Pos _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 13 degradation degradation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 19 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 20 molecule molecule NOUN NN Number=Sing _ _ _ _ 21 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 8488 # text = Tyrosine kinase-dependent, and not protein kinase C-dependent, pathways mediate CD23-triggered NF-kappaB activation but do not participate in the direct phosphorylation of IkappaBalpha. 1 Tyrosine Tyrosine NOUN NN Number=Sing _ _ _ _ 2 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 protein protein VERB VB VerbForm=Inf _ _ _ _ 9 kinase kinase NOUN NN Number=Sing _ _ _ _ 10 C c NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 pathways pathway NOUN NNS Number=Plur _ _ _ _ 15 mediate mediate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 CD23 CD23 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 triggered trigger VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ _ 23 but but CCONJ CC _ _ _ _ _ 24 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 not not PART RB _ _ _ _ _ 26 participate participate VERB VB VerbForm=Inf _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 direct direct ADJ JJ Degree=Pos _ _ _ _ 30 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 8489 # text = IkappaBalpha degradation and NF-kappaB nuclear translocation correlate with transcriptional activation of the inflammatory cytokines TNF-alpha and IL-1beta. 1 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 2 degradation degradation NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 translocation translocation NOUN NN Number=Sing _ _ _ _ 9 correlate correlate NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 16 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 17 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 alpha alpha NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8490 # text = CONCLUSIONS: NF-kappaB is the main transcription factor involved in the signal transduction pathway of CD23 in monocytes. 1 CONCLUSIONS conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 main main ADJ JJ Degree=Pos _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 signal signal NOUN NN Number=Sing _ _ _ _ 15 transduction transduction NOUN NN Number=Sing _ _ _ _ 16 pathway pathway NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 CD23 CD23 NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8491 # text = Document 0030011455 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011455 0030011455 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8492 # text = Role of Egr-2 in up-regulation of Fas ligand in normal T cells and aberrant double-negative lpr and gld T cells. 1 Role role NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 up up ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 regulation regulation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 Fas Fas PROPN NNP Number=Sing _ _ _ _ 12 ligand ligand NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 normal normal ADJ JJ Degree=Pos _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 aberrant aberrant ADJ JJ Degree=Pos _ _ _ _ 19 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 negative negative ADJ JJ Degree=Pos _ _ _ _ 22 lpr lpr NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 gld gld ADJ JJ Degree=Pos _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8493 # text = We previously identified a Fas ligand regulatory element (FLRE) in the Fas ligand (fasL) promoter that binds 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 previously previously ADV RB _ _ _ _ _ 3 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 Fas Fas PROPN NNPS Number=Plur _ _ _ _ 6 ligand ligand NOUN NN Number=Sing _ _ _ _ 7 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 8 element element NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 FLRE FLRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 Fas Fas PROPN NNPS Number=Plur _ _ _ _ 15 ligand ligand NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 fasL fasL NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ # sent_id = 8494 # text = Egr family proteins and demonstrated that Egr-3 (PILOT) but not Egr-1 (NGFI-A, Krox-24, Tis-8, and Zif-268) induces transcription of fasL. 1 Egr Egr ADJ JJ Degree=Pos _ _ _ _ 2 family family NOUN NN Number=Sing _ _ _ _ 3 proteins protein NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 -3 -3 NUM CD NumType=Card _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 PILOT Pilot NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 not not ADV RB _ _ _ _ _ 14 Egr Egr ADV RBR Degree=Cmp _ _ _ SpaceAfter=No 15 -1 -1 NUM CD NumType=Card _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 NGFI Ngfi NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 Krox Krox PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 24 24 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 Tis tis PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 -8 -8 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 Zif Zif PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - SYM SYM _ _ _ _ SpaceAfter=No 31 268 268 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 induces induce NOUN NNS Number=Plur _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 fasL fasL NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 8495 # text = The aberrant CD4(-)CD8(-) 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 aberrant aberrant NOUN NN Number=Sing _ _ _ _ 3 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 -) -) PUNCT . _ _ _ _ SpaceAfter=No 6 CD8 Cd8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 (-) (-) PUNCT . _ _ _ _ _ # sent_id = 8496 # text = T cells from lpr/lpr and gld/gld mice, which have mutations in the genes encoding Fas and FasL, respectively, have an activated phenotype and constitutively express high levels of fasL mRNA, prompting us to ask what role if any the FLRE and Egr family proteins have in this aberrant expression of fasL. 1 T t ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 lpr/ lpr/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 5 lpr lpr NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 gld gld NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 gld gld NOUN NN Number=Sing _ _ _ _ 10 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 mutations mutation NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 19 Fas Fa NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 FasL Fasl ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 constitutively constitutively ADV RB _ _ _ _ _ 31 express express ADJ JJ Degree=Pos _ _ _ _ 32 high high ADJ JJ Degree=Pos _ _ _ _ 33 levels level NOUN NNS Number=Plur _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 fasL fasL PROPN NNP Number=Sing _ _ _ _ 36 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 prompting prompt VERB VBG VerbForm=Ger _ _ _ _ 39 us we PRON PRP Case=Acc|Number=Plur|Person=1|PronType=Prs _ _ _ _ 40 to to PART TO _ _ _ _ _ 41 ask ask VERB VB VerbForm=Inf _ _ _ _ 42 what what DET WDT PronType=Int _ _ _ _ 43 role role NOUN NN Number=Sing _ _ _ _ 44 if if SCONJ IN _ _ _ _ _ 45 any any DET DT _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 FLRE Flre ADJ JJ Degree=Pos _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 Egr Egr ADJ JJ Degree=Pos _ _ _ _ 50 family family NOUN NN Number=Sing _ _ _ _ 51 proteins protein NOUN NNS Number=Plur _ _ _ _ 52 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 53 in in ADP IN _ _ _ _ _ 54 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 55 aberrant aberrant ADJ JJ Degree=Pos _ _ _ _ 56 expression expression NOUN NN Number=Sing _ _ _ _ 57 of of ADP IN _ _ _ _ _ 58 fasL fasL NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 8497 # text = Unstimulated MRL-lpr/lpr and C3H-gld/gld CD4(-)CD8(-) 1 Unstimulated Unstimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 MRL Mrl NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 lpr lpr NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 6 lpr lpr NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 C3H-gld/gld C3H-gld/gld PROPN NNP Number=Sing _ _ _ _ 9 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 (-) (-) PUNCT . _ _ _ _ SpaceAfter=No 11 CD8 CD8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 (-) (-) PUNCT . _ _ _ _ _ # sent_id = 8498 # text = T cells constitutively contained high levels of two proteins that bound to the FLRE. 1 T t NUM CD NumType=Card _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 constitutively constitutively ADV RB _ _ _ _ _ 4 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 high high ADJ JJ Degree=Pos _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 two two NUM CD NumType=Card _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 bound bound VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 FLRE Flre NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 8499 # text = Supershift analysis revealed these proteins to be Egr-1 and Egr-2 (Krox-20); Egr-3 was not detected. 1 Supershift Supershift VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 analysis analysis PRON DT Number=Sing|PronType=Dem _ _ _ _ 3 revealed reveale VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 -1 -1 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 -2 -2 NUM CD NumType=Card _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 Krox Krox NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 ; ; PUNCT , _ _ _ _ _ 19 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 -3 -3 NUM CD NumType=Card _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 8500 # text = Activation of normal lymph node cells resulted in increased expression of Egr-1, -2, and -3. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 normal normal ADJ JJ Degree=Pos _ _ _ _ 4 lymph lymph NOUN NN Number=Sing _ _ _ _ 5 node node NOUN NN Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 - - SYM SYM _ _ _ _ SpaceAfter=No 20 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 8501 # text = As with egr-3, expression of egr-2 was blocked by cyclosporin A. 1 As as ADP IN _ _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 egr egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 -3 -3 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 egr egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 -2 -2 NUM CD NumType=Card _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 14 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 8502 # text = Although overexpressed Egr-1 was ineffective, overexpressed Egr-2 was as potent as Egr-3 in inducing fasL promoter-dependent reporter constructs in T cell hybridomas and HeLa cells, and both up-regulated endogenous fasL mRNA in HeLa cells. 1 Although although SCONJ IN _ _ _ _ _ 2 overexpressed overexpress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 -1 -1 NUM CD NumType=Card _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 ineffective ineffective ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 overexpressed overexpress ADJ JJ Degree=Pos _ _ _ _ 9 Egr Egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 potent potent NOUN NN Number=Sing _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 -3 -3 NUM CD NumType=Card _ _ _ _ 18 in in SCONJ IN _ _ _ _ _ 19 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 20 fasL fasl ADJ JJ Degree=Pos _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 24 reporter reporter NOUN NN Number=Sing _ _ _ _ 25 constructs construct NOUN NNS Number=Plur _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 T t PROPN NNP Number=Sing _ _ _ _ 28 cell cell PROPN NNP Number=Sing _ _ _ _ 29 hybridomas hybridoma PROPN NNPS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 HeLa Hela PROPN NNP Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 both both ADV RB _ _ _ _ _ 36 up up ADV RB _ _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 40 fasL fasL PROPN NNP Number=Sing _ _ _ _ 41 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 8503 # text = FasL-dependent reporter constructs in MRL-lpr/lpr and C3H-gld/gld CD4(-)CD8(-) 1 FasL Fasl ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 4 reporter reporter NOUN NN Number=Sing _ _ _ _ 5 constructs construct NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 MRL MRL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 lpr/lpr lpr/lpr NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 C3H-gld/ C3H-gld/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 gld gld NOUN NN Number=Sing _ _ _ _ 13 CD4 Cd4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 (-) (-) PUNCT . _ _ _ _ SpaceAfter=No 15 CD8 CD8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 (-) (-) PUNCT . _ _ _ _ _ # sent_id = 8504 # text = T cells were constitutively active, and this activity was largely prevented by mutation of the critical Egr family binding element. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 constitutively constitutively ADV RB _ _ _ _ _ 5 active active ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 largely largely ADV RB _ _ _ _ _ 12 prevented prevent VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 mutation mutation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 critical critical ADJ JJ Degree=Pos _ _ _ _ 18 Egr Egr NOUN NN Number=Sing _ _ _ _ 19 family family NOUN NN Number=Sing _ _ _ _ 20 binding bind VERB VBG VerbForm=Ger _ _ _ _ 21 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 8505 # text = Thus, Egr-2, in addition to Egr-3, regulates FasL expression in activated normal T cells, and Egr-2 is likely to play a direct role in aberrant fasL up-regulation in lpr/lpr and gld/gld CD4(-)CD8(-) T cells. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 -2 -2 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 addition addition NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 -3 -3 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 FasL Fasl ADJ JJ Degree=Pos _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 normal normal ADJ JJ Degree=Pos _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 likely likely ADJ JJ Degree=Pos _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 play play VERB VB VerbForm=Inf _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 direct direct ADJ JJ Degree=Pos _ _ _ _ 31 role role NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 aberrant aberrant ADJ JJ Degree=Pos _ _ _ _ 34 fasL fasL NOUN NN Number=Sing _ _ _ _ 35 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 regulation regulation NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 lpr/lpr lpr/lpr NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 gld/gld gld/gld ADJ JJ Degree=Pos _ _ _ _ 42 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 (-) (-) PUNCT . _ _ _ _ SpaceAfter=No 44 CD8 CD8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 -) -) PUNCT . _ _ _ _ _ 47 T t PROPN NNP Number=Sing _ _ _ _ 48 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8506 # text = Document 0030011458 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011458 0030011458 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8507 # text = Human TAFII 105 is a cell type-specific TFIID subunit related to hTAFII130. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 TAFII TAFII NOUN NN Number=Sing _ _ _ _ 3 105 105 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 TFIID tFIId NOUN NN Number=Sing _ _ _ _ 11 subunit subunit NOUN NN Number=Sing _ _ _ _ 12 related related ADJ JJ Degree=Pos _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 hTAFII130 hTAFII130 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8508 # text = We previously characterized Drosophila and human TAF subunits that make up the core TFIID complex found in all cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 previously previously ADV RB _ _ _ _ _ 3 characterized characterize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 Drosophila Drosophila PROPN NNP Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 TAF Taf NOUN NN Number=Sing _ _ _ _ 8 subunits subunit NOUN NNS Number=Plur _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 make make VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 up up ADP RP _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 core core NOUN NN Number=Sing _ _ _ _ 14 TFIID tFIId NOUN NN Number=Sing _ _ _ _ 15 complex complex NOUN NN Number=Sing _ _ _ _ 16 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 all all DET DT _ _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 8509 # text = Here, we report that differentiated B cells contain a novel substoichiometric TAF of 105 kDa not found associated with TFIID isolated from other cell types. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 6 differentiated differentiate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 B b ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 contain contain VERB VB VerbForm=Inf _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 novel novel NOUN NN Number=Sing _ _ _ _ 12 substoichiometric substoichiometric ADJ JJ Degree=Pos _ _ _ _ 13 TAF Taf NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 105 105 NUM CD NumType=Card _ _ _ _ 16 kDa kDa PROPN NNP Number=Sing _ _ _ _ 17 not not PART RB _ _ _ _ _ 18 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 TFIID tFIId PROPN NNP Number=Sing _ _ _ _ 22 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 other other ADJ JJ Degree=Pos _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 8510 # text = The cDNA encoding hTAFII105 reveals a highly conserved C-terminal domain shared by hTAFII130 and oTAFII110, while the N-terminal coactivator domain has diverged significantly. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 3 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 4 hTAFII105 hTAFII105 NUM CD NumType=Card _ _ _ _ 5 reveals reveal NOUN NNS Number=Plur _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 highly highly ADV RB _ _ _ _ _ 8 conserved conserved ADJ JJ Degree=Pos _ _ _ _ 9 C- C- PUNCT , _ _ _ _ SpaceAfter=No 10 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 11 domain domain NOUN NN Number=Sing _ _ _ _ 12 shared share VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 hTAFII130 hTAFII130 PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 oTAFII110 oTAFII110 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 while while SCONJ IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 terminal terminal NOUN NN Number=Sing _ _ _ _ 22 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 23 domain domain NOUN NN Number=Sing _ _ _ _ 24 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 diverged diverge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 significantly significantly ADV RB _ _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 8511 # text = All cells tested express TAFII105 mRNA, but only B cells contain significant levels of protein associated with TFIID. 1 All all DET DT _ _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 express express ADJ JJ Degree=Pos _ _ _ _ 5 TAFII105 TAFII105 PROPN NNP Number=Sing _ _ _ _ 6 mRNA mRNa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 but but CCONJ CC _ _ _ _ _ 9 only only ADV RB _ _ _ _ _ 10 B b ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 significant significant ADJ JJ Degree=Pos _ _ _ _ 14 levels level NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 TFIID tFIId NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 8512 # text = Transient overexpression of hTAFII105 selectively squelches the transcription of some genes in B cells. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 hTAFII105 hTAFII105 PROPN NNP Number=Sing _ _ _ _ 5 selectively selectively ADV RB _ _ _ _ _ 6 squelches squelch VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 some some DET DT _ _ _ _ _ 11 genes gene NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 B b ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 8513 # text = These properties suggest that TAFII105 is a cell type-specific subunit of TFIID that may be responsible for mediating transcription by a subset of activators in B cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 properties property NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 TAFII105 TAFII105 PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 specific specific ADJ JJ Degree=Pos _ _ _ _ 12 subunit subunit NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 TFIID tFIId NOUN NN Number=Sing _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 may may AUX MD VerbForm=Fin _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 19 for for SCONJ IN _ _ _ _ _ 20 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 subset subset NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 activators activator NOUN NNS Number=Plur _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 B b ADJ JJ Degree=Pos _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8514 # text = Document 0030011461 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011461 0030011461 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8515 # text = CNI-1493 inhibits monocyte/macrophage tumor necrosis factor by suppression of translation efficiency. 1 CNI Cni PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1493 1493 NUM CD NumType=Card _ _ _ _ 4 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 5 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 / / PUNCT , _ _ _ _ SpaceAfter=No 7 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 8 tumor tumor NOUN NN Number=Sing _ _ _ _ 9 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 suppression suppression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 translation translation NOUN NN Number=Sing _ _ _ _ 15 efficiency efficiency NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8516 # text = Tumor necrosis factor (TNF) mediates a wide variety of disease states including septic shock, acute and chronic inflammation, and cachexia. 1 Tumor tumor ADP IN _ _ _ _ _ 2 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 wide wide ADJ JJ Degree=Pos _ _ _ _ 10 variety variety NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 disease disease NOUN NN Number=Sing _ _ _ _ 13 states state NOUN NNS Number=Plur _ _ _ _ 14 including include VERB VBG VerbForm=Ger _ _ _ _ 15 septic septic ADJ JJ Degree=Pos _ _ _ _ 16 shock shock NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 acute acute ADJ JJ Degree=Pos _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 21 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 cachexia cachexia NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8517 # text = Recently, a multivalent guanylhydrazone (CNI-1493) developed as an inhibitor of macrophage activation was shown to suppress TNF production and protect against tissue inflammation and endotoxin lethality [Bianchi, M., Ulrich, P., Bloom, O., Meistrell, M., Zimmerman, G.A., Schmidtmayerova, H., Bukrinsky, M., Donnelley, T., Bucala, R., Sherry, B., Manogue, K.R., Tortolani, A.J., Cerami, A.& Tracey, K.J.(1995) Mol.Med.1, 254-266, and Bianchi, M., Bloom, O., Raabe, T., Cohen, P. S., Chesney, J., Sherry, B., Schmidtmayerova, H., Zhang, X., Bukrinsky, M., Ulrich, P., Cerami, A.& Tracey, J.(1996) J.Exp.Med., in press]. 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 multivalent multivalent ADJ JJ Degree=Pos _ _ _ _ 5 guanylhydrazone guanylhydrazone NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 CNI Cni NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - SYM SYM _ _ _ _ SpaceAfter=No 9 1493 1493 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 developed develop VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 22 TNF TNF ADP RP _ _ _ _ _ 23 production production NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 protect protect VERB VB VerbForm=Inf _ _ _ _ 26 against against ADP IN _ _ _ _ _ 27 tissue tissue NOUN NN Number=Sing _ _ _ _ 28 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 endotoxin endotoxin NOUN NN Number=Sing _ _ _ _ 31 lethality lethality NOUN NN Number=Sing _ _ _ _ 32 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 Bianchi Bianchi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 M. M. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 Ulrich Ulrich PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 P. P. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 Bloom Bloom PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 O. O. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 Meistrell Meistrell PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 M. M. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 Zimmerman Zimmerman PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 , , PUNCT , _ _ _ _ _ 51 G. G. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 A. A. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 53 , , PUNCT , _ _ _ _ _ 54 Schmidtmayerova Schmidtmayerova PROPN NNP Number=Sing _ _ _ SpaceAfter=No 55 , , PUNCT , _ _ _ _ _ 56 H. H. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 57 , , PUNCT , _ _ _ _ _ 58 Bukrinsky Bukrinsky PROPN NNP Number=Sing _ _ _ SpaceAfter=No 59 , , PUNCT , _ _ _ _ _ 60 M. M. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 61 , , PUNCT , _ _ _ _ _ 62 Donnelley Donnelley PROPN NNP Number=Sing _ _ _ SpaceAfter=No 63 , , PUNCT , _ _ _ _ _ 64 T. T. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 65 , , PUNCT , _ _ _ _ _ 66 Bucala Bucala PROPN NNP Number=Sing _ _ _ SpaceAfter=No 67 , , PUNCT , _ _ _ _ _ 68 R. R. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 69 , , PUNCT , _ _ _ _ _ 70 Sherry Sherry PROPN NNP Number=Sing _ _ _ SpaceAfter=No 71 , , PUNCT , _ _ _ _ _ 72 B. B. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 73 , , PUNCT , _ _ _ _ _ 74 Manogue Manogue PROPN NNP Number=Sing _ _ _ SpaceAfter=No 75 , , PUNCT , _ _ _ _ _ 76 K.R. K.R. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 77 , , PUNCT , _ _ _ _ _ 78 Tortolani Tortolani PROPN NNP Number=Sing _ _ _ SpaceAfter=No 79 , , PUNCT , _ _ _ _ _ 80 A.J. A.J. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 81 , , PUNCT , _ _ _ _ _ 82 Cerami Cerami PROPN NNP Number=Sing _ _ _ SpaceAfter=No 83 , , PUNCT , _ _ _ _ _ 84 A. A. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 85 & & CCONJ CC _ _ _ _ _ 86 Tracey Tracey PROPN NNP Number=Sing _ _ _ SpaceAfter=No 87 , , PUNCT , _ _ _ _ _ 88 K.J. K.J. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 89 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 90 1995 1995 NUM CD NumType=Card _ _ _ SpaceAfter=No 91 ) ) PUNCT -RRB- _ _ _ _ _ 92 Mol.Med Mol.Med VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 93 .1 .1 NUM CD NumType=Card _ _ _ SpaceAfter=No 94 , , PUNCT , _ _ _ _ _ 95 254 254 NUM CD NumType=Card _ _ _ SpaceAfter=No 96 - - SYM SYM _ _ _ _ SpaceAfter=No 97 266 266 NUM CD NumType=Card _ _ _ SpaceAfter=No 98 , , PUNCT , _ _ _ _ _ 99 and and CCONJ CC _ _ _ _ _ 100 Bianchi Bianchi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 101 , , PUNCT , _ _ _ _ _ 102 M. M. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 103 , , PUNCT , _ _ _ _ _ 104 Bloom Bloom PROPN NNP Number=Sing _ _ _ SpaceAfter=No 105 , , PUNCT , _ _ _ _ _ 106 O. O. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 107 , , PUNCT , _ _ _ _ _ 108 Raabe Raabe PROPN NNP Number=Sing _ _ _ SpaceAfter=No 109 , , PUNCT , _ _ _ _ _ 110 T. T. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 111 , , PUNCT , _ _ _ _ _ 112 Cohen Cohen PROPN NNP Number=Sing _ _ _ SpaceAfter=No 113 , , PUNCT , _ _ _ _ _ 114 P. P. PROPN NNP Number=Sing _ _ _ _ 115 S. S. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 116 , , PUNCT , _ _ _ _ _ 117 Chesney Chesney PROPN NNP Number=Sing _ _ _ SpaceAfter=No 118 , , PUNCT , _ _ _ _ _ 119 J. j. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 120 , , PUNCT , _ _ _ _ _ 121 Sherry Sherry PROPN NNP Number=Sing _ _ _ SpaceAfter=No 122 , , PUNCT , _ _ _ _ _ 123 B. B. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 124 , , PUNCT , _ _ _ _ _ 125 Schmidtmayerova Schmidtmayerova PROPN NNP Number=Sing _ _ _ SpaceAfter=No 126 , , PUNCT , _ _ _ _ _ 127 H. H. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 128 , , PUNCT , _ _ _ _ _ 129 Zhang Zhang PROPN NNP Number=Sing _ _ _ SpaceAfter=No 130 , , PUNCT , _ _ _ _ _ 131 X. X. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 132 , , PUNCT , _ _ _ _ _ 133 Bukrinsky Bukrinsky PROPN NNP Number=Sing _ _ _ SpaceAfter=No 134 , , PUNCT , _ _ _ _ _ 135 M. M. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 136 , , PUNCT , _ _ _ _ _ 137 Ulrich Ulrich PROPN NNP Number=Sing _ _ _ SpaceAfter=No 138 , , PUNCT , _ _ _ _ _ 139 P. P. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 140 , , PUNCT , _ _ _ _ _ 141 Cerami Cerami PROPN NNP Number=Sing _ _ _ SpaceAfter=No 142 , , PUNCT , _ _ _ _ _ 143 A. A. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 144 & & CCONJ CC _ _ _ _ _ 145 Tracey Tracey PROPN NNP Number=Sing _ _ _ SpaceAfter=No 146 , , PUNCT , _ _ _ _ _ 147 J. j. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 148 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 149 1996 1996 NUM CD NumType=Card _ _ _ SpaceAfter=No 150 ) ) PUNCT -RRB- _ _ _ _ _ 151 J.Exp.Med J.Exp.Med PROPN NNP Number=Sing _ _ _ SpaceAfter=No 152 . . PUNCT . _ _ _ _ SpaceAfter=No 153 , , PUNCT , _ _ _ _ _ 154 in in ADP IN _ _ _ _ _ 155 press press NOUN NN Number=Sing _ _ _ SpaceAfter=No 156 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 157 . . PUNCT . _ _ _ _ _ # sent_id = 8518 # text = We have now elucidated the mechanism by which CNI-1493 inhibits macrophage TNF synthesis and show here that it acts through suppression of TNF translation efficiency. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 now now ADV RB _ _ _ _ _ 4 elucidated elucidate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 CNI CNI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - SYM SYM _ _ _ _ SpaceAfter=No 11 1493 1493 NUM CD NumType=Card _ _ _ _ 12 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 13 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 14 TNF TNF PROPN NNP Number=Sing _ _ _ _ 15 synthesis synthesis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 show show VERB VB VerbForm=Inf _ _ _ _ 18 here here ADV RB PronType=Dem _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 21 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 through through ADP IN _ _ _ _ _ 23 suppression suppression NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 TNF Tnf NOUN NN Number=Sing _ _ _ _ 26 translation translation NOUN NN Number=Sing _ _ _ _ 27 efficiency efficiency NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 8519 # text = CNI-1493 blocked neither the lipopolysaccharide (LPS)-induced increases in the expression of TNF mRNA nor the translocation of nuclear factor NF-kappa B to the nucleus in macrophages activated by 15 min of LPS stimulation, indicating that CNI-1493 does not interfere with early NF-kappa B-mediated transcriptional regulation of TNF. 1 CNI CNI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1493 1493 NUM CD NumType=Card _ _ _ _ 4 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 neither neither CCONJ CC _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 increases increase NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 TNF TNF PROPN NNP Number=Sing _ _ _ _ 19 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 20 nor nor CCONJ CC _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 translocation translocation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 35 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 15 15 NUM CD NumType=Card _ _ _ _ 38 min min NOUN NNS Number=Plur _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 LPS Lps PROPN NNP Number=Sing _ _ _ _ 41 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 44 that that SCONJ IN _ _ _ _ _ 45 CNI CNI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - SYM SYM _ _ _ _ SpaceAfter=No 47 1493 1493 NUM CD NumType=Card _ _ _ _ 48 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 49 not not PART RB _ _ _ _ _ 50 interfere interfere VERB VB VerbForm=Inf _ _ _ _ 51 with with ADP IN _ _ _ _ _ 52 early early ADJ JJ Degree=Pos _ _ _ _ 53 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 kappa kappa NOUN NN Number=Sing _ _ _ _ 56 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 59 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 60 regulation regulation NOUN NN Number=Sing _ _ _ _ 61 of of ADP IN _ _ _ _ _ 62 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 63 . . PUNCT . _ _ _ _ _ # sent_id = 8520 # text = However, synthesis of the 26-kDa membrane form of TNF was effectively blocked by CNI-1493. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 26 26 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kDa kDa NOUN NN Number=Sing _ _ _ _ 9 membrane membrane NOUN NN Number=Sing _ _ _ _ 10 form form NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 TNF TNF PROPN NNP Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 effectively effectively ADV RB _ _ _ _ _ 15 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 CNI CNI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 -1493 -1493 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 8521 # text = Further evidence for the translational suppression of TNF is given by experiments using chloram-phenicol acetyltransferase (CAT) constructs containing elements of the TNF gene that are involved in TNF translational regulation. 1 Further further ADJ JJ Degree=Pos _ _ _ _ 2 evidence evidence NOUN NN Number=Sing _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 translational translational ADJ JJ Degree=Pos _ _ _ _ 6 suppression suppression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 TNF TNF PROPN NNP Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 given give VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 experiments experiment NOUN NNS Number=Plur _ _ _ _ 13 using use VERB VBG VerbForm=Ger _ _ _ _ 14 chloram chloram NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 phenicol phenicol NOUN NN Number=Sing _ _ _ _ 17 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 CAT cat NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 constructs construct NOUN NNS Number=Plur _ _ _ _ 22 containing contain VERB VBG VerbForm=Ger _ _ _ _ 23 elements element NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 TNF TNF PROPN NNP Number=Sing _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 that that PRON WDT PronType=Rel _ _ _ _ 29 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 involved involved ADJ JJ Degree=Pos _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 TNF TNF PROPN NNP Number=Sing _ _ _ _ 33 translational translational ADJ JJ Degree=Pos _ _ _ _ 34 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 8522 # text = Both the 5' and 3' untranslated regions of the TNF gene were required to elicit maximal translational suppression by CNI-1493. 1 Both both CCONJ CC _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 ' ' NOUN NNS Number=Plur _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 3 3 X LS _ _ _ _ SpaceAfter=No 7 ' ' PUNCT `` _ _ _ _ _ 8 untranslated untranslated ADJ JJ Degree=Pos _ _ _ _ 9 regions region NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 TNF TNF PROPN NNP Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 elicit elicit VERB VB VerbForm=Inf _ _ _ _ 18 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 19 translational translational ADJ JJ Degree=Pos _ _ _ _ 20 suppression suppression NOUN NN Number=Sing _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 CNI CNI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 -1493 -1493 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 8523 # text = Identification of the molecular target through which CNI- 1493 inhibits TNF translation should provide insight into the regulation of macrophage activation and mechanisms of inflammation. 1 Identification identification NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 5 target target NOUN NN Number=Sing _ _ _ _ 6 through through ADP IN _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 CNI CNI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - SYM SYM _ _ _ _ _ 10 1493 1493 NUM CD NumType=Card _ _ _ _ 11 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 12 TNF Tnf ADP IN _ _ _ _ _ 13 translation translation NOUN NN Number=Sing _ _ _ _ 14 should should AUX MD VerbForm=Fin _ _ _ _ 15 provide provide VERB VB VerbForm=Inf _ _ _ _ 16 insight insight ADV RB _ _ _ _ _ 17 into into ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 regulation regulation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8524 # text = Document 0030011465 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011465 0030011465 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8525 # text = Cortivazol mediated induction of glucocorticoid receptor messenger ribonucleic acid in wild-type and dexamethasone-resistant human leukemic (CEM) cells. 1 Cortivazol Cortivazol PROPN NNP Number=Sing _ _ _ _ 2 mediated mediate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 induction induction NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 messenger messenger ADV RBR _ _ _ _ _ 8 ribonucleic ribonucleic ADJ JJ Degree=Pos _ _ _ _ 9 acid acid NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 type type NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 resistant resistant NOUN NN Number=Sing _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 leukemic leukemic NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 CEM CEM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8526 # text = Cortivazol is a phenylpyrazolo glucocorticoid of high potency and unusual structure. 1 Cortivazol Cortivazol PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 phenylpyrazolo phenylpyrazolo NOUN NN Number=Sing _ _ _ _ 5 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 high high ADJ JJ Degree=Pos _ _ _ _ 8 potency potency NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 unusual unusual ADJ JJ Degree=Pos _ _ _ _ 11 structure structure NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 8527 # text = In both wild-type and highly dexamethasone(dex)-resistant clones of the human leukemic cell line CEM, exposure to cortivazol leads to cell death. 1 In in ADP IN _ _ _ _ _ 2 both both DET DT _ _ _ _ _ 3 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 type type NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 highly highly ADV RB _ _ _ _ _ 8 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 dex dex NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 - - PUNCT : _ _ _ _ SpaceAfter=No 13 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 14 clones clone NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 line line NOUN NN Number=Sing _ _ _ _ 21 CEM CEM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 exposure exposure NOUN NN Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 cortivazol cortivazol VERB VB VerbForm=Inf _ _ _ _ 26 leads lead NOUN NNS Number=Plur _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 cell cell VERB VB VerbForm=Inf _ _ _ _ 29 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 8528 # text = It has been shown recently that in wild-type CEM cells but not in a dex-resistant, glucocorticoid receptor(GR)-defective clone ICR-27 TK-3, dex induces GR mRNA. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 recently recently ADV RB _ _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 type type NOUN NN Number=Sing _ _ _ _ 11 CEM CEM PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 dex dex NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 -resistant -resistant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 GR GR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 defective defective ADJ JJ Degree=Pos _ _ _ _ 27 clone clone NOUN NN Number=Sing _ _ _ _ 28 ICR Icr NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 27 27 NUM CD NumType=Card _ _ _ _ 31 TK TK NUM CD NumType=Card _ _ _ SpaceAfter=No 32 - - SYM SYM _ _ _ _ SpaceAfter=No 33 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 dex dex NOUN NN Number=Sing _ _ _ _ 36 induces induce NOUN NNS Number=Plur _ _ _ _ 37 GR GR PROPN NNP Number=Sing _ _ _ _ 38 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 8529 # text = To test the hypothesis that cortivazol acts in dex-resistant cells by making use of the residual GR found there, wild-type and dex-resistant clones were treated with various concentrations of cortivazol and induction of GR mRNA was studied. 1 To to PART TO _ _ _ _ _ 2 test test VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 cortivazol cortivazol ADJ JJ Degree=Pos _ _ _ _ 7 acts act NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 dex-resistant dex-resistant ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 by by SCONJ IN _ _ _ _ _ 12 making make VERB VBG VerbForm=Ger _ _ _ _ 13 use use NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 residual residual ADJ JJ Degree=Pos _ _ _ _ 17 GR Gr NOUN NN Number=Sing _ _ _ _ 18 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 there there ADV RB PronType=Dem _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 type type NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 dex-resistant dex-resistant ADJ JJ Degree=Pos _ _ _ _ 26 clones clone NOUN NNS Number=Plur _ _ _ _ 27 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 treated treat VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 various various ADJ JJ Degree=Pos _ _ _ _ 31 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 cortivazol cortivazol NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 induction induction NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 GR GR PROPN NNP Number=Sing _ _ _ _ 38 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 39 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 40 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 8530 # text = Cortivazol significantly induced GR mRNA in the normal CEM-C7 as well as in two classes of dex-resistant clones, although the dex-resistant clones needed at least 10 times more cortivazol than the normal cells for significant GR mRNA induction. 1 Cortivazol Cortivazol PROPN NNP Number=Sing _ _ _ _ 2 significantly significantly ADV RB _ _ _ _ _ 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 GR Gr PROPN NNP Number=Sing _ _ _ _ 5 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 normal normal ADJ JJ Degree=Pos _ _ _ _ 9 CEM cem PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 C7 C7 NOUN NN Number=Sing _ _ _ _ 12 as as ADV RB _ _ _ _ _ 13 well well ADV RB Degree=Pos _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 two two NUM CD NumType=Card _ _ _ _ 17 classes class NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 dex-resistant dex-resistant ADJ JJ Degree=Pos _ _ _ _ 20 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 although although SCONJ IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 dex-resistant dex-resistant ADJ JJ Degree=Pos _ _ _ _ 25 clones clone NOUN NNS Number=Plur _ _ _ _ 26 needed need VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 at at ADV RB _ _ _ _ _ 28 least least ADV RBS Degree=Sup _ _ _ _ 29 10 10 NUM CD NumType=Card _ _ _ _ 30 times time NOUN NNS Number=Plur _ _ _ _ 31 more more ADJ JJR Degree=Cmp _ _ _ _ 32 cortivazol cortivazol NOUN NN Number=Sing _ _ _ _ 33 than than ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 normal normal ADJ JJ Degree=Pos _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 significant significant ADJ JJ Degree=Pos _ _ _ _ 39 GR GR PROPN NNP Number=Sing _ _ _ _ 40 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 41 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 8531 # text = Increased levels of GR mRNA were noticed as early as 3 h after treatment. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 GR GR PROPN NNP Number=Sing _ _ _ _ 5 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 noticed notice VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 as as ADV RB _ _ _ _ _ 9 early early ADV RB Degree=Pos _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 3 3 NUM CD NumType=Card _ _ _ _ 12 h h NOUN NN Number=Sing _ _ _ _ 13 after after ADP IN _ _ _ _ _ 14 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 8532 # text = A general correlation between induction of GR mRNA and lysis of the normal and dex-resistant cells was found. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 general general ADJ JJ Degree=Pos _ _ _ _ 3 correlation correlation NOUN NN Number=Sing _ _ _ _ 4 between between ADP IN _ _ _ _ _ 5 induction induction NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 GR GR PROPN NNP Number=Sing _ _ _ _ 8 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 lysis lysis NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 normal normal ADJ JJ Degree=Pos _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 dex dex ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 8533 # text = Positive induction of GR mRNA might be one of the earliest crucial steps in the lysis of normal and dex-resistant CEM cells, or might serve as a marker for the process. 1 Positive positive ADJ JJ Degree=Pos _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 GR GR PROPN NNP Number=Sing _ _ _ _ 5 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 6 might might AUX MD VerbForm=Fin _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 one one NUM CD NumType=Card _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 earliest earliest ADJ JJS Degree=Sup _ _ _ _ 12 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 13 steps step NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 lysis lysis NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 normal normal ADJ JJ Degree=Pos _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 dex-resistant dex-resistant ADJ JJ Degree=Pos _ _ _ _ 21 CEM CEM PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 might might AUX MD VerbForm=Fin _ _ _ _ 26 serve serve VERB VB VerbForm=Inf _ _ _ _ 27 as as ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 marker marker NOUN NN Number=Sing _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 process process NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 8534 # text = However, the lysis pathway in the dex-resistant cells is defective in that dex-resistant clones needed significantly more cortivazol than the normal cells for lysis of the cells. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 lysis lysis NOUN NN Number=Sing _ _ _ _ 5 pathway pathway NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 dex- dex- SYM NFP _ _ _ _ SpaceAfter=No 9 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 defective defective ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 15 dex- dex- SYM NFP _ _ _ _ SpaceAfter=No 16 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 17 clones clone NOUN NNS Number=Plur _ _ _ _ 18 needed need VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 significantly significantly ADV RB _ _ _ _ _ 20 more more ADV RBR _ _ _ _ _ 21 cortivazol cortivazol ADJ JJ Degree=Pos _ _ _ _ 22 than than ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 normal normal ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 lysis lysis NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8535 # text = Document 0030011473 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011473 0030011473 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8536 # text = Expression of PILOT, a putative transcription factor, requires two signals and is cyclosporin A sensitive in T cells. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 PILOT Pilot PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 putative putative ADJ JJ Degree=Pos _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 two two NUM CD NumType=Card _ _ _ _ 12 signals signal NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 cyclosporin cyclosporin VERB VB VerbForm=Inf _ _ _ _ 16 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 sensitive sensitive NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8537 # text = Few known genes (IL-2, members of the IL-8 family, interferon-gamma) are induced in T cells only through the combined effect of phorbol myristic acetate (PMA) and a Ca(2+)-ionophore, and expression of only these genes can be fully suppressed by Cyclosporin A (CyA). 1 Few few ADJ JJ Degree=Pos _ _ _ _ 2 known know ADJ JJ Degree=Pos _ _ _ _ 3 genes gene NOUN NNS Number=Plur _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 members member NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 8 8 NUM CD NumType=Card _ _ _ _ 15 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 only only ADV RB _ _ _ _ _ 27 through through ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 effect effect NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 33 myristic myristic ADJ JJ Degree=Pos _ _ _ _ 34 acetate acetate NOUN NN Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 Ca ca NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 +) +) SYM NFP _ _ _ _ SpaceAfter=No 44 - - SYM SYM _ _ _ _ SpaceAfter=No 45 ionophore ionophore ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 expression expression NOUN NN Number=Sing _ _ _ _ 49 of of ADP IN _ _ _ _ _ 50 only only ADV RB _ _ _ _ _ 51 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 52 genes gene NOUN NNS Number=Plur _ _ _ _ 53 can can AUX MD VerbForm=Fin _ _ _ _ 54 be be AUX VB VerbForm=Inf _ _ _ _ 55 fully fully ADV RB _ _ _ _ _ 56 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 57 by by ADP IN _ _ _ _ _ 58 Cyclosporin Cyclosporin PROPN NNP Number=Sing _ _ _ _ 59 A A PROPN NNP Number=Sing _ _ _ _ 60 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 61 CyA CyA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 62 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 63 . . PUNCT . _ _ _ _ _ # sent_id = 8538 # text = We have identified a putative transcription factor, designated PILOT, with an identical dual signal requirement for expression. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 putative putative ADJ JJ Degree=Pos _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 PILOT Pilot NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 identical identical ADJ JJ Degree=Pos _ _ _ _ 15 dual dual ADJ JJ Degree=Pos _ _ _ _ 16 signal signal NOUN NN Number=Sing _ _ _ _ 17 requirement requirement NOUN NN Number=Sing _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 8539 # text = Induction of the PILOT gene is detectable in human T cells 20 min following activation in the presence of cycloheximide and is fully suppressed by CyA. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 PI PI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 LOT lot NOUN NN Number=Sing _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 20 20 NUM CD NumType=Card _ _ _ _ 14 min min NOUN NNS Number=Plur _ _ _ _ 15 following follow VERB VBG VerbForm=Ger _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 presence presence NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 fully fully ADV RB _ _ _ _ _ 25 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 CyA CyA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 8540 # text = The PILOT protein has a calculated M(r) of 42.6 kDa and contains three zinc fingers of the C2H2-type at the carboxyl-terminus which are highly homologous to the zinc finger regions of the transcription factors EGR1, EGR2, and pAT 133. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 PI pi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 LOT Lot NOUN NN Number=Sing _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 calculated calculate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 r be NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 42.6 42.6 NUM CD NumType=Card _ _ _ _ 14 kDa kDa PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 three three NUM CD NumType=Card _ _ _ _ 18 zinc zinc NOUN NN Number=Sing _ _ _ _ 19 fingers finger NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 C2 C2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 H2 H2 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT : _ _ _ _ SpaceAfter=No 25 type type NOUN NN Number=Sing _ _ _ _ 26 at at ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 carboxyl carboxyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 terminus terminus NOUN NN Number=Sing _ _ _ _ 31 which which PRON WDT PronType=Rel _ _ _ _ 32 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 highly highly ADV RB _ _ _ _ _ 34 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 zinc zinc NOUN NN Number=Sing _ _ _ _ 38 finger finger NOUN NN Number=Sing _ _ _ _ 39 regions region NOUN NNS Number=Plur _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 transcription transcription NOUN NN Number=Sing _ _ _ _ 43 factors factor NOUN NNS Number=Plur _ _ _ _ 44 EGR1 EGR1 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 EGR2 EGR2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 pAT pAT NOUN NN Number=Sing _ _ _ _ 50 133 133 NUM CD NumType=Card _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 8541 # text = In contrast to T cells, in fibroblasts PILOT gene expression requires only one signal (PMA) and is not affected by CyA. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 9 PI PI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 LOT LOT PROPN NNP Number=Sing _ _ _ _ 11 gene gene ADJ JJ Degree=Pos _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 only only ADV RB _ _ _ _ _ 15 one one NUM CD NumType=Card _ _ _ _ 16 signal signal NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 CyA CyA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 8542 # text = This observation directly demonstrates the existence of a Ca2+ signal-dependent regulatory element obligatory for expression of some genes in T cells but not in fibroblasts. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 observation observation NOUN NN Number=Sing _ _ _ _ 3 directly directly ADV RB _ _ _ _ _ 4 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 existence existence NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 Ca2 Ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 + + SYM SYM _ _ _ _ _ 11 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 -dependent -dependent ADJ JJ Degree=Pos _ _ _ _ 13 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 14 element element NOUN NN Number=Sing _ _ _ _ 15 obligatory obligatory NOUN NN Number=Sing _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 some some DET DT _ _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 but but CCONJ CC _ _ _ _ _ 25 not not PART RB _ _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 8543 # text = This differential expression model will be valuable in the dissection of the dual signal pathway in T cells and the effects of CyA upon it. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 differential differential ADJ JJ Degree=Pos _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 model model NOUN NN Number=Sing _ _ _ _ 5 will will AUX MD VerbForm=Fin _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 valuable valuable ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 dissection dissection NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 dual dual ADJ JJ Degree=Pos _ _ _ _ 14 signal signal NOUN NN Number=Sing _ _ _ _ 15 pathway pathway NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 T T PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 effects effect NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 CyA CyA PROPN NNP Number=Sing _ _ _ _ 24 upon upon ADP IN _ _ _ _ _ 25 it it PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8544 # text = Document 0030011481 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011481 0030011481 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8545 # text = Expression and genomic configuration of GM-CSF, IL-3, M-CSF receptor (C-FMS), early growth response gene-1 (EGR-1) and M-CSF genes in primary myelodysplastic syndromes. 1 Expression expression PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 4 configuration configuration NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 CSF Csf NOUN NN Number=Sing _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 C- C- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 FMS FMS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 early early ADJ JJ Degree=Pos _ _ _ _ 24 growth growth NOUN NN Number=Sing _ _ _ _ 25 response response NOUN NN Number=Sing _ _ _ _ 26 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT : _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 EGR EGR NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1 1 X LS _ _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 CSF Csf NOUN NN Number=Sing _ _ _ _ 38 genes gene NOUN NNS Number=Plur _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 primary primary ADJ JJ Degree=Pos _ _ _ _ 41 myelodysplastic myelodysplastic ADJ JJ Degree=Pos _ _ _ _ 42 syndromes syndrome NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8546 # text = Peripheral blood mononuclear cells from seventeen patients with primary myelodysplastic syndromes (MDS) in advanced stage were enriched for blasts and tested for (1) karyotype, (2) genomic configuration and (3) expression of IL-3, GM-CSF, FMS and EGR-1 genes which are all located on the long arm of chromosome 5. 1 Peripheral Peripheral ADJ JJ Degree=Pos _ _ _ _ 2 blood blood NOUN NN Number=Sing _ _ _ _ 3 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 seventeen seventeen NUM CD NumType=Card _ _ _ _ 7 patients patient NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 primary primary ADJ JJ Degree=Pos _ _ _ _ 10 myelodysplastic myelodysplastic ADJ JJ Degree=Pos _ _ _ _ 11 syndromes syndrome NOUN NNS Number=Plur _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 MDS MDS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 advanced advanced ADJ JJ Degree=Pos _ _ _ _ 17 stage stage NOUN NN Number=Sing _ _ _ _ 18 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 enriched enrich VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 blasts blast NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 1 1 X LS _ _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 karyotype karyotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 2 2 X LS _ _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 34 configuration configuration NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 3 3 X LS _ _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 expression expression NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT , _ _ _ _ SpaceAfter=No 43 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 FMS FMS PROPN NNP Number=Sing _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 EGR EGR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT , _ _ _ _ SpaceAfter=No 53 1 1 NUM CD NumType=Card _ _ _ _ 54 genes gene NOUN NNS Number=Plur _ _ _ _ 55 which which PRON WDT PronType=Rel _ _ _ _ 56 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 57 all all ADV RB _ _ _ _ _ 58 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 59 on on ADP IN _ _ _ _ _ 60 the the DET DT Definite=Def|PronType=Art _ _ _ _ 61 long long ADJ JJ Degree=Pos _ _ _ _ 62 arm arm NOUN NN Number=Sing _ _ _ _ 63 of of ADP IN _ _ _ _ _ 64 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 65 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 66 . . PUNCT . _ _ _ _ _ # sent_id = 8547 # text = The expression of the M-CSF gene, that has been recently reassigned to the short arm of chromosome 1 (lp), was also investigated. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 CSF Csf NOUN NN Number=Sing _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 11 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 13 recently recently ADV RB _ _ _ _ _ 14 reassigned reassign VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 short short ADJ JJ Degree=Pos _ _ _ _ 18 arm arm NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 21 1 1 NUM CD NumType=Card _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 lp lp NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 also also ADV RB _ _ _ _ _ 28 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 8548 # text = Aims of the study were to (1) assess the potential role of the expression of these genes in the maintenance and expansion of the neoplastic clones and (2) search for constitutional losses or rearrangements of one allele followed by a deletion of the second allele of the same genes in the leukemic cells. 1 Aims aim NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 1 1 X LS _ _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 assess assess VERB VB VerbForm=Inf _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 potential potential ADJ JJ Degree=Pos _ _ _ _ 13 role role NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 19 genes gene NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 maintenance maintenance NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 expansion expansion NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 neoplastic neoplastic ADJ JJ Degree=Pos _ _ _ _ 28 clones clone NOUN NNS Number=Plur _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 2 2 X LS _ _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 search search NOUN NN Number=Sing _ _ _ _ 34 for for ADP IN _ _ _ _ _ 35 constitutional constitutional ADJ JJ Degree=Pos _ _ _ _ 36 losses loss NOUN NNS Number=Plur _ _ _ _ 37 or or CCONJ CC _ _ _ _ _ 38 rearrangements rearrangement NOUN NNS Number=Plur _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 one one NUM CD NumType=Card _ _ _ _ 41 allele allele NOUN NN Number=Sing _ _ _ _ 42 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 by by ADP IN _ _ _ _ _ 44 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 45 deletion deletion NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 49 allele allele NOUN NN Number=Sing _ _ _ _ 50 of of ADP IN _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 same same ADJ JJ Degree=Pos _ _ _ _ 53 genes gene NOUN NNS Number=Plur _ _ _ _ 54 in in ADP IN _ _ _ _ _ 55 the the DET DT Definite=Def|PronType=Art _ _ _ _ 56 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 57 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 8549 # text = The latter issue was investigated by comparing, in 8 cases, constitutive DNA from skin fibroblasts with leukemic DNA. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 latter latter ADJ JJ Degree=Pos _ _ _ _ 3 issue issue NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 comparing comparing NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 8 8 NUM CD NumType=Card _ _ _ _ 11 cases case NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 14 DNA dna NOUN NN Number=Sing _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 skin skin NOUN NN Number=Sing _ _ _ _ 17 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 20 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 8550 # text = Eleven of the 17 patients had abnormal karyotypes. 1 Eleven eleven PROPN NNP Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 17 17 NUM CD NumType=Card _ _ _ _ 5 patients patient NOUN NNS Number=Plur _ _ _ _ 6 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 abnormal abnormal ADJ JJ Degree=Pos _ _ _ _ 8 karyotypes karyotype NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 8551 # text = The M-CSF gene was expressed in 6 cases and the FMS and the EGR-1 genes were expressed in 2 of the latter cases. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 CSF Csf NOUN NN Number=Sing _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 6 6 NUM CD NumType=Card _ _ _ _ 10 cases case NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 FMS Fm NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 EGR Egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 genes gene NOUN NNS Number=Plur _ _ _ _ 20 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 2 2 NUM CD NumType=Card _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 latter latter ADJ JJ Degree=Pos _ _ _ _ 27 cases case NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 8552 # text = An autocrine mechanism of growth could be hypothesized only for the 2 patients whose cells expressed both the M-CSF and FMS genes. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 autocrine autocrine NOUN NN Number=Sing _ _ _ _ 3 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 growth growth NOUN NN Number=Sing _ _ _ _ 6 could could AUX MD VerbForm=Fin _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 hypothesized hypothesize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 only only ADV RB _ _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 2 2 NUM CD NumType=Card _ _ _ _ 13 patients patient NOUN NNS Number=Plur _ _ _ _ 14 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 both both CCONJ CC _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 CSF CSF NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 FMS FMS ADJ JJ Degree=Pos _ _ _ _ 24 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8553 # text = No germline changes or rearrangements were observed in any of the genes studied. 1 No no DET DT _ _ _ _ _ 2 germline germline NOUN NN Number=Sing _ _ _ _ 3 changes change NOUN NNS Number=Plur _ _ _ _ 4 or or CCONJ CC _ _ _ _ _ 5 rearrangements rearrangement NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 any any DET DT _ _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 genes gene NOUN NNS Number=Plur _ _ _ _ 13 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 8554 # text = Thus, deregulation of genes encoding for certain hemopoietic growth factors or receptors does not seem to represent a major mechanism of MDS progression. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 deregulation deregulation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 genes gene NOUN NNS Number=Plur _ _ _ _ 6 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 certain certain ADJ JJ Degree=Pos _ _ _ _ 9 hemopoietic hemopoietic ADJ JJ Degree=Pos _ _ _ _ 10 growth growth NOUN NN Number=Sing _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 receptors receptor NOUN NNS Number=Plur _ _ _ _ 14 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 seem seem VERB VB VerbForm=Inf _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 represent represent VERB VB VerbForm=Inf _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 major major ADJ JJ Degree=Pos _ _ _ _ 21 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 MDS mds NOUN NN Number=Sing _ _ _ _ 24 progression progression NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8555 # text = Document 0030011488 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011488 0030011488 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8556 # text = Tax-independent binding of multiple cellular factors to Tax-response element DNA of HTLV-I. 1 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 independent independent ADJ JJ Degree=Pos _ _ _ _ 4 binding binding NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 7 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 Tax tax PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 response response NOUN NN Number=Sing _ _ _ _ 13 element element NOUN NN Number=Sing _ _ _ _ 14 DNA dna NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8557 # text = The human T-cell leukemia virus type I (HTLV-I) promoter contains three copies of imperfect repeats of a 21-base pair sequence designated here as TRE (Tax-response element) that is responsive to the virally encoded transactivator protein Tax. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 type type NOUN NN Number=Sing _ _ _ _ 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 promoter promoter VERB VB VerbForm=Inf _ _ _ _ 15 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 three three NUM CD NumType=Card _ _ _ _ 17 copies copy NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 imperfect imperfect ADJ JJ Degree=Pos _ _ _ _ 20 repeats repeat NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 21 21 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 base base NOUN NN Number=Sing _ _ _ _ 26 pair pair NOUN NN Number=Sing _ _ _ _ 27 sequence sequence NOUN NN Number=Sing _ _ _ _ 28 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 here here ADV RB PronType=Dem _ _ _ _ 30 as as ADP IN _ _ _ _ _ 31 TRE tre PROPN NNP Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 response response NOUN NN Number=Sing _ _ _ _ 36 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 that that PRON WDT PronType=Rel _ _ _ _ 39 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 40 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 41 to to ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 virally virally ADV RB _ _ _ _ _ 44 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 46 protein protein NOUN NN Number=Sing _ _ _ _ 47 Tax Tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 8558 # text = We have identified and separated four nuclear proteins from C81-66-45 cells, an HTLV-I immortalized Tax-expressing human T-lymphocyte line (Salahuddin et al., 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 separated separate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 four four NUM CD NumType=Card _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 proteins protein NOUN NNS Number=Plur _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 C81-66 c81-66 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 -45 -45 NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 immortalized immortalize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 25 line line NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 Salahuddin Salahuddin PROPN NNP Number=Sing _ _ _ _ 28 et et X FW _ _ _ _ _ 29 al. al. X FW _ _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ # sent_id = 8559 # text = 1983), that interact with the TRE-DNA, none of which are identical with the Tax-protein. 1 1983 1983 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 interact interact NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 TRE Tre NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 none none NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 identical identical ADJ JJ Degree=Pos _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 8560 # text = The proteins identified have molecular weights of about 32, 36 to 42, 50 and 110 kD. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 proteins protein NOUN NNS Number=Plur _ _ _ _ 3 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 6 weights weight NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 about about ADP IN _ _ _ _ _ 9 32 32 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 36 36 NUM CD NumType=Card _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 42 42 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 50 50 NUM CD NumType=Card _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 110 110 NUM CD NumType=Card _ _ _ _ 18 kD kD NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 8561 # text = Four different methods were used to identify the proteins. 1 Four four NUM CD NumType=Card _ _ _ _ 2 different different ADJ JJ Degree=Pos _ _ _ _ 3 methods method NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 identify identify VERB VB VerbForm=Inf _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 8562 # text = First, from different cell lines three or all four of the nuclear proteins were specifically cross-linked by UV irradiation to the radioactively labeled TRE-DNA fragment. 1 First first ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 different different ADJ JJ Degree=Pos _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 lines line NOUN NNS Number=Plur _ _ _ _ 7 three three NUM CD NumType=Card _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 all all DET DT _ _ _ _ _ 10 four four NUM CD NumType=Card _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 proteins protein NOUN NNS Number=Plur _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 specifically specifically ADV RB _ _ _ _ _ 17 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 -linked -link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 UV UV PROPN NNP Number=Sing _ _ _ _ 21 irradiation irradiation NOUN NN Number=Sing _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 radioactively radioactively ADV RB Degree=Pos _ _ _ _ 25 labeled label VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 TRE Tre NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 DNA Dna NOUN NN Number=Sing _ _ _ _ 29 fragment fragment NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 8563 # text = Second, TRE-DNA binding proteins sedimented through a glycerol density gradient at rates corresponding to proteins of native molecular weights of 35 to 50 kD and 110 kD. 1 Second second ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 TRE Tre NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 DNA dna NOUN NN Number=Sing _ _ _ _ 6 binding binding VERB VBG VerbForm=Ger _ _ _ _ 7 proteins protein NOUN NNS Number=Plur _ _ _ _ 8 sedimented sediment VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 through through ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 glycerol glycerol NOUN NN Number=Sing _ _ _ _ 12 density density NOUN NN Number=Sing _ _ _ _ 13 gradient gradient NOUN NN Number=Sing _ _ _ _ 14 at at ADP IN _ _ _ _ _ 15 rates rate NOUN NNS Number=Plur _ _ _ _ 16 corresponding correspond VERB VBG VerbForm=Ger _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 proteins protein NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 native native ADJ JJ Degree=Pos _ _ _ _ 21 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 22 weights weight NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 35 35 NUM CD NumType=Card _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 50 50 NUM CD NumType=Card _ _ _ _ 27 kD kD NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 110 110 NUM CD NumType=Card _ _ _ _ 30 kD kD NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 8564 # text = Third, only the 50 kD protein was retained on a biotinylated DNA-streptavidin matrix when the DNA fragment contained the TRE-DNA. 1 Third third ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 only only ADV RB _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 50 50 NUM CD NumType=Card _ _ _ _ 6 kD kD NOUN NN Number=Sing _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 retained retain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 biotinylated biotinylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 streptavidin streptavidin NOUN NN Number=Sing _ _ _ _ 16 matrix matrix NOUN NN Number=Sing _ _ _ _ 17 when when ADV WRB PronType=Int _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 DNA dna NOUN NN Number=Sing _ _ _ _ 20 fragment fragment NOUN NN Number=Sing _ _ _ _ 21 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 TRE tre NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 DNA Dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 8565 # text = Fourth, extensive purification by several cycles of TRE-DNA affinity chromatography resulted in the 32, 36 to 42 and 110 kD proteins and to less extent the 50 kD factor. 1 Fourth fourth ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 extensive extensive ADJ JJ Degree=Pos _ _ _ _ 4 purification purification NOUN NN Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 several several ADJ JJ Degree=Pos _ _ _ _ 7 cycles cycle NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 TRE Tre NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 DNA Dna NOUN NN Number=Sing _ _ _ _ 12 affinity affinity NOUN NN Number=Sing _ _ _ _ 13 chromatography chromatography NOUN NN Number=Sing _ _ _ _ 14 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 32 32 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 36 36 NUM CD NumType=Card _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 42 42 NUM CD NumType=Card _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 110 110 NUM CD NumType=Card _ _ _ _ 24 kD kd NOUN NN Number=Sing _ _ _ _ 25 proteins protein NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 less less ADJ JJR Degree=Cmp _ _ _ _ 29 extent extent NOUN NN Number=Sing _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 50 50 NUM CD NumType=Card _ _ _ _ 32 kD kd NOUN NN Number=Sing _ _ _ _ 33 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 8566 # text = Two abundant proteins of 75 and 80 kD were competed out by poly[d(I-C)] in all reactions. 1 Two two NUM CD NumType=Card _ _ _ _ 2 abundant abundant ADJ JJ Degree=Pos _ _ _ _ 3 proteins protein NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 75 75 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 80 80 NUM CD NumType=Card _ _ _ _ 8 kD kD NOUN NN Number=Sing _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 competed compet VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 out out ADP RP _ _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 poly poly ADV RB _ _ _ _ SpaceAfter=No 14 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 d d PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 ] ] PUNCT -RRB- _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 all all DET DT _ _ _ _ _ 24 reactions reaction NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8567 # text = The cAMP-response element CRE, TGACGTCA, present in the 21 base-pair sequence, appears to be essential for specific protein-TRE-DNA interactions because mutation of the two G's destroys this complex. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 response response NOUN NN Number=Sing _ _ _ _ 5 element element NOUN NN Number=Sing _ _ _ _ 6 CRE CRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 TGACGTCA TGACGTCA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 present present ADJ JJ Degree=Pos _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 21 21 NUM CD NumType=Card _ _ _ _ 14 base base NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 pair pair NOUN NN Number=Sing _ _ _ _ 17 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 essential essential ADJ JJ Degree=Pos _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 protein- protein- PUNCT : _ _ _ _ SpaceAfter=No 26 TRE Tre NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 DNA dna NOUN NN Number=Sing _ _ _ _ 29 interactions interaction NOUN NNS Number=Plur _ _ _ _ 30 because because SCONJ IN _ _ _ _ _ 31 mutation mutation NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 two two NUM CD NumType=Card _ _ _ _ 35 G's G' NOUN NNS Number=Plur _ _ _ _ 36 destroys destroy VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 38 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 8568 # text = This result suggests that the cAMP response element binding protein, CREB, is involved in the protein-TRE-DNA complex and in mediating the Tax response. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 result result NOUN NN Number=Sing _ _ _ _ 3 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 cAMP camp NOUN NN Number=Sing _ _ _ _ 7 response response NOUN NN Number=Sing _ _ _ _ 8 element element NOUN NN Number=Sing _ _ _ _ 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 involved involved ADJ JJ Degree=Pos _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 19 TRE Tre NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 DNA dna NOUN NN Number=Sing _ _ _ _ 22 complex complex NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 in in SCONJ IN _ _ _ _ _ 25 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 Tax tax PROPN NNP Number=Sing _ _ _ _ 28 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8569 # text = Document 0030011489 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011489 0030011489 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8570 # text = ras protein activity is essential for T-cell antigen receptor signal transduction. 1 ras ra NOUN NN Number=Sing _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 activity activity NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 essential essential ADJ JJ Degree=Pos _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 signal signal NOUN NN Number=Sing _ _ _ _ 12 transduction transduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8571 # text = In a Jurkat cell model of T-cell activation an interleukin-2 promoter/reporter gene construct was activated by antigen receptor agonism in combination with the lymphokine interleukin-1. 1 In in ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 model model NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 reporter reporter NOUN NN Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 construct construct NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 23 receptor receptor NOUN NN Number=Sing _ _ _ _ 24 agonism agonism NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 combination combination NOUN NN Number=Sing _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 30 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 8572 # text = Antigen receptor signals could be mimicked by suboptimal activation of protein kinase C (PKC) with phorbol esters in combination with calcium mobilization by an ionophore. 1 Antigen Antigen ADJ JJ Degree=Pos _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ _ 3 signals signal NOUN NNS Number=Plur _ _ _ _ 4 could could AUX MD VerbForm=Fin _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 mimicked mimick VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 suboptimal suboptimal ADJ JJ Degree=Pos _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 kinase kinase NOUN NN Number=Sing _ _ _ _ 13 C C PROPN NNP Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 19 esters ester NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 combination combination NOUN NN Number=Sing _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 calcium calcium NOUN NN Number=Sing _ _ _ _ 24 mobilization mobilization NOUN NN Number=Sing _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 ionophore ionophore NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 8573 # text = In cotransfection experiments, oncogenic rats obviated the need for PKC stimulation but did not replace either the calcium signal or interleukin-1. 1 In in ADP IN _ _ _ _ _ 2 cotransfection cotransfection NOUN NN Number=Sing _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 oncogenic oncogenic ADJ JJ Degree=Pos _ _ _ _ 6 rats rat NOUN NNS Number=Plur _ _ _ _ 7 obviated obviate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 need need NOUN NN Number=Sing _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 PKC PKC NOUN NN Number=Sing _ _ _ _ 12 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 replace replace VERB VB VerbForm=Inf _ _ _ _ 17 either either CCONJ CC _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 calcium calcium NOUN NN Number=Sing _ _ _ _ 20 signal signal NOUN NN Number=Sing _ _ _ _ 21 or or CCONJ CC _ _ _ _ _ 22 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8574 # text = Activated ras expression also replaced the requirement for PKC stimulation in activation of the T-cell transcription factor NF-AT. 1 Activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 ras ra NOUN NNS Number=Plur _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 replaced replace VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 requirement requirement NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 PKC PKC NOUN NN Number=Sing _ _ _ _ 10 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 AT at PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 8575 # text = A dominant inhibitory ras mutant specifically blocked antigen receptor agonism, indicating that ras activity is required for antigen receptor signaling. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 3 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 4 ras ra AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 6 specifically specifically ADV RB _ _ _ _ _ 7 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ _ 10 agonism agonism NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 ras ras NOUN NNS Number=Plur _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 antigen antigen VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ _ 21 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 8576 # text = In addition, an inhibitor of PKC blocked both activated ras and phorbol ester stimulation, suggesting a role for ras upstream of PKC. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 PKC PKC PROPN NNP Number=Sing _ _ _ _ 8 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 both both CCONJ CC _ _ _ _ _ 10 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 ras ra NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 14 ester ester NOUN NN Number=Sing _ _ _ _ 15 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 role role NOUN NN Number=Sing _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 ras ra NOUN NNS Number=Plur _ _ _ _ 22 upstream upstream NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8577 # text = Document 0030011491 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011491 0030011491 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8578 # text = Enhanced responsiveness to nuclear factor kappa B contributes to the unique phenotype of simian immunodeficiency virus variant SIVsmmPBj14. 1 Enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 nuclear nuclear VERB VB VerbForm=Inf _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 contributes contribute NOUN NNS Number=Plur _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 unique unique ADJ JJ Degree=Pos _ _ _ _ 12 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 simian simian ADJ JJ Degree=Pos _ _ _ _ 15 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ _ 17 variant variant NOUN NN Number=Sing _ _ _ _ 18 SIVsmmPBj14 Sivsmmpbj14 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8579 # text = Infection with a variant of simian immunodeficiency virus, SIVsmmPBj14, leads to severe acute disease in macaques. 1 Infection Infection NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 variant variant NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 simian simian ADJ JJ Degree=Pos _ _ _ _ 7 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 8 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 SIVsmmPBj14 Sivsmmpbj14 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 severe severe VERB VB VerbForm=Inf _ _ _ _ 15 acute acute ADJ JJ Degree=Pos _ _ _ _ 16 disease disease NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 macaques macaque NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 8580 # text = This study was designed to investigate the functional significance of previously described mutations in the viral long terminal repeat (LTR) and to elucidate their contribution to the unique phenotype of SIVsmmPBj14. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 designed design VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 functional functional ADJ JJ Degree=Pos _ _ _ _ 9 significance significance NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 previously previously ADV RB _ _ _ _ _ 12 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 mutations mutation NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 viral viral ADJ JJ Degree=Pos _ _ _ _ 17 long long ADJ JJ Degree=Pos _ _ _ _ 18 terminal terminal NOUN NN Number=Sing _ _ _ _ 19 repeat repeat NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 elucidate elucidate VERB VB VerbForm=Inf _ _ _ _ 26 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 27 contribution contribution NOUN NN Number=Sing _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 unique unique ADJ JJ Degree=Pos _ _ _ _ 31 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 SIVsmmPBj14 SIVsmmPBj14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 8581 # text = LTR-directed transcription was measured by using luciferase reporter constructs that were transiently transfected into cultured cells. 1 LTR- LTR- SYM NFP _ _ _ _ SpaceAfter=No 2 directed direct VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 measured measure VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by SCONJ IN _ _ _ _ _ 7 using use VERB VBG VerbForm=Ger _ _ _ _ 8 luciferase luciferase ADJ JJ Degree=Pos _ _ _ _ 9 reporter reporter NOUN NN Number=Sing _ _ _ _ 10 constructs construct NOUN NNS Number=Plur _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 transiently transiently ADV RB _ _ _ _ _ 14 transfected transfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 into into ADP IN _ _ _ _ _ 16 cultured culture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 8582 # text = In a wide range of cell types, the basal transcriptional activity of the LTR from SIVsmmPBj14 was found to be 2- to 4.5-fold higher than that of an LTR from a non-acutely pathogenic strain. 1 In in ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 wide wide ADJ JJ Degree=Pos _ _ _ _ 4 range range NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 basal basal ADJ JJ Degree=Pos _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 LTR LTR PROPN NNP Number=Sing _ _ _ _ 16 from from ADP IN _ _ _ _ _ 17 SIVsmmPBj14 SIVsmmPBj14 PROPN NNP Number=Sing _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 4.5 4.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 fold fold VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 higher higher ADJ JJR Degree=Cmp _ _ _ _ 29 than than ADP IN _ _ _ _ _ 30 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 LTR LTR NOUN NN Number=Sing _ _ _ _ 34 from from ADP IN _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 non-acutely non-acutely ADV RB _ _ _ _ _ 37 pathogenic pathogenic ADJ JJ Degree=Pos _ _ _ _ 38 strain strain NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 8583 # text = These LTRs differ by five point mutations and a 22-bp duplication in SIVsmmPBj14, which includes a nuclear factor kappa B (NF kappa B) site. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 LTRs LTR NOUN NNS Number=Plur _ _ _ _ 3 differ differ VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 five five NUM CD NumType=Card _ _ _ _ 6 point point NOUN NN Number=Sing _ _ _ _ 7 mutations mutation NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 22 22 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 bp bp NOUN NN Number=Sing _ _ _ _ 13 duplication duplication NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 SIVsmmPBj14 SIVsmmPBj14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 includes include VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 kappa kappa NOUN NN Number=Sing _ _ _ _ 23 B b PROPN NNP Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 NF Nf PROPN NNP Number=Sing _ _ _ _ 26 kappa kappa NOUN NN Number=Sing _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 8584 # text = Transcriptional differences between these LTRs were further enhanced by two- to threefold upon treatment of cells with phorbol ester or tumor necrosis factor alpha or by cotransfection with plasmids expressing NF kappa B subunits. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 differences difference NOUN NNS Number=Plur _ _ _ _ 3 between between ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 LTRs LTR NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 further further ADV RB _ _ _ _ _ 8 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 threefold threefold VERB VB VerbForm=Inf _ _ _ _ 14 upon upon ADP IN _ _ _ _ _ 15 treatment treatment NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 20 ester ester NOUN NN Number=Sing _ _ _ _ 21 or or CCONJ CC _ _ _ _ _ 22 tumor tumor NOUN NN Number=Sing _ _ _ _ 23 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 alpha alpha NOUN NN Number=Sing _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 cotransfection cotransfection NOUN NN Number=Sing _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 31 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 32 NF NF PROPN NNP Number=Sing _ _ _ _ 33 kappa kappa PROPN NNP Number=Sing _ _ _ _ 34 B b PROPN NNP Number=Sing _ _ _ _ 35 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 8585 # text = Mutagenesis studies, and the use of a reporter construct containing an enhancerless promoter, indicate that these transcriptional effects are due principally to the 22-bp sequence duplication and the NF kappa B site contained within it. 1 Mutagenesis Mutagenesis PROPN NNP Number=Sing _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 use use NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 reporter reporter NOUN NN Number=Sing _ _ _ _ 10 construct construct NOUN NN Number=Sing _ _ _ _ 11 containing contain VERB VBG VerbForm=Ger _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 enhancerless enhancerless ADJ JJ Degree=Pos _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 indicate indicate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 19 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 20 effects effect NOUN NNS Number=Plur _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 due due ADP IN _ _ _ _ _ 23 principally principally ADV RB _ _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 22 22 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 bp bp NOUN NN Number=Sing _ _ _ _ 29 sequence sequence NOUN NN Number=Sing _ _ _ _ 30 duplication duplication NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 NF NF PROPN NNP Number=Sing _ _ _ _ 34 kappa kappa NOUN NN Number=Sing _ _ _ _ 35 B b NOUN NN Number=Sing _ _ _ _ 36 site site NOUN NN Number=Sing _ _ _ _ 37 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 within within ADP IN _ _ _ _ _ 39 it it PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 8586 # text = Finally, infectious virus stocks that were isogenic except for the LTR were generated. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 infectious infectious ADJ JJ Degree=Pos _ _ _ _ 4 virus virus NOUN NN Number=Sing _ _ _ _ 5 stocks stock NOUN NNS Number=Plur _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 isogenic isogenic ADJ JJ Degree=Pos _ _ _ _ 9 except except ADP IN _ _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 LTR Ltr NOUN NN Number=Sing _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 generated generate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 8587 # text = The LTR from SIVsmmPBj14 was found to confer an increase in the kinetics of virus replication in cultured cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 LTR LTR PROPN NNP Number=Sing _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 SIVsmmPBj14 SIVsmmPBj14 PROPN NNP Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 confer confer VERB VB VerbForm=Inf _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 increase increase NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 virus virus NOUN NN Number=Sing _ _ _ _ 16 replication replication NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 cultured cultured ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 8588 # text = Inclusion of this LTR in recombinant SIVs also resulted in a two- to threefold rise in the extent of cellular proliferation that was induced in quiescent simian peripheral blood mononuclear cells. 1 Inclusion inclusion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 LTR Ltr NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 7 SIVs SIVs PROPN NNP Number=Sing _ _ _ _ 8 also also ADV RB _ _ _ _ _ 9 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 threefold threefold VERB VB VerbForm=Inf _ _ _ _ 16 rise rise NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 extent extent NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 22 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 23 that that PRON WDT PronType=Rel _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 quiescent quiescent ADJ JJ Degree=Pos _ _ _ _ 28 simian simian ADJ JJ Degree=Pos _ _ _ _ 29 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 30 blood blood NOUN NN Number=Sing _ _ _ _ 31 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 8589 # text = These studies are consistent with the hypothesis that LTR mutations assist SIVsmmPBj14 in responding efficiently to cellular stimulation and allow it to replicate to high titers during the acute phase of viral infection. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 LTR LTR PROPN NNP Number=Sing _ _ _ _ 10 mutations mutation NOUN NNS Number=Plur _ _ _ _ 11 assist assist VERB VB VerbForm=Inf _ _ _ _ 12 SIVsmmPBj14 SIVsmmPBj14 PROPN NNP Number=Sing _ _ _ _ 13 in in SCONJ IN _ _ _ _ _ 14 responding respond VERB VBG VerbForm=Ger _ _ _ _ 15 efficiently efficiently ADV RB _ _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 18 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 allow allow VERB VB VerbForm=Inf _ _ _ _ 21 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 replicate replicate VERB VB VerbForm=Inf _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 high high ADJ JJ Degree=Pos _ _ _ _ 26 titers titer NOUN NNS Number=Plur _ _ _ _ 27 during during ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 acute acute ADJ JJ Degree=Pos _ _ _ _ 30 phase phase NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 viral viral ADJ JJ Degree=Pos _ _ _ _ 33 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8590 # text = Document 0030011492 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011492 0030011492 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8591 # text = [Molecular-biologic aspects of interaction between nervous and immune systems] 1 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 Molecular- Molecular- SYM NFP _ _ _ _ SpaceAfter=No 3 biologic biologic ADJ JJ Degree=Pos _ _ _ _ 4 aspects aspect NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 interaction interaction NOUN NN Number=Sing _ _ _ _ 7 between between ADP IN _ _ _ _ _ 8 nervous nervous ADJ JJ Degree=Pos _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 immune immune ADJ JJ Degree=Pos _ _ _ _ 11 systems system NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 8592 # text = The problem of the neuro-immuno interactions on the level of the protein trans-factors, stimulating interleukin-2 (IL-2) gene expression was discussed. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 problem problem NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 neuro neuro NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 immuno immuno DET DT _ _ _ _ _ 8 interactions interaction NOUN NNS Number=Plur _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 level level NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 stimulating stimulate VERB VBG VerbForm=Ger _ _ _ _ 20 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 31 discussed discuss VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 8593 # text = The physico-chemical and functional parameters of the low molecular nuclear proteins (SP and BP- 14, 18, 19 kDs) isolated from splenic and brain cells of immunized rats were studied. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 physico physico NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 chemical chemical ADJ JJ Degree=Pos _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 functional functional ADJ JJ Degree=Pos _ _ _ _ 7 parameters parameter NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 low low ADJ JJ Degree=Pos _ _ _ _ 11 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 proteins protein NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 SP sp PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 BP bp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ _ 19 14 14 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 18 18 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 19 19 NUM CD NumType=Card _ _ _ _ 24 kDs kD NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 splenic splenic NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 brain brain NOUN NN Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 immunized immunized ADJ JJ Degree=Pos _ _ _ _ 34 rats rat NOUN NNS Number=Plur _ _ _ _ 35 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 8594 # text = The binding of these proteins to the regulatory region of IL-2 gene in vitro and stimulation of the IL-2mRNA synthesis in splenic T-lymphocytes culture in normal conditions were shown. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 binding binding NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 9 region region NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 vitro vitro NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 25 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 splenic splenic ADJ JJ Degree=Pos _ _ _ _ 28 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 30 culture culture NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 normal normal ADJ JJ Degree=Pos _ _ _ _ 33 conditions condition NOUN NNS Number=Plur _ _ _ _ 34 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 8595 # text = The protective effect of SP and BP on the IL-2mRNA synthesis in stressful conditions and by the T-cells treatment with the CsA was demonstrated. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 protective protective ADJ JJ Degree=Pos _ _ _ _ 3 effect effect NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 SP sp PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 BP BP PROPN NNP Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 14 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 stressful stressful ADJ JJ Degree=Pos _ _ _ _ 17 conditions condition NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 treatment treatment NOUN NN Number=Sing _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 CsA csa PROPN NNP Number=Sing _ _ _ _ 27 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 28 demonstrated demonstrated VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8596 # text = Document 0030011494 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011494 0030011494 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8597 # text = Interleukin-7 upregulates the interleukin-2-gene expression in activated human T lymphocytes at the transcriptional level by enhancing the DNA binding activities of both nuclear factor of activated T cells and activator protein-1. 1 Interleukin Interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 7 7 NUM CD NumType=Card _ _ _ _ 4 upregulates upregulate NOUN NNS Number=Plur _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 T t NOUN NN Number=Sing _ _ _ _ 16 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 17 at at ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 20 level level NOUN NN Number=Sing _ _ _ _ 21 by by SCONJ IN _ _ _ _ _ 22 enhancing enhance VERB VBG VerbForm=Ger _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 DNA dna NOUN NN Number=Sing _ _ _ _ 25 binding bind VERB VBG VerbForm=Ger _ _ _ _ 26 activities activity NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 both both DET DT _ _ _ _ _ 29 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 T T PROPN NNP Number=Sing _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 activator activator NOUN NN Number=Sing _ _ _ _ 37 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8598 # text = In the present report, we studied the role of the stromal-derived cytokine interleukin-7 (IL-7) in the IL-2-gene regulation in activated T lymphocytes. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 role role NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 stromal stromal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 16 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 7 7 NUM CD NumType=Card _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 gene gene NOUN NN Number=Sing _ _ _ _ 31 regulation regulation NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 activated activated ADJ JJ Degree=Pos _ _ _ _ 34 T T PROPN NNP Number=Sing _ _ _ _ 35 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 8599 # text = Production of IL-2 requires the formation of transcription factors involved in the IL-2-gene regulation. 1 Production Production NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 formation formation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ _ 12 involved involve ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 gene gene NOUN NN Number=Sing _ _ _ _ 20 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 8600 # text = T-cell receptor (TCR)/CD3 engagement results in the activation of nuclear factor of activated T cells (NFAT), activator protein-1 (AP-1), and nuclear factor kappaB (NFkappaB), whereas the CD28 responsive complex (CD28RC) is activated in response to the CD28 signal. 1 T- T- SYM NFP _ _ _ _ SpaceAfter=No 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 receptor receptor NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 TCR TCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 7 /CD3 /CD3 NUM CD NumType=Card _ _ _ _ 8 engagement engagement NOUN NN Number=Sing _ _ _ _ 9 results result NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 T T PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 activator activator NOUN NN Number=Sing _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 -1 -1 NUM CD NumType=Card _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ _ 36 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 whereas whereas SCONJ IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 44 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 45 complex complex NOUN NN Number=Sing _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 CD28RC CD28RC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ _ 49 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 50 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 51 in in ADP IN _ _ _ _ _ 52 response response NOUN NN Number=Sing _ _ _ _ 53 to to ADP IN _ _ _ _ _ 54 the the DET DT Definite=Def|PronType=Art _ _ _ _ 55 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 56 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 8601 # text = Costimulation of phytohemagglutinin/anti-CD28 activated T lymphocytes with IL-7 induces a fivefold enhanced IL-2-mRNA accumulation and a 2.5-fold enhanced protein secretion. 1 Costimulation Costimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 phytohemagglutinin/anti-CD28 phytohemagglutinin/anti-CD28 NUM CD NumType=Card _ _ _ _ 4 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 7 7 NUM CD NumType=Card _ _ _ _ 11 induces induce NOUN NNS Number=Plur _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 fivefold fivefold NOUN NN Number=Sing _ _ _ _ 14 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 20 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 2.5 2.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 fold fold NOUN NN Number=Sing _ _ _ _ 26 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 protein protein NOUN NN Number=Sing _ _ _ _ 28 secretion secretion NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 8602 # text = The IL-2-gene transcription rate is increased 3.4-fold, indicating that the effect of IL-7 is in part mediated at the transcriptional level. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 rate rate NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 3.4 3.4 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 effect effect NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 7 7 NUM CD NumType=Card _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 part part NOUN NN Number=Sing _ _ _ _ 26 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 at at ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 30 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 8603 # text = The molecular mechanisms underlying the IL-7 effect involve the upregulation of the DNA binding activity of NFAT (60%) and AP-1 (120%), without affecting the activities of NFkappaB and CD28RC, which was confirmed by transfection assays. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 3 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 4 underlying underly VERB VBG VerbForm=Ger _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 7 7 NUM CD NumType=Card _ _ _ _ 9 effect effect NOUN NN Number=Sing _ _ _ _ 10 involve involve VERB VB VerbForm=Inf _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 DNA dna NOUN NN Number=Sing _ _ _ _ 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 60 60 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 120 120 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 without without SCONJ IN _ _ _ _ _ 34 affecting affect VERB VBG VerbForm=Ger _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 activities activity NOUN NNS Number=Plur _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 CD28RC CD28RC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 which which PRON WDT PronType=Rel _ _ _ _ 43 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 44 confirmed confirm VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 45 by by ADP IN _ _ _ _ _ 46 transfection transfection NOUN NN Number=Sing _ _ _ _ 47 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 8604 # text = We also show that the IL-7-induced enhancement of the AP-1-DNA binding activity is not cyclosporin A-sensitive. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 DNA dna NOUN NN Number=Sing _ _ _ _ 19 binding binding NOUN NN Number=Sing _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 cyclosporin cyclosporin VERB VB VerbForm=Inf _ _ _ _ 24 A a DET DT Definite=Ind|PronType=Art _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 sensitive sensitive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 8605 # text = Since AP-1 is part of the NFAT complex, we conclude that the IL-7-signaling pathway is involved in the activation of the fos and jun proteins of which AP-1 consists. 1 Since since ADP IN _ _ _ _ _ 2 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 part part NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 10 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 13 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 signaling signaling NOUN NN Number=Sing _ _ _ _ 21 pathway pathway NOUN NN Number=Sing _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 involved involved ADJ JJ Degree=Pos _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 fos fo NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 jun jun NOUN NN Number=Sing _ _ _ _ 32 proteins protein NOUN NNS Number=Plur _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 which which PRON WDT PronType=Rel _ _ _ _ 35 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ _ 38 consists consist NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8606 # text = Document 0030011499 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011499 0030011499 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8607 # text = Differential induction of interferon (IFN)-inducible protein 10 following differentiation of a monocyte, macrophage cell lineage is related to the changes of nuclear proteins bound to IFN stimulus response element and kappaB sites. 1 Differential differential ADJ JJ Degree=Pos _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 interferon interferon PROPN NNP Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 - - PUNCT : _ _ _ _ SpaceAfter=No 9 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 10 10 NUM CD NumType=Card _ _ _ _ 12 following follow VERB VBG VerbForm=Ger _ _ _ _ 13 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 lineage lineage NOUN NN Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 related related ADJ JJ Degree=Pos _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 changes change NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 28 proteins protein NOUN NNS Number=Plur _ _ _ _ 29 bound bound VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 to to PART TO _ _ _ _ _ 31 IFN IFN VERB VB VerbForm=Inf _ _ _ _ 32 stimulus stimulus ADJ JJ Degree=Pos _ _ _ _ 33 response response NOUN NN Number=Sing _ _ _ _ 34 element element NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 kappaB kappab NOUN NN Number=Sing _ _ _ _ 37 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8608 # text = We examined chemokine gene expression following the differentiation of a monocyte, macrophage cell lineage. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 chemokine chemokine NOUN NN Number=Sing _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 following follow VERB VBG VerbForm=Ger _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 8609 # text = The human monoblastic cell line, U937 was differentiated to macrophages by the treatment with either phorbol 12-myristate 13-acetate (PMA), retinoic acid (RA), or vitamin D3 (VitD3). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 monoblastic monoblastic ADJ JJ Degree=Pos _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 U937 U937 NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 treatment treatment NOUN NN Number=Sing _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 either either DET DT _ _ _ _ _ 17 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 18 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - PUNCT : _ _ _ _ SpaceAfter=No 20 myristate myristate NOUN NN Number=Sing _ _ _ _ 21 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT : _ _ _ _ SpaceAfter=No 23 acetate acetate NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 29 acid acid NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 or or CCONJ CC _ _ _ _ _ 35 vitamin vitamin NOUN NN Number=Sing _ _ _ _ 36 D3 D3 NOUN NN Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 VitD3 VitD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 8610 # text = The gene expression of interferon (IFN)-inducible protein 10 (IP-10) (a CXC chemokine) was markedly augmented by the IFNgamma treatment in PMA- or RA-differentiated U937 cells, but only marginally in undifferentiated or VitD3-treated cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 interferon interferon PROPN NNP Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 - - PUNCT : _ _ _ _ SpaceAfter=No 10 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 10 10 NUM CD NumType=Card _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 IP ip NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 CXC Cxc NOUN NN Number=Sing _ _ _ _ 21 chemokine chemokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 markedly markedly ADV RB _ _ _ _ _ 25 augmented augment VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 IFNgamma IFNgamma PROPN NNP Number=Sing _ _ _ _ 29 treatment treatment NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ _ 33 or or CCONJ CC _ _ _ _ _ 34 RA Ra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 U937 U937 NOUN NN Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 but but CCONJ CC _ _ _ _ _ 41 only only ADV RB _ _ _ _ _ 42 marginally marginally ADV RB _ _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 undifferentiated undifferentiated ADJ JJ Degree=Pos _ _ _ _ 45 or or CCONJ CC _ _ _ _ _ 46 VitD3 VitD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 49 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 8611 # text = In contrast, another inducible gene expression of monocyte chemotactic protein-1 (a CC chemokine) and the activation of the transcriptional factor (FcRFgamma) bound to the gamma response region were similarly or less abundantly induced by IFNgamma treatment in PMA- or RA-differentiated U937 cells, indicating that increased IP-10 mRNA induction was not due to the augmented ability of the cells to respond to the presence of IFNgamma. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 another another DET DT _ _ _ _ _ 5 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 monocyte monocyte ADJ JJ Degree=Pos _ _ _ _ 10 chemotactic chemotactic ADJ JJ Degree=Pos _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 CC cc NOUN NN Number=Sing _ _ _ _ 17 chemokine chemokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 FcRFgamma FcRFgamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 bound bound ADJ JJ Degree=Pos _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 gamma gamma NOUN NN Number=Sing _ _ _ _ 33 response response NOUN NN Number=Sing _ _ _ _ 34 region region NOUN NN Number=Sing _ _ _ _ 35 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 similarly similarly ADV RB _ _ _ _ _ 37 or or CCONJ CC _ _ _ _ _ 38 less less ADV RBR Degree=Cmp _ _ _ _ 39 abundantly abundantly ADV RB _ _ _ _ _ 40 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 by by ADP IN _ _ _ _ _ 42 IFNgamma IFNgamma PROPN NNP Number=Sing _ _ _ _ 43 treatment treatment NOUN NN Number=Sing _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT , _ _ _ _ _ 47 or or CCONJ CC _ _ _ _ _ 48 RA Ra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 51 U937 U937 NOUN NN Number=Sing _ _ _ _ 52 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 , , PUNCT , _ _ _ _ _ 54 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 55 that that SCONJ IN _ _ _ _ _ 56 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 57 IP ip NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 59 10 10 NUM CD NumType=Card _ _ _ _ 60 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 61 induction induction NOUN NN Number=Sing _ _ _ _ 62 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 63 not not PART RB _ _ _ _ _ 64 due due ADP IN _ _ _ _ _ 65 to to ADP IN _ _ _ _ _ 66 the the DET DT Definite=Def|PronType=Art _ _ _ _ 67 augmented augmented VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 68 ability ability NOUN NN Number=Sing _ _ _ _ 69 of of ADP IN _ _ _ _ _ 70 the the DET DT Definite=Def|PronType=Art _ _ _ _ 71 cells cell NOUN NNS Number=Plur _ _ _ _ 72 to to PART TO _ _ _ _ _ 73 respond respond VERB VB VerbForm=Inf _ _ _ _ 74 to to ADP IN _ _ _ _ _ 75 the the DET DT Definite=Def|PronType=Art _ _ _ _ 76 presence presence NOUN NN Number=Sing _ _ _ _ 77 of of ADP IN _ _ _ _ _ 78 IFNgamma IFNgamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 79 . . PUNCT . _ _ _ _ _ # sent_id = 8612 # text = Increased expression of IFNgamma-induced IP-10 mRNA following the differentiation of U937 cells was mediated largely by augmented transcriptional activity of the gene and was related to differentiation-dependent changes of the proteins bound to IFN stimulus response element (ISRE) and kB sites, suggesting that these nuclear proteins may determine the IP-10 mRNA inducibility by IFNgamma. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 IFNgamma IFNgamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 IP ip NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 10 10 NUM CD NumType=Card _ _ _ _ 10 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 11 following follow VERB VBG VerbForm=Ger _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 U937 U937 NUM CD NumType=Card _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 largely largely ADV RB _ _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 augmented augment VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 gene gene NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 29 related related ADJ JJ Degree=Pos _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 34 changes change NOUN NNS Number=Plur _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 proteins protein NOUN NNS Number=Plur _ _ _ _ 38 bound bound ADJ JJ Degree=Pos _ _ _ _ 39 to to PART TO _ _ _ _ _ 40 IFN Ifn VERB VB VerbForm=Inf _ _ _ _ 41 stimulus stimulus ADJ JJ Degree=Pos _ _ _ _ 42 response response NOUN NN Number=Sing _ _ _ _ 43 element element NOUN NN Number=Sing _ _ _ _ 44 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 45 ISRE ISRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 ) ) PUNCT -RRB- _ _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 kB kb NOUN NN Number=Sing _ _ _ _ 49 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 , , PUNCT , _ _ _ _ _ 51 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 52 that that SCONJ IN _ _ _ _ _ 53 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 54 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 55 proteins protein NOUN NNS Number=Plur _ _ _ _ 56 may may AUX MD VerbForm=Fin _ _ _ _ 57 determine determine VERB VB VerbForm=Inf _ _ _ _ 58 the the DET DT Definite=Def|PronType=Art _ _ _ _ 59 IP ip NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 - - PUNCT , _ _ _ _ SpaceAfter=No 61 10 10 NUM CD NumType=Card _ _ _ _ 62 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 63 inducibility inducibility NOUN NN Number=Sing _ _ _ _ 64 by by ADP IN _ _ _ _ _ 65 IFNgamma IFNgamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 66 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8613 # text = Document 0030011500 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011500 0030011500 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8614 # text = CD28 costimulation augments IL-2 secretion of activated lamina propria T cells by increasing mRNA stability without enhancing IL-2 gene transactivation. 1 CD28 CD28 NUM CD NumType=Card _ _ _ _ 2 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 3 augments augment NOUN NNS Number=Plur _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 secretion secretion NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 lamina lamina NOUN NN Number=Sing _ _ _ _ 11 propria proprion NOUN NN Number=Sing _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 by by SCONJ IN _ _ _ _ _ 15 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 16 mRNA mRNA DET DT Definite=Ind|PronType=Art _ _ _ _ 17 stability stability NOUN NN Number=Sing _ _ _ _ 18 without without SCONJ IN _ _ _ _ _ 19 enhancing enhance VERB VBG VerbForm=Ger _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 transactivation transactivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8615 # text = The pathways leading to activation in lamina propria (LP) T cells are different from peripheral T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 pathways pathway NOUN NNS Number=Plur _ _ _ _ 3 leading lead VERB VBG VerbForm=Ger _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 lamina lamina PROPN NNP Number=Sing _ _ _ _ 8 propria propria PROPN NNP Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 LP LP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 different different ADJ JJ Degree=Pos _ _ _ _ 16 from from ADP IN _ _ _ _ _ 17 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 8616 # text = LP T cells exhibit enhanced IL-2 secretion when activated through the CD2 pathway. 1 LP lp SYM NFP _ _ _ _ _ 2 T t NUM CD NumType=Card _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 exhibit exhibit NOUN NN Number=Sing _ _ _ _ 5 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 secretion secretion NOUN NN Number=Sing _ _ _ _ 10 when when ADV WRB PronType=Int _ _ _ _ 11 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 through through ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 CD2 Cd2 NOUN NN Number=Sing _ _ _ _ 15 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 8617 # text = Coligation of CD28 leads to synergistic enhancement of IL-2 secretion. 1 Coligation Coligation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 CD28 CD28 NUM CD NumType=Card _ _ _ _ 4 leads lead NOUN NNS Number=Plur _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 7 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 secretion secretion NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 8618 # text = Previous studies have characterized the CD28 augmentation of TCR-mediated signaling in peripheral blood T cells through transcriptional activation of an IL-2 promoter CD28 response element (CD28RE), along with enhanced mRNA stability. 1 Previous previous ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 7 augmentation augmentation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 signaling signaling NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 15 blood blood NOUN NN Number=Sing _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 through through ADP IN _ _ _ _ _ 19 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ _ 26 promoter promoter NOUN NN Number=Sing _ _ _ _ 27 CD28 CD28 NUM CD NumType=Card _ _ _ _ 28 response response NOUN NN Number=Sing _ _ _ _ 29 element element NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 CD28RE CD28RE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 along along ADP IN _ _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 38 stability stability NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 8619 # text = This study characterized molecular events involved in CD28 costimulation of IL-2 production in LP mononuclear cells (LPMC). 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 characterized characterize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 5 events event NOUN NNS Number=Plur _ _ _ _ 6 involved involved ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 CD28 CD28 NUM CD NumType=Card _ _ _ _ 9 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 production production NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 LP LP PROPN NNP Number=Sing _ _ _ _ 17 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 LPMC LPMC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 8620 # text = LPMC exhibited increased IL-2 production in response to CD28 costimulation, compared with cells activated through CD2 alone. 1 LPMC LPMC PROPN NNP Number=Sing _ _ _ _ 2 exhibited exhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 production production NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 response response NOUN NN Number=Sing _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 12 costimulation costimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 through through ADP IN _ _ _ _ _ 19 CD2 CD2 NUM CD NumType=Card _ _ _ _ 20 alone alone ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 8621 # text = IL-2 secretion was paralleled by increased expression of IL-2 mRNA, resulting from enhanced IL-2 mRNA stability. 1 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 secretion secretion NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 paralleled parallel VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 resulting result VERB VBG VerbForm=Ger _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ _ 22 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 23 stability stability NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 8622 # text = In contrast to transcriptional activation in PBMC, EMSA revealed that CD28 coligation of CD2-activated LPMC does not result in increased binding of trans-factors to the CD28RE, nor did Western blots detect changes in I-kappaBalpha or I-kappaBbeta levels following CD28 coligation. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 PBMC PBMC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 EMSA EMSA PROPN NNP Number=Sing _ _ _ _ 10 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 13 coligation coligation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 CD2 CD2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 LPMC Lpmc PROPN NNP Number=Sing _ _ _ _ 19 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 result result VERB VB VerbForm=Inf _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 binding binding NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 factors factor NOUN NNS Number=Plur _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 CD28RE Cd28re NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 nor nor CCONJ CC _ _ _ _ _ 34 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 Western western ADJ JJ Degree=Pos _ _ _ _ 36 blots blot NOUN NNS Number=Plur _ _ _ _ 37 detect detect VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 38 changes change NOUN NNS Number=Plur _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 I I PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 kappaBalpha kappaBalpha PROPN NNP Number=Sing _ _ _ _ 43 or or CCONJ CC _ _ _ _ _ 44 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 45 -kappaBbeta -kappaBbeta PROPN NNP Number=Sing _ _ _ _ 46 levels level NOUN NNS Number=Plur _ _ _ _ 47 following follow VERB VBG VerbForm=Ger _ _ _ _ 48 CD28 Cd28 NUM CD NumType=Card _ _ _ _ 49 coligation coligation NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 8623 # text = Furthermore, CD28 coligation fails to enhance IL-2 promoter-reporter or RE/AP construct expression in CD2-activated LPMC. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 CD28 CD28 NUM CD NumType=Card _ _ _ _ 4 coligation coligation NOUN NN Number=Sing _ _ _ _ 5 fails fail VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 8 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 reporter reporter NOUN NN Number=Sing _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 RE re NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 / / PUNCT , _ _ _ _ SpaceAfter=No 17 AP ap NOUN NN Number=Sing _ _ _ _ 18 construct construct NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 CD2 CD2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT : _ _ _ _ SpaceAfter=No 23 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 LPMC Lpmc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8624 # text = The results reported herein indicate that the molecular mechanisms involved in CD28 cosignaling and regulation of IL-2 secretion in LP T cells are unique to that compartment and differ from those seen in peripheral blood T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 reported report VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 herein herein ADV RB _ _ _ _ _ 5 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 9 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 10 involved involved ADJ JJ Degree=Pos _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 CD28 Cd28 NUM CD NumType=Card _ _ _ _ 13 cosignaling cosignaling NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 regulation regulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ _ 20 secretion secretion NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 LP LP PROPN NNP Number=Sing _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 unique unique ADJ JJ Degree=Pos _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 29 compartment compartment NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 differ differ VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 32 from from ADP IN _ _ _ _ _ 33 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 34 seen see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 37 blood blood NOUN NN Number=Sing _ _ _ _ 38 T t PROPN NNP Number=Sing _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 8625 # text = These observations suggest a biological significance for different mechanisms of IL-2 activation in initiation and maintenance of the cytokine repertoire found in the mucosa. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 biological biological ADJ JJ Degree=Pos _ _ _ _ 6 significance significance NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 different different ADJ JJ Degree=Pos _ _ _ _ 9 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 initiation initiation NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 maintenance maintenance NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 22 repertoire repertoire NOUN NN Number=Sing _ _ _ _ 23 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 mucosa mucosa NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8626 # text = Document 0030011524 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011524 0030011524 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8627 # text = Transcription-independent turnover of I kappa B alpha during monocyte adherence: implications for a translational component regulating I kappa B alpha/MAD-3 mRNA levels. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 independent independent ADJ JJ Degree=Pos _ _ _ _ 4 turnover turnover NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 kappa kappa X FW Foreign=Yes _ _ _ _ 8 B b ADJ JJ Degree=Pos _ _ _ _ 9 alpha alpha NOUN NN Number=Sing _ _ _ _ 10 during during ADP IN _ _ _ _ _ 11 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 12 adherence adherence NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 : : PUNCT : _ _ _ _ _ 14 implications implication NOUN NNS Number=Plur _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 translational translational ADJ JJ Degree=Pos _ _ _ _ 18 component component NOUN NN Number=Sing _ _ _ _ 19 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 20 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 21 kappa kappa PROPN NNP Number=Sing _ _ _ _ 22 B B PROPN NNP Number=Sing _ _ _ _ 23 alpha/ alphaith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 24 MAD mad PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 3 3 NUM CD NumType=Card _ _ _ _ 27 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 28 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8628 # text = We identified I kappa B alpha/MAD-3 as an immediate-early gene in human monocytes that is expressed in response to a variety of signals, including adhesion, lipopolysaccharide, and phorbol myristate acetate. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 4 kappa kappa PROPN NNP Number=Sing _ _ _ _ 5 B B PROPN NNP Number=Sing _ _ _ _ 6 alpha/ alphaith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 7 MAD mad PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 3 3 NUM CD NumType=Card _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 early early ADJ JJ Degree=Pos _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 variety variety NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 including include VERB VBG VerbForm=Ger _ _ _ _ 31 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 37 myristate myristate NOUN NN Number=Sing _ _ _ _ 38 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 8629 # text = Within 5 min of monocyte adhesion, the level of the I kappa B alpha protein is markedly diminished but is rapidly replaced in a cycloheximide-sensitive manner within 20 min. 1 Within within ADP IN _ _ _ _ _ 2 5 5 NUM CD NumType=Card _ _ _ _ 3 min min NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 6 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 level level NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 13 kappa kappa X FW Foreign=Yes _ _ _ _ 14 B b ADJ JJ Degree=Pos _ _ _ _ 15 alpha alpha NOUN NN Number=Sing _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 markedly markedly ADV RB _ _ _ _ _ 19 diminished diminish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 rapidly rapidly ADV RB _ _ _ _ _ 23 replaced replace VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 29 manner manner NOUN NN Number=Sing _ _ _ _ 30 within within ADP IN _ _ _ _ _ 31 20 20 NUM CD NumType=Card _ _ _ _ 32 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 8630 # text = Accompanying the rapid turnover of the I kappa B alpha protein is simultaneous translocation of NF-kappa B-related transcription factors to nuclei of adhered monocytes. 1 Accompanying Accompany VERB VBG VerbForm=Ger _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 4 turnover turnover NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 I I PROPN NNP Number=Sing _ _ _ _ 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B b PROPN NNP Number=Sing _ _ _ _ 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 simultaneous simultaneous ADJ JJ Degree=Pos _ _ _ _ 14 translocation translocation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 related related ADJ JJ Degree=Pos _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 factors factor NOUN NNS Number=Plur _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 nuclei nuclei NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 adhered adher ADJ JJ Degree=Pos _ _ _ _ 28 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 8631 # text = The demonstration that NF-kappa B can regulate I kappa B alpha/MAD-3 gene transcription in other cell types suggested that the rapid increase in steady-state I kappa B alpha/MAD-3 mRNA levels we observed within 30 min of monocyte adherence would result from NF-kappa B-dependent transcriptional stimulation of the I kappa B alpha/MAD-3 gene. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 demonstration demonstration NOUN NN Number=Sing _ _ _ _ 3 that that PRON WDT PronType=Rel _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 kappa kappa PROPN NNP Number=Sing _ _ _ _ 12 B benefit PROPN NNP Number=Sing _ _ _ _ 13 alpha/ alpha/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 14 MAD mad PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 3 3 NUM CD NumType=Card _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 other other ADJ JJ Degree=Pos _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 types type NOUN NNS Number=Plur _ _ _ _ 23 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 27 increase increase NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 steady steady ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 state state NOUN NN Number=Sing _ _ _ _ 32 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 33 kappa kappa PROPN NNP Number=Sing _ _ _ _ 34 B benefit PROPN NNP Number=Sing _ _ _ _ 35 alpha/ alphaith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 36 MAD mad PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT , _ _ _ _ SpaceAfter=No 38 3 3 NUM CD NumType=Card _ _ _ _ 39 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 40 levels level NOUN NNS Number=Plur _ _ _ _ 41 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 42 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 43 within within ADP IN _ _ _ _ _ 44 30 30 NUM CD NumType=Card _ _ _ _ 45 min min NOUN NNS Number=Plur _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 48 adherence adherence NOUN NN Number=Sing _ _ _ _ 49 would would AUX MD VerbForm=Fin _ _ _ _ 50 result result VERB VB VerbForm=Inf _ _ _ _ 51 from from ADP IN _ _ _ _ _ 52 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 54 kappa kappa NOUN NN Number=Sing _ _ _ _ 55 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 57 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 58 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 59 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 60 of of ADP IN _ _ _ _ _ 61 the the DET DT Definite=Def|PronType=Art _ _ _ _ 62 I I PROPN NNP Number=Sing _ _ _ _ 63 kappa kappa PROPN NNP Number=Sing _ _ _ _ 64 B benefit PROPN NNP Number=Sing _ _ _ _ 65 alpha/ alpha/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 66 MAD mad PROPN NNP Number=Sing _ _ _ SpaceAfter=No 67 - - PUNCT , _ _ _ _ SpaceAfter=No 68 3 3 NUM CD NumType=Card _ _ _ _ 69 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 70 . . PUNCT . _ _ _ _ _ # sent_id = 8632 # text = Nuclear run-on analyses indicated that, instead, while several immediate-early cytokine genes, such as the interleukin 1 beta (IL-1 beta) gene, were transcriptionally activated during monocyte adhesion, the rate of I kappa B alpha/MAD-3 gene transcription remained constant. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 run run VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 on on ADP IN _ _ _ _ _ 5 analyses analysis NOUN NNS Number=Plur _ _ _ _ 6 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 instead instead ADV RB _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 while while SCONJ IN _ _ _ _ _ 12 several several ADJ JJ Degree=Pos _ _ _ _ 13 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 early early ADJ JJ Degree=Pos _ _ _ _ 16 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 such such ADJ JJ Degree=Pos _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 23 1 1 NUM CD NumType=Card _ _ _ _ 24 beta beta NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 transcriptionally transcriptionally ADV RB _ _ _ _ _ 35 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 during during ADP IN _ _ _ _ _ 37 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 38 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 rate rate NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 44 kappa kappa PROPN NNP Number=Sing _ _ _ _ 45 B benefit PROPN NNP Number=Sing _ _ _ _ 46 alpha/ alpha/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 47 MAD mad PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT , _ _ _ _ SpaceAfter=No 49 3 3 NUM CD NumType=Card _ _ _ _ 50 gene gene NOUN NN Number=Sing _ _ _ _ 51 transcription transcription NOUN NN Number=Sing _ _ _ _ 52 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 53 constant constant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 8633 # text = The adherence-dependent increase in I kappa B alpha/MAD-3 mRNA levels was also not a consequence of mRNA stabilization events. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 adherence adherence NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 5 increase increase NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B benefit PROPN NNP Number=Sing _ _ _ _ 10 alpha/ alpha/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 11 MAD mad PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 3 3 NUM CD NumType=Card _ _ _ _ 14 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 15 levels level NOUN NNS Number=Plur _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 also also ADV RB _ _ _ _ _ 18 not not PART RB _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 consequence consequence NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 23 stabilization stabilization NOUN NN Number=Sing _ _ _ _ 24 events event NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8634 # text = Interestingly, while increases in both IL-1 beta and I kappa B alpha/MAD-3 mRNA levels were detected in nuclei of adherent monocytes, cytoplasmic levels of IL-1 beta mRNA increased during adherence whereas those of I kappa B alpha/MAD-3 mRNA did not. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 while while SCONJ IN _ _ _ _ _ 4 increases increase NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 both both DET DT _ _ _ _ _ 7 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 beta beta NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ 14 B benefit PROPN NNP Number=Sing _ _ _ _ 15 alpha/ alpha/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 16 MAD mad PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 3 3 NUM CD NumType=Card _ _ _ _ 19 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 20 levels level NOUN NNS Number=Plur _ _ _ _ 21 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 adherent adherent ADJ JJ Degree=Pos _ _ _ _ 27 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 30 levels level NOUN NNS Number=Plur _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ _ 35 beta beta NOUN NN Number=Sing _ _ _ _ 36 mRNA mRNa SYM SYM _ _ _ _ _ 37 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 during during ADP IN _ _ _ _ _ 39 adherence adherence NOUN NN Number=Sing _ _ _ _ 40 whereas wherea SCONJ IN _ _ _ _ _ 41 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 44 kappa kappa PROPN NNP Number=Sing _ _ _ _ 45 B B PROPN NNP Number=Sing _ _ _ _ 46 alpha/ alphaith PUNCT HYPH _ _ _ _ SpaceAfter=No 47 MAD mad PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 3 3 NUM CD NumType=Card _ _ _ _ 50 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 51 did do VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 52 not not PART RB _ _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 8635 # text = Taken together, our data suggest that two interactive mechanisms regulate monocytic I kappa B alpha/MAD-3 mRNA levels. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 5 data data NOUN NN Number=Sing _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 two two NUM CD NumType=Card _ _ _ _ 9 interactive interactive ADJ JJ Degree=Pos _ _ _ _ 10 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 11 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 13 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 14 kappa kappa X GW _ _ _ _ _ 15 B benefit X GW _ _ _ _ _ 16 alpha/ alphaith X ADD _ _ _ _ SpaceAfter=No 17 MAD mad NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 3 3 NUM CD NumType=Card _ _ _ _ 20 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 21 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 8636 # text = We propose that adherent monocytes regulate nuclear processing (or decay) of I kappa B alpha/MAD-3 mRNA, thereby increasing mRNA levels without stimulating I kappa B alpha/MAD-3 gene transcription. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 adherent adherent ADJ JJ Degree=Pos _ _ _ _ 5 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 6 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 processing processing NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 or or CCONJ CC _ _ _ _ _ 11 decay decay NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B benefit NOUN NN Number=Sing _ _ _ _ 17 alpha/ alphaith PUNCT HYPH _ _ _ _ SpaceAfter=No 18 MAD mad NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 3 3 NUM CD NumType=Card _ _ _ _ 21 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 thereby thereby ADV RB _ _ _ _ _ 24 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 25 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 26 levels level NOUN NNS Number=Plur _ _ _ _ 27 without without SCONJ IN _ _ _ _ _ 28 stimulating stimulate VERB VBG VerbForm=Ger _ _ _ _ 29 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 30 kappa kappa PROPN NNP Number=Sing _ _ _ _ 31 B B PROPN NNP Number=Sing _ _ _ _ 32 alpha/ alphaith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 33 MAD mad PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT , _ _ _ _ SpaceAfter=No 35 3 3 NUM CD NumType=Card _ _ _ _ 36 gene gene NOUN NN Number=Sing _ _ _ _ 37 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 8637 # text = Moreover, since inhibition of protein synthesis leads to accumulation of I kappa B alpha/MAD-3 mRNA without stimulating I kappa B alpha/MAD-3 gene transcription, we suggest that low cytoplasmic levels of I kappa B alpha/MAD-3 mRNA are maintained by a translation-dependent degradation mechanism. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 since since ADP IN _ _ _ _ _ 4 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 8 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ 14 B benefit PROPN NNP Number=Sing _ _ _ _ 15 alpha/ alphaith PUNCT HYPH _ _ _ _ SpaceAfter=No 16 MAD mad PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 3 3 NUM CD NumType=Card _ _ _ _ 19 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 20 without without SCONJ IN _ _ _ _ _ 21 stimulating stimulate VERB VBG VerbForm=Ger _ _ _ _ 22 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 23 kappa kappa PROPN NNP Number=Sing _ _ _ _ 24 B B PROPN NNP Number=Sing _ _ _ _ 25 alpha/ alphaith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 26 MAD mad PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 3 3 NUM CD NumType=Card _ _ _ _ 29 gene gene NOUN NN Number=Sing _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 33 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 35 low low ADJ JJ Degree=Pos _ _ _ _ 36 cytoplasmic cytoplasmic NOUN NN Number=Sing _ _ _ _ 37 levels level NOUN NNS Number=Plur _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 40 kappa kappa NOUN NN Number=Sing _ _ _ _ 41 B benefit NOUN NN Number=Sing _ _ _ _ 42 alpha/ alphaith PUNCT HYPH _ _ _ _ SpaceAfter=No 43 MAD mad NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 3 3 NUM CD NumType=Card _ _ _ _ 46 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 47 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 48 maintained maintain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 49 by by ADP IN _ _ _ _ _ 50 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 51 translation translation NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 54 degradation degradation NOUN NN Number=Sing _ _ _ _ 55 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8638 # text = Document 0030011530 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011530 0030011530 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8639 # text = Cloning and characterization of the beta subunit of human proximal sequence element-binding transcription factor and its involvement in transcription of small nuclear RNA genes by RNA polymerases II and III. 1 Cloning Cloning NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 characterization characterization NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 beta beta NOUN NN Number=Sing _ _ _ _ 7 subunit subunit NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 11 sequence sequence NOUN NN Number=Sing _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 involvement involvement NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 small small ADJ JJ Degree=Pos _ _ _ _ 24 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 25 RNA RNa NOUN NN Number=Sing _ _ _ _ 26 genes gene NOUN NNS Number=Plur _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 RNA RNA PROPN NNP Number=Sing _ _ _ _ 29 polymerases polymerase NOUN NNS Number=Plur _ _ _ _ 30 II ii NUM CD NumType=Card _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 III iii NUM CD NumType=Card _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8640 # text = The proximal sequence element (PSE)-binding transcription factor (PTF), which binds the PSE of both RNA polymerase II- and RNA polymerase III-transcribed mammalian small nuclear RNA (snRNA) genes, is essential for their transcription. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 3 sequence sequence NOUN NN Number=Sing _ _ _ _ 4 element element NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 PSE PSE NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 - - PUNCT : _ _ _ _ SpaceAfter=No 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 PTF PTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 PSE Pse NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 both both DET DT _ _ _ _ _ 22 RNA RNA PROPN NNP Number=Sing _ _ _ _ 23 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 24 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 RNA RNA PROPN NNP Number=Sing _ _ _ _ 28 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 29 III iii NUM CD NumType=Card _ _ _ SpaceAfter=No 30 - - PUNCT : _ _ _ _ SpaceAfter=No 31 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 33 small small ADJ JJ Degree=Pos _ _ _ _ 34 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 35 RNA RNA PROPN NNP Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 snRNA snRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 42 essential essential ADJ JJ Degree=Pos _ _ _ _ 43 for for ADP IN _ _ _ _ _ 44 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 45 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 8641 # text = We previously reported the purification of human PTF, a complex of four subunits, and the molecular cloning and characterization of PTF gamma and delta subunits. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 previously previously ADV RB _ _ _ _ _ 3 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 purification purification NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 PTF PTF NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 complex complex NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 four four NUM CD NumType=Card _ _ _ _ 14 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 19 cloning cloning NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 characterization characterization NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 PTF PTF NOUN NN Number=Sing _ _ _ _ 24 gamma gamma NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 delta delta NOUN NN Number=Sing _ _ _ _ 27 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 8642 # text = Here we describe the isolation and expression of a cDNA encoding PTF beta, as well as functional studies using anti-PTF beta antibodies. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 describe describe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 isolation isolation NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 11 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 12 PTF Ptf PROPN NNP Number=Sing _ _ _ _ 13 beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 as as ADV RB _ _ _ _ _ 16 well well ADV RB Degree=Pos _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 functional functional ADJ JJ Degree=Pos _ _ _ _ 19 studies study NOUN NNS Number=Plur _ _ _ _ 20 using use VERB VBG VerbForm=Ger _ _ _ _ 21 anti-PTF anti-ptf ADJ JJ Degree=Pos _ _ _ _ 22 beta beta NOUN NN Number=Sing _ _ _ _ 23 antibodies antibody NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 8643 # text = Native PTF beta, in either protein fractions or a PTF-Oct-1-DNA complex, can be recognized by polyclonal antibodies raised against recombinant PTF beta. 1 Native native ADJ JJ Degree=Pos _ _ _ _ 2 PTF PTF NOUN NN Number=Sing _ _ _ _ 3 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 either either DET DT _ _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 fractions fraction NOUN NNS Number=Plur _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 PTF- Ptf- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT : _ _ _ _ SpaceAfter=No 15 DNA dna NOUN NN Number=Sing _ _ _ _ 16 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 can can AUX MD VerbForm=Fin _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 recognized recognize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 polyclonal polyclonal ADJ JJ Degree=Pos _ _ _ _ 23 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 24 raised raise VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 against against ADP IN _ _ _ _ _ 26 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 27 PTF PTF PROPN NNP Number=Sing _ _ _ _ 28 beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 8644 # text = Immunodepletion studies show that PTF beta is required for transcription of both classes of snRNA genes in vitro. 1 Immunodepletion Immunodepletion NOUN NN Number=Sing _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 PTF PTF PROPN NNP Number=Sing _ _ _ _ 6 beta beta PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 both both DET DT _ _ _ _ _ 13 classes classe NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 snRNA snRNa NOUN NN Number=Sing _ _ _ _ 16 genes gene NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 8645 # text = In addition, immunoprecipitation analyses demonstrate that substantial and similar molar amounts of TATA-binding protein (TBP) and TFIIIB90 can weakly associate with PTF at low salt conditions, but this association is dramatically reduced at high salt concentrations. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 immunoprecipitation immunoprecipitation NOUN NN Number=Sing _ _ _ _ 5 analyses analysis NOUN NNS Number=Plur _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 substantial substantial ADJ JJ Degree=Pos _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 similar similar ADJ JJ Degree=Pos _ _ _ _ 11 molar molar ADJ JJ Degree=Pos _ _ _ _ 12 amounts amount NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 TATA TATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 TBP TBP NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 TFIIIB90 TFIIIB90 PROPN NNP Number=Sing _ _ _ _ 23 can can AUX MD VerbForm=Fin _ _ _ _ 24 weakly weakly ADV RB _ _ _ _ _ 25 associate associate VERB VB VerbForm=Inf _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 PTF Ptf NOUN NN Number=Sing _ _ _ _ 28 at at ADP IN _ _ _ _ _ 29 low low ADJ JJ Degree=Pos _ _ _ _ 30 salt salt NOUN NN Number=Sing _ _ _ _ 31 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 but but CCONJ CC _ _ _ _ _ 34 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 35 association association NOUN NN Number=Sing _ _ _ _ 36 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 dramatically dramatically ADV RB _ _ _ _ _ 38 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 at at ADP IN _ _ _ _ _ 40 high high ADJ JJ Degree=Pos _ _ _ _ 41 salt salt NOUN NN Number=Sing _ _ _ _ 42 concentrations concentration NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 8646 # text = Along with our previous demonstration of both physical interactions between PTF gamma/PTF delta and TBP and the involvement of TFIIIB90 in the transcription of class III snRNA genes, these results are consistent with the notion that a TBP-containing complex related to TFIIIB is required for the transcription of class III snRNA genes, and acts through weak interaction with the four-subunit PTF. 1 Along along ADP IN _ _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 previous previous ADJ JJ Degree=Pos _ _ _ _ 5 demonstration demonstration NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 both both DET DT _ _ _ _ _ 8 physical physical ADJ JJ Degree=Pos _ _ _ _ 9 interactions interaction NOUN NNS Number=Plur _ _ _ _ 10 between between ADP IN _ _ _ _ _ 11 PTF PTF PROPN NNP Number=Sing _ _ _ _ 12 gamma gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 / / PUNCT , _ _ _ _ SpaceAfter=No 14 PTF PTF PROPN NNP Number=Sing _ _ _ _ 15 delta delta PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 TBP TBP PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 involvement involvement NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 TFIIIB90 TFIIIB90 NUM CD NumType=Card _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 class class NOUN NN Number=Sing _ _ _ _ 28 III Iii NUM CD NumType=Card _ _ _ _ 29 snRNA snRNa NOUN NN Number=Sing _ _ _ _ 30 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 33 results result NOUN NNS Number=Plur _ _ _ _ 34 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 notion notion NOUN NN Number=Sing _ _ _ _ 39 that that PRON WDT PronType=Rel _ _ _ _ 40 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 41 TBP Tbp NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 containing containing VERB VBG VerbForm=Ger _ _ _ _ 44 complex complex NOUN NN Number=Sing _ _ _ _ 45 related related ADJ JJ Degree=Pos _ _ _ _ 46 to to ADP IN _ _ _ _ _ 47 TFIIIB TFIIIB PROPN NNP Number=Sing _ _ _ _ 48 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 49 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 50 for for ADP IN _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 transcription transcription NOUN NN Number=Sing _ _ _ _ 53 of of ADP IN _ _ _ _ _ 54 class class NOUN NN Number=Sing _ _ _ _ 55 III iii NUM CD NumType=Card _ _ _ _ 56 snRNA snRNa NOUN NN Number=Sing _ _ _ _ 57 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 58 , , PUNCT , _ _ _ _ _ 59 and and CCONJ CC _ _ _ _ _ 60 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 61 through through ADP IN _ _ _ _ _ 62 weak weak ADJ JJ Degree=Pos _ _ _ _ 63 interaction interaction NOUN NN Number=Sing _ _ _ _ 64 with with ADP IN _ _ _ _ _ 65 the the DET DT Definite=Def|PronType=Art _ _ _ _ 66 four-subunit four-subunit ADJ JJ Degree=Pos _ _ _ _ 67 PTF Ptf NOUN NN Number=Sing _ _ _ SpaceAfter=No 68 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8647 # text = Document 0030011534 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011534 0030011534 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8648 # text = Functional block for 1 alpha,25-dihydroxyvitamin 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 block block NOUN NN Number=Sing _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 1 1 NUM CD NumType=Card _ _ _ _ 5 alpha,25 alpha,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 -dihydroxyvitamin -dihydroxyvitamin NOUN NN Number=Sing _ _ _ _ # sent_id = 8649 # text = D3-mediated gene regulation in human B lymphocytes. 1 D3 D3 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 -mediated -mediated ADJ JJ Degree=Pos _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ _ 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8650 # text = Elements necessary for the steroid hormone 1 alpha,25-dihydroxyvitamin D3 (1 alpha,25-(OH)2D3) to induce a biological response include the presence of specific intracellular receptors (vitamin D3 receptors (VDR)) and modulation of gene expression via hormone-activated receptor binding to regulatory regions of target genes. 1 Elements element NOUN NNS Number=Plur _ _ _ _ 2 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 steroid steroid ADJ JJ Degree=Pos _ _ _ _ 6 hormone hormone NOUN NN Number=Sing _ _ _ _ 7 1 1 NUM CD NumType=Card _ _ _ _ 8 alpha,25 alpha,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 -dihydroxyvitamin -dihydroxyvitamin NOUN NN Number=Sing _ _ _ _ 10 D3 D3 NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 alpha,25-( alpha,25-( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 2D3 2D3 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 induce induce VERB VB VerbForm=Inf _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 biological biological ADJ JJ Degree=Pos _ _ _ _ 22 response response NOUN NN Number=Sing _ _ _ _ 23 include include VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 presence presence NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 specific specific ADJ JJ Degree=Pos _ _ _ _ 28 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 29 receptors receptor NOUN NNS Number=Plur _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 vitamin vitamin NOUN NNS Number=Plur _ _ _ _ 32 D3 D3 NUM CD NumType=Card _ _ _ _ 33 receptors receptor NOUN NNS Number=Plur _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 VDR VDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 modulation modulation NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 gene gene NOUN NN Number=Sing _ _ _ _ 42 expression expression NOUN NN Number=Sing _ _ _ _ 43 via via ADP IN _ _ _ _ _ 44 hormone hormone NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 receptor receptor NOUN NN Number=Sing _ _ _ _ 48 binding bind VERB VBG VerbForm=Ger _ _ _ _ 49 to to PART TO _ _ _ _ _ 50 regulatory regulatory VERB VB VerbForm=Inf _ _ _ _ 51 regions region NOUN NNS Number=Plur _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 target target NOUN NN Number=Sing _ _ _ _ 54 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 8651 # text = These parameters were examined in normal and Epstein-Barr virus-immortalized human B cells and compared with 1 alpha,25-(OH)2D3-responsive cells of the T and monocytic lineages. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 parameters parameter NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 normal normal ADJ JJ Degree=Pos _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 Barr Barr PROPN NNP Number=Sing _ _ _ _ 11 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 immortalized immortalize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 1 1 NUM CD NumType=Card _ _ _ _ 21 alpha,25 alpha,25 NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 -( -( PUNCT . _ _ _ _ SpaceAfter=No 23 OH Oh INTJ UH _ _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 2D3 2D3 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 T T PROPN NNP Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 34 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 8652 # text = Although resting tonsillar B cells did not express VDR mRNA, activation of these cells with interleukin-4 induced VDR in the absence of exogenously supplemented 1 alpha,25-(OH)2D3. 1 Although although SCONJ IN _ _ _ _ _ 2 resting rest VERB VBG VerbForm=Ger _ _ _ _ 3 tonsillar tonsillar NOUN NN Number=Sing _ _ _ _ 4 B b ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 express express VERB VB VerbForm=Inf _ _ _ _ 9 VDR VDR PROPN NNP Number=Sing _ _ _ _ 10 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 4 4 NUM CD NumType=Card _ _ _ _ 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 VDR Vdr ADV RBR Degree=Cmp _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 absence absence NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 exogenously exogenously ADV RB _ _ _ _ _ 27 supplemented supplement VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 1 1 NUM CD NumType=Card _ _ _ _ 29 alpha,25 alpha,25 NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 -( -( PUNCT . _ _ _ _ SpaceAfter=No 31 OH Oh INTJ UH _ _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 2D3 2D3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 8653 # text = As indicators of hormone-mediated gene regulation we analyzed modulation of CD23, a common B cell/monocyte surface antigen, and 24-hydroxylase. 1 As as SCONJ IN _ _ _ _ _ 2 indicators indicator NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 hormone hormone NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 regulation regulation NOUN NN Number=Sing _ _ _ _ 9 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 10 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 modulation modulation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 CD23 CD23 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 common common ADJ JJ Degree=Pos _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 / / PUNCT , _ _ _ _ SpaceAfter=No 20 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 21 surface surface NOUN NN Number=Sing _ _ _ _ 22 antigen antigen NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 24 24 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 hydroxylase hydroxylase NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 8654 # text = 1 alpha,25-(OH)2D3 inhibited CD23 expression in U937 cells, yet failed to modulate CD23 expression in B cells. 1 1 1 NUM CD NumType=Card _ _ _ _ 2 alpha,25 alpha,25 NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 -( -( PUNCT . _ _ _ _ SpaceAfter=No 4 OH Oh INTJ UH _ _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 6 2D3 2D3 NUM CD NumType=Card _ _ _ _ 7 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 CD23 CD23 NUM CD NumType=Card _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 U937 U937 NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 yet yet CCONJ CC _ _ _ _ _ 15 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 18 CD23 CD23 NUM CD NumType=Card _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 B b ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 8655 # text = Furthermore, 1 alpha,25-(OH)2D3 induced 24-hydroxylase mRNA expression and metabolic activity in both U937 cells and lectin-activated T cells, yet failed to induce 24-hydroxylase mRNA or its metabolic activity in B cells. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 1 1 NUM CD NumType=Card _ _ _ _ 4 alpha,25 alpha,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 -( -( PUNCT . _ _ _ _ SpaceAfter=No 6 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 2D3 2D3 NUM CD NumType=Card _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 24 24 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 hydroxylase hydroxylase NOUN NN Number=Sing _ _ _ _ 13 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 metabolic metabolic ADJ JJ Degree=Pos _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 both both DET DT _ _ _ _ _ 20 U937 U937 NUM CD NumType=Card _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 lectin-activated lectin-activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 yet yet CCONJ CC _ _ _ _ _ 28 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 to to PART TO _ _ _ _ _ 30 induce induce VERB VB VerbForm=Inf _ _ _ _ 31 24 24 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 hydroxylase hydroxylase NOUN NN Number=Sing _ _ _ _ 34 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 35 or or CCONJ CC _ _ _ _ _ 36 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 37 metabolic metabolic ADJ JJ Degree=Pos _ _ _ _ 38 activity activity NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 B b ADJ JJ Degree=Pos _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 8656 # text = These findings suggest that although human B lymphocytes can express VDR mRNA and protein, they exhibit a functional block for vitamin D-dependent gene regulation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 although although SCONJ IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 9 can can AUX MD VerbForm=Fin _ _ _ _ 10 express express VERB VB VerbForm=Inf _ _ _ _ 11 VDR VDR PROPN NNP Number=Sing _ _ _ _ 12 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 17 exhibit exhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 functional functional ADJ JJ Degree=Pos _ _ _ _ 20 block block NOUN NN Number=Sing _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 vitamin vitamin NOUN NNS Number=Plur _ _ _ _ 23 D- D- SYM SYM _ _ _ _ SpaceAfter=No 24 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8657 # text = Document 0030011537 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011537 0030011537 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8658 # text = Tandem AP-1-binding sites within the human beta-globin dominant control region function as an inducible enhancer in erythroid cells. 1 Tandem tandem PROPN NNP Number=Sing _ _ _ _ 2 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 binding binding VERB VBG VerbForm=Ger _ _ _ _ 7 sites site NOUN NNS Number=Plur _ _ _ _ 8 within within ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 globin globin NOUN NN Number=Sing _ _ _ _ 14 dominant dominant NOUN NN Number=Sing _ _ _ _ 15 control control NOUN NN Number=Sing _ _ _ _ 16 region region NOUN NN Number=Sing _ _ _ _ 17 function function NOUN NN Number=Sing _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 21 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8659 # text = A powerful enhancer has been mapped to an 18-bp DNA segment located 11 kb 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 powerful powerful ADJ JJ Degree=Pos _ _ _ _ 3 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 4 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 6 mapped map VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 18 18 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 bp bp NOUN NN Number=Sing _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 segment segment NOUN NN Number=Sing _ _ _ _ 14 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 11 11 NUM CD NumType=Card _ _ _ _ 16 kb kb NOUN NN Number=Sing _ _ _ _ # sent_id = 8660 # text = 5' to the human epsilon-globin gene within the dominant control or locus-activating region. 1 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 ' ' NOUN NNS Number=Plur _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 epsilon epsilon NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 globin globin NOUN NN Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 within within ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 13 control control NOUN NN Number=Sing _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 locus locus NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 activating activating VERB VBG VerbForm=Ger _ _ _ _ 18 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 8661 # text = This enhancer is inducible in K562 human erythroleukemia cells, increasing linked gamma-globin promoter/luciferase gene expression to 170-fold over an enhancerless construct. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 K562 K562 NUM CD NumType=Card _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 erythroleukemia erythroleukemia NOUN NN Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 12 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 globin globin NOUN NN Number=Sing _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 170 170 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 fold fold NOUN NN Number=Sing _ _ _ _ 25 over over ADP IN _ _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 enhancerless enhancerless ADJ JJ Degree=Pos _ _ _ _ 28 construct construct NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 8662 # text = The enhancer consists of tandem AP-1-binding sites, phased 10 bp apart, which are both required for full activity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 3 consists consist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 tandem tandem NOUN NN Number=Sing _ _ _ _ 6 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 binding binding VERB VBG VerbForm=Ger _ _ _ _ 11 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 phased phase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 10 10 NUM CD NumType=Card _ _ _ _ 15 bp bp NOUN NN Number=Sing _ _ _ _ 16 apart apart ADV RB _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 both both ADV RB _ _ _ _ _ 21 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 full full ADJ JJ Degree=Pos _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8663 # text = DNA-protein binding assays with nuclear extracts from induced cells demonstrate a high molecular weight complex on the enhancer. 1 DNA- DNA- SYM NFP _ _ _ _ SpaceAfter=No 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 binding bind VERB VBG VerbForm=Ger _ _ _ _ 4 assays assay NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 extracts extract NOUN NNS Number=Plur _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 high high ADJ JJ Degree=Pos _ _ _ _ 14 molecular molecular NOUN NN Number=Sing _ _ _ _ 15 weight weight NOUN NN Number=Sing _ _ _ _ 16 complex complex NOUN NN Number=Sing _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 8664 # text = The formation of this complex also requires both AP-1 sites and correlates with maximal enhancer activity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 formation formation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 complex complex NOUN NN Number=Sing _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 both both DET DT _ _ _ _ _ 9 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 sites site NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 correlates correlate NOUN NNS Number=Plur _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 17 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 8665 # text = Induction of the enhancer may have a role in the increase in globin gene transcription that characterizes erythroid maturation. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 5 may may AUX MD VerbForm=Fin _ _ _ _ 6 have have VERB VB VerbForm=Inf _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 increase increase NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 globin globin ADJ JJ Degree=Pos _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 characterizes characterize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 19 maturation maturation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 8666 # text = Enhancer activity appears to be mediated by the binding of a complex of proteins from the jun and fos families to tandem AP-1 consensus sequences. 1 Enhancer Enhancer ADJ JJ Degree=Pos _ _ _ _ 2 activity activity NOUN NN Number=Sing _ _ _ _ 3 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 binding binding NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 complex complex NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 proteins protein NOUN NNS Number=Plur _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 jun jun NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 fos fo VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 families family NOUN NNS Number=Plur _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 tandem tandem VERB VB VerbForm=Inf _ _ _ _ 23 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 consensus consensus NOUN NN Number=Sing _ _ _ _ 27 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8667 # text = Document 0030011538 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011538 0030011538 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8668 # text = Human immunodeficiency virus type 1 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 3 virus virus NOUN NN Number=Sing _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ _ 5 1 1 NUM CD NumType=Card _ _ _ _ # sent_id = 8669 # text = Nef protein inhibits NF-kappa B induction in human T cells. 1 Nef Nef ADJ JJ Degree=Pos _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 induction induction NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8670 # text = Human immunodeficiency virus type 1 (HIV-1) can establish a persistent and latent infection in CD4+ T lymphocytes (W.C.Greene, N.Engl.J. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 3 virus virus NOUN NN Number=Sing _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ _ 5 1 1 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 X LS _ _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 can can AUX MD VerbForm=Fin _ _ _ _ 12 establish establish VERB VB VerbForm=Inf _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 persistent persistent ADJ JJ Degree=Pos _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 latent latent ADJ JJ Degree=Pos _ _ _ _ 17 infection infection NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 + + SYM SYM _ _ _ _ _ 21 T t NUM CD NumType=Card _ _ _ _ 22 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 W.C.Greene W.C.Greene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 N.Engl N.Engl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 .J. .J. PROPN NNP Number=Sing _ _ _ _ # sent_id = 8671 # text = Med.324:308-317, 1991; S.M.Schnittman, M.C.Psallidopoulos, H.C. Lane, L.Thompson, M.Baseler, F.Massari, C.H.Fox, N.P.Salzman, and A.S.Fauci, Science 245:305-308, 1989). 1 Med.324:308-317 Med.324:308-317 NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 1991 1991 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 ; ; PUNCT , _ _ _ _ _ 5 S.M.Schnittman S.M.Schnittman PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 M.C.Psallidopoulos M.C.Psallidopoulos PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 H.C. H.C. PROPN NNP Number=Sing _ _ _ _ 10 Lane Lane PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 L.Thompson L.Thompson PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 M.Baseler M.Baseler PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 F.Massari F.Massari PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 C.H.Fox C.H.Fox PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 N.P.Salzman N.P.Salzman PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 A.S.Fauci A.S.Fauci PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 Science science PROPN NNP Number=Sing _ _ _ _ 26 245:305 245:305 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - SYM SYM _ _ _ _ SpaceAfter=No 28 308 308 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 1989 1989 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 8672 # text = Production of HIV-1 from latently infected cells requires host cell activation by T-cell mitogens (T.Folks, D.M.Powell, M.M.Lightfoote, S.Benn, M.A. Martin, and A.S.Fauci, Science 231:600-602, 1986; D.Zagury, J. Bernard, R.Leonard, R.Cheynier, M.Feldman, P.S.Sarin, and R.C. 1 Production Production NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 latently latently ADV RB _ _ _ _ _ 8 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 host host NOUN NN Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 mitogens mitogen NOUN NNS Number=Plur _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 T.Folks T.Folk NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 D.M.Powell D.M.Powell PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 M.M.Lightfoote M.M.Lightfoote PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 S.Benn S.Benn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 M.A M.A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ 29 Martin Martin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 A.S.Fauci A.S.Fauci PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 Science Science PROPN NNP Number=Sing _ _ _ _ 35 231:600 231:600 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 -602 -602 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 1986 1986 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 ; ; PUNCT , _ _ _ _ _ 40 D.Zagury D.Zagury PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 J. J. PROPN NNP Number=Sing _ _ _ _ 43 Bernard Bernard PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 R.Leonard R.Leonard PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 R.Cheynier R.Cheynier PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 M.Feldman M.Feldman PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 , , PUNCT , _ _ _ _ _ 51 P.S.Sarin P.S.Sarin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 and and CCONJ CC _ _ _ _ _ 54 R.C. R.C. PROPN NNP Number=Sing _ _ _ _ # sent_id = 8673 # text = Gallo, Science 231:850-853, 1986). 1 Gallo Gallo PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Science science PROPN NNP Number=Sing _ _ _ _ 4 231:850-853 231:850-853 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 1986 1986 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 8674 # text = This activation is mediated by the host transcription factor NF-kappa B [G.Nabel and D.Baltimore, Nature (London) 326:711-717, 1987]. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 host host NOUN NN Number=Sing _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa PROPN NNP Number=Sing _ _ _ _ 13 B b PROPN NNP Number=Sing _ _ _ _ 14 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 G.Nabel G.Nabel PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 D.Baltimore D.Baltimore PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 Nature nature PROPN NNP Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 London London PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 326:711-717 326:711-717 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 1987 1987 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 8675 # text = We report here that the HIV-1-encoded 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ # sent_id = 8676 # text = Nef protein inhibits the induction of NF-kappa B DNA-binding activity by T- cell mitogens. 1 Nef Nef ADJ JJ Degree=Pos _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 induction induction NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 mitogens mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 8677 # text = However, Nef does not affect the DNA-binding activity of other transcription factors implicated in HIV-1 regulation, including SP-1, USF, URS, and NF-AT. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Nef Nef PROPN NNP Number=Sing _ _ _ _ 4 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 affect affect VERB VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 binding bind VERB VBG VerbForm=Ger _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 other other ADJ JJ Degree=Pos _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ _ 16 implicated implicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 including include VERB VBG VerbForm=Ger _ _ _ _ 24 SP sp NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 USF USF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 URS URS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 8678 # text = Additionally, Nef inhibits the induction of HIV-1- and interleukin 2-directed gene expression, and the effect on HIV-1 transcription depends on an intact NF-kappa B-binding site. 1 Additionally additionally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Nef Nef PROPN NNP Number=Sing _ _ _ _ 4 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 induction induction NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 interleukin interleukin ADJ JJ Degree=Pos _ _ _ _ 14 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 effect effect NOUN NN Number=Sing _ _ _ _ 23 on on ADP IN _ _ _ _ _ 24 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 depends depend VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 on on ADP IN _ _ _ _ _ 30 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 intact intact ADJ JJ Degree=Pos _ _ _ _ 32 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappa kappa NOUN NN Number=Sing _ _ _ _ 35 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 binding binding VERB VBG VerbForm=Ger _ _ _ _ 38 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 8679 # text = These results indicate that defective recruitment of NF-kappa B may underlie 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 defective defective ADJ JJ Degree=Pos _ _ _ _ 6 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 may may AUX MD VerbForm=Fin _ _ _ _ 13 underlie underlie VERB VB VerbForm=Inf _ _ _ _ # sent_id = 8680 # text = Nef's negative transcriptional effects on the HIV-1 and interleukin 2 promoters. 1 Nef Nef PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 's 's PART POS _ _ _ _ _ 3 negative negative ADJ JJ Degree=Pos _ _ _ _ 4 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 interleukin interleukin ADJ JJ Degree=Pos _ _ _ _ 13 2 2 NUM CD NumType=Card _ _ _ _ 14 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 8681 # text = Further evidence suggests that Nef inhibits NF-kappa B induction by interfering with a signal derived from the T-cell receptor complex. 1 Further further ADJ JJ Degree=Pos _ _ _ _ 2 evidence evidence NOUN NN Number=Sing _ _ _ _ 3 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Nef Nef PROPN NNP Number=Sing _ _ _ _ 6 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 induction induction NOUN NN Number=Sing _ _ _ _ 12 by by SCONJ IN _ _ _ _ _ 13 interfering interfere VERB VBG VerbForm=Ger _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 signal signal NOUN NN Number=Sing _ _ _ _ 17 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 receptor receptor NOUN NN Number=Sing _ _ _ _ 23 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8682 # text = Document 0030011543 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011543 0030011543 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8683 # text = Activation of NF-kappa B by phosphatase inhibitors involves the phosphorylation of I kappa B alpha at phosphatase 2A-sensitive sites. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 9 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 10 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B benefit PROPN NNP Number=Sing _ _ _ _ 17 alpha alpha ADV RB _ _ _ _ _ 18 at at ADP IN _ _ _ _ _ 19 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 20 2A 2a NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 23 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8684 # text = Activation of NF-kappa B by various cellular stimuli involves the phosphorylation and subsequent degradation of its inhibitor, I kappa B alpha, although the underlying mechanism remains unclear. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 various various ADJ JJ Degree=Pos _ _ _ _ 9 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 10 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 11 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 16 degradation degradation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 22 kappa kappa PROPN NNP Number=Sing _ _ _ _ 23 B b PROPN NNP Number=Sing _ _ _ _ 24 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 although although SCONJ IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 underlying underlying ADJ JJ Degree=Pos _ _ _ _ 29 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 30 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 unclear unclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 8685 # text = In the present study, the role of serine/threonine phosphatases in the regulation of I kappa B alpha phosphorylation was investigated. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 threonine threonine NUM CD NumType=Card _ _ _ _ 12 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 regulation regulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 kappa kappa X FW Foreign=Yes _ _ _ _ 19 B B X LS _ _ _ _ _ 20 alpha alpha X FW Foreign=Yes _ _ _ _ 21 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 8686 # text = Our studies demonstrate that incubation of human T cells with low concentrations (approximately 1-5 nM) of calyculin A or okadaic acid, potent inhibitors of protein phosphatase type 1 (PP-1) and type 2A (PP-2A), induces the phosphorylation of I kappa B alpha even in the absence of any cellular stimulus. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 incubation incubation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 low low ADJ JJ Degree=Pos _ _ _ _ 12 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 approximately approximately ADV RB _ _ _ _ _ 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - SYM SYM _ _ _ _ SpaceAfter=No 17 5 5 NUM CD NumType=Card _ _ _ _ 18 nM nm NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 calyculin calyculin NOUN NN Number=Sing _ _ _ _ 22 A a NOUN NN Number=Sing _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 25 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 potent potent NOUN NN Number=Sing _ _ _ _ 28 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 protein protein NOUN NN Number=Sing _ _ _ _ 31 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 32 type type NOUN NN Number=Sing _ _ _ _ 33 1 1 NUM CD NumType=Card _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 PP pp NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 1 1 X LS _ _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 type type NOUN NN Number=Sing _ _ _ _ 41 2A 2a NOUN NN Number=Sing _ _ _ _ 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 PP pp NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 46 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 54 kappa kappa X GW _ _ _ _ _ 55 B benefit X GW _ _ _ _ _ 56 alpha alpha X GW _ _ _ _ _ 57 even even ADV RB _ _ _ _ _ 58 in in ADP IN _ _ _ _ _ 59 the the DET DT Definite=Def|PronType=Art _ _ _ _ 60 absence absence NOUN NN Number=Sing _ _ _ _ 61 of of ADP IN _ _ _ _ _ 62 any any DET DT _ _ _ _ _ 63 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 64 stimulus stimulus NOUN NN Number=Sing _ _ _ SpaceAfter=No 65 . . PUNCT . _ _ _ _ _ # sent_id = 8687 # text = This action of the phosphatase inhibitors, which is associated with the activation of the RelA. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 action action NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 6 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 RelA. RelA. PROPN NNP Number=Sing _ _ _ SpaceAfter=No # sent_id = 8688 # text = p50 NF-kappa B heterodimer, is not affected by agents that block the induction of I kappa B alpha phosphorylation by tumor necrosis factor alpha (TNF-alpha). 1 p50 p50 NUM CD NumType=Card _ _ _ _ 2 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 heterodimer heterodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 agents agent NOUN NNS Number=Plur _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 block block VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 19 kappa kappa X GW _ _ _ _ _ 20 B b X GW _ _ _ _ _ 21 alpha alpha X GW _ _ _ _ _ 22 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 tumor tumor NOUN NN Number=Sing _ _ _ _ 25 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ _ 27 alpha alpha NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 8689 # text = Furthermore, the phosphorylated I kappa B alpha from calyculin A-treated cells, but not that from TNF-alpha-stimulated cells, is sensitive to PP-2A in vitro, suggesting the existence of fundamental differences in the phosphorylation of I kappa B alpha induced by the two different NF-kappa B inducers. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B b PROPN NNP Number=Sing _ _ _ _ 8 alpha alpha PROPN NNP Number=Sing _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 calyculin calyculin PROPN NNP Number=Sing _ _ _ _ 11 A a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 not not ADV RB _ _ _ _ _ 18 that that ADV WRB PronType=Dem _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 PP pp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 A a NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 existence existence NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 fundamental fundamental ADJ JJ Degree=Pos _ _ _ _ 42 differences difference NOUN NNS Number=Plur _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 48 kappa kappa PROPN NNP Number=Sing _ _ _ _ 49 B b PROPN NNP Number=Sing _ _ _ _ 50 alpha alpha NOUN NN Number=Sing _ _ _ _ 51 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 52 by by ADP IN _ _ _ _ _ 53 the the DET DT Definite=Def|PronType=Art _ _ _ _ 54 two two NUM CD NumType=Card _ _ _ _ 55 different different ADJ JJ Degree=Pos _ _ _ _ 56 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 kappa kappa NOUN NN Number=Sing _ _ _ _ 59 B b NOUN NN Number=Sing _ _ _ _ 60 inducers inducer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ _ # sent_id = 8690 # text = However, induction of I kappa B alpha phosphorylation by both TNF-alpha and the phosphatase inhibitors is associated with the subsequent degradation of I kappa B alpha. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 induction induction NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 kappa kappa X FW Foreign=Yes _ _ _ _ 7 B B X LS _ _ _ _ _ 8 alpha alpha X FW Foreign=Yes _ _ _ _ 9 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 both both DET DT _ _ _ _ _ 12 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 alpha alpha NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 18 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 24 degradation degradation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 27 kappa kappa PROPN NNP Number=Sing _ _ _ _ 28 B B PROPN NNP Number=Sing _ _ _ _ 29 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 8691 # text = We further demonstrate that TNF-alpha- and calyculin A-induced I kappa B alpha degradation exhibits similar but not identical sensitivities to a proteasome inhibitor. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 calyculin calyculin NOUN NN Number=Sing _ _ _ _ 11 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B b PROPN NNP Number=Sing _ _ _ _ 17 alpha alpha NOUN NN Number=Sing _ _ _ _ 18 degradation degradation NOUN NN Number=Sing _ _ _ _ 19 exhibits exhibit NOUN NNS Number=Plur _ _ _ _ 20 similar similar ADJ JJ Degree=Pos _ _ _ _ 21 but but CCONJ CC _ _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 identical identical ADJ JJ Degree=Pos _ _ _ _ 24 sensitivities sensitivity NOUN NNS Number=Plur _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 proteasome proteasome ADJ JJ Degree=Pos _ _ _ _ 28 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 8692 # text = Together, these results suggest that phosphorylation of I kappa B alpha, mediated through both the TNF-alpha-inducible and the PP-2A-opposing kinases, may serve to target I kappa B alpha for proteasome-mediated degradation. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B b PROPN NNP Number=Sing _ _ _ _ 12 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 through through ADP IN _ _ _ _ _ 16 both both DET PDT _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 PP pp NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2A 2a NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 opposing opposing NOUN NN Number=Sing _ _ _ _ 30 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 may may AUX MD VerbForm=Fin _ _ _ _ 33 serve serve VERB VB VerbForm=Inf _ _ _ _ 34 to to PART TO _ _ _ _ _ 35 target target VERB VB VerbForm=Inf _ _ _ _ 36 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 37 kappa kappa X GW _ _ _ _ _ 38 B b X GW _ _ _ _ _ 39 alpha alpha X GW _ _ _ _ _ 40 for for X GW _ _ _ _ _ 41 proteasome proteasome X GW _ _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8693 # text = Document 0030011544 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011544 0030011544 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8694 # text = LPS-Induced NF-kappaB activation and TNF-alpha release in human monocytes are protein tyrosine kinase dependent and protein kinase C independent. 1 LPS Lps INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 Induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 release release NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 19 kinase kinase NOUN NN Number=Sing _ _ _ _ 20 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 protein protein ADJ JJ Degree=Pos _ _ _ _ 23 kinase kinase NOUN NN Number=Sing _ _ _ _ 24 C c X GW _ _ _ _ _ 25 independent independent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8695 # text = BACKGROUND: Tumor necrosis factor alpha (TNF-alpha) is an important mediator of septic shock. 1 BACKGROUND background ADP IN _ _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Tumor tumor PROPN NNP Number=Sing _ _ _ _ 4 necrosis necrosis ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 important important ADJ JJ Degree=Pos _ _ _ _ 15 mediator mediator NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 septic septic ADJ JJ Degree=Pos _ _ _ _ 18 shock shock NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 8696 # text = Endotoxin (LPS) signal transduction in human monocytes leads to activation of nuclear factor-kappa B (NF-kappaB) and TNF-alpha release. 1 Endotoxin Endotoxin PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 signal signal NOUN NN Number=Sing _ _ _ _ 6 transduction transduction NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 10 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 alpha alpha NOUN NN Number=Sing _ _ _ _ 28 release release NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 8697 # text = Previous studies have implicated activation of both protein kinase C (PKC) and protein tyrosine kinases (PTK) in LPS-induced NF-kappaB activation and TNF-alpha production. 1 Previous previous ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 implicated implicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 both both DET DT _ _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 kinase kinase NOUN NN Number=Sing _ _ _ _ 10 C C PROPN NNP Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 17 kinases kinase NOUN NNS Number=Plur _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 PTK PTK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 alpha alpha NOUN NN Number=Sing _ _ _ _ 33 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 8698 # text = We hypothesized that inhibition of either PKC or PTK would decrease LPS-induced NF-kappaB DNA binding and TNF-alpha release in human monocytes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 hypothesized hypothesize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 either either CCONJ CC _ _ _ _ _ 7 PKC PKC PROPN NNP Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 PTK PTK PROPN NNP Number=Sing _ _ _ _ 10 would would AUX MD VerbForm=Fin _ _ _ _ 11 decrease decrease VERB VB VerbForm=Inf _ _ _ _ 12 LPS LPS ADV RB _ _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 18 DNA dna NOUN NN Number=Sing _ _ _ _ 19 binding binding NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 release release NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 8699 # text = MATERIALS AND METHODS: Human monocytes were stimulated with PMA (50 ng/ml) alone or LPS (100 ng/ml) with and without a nonspecific serine/threonine protein kinase inhibitor staurosporine (Stauro), a specific pan-PKC inhibitor bisindolylmaleimide (Bis), or an inhibitor of PTK genistein (Gen). 1 MATERIALS material NOUN NNS Number=Plur _ _ _ _ 2 AND and CCONJ CC _ _ _ _ _ 3 METHODS method NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ 5 Human human ADJ JJ Degree=Pos _ _ _ _ 6 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 PMA PMA PROPN NNP Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 50 50 NUM CD NumType=Card _ _ _ _ 13 ng ng NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 ml ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 alone alone ADJ JJ Degree=Pos _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 LPS LPS NOUN NNS Number=Plur _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 100 100 NUM CD NumType=Card _ _ _ _ 22 ng/ ng/ PUNCT HYPH _ _ _ _ SpaceAfter=No 23 ml ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 without without ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 nonspecific nonspecific ADJ JJ Degree=Pos _ _ _ _ 30 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 / / PUNCT , _ _ _ _ SpaceAfter=No 32 threonine threonine NUM CD NumType=Card _ _ _ _ 33 protein protein NOUN NN Number=Sing _ _ _ _ 34 kinase kinase NOUN NN Number=Sing _ _ _ _ 35 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 36 staurosporine staurosporine NOUN NN Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 Stauro Stauro PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 specific specific ADJ JJ Degree=Pos _ _ _ _ 43 pan pan NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 PKC Pkc NOUN NN Number=Sing _ _ _ _ 46 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 47 bisindolylmaleimide bisindolylmaleimide NOUN NN Number=Sing _ _ _ _ 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 Bis Bis PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 51 , , PUNCT , _ _ _ _ _ 52 or or CCONJ CC _ _ _ _ _ 53 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 54 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 55 of of ADP IN _ _ _ _ _ 56 PTK PTK PROPN NNP Number=Sing _ _ _ _ 57 genistein genistein PROPN NNP Number=Sing _ _ _ _ 58 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 59 Gen Gen PROPN NNP Number=Sing _ _ _ SpaceAfter=No 60 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ _ # sent_id = 8700 # text = TNF-alpha release in culture supernatants was measured by an ELISA. 1 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 alpha alpha NOUN NN Number=Sing _ _ _ _ 4 release release NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 culture culture NOUN NN Number=Sing _ _ _ _ 7 supernatants supernatant NOUN NNS Number=Plur _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 measured measure VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 ELISA ELISa NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 8701 # text = NF-kappaB DNA binding was evaluated by electrophoretic mobility shift assay. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ _ 5 binding binding VERB VBG VerbForm=Ger _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 evaluated evaluate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 10 mobility mobility NOUN NN Number=Sing _ _ _ _ 11 shift shift NOUN NN Number=Sing _ _ _ _ 12 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 8702 # text = RESULTS: LPS increased NF-kappaB DNA binding and TNF-alpha release in human monocytes. 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 LPS Lp NOUN NNS Number=Plur _ _ _ _ 4 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 DNA dna NOUN NN Number=Sing _ _ _ _ 9 binding binding NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 release release NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 8703 # text = Nonspecific protein kinase inhibition inhibited NF-kappaB activation and TNF-alpha release, while specific PKC inhibition with Bis had no effect on LPS-induced NF-kappaB DNA binding or TNF-alpha release. 1 Nonspecific Nonspecific ADJ JJ Degree=Pos _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 kinase kinase NOUN NN Number=Sing _ _ _ _ 4 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 5 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 release release NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 while while SCONJ IN _ _ _ _ _ 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 PKC Pkc NOUN NN Number=Sing _ _ _ _ 19 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 Bis Bis PROPN NNP Number=Sing _ _ _ _ 22 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 no no DET DT _ _ _ _ _ 24 effect effect NOUN NN Number=Sing _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 32 DNA dna NOUN NN Number=Sing _ _ _ _ 33 binding binding NOUN NN Number=Sing _ _ _ _ 34 or or CCONJ CC _ _ _ _ _ 35 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 alpha alpha NOUN NN Number=Sing _ _ _ _ 38 release release NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 8704 # text = PTK inhibition with Gen attenuated both LPS-induced NF-kappaB DNA binding and TNF-alpha production in human monocytes. 1 PTK Ptk NOUN NN Number=Sing _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 Gen Gen PROPN NNP Number=Sing _ _ _ _ 5 attenuated attenuate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 both both CCONJ CC _ _ _ _ _ 7 LPS Lps NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 DNA dna NOUN NN Number=Sing _ _ _ _ 14 binding binding NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 alpha alpha NOUN NN Number=Sing _ _ _ _ 19 production production NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 8705 # text = Direct activation of PKC with PMA induced both NF-kappaB activation and TNF-alpha production by human monocytes. 1 Direct direct ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 PKC PKC PROPN NNP Number=Sing _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 PMA PMA PROPN NNP Number=Sing _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 both both CCONJ CC _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 production production NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 8706 # text = CONCLUSIONS: 1 CONCLUSIONS conclusion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 8707 # text = These results suggest that LPS-induced NF-kappaB activation and TNF-alpha release in human monocytes are independent of PKC activity. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 alpha alpha NOUN NN Number=Sing _ _ _ _ 16 release release NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 independent independent ADJ JJ Degree=Pos _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 PKC PKC ADJ JJ Degree=Pos _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8708 # text = Furthermore, our results provide evidence that PTK plays a role in LPS-induced NF-kappaB activation and TNF-alpha release in human monocytes and thus could be a potential therapeutic target in inflammatory states. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 evidence evidence NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 PTK PTK PROPN NNP Number=Sing _ _ _ _ 9 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 release release NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 thus thus ADV RB _ _ _ _ _ 30 could could AUX MD VerbForm=Fin _ _ _ _ 31 be be AUX VB VerbForm=Inf _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 potential potential ADJ JJ Degree=Pos _ _ _ _ 34 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 35 target target NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 38 states state NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 8709 # text = Copyright 1999 Academic Press. 1 Copyright copyright NOUN NN Number=Sing _ _ _ _ 2 1999 1999 NUM CD NumType=Card _ _ _ _ 3 Academic academic PROPN NNP Number=Sing _ _ _ _ 4 Press. Press. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8710 # text = Document 0030011545 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011545 0030011545 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8711 # text = Functional characterization of novel IL-2 transcriptional inhibitors. 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 characterization characterization NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 novel novel NOUN NN Number=Sing _ _ _ _ 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT : _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8712 # text = IL-2-mediated T cell proliferation is a critical early event in the inflammatory process. 1 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 critical critical ADJ JJ Degree=Pos _ _ _ _ 12 early early ADJ JJ Degree=Pos _ _ _ _ 13 event event NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 17 process process NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 8713 # text = Formation of the NFAT-1 transcriptional complex on the IL-2 promoter is essential for IL-2 transcription. 1 Formation Formation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 NFAT NFAT NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 8 complex complex NOUN NN Number=Sing _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 essential essential ADJ JJ Degree=Pos _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 8714 # text = Using a cell line that is stably transfected with a trimer of the NFAT-1 regulatory element linked to a lac-Z reporter gene, we screened for inhibitors of NFAT-1-mediated beta-galactosidase activity. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 line line NOUN NN Number=Sing _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 stably stably ADV RB _ _ _ _ _ 8 transfected transfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 trimer trimer NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 NFAT Nfat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 18 element element NOUN NN Number=Sing _ _ _ _ 19 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 lac lac NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 Z Z NOUN NN Number=Sing _ _ _ _ 25 reporter reporter NOUN NN Number=Sing _ _ _ _ 26 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 29 screened screen VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 galactosidase galactosidase NOUN NN Number=Sing _ _ _ _ 41 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 8715 # text = WIN 61058 and WIN 53071 were identified as microM inhibitors. 1 WIN win VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 61058 61058 NUM CD NumType=Card _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 WIN win VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 5 53071 53071 NUM CD NumType=Card _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 microM microm ADJ JJ Degree=Pos _ _ _ _ 10 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 8716 # text = These compounds also inhibited beta-galactosidase mRNA levels. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 compounds compound NOUN NNS Number=Plur _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 galactosidase galactosidase NOUN NN Number=Sing _ _ _ _ 8 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 9 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 8717 # text = Similar inhibition of NFAT-1-mediated gene expression was observed in a second cell line, which is stably transfected with NFAT-1 regulatory elements linked to the reporter gene for sCD8. 1 Similar similar ADJ JJ Degree=Pos _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 stably stably ADV RB _ _ _ _ _ 22 transfected transfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 28 elements element NOUN NNS Number=Plur _ _ _ _ 29 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 reporter reporter NOUN NN Number=Sing _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ _ 34 for for ADP IN _ _ _ _ _ 35 sCD8 sCD8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 8718 # text = At 10 microM, both compounds inhibited IL-2 mRNA and protein levels in the NFAT-1-linked lac-Z transfectants, and in human lymphocytes. 1 At at ADP IN _ _ _ _ _ 2 10 10 NUM CD NumType=Card _ _ _ _ 3 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 both both DET DT _ _ _ _ _ 6 compounds compound NOUN NNS Number=Plur _ _ _ _ 7 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 levels level NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 NFAT NFAT NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 lac lac NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 Z z NOUN NN Number=Sing _ _ _ _ 25 transfectants transfectant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 8719 # text = Both compounds inhibited the mixed lymphocyte reaction, and this inhibition was reversed by exogenous IL-2. 1 Both both DET DT _ _ _ _ _ 2 compounds compound NOUN NNS Number=Plur _ _ _ _ 3 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 mixed mix ADJ JJ Degree=Pos _ _ _ _ 6 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 7 reaction reaction NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 reversed reverse VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 16 IL il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 8720 # text = WIN 53071 inhibited IL-2 production induced in the calcium-dependent PMA and ionomycin pathway. 1 WIN win VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 53071 53071 NUM CD NumType=Card _ _ _ _ 3 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 production production NOUN NN Number=Sing _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 14 PMA Pma PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 ionomycin ionomycin ADJ JJ Degree=Pos _ _ _ _ 17 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 8721 # text = Conversely, calcium-independent anti-CD28 1 Conversely Conversely ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 calcium- calcium- SYM NFP _ _ _ _ SpaceAfter=No 4 independent independent ADJ JJ Degree=Pos _ _ _ _ 5 anti-CD28 anti-cd28 NOUN NN Number=Sing _ _ _ _ # sent_id = 8722 # text = Ab and PMA-induced IL-2 production was resistant. 1 Ab Ab PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 production production NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 resistant resistant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 8723 # text = Both compounds altered the NFAT-1 transcriptional complex, causing its retarded mobility on gels. 1 Both both DET DT _ _ _ _ _ 2 compounds compound NOUN NNS Number=Plur _ _ _ _ 3 altered alter VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 NFAT NFAT NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 causing cause VERB VBG VerbForm=Ger _ _ _ _ 12 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 retarded retarded ADJ JJ Degree=Pos _ _ _ _ 14 mobility mobility NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 gels gel NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 8724 # text = By these functional criteria, we believe we have identified two structurally distinct, novel inhibitors of NFAT-1-mediated transcription. 1 By by ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 functional functional ADJ JJ Degree=Pos _ _ _ _ 4 criteria criterion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 believe believe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 9 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 two two NUM CD NumType=Card _ _ _ _ 12 structurally structurally ADV RB _ _ _ _ _ 13 distinct distinct ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 novel novel ADJ JJ Degree=Pos _ _ _ _ 16 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8725 # text = Document 0030011546 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011546 0030011546 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8726 # text = Inhibition of HIV-1 replication by combination of a novel inhibitor of TNF-alpha with AZT. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 replication replication NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 combination combination NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 novel novel NOUN NN Number=Sing _ _ _ _ 12 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 AZT AZT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8727 # text = The small molecule S9a was derived from an established tumor necrosis factor-alpha (TNF-alpha) inhibitor (Canventol) by replacement of the isopropylidine group with a phenyl ring. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 small small ADJ JJ Degree=Pos _ _ _ _ 3 molecule molecule NOUN NN Number=Sing _ _ _ _ 4 S9 s9 NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 derived derive VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 established establish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 tumor tumor NOUN NN Number=Sing _ _ _ _ 12 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 alpha alpha NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 Canventol Canventol PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 replacement replacement NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 isopropylidine isopropylidine NOUN NN Number=Sing _ _ _ _ 30 group group NOUN NN Number=Sing _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 phenyl phenyl NOUN NN Number=Sing _ _ _ _ 34 ring ring NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 8728 # text = S9a at 10 to 100 nM inhibited HIV production as potently as 3'-azido-3'-deoxythymidine (AZT), an inhibitor of viral reverse transcriptase. 1 S9a S9a NOUN NN Number=Sing _ _ _ _ 2 at at ADP IN _ _ _ _ _ 3 10 10 NUM CD NumType=Card _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 100 100 NUM CD NumType=Card _ _ _ _ 6 nM nm PROPN NNP Number=Sing _ _ _ _ 7 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 HIV Hiv PROPN NNP Number=Sing _ _ _ _ 9 production production NOUN NN Number=Sing _ _ _ _ 10 as as ADV RB _ _ _ _ _ 11 potently potently ADV RB _ _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 azido azido NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 deoxythymidine deoxythymidine NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 AZT AZT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 viral viral ADJ JJ Degree=Pos _ _ _ _ 30 reverse reverse NOUN NN Number=Sing _ _ _ _ 31 transcriptase transcriptase NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 8729 # text = Furthermore, S9a and AZT in combination, at noncytoxic concentrations strongly inhibited HIV-1 replication that was more than additive and substantially prolonged the appearance of virus both in acutely infected CD4+ lymphocytes (SupT) in culture and in peripheral blood mononuclear cells (PBMCs) infected with a primary HIV-1 isolate. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 S9 S9 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 a a NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 AZT AZT NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 combination combination NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 at at ADP IN _ _ _ _ _ 11 noncytoxic noncytoxic ADJ JJ Degree=Pos _ _ _ _ 12 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 13 strongly strongly ADV RB _ _ _ _ _ 14 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 replication replication NOUN NN Number=Sing _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 more more ADJ JJR Degree=Cmp _ _ _ _ 22 than than ADP IN _ _ _ _ _ 23 additive additive ADJ JJ Degree=Pos _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 substantially substantially ADV RB _ _ _ _ _ 26 prolonged prolonge VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 appearance appearance NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 virus virus NOUN NN Number=Sing _ _ _ _ 31 both both CCONJ CC _ _ _ _ _ 32 in in ADV RB _ _ _ _ _ 33 acutely acutely ADV RB _ _ _ _ _ 34 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 CD4 Cd4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 + + SYM SYM _ _ _ _ _ 37 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 SupT SupT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 culture culture NOUN NN Number=Sing _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 46 blood blood NOUN NN Number=Sing _ _ _ _ 47 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 48 cells cell NOUN NNS Number=Plur _ _ _ _ 49 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 50 PBMCs PBMC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ _ 52 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 53 with with ADP IN _ _ _ _ _ 54 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 55 primary primary ADJ JJ Degree=Pos _ _ _ _ 56 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 1 1 NUM CD NumType=Card _ _ _ _ 59 isolate isolate NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 8730 # text = S9a inhibited TNF-alpha promoter-driven reporter gene activity. 1 S9 S9 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 reporter reporter NOUN NN Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 8731 # text = It was proposed that the mechanism of antiviral action of S9a was on the host cell, by blocking TNF-alpha transcription via a Tat-induced tar-independent loop, which decreases downstream NF-kappaB activation of HIV-1 long terminal repeat (LTR). 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 proposed propose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 antiviral antiviral ADJ JJ Degree=Pos _ _ _ _ 9 action action NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 S9 s9 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 host host NOUN NN Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 by by SCONJ IN _ _ _ _ _ 20 blocking block VERB VBG VerbForm=Ger _ _ _ _ 21 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 via via ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 Tat Tat NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 tar- tar- SYM SYM _ _ _ _ SpaceAfter=No 31 independent independent ADJ JJ Degree=Pos _ _ _ _ 32 loop loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 which which PRON WDT PronType=Rel _ _ _ _ 35 decreases decrease VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 37 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 40 activation activation NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 1 1 NUM CD NumType=Card _ _ _ _ 45 long long ADJ JJ Degree=Pos _ _ _ _ 46 terminal terminal NOUN NN Number=Sing _ _ _ _ 47 repeat repeat NOUN NN Number=Sing _ _ _ _ 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 8732 # text = S9a was superior to the first generation compound Canventol, which was superior to the natural compound sarcophytol A, demonstrating that further structure-based enhancement of potency of these compounds is feasible. 1 S9 S9 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 superior superior ADJ JJ Degree=Pos _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 8 generation generation NOUN NN Number=Sing _ _ _ _ 9 compound compound NOUN NN Number=Sing _ _ _ _ 10 Canventol Canventol PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 superior superior ADJ JJ Degree=Pos _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 natural natural ADJ JJ Degree=Pos _ _ _ _ 18 compound compound NOUN NN Number=Sing _ _ _ _ 19 sarcophytol sarcophytol NOUN NN Number=Sing _ _ _ _ 20 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 demonstrating demonstrate VERB VBG VerbForm=Ger _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 further further ADJ JJ Degree=Pos _ _ _ _ 25 structure structure NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 potency potency NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 33 compounds compound NOUN NNS Number=Plur _ _ _ _ 34 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 feasible feasible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 8733 # text = This study suggests a therapeutic approach against AIDS by application of two drugs, one against a cellular and the other a viral target, which may provide an approach to the problem of frequent emergence of resistant variants to combinations of drugs that target only HIV genes. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 6 approach approach NOUN NN Number=Sing _ _ _ _ 7 against against ADP IN _ _ _ _ _ 8 AIDS aids NOUN NNS Number=Plur _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 application application NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 two two NUM CD NumType=Card _ _ _ _ 13 drugs drug NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 one one NUM CD NumType=Card _ _ _ _ 16 against against ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 cellular cellular NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 other other ADJ JJ Degree=Pos _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 viral viral ADJ JJ Degree=Pos _ _ _ _ 24 target target NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 which which PRON WDT PronType=Rel _ _ _ _ 27 may may AUX MD VerbForm=Fin _ _ _ _ 28 provide provide VERB VB VerbForm=Inf _ _ _ _ 29 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 approach approach NOUN NN Number=Sing _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 problem problem NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 frequent frequent ADJ JJ Degree=Pos _ _ _ _ 36 emergence emergence NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 39 variants variant NOUN NNS Number=Plur _ _ _ _ 40 to to ADP IN _ _ _ _ _ 41 combinations combination NOUN NNS Number=Plur _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 drugs drug NOUN NNS Number=Plur _ _ _ _ 44 that that PRON WDT PronType=Rel _ _ _ _ 45 target target VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 46 only only ADV RB _ _ _ _ _ 47 HIV HIV NOUN NN Number=Sing _ _ _ _ 48 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8734 # text = Document 0030011547 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011547 0030011547 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8735 # text = Differentiation of U-937 promonocytic cells by etoposide and ICRF-193, two antitumour DNA topoisomerase II inhibitors with different mechanisms of action. 1 Differentiation Differentiation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 937 937 NUM CD NumType=Card _ _ _ _ 6 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 etoposide etoposide NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 ICRF Icrf NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 193 193 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 two two NUM CD NumType=Card _ _ _ _ 16 antitumour antitumour NUM CD NumType=Card _ _ _ _ 17 DNA dna NOUN NN Number=Sing _ _ _ _ 18 topoisomerase topoisomerase NOUN NN Number=Sing _ _ _ _ 19 II ii NUM CD NumType=Card _ _ _ _ 20 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 different different ADJ JJ Degree=Pos _ _ _ _ 23 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 action action NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8736 # text = We have compared the action on U-937 human promonocytic leukemia cells of two DNA topoisomerase II inhibitors, namely the epipodophyllotoxin etoposide and the bisdioxopiperazine ICRF-193. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 action action NOUN NN Number=Sing _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 937 937 NUM CD NumType=Card _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 12 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 two two NUM CD NumType=Card _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ _ 17 topoisomerase topoisomerase NOUN NN Number=Sing _ _ _ _ 18 II ii NUM CD NumType=Card _ _ _ _ 19 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 namely namely ADV RB _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 epipodophyllotoxin epipodophyllotoxin ADJ JJ Degree=Pos _ _ _ _ 24 etoposide etoposide NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 bisdioxopiperazine bisdioxopiperazine NOUN NN Number=Sing _ _ _ _ 28 ICRF Icrf NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 193 193 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 8737 # text = One hour pulse-treatment with 3 microM etoposide caused topoisomerase associated, primary DNA breakage, which was rapidly followed by apoptosis. 1 One one NUM CD NumType=Card _ _ _ _ 2 hour hour NOUN NN Number=Sing _ _ _ _ 3 pulse pulse NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 -treatment -treatment NOUN NN Number=Sing _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 3 3 NUM CD NumType=Card _ _ _ _ 7 microM microm NUM CD NumType=Card _ _ _ _ 8 etoposide etoposide NOUN NN Number=Sing _ _ _ _ 9 caused cause VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 topoisomerase topoisomerase NOUN NN Number=Sing _ _ _ _ 11 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 primary primary ADJ JJ Degree=Pos _ _ _ _ 14 DNA dna NOUN NN Number=Sing _ _ _ _ 15 breakage breakage NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 rapidly rapidly ADV RB _ _ _ _ _ 20 followed follow VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 8738 # text = By contrast, these effects were not observed upon pulse-treatment with 6 microM ICRF-193. 1 By by ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 upon upon ADP IN _ _ _ _ _ 10 pulse pulse NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 treatment treatment NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 6 6 NUM CD NumType=Card _ _ _ _ 15 microM microm NUM CD NumType=Card _ _ _ _ 16 ICRF ICRF NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - SYM SYM _ _ _ _ SpaceAfter=No 18 193 193 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 8739 # text = However, continuous treatments with subcytotoxic concentrations of etoposide (0.15 microM) and ICRF-193 (0.3 microM) produced several similar effects, namely decreased cell proliferation, accumulation of cells at G2, increase in cell mass, and induction of differentiation. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 continuous continuous ADJ JJ Degree=Pos _ _ _ _ 4 treatments treatment NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 subcytotoxic subcytotoxic ADJ JJ Degree=Pos _ _ _ _ 7 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 etoposide etoposide NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 0.15 0.15 NUM CD NumType=Card _ _ _ _ 12 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 ICRF ICRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 193 193 NUM CD NumType=Card _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 0.3 0.3 NUM CD NumType=Card _ _ _ _ 20 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 produced produce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 several several ADJ JJ Degree=Pos _ _ _ _ 24 similar similar ADJ JJ Degree=Pos _ _ _ _ 25 effects effect NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 namely namely ADV RB _ _ _ _ _ 28 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ _ 35 at at ADP IN _ _ _ _ _ 36 G2 g2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 increase increase NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 mass mass NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 induction induction NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 8740 # text = Under these conditions, etoposide produced a biphasic activation of protein kinase C, which consisted in an early transient activation (from hours 1 to 6) of the membrane-bound enzyme followed by a later activation (hour 48) of the total, membrane-bound and cytosolic enzyme. 1 Under under ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 etoposide etoposide ADV RB _ _ _ _ _ 6 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 biphasic biphasic ADJ JJ Degree=Pos _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 kinase kinase NOUN NN Number=Sing _ _ _ _ 13 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 consisted consist VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 early early ADJ JJ Degree=Pos _ _ _ _ 20 transient transient NOUN NN Number=Sing _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 from from ADP IN _ _ _ _ _ 24 hours hour NOUN NNS Number=Plur _ _ _ _ 25 1 1 NUM CD NumType=Card _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 membrane membrane NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 bound bound ADJ JJ Degree=Pos _ _ _ _ 34 enzyme enzyme NOUN NN Number=Sing _ _ _ _ 35 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 later later ADJ JJR Degree=Cmp _ _ _ _ 39 activation activation NOUN NN Number=Sing _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 hour hour NOUN NN Number=Sing _ _ _ _ 42 48 48 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 total total ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 membrane membrane ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 49 -bound -bound ADJ JJ Degree=Pos _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 52 enzyme enzyme NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 8741 # text = By contrast, ICRF-193 only provoked a late activation (from hours 72 to 96) of the total enzyme. 1 By by ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 ICRF ICRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 193 193 NUM CD NumType=Card _ _ _ _ 7 only only ADV RB _ _ _ _ _ 8 provoked provoke VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 late late ADJ JJ Degree=Pos _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 from from ADP IN _ _ _ _ _ 14 hours hour NOUN NNS Number=Plur _ _ _ _ 15 72 72 NUM CD NumType=Card _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 96 96 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 total total ADJ JJ Degree=Pos _ _ _ _ 22 enzyme enzyme NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 8742 # text = When used at differentiation-inducing concentrations, both topoisomerase inhibitors caused a great stimulation of AP-1 binding activity, with maximum value at hour 12 in etoposide-treated cells and at hour 48 in ICRF-193-treated cells. 1 When when ADV WRB PronType=Int _ _ _ _ 2 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 at at ADP IN _ _ _ _ _ 4 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 inducing inducing NOUN NN Number=Sing _ _ _ _ 7 concentrations concentration NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 both both CCONJ CC _ _ _ _ _ 10 topoisomerase topoisomerase NOUN NN Number=Sing _ _ _ _ 11 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 12 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 great great ADJ JJ Degree=Pos _ _ _ _ 15 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 binding bind VERB VBG VerbForm=Ger _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 maximum maximum ADJ JJ Degree=Pos _ _ _ _ 25 value value NOUN NN Number=Sing _ _ _ _ 26 at at ADP IN _ _ _ _ _ 27 hour hour NOUN NN Number=Sing _ _ _ _ 28 12 12 NUM CD NumType=Card _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 etoposide etoposide ADV RB _ _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 treated treated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 at at ADP IN _ _ _ _ _ 36 hour hour NOUN NN Number=Sing _ _ _ _ 37 48 48 NUM CD NumType=Card _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 ICRF ICRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 193 193 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 8743 # text = By contrast, the binding activity of the NF-kappa(B) and EGR-1 transcription factors was little affected. 1 By by ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 binding bind VERB VBG VerbForm=Ger _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 EGR EGR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 factors factor NOUN NNS Number=Plur _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 little little ADV RB Degree=Pos _ _ _ _ 23 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 8744 # text = It is concluded that topoisomerase II inhibitors may induce the differentiation of promonocytic cells, independently of their capacity to cause DNA strand breaks. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 concluded conclude VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 topoisomerase topoisomerase NOUN NN Number=Sing _ _ _ _ 6 II ii NUM CD NumType=Card _ _ _ _ 7 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 8 may may AUX MD VerbForm=Fin _ _ _ _ 9 induce induce VERB VB VerbForm=Inf _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 independently independently ADV RB _ _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 capacity capacity NOUN NN Number=Sing _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 cause cause VERB VB VerbForm=Inf _ _ _ _ 22 DNA dna NOUN NN Number=Sing _ _ _ _ 23 strand strand NOUN NN Number=Sing _ _ _ _ 24 breaks break NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8745 # text = However, there are other effects, such as the early activation of protein kinase C, which are probably derived from the production of primary DNA breakage by some anti-topoisomerase drugs. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 there there PRON EX _ _ _ _ _ 4 are be VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 other other ADJ JJ Degree=Pos _ _ _ _ 6 effects effect NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 such such ADJ JJ Degree=Pos _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 early early ADJ JJ Degree=Pos _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 kinase kinase NOUN NN Number=Sing _ _ _ _ 16 C c PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 probably probably ADV RB _ _ _ _ _ 21 derived derive VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 production production NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 primary primary ADJ JJ Degree=Pos _ _ _ _ 27 DNA dna NOUN NN Number=Sing _ _ _ _ 28 breakage breakage NOUN NN Number=Sing _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 some some DET DT _ _ _ _ _ 31 anti-topoisomerase anti-topoisomerase ADJ JJ Degree=Pos _ _ _ _ 32 drugs drug NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8746 # text = Document 0030011549 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011549 0030011549 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8747 # text = Oct2 transactivation from a remote enhancer position requires a B-cell-restricted activity. 1 Oct2 Oct2 NUM CD NumType=Card _ _ _ _ 2 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 remote remote ADJ JJ Degree=Pos _ _ _ _ 6 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 7 position position NOUN NN Number=Sing _ _ _ _ 8 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8748 # text = Previous cotransfection experiments had demonstrated that ectopic expression of the lymphocyte-specific transcription factor Oct2 could efficiently activate a promoter containing an octamer motif. 1 Previous previous ADJ JJ Degree=Pos _ _ _ _ 2 cotransfection cotransfection NOUN NN Number=Sing _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ _ 4 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 ectopic ectopic ADJ JJ Degree=Pos _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 Oct2 oct2 NOUN NN Number=Sing _ _ _ _ 17 could could AUX MD VerbForm=Fin _ _ _ _ 18 efficiently efficiently ADV RB _ _ _ _ _ 19 activate activate VERB VB VerbForm=Inf _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 containing contain VERB VBG VerbForm=Ger _ _ _ _ 23 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 octamer octamer ADJ JJ Degree=Pos _ _ _ _ 25 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 8749 # text = Oct2 expression was unable to stimulate a multimerized octamer enhancer element in HeLa cells, however. 1 Oct2 Oct2 NUM CD NumType=Card _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 unable unable ADJ JJ Degree=Pos _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 multimerized multimerize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 octamer octamer NOUN NN Number=Sing _ _ _ _ 10 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 11 element element NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 however however ADV RB _ _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 8750 # text = We have tested a variety of Oct2 isoforms generated by alternative splicing for the capability to activate an octamer enhancer in nonlymphoid cells and a B-cell line. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 variety variety NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Oct2 Oct2 NUM CD NumType=Card _ _ _ _ 8 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 9 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 12 splicing splicing NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 capability capability NOUN NN Number=Sing _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 activate activate VERB VB VerbForm=Inf _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 octamer octamer ADJ JJ Degree=Pos _ _ _ _ 20 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 nonlymphoid nonlymphoid ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 8751 # text = Our analyses show that several Oct2 isoforms can stimulate from a remote position but that this stimulation is restricted to B cells. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 analyses analysis NOUN NNS Number=Plur _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 several several ADJ JJ Degree=Pos _ _ _ _ 6 Oct2 Oct2 NUM CD NumType=Card _ _ _ _ 7 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 remote remote ADJ JJ Degree=Pos _ _ _ _ 13 position position NOUN NN Number=Sing _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 17 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 restricted restrict VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 B b ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 8752 # text = This result indicates the involvement of either a B-cell-specific cofactor or a specific modification of a cofactor or the Oct2 protein in Oct2-mediated enhancer activation. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 result result NOUN NN Number=Sing _ _ _ _ 3 indicates indicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 involvement involvement NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 either either CCONJ CC _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 cofactor cofactor NOUN NN Number=Sing _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 modification modification NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 cofactor cofactor NOUN NN Number=Sing _ _ _ _ 21 or or CCONJ CC _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 Oct2 Oct2 NUM CD NumType=Card _ _ _ _ 24 protein protein NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 Oct2 Oct2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - PUNCT : _ _ _ _ SpaceAfter=No 28 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 8753 # text = Mutational analyses indicate that the carboxy-terminal domain of Oct2 is critical for enhancer activation. 1 Mutational Mutational ADJ JJ Degree=Pos _ _ _ _ 2 analyses analysis NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 carboxy carboxy NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 terminal terminal NOUN NN Number=Sing _ _ _ _ 9 domain domain NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 Oct2 Oct2 NUM CD NumType=Card _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 critical critical ADJ JJ Degree=Pos _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 8754 # text = Moreover, this domain conferred enhancing activity when fused to the Oct1 protein, which by itself was unable to stimulate from a remote position. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 domain domain NOUN NN Number=Sing _ _ _ _ 5 conferred confer VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 enhancing enhance VERB VBG VerbForm=Ger _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 when when ADV WRB PronType=Int _ _ _ _ 9 fused fuse ADJ JJ Degree=Pos _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 Oct1 Oct1 PROPN NNP Number=Sing _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 itself itself PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs|Reflex=Yes _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 unable unable ADJ JJ Degree=Pos _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 remote remote ADJ JJ Degree=Pos _ _ _ _ 25 position position NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 8755 # text = The glutamine-rich activation domain present in the amino-terminal portion of Oct2 and the POU domain contribute only marginally to the transactivation function from a distal position. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 glutamine glutamine NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 rich rich ADJ JJ Degree=Pos _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 domain domain NOUN NN Number=Sing _ _ _ _ 7 present present ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 amino amino NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 13 portion portion NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 Oct2 Oct2 NUM CD NumType=Card _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 POU POU NOUN NN Number=Sing _ _ _ _ 19 domain domain NOUN NN Number=Sing _ _ _ _ 20 contribute contribute NOUN NN Number=Sing _ _ _ _ 21 only only ADV RB _ _ _ _ _ 22 marginally marginally ADV RB _ _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 26 function function NOUN NN Number=Sing _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 distal distal ADJ JJ Degree=Pos _ _ _ _ 30 position position NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8756 # text = Document 0030011551 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011551 0030011551 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8757 # text = Effect of adenovirus 2 on cellular gene activation in blood-derived monocytes and macrophages. 1 Effect effect NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 adenovirus adenovirus NOUN NN Number=Sing _ _ _ _ 4 2 2 NUM CD NumType=Card _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 blood blood NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8758 # text = We have investigated the effect of adenovirus 2 (Ad2) infection on human monocytes and monocyte-derived macrophages with regard to expression of TNF-alpha and IL-1 beta. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 adenovirus adenovirus NOUN NN Number=Sing _ _ _ _ 8 2 2 NUM CD NumType=Card _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 Ad2 Ad2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 infection infection NOUN NN Number=Sing _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 regard regard NOUN NN Number=Sing _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 alpha alpha PROPN NNP Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ _ 33 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 8759 # text = In monocytes, the virus was bound to the surface without being internalized. 1 In in ADP IN _ _ _ _ _ 2 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 bound bound ADJ JJ Degree=Pos _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 surface surface NOUN NN Number=Sing _ _ _ _ 11 without without SCONJ IN _ _ _ _ _ 12 being be AUX VBG VerbForm=Ger _ _ _ _ 13 internalized internalize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 8760 # text = On the other hand, Ad2 was internalized by macrophages. 1 On on ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 hand hand NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 Ad2 ad2 NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 internalized internalize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 8761 # text = No virus replication and no transcription of the Ad2 early genes was observed in either of the cells. 1 No no DET DT _ _ _ _ _ 2 virus virus NOUN NN Number=Sing _ _ _ _ 3 replication replication NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 no no DET DT _ _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 Ad2 Ad2 NUM CD NumType=Card _ _ _ _ 10 early early ADJ JJ Degree=Pos _ _ _ _ 11 genes gene NOUN NNS Number=Plur _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 either either DET DT _ _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 8762 # text = Ad2 infection induced transient increase in the mRNA levels for TNF-alpha and IL-1 beta in both monocytes and in macrophages, although the kinetics of the transcription was slightly different. 1 Ad2 Ad2 NUM CD NumType=Card _ _ _ _ 2 infection infection NOUN NN Number=Sing _ _ _ _ 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 transient transient ADJ JJ Degree=Pos _ _ _ _ 5 increase increase NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 9 levels level NOUN NNS Number=Plur _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 alpha alpha PROPN NNP Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 beta beta NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 both both DET DT _ _ _ _ _ 21 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 although although SCONJ IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ _ 32 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 33 slightly slightly ADV RB _ _ _ _ _ 34 different different ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 8763 # text = The production of both cytokines, measured by ELISA tests, was enhanced in monocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 production production NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 both both DET DT _ _ _ _ _ 5 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 measured measure VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 ELISA ELISA PROPN NNP Number=Sing _ _ _ _ 10 tests test NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 8764 # text = In macrophages, a slight enhancement of TNF-alpha production was seen, whereas IL-1 beta was not detected. 1 In in ADP IN _ _ _ _ _ 2 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 slight slight ADJ JJ Degree=Pos _ _ _ _ 6 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 production production NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 whereas whereas SCONJ IN _ _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 beta beta NOUN NN Number=Sing _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 8765 # text = The data indicate that cellular genes might be activated by Ad2 virus infection in nonpermissive cells where no viral gene products could be detected. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 6 genes gene NOUN NNS Number=Plur _ _ _ _ 7 might might AUX MD VerbForm=Fin _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 Ad2 Ad2 NUM CD NumType=Card _ _ _ _ 12 virus virus NOUN NN Number=Sing _ _ _ _ 13 infection infection NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 nonpermissive nonpermissive ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 where where ADV WRB PronType=Rel _ _ _ _ 18 no no DET DT _ _ _ _ _ 19 viral viral ADJ JJ Degree=Pos _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 products product NOUN NNS Number=Plur _ _ _ _ 22 could could AUX MD VerbForm=Fin _ _ _ _ 23 be be AUX VB VerbForm=Inf _ _ _ _ 24 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8766 # text = Document 0030011552 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011552 0030011552 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8767 # text = Characterization of an immediate-early gene induced in adherent monocytes that encodes I kappa B-like activity. 1 Characterization Characterization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 early early ADJ JJ Degree=Pos _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 adherent adherent ADJ JJ Degree=Pos _ _ _ _ 11 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 like like ADJ JJ Degree=Pos _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8768 # text = We have cloned a group of cDNAs representing mRNAs that are rapidly induced following adherence of human monocytes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 group group NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 cDNAs cDNA NOUN NNS Number=Plur _ _ _ _ 8 representing represent VERB VBG VerbForm=Ger _ _ _ _ 9 mRNAs mRNA NOUN NNS Number=Plur _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 rapidly rapidly ADV RB _ _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 following follow VERB VBG VerbForm=Ger _ _ _ _ 15 adherence adherence NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 8769 # text = One of the induced transcripts (MAD-3) encodes a protein of 317 amino acids with one domain containing five tandem repeats of the cdc10/ankyrin motif, which is 60% similar (46% identical) to the ankyrin repeat region of the precursor of NF-kappa B/KBF1 p50. 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 MAD mad PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 3 3 X LS _ _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 317 317 NUM CD NumType=Card _ _ _ _ 16 amino amino DET DT _ _ _ _ _ 17 acids acid NOUN NNS Number=Plur _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 one one NUM CD NumType=Card _ _ _ _ 20 domain domain NOUN NN Number=Sing _ _ _ _ 21 containing contain VERB VBG VerbForm=Ger _ _ _ _ 22 five five NUM CD NumType=Card _ _ _ _ 23 tandem tandem NOUN NN Number=Sing _ _ _ _ 24 repeats repeat NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 cdc10 cdc10 NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 / / PUNCT , _ _ _ _ SpaceAfter=No 29 ankyrin ankyrin NOUN NN Number=Sing _ _ _ _ 30 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 which which PRON WDT PronType=Rel _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 60 60 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 % % SYM NN Number=Sing _ _ _ _ 36 similar similar ADJ JJ Degree=Pos _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 46 46 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 % % SYM NN Number=Sing _ _ _ _ 40 identical identical ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 to to ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 ankyrin ankyrin NOUN NN Number=Sing _ _ _ _ 45 repeat repeat VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 46 region region NOUN NN Number=Sing _ _ _ _ 47 of of ADP IN _ _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 precursor precursor NOUN NN Number=Sing _ _ _ _ 50 of of ADP IN _ _ _ _ _ 51 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 kappa kappa PROPN NNP Number=Sing _ _ _ _ 54 B/KBF1 B/kbf1 PROPN NNP Number=Sing _ _ _ _ 55 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 8770 # text = The C-terminus has a putative protein kinase C phosphorylation site. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 C c NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 terminus terminus NOUN NN Number=Sing _ _ _ _ 5 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 putative putative ADJ JJ Degree=Pos _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 kinase kinase NOUN NN Number=Sing _ _ _ _ 10 C c NOUN NN Number=Sing _ _ _ _ 11 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 8771 # text = In vitro translated MAD-3 protein was found to specifically inhibit the DNA-binding activity of the p50/p65 NF-kappa B complex but not that of the p50/p50 KBF1 factor or of other DNA-binding proteins. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro ADP IN Typo=Yes _ _ _ _ 3 translated translate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 MAD mad NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 3 3 NUM CD NumType=Card _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 specifically specifically ADV RB _ _ _ _ _ 12 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 p65 p65 NUM CD NumType=Card _ _ _ _ 23 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 complex complex NOUN NN Number=Sing _ _ _ _ 28 but but CCONJ CC _ _ _ _ _ 29 not not PART RB _ _ _ _ _ 30 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 / / PUNCT , _ _ _ _ SpaceAfter=No 35 p50 p50 NUM CD NumType=Card _ _ _ _ 36 KBF1 KBF1 NUM CD NumType=Card _ _ _ _ 37 factor factor NOUN NN Number=Sing _ _ _ _ 38 or or CCONJ CC _ _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 other other ADJ JJ Degree=Pos _ _ _ _ 41 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 binding binding VERB VBG VerbForm=Ger _ _ _ _ 44 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 8772 # text = The MAD-3 cDNA encodes an I kappa B-like protein that is likely to be involved in regulation of transcriptional responses to NF-kappa B, including adhesion-dependent pathways of monocyte activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 MAD mad NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 3 3 NUM CD NumType=Card _ _ _ _ 5 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 6 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B benefit PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 like like ADJ JJ Degree=Pos _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 likely likely ADJ JJ Degree=Pos _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 involved involved VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 regulation regulation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 24 responses respons NOUN NNS Number=Plur _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 including include VERB VBG VerbForm=Ger _ _ _ _ 32 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 -dependent -dependent ADJ JJ Degree=Pos _ _ _ _ 34 pathways pathway NOUN NNS Number=Plur _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 37 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8773 # text = Document 0030011556 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011556 0030011556 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8774 # text = Inhibition of NF-kappa B activation in human T-cell lines by anetholdithiolthione. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 lines line NOUN NNS Number=Plur _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 anetholdithiolthione anetholdithiolthione NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8775 # text = Nuclear factor (NF)-kappa B is a redox sensitive cytosolic transcription factor. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 6 - - PUNCT : _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 redox redox NOUN NN Number=Sing _ _ _ _ 12 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 13 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 8776 # text = Redox regulation of NF-kappa B has been implicated in the activation of the human immuno-deficiency virus (HIV). 1 Redox Redox NOUN NN Number=Sing _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B B PROPN NNP Number=Sing _ _ _ _ 8 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 10 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 immuno immuno NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 -deficiency -deficiency NOUN NN Number=Sing _ _ _ _ 19 virus virus NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 8777 # text = Therefore, inhibition of NF-kappa B activation may be an effective strategy for acquired immunodeficiency syndrome therapy. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 may may AUX MD VerbForm=Fin _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 effective effective ADJ JJ Degree=Pos _ _ _ _ 14 strategy strategy NOUN NN Number=Sing _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 acquired acquire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 18 syndrome syndrome NOUN NN Number=Sing _ _ _ _ 19 therapy therapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 8778 # text = Anetholdithiolthione (ADT, 5-[p-methoxyphenyl]-3H-1,2-dithiol-3-thione) is an antioxidant which has been used to protect against acetaminophen- and CCl4-induced hepatotoxicity, lipid peroxidation, radiation injury, and also has been used clinically as an anti-choleretic agent. 1 Anetholdithiolthione Anetholdithiolthione PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 ADT ADT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 5-[ 5-[ PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 p-methoxyphenyl]-3H-1,2-dithiol p-methoxyphenyl]-3H-1,2-dithiol NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 -3 -3 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT : _ _ _ _ SpaceAfter=No 9 thione thione NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 antioxidant antioxidant NOUN NN Number=Sing _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 17 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 protect protect VERB VB VerbForm=Inf _ _ _ _ 20 against against ADP IN _ _ _ _ _ 21 acetaminophen acetaminophe ADV RB PronType=Dem _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 CCl4 Ccl4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 hepatotoxicity hepatotoxicity NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 lipid lipid ADJ JJ Degree=Pos _ _ _ _ 30 peroxidation peroxidation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 radiation radiation NOUN NN Number=Sing _ _ _ _ 33 injury injury NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 also also ADV RB _ _ _ _ _ 37 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 39 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 40 clinically clinically ADV RB _ _ _ _ _ 41 as as ADP IN _ _ _ _ _ 42 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 anti-choleretic anti-choleretic ADJ JJ Degree=Pos _ _ _ _ 44 agent agent NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 8779 # text = The present study examined the effect of ADT pretreatment on NF-kappa B activation in response to a variety of stimuli such as H2O2, phorbol myristate acetate (PMA) or tumor necrosis factor alpha (TNF alpha). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 effect effect NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 ADT Adt ADJ JJ Degree=Pos _ _ _ _ 9 pretreatment pretreatment NOUN NN Number=Sing _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 response response NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 variety variety NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 stimuli stimuli NOUN NNS Number=Plur _ _ _ _ 23 such such ADJ JJ Degree=Pos _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 H2 H2 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 O2 O2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 29 myristate myristate NOUN NN Number=Sing _ _ _ _ 30 acetate acetate NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 or or CCONJ CC _ _ _ _ _ 35 tumor tumor NOUN NN Number=Sing _ _ _ _ 36 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 37 factor factor NOUN NN Number=Sing _ _ _ _ 38 alpha alpha NOUN NN Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 TNF Tnf NOUN NN Number=Sing _ _ _ _ 41 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 8780 # text = PMA and TNF alpha induced activation of (NF)-kappa B in human Jurkat T-cells was partially inhibited by ADT (0.1 mM) pretreatment. 1 PMA PMA PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 TNF TNF PROPN NNP Number=Sing _ _ _ _ 4 alpha alpha ADV RB _ _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 17 T- t- SYM NFP _ _ _ _ SpaceAfter=No 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 partially partially ADV RB _ _ _ _ _ 21 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 ADT ADT PROPN NNP Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 0.1 0.1 NUM CD NumType=Card _ _ _ _ 26 mM mm NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 pretreatment pretreatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 8781 # text = ADT (0.1 mM) also inhibited H2O2 induced activation of the transcription factor in the peroxide sensitive human Wurzburg T-cells. 1 ADT ADT PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 0.1 0.1 NUM CD NumType=Card _ _ _ _ 4 mM mm NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 H2O2 H2O2 PART TO Abbr=Yes _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 peroxide peroxide NOUN NN Number=Sing _ _ _ _ 18 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 Wurzburg Wurzburg NOUN NN Number=Sing _ _ _ _ 21 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 8782 # text = Furthermore, ADT treated Wurzburg cells had significantly higher glutathione levels as compared with untreated cells. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 ADT ADT PROPN NNP Number=Sing _ _ _ _ 4 treated treat VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 Wurzburg Wurzburg PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 significantly significantly ADV RB _ _ _ _ _ 9 higher higher ADJ JJR Degree=Cmp _ _ _ _ 10 glutathione glutathione NOUN NN Number=Sing _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 untreated untreated ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 8783 # text = H2O2 induced lipid peroxidation in Wurzburg cells was remarkably inhibited by ADT pretreatment. 1 H2O2 H2O2 PART TO Abbr=Yes _ _ _ _ 2 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 lipid lipid ADJ JJ Degree=Pos _ _ _ _ 4 peroxidation peroxidation NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 Wurzburg Wurzburg PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 remarkably remarkably ADV RB _ _ _ _ _ 10 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 ADT Adt ADJ JJ Degree=Pos _ _ _ _ 13 pretreatment pretreatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 8784 # text = ADT, a pro-glutathione antioxidant, was observed to be capable of modulating NF-kappa B activation. 1 ADT ADT ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 pro-glutathione pro-glutathione ADJ JJ Degree=Pos _ _ _ _ 5 antioxidant antioxidant NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 capable capable ADJ JJ Degree=Pos _ _ _ _ 12 of of SCONJ IN _ _ _ _ _ 13 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8785 # text = Document 0030011564 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011564 0030011564 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8786 # text = Thrombopoietin supports in vitro erythroid differentiation via its specific receptor c-Mpl in a human leukemia cell line. 1 Thrombopoietin Thrombopoietin VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 supports support NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 vitro vitro NUM CD NumType=Card _ _ _ _ 5 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 6 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 7 via via ADP IN _ _ _ _ _ 8 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 Mpl Mpl NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8787 # text = Thrombopoietin (TPO) acts on megakaryopoiesis and erythropoiesis in vitro and in vivo. 1 Thrombopoietin Thrombopoietin PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 TPO TPO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 megakaryopoiesis megakaryopoiesis NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 erythropoiesis erythropoiesis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 vitro vitro NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 8788 # text = We isolated a novel subline, UT-7/GMT, from the human leukemia cell line UT-7/GM (N. Komatsu, et al., Blood, 89: 4021-4033, 1997). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 isolated isolate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 novel novel NOUN NN Number=Sing _ _ _ _ 5 subline subline NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 7/ 7ith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 10 GMT GMT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 line line NOUN NN Number=Sing _ _ _ _ 18 UT-7/GM UT-7/Gm PROPN NNP Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 N and PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ 22 Komatsu Komatsu PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 et et X FW _ _ _ _ _ 25 al. al. X FW _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 Blood Blood PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 89 89 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 : : PUNCT : _ _ _ _ _ 31 4021-4033 4021-4033 NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 1997 1997 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 8789 # text = A small population of UT-7/GM cells positively stained for hemoglobin 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 small small ADJ JJ Degree=Pos _ _ _ _ 3 population population NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 -7/ -7ith PUNCT HYPH _ _ _ _ SpaceAfter=No 7 GM GM PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 positively positively ADV RB _ _ _ _ _ 10 stained stain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 hemoglobin hemoglobin NOUN NN Number=Sing _ _ _ _ # sent_id = 8790 # text = (Hb) after a 7-day exposure to TPO. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 Hb Hb X LS _ _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 after after ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 day day NOUN NN Number=Sing _ _ _ _ 9 exposure exposure NOUN NN Number=Sing _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 TPO TPO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 8791 # text = More than 50% of TPO-treated UT-7/GMT cells positively stained for Hb. 1 More more ADJ JJR Degree=Cmp _ _ _ _ 2 than than ADP IN _ _ _ _ _ 3 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 % % SYM NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 TPO TPO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 13 GMT Gmt PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 positively positively ADV RB _ _ _ _ _ 16 stained stain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 Hb Hb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 8792 # text = Using UT-7/GMT cells, we examined how TPO promotes hemoglobinization. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 7/ 7ith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 5 GMT GMT PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 9 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 how how ADV WRB PronType=Int _ _ _ _ 11 TPO Tpo ADJ JJ Degree=Pos _ _ _ _ 12 promotes promote NOUN NNS Number=Plur _ _ _ _ 13 hemoglobinization hemoglobinization NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 8793 # text = TPO induced tyrosine phosphorylation of the TPO receptor but not the erythropoietin (EPO) receptor. 1 TPO TPo ADP IN _ _ _ _ _ 2 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 4 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 TPO TPO PROPN NNP Number=Sing _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 erythropoietin erythropoietin NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 EPO EPO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 8794 # text = There was no competition between TPO and EPO for binding to EPO receptor. 1 There there PRON EX _ _ _ _ _ 2 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 no no DET DT _ _ _ _ _ 4 competition competition NOUN NN Number=Sing _ _ _ _ 5 between between ADP IN _ _ _ _ _ 6 TPO Tpo PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 EPO Epo PROPN NNP Number=Sing _ _ _ _ 9 for for SCONJ IN _ _ _ _ _ 10 binding bind VERB VBG VerbForm=Ger _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 EPO EPO PROPN NNP Number=Sing _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 8795 # text = These findings suggest that TPO has a direct effect on hemoglobinization via a specific receptor on UT-7/GMT cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 TPO TPO PROPN NNP Number=Sing _ _ _ _ 6 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 direct direct ADJ JJ Degree=Pos _ _ _ _ 9 effect effect NOUN NN Number=Sing _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 hemoglobinization hemoglobinization NOUN NN Number=Sing _ _ _ _ 12 via via ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 specific specific ADJ JJ Degree=Pos _ _ _ _ 15 receptor receptor NOUN NN Number=Sing _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 UT UT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 21 GMT Gmt PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 8796 # text = Isoelectric focusing demonstrated that TPO induced fetal and adult 1 Isoelectric Isoelectric ADJ JJ Degree=Pos _ _ _ _ 2 focusing focusing NOUN NN Number=Sing _ _ _ _ 3 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 TPO TPO PROPN NNP Number=Sing _ _ _ _ 6 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 adult adult ADJ JJ Degree=Pos _ _ _ _ # sent_id = 8797 # text = Hb synthesis, whereas EPO induced embryonic, fetal, and adult 1 Hb Hb VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 synthesis synthesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 whereas whereas SCONJ IN _ _ _ _ _ 5 EPO EPO ADV RB _ _ _ _ _ 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 embryonic embryonic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 fetal fetal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 adult adult NOUN NN Number=Sing _ _ _ _ # sent_id = 8798 # text = Hb synthesis. 1 Hb Hb VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 synthesis synthesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 3 . . PUNCT . _ _ _ _ _ # sent_id = 8799 # text = Thus, our data suggest that TPO has a distinct action on erythropoiesis. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 data data NOUN NN Number=Sing _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 TPO TPO PROPN NNP Number=Sing _ _ _ _ 8 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 11 action action NOUN NN Number=Sing _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 erythropoiesis erythropoiesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8800 # text = Document 0030011566 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011566 0030011566 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8801 # text = Transcription factor binding sites downstream of the human immunodeficiency virus type 1 transcription start site are important for virus infectivity. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 binding bind VERB VBG VerbForm=Ger _ _ _ _ 4 sites site NOUN NNS Number=Plur _ _ _ _ 5 downstream downstream NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 10 virus virus NOUN NN Number=Sing _ _ _ _ 11 type type NOUN NN Number=Sing _ _ _ _ 12 1 1 NUM CD NumType=Card _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 start start NOUN NN Number=Sing _ _ _ _ 15 site site NOUN NN Number=Sing _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 important important ADJ JJ Degree=Pos _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 virus virus NOUN NN Number=Sing _ _ _ _ 20 infectivity infectivity NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8802 # text = When transcriptionally active, the human immunodeficiency virus (HIV) promoter contains a nucleosome-free region encompassing both the promoter/enhancer region and a large region (255 nucleotides [nt]) downstream of the transcription start site. 1 When when ADV WRB PronType=Int _ _ _ _ 2 transcriptionally transcriptionally ADV RB _ _ _ _ _ 3 active active ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 8 virus virus NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 nucleosome nucleosome ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 free free ADJ JJ Degree=Pos _ _ _ _ 18 region region NOUN NN Number=Sing _ _ _ _ 19 encompassing encompasse VERB VBG VerbForm=Ger _ _ _ _ 20 both both CCONJ CC _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 / / PUNCT , _ _ _ _ SpaceAfter=No 24 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 25 region region NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 large large ADJ JJ Degree=Pos _ _ _ _ 29 region region NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 255 255 NUM CD NumType=Card _ _ _ _ 32 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 33 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 nt not PART RB _ _ _ _ SpaceAfter=No 35 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 downstream downstream NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 transcription transcription NOUN NN Number=Sing _ _ _ _ 41 start start NOUN NN Number=Sing _ _ _ _ 42 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 8803 # text = We have previously identified new binding sites for transcription factors downstream of the transcription start site (nt 465 to 720): three AP-1 sites (I, II, and III), an AP3-like motif (AP3-L), a downstream binding factor (DBF) site, and juxtaposed Sp1 sites. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 new new ADJ JJ Degree=Pos _ _ _ _ 6 binding binding VERB VBG VerbForm=Ger _ _ _ _ 7 sites site NOUN NNS Number=Plur _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ _ 11 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 start start NOUN NN Number=Sing _ _ _ _ 16 site site NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 nt not PART RB _ _ _ _ _ 19 465 465 NUM CD NumType=Card _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 720 720 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 : : PUNCT : _ _ _ _ _ 24 three three NUM CD NumType=Card _ _ _ _ 25 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - SYM SYM _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 sites site NOUN NNS Number=Plur _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 II II PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 III iii NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 AP3 AP3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 like like ADJ JJ Degree=Pos _ _ _ _ 42 motif motif NOUN NN Number=Sing _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 46 - - PUNCT , _ _ _ _ SpaceAfter=No 47 L L PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 51 downstream downstream NOUN NN Number=Sing _ _ _ _ 52 binding binding VERB VBG VerbForm=Ger _ _ _ _ 53 factor factor NOUN NN Number=Sing _ _ _ _ 54 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 55 DBF DBF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 56 ) ) PUNCT -RRB- _ _ _ _ _ 57 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 , , PUNCT , _ _ _ _ _ 59 and and CCONJ CC _ _ _ _ _ 60 juxtaposed juxtapose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 61 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 62 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 63 . . PUNCT . _ _ _ _ _ # sent_id = 8804 # text = Here, we show that the DBF site is an interferon-responsive factor (IRF) binding site and that the AP3-L motif binds the T-cell-specific factor NF-AT. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 DBF DBF NOUN NN Number=Sing _ _ _ _ 8 site site NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 IRF IRF NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 site site NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 AP3 AP3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 L l ADJ JJ Degree=Pos _ _ _ _ 26 motif motif NOUN NN Number=Sing _ _ _ _ 27 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 specific specific ADJ JJ Degree=Pos _ _ _ _ 33 factor factor NOUN NN Number=Sing _ _ _ _ 34 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 AT at PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 8805 # text = Mutations that abolish the binding of each factor to its cognate site are introduced in an infectious HIV-1 molecular clone to study their effect on HIV-1 transcription and replication. 1 Mutations Mutation NOUN NNS Number=Plur _ _ _ _ 2 that that PRON WDT PronType=Rel _ _ _ _ 3 abolish abolish VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 binding binding NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 each each DET DT _ _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 11 cognate cognate ADJ JJ Degree=Pos _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 introduced introduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 infectious infectious ADJ JJ Degree=Pos _ _ _ _ 18 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 22 clone clone NOUN NN Number=Sing _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 study study VERB VB VerbForm=Inf _ _ _ _ 25 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 26 effect effect NOUN NN Number=Sing _ _ _ _ 27 on on ADP IN _ _ _ _ _ 28 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 8806 # text = Individual mutation of the DBF or AP3-L site as well as the double mutation AP-1(III)/AP3-L did not affect HIV-1 replication compared to that of the wild-type virus. 1 Individual individual ADJ JJ Degree=Pos _ _ _ _ 2 mutation mutation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 DBF DBF PROPN NNP Number=Sing _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 AP Ap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT : _ _ _ _ SpaceAfter=No 10 L l ADJ JJ Degree=Pos _ _ _ _ 11 site site NOUN NN Number=Sing _ _ _ _ 12 as as ADV RB _ _ _ _ _ 13 well well ADV RB Degree=Pos _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 double double ADJ JJ Degree=Pos _ _ _ _ 17 mutation mutation NOUN NN Number=Sing _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT : _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 III iii NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 / / PUNCT , _ _ _ _ SpaceAfter=No 25 AP3 AP3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 L l PROPN NNP Number=Sing _ _ _ _ 28 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 not not PART RB _ _ _ _ _ 30 affect affect VERB VB VerbForm=Inf _ _ _ _ 31 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 replication replication NOUN NN Number=Sing _ _ _ _ 35 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 type type NOUN NN Number=Sing _ _ _ _ 43 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 8807 # text = In contrast, proviruses carrying mutations in the Sp1 sites were totally defective in terms of replication. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 proviruses proviruse NOUN NNS Number=Plur _ _ _ _ 5 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 6 mutations mutation NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 10 sites site NOUN NNS Number=Plur _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 totally totally ADV RB _ _ _ _ _ 13 defective defective ADJ JJ Degree=Pos _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 terms term NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 8808 # text = Virus production occurred with slightly delayed kinetics for viruses containing combined mutations in the AP-1(III), AP3-L, and DBF sites and in the AP3-L and DBF-sites, whereas viruses mutated in the AP-1(I,II,III) and AP3-L sites and in the AP-1(I,II,III), AP3-L, and DBF sites exhibited a severely defective replicative phenotype. 1 Virus virus PROPN NNP Number=Sing _ _ _ _ 2 production production NOUN NN Number=Sing _ _ _ _ 3 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 slightly slightly ADV RB _ _ _ _ _ 6 delayed delayed ADJ JJ Degree=Pos _ _ _ _ 7 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 viruses viruse NOUN NNS Number=Plur _ _ _ _ 10 containing contain VERB VBG VerbForm=Ger _ _ _ _ 11 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 mutations mutation NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 III iii NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 AP Ap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 L l PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 DBF DBF PROPN NNP Number=Sing _ _ _ _ 29 sites site NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 L l PROPN NNP Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 DBF Dbf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 whereas whereas SCONJ IN _ _ _ _ _ 43 viruses viruse NOUN NNS Number=Plur _ _ _ _ 44 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 51 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ SpaceAfter=No 53 II II PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 , , PUNCT , _ _ _ _ SpaceAfter=No 55 III III PROPN NNP Number=Sing _ _ _ SpaceAfter=No 56 ) ) PUNCT -RRB- _ _ _ _ _ 57 and and CCONJ CC _ _ _ _ _ 58 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 60 - - PUNCT , _ _ _ _ SpaceAfter=No 61 L l ADJ JJ Degree=Pos _ _ _ _ 62 sites site NOUN NNS Number=Plur _ _ _ _ 63 and and CCONJ CC _ _ _ _ _ 64 in in ADP IN _ _ _ _ _ 65 the the DET DT Definite=Def|PronType=Art _ _ _ _ 66 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 67 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 68 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 69 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 70 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 71 , , PUNCT , _ _ _ _ SpaceAfter=No 72 II ii PROPN NNP Number=Sing _ _ _ SpaceAfter=No 73 , , PUNCT , _ _ _ _ SpaceAfter=No 74 III iii PROPN NNP Number=Sing _ _ _ SpaceAfter=No 75 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 76 , , PUNCT , _ _ _ _ _ 77 AP Ap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 78 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 79 - - PUNCT , _ _ _ _ SpaceAfter=No 80 L l PROPN NNP Number=Sing _ _ _ SpaceAfter=No 81 , , PUNCT , _ _ _ _ _ 82 and and CCONJ CC _ _ _ _ _ 83 DBF DBF PROPN NNP Number=Sing _ _ _ _ 84 sites site NOUN NNS Number=Plur _ _ _ _ 85 exhibited exhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 86 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 87 severely severely ADV RB _ _ _ _ _ 88 defective defective ADJ JJ Degree=Pos _ _ _ _ 89 replicative replicative ADJ JJ Degree=Pos _ _ _ _ 90 phenotype phenotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 91 . . PUNCT . _ _ _ _ _ # sent_id = 8809 # text = No RNA-packaging defect could be measured for any of the mutant viruses as determined by quantification of their HIV genomic RNA. 1 No no DET DT _ _ _ _ _ 2 RNA RNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 packaging packaging NOUN NN Number=Sing _ _ _ _ 5 defect defect NOUN NN Number=Sing _ _ _ _ 6 could could AUX MD VerbForm=Fin _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 measured measure VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 any any DET DT _ _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 14 viruses virus NOUN NNS Number=Plur _ _ _ _ 15 as as SCONJ IN _ _ _ _ _ 16 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 quantification quantification NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 HIV Hiv NOUN NN Number=Sing _ _ _ _ 22 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 23 RNA RNa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 8810 # text = Measurement of the transcriptional activity of the HIV-1 promoter after transient transfection of the HIV-1 provirus DNA or of long terminal repeat-luciferase constructs showed a positive correlation between the transcriptional and the replication defects for most mutants. 1 Measurement Measurement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 after after ADP IN _ _ _ _ _ 13 transient transient ADJ JJ Degree=Pos _ _ _ _ 14 transfection transfection NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 provirus provirus NOUN NN Number=Sing _ _ _ _ 21 DNA dna NOUN NN Number=Sing _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 long long ADJ JJ Degree=Pos _ _ _ _ 25 terminal terminal NOUN NN Number=Sing _ _ _ _ 26 repeat repeat NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 29 constructs construct NOUN NNS Number=Plur _ _ _ _ 30 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 positive positive ADJ JJ Degree=Pos _ _ _ _ 33 correlation correlation NOUN NN Number=Sing _ _ _ _ 34 between between ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 replication replication NOUN NN Number=Sing _ _ _ _ 40 defects defects NOUN NNS Number=Plur _ _ _ _ 41 for for ADP IN _ _ _ _ _ 42 most most ADJ JJS Degree=Sup _ _ _ _ 43 mutants mutant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8811 # text = Document 0030011567 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011567 0030011567 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8812 # text = High-level replication of human immunodeficiency virus in thymocytes requires NF-kappaB activation through interaction with thymic epithelial cells. 1 High high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 level level NOUN NN Number=Sing _ _ _ _ 4 replication replication NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 8 virus virus NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 11 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 through through ADP IN _ _ _ _ _ 17 interaction interaction NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 thymic thymic ADJ JJ Degree=Pos _ _ _ _ 20 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8813 # text = We have previously demonstrated that interaction of infected thymocytes with autologous thymic epithelial cells (TEC) is a prerequisite for a high level of human immunodeficiency virus type 1 (HIV-1) replication in thymocytes (M.Rothe, L.Chene, M.Nugeyre, F.Barre-Sinoussi, and N.Israel, J.Virol.72:5852-5861, 1998). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 interaction interaction NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 infected infect ADJ JJ Degree=Pos _ _ _ _ 9 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 autologous autologous ADJ JJ Degree=Pos _ _ _ _ 12 thymic thymic ADJ JJ Degree=Pos _ _ _ _ 13 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 TEC TEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 prerequisite prerequisite NOUN NN Number=Sing _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 high high ADJ JJ Degree=Pos _ _ _ _ 24 level level NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 28 virus virus NOUN NN Number=Sing _ _ _ _ 29 type type NOUN NN Number=Sing _ _ _ _ 30 1 1 NUM CD NumType=Card _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 replication replication NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 M.Rothe M.Rothan NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 L.Chene L.Chene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 M.Nugeyre M.Nugeyre PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 F.Barre F.Barre PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 Sinoussi Sinoussi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 N.Israel N.Israel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 J.Virol J.Virol PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 .72:5852- .72:5852- SYM SYM _ _ _ _ SpaceAfter=No 55 5861 5861 NUM CD NumType=Card _ _ _ SpaceAfter=No 56 , , PUNCT , _ _ _ _ _ 57 1998 1998 NUM CD NumType=Card _ _ _ SpaceAfter=No 58 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 8814 # text = We report here that this activation of HIV replication takes place at the transcriptional level through activation of the Rel/NF-kappaB transcription factors. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 HIV Hiv PROPN NNP Number=Sing _ _ _ _ 9 replication replication NOUN NN Number=Sing _ _ _ _ 10 takes take VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 place place NOUN NN Number=Sing _ _ _ _ 12 at at ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 15 level level NOUN NN Number=Sing _ _ _ _ 16 through through ADP IN _ _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 8815 # text = We first demonstrate that an HIV-1 provirus (SF-2 strain) very effectively replicates in thymocytes cocultured with TEC whereas this provirus, with kappaB sites deleted, fails to replicate. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 first first ADV RB _ _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 provirus provirus NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 SF SF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 strain strain NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 very very ADV RB _ _ _ _ _ 17 effectively effectively ADV RB _ _ _ _ _ 18 replicates replicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 21 cocultured coculture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 TEC TEC PROPN NNP Number=Sing _ _ _ _ 24 whereas whereas SCONJ IN _ _ _ _ _ 25 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 26 provirus provirus NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 30 sites site NOUN NNS Number=Plur _ _ _ _ 31 deleted delete VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 fails fail NOUN NNS Number=Plur _ _ _ _ 34 to to PART TO _ _ _ _ _ 35 replicate replicate VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 8816 # text = We provide evidence that several NF-kappaB complexes are constitutively found in the nuclei of thymocytes either freshly isolated from the thymus or maintained in coculture with autologous or heterologous TEC. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 evidence evidence NOUN NN Number=Sing _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 several several ADJ JJ Degree=Pos _ _ _ _ 6 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappab NOUN NN Number=Sing _ _ _ _ 9 complexes complex NOUN NNS Number=Plur _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 constitutively constitutively ADV RB _ _ _ _ _ 12 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 18 either either CCONJ CC _ _ _ _ _ 19 freshly freshly ADV RB _ _ _ _ _ 20 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 thymus thymus NOUN NN Number=Sing _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 maintained maintain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 coculture coculture NOUN NN Number=Sing _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 autologous autologous ADJ JJ Degree=Pos _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 32 TEC TEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 8817 # text = The prevalent complex is the heterodimer p50-p65. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 prevalent prevalent ADJ JJ Degree=Pos _ _ _ _ 3 complex complex NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 7 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT : _ _ _ _ SpaceAfter=No 9 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 8818 # text = NF-kappaB activity is tightly correlated with the transcriptional activity of a long terminal repeat (LTR) of HIV-1 transfected in thymocytes. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 activity activity NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 tightly tightly ADV RB _ _ _ _ _ 7 correlated correlate ADJ JJ Degree=Pos _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 long long ADJ JJ Degree=Pos _ _ _ _ 15 terminal terminal NOUN NN Number=Sing _ _ _ _ 16 repeat repeat NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 8819 # text = The cotransfection of this LTR with a mutated IkappaBalpha molecule formally demonstrates that LTR transactivation is regulated by members of the Rel/NF-kappaB family in thymocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cotransfection cotransfection NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 LTR Ltr NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 10 molecule molecule NOUN NN Number=Sing _ _ _ _ 11 formally formally ADV RB _ _ _ _ _ 12 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 14 LTR Ltr ADJ JJ Degree=Pos _ _ _ _ 15 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 members member NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 Rel/ Rel/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 26 family family NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 8820 # text = We also showed that tumor necrosis factor (TNF) and to a lesser extent interleukin-1 (IL-1), secreted within the coculture, induce NF-kappaB activity and a correlative LTR transactivation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 tumor tumor NOUN NN Number=Sing _ _ _ _ 6 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 lesser lesser ADJ JJR Degree=Cmp _ _ _ _ 15 extent extent NOUN NN Number=Sing _ _ _ _ 16 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 secreted secrete VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 within within ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 coculture coculture NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 induce induce NOUN NN Number=Sing _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 34 activity activity NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 correlative correlative ADJ JJ Degree=Pos _ _ _ _ 38 LTR Ltr NOUN NN Number=Sing _ _ _ _ 39 transactivation transactivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 8821 # text = However IL-7, a crucial factor for thymopoiesis that is secreted mainly by TEC, is a necessary cofactor for NF-kappaB activation elicited by TNF or IL-1. 1 However however ADV RB _ _ _ _ _ 2 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 thymopoiesis thymopoiesis PRON DT Number=Sing|PronType=Dem _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 secreted secret VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 mainly mainly ADV RB _ _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 TEC TEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 21 cofactor cofactor NOUN NN Number=Sing _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 elicited elicit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 TNF TNF PROPN NNP Number=Sing _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 8822 # text = Together, these data indicate that NF-kappaB activation, required for a high level of HIV replication in thymocytes, is regulated in a specific manner in the thymic microenvironment which provides the necessary cytokines: TNF, IL-1, and IL-7. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 data data NOUN NN Number=Sing _ _ _ _ 5 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 high high ADJ JJ Degree=Pos _ _ _ _ 16 level level NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 HIV HIV PROPN NNP Number=Sing _ _ _ _ 19 replication replication NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 specific specific ADJ JJ Degree=Pos _ _ _ _ 28 manner manner NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 thymic thymic ADJ JJ Degree=Pos _ _ _ _ 32 microenvironment microenvironment NOUN NN Number=Sing _ _ _ _ 33 which which PRON WDT PronType=Rel _ _ _ _ 34 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 37 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 : : PUNCT : _ _ _ _ _ 39 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 IL il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8823 # text = Document 0030011571 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011571 0030011571 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8824 # text = Cell activation and apoptosis by bacterial lipoproteins through toll-like receptor-2. 1 Cell cell NOUN NN Number=Sing _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 7 lipoproteins lipoprotein NOUN NNS Number=Plur _ _ _ _ 8 through through ADP IN _ _ _ _ _ 9 toll toll NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 like like ADJ JJ Degree=Pos _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8825 # text = Apoptosis is implicated in the generation and resolution of inflammation in response to bacterial pathogens. 1 Apoptosis Apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 generation generation NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 resolution resolution NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 response response NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 15 pathogens pathogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 8826 # text = All bacterial pathogens produce lipoproteins (BLPs), which trigger the innate immune response. 1 All all DET DT _ _ _ _ _ 2 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 3 pathogens pathogen NOUN NNS Number=Plur _ _ _ _ 4 produce produce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 lipoproteins lipoprotein NOUN NNS Number=Plur _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 BLPs BLPs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 which which PRON WDT PronType=Rel _ _ _ _ 11 trigger trigger VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 innate innate ADJ JJ Degree=Pos _ _ _ _ 14 immune immune ADJ JJ Degree=Pos _ _ _ _ 15 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 8827 # text = BLPs were found to induce apoptosis in THP-1 monocytic cells through human Toll-like receptor-2 (hTLR2). 1 BLPs BLP NOUN NNS Number=Plur _ _ _ _ 2 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 induce induce VERB VB VerbForm=Inf _ _ _ _ 6 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 THP THP NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 through through ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 Toll toll PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 like like ADJ JJ Degree=Pos _ _ _ _ 18 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 hTLR2 hTLR2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 8828 # text = BLPs also initiated apoptosis in an epithelial cell line transfected with hTLR2. 1 BLPs BLP PROPN NNP Number=Sing _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 initiated initiate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 apoptosis apoptosis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 line line NOUN NN Number=Sing _ _ _ _ 10 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 hTLR2 htlr2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 8829 # text = In addition, BLPs stimulated nuclear factor-kappaB, a transcriptional activator of multiple host defense genes, and activated the respiratory burst through hTLR2. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 BLPs BLPs PROPN NNP Number=Sing _ _ _ _ 5 stimulated stimulate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 13 activator activator NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 16 host host NOUN NN Number=Sing _ _ _ _ 17 defense defense NOUN NN Number=Sing _ _ _ _ 18 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 respiratory respiratory ADJ JJ Degree=Pos _ _ _ _ 24 burst burst NOUN NN Number=Sing _ _ _ _ 25 through through ADP IN _ _ _ _ _ 26 hTLR2 hTLR2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 8830 # text = Thus, hTLR2 is a molecular link between microbial products, apoptosis, and host defense mechanisms. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 hTLR2 htlr2 NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 7 link link NOUN NN Number=Sing _ _ _ _ 8 between between ADP IN _ _ _ _ _ 9 microbial microbial ADJ JJ Degree=Pos _ _ _ _ 10 products product NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 host host VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 defense defense NOUN NN Number=Sing _ _ _ _ 17 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8831 # text = Document 0030011579 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011579 0030011579 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8832 # text = A lymphoid cell-specific nuclear factor containing c-Rel-like proteins preferentially interacts with interleukin-6 kappa B-related motifs whose activities are repressed in lymphoid cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 containing contain VERB VBG VerbForm=Ger _ _ _ _ 9 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 -like -like ADP IN _ _ _ _ _ 13 proteins protein NOUN NNS Number=Plur _ _ _ _ 14 preferentially preferentially ADV RB _ _ _ _ _ 15 interacts interact NOUN NNS Number=Plur _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 6 6 NUM CD NumType=Card _ _ _ _ 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B- B- SYM SYM _ _ _ _ SpaceAfter=No 22 related relate ADJ JJ Degree=Pos _ _ _ _ 23 motifs motif NOUN NNS Number=Plur _ _ _ _ 24 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 25 activities activity NOUN NNS Number=Plur _ _ _ _ 26 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 repressed repress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8833 # text = The proto-oncoprotein c-Rel is a member of the nuclear factor kappa B transcription factor family, which includes the p50 and p65 subunits of nuclear factor kappa B. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 proto-oncoprotein proto-oncoprotein NOUN NN Number=Sing _ _ _ _ 3 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 Rel Rel NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 member member NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 includes include VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 p50 p50 NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 p65 p65 NUM CD NumType=Card _ _ _ _ 25 subunits subunit NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 28 factor factor NOUN NN Number=Sing _ _ _ _ 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 8834 # text = We show here that c-Rel binds to kappa B sites as homodimers as well as heterodimers with p50. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 Rel Rel NOUN NN Number=Sing _ _ _ _ 8 binds bind NOUN NNS Number=Plur _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 sites site NOUN NNS Number=Plur _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 homodimers homodimer NOUN NNS Number=Plur _ _ _ _ 15 as as ADV RB _ _ _ _ _ 16 well well ADV RB Degree=Pos _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 8835 # text = These homodimers and heterodimers show distinct DNA-binding specificities and affinities for various kappa B motifs. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 homodimers homodimer NOUN NNS Number=Plur _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 5 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 7 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 specificities specificity NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 affinities affinity NOUN NNS Number=Plur _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 various various ADJ JJ Degree=Pos _ _ _ _ 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 8836 # text = In particular, the c-Rel homodimer has a high affinity for interleukin-6 (IL-6) and beta interferon kappa B sites. 1 In in ADP IN _ _ _ _ _ 2 particular particular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 Rel Rel NOUN NN Number=Sing _ _ _ _ 8 homodimer homodimer NOUN NN Number=Sing _ _ _ _ 9 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 high high ADJ JJ Degree=Pos _ _ _ _ 12 affinity affinity NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 6 6 NUM CD NumType=Card _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 beta beta NOUN NN Number=Sing _ _ _ _ 24 interferon interferon NOUN NN Number=Sing _ _ _ _ 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 8837 # text = In spite of its association with p50 in vitro, however, we found a lymphoid cell-specific nuclear factor in vivo that contains c-Rel but not p50 epitopes; this factor, termed IL-6 kappa B binding factor 1 In in ADP IN _ _ _ _ _ 2 spite spite NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 5 association association NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 p50 p50 NUM CD NumType=Card _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 however however ADV RB _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 vivo vivo NOUN NN Number=Sing _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 Rel Rel NOUN NN Number=Sing _ _ _ _ 29 but but CCONJ CC _ _ _ _ _ 30 not not PART RB _ _ _ _ _ 31 p50 p50 NUM CD NumType=Card _ _ _ _ 32 epitopes epitope NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 ; ; PUNCT , _ _ _ _ _ 34 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 6 6 NUM CD NumType=Card _ _ _ _ 41 kappa kappa NOUN NN Number=Sing _ _ _ _ 42 B b NOUN NN Number=Sing _ _ _ _ 43 binding bind VERB VBG VerbForm=Ger _ _ _ _ 44 factor factor NOUN NN Number=Sing _ _ _ _ # sent_id = 8838 # text = II, appears to contain the c-Rel homodimer and preferentially recognizes several IL-6 kappa B-related kappa B motifs. 1 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 contain contain VERB VB VerbForm=Inf _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Rel Rel NOUN NN Number=Sing _ _ _ _ 10 homodimer homodimer NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 preferentially preferentially ADV RB _ _ _ _ _ 13 recognizes recognize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 several several ADJ JJ Degree=Pos _ _ _ _ 15 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 6 6 NUM CD NumType=Card _ _ _ _ 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 related related ADJ JJ Degree=Pos _ _ _ _ 22 kappa kappa NOUN NN Number=Sing _ _ _ _ 23 B b NOUN NN Number=Sing _ _ _ _ 24 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 8839 # text = Although it has been previously shown that the IL-6 kappa B motif functions as a potent IL-1/tumor necrosis factor-responsive element in nonlymphoid cells, its activity was found to be repressed in lymphoid cells such as a Jurkat T-cell line. 1 Although although SCONJ IN _ _ _ _ _ 2 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 3 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 previously previously ADV RB _ _ _ _ _ 6 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 6 6 NUM CD NumType=Card _ _ _ _ 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 motif motif NOUN NN Number=Sing _ _ _ _ 15 functions function NOUN NNS Number=Plur _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 potent potent NOUN NN Number=Sing _ _ _ _ 19 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 23 tumor tumor NOUN NN Number=Sing _ _ _ _ 24 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 -responsive -responsive ADJ JJ Degree=Pos _ _ _ _ 27 element element NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 nonlymphoid nonlymphoid ADJ JJ Degree=Pos _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 33 activity activity NOUN NN Number=Sing _ _ _ _ 34 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 35 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 to to PART TO _ _ _ _ _ 37 be be AUX VB VerbForm=Inf _ _ _ _ 38 repressed repress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 lymphoid lymphoid VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ _ 42 such such ADJ JJ Degree=Pos _ _ _ _ 43 as as ADP IN _ _ _ _ _ 44 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 45 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 46 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 cell cell NOUN NN Number=Sing _ _ _ _ 48 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 8840 # text = We also present evidence that IL-6 kappa B binding factor II functions as a repressor specific for IL-6 kappa B-related kappa B motifs in lymphoid cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 present present VERB VB VerbForm=Inf _ _ _ _ 4 evidence evidence NOUN NN Number=Sing _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 6 6 NUM CD NumType=Card _ _ _ _ 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 II ii NUM CD NumType=Card _ _ _ _ 14 functions function NOUN NNS Number=Plur _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 repressor repressor NOUN NN Number=Sing _ _ _ _ 18 specific specific ADJ JJ Degree=Pos _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 6 6 NUM CD NumType=Card _ _ _ _ 23 kappa kappa NOUN NN Number=Sing _ _ _ _ 24 B- B- SYM SYM _ _ _ _ SpaceAfter=No 25 related related ADJ JJ Degree=Pos _ _ _ _ 26 kappa kappa NOUN NN Number=Sing _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ _ 28 motifs motif NOUN NNS Number=Plur _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8841 # text = Document 0030011583 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011583 0030011583 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8842 # text = Monocyte arrest and transmigration on inflamed endothelium in shear flow is inhibited by adenovirus-mediated gene transfer of IkappaB-alpha. 1 Monocyte Monocyte NOUN NN Number=Sing _ _ _ _ 2 arrest arrest NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 transmigration transmigration NOUN NN Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 inflamed inflam VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 endothelium endothelium NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 shear shear NOUN NN Number=Sing _ _ _ _ 10 flow flow NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 adenovirus adenovirus NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 transfer transfer NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8843 # text = Mobilization of nuclear factor-kappaB (NF-kappaB) activates transcription of genes encoding endothelial adhesion molecules and chemokines that contribute to monocyte infiltration critical in atherogenesis. 1 Mobilization Mobilization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 -kappaB -kappaB PROPN NNP Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 genes gene NOUN NNS Number=Plur _ _ _ _ 15 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 16 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 17 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 18 molecules molecule NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 chemokines chemokine NOUN NNS Number=Plur _ _ _ _ 21 that that PRON WDT PronType=Rel _ _ _ _ 22 contribute contribute VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 monocyte monocyte VERB VB VerbForm=Inf _ _ _ _ 25 infiltration infiltration NOUN NN Number=Sing _ _ _ _ 26 critical critical ADJ JJ Degree=Pos _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 atherogenesis atherogenesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 8844 # text = Inhibition of NF-kappaB has been achieved by pharmacological and genetic approaches; however, monocyte interactions with activated endothelium in shear flow following gene transfer of the NF-kappaB inhibitor IkappaB-alpha have not been studied. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 6 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 achieved achieve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 pharmacological pharmacological ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 13 approaches approache NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 ; ; PUNCT , _ _ _ _ _ 15 however however ADV RB _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 monocyte monocyte ADJ JJ Degree=Pos _ _ _ _ 18 interactions interaction NOUN NNS Number=Plur _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 endothelium endothelium NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 shear shear NOUN NN Number=Sing _ _ _ _ 24 flow flow NOUN NN Number=Sing _ _ _ _ 25 following follow VERB VBG VerbForm=Ger _ _ _ _ 26 gene gene ADJ JJ Degree=Pos _ _ _ _ 27 transfer transfer NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 33 inhibitor inhibitor ADP IN _ _ _ _ _ 34 IkappaB Ikappab PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 alpha alpha NOUN NN Number=Sing _ _ _ _ 37 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 38 not not PART RB _ _ _ _ _ 39 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 40 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 8845 # text = We found that overexpression of IkappaB-alpha in endothelial cells using a recombinant adenovirus prevented tumor necrosis factor-alpha (TNF-alpha)-induced degradation of IkappaB-alpha and suppressed the upregulation of vascular cell adhesion molecule-1 (VCAM-1), intercellular adhesion molecule-1 (ICAM-1), and E-selectin mRNA and surface protein expression and the upregulation of transcripts for the chemokines monocyte chemoattractant protein 1 (MCP-1) and growth-related activity-alpha (GRO-alpha) by TNF-alpha. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 alpha alpha NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 using use VERB VBG VerbForm=Ger _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 recombinant recombinant NOUN NN Number=Sing _ _ _ _ 15 adenovirus adenovirus ADP IN _ _ _ _ _ 16 prevented prevent VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 tumor tumor NOUN NN Number=Sing _ _ _ _ 18 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 -alpha -alpha NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 degradation degradation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 alpha alpha NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 suppressed suppress VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 41 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 1 1 NUM CD NumType=Card _ _ _ _ 44 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 45 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 intercellular intercellular ADJ JJ Degree=Pos _ _ _ _ 51 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 52 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 54 1 1 NUM CD NumType=Card _ _ _ _ 55 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 56 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 59 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 60 , , PUNCT , _ _ _ _ _ 61 and and CCONJ CC _ _ _ _ _ 62 E- E- NOUN NN Number=Sing _ _ _ SpaceAfter=No 63 selectin selectin NOUN NN Number=Sing _ _ _ _ 64 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 65 and and CCONJ CC _ _ _ _ _ 66 surface surface NOUN NN Number=Sing _ _ _ _ 67 protein protein NOUN NN Number=Sing _ _ _ _ 68 expression expression NOUN NN Number=Sing _ _ _ _ 69 and and CCONJ CC _ _ _ _ _ 70 the the DET DT Definite=Def|PronType=Art _ _ _ _ 71 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 72 of of ADP IN _ _ _ _ _ 73 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 74 for for ADP IN _ _ _ _ _ 75 the the DET DT Definite=Def|PronType=Art _ _ _ _ 76 chemokines chemokine NOUN NNS Number=Plur _ _ _ _ 77 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 78 chemoattractant chemoattractant NOUN NN Number=Sing _ _ _ _ 79 protein protein NOUN NN Number=Sing _ _ _ _ 80 1 1 NUM CD NumType=Card _ _ _ _ 81 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 82 MCP Mcp NOUN NN Number=Sing _ _ _ SpaceAfter=No 83 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 84 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 85 ) ) PUNCT -RRB- _ _ _ _ _ 86 and and CCONJ CC _ _ _ _ _ 87 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 88 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 89 related related ADJ JJ Degree=Pos _ _ _ _ 90 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 91 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 92 alpha alpha NOUN NN Number=Sing _ _ _ _ 93 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 94 GRO- Gro- NOUN NN Number=Sing _ _ _ SpaceAfter=No 95 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 96 ) ) PUNCT -RRB- _ _ _ _ _ 97 by by ADP IN _ _ _ _ _ 98 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 99 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 100 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 101 . . PUNCT . _ _ _ _ _ # sent_id = 8846 # text = This was associated with a reduction in endothelial MCP-1 secretion and GRO-alpha immobilization. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 reduction reduction NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 9 MCP Mcp NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 secretion secretion NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 GRO gro NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 immobilization immobilization NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 8847 # text = Adhesion assays under physiological shear flow conditions showed that firm arrest, spreading, and transmigration of monocytes on TNF-alpha-activated endothelium was markedly inhibited by IkappaB-alpha overexpression. 1 Adhesion Adhesion NOUN NN Number=Sing _ _ _ _ 2 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 under under ADP IN _ _ _ _ _ 4 physiological physiological ADJ JJ Degree=Pos _ _ _ _ 5 shear shear NOUN NN Number=Sing _ _ _ _ 6 flow flow NOUN NN Number=Sing _ _ _ _ 7 conditions condition NOUN NNS Number=Plur _ _ _ _ 8 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 firm firm ADJ JJ Degree=Pos _ _ _ _ 11 arrest arrest NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 spreading spreading NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 transmigration transmigration NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 endothelium endothelium NOUN NN Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 markedly markedly ADV RB _ _ _ _ _ 28 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 alpha alpha ADP IN _ _ _ _ _ 33 overexpression overexpression NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 8848 # text = Inhibition with monoclonal antibodies and peptide antagonists inferred that this was due to reduced expression of Ig integrin ligand as well as of chemokines specifically involved in these events. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 4 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 peptide peptide NOUN NN Number=Sing _ _ _ _ 7 antagonists antagonist NOUN NNS Number=Plur _ _ _ _ 8 inferred infer VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 due due ADP IN _ _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 Ig ig PROPN NNP Number=Sing _ _ _ _ 18 integrin integrin NOUN NN Number=Sing _ _ _ _ 19 ligand ligand NOUN NN Number=Sing _ _ _ _ 20 as as ADV RB _ _ _ _ _ 21 well well ADV RB Degree=Pos _ _ _ _ 22 as as ADP IN _ _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 chemokines chemokine NOUN NNS Number=Plur _ _ _ _ 25 specifically specifically ADV RB _ _ _ _ _ 26 involved involved ADJ JJ Degree=Pos _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 29 events event NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 8849 # text = In contrast, rolling of monocytes was increased by IkappaB-alpha transfer and was partly mediated by P-selectin; however, it appeared to be unaffected by the inhibition of E-selectin induction. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 rolling rolling NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 alpha alpha ADP IN _ _ _ _ _ 13 transfer transfer NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 partly partly ADV RB _ _ _ _ _ 17 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 P- P- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 selectin selectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ; ; PUNCT , _ _ _ _ _ 22 however however ADV RB _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 25 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 be be AUX VB VerbForm=Inf _ _ _ _ 28 unaffected unaffect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 E- E- NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 selectin selectin NOUN NN Number=Sing _ _ _ _ 35 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 8850 # text = Thus, our data provide novel evidence that selective modulation of NF-kappaB by adenoviral transfer of IkappaB-alpha impairs the expression of multiple endothelial gene products required for subsequent monocyte arrest and emigration in shear flow and thus for monocyte infiltration in atherosclerotic plaques. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 data data NOUN NN Number=Sing _ _ _ _ 5 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 novel novel ADJ JJ Degree=Pos _ _ _ _ 7 evidence evidence NOUN NN Number=Sing _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 selective selective ADJ JJ Degree=Pos _ _ _ _ 10 modulation modulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 adenoviral adenoviral ADJ JJ Degree=Pos _ _ _ _ 17 transfer transfer NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 alpha alpha NOUN NN Number=Sing _ _ _ _ 22 impairs impair NOUN NNS Number=Plur _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 27 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 products product NOUN NNS Number=Plur _ _ _ _ 30 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 33 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 34 arrest arrest NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 emigration emigration NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 shear shear ADJ JJ Degree=Pos _ _ _ _ 39 flow flow NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 thus thus ADV RB _ _ _ _ _ 42 for for ADP IN _ _ _ _ _ 43 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 44 infiltration infiltration NOUN NN Number=Sing _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 atherosclerotic atherosclerotic ADJ JJ Degree=Pos _ _ _ _ 47 plaques plaque NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8851 # text = Document 0030011588 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011588 0030011588 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8852 # text = The hematopoietic transcription factor PU.1 is downregulated in human multiple myeloma cell lines. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 downregulated downregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 11 myeloma myeloma NOUN NN Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8853 # text = PU.1 is a hematopoietic transcription factor belonging to the Ets-family. 1 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 belonging belong VERB VBG VerbForm=Ger _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 Ets- ets- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 8854 # text = It is identical to the Spi-1 oncogene, which is implicated in spleen focus-forming virus-induced murine erythroleukemias. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 identical identical ADJ JJ Degree=Pos _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 oncogene oncogene NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 spleen spleen VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 focus focus NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 forming forming VERB VBG VerbForm=Ger _ _ _ _ 19 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 -induced -induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 murine murine NOUN NN Number=Sing _ _ _ _ 22 erythroleukemias erythroleukemia NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 8855 # text = PU.1 seems to be required for early development of multiple hematopoietic lineages, but its expression in mature cells is preferentially observed in cells of the B-cell-and monocyte/macrophage-differentiation lineage. 1 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 2 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 be be AUX VB VerbForm=Inf _ _ _ _ 5 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 early early ADJ JJ Degree=Pos _ _ _ _ 8 development development NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 11 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 12 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 mature mature ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 preferentially preferentially ADV RB _ _ _ _ _ 22 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 and and CCONJ CC _ _ _ _ _ 31 monocyte/ monocyte/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 32 macrophage-differentiation macrophage-differentiation NOUN NN Number=Sing _ _ _ _ 33 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 8856 # text = It binds the so-called Pu box, an important tissue-specific regulatory DNA element present in a number of genes expressed in these cell lineages. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 so so ADV RB _ _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 Pu Pu NOUN NN Number=Sing _ _ _ _ 8 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 important important ADJ JJ Degree=Pos _ _ _ _ 12 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 specific specific ADJ JJ Degree=Pos _ _ _ _ 15 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ _ 17 element element NOUN NN Number=Sing _ _ _ _ 18 present present ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 number number NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 genes gene NOUN NNS Number=Plur _ _ _ _ 24 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 8857 # text = We have analyzed the expression and activity of PU.1 during human B-cell development using a panel of B-cell lines representing different stages of maturation, from early precursors to differentiated plasma cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 PU.1 Pu.1 PROPN NNP Number=Sing _ _ _ _ 10 during during ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 development development NOUN NN Number=Sing _ _ _ _ 16 using use VERB VBG VerbForm=Ger _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 panel panel NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 lines line NOUN NNS Number=Plur _ _ _ _ 24 representing represent VERB VBG VerbForm=Ger _ _ _ _ 25 different different ADJ JJ Degree=Pos _ _ _ _ 26 stages stage NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 maturation maturation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 from from ADP IN _ _ _ _ _ 31 early early ADJ JJ Degree=Pos _ _ _ _ 32 precursors precursor NOUN NNS Number=Plur _ _ _ _ 33 to to PART TO _ _ _ _ _ 34 differentiated differentiate VERB VB VerbForm=Inf _ _ _ _ 35 plasma plasma NOUN NN Number=Sing _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 8858 # text = PU.1 mRNA expression and PU.1 DNA binding activity, as measured by Northern blot analysis and electrophoretic mobility shift assay, respectively, were evident in cell lines representing pro-B, pre-B, and mature B cells. 1 PU.1 PU.1 NUM CD NumType=Card _ _ _ _ 2 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 PU.1 PU.1 NOUN NN Number=Sing _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ _ 7 binding binding VERB VBG VerbForm=Ger _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 as as SCONJ IN _ _ _ _ _ 11 measured measure VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 14 blot blot NOUN NN Number=Sing _ _ _ _ 15 analysis analysis NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 18 mobility mobility NOUN NN Number=Sing _ _ _ _ 19 shift shift NOUN NN Number=Sing _ _ _ _ 20 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 evident evident ADJ JJ Degree=Pos _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 lines line NOUN NNS Number=Plur _ _ _ _ 29 representing represent VERB VBG VerbForm=Ger _ _ _ _ 30 pro pro ADP IN Typo=Yes _ _ _ SpaceAfter=No 31 -B -b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 pre pre X AFX _ _ _ _ SpaceAfter=No 34 -B -b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 mature mature ADJ JJ Degree=Pos _ _ _ _ 38 B b ADJ JJ Degree=Pos _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 8859 # text = We could also show Pu box-dependent transactivation of a reporter gene in transient transfections in these cell lines. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 could could AUX MD VerbForm=Fin _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 show show VERB VB VerbForm=Inf _ _ _ _ 5 Pu Pu PROPN NNP Number=Sing _ _ _ _ 6 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 9 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 reporter reporter NOUN NN Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 transient transient ADJ JJ Degree=Pos _ _ _ _ 16 transfections transfection NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 8860 # text = In contrast, in a number of multiple myeloma cell lines, representing differentiated, plasma cell-like B cells, PU.1 DNA binding activity, mRNA expression, and Pu box-dependent transactivation were absent or detectable at a very low level. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 number number NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 9 myeloma myeloma NOUN NN Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 representing represent VERB VBG VerbForm=Ger _ _ _ _ 14 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 plasma plasma NOUN NN Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 like like ADJ JJ Degree=Pos _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 PU.1 PU.1 NUM CD NumType=Card _ _ _ _ 24 DNA dna NOUN NN Number=Sing _ _ _ _ 25 binding binding VERB VBG VerbForm=Ger _ _ _ _ 26 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 Pu Pu PROPN NNP Number=Sing _ _ _ _ 33 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 36 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 37 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 38 absent absend VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 or or CCONJ CC _ _ _ _ _ 40 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 41 at at ADP IN _ _ _ _ _ 42 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 very very ADV RB _ _ _ _ _ 44 low low ADJ JJ Degree=Pos _ _ _ _ 45 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 8861 # text = In lymphoblastoid cell lines, which exemplify an intermediate stage of B-cell differentiation, a reduced expression and activity were observed. 1 In in ADP IN _ _ _ _ _ 2 lymphoblastoid lymphoblastoid ADJ JJ Degree=Pos _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 exemplify exemplify VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 intermediate intermediate ADJ JJ Degree=Pos _ _ _ _ 10 stage stage NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 8862 # text = The findings in the human multiple myeloma cell lines represent the first examples of B cells with downregulated PU.1 expression and apparently contradict observations in the murine system in which PU.1 is expressed and active in plasmacytoma cell lines. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 7 myeloma myeloma NOUN NN Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 lines line NOUN NNS Number=Plur _ _ _ _ 10 represent represent VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 13 examples example NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 B b ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 downregulated downregulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 apparently apparently ADV RB _ _ _ _ _ 23 contradict contradict VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 observations observation NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 murine murine NOUN NN Number=Sing _ _ _ _ 28 system system NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 which which PRON WDT PronType=Rel _ _ _ _ 31 PU.1 PU.1 PROPN NNP Number=Sing _ _ _ _ 32 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 expressed expressed ADJ JJ Degree=Pos _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 active active ADJ JJ Degree=Pos _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 plasmacytoma plasmacytoma NOUN NN Number=Sing _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 8863 # text = At present, it is unclear whether the lack of PU.1 expression and activity in human multiple myeloma cell lines represents a malignancy-associated defect in these cells or exemplifies a normal developmental regulation in terminally differentiated B cells. 1 At at ADP IN _ _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 unclear unclear ADJ JJ Degree=Pos _ _ _ _ 7 whether whether SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 lack lack NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 PU.1 Pu.1 NUM CD NumType=Card _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 18 myeloma myeloma NOUN NN Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 lines line NOUN NNS Number=Plur _ _ _ _ 21 represents represent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 malignancy malignancy NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 defect defect NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 exemplifies exemplify NOUN NNS Number=Plur _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 normal normal ADJ JJ Degree=Pos _ _ _ _ 34 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 35 regulation regulation NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 terminally terminally ADV RB _ _ _ _ _ 38 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 B b ADJ JJ Degree=Pos _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8864 # text = Document 0030011591 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011591 0030011591 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8865 # text = Expression of v-src in T cells correlates with nuclear expression of NF-kappa B. NF-kappa B is a rapidly inducible transcriptional activator that responds to a variety of signals and influences the expression of many genes involved in the immune response. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 v- v- SYM NFP _ _ _ _ SpaceAfter=No 4 src src NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n 18 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 rapidly rapidly ADV RB _ _ _ _ _ 25 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 26 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 27 activator activator NOUN NN Number=Sing _ _ _ _ 28 that that PRON WDT PronType=Rel _ _ _ _ 29 responds respond VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 variety variety NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 signals signal NOUN NNS Number=Plur _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 influences influence VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 expression expression NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 many many ADJ JJ Degree=Pos _ _ _ _ 41 genes gene NOUN NNS Number=Plur _ _ _ _ 42 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 immune immune ADJ JJ Degree=Pos _ _ _ _ 46 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 8866 # text = Protein tyrosine kinases transmit signals from cytokine and immune receptors. 1 Protein protein VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 2 tyrosine tyrosine PRON PRP _ _ _ _ _ 3 kinases kinase NOUN NNS Number=Plur _ _ _ _ 4 transmit transmit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 signals signal NOUN NNS Number=Plur _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 immune immune ADJ JJ Degree=Pos _ _ _ _ 10 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 8867 # text = Very little information exists linking these two important classes of signaling molecules. 1 Very very ADV RB _ _ _ _ _ 2 little little ADJ JJ Degree=Pos _ _ _ _ 3 information information NOUN NN Number=Sing _ _ _ _ 4 exists exist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 linking link VERB VBG VerbForm=Ger _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 important important ADJ JJ Degree=Pos _ _ _ _ 9 classes class NOUN NNS Number=Plur _ _ _ _ 10 of of SCONJ IN _ _ _ _ _ 11 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 12 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 8868 # text = We now demonstrate that v-src expression correlates with nuclear expression of a kappa 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 now now ADV RB _ _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 v- v- SYM NFP _ _ _ _ SpaceAfter=No 6 src src ADJ JJ Degree=Pos _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 correlates correlate NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 8869 # text = B binding complex similar to that induced by phorbol ester and ionomycin, as detected by electrophoretic mobility shift assay using a variety of kappa B sites. 1 B b X LS _ _ _ _ _ 2 binding bind VERB VBG VerbForm=Ger _ _ _ _ 3 complex complex ADJ JJ Degree=Pos _ _ _ _ 4 similar similar ADJ JJ Degree=Pos _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 10 ester ester NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 ionomycin ionomycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 as as SCONJ IN _ _ _ _ _ 15 detected detect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 18 mobility mobility NOUN NN Number=Sing _ _ _ _ 19 shift shift NOUN NN Number=Sing _ _ _ _ 20 assay assay NOUN NN Number=Sing _ _ _ _ 21 using use VERB VBG VerbForm=Ger _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 variety variety NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 8870 # text = This complex was blocked by the tyrosine kinase inhibitor, herbimycin A. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 complex complex NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 8 kinase kinase NOUN NN Number=Sing _ _ _ _ 9 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 herbimycin herbimycin NOUN NN Number=Sing _ _ _ _ 12 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 8871 # text = The v-src-induced complex comprised the p50 and p65 components of NF-kappa B, as determined by supershift and immunoblot analysis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 v- v- SYM NFP _ _ _ _ SpaceAfter=No 3 src-induced src-induce ADJ JJ Degree=Pos _ _ _ _ 4 complex complex NOUN NN Number=Sing _ _ _ _ 5 comprised comprise VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 p50 p50 NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 p65 p65 NOUN NN Number=Sing _ _ _ _ 10 components component NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa PROPN NNP Number=Sing _ _ _ _ 15 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 as as SCONJ IN _ _ _ _ _ 18 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 supershift supershift NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 immunoblot immunoblot ADJ JJ Degree=Pos _ _ _ _ 23 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 8872 # text = As a functional correlate of this finding, transient co-transfection of HIV-1 LTR reporter constructs in a different T cell line demonstrated that v-src activated this promoter in a kappa B-dependent manner. 1 As as ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 functional functional ADJ JJ Degree=Pos _ _ _ _ 4 correlate correlate NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 finding finding NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 transient transient ADJ JJ Degree=Pos _ _ _ _ 10 co-transfection co-transfection NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 LTR Ltr ADJ JJR Degree=Cmp _ _ _ _ 16 reporter reporter NOUN NN Number=Sing _ _ _ _ 17 constructs construct VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 different different ADJ JJ Degree=Pos _ _ _ _ 21 T T PROPN NNP Number=Sing _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 line line NOUN NN Number=Sing _ _ _ _ 24 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 v- v- SYM NFP _ _ _ _ SpaceAfter=No 27 src src NOUN NN Number=Sing _ _ _ _ 28 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 30 promoter promoter NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 kappa kappa NOUN NN Number=Sing _ _ _ _ 34 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 37 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 8873 # text = We found that transactivation of the HIV-1 LTR by v-src was more sensitive to mutations of the proximal, rather than the distal, kappa B element. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 LTR Ltr NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 v- v- SYM NFP _ _ _ _ SpaceAfter=No 13 src src NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 more more ADV RBR _ _ _ _ _ 16 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 mutations mutation NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 proximal proximal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 rather rather ADV RB _ _ _ _ _ 24 than than ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 distal distal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 kappa kappa ADP IN _ _ _ _ _ 29 B b ADJ JJ Degree=Pos _ _ _ _ 30 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 8874 # text = The implications for T cell receptor signaling and HIV-1 gene expression are considered. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 implications implication NOUN NNS Number=Plur _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 signaling signaling NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 considered consider VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8875 # text = Document 0030011592 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011592 0030011592 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8876 # text = Comparison of constitutive and inducible transcriptional enhancement mediated by kappa B-related sequences: modulation of activity in B cells by human T-cell leukemia virus type I tax gene. 1 Comparison Comparison NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 8 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B- B- SYM SYM _ _ _ _ SpaceAfter=No 12 related relate ADJ JJ Degree=Pos _ _ _ _ 13 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 : : PUNCT : _ _ _ _ _ 15 modulation modulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 B b ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 26 virus virus NOUN NN Number=Sing _ _ _ _ 27 type type NOUN NN Number=Sing _ _ _ _ 28 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 29 tax tax NOUN NN Number=Sing _ _ _ _ 30 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8877 # text = The kappa B sequence (GGGACTTTCC) binds a factor, NF-kappa B, that is constitutively found in its functional, DNA binding form only in B lymphocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 kappa kappa NOUN NN Number=Sing _ _ _ _ 3 B b NOUN NN Number=Sing _ _ _ _ 4 sequence sequence NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 GGGACTTTCC GGGACTTTCC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa PROPN NNP Number=Sing _ _ _ _ 15 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 constitutively constitutively ADV RB _ _ _ _ _ 20 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 23 functional functional ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 DNA dna NOUN NN Number=Sing _ _ _ _ 26 binding bind VERB VBG VerbForm=Ger _ _ _ _ 27 form from NOUN NN Number=Sing _ _ _ _ 28 only only ADV RB _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 B b ADJ JJ Degree=Pos _ _ _ _ 31 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 8878 # text = A factor with apparently indistinguishable sequence specificity can be induced in many other cell types, where it is used to regulate inducible gene expression. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 apparently apparently ADV RB _ _ _ _ _ 5 indistinguishable indistinguishable ADJ JJ Degree=Pos _ _ _ _ 6 sequence sequence NOUN NN Number=Sing _ _ _ _ 7 specificity specificity NOUN NN Number=Sing _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 many many ADJ JJ Degree=Pos _ _ _ _ 13 other other ADJ JJ Degree=Pos _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 where where ADV WRB PronType=Rel _ _ _ _ 18 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 23 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 8879 # text = For example, kappa B-related sequences have been shown to be important for the transcription of a few inducible genes, such as the interleukin 2 receptor alpha-chain gene and the beta-interferon gene. 1 For for ADP IN _ _ _ _ _ 2 example example NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B- B- PUNCT : _ _ _ _ SpaceAfter=No 6 related related ADJ JJ Degree=Pos _ _ _ _ 7 sequences sequence NOUN NNS Number=Plur _ _ _ _ 8 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 10 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 important important ADJ JJ Degree=Pos _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 few few ADJ JJ Degree=Pos _ _ _ _ 20 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 such such ADJ JJ Degree=Pos _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 27 2 2 NUM CD NumType=Card _ _ _ _ 28 receptor receptor NOUN NN Number=Sing _ _ _ _ 29 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 chain chain NOUN NN Number=Sing _ _ _ _ 32 gene gene NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 interferon interferon NOUN NN Number=Sing _ _ _ _ 38 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 8880 # text = However, these genes are not constitutively active in B lymphocytes, suggesting that other regulatory mechanisms must play a role in determining the patterns of expression. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 genes gene NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 constitutively constitutively ADV RB _ _ _ _ _ 8 active active ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 B b ADJ JJ Degree=Pos _ _ _ _ 11 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 other other ADJ JJ Degree=Pos _ _ _ _ 16 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 17 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 18 must must AUX MD VerbForm=Fin _ _ _ _ 19 play play VERB VB VerbForm=Inf _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 role role NOUN NN Number=Sing _ _ _ _ 22 in in SCONJ IN _ _ _ _ _ 23 determining determine VERB VBG VerbForm=Ger _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 patterns pattern NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 8881 # text = We have investigated the constitutive and inducible transcriptional activity mediated by five kappa B-related sequence elements in two different cell types. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 five five NUM CD NumType=Card _ _ _ _ 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B- B- SYM SYM _ _ _ _ SpaceAfter=No 15 related related ADJ JJ Degree=Pos _ _ _ _ 16 sequence sequence NOUN NN Number=Sing _ _ _ _ 17 elements element NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 two two NUM CD NumType=Card _ _ _ _ 20 different different ADJ JJ Degree=Pos _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 8882 # text = We show that in S194 plasma cells the activity of each element correlates well with the relative affinity of B-cell-derived NF-kappa B for that element. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 S194 S194 NUM CD NumType=Card _ _ _ _ 6 plasma plasma NOUN NN Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 each each DET DT _ _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ _ 13 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 well well ADV RB Degree=Pos _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 relative relative ADJ JJ Degree=Pos _ _ _ _ 18 affinity affinity NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 B- B- NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa NOUN NN Number=Sing _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 30 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 8883 # text = This leads to significantly lower transcription enhancement by sites derived from the interleukin 2 receptor or T-cell receptor genes in S194 cells. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 significantly significantly ADV RB _ _ _ _ _ 5 lower lower VERB VB VerbForm=Inf _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 sites site NOUN NNS Number=Plur _ _ _ _ 10 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 14 2 2 NUM CD NumType=Card _ _ _ _ 15 receptor receptor NOUN NN Number=Sing _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 receptor receptor NOUN NN Number=Sing _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 S194 S194 PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 8884 # text = However, in either EL-4 (T) cells or S194 cells, both lower-affinity sites can be significantly induced by the tax gene product of human T-cell leukemia virus type I, showing that NF-kappa B activity can be modulated even in a B-cell line that constitutively expresses this factor. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 either either DET DT _ _ _ _ _ 5 EL EL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 4 4 NUM CD NumType=Card _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 T t NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 S194 S194 NOUN NN Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 both both CCONJ CC _ _ _ _ _ 17 lower lower ADJ JJR Degree=Cmp _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 affinity affinity NOUN NN Number=Sing _ _ _ _ 20 sites site NOUN NNS Number=Plur _ _ _ _ 21 can can AUX MD VerbForm=Fin _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 significantly significantly ADV RB _ _ _ _ _ 24 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 tax tax NOUN NN Number=Sing _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 product product NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 human human ADJ JJ Degree=Pos _ _ _ _ 32 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 cell cell NOUN NN Number=Sing _ _ _ _ 34 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 35 virus virus NOUN NN Number=Sing _ _ _ _ 36 type type NOUN NN Number=Sing _ _ _ _ 37 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 showing show VERB VBG VerbForm=Ger _ _ _ _ 40 that that SCONJ IN _ _ _ _ _ 41 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 kappa kappa NOUN NN Number=Sing _ _ _ _ 44 B b NOUN NN Number=Sing _ _ _ _ 45 activity activity NOUN NN Number=Sing _ _ _ _ 46 can can AUX MD VerbForm=Fin _ _ _ _ 47 be be AUX VB VerbForm=Inf _ _ _ _ 48 modulated modulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 49 even even ADV RB _ _ _ _ _ 50 in in ADP IN _ _ _ _ _ 51 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 52 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 54 cell cell NOUN NN Number=Sing _ _ _ _ 55 line line NOUN NN Number=Sing _ _ _ _ 56 that that PRON WDT PronType=Rel _ _ _ _ 57 constitutively constitutively ADV RB _ _ _ _ _ 58 expresses expresse VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 59 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 60 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8885 # text = Document 0030011593 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011593 0030011593 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8886 # text = Cell-specific differences in activation of NF-kappa B regulatory elements of human immunodeficiency virus and beta interferon promoters by tumor necrosis factor. 1 Cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 specific specific ADJ JJ Degree=Pos _ _ _ _ 4 differences difference NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B b PROPN NNP Number=Sing _ _ _ _ 12 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 13 elements element NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 17 virus virus NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 beta beta NOUN NN Number=Sing _ _ _ _ 20 interferon interferon ADP IN _ _ _ _ _ 21 promoters promoter NOUN NNS Number=Plur _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 tumor tumor NOUN NN Number=Sing _ _ _ _ 24 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8887 # text = Three aspects of the involvement of tumor necrosis factor in human immunodeficiency virus (HIV) pathogenesis were examined. 1 Three three NUM CD NumType=Card _ _ _ _ 2 aspects aspect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 involvement involvement NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 tumor tumor NOUN NN Number=Sing _ _ _ _ 8 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 13 virus virus NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 18 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 8888 # text = Tumor necrosis factor alpha (TNF-alpha) mRNA production was analyzed by polymerase chain reaction amplification in monocytic U937 cells and in a chronically HIV infected U937 cell line (U9-IIIB). 1 Tumor tumor ADP IN _ _ _ _ _ 2 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 alpha alpha NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 11 production production NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 16 chain chain NOUN NN Number=Sing _ _ _ _ 17 reaction reaction NOUN NN Number=Sing _ _ _ _ 18 amplification amplification NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 21 U937 U937 NUM CD NumType=Card _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 chronically chronically ADV RB _ _ _ _ _ 27 HIV haHive AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 U937 U937 NUM CD NumType=Card _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 line line NOUN NN Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 U9- u9- NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 IIIB Iiib NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 8889 # text = TNF-alpha RNA was undetectable in U937 cells, whereas a low constitutive level was detected in U9-IIIB cells. 1 TNF Tnf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 alpha alpha PROPN NNP Number=Sing _ _ _ _ 4 RNA RNa PROPN NNP Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 undetectable undetectable ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 U937 U937 NUM CD NumType=Card _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 whereas whereas SCONJ IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 low low ADJ JJ Degree=Pos _ _ _ _ 14 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 15 level level NOUN NN Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 U9- U9- SYM NFP _ _ _ _ SpaceAfter=No 20 IIIB Iiib ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 8890 # text = Paramyxovirus infection induced a 5- to 10-fold increase in the steady-state level of TNF-alpha RNA in U9-IIIB cells compared with U937 cells, suggesting that HIV-infected monocytic cells produced higher levels of TNF-alpha than did normal cells after a secondary virus infection. 1 Paramyxovirus Paramyxovirus NOUN NN Number=Sing _ _ _ _ 2 infection infection NOUN NN Number=Sing _ _ _ _ 3 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 fold fold NOUN NN Number=Sing _ _ _ _ 11 increase increase NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 steady steady ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 state state NOUN NN Number=Sing _ _ _ _ 17 level level NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 alpha alpha PROPN NNP Number=Sing _ _ _ _ 22 RNA RNA PROPN NNP Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 U9 U9 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 IIIB IIIB PROPN NNP Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 U937 U937 NOUN NN Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 34 that that SCONJ IN _ _ _ _ _ 35 HIV- HIV- SYM NFP _ _ _ _ SpaceAfter=No 36 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ _ 39 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 higher higher ADJ JJR Degree=Cmp _ _ _ _ 41 levels level NOUN NNS Number=Plur _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 alpha alpha PROPN NNP Number=Sing _ _ _ _ 46 than than ADP IN _ _ _ _ _ 47 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 48 normal normal ADJ JJ Degree=Pos _ _ _ _ 49 cells cell NOUN NNS Number=Plur _ _ _ _ 50 after after ADP IN _ _ _ _ _ 51 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 52 secondary secondary ADJ JJ Degree=Pos _ _ _ _ 53 virus virus NOUN NN Number=Sing _ _ _ _ 54 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 8891 # text = The effects of TNF-alpha on gene expression were examined by transient expression assays using reporter chloramphenicol acetyltransferase plasmids linked to regulatory elements from the HIV long terminal repeat (LTR) and the beta interferon promoter. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 transient transient ADJ JJ Degree=Pos _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 assays assays VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 using use VERB VBG VerbForm=Ger _ _ _ _ 17 reporter reporter NOUN NN Number=Sing _ _ _ _ 18 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 19 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 20 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 21 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 24 elements element NOUN NNS Number=Plur _ _ _ _ 25 from from ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 HIV HIV PROPN NNP Number=Sing _ _ _ _ 28 long long ADJ JJ Degree=Pos _ _ _ _ 29 terminal terminal NOUN NN Number=Sing _ _ _ _ 30 repeat repeat NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 beta beta NOUN NN Number=Sing _ _ _ _ 37 interferon interferon ADP IN _ _ _ _ _ 38 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 8892 # text = In U937 and Jurkat T lymphoid cells, the inducibility of the different hybrid promoters by TNF-alpha or phorbol ester varied in a cell type- and promoter context-specific manner; the levels of gene activity of NF-kappa B-containing plasmids correlated directly with induction of NF-kappa B DNA-binding activity. 1 In in ADP IN _ _ _ _ _ 2 U937 U937 NUM CD NumType=Card _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 5 T T PROPN NNP Number=Sing _ _ _ _ 6 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 inducibility inducibility NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 different different ADJ JJ Degree=Pos _ _ _ _ 14 hybrid hybrid NOUN NN Number=Sing _ _ _ _ 15 promoters promoter NOUN NNS Number=Plur _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 alpha alpha NOUN NN Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 22 ester ester NOUN NN Number=Sing _ _ _ _ 23 varied vary VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 promoter promoter NOUN NN Number=Sing _ _ _ _ 31 context context NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 specific specific ADJ JJ Degree=Pos _ _ _ _ 34 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ; ; PUNCT , _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 levels level NOUN NNS Number=Plur _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 gene gene ADJ JJ Degree=Pos _ _ _ _ 40 activity activity NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 kappa kappa PROPN NNP Number=Sing _ _ _ _ 45 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 containing contain VERB VBG VerbForm=Ger _ _ _ _ 48 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 49 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 directly directly ADV RB _ _ _ _ _ 51 with with ADP IN _ _ _ _ _ 52 induction induction NOUN NN Number=Sing _ _ _ _ 53 of of ADP IN _ _ _ _ _ 54 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 55 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 56 kappa kappa PROPN NNP Number=Sing _ _ _ _ 57 B b PROPN NNP Number=Sing _ _ _ _ 58 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 60 binding binding VERB VBG VerbForm=Ger _ _ _ _ 61 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 62 . . PUNCT . _ _ _ _ _ # sent_id = 8893 # text = Although the intact beta interferon promoter was only weakly stimulated by phorbol ester or TNF-alpha, multimers of the PRDII NF-kappa B-binding domain were inducible by both agents. 1 Although although SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 intact intact NOUN NN Number=Sing _ _ _ _ 4 beta beta NOUN NN Number=Sing _ _ _ _ 5 interferon interferon NOUN NN Number=Sing _ _ _ _ 6 promoter promoter NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 only only ADV RB _ _ _ _ _ 9 weakly weakly ADV RB _ _ _ _ _ 10 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 13 ester ester NOUN NN Number=Sing _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 multimers multimer NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 PRDII PRDII PROPN NNP Number=Sing _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa PROPN NNP Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 binding binding VERB VBG VerbForm=Ger _ _ _ _ 29 domain domain NOUN NN Number=Sing _ _ _ _ 30 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 both both DET DT _ _ _ _ _ 34 agents agent NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 8894 # text = TNF-alpha was able to increase expression of the HIV LTR in T cells, but in monocytic cells, TNF-alpha did not induce the HIV LTR above a constitutive level of activity. 1 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 alpha alpha NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 able able ADJ JJ Degree=Pos _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 increase increase VERB VB VerbForm=Inf _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 HIV HIV PROPN NNP Number=Sing _ _ _ _ 12 LTR LTR PROPN NNP Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 alpha alpha NOUN NN Number=Sing _ _ _ _ 25 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 not not PART RB _ _ _ _ _ 27 induce induce VERB VB VerbForm=Inf _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 HIV HIV PROPN NNP Number=Sing _ _ _ _ 30 LTR LTR PROPN NNP Number=Sing _ _ _ _ 31 above above ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 34 level level NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 8895 # text = This level of NF-kappa B-independent activity appears to be sufficient for virus multiplication, since TNF-alpha treatment had no effect on the kinetics of de novo HIV type 1 (HIV-1) infection and viral RNA production in U937 cells. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 level level NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 independent independent ADJ JJ Degree=Pos _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ _ 17 multiplication multiplication NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 since since SCONJ IN _ _ _ _ _ 20 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 alpha alpha NOUN NN Number=Sing _ _ _ _ 23 treatment treatment NOUN NN Number=Sing _ _ _ _ 24 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 no no DET DT _ _ _ _ _ 26 effect effect NOUN NN Number=Sing _ _ _ _ 27 on on ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 de de PROPN NNP Number=Sing _ _ _ _ 32 novo novo PROPN NNP Number=Sing _ _ _ _ 33 HIV HIV PROPN NNP Number=Sing _ _ _ _ 34 type type NOUN NN Number=Sing _ _ _ _ 35 1 1 NUM CD NumType=Card _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 infection infection NOUN NN Number=Sing _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 viral viral ADJ JJ Degree=Pos _ _ _ _ 44 RNA RNa PROPN NNP Number=Sing _ _ _ _ 45 production production NOUN NN Number=Sing _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 U937 U937 NUM CD NumType=Card _ _ _ _ 48 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 8896 # text = However, in Jurkat cells, TNF-alpha dramatically enhanced the spread of HIV-1 through the cell population and increased viral RNA synthesis, indicating that in T cells HIV-1 multiplication was stimulated by TNF-alpha treatment. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 alpha alpha X FW Foreign=Yes _ _ _ _ 10 dramatically dramatically ADV RB _ _ _ _ _ 11 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 spread spread NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 through through ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 population population NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 viral viral ADJ JJ Degree=Pos _ _ _ _ 25 RNA RNa NOUN NN Number=Sing _ _ _ _ 26 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 29 that that SCONJ IN _ _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 HIV Hiv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ _ 36 multiplication multiplication NOUN NN Number=Sing _ _ _ _ 37 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 38 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 by by ADP IN _ _ _ _ _ 40 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT , _ _ _ _ SpaceAfter=No 42 alpha alpha ADP IN _ _ _ _ _ 43 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8897 # text = Document 0030011601 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011601 0030011601 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8898 # text = Polymorphic nucleotides within the human IL-4 promoter that mediate overexpression of the gene. 1 Polymorphic Polymorphic ADJ JJ Degree=Pos _ _ _ _ 2 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 3 within within ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 4 4 NUM CD NumType=Card _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 mediate mediate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8899 # text = Atopy, which predisposes individuals to develop asthma, severe systemic anaphylaxis, and atopic dermatitis, is usually associated with dramatically elevated total serum IgE levels and is thought to be controlled by a major susceptibility gene and multiple minor susceptibility genes. 1 Atopy Atopy INTJ UH _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 which which PRON WDT PronType=Rel _ _ _ _ 4 predisposes predispose VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 individuals individual NOUN NNS Number=Plur _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 develop develop VERB VB VerbForm=Inf _ _ _ _ 8 asthma asthma NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 severe severe ADJ JJ Degree=Pos _ _ _ _ 11 systemic systemic ADJ JJ Degree=Pos _ _ _ _ 12 anaphylaxis anaphylaxis NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 atopic atopic ADJ JJ Degree=Pos _ _ _ _ 16 dermatitis dermatitis NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 usually usually ADV RB _ _ _ _ _ 20 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 dramatically dramatically ADV RB _ _ _ _ _ 23 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 total total ADJ JJ Degree=Pos _ _ _ _ 25 serum serum NOUN NN Number=Sing _ _ _ _ 26 IgE Ige NOUN NN Number=Sing _ _ _ _ 27 levels level NOUN NNS Number=Plur _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 be be AUX VB VerbForm=Inf _ _ _ _ 33 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 major major ADJ JJ Degree=Pos _ _ _ _ 37 susceptibility susceptibility NOUN NN Number=Sing _ _ _ _ 38 gene gene NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 41 minor minor ADJ JJ Degree=Pos _ _ _ _ 42 susceptibility susceptibility NOUN NN Number=Sing _ _ _ _ 43 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 8900 # text = A recent sib-pair analysis revealed a tight linkage between markers on 5q31.1 and a major susceptibility gene controlling total serum IgE levels. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 recent recent ADJ JJ Degree=Pos _ _ _ _ 3 sib-pair sib-pair ADJ JJ Degree=Pos _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 tight tight ADJ JJ Degree=Pos _ _ _ _ 8 linkage linkage NOUN NN Number=Sing _ _ _ _ 9 between between ADP IN _ _ _ _ _ 10 markers marker NOUN NNS Number=Plur _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 5q31.1 5q31.1 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 major major ADJ JJ Degree=Pos _ _ _ _ 16 susceptibility susceptibility NOUN NN Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 controlling control VERB VBG VerbForm=Ger _ _ _ _ 19 total total ADJ JJ Degree=Pos _ _ _ _ 20 serum serum NOUN NN Number=Sing _ _ _ _ 21 IgE Ige NOUN NN Number=Sing _ _ _ _ 22 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 8901 # text = Due to its location within this cluster and its biologic role in Ig class switching and Th2 cell differentiation, the IL-4 gene has emerged as one major candidate for the atopy gene. 1 Due due ADP IN _ _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 4 location location NOUN NN Number=Sing _ _ _ _ 5 within within ADP IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 cluster cluster NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 10 biologic biologic ADJ JJ Degree=Pos _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 Ig ig PROPN NNP Number=Sing _ _ _ _ 14 class class NOUN NN Number=Sing _ _ _ _ 15 switching switching VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 Th2 Th2 NUM CD NumType=Card _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 4 4 NUM CD NumType=Card _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 emerged emerge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 as as ADP IN _ _ _ _ _ 29 one one NUM CD NumType=Card _ _ _ _ 30 major major ADJ JJ Degree=Pos _ _ _ _ 31 candidate candidate NOUN NN Number=Sing _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 atopy atopy ADJ JJ Degree=Pos _ _ _ _ 35 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 8902 # text = In one model, polymorphisms within IL-4 regulatory elements might result in overexpression of the gene, amplifying Th2 cell differentiation and class switching to IgE. 1 In in ADP IN _ _ _ _ _ 2 one one NUM CD NumType=Card _ _ _ _ 3 model model NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 polymorphisms polymorphism NOUN NNS Number=Plur _ _ _ _ 6 within within ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 4 4 NUM CD NumType=Card _ _ _ _ 10 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 11 elements element NOUN NNS Number=Plur _ _ _ _ 12 might might AUX MD VerbForm=Fin _ _ _ _ 13 result result VERB VB VerbForm=Inf _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 amplifying amplify VERB VBG VerbForm=Ger _ _ _ _ 21 Th2 Th2 NUM CD NumType=Card _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 class class NOUN NN Number=Sing _ _ _ _ 26 switching switch VERB VBG VerbForm=Ger _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 IgE IgE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 8903 # text = In support of this model, we report that the human IL-4 promoter exists in multiple allelic forms that exhibit distinct transcriptional activities in IL-4-positive T cells. 1 In in ADP IN _ _ _ _ _ 2 support support NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 model model NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 8 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 4 4 NUM CD NumType=Card _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 exists exist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 19 allelic allelic ADJ JJ Degree=Pos _ _ _ _ 20 forms form NOUN NNS Number=Plur _ _ _ _ 21 that that PRON WDT PronType=Rel _ _ _ _ 22 exhibit exhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 24 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 25 activities activity NOUN NNS Number=Plur _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 positive positive ADJ JJ Degree=Pos _ _ _ _ 32 T t PROPN NNP Number=Sing _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 8904 # text = A particular allele has an unusually high transcriptional activity. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 particular particular ADJ JJ Degree=Pos _ _ _ _ 3 allele allele NOUN NN Number=Sing _ _ _ _ 4 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 unusually unusually ADV RB _ _ _ _ _ 7 high high ADJ JJ Degree=Pos _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 8905 # text = A nucleotide substitution within a recently described OAP40 element located just upstream of an NF-AT site (P sequence) appears to be largely responsible for the increased promotor strength of this particular allelic form of the IL-4 promoter. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 nucleotide nucleotide ADJ JJ Degree=Pos _ _ _ _ 3 substitution substitution NOUN NN Number=Sing _ _ _ _ 4 within within ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 recently recently ADV RB _ _ _ _ _ 7 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 OAP40 OAP40 NUM CD NumType=Card _ _ _ _ 9 element element NOUN NN Number=Sing _ _ _ _ 10 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 just just ADV RB _ _ _ _ _ 12 upstream upstream NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 AT at PROPN NNP Number=Sing _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 P p NOUN NN Number=Sing _ _ _ _ 21 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 be be AUX VB VerbForm=Inf _ _ _ _ 26 largely largely ADV RB _ _ _ _ _ 27 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 promotor promotor NOUN NN Number=Sing _ _ _ _ 32 strength strength NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 35 particular particular ADJ JJ Degree=Pos _ _ _ _ 36 allelic allelic ADJ JJ Degree=Pos _ _ _ _ 37 form form NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 4 4 NUM CD NumType=Card _ _ _ _ 43 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 8906 # text = In EMSAs, this substitution results in a markedly enhanced affinity for sequence-specific complexes exhibiting an AP-1 specificity. 1 In in ADP IN _ _ _ _ _ 2 EMSAs EMSAs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 substitution substitution NOUN NN Number=Sing _ _ _ _ 6 results result NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 markedly markedly ADV RB _ _ _ _ _ 10 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 affinity affinity NOUN NN Number=Sing _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 specific specific ADJ JJ Degree=Pos _ _ _ _ 16 complexes complex NOUN NNS Number=Plur _ _ _ _ 17 exhibiting exhibit VERB VBG VerbForm=Ger _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 specificity specificity NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 8907 # text = The identification of allelic nucleotides, which results in overexpression of the IL-4 gene, provides specific targets for a comprehensive screening of atopic and nonatopic individuals and may provide a clue for genetic predisposition for atopy. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 identification identification NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 allelic allelic ADJ JJ Degree=Pos _ _ _ _ 5 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 which which DET WDT PronType=Int _ _ _ _ 8 results result NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 4 4 NUM CD NumType=Card _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 targets target NOUN NNS Number=Plur _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 comprehensive comprehensive ADJ JJ Degree=Pos _ _ _ _ 24 screening screening NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 atopic atopic ADJ JJ Degree=Pos _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 nonatopic nonatopic ADJ JJ Degree=Pos _ _ _ _ 29 individuals individual NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 may may AUX MD VerbForm=Fin _ _ _ _ 32 provide provide VERB VB VerbForm=Inf _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 clue clue NOUN NN Number=Sing _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 37 predisposition predisposition NOUN NN Number=Sing _ _ _ _ 38 for for ADP IN _ _ _ _ _ 39 atopy atopy NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8908 # text = Document 0030011602 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011602 0030011602 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8909 # text = Comparative analysis of NFAT (nuclear factor of activated T cells) complex in human T and B lymphocytes. 1 Comparative Comparative ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 complex complex NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 T T PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 B b ADJ JJ Degree=Pos _ _ _ _ 19 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8910 # text = Nuclear factor of activated T cells (NFAT) is a transcriptional activator that binds to sequences in the interleukin-2 (IL-2) promoter and is thought to be largely responsible for the T cell-specific inducibility of IL-2 expression. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 T T PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 13 activator activator NOUN NN Number=Sing _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 sequences sequence NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 to to PART TO _ _ _ _ _ 33 be be AUX VB VerbForm=Inf _ _ _ _ 34 largely largely ADV RB _ _ _ _ _ 35 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 36 for for ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 T T PROPN NNP Number=Sing _ _ _ _ 39 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 specific specific ADJ JJ Degree=Pos _ _ _ _ 42 inducibility inducibility NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 2 2 NUM CD NumType=Card _ _ _ _ 47 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 8911 # text = Electrophoretic mobility shift assays (EMSA) showed that specific NFAT binding activity could also be induced in human B cells. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assays assay NOUN NNS Number=Plur _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 EMSA EMSA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 10 specific specific ADJ JJ Degree=Pos _ _ _ _ 11 NFAT Nfat SCONJ IN _ _ _ _ _ 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 could could AUX MD VerbForm=Fin _ _ _ _ 15 also also ADV RB _ _ _ _ _ 16 be be AUX VB VerbForm=Inf _ _ _ _ 17 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 B b ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 8912 # text = The B cell NFAT complex, however, was not functional, since it failed to activate transcription from an NFAT-driven chloramphenicol acetyltransferase (CAT) construct. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 B b ADJ JJ Degree=Pos _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 NFAT Nfat NOUN NN Number=Sing _ _ _ _ 5 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 however however ADV RB _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 functional functional ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 since since SCONJ IN _ _ _ _ _ 14 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 15 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 activate activate VERB VB VerbForm=Inf _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 NFAT Nfat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 driven driven VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 25 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 CAT cat NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 construct construct NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 8913 # text = Competition with an AP-1 motif or with anti-Jun and anti-Fos antibodies abolished binding to the NFAT motif in both T and B cells, indicating that Jun and Fos are critical for NFAT complex formation in both cell types. 1 Competition competition NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 motif motif NOUN NN Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 anti-Jun anti-Jun ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 anti-Fos anti-Fos ADJ JJ Degree=Pos _ _ _ _ 13 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 14 abolished abolish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 binding bind VERB VBG VerbForm=Ger _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 19 motif motif NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 both both CCONJ CC _ _ _ _ _ 22 T T PROPN NNP Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 B b ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 28 that that SCONJ IN _ _ _ _ _ 29 Jun Jun PROPN NNP Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 Fos Fos PROPN NNPS Number=Plur _ _ _ _ 32 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 critical critical ADJ JJ Degree=Pos _ _ _ _ 34 for for ADP IN _ _ _ _ _ 35 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 36 complex complex ADJ JJ Degree=Pos _ _ _ _ 37 formation formation NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 both both DET DT _ _ _ _ _ 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 8914 # text = Purified recombinant Jun and Fos proteins failed to bind directly to the NFAT motif. 1 Purified Purify ADJ JJ Degree=Pos _ _ _ _ 2 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 3 Jun Jun PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 Fos Fos PROPN NNP Number=Sing _ _ _ _ 6 proteins protein NOUN NNS Number=Plur _ _ _ _ 7 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 bind bind VERB VB VerbForm=Inf _ _ _ _ 10 directly directly ADV RB _ _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 14 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 8915 # text = However, when combined with unstimulated B or T cell extracts, full-length, but not truncated, Jun/Fos heterodimers were able to form an NFAT complex, indicating the presence of a constitutively expressed nuclear factor(s) in B and T cells necessary for the formation of the NFAT complex in both cell types. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 when when ADV WRB PronType=Int _ _ _ _ 4 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 7 B b PROPN NNP Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cell cell PROPN NNP Number=Sing _ _ _ _ 11 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 full full ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 length length NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 not not ADV RB _ _ _ _ _ 19 truncated truncate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 Jun/ Jun/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 22 Fos Fos PROPN NNP Number=Sing _ _ _ _ 23 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 24 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 able able ADJ JJ Degree=Pos _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 form form VERB VB VerbForm=Inf _ _ _ _ 28 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 30 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 presence presence NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 constitutively constitutively ADV RB _ _ _ _ _ 38 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 40 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 s s X AFX _ _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 B b PROPN NNP Number=Sing _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 T t PROPN NNP Number=Sing _ _ _ _ 48 cells cell NOUN NNS Number=Plur _ _ _ _ 49 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 50 for for ADP IN _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 formation formation NOUN NN Number=Sing _ _ _ _ 53 of of ADP IN _ _ _ _ _ 54 the the DET DT Definite=Def|PronType=Art _ _ _ _ 55 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 56 complex complex NOUN NN Number=Sing _ _ _ _ 57 in in ADP IN _ _ _ _ _ 58 both both DET DT _ _ _ _ _ 59 cell cell NOUN NN Number=Sing _ _ _ _ 60 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ _ # sent_id = 8916 # text = An NFAT oligonucleotide carrying mutations in the 5' purine-rich part of the NFAT sequence failed to form a complex and to compete with the wild type motif for NFAT complex formation in both T and B cells. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 NFAT Nfat NOUN NN Number=Sing _ _ _ _ 3 oligonucleotide oligonucleotide NOUN NN Number=Sing _ _ _ _ 4 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 5 mutations mutation NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ' 's PUNCT `` _ _ _ _ _ 10 purine purine NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 rich rich ADJ JJ Degree=Pos _ _ _ _ 13 part part NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 17 sequence sequence NOUN NN Number=Sing _ _ _ _ 18 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 form form VERB VB VerbForm=Inf _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 complex complex NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 compete compete VERB VB VerbForm=Inf _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 wild wild NOUN NN Number=Sing _ _ _ _ 29 type type NOUN NN Number=Sing _ _ _ _ 30 motif motif NOUN NN Number=Sing _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 33 complex complex ADJ JJ Degree=Pos _ _ _ _ 34 formation formation NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 both both CCONJ CC _ _ _ _ _ 37 T T PROPN NNP Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 B b ADJ JJ Degree=Pos _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 8917 # text = We therefore propose a model whereby a core NFAT complex consisting of Jun, Fos, and a constitutive nuclear factor is formed in both T and B cells, but an additional factor and/or post-translational modification of a factor, missing in B cells, might be required for transactivation by NFAT. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 therefore therefore ADV RB _ _ _ _ _ 3 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 model model NOUN NN Number=Sing _ _ _ _ 6 whereby whereby ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 core core NOUN NN Number=Sing _ _ _ _ 9 NFAT Nfat NOUN NN Number=Sing _ _ _ _ 10 complex complex NOUN NN Number=Sing _ _ _ _ 11 consisting consiste VERB VBG VerbForm=Ger _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 Fos Fos PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 formed form VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 both both DET DT _ _ _ _ _ 26 T t PROPN NNP Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 B b ADJ JJ Degree=Pos _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 but but CCONJ CC _ _ _ _ _ 32 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 additional additional ADJ JJ Degree=Pos _ _ _ _ 34 factor factor NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ SpaceAfter=No 36 / / PUNCT , _ _ _ _ SpaceAfter=No 37 or or CCONJ CC _ _ _ _ _ 38 post-translational post-translational ADJ JJ Degree=Pos _ _ _ _ 39 modification modification NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 missing missing VERB VBG VerbForm=Ger _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 B b ADJ JJ Degree=Pos _ _ _ _ 47 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 might might AUX MD VerbForm=Fin _ _ _ _ 50 be be AUX VB VerbForm=Inf _ _ _ _ 51 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 52 for for ADP IN _ _ _ _ _ 53 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 54 by by ADP IN _ _ _ _ _ 55 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8918 # text = Document 0030011619 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011619 0030011619 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8919 # text = Dimethyldithiocarbamate inhibits in vitro activation of primary human CD4+ T lymphocytes. 1 Dimethyldithiocarbamate Dimethyldithiocarbamate ADJ JJ Degree=Pos _ _ _ _ 2 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 primary primary ADJ JJ Degree=Pos _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 + + SYM SYM _ _ _ _ _ 11 T t NUM CD NumType=Card _ _ _ _ 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8920 # text = Dithiocarbamates (DTC), a diverse group of industrial and therapeutic chemicals, have been reported to inhibit, enhance or have no effect on the immune system. 1 Dithiocarbamates Dithiocarbamates PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 DTC DTC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 diverse diverse ADJ JJ Degree=Pos _ _ _ _ 8 group group NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 industrial industrial ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 13 chemicals chemical NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 17 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 inhibit inhibit NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 enhance enhance NOUN NN Number=Sing _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 no no DET DT _ _ _ _ _ 25 effect effect NOUN NN Number=Sing _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 immune immune ADJ JJ Degree=Pos _ _ _ _ 29 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 8921 # text = These apparent inconsistencies reflect the complexity of the DTCs biological activities and are probably due in part to differences in dose, route of exposure, animal species used and/or specific compound tested. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 apparent apparent ADJ JJ Degree=Pos _ _ _ _ 3 inconsistencies inconsistency NOUN NNS Number=Plur _ _ _ _ 4 reflect reflect VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 complexity complexity NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 DTCs DTC NOUN NNS Number=Plur _ _ _ _ 10 biological biological ADJ JJ Degree=Pos _ _ _ _ 11 activities activity NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 probably probably ADV RB _ _ _ _ _ 15 due due ADP IN _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 part part NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 differences difference NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 route route NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 exposure exposure NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 animal animal NOUN NN Number=Sing _ _ _ _ 28 species species NOUN NNS Number=Plur _ _ _ _ 29 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 and and CCONJ CC _ _ _ _ SpaceAfter=No 31 / / PUNCT , _ _ _ _ SpaceAfter=No 32 or or CCONJ CC _ _ _ _ _ 33 specific specific ADJ JJ Degree=Pos _ _ _ _ 34 compound compound NOUN NN Number=Sing _ _ _ _ 35 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 8922 # text = The studies described herein were undertaken to investigate the immunotoxicity of one member of this family, dimethyldithiocarbamate (DMDTC). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 described describe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 herein herein ADV RB _ _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 undertaken undertaken ADJ JJ Degree=Pos _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 immunotoxicity immunotoxicity NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 one one NUM CD NumType=Card _ _ _ _ 13 member member NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 16 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 dimethyldithiocarbamate dimethyldithiocarbamate NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 DMDTC Dmdtc NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 8923 # text = We demonstrate that 0.1-0.5 microM 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 0.1 0.1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 0.5 0.5 NUM CD NumType=Card _ _ _ _ 7 microM microm NOUN NN Number=Sing _ _ _ _ # sent_id = 8924 # text = DMDTC inhibits TNF-alpha-induced activation of NF-kappaB in primary human CD4+ T cells. 1 DMDTC Dmdtc PROPN NNP Number=Sing _ _ _ _ 2 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 TNF Tnf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 primary primary ADJ JJ Degree=Pos _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 CD4 Cd4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 + + SYM SYM _ _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 8925 # text = This inhibition is not accompanied by a loss in viability, and DMDTC-treated T cells retain other active signaling pathways throughout the exposure duration. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 loss loss NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 viability viability NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 DMDTC DMDTC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 retain retain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 other other ADJ JJ Degree=Pos _ _ _ _ 20 active active ADJ JJ Degree=Pos _ _ _ _ 21 signaling signaling NOUN NN Number=Sing _ _ _ _ 22 pathways pathway NOUN NNS Number=Plur _ _ _ _ 23 throughout throughout ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 exposure exposure NOUN NN Number=Sing _ _ _ _ 26 duration duration NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 8926 # text = The inhibition of NF-kappaB is apparently permanent as DMDTC-treated T cells did not regain normal TNF-alpha activation, even after 72 h in culture. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 apparently apparently ADV RB _ _ _ _ _ 9 permanent permanent ADJ JJ Degree=Pos _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 DMDTC DMDTC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 not not PART RB _ _ _ _ _ 18 regain regain VERB VB VerbForm=Inf _ _ _ _ 19 normal normal ADJ JJ Degree=Pos _ _ _ _ 20 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 alpha alpha NOUN NN Number=Sing _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 even even ADV RB _ _ _ _ _ 26 after after ADP IN _ _ _ _ _ 27 72 72 NUM CD NumType=Card _ _ _ _ 28 h h NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 culture culture NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 8927 # text = DMDTC does not appear to alter NF-kappaB directly as pre-incubation of nuclear extracts with DMDTC does not diminish binding activity of this protein. 1 DMDTC DMDTC NOUN NN Number=Sing _ _ _ _ 2 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 not not PART RB _ _ _ _ _ 4 appear appear VERB VB VerbForm=Inf _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 alter alter VERB VB VerbForm=Inf _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 directly directly ADV RB _ _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 pre-incubation pre-incubation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 extracts extract NOUN NNS Number=Plur _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 DMDTC DMDTC NOUN NN Number=Sing _ _ _ _ 18 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 diminish diminish VERB VB VerbForm=Inf _ _ _ _ 21 binding bind VERB VBG VerbForm=Ger _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 8928 # text = We further demonstrate that 0.1-0.5 microM 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 0.1 0.1 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 0.5 0.5 NUM CD NumType=Card _ _ _ _ 8 microM microm NOUN NN Number=Sing _ _ _ _ # sent_id = 8929 # text = DMDTC inhibits intracellular IL-2 production and decreases surface expression of CD25 (the alpha subunit of the IL-2 receptor) in T cells stimulated with phorbol ester. 1 DMDTC Dmdtc PROPN NNP Number=Sing _ _ _ _ 2 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 intracellular intracelular ADJ JJ Degree=Pos _ _ _ _ 4 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 production production NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 decreases decrease VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 surface surface NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 CD25 CD25 PROPN NNP Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 subunit subunit NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 T t PROPN NNP Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 31 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 8930 # text = These data demonstrate that DMDTC is a potent immunosuppressive compound in vitro. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 DMDTC DMDTC PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 potent potent NOUN NN Number=Sing _ _ _ _ 9 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 10 compound compound NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8931 # text = Document 0030011620 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011620 0030011620 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8932 # text = Distinctive gene expression patterns in human mammary epithelial cells and breast cancers. 1 Distinctive Distinctive ADJ JJ Degree=Pos _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 patterns pattern NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 mammary mammary ADJ JJ Degree=Pos _ _ _ _ 8 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 breast breast NOUN NN Number=Sing _ _ _ _ 12 cancers cancer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8933 # text = cDNA microarrays and a clustering algorithm were used to identify patterns of gene expression in human mammary epithelial cells growing in culture and in primary human breast tumors. 1 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 2 microarrays microarray NOUN NNS Number=Plur _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 clustering clustering NOUN NN Number=Sing _ _ _ _ 6 algorithm algorithm NOUN NN Number=Sing _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 identify identify VERB VB VerbForm=Inf _ _ _ _ 11 patterns pattern NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 mammary mammary ADJ JJ Degree=Pos _ _ _ _ 18 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 growing grow VERB VBG VerbForm=Ger _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 culture culture NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 primary primary ADJ JJ Degree=Pos _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 breast breast NOUN NN Number=Sing _ _ _ _ 28 tumors tumor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 8934 # text = Clusters of coexpressed genes identified through manipulations of mammary epithelial cells in vitro also showed consistent patterns of variation in expression among breast tumor samples. 1 Clusters Cluster NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 coexpressed coexpress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 genes gene NOUN NNS Number=Plur _ _ _ _ 5 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 through through ADP IN _ _ _ _ _ 7 manipulations manipulation NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 mammary mammary ADJ JJ Degree=Pos _ _ _ _ 10 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 vitro vitro PROPN NNP Number=Sing _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 17 patterns pattern NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 variation variation NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 among among ADP IN _ _ _ _ _ 23 breast breast NOUN NN Number=Sing _ _ _ _ 24 tumor tumor NOUN NN Number=Sing _ _ _ _ 25 samples sample NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 8935 # text = By using immunohistochemistry with antibodies against proteins encoded by a particular gene in a cluster, the identity of the cell type within the tumor specimen that contributed the observed gene expression pattern could be determined. 1 By by SCONJ IN _ _ _ _ _ 2 using use VERB VBG VerbForm=Ger _ _ _ _ 3 immunohistochemistry immunohistochemistry NOUN NN Number=Sing _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 6 against against ADP IN _ _ _ _ _ 7 proteins protein NOUN NNS Number=Plur _ _ _ _ 8 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 particular particular ADJ JJ Degree=Pos _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 cluster cluster NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 identity identity NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 type type NOUN NN Number=Sing _ _ _ _ 23 within within ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 tumor tumor NOUN NN Number=Sing _ _ _ _ 26 specimen speciman NOUN NNS Number=Plur _ _ _ _ 27 that that PRON WDT PronType=Rel _ _ _ _ 28 contributed contribute VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 observed observed ADJ JJ Degree=Pos _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ _ 33 pattern pattern NOUN NN Number=Sing _ _ _ _ 34 could could AUX MD VerbForm=Fin _ _ _ _ 35 be be AUX VB VerbForm=Inf _ _ _ _ 36 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 8936 # text = Clusters of genes with coherent expression patterns in cultured cells and in the breast tumors samples could be related to specific features of biological variation among the samples. 1 Clusters Cluster NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 genes gene NOUN NNS Number=Plur _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 coherent coherent ADJ JJ Degree=Pos _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 patterns pattern NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 cultured cultured ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 breast breast NOUN NN Number=Sing _ _ _ _ 15 tumors tumor NOUN NNS Number=Plur _ _ _ _ 16 samples sample NOUN NNS Number=Plur _ _ _ _ 17 could could AUX MD VerbForm=Fin _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 related related ADJ JJ Degree=Pos _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 specific specific ADJ JJ Degree=Pos _ _ _ _ 22 features feature NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 biological biological ADJ JJ Degree=Pos _ _ _ _ 25 variation variation NOUN NN Number=Sing _ _ _ _ 26 among among ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 samples sample NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 8937 # text = Two such clusters were found to have patterns that correlated with variation in cell proliferation rates and with activation of the IFN-regulated signal transduction pathway, respectively. 1 Two two NUM CD NumType=Card _ _ _ _ 2 such such ADJ JJ Degree=Pos _ _ _ _ 3 clusters cluster NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 have have VERB VB VerbForm=Inf _ _ _ _ 8 patterns pattern NOUN NNS Number=Plur _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 correlated correlate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 variation variation NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 16 rates rate NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 signal signal NOUN NN Number=Sing _ _ _ _ 26 transduction transduction NOUN NN Number=Sing _ _ _ _ 27 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 8938 # text = Clusters of genes expressed by stromal cells and lymphocytes in the breast tumors also were identified in this analysis. 1 Clusters Cluster NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 genes gene NOUN NNS Number=Plur _ _ _ _ 4 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 stromal stromal ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 breast breast NOUN NN Number=Sing _ _ _ _ 13 tumors tumor NOUN NNS Number=Plur _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 19 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 8939 # text = These results support the feasibility and usefulness of this systematic approach to studying variation in gene expression patterns in human cancers as a means to dissect and classify solid tumors. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 support support VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 feasibility feasibility NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 usefulness usefulness NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 10 systematic systematic ADJ JJ Degree=Pos _ _ _ _ 11 approach approach NOUN NN Number=Sing _ _ _ _ 12 to to SCONJ IN _ _ _ _ _ 13 studying study VERB VBG VerbForm=Ger _ _ _ _ 14 variation variation NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 gene gene ADJ JJ Degree=Pos _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 patterns pattern NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 cancers cancer NOUN NNS Number=Plur _ _ _ _ 22 as as ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 means means NOUN NN Number=Sing _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 dissect dissect VERB VB VerbForm=Inf _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 classify classify VERB VB VerbForm=Inf _ _ _ _ 29 solid solid ADJ JJ Degree=Pos _ _ _ _ 30 tumors tumor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8940 # text = Document 0030011626 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011626 0030011626 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8941 # text = Nuclear levels of NF-kappaB correlate with syncytium-forming capacity of 8e51 cells, expressing a defective HIV virus. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 correlate correlate NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 syncytium syncytium NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 forming forming VERB VBG VerbForm=Ger _ _ _ _ 12 capacity capacity NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 8e51 8e51 NUM CD NumType=Card _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 expressing express VERB VBG VerbForm=Ger _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 defective defective ADJ JJ Degree=Pos _ _ _ _ 20 HIV Hiv NOUN NN Number=Sing _ _ _ _ 21 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8942 # text = The double NF-kappaB site identified in the LTR of the human immunodeficiency virus-1 (HIV-1) has been demonstrated to be necessary for efficient viral transcription. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 double double ADJ JJ Degree=Pos _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 6 site site NOUN NN Number=Sing _ _ _ _ 7 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 LTR LTR PROPN NNP Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 15 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 X LS _ _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 25 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 be be AUX VB VerbForm=Inf _ _ _ _ 28 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 31 viral viral ADJ JJ Degree=Pos _ _ _ _ 32 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 8943 # text = In this report we present the characterisation of NF-kappaB subunits engaged in complexes binding to the HIV-1 NF-kappaB site in human 8e51 T-cells, that harbour a defective HIV-1. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 present present VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 characterisation characterisation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 12 subunits subunit NOUN NNS Number=Plur _ _ _ _ 13 engaged engage VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 complexes complex NOUN NNS Number=Plur _ _ _ _ 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 25 site site NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 human human ADJ JJ Degree=Pos _ _ _ _ 28 8e51 8e51 NUM CD NumType=Card _ _ _ _ 29 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 that that SCONJ IN _ _ _ _ _ 33 harbour harbour PRON PRP$ Person=2|Poss=Yes|PronType=Prs _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 defective defective ADJ JJ Degree=Pos _ _ _ _ 36 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 8944 # text = At least four different specific NF-kappaB complexes are present in the nucleus of these cells. 1 At at ADV RB _ _ _ _ _ 2 least least ADV RBS Degree=Sup _ _ _ _ 3 four four NUM CD NumType=Card _ _ _ _ 4 different different ADJ JJ Degree=Pos _ _ _ _ 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappab NOUN NN Number=Sing _ _ _ _ 9 complexes complex NOUN NNS Number=Plur _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 present present ADJ JJ Degree=Pos _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 8945 # text = With the use of specific antibodies we have determined the composition of each complex using electrophoretic mobility shift assays. 1 With with ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 use use NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 7 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 8 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 composition composition NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 each each DET DT _ _ _ _ _ 14 complex complex NOUN NN Number=Sing _ _ _ _ 15 using use VERB VBG VerbForm=Ger _ _ _ _ 16 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 17 mobility mobility NOUN NN Number=Sing _ _ _ _ 18 shift shift NOUN NN Number=Sing _ _ _ _ 19 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 8946 # text = The results show the presence of several NF-kappaB family members, with the transactivating RelA being engaged in multiple complexes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 presence presence NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 several several ADJ JJ Degree=Pos _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 11 family family NOUN NN Number=Sing _ _ _ _ 12 members member NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 transactivating transactivating NOUN NN Number=Sing _ _ _ _ 17 RelA Rela NOUN NN Number=Sing _ _ _ _ 18 being be AUX VBG VerbForm=Ger _ _ _ _ 19 engaged engage VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 22 complexes complexe NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 8947 # text = The importance of NF-kappaB complexes in viral functions has been established comparing the level of NF-kappaB DNA-binding complexes with syncytia-forming activity of 8e51 cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 importance importance NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 complexes complexe NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 viral viral ADJ JJ Degree=Pos _ _ _ _ 10 functions function NOUN NNS Number=Plur _ _ _ _ 11 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 13 established establish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 comparing compare VERB VBG VerbForm=Ger _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 level level NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 binding binding VERB VBG VerbForm=Ger _ _ _ _ 24 complexes complex NOUN NNS Number=Plur _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 syncytia syncytia NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 forming forming VERB VBG VerbForm=Ger _ _ _ _ 29 activity activity NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 8e51 8e51 NUM CD NumType=Card _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 8948 # text = In fact, 8e51 cells that had almost lost their syncytia-forming capacity were found to contain at least 10 times less active NF-kappaB DNA-binding complex than the actively fusing cells. 1 In in ADP IN _ _ _ _ _ 2 fact fact NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 8e51 8e51 NUM CD NumType=Card _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 almost almost ADV RB _ _ _ _ _ 9 lost lose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 11 syncytia syncytia NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 -forming -forming VERB VBG VerbForm=Ger _ _ _ _ 13 capacity capacity NOUN NN Number=Sing _ _ _ _ 14 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 contain contain VERB VB VerbForm=Inf _ _ _ _ 18 at at ADV RB _ _ _ _ _ 19 least least ADV RBS Degree=Sup _ _ _ _ 20 10 10 NUM CD NumType=Card _ _ _ _ 21 times time NOUN NNS Number=Plur _ _ _ _ 22 less less ADV RBR Degree=Cmp _ _ _ _ 23 active active ADJ JJ Degree=Pos _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 27 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 binding bind VERB VBG VerbForm=Ger _ _ _ _ 30 complex complex NOUN NN Number=Sing _ _ _ _ 31 than than ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 actively actively ADV RB _ _ _ _ _ 34 fusing fusing ADJ JJ Degree=Pos _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 8949 # text = The correlation is specific as the level of at least three other transcription factors did not change. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 correlation correlation NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 level level NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 at at ADV RB _ _ _ _ _ 10 least least ADV RBS Degree=Sup _ _ _ _ 11 three three NUM CD NumType=Card _ _ _ _ 12 other other ADJ JJ Degree=Pos _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factors factor NOUN NNS Number=Plur _ _ _ _ 15 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 change change VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8950 # text = Document 0030011633 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011633 0030011633 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8951 # text = DNA triplex formation selectively inhibits granulocyte-macrophage colony-stimulating factor gene expression in human T cells. 1 DNA dna NOUN NN Number=Sing _ _ _ _ 2 triplex triplex NOUN NN Number=Sing _ _ _ _ 3 formation formation NOUN NN Number=Sing _ _ _ _ 4 selectively selectively ADV RB _ _ _ _ _ 5 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 9 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 stimulating stimulate VERB VBG VerbForm=Ger _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8952 # text = Granulocyte-macrophage colony-stimulating factor (GM-CSF) is a hemopoietic growth factor that is expressed in activated T cells, fibroblasts, macrophages, and endothelial cells. 1 Granulocyte Granulocyte ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 4 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 stimulating stimulating NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 hemopoietic hemopoietic ADJ JJ Degree=Pos _ _ _ _ 16 growth growth NOUN NN Number=Sing _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 8953 # text = Although GM-CSF does not appear to be essential for normal hemopoiesis, overexpression of GM-CSF has been implicated in the pathogenesis of some diseases such as myeloid leukemia and chronic inflammation. 1 Although although SCONJ IN _ _ _ _ _ 2 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 CSF CSF PROPN NNP Number=Sing _ _ _ _ 5 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 appear appear VERB VB VerbForm=Inf _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 essential essential ADJ JJ Degree=Pos _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 normal normal ADJ JJ Degree=Pos _ _ _ _ 13 hemopoiesis hemopoiesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 CSF CSF PROPN NNP Number=Sing _ _ _ _ 20 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 22 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 some some DET DT _ _ _ _ _ 28 diseases disease NOUN NNS Number=Plur _ _ _ _ 29 such such ADJ JJ Degree=Pos _ _ _ _ 30 as as ADP IN _ _ _ _ _ 31 myeloid myeloid VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 35 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 8954 # text = An NF-kappaB/Rel binding site within the GM-CSF promoter, termed the kappaB element appears to be important for controlling expression in reporter gene assays in response to a number of stimuli in T cells. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 Rel Rel PROPN NNP Number=Sing _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 site site NOUN NN Number=Sing _ _ _ _ 9 within within ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 CSF CSF PROPN NNP Number=Sing _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 termed term VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 19 element element NOUN NN Number=Sing _ _ _ _ 20 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 important important ADJ JJ Degree=Pos _ _ _ _ 24 for for SCONJ IN _ _ _ _ _ 25 controlling control VERB VBG VerbForm=Ger _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 reporter reporter NOUN NN Number=Sing _ _ _ _ 29 gene gene NOUN NN Number=Sing _ _ _ _ 30 assays assay NOUN NNS Number=Plur _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 response response NOUN NN Number=Sing _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 number number NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 T t PROPN NNP Number=Sing _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 8955 # text = We investigated oligonucleotide-directed triple helix formation across this regulatory sequence as a potential tool to inhibit GM-CSF gene transcription. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 oligonucleotide oligonucleotide ADV RB _ _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 triple triple NOUN NN Number=Sing _ _ _ _ 7 helix helix NOUN NN Number=Sing _ _ _ _ 8 formation formation NOUN NN Number=Sing _ _ _ _ 9 across across ADP IN _ _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 12 sequence sequence NOUN NN Number=Sing _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 potential potential ADJ JJ Degree=Pos _ _ _ _ 16 tool tool NOUN NN Number=Sing _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 19 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 CSF CSF PROPN NNP Number=Sing _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 8956 # text = A 15-base oligonucleotide, GM3, was targeted to a purine-rich region in the GM-CSF proximal promoter, which overlaps the kappaB element. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 15 15 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 base base NOUN NN Number=Sing _ _ _ _ 5 oligonucleotide oligonucleotide NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 GM3 GM3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 targeted target VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 purine purine NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 rich rich ADJ JJ Degree=Pos _ _ _ _ 16 region region NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 CSF CSF PROPN NNP Number=Sing _ _ _ _ 22 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 which which PRON WDT PronType=Rel _ _ _ _ 26 overlaps overlaps VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 29 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 8957 # text = Gel mobility shift assays and DNase I footprinting demonstrated that GM3 formed a sequence-specific collinear triplex with its double-stranded DNA target. 1 Gel gel NOUN NN Number=Sing _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assays assay NOUN NNS Number=Plur _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 DNase DNase NOUN NN Number=Sing _ _ _ _ 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 8 footprinting footprint AUX VBG VerbForm=Ger _ _ _ _ 9 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 11 GM3 GM3 NOUN NN Number=Sing _ _ _ _ 12 formed form VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 collinear collinear NOUN NN Number=Sing _ _ _ _ 18 triplex triplex NOUN NN Number=Sing _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 stranded strand VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 DNA dna NOUN NN Number=Sing _ _ _ _ 25 target target NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 8958 # text = Triplex formation by GM3 blocked recombinant and nuclear NF-kappaB proteins binding to the GM-CSF element. 1 Triplex Triplex NOUN NN Number=Sing _ _ _ _ 2 formation formation NOUN NN Number=Sing _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 GM3 GM3 NUM CD NumType=Card _ _ _ _ 5 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 12 proteins protein NOUN NNS Number=Plur _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 CSF CSF PROPN NNP Number=Sing _ _ _ _ 19 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 8959 # text = GM3 also caused selective inhibition of the human T-cell lymphotrophic virus-1 Tax transactivator-induced luciferase activity from a reporter construct driven by the GM-CSF promoter in Jurkat T cells. 1 GM3 GM3 NOUN NN Number=Sing _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 selective selective ADJ JJ Degree=Pos _ _ _ _ 5 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 lymphotrophic lymphotrophic ADJ JJ Degree=Pos _ _ _ _ 12 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 Tax tax NOUN NN Number=Sing _ _ _ _ 16 transactivator transactivator NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 reporter reporter NOUN NN Number=Sing _ _ _ _ 24 construct construct NOUN NN Number=Sing _ _ _ _ 25 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 CSF CSF PROPN NNP Number=Sing _ _ _ _ 31 promoter promoter NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 34 T T PROPN NNP Number=Sing _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 8960 # text = Finally, GM3 greatly reduced the concentration of endogenous GM-CSF mRNA induced by different stimuli in Jurkat T cells but did not affect interleukin 3 mRNA levels in the same cells. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 GM3 GM3 NUM CD NumType=Card _ _ _ _ 4 greatly greatly ADV RB _ _ _ _ _ 5 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 concentration concentration NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 10 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 CSF CSF PROPN NNP Number=Sing _ _ _ _ 13 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 14 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 different different ADJ JJ Degree=Pos _ _ _ _ 17 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 20 T T PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 not not PART RB _ _ _ _ _ 25 affect affect VERB VB VerbForm=Inf _ _ _ _ 26 interleukin interleukin ADJ JJ Degree=Pos _ _ _ _ 27 3 3 NUM CD NumType=Card _ _ _ _ 28 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 29 levels level NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 same same ADJ JJ Degree=Pos _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 8961 # text = We conclude that the kappaB element in the GM-CSF promoter plays a central role in the transcriptional activation of the endogenous GM-CSF gene. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 6 element element NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 CSF CSF PROPN NNP Number=Sing _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 central central ADJ JJ Degree=Pos _ _ _ _ 16 role role NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 24 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 CSF CSF PROPN NNP Number=Sing _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 8962 # text = Colinear triplex formation acts as a selective transcriptional repressor of the GM-CSF gene and may have potential therapeutic application in cases of undesirable overexpression of this protein. 1 Colinear Colinear ADJ JJ Degree=Pos _ _ _ _ 2 triplex triplex NOUN NN Number=Sing _ _ _ _ 3 formation formation NOUN NN Number=Sing _ _ _ _ 4 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 selective selective ADJ JJ Degree=Pos _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 repressor repressor NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 CSF CSF PROPN NNP Number=Sing _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 may may AUX MD VerbForm=Fin _ _ _ _ 18 have have VERB VB VerbForm=Inf _ _ _ _ 19 potential potential ADJ JJ Degree=Pos _ _ _ _ 20 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 21 application application NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 cases cas NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 undesirable undesirable ADJ JJ Degree=Pos _ _ _ _ 26 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8963 # text = Document 0030011637 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011637 0030011637 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8964 # text = Association between expression of intercellular adhesion molecule-1 and integration of human T-cell-leukemia virus type 1 in adult T-cell leukemia cells. 1 Association Association NOUN NN Number=Sing _ _ _ _ 2 between between ADP IN _ _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 intercellular intercellular ADJ JJ Degree=Pos _ _ _ _ 6 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 7 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 integration integration NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 T-cell T-cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 17 virus virus NOUN NN Number=Sing _ _ _ _ 18 type type NOUN NN Number=Sing _ _ _ _ 19 1 1 NUM CD NumType=Card _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 adult adult ADJ JJ Degree=Pos _ _ _ _ 22 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8965 # text = It is known that the expression levels of intercellular adhesion molecule-1 (ICAM-1) in adult T cell leukemia(ATL) cells are high, whereas those in T-lymphoid cells are not. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 levels level NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 intercellular intercellular ADJ JJ Degree=Pos _ _ _ _ 10 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 11 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 ICAM ICAm NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - SYM SYM _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 adult adult ADJ JJ Degree=Pos _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cell cell PROPN NNP Number=Sing _ _ _ _ 23 leukemia leukemia PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 ATL ATL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 whereas whereas SCONJ IN _ _ _ _ _ 32 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 T- T- SYM NFP _ _ _ _ SpaceAfter=No 35 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ _ 37 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 38 not not PART RB _ _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 8966 # text = In order to investigate the factors that influence the induction of ICAM-1 molecules, Northern blot analysis to measure the expression level of ICAM-1 mRNAs and Southern blot hybridization to analyze the integration of human T-cell-leukemia virus type 1 (HTLV-1) provirus were done. 1 In in ADP IN _ _ _ _ _ 2 order order NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 factors factor NOUN NNS Number=Plur _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 influence influence VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 ICAM ICAm NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - SYM SYM _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 18 blot blot ADJ JJ Degree=Pos _ _ _ _ 19 analysis analysis NOUN NN Number=Sing _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 measure measure VERB VB VerbForm=Inf _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 level level NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 mRNAs mRNA NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 Southern Southern ADJ JJ Degree=Pos _ _ _ _ 32 blot blot NOUN NN Number=Sing _ _ _ _ 33 hybridization hybridization NOUN NN Number=Sing _ _ _ _ 34 to to PART TO _ _ _ _ _ 35 analyze analyze VERB VB VerbForm=Inf _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 integration integration NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 human human ADJ JJ Degree=Pos _ _ _ _ 40 T-cell T-cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 43 virus virus NOUN NN Number=Sing _ _ _ _ 44 type type NOUN NN Number=Sing _ _ _ _ 45 1 1 NUM CD NumType=Card _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ _ 51 provirus provirus NOUN NN Number=Sing _ _ _ _ 52 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 53 done do VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 8967 # text = The levels of ICAM-1 mRNA expression of ATL cells were generally higher than those of T-lymphoid cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 ATL Atl ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 generally generally ADV RB _ _ _ _ _ 14 higher higher ADJ JJR Degree=Cmp _ _ _ _ 15 than than ADP IN _ _ _ _ _ 16 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 T- T- SYM NFP _ _ _ _ SpaceAfter=No 19 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 8968 # text = However, ILT-mat cells and ATL16T(-) cells, although they were ATL cells, showed rather low surface ICAM-1 expression and ICAM-1 mRNA expression. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 ILT ILT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 mat mat ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 ATL16T Atl16t NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 -) -) PUNCT . _ _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 although although SCONJ IN _ _ _ _ _ 14 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 ATL Atl ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 rather rather ADV RB _ _ _ _ _ 21 low low ADJ JJ Degree=Pos _ _ _ _ 22 surface surface NOUN NN Number=Sing _ _ _ _ 23 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 8969 # text = Southern blot hybridization showed that only two and four bands were found in ILT-mat and ATL16T(-) cells, respectively, whereas > 10 bands were detected in other ATL cells. 1 Southern southern ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 hybridization hybridization NOUN NN Number=Sing _ _ _ _ 4 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 only only ADV RB _ _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 four four NUM CD NumType=Card _ _ _ _ 10 bands band NOUN NNS Number=Plur _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 ILT ILT ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 mat mat NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 ATL16T Atl16t NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 -) -) PUNCT . _ _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 whereas whereas NOUN NNS Number=Plur _ _ _ _ 26 > > PUNCT , _ _ _ _ _ 27 10 10 NUM CD NumType=Card _ _ _ _ 28 bands band NOUN NNS Number=Plur _ _ _ _ 29 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 other other ADJ JJ Degree=Pos _ _ _ _ 33 ATL Atl ADJ JJ Degree=Pos _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 8970 # text = These results suggest that monoclonal integration of HTLV-1 provirus to the genome of T cell, especially the number of integration sites, is one of the factors for induction of ICAM-1 molecules. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 6 integration integration NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 provirus provirus NOUN NN Number=Sing _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 genome genome NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 especially especially ADV RB _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 number number NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 integration integration NOUN NN Number=Sing _ _ _ _ 24 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 one one NUM CD NumType=Card _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 factors factor NOUN NNS Number=Plur _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 induction induction NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 ICAM ICAm NUM CD NumType=Card _ _ _ SpaceAfter=No 35 - - SYM SYM _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ _ 37 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8971 # text = Document 0030011642 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011642 0030011642 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8972 # text = Induction of nuclear factor kappa B/Rel nuclear activity in human peripheral blood T lymphocytes by anti-HLA class I monoclonal antibodies. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 Rel Rel PROPN NNP Number=Sing _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 14 blood blood NOUN NN Number=Sing _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 anti-HLA anti-hla ADJ JJ Degree=Pos _ _ _ _ 19 class class NOUN NN Number=Sing _ _ _ _ 20 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 21 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 22 antibodies antibody NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8973 # text = Monoclonal antibodies against either monomorphic or polymorphic determinants of class I antigen induced in PBMC and highly purified T lymphocytes the nuclear activity of NF-kappa B/Rel complexes. 1 Monoclonal Monoclonal ADJ JJ Degree=Pos _ _ _ _ 2 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 3 against against ADP IN _ _ _ _ _ 4 either either CCONJ CC _ _ _ _ _ 5 monomorphic monomorphic ADJ JJ Degree=Pos _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 polymorphic polymorphic ADJ JJ Degree=Pos _ _ _ _ 8 determinants determinant NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 class class NOUN NN Number=Sing _ _ _ _ 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 12 antigen antigen NOUN NNS Number=Plur _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 PBMC PBMC PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 highly highly ADV RB _ _ _ _ _ 18 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 / / PUNCT , _ _ _ _ SpaceAfter=No 30 Rel Rel NOUN NN Number=Sing _ _ _ _ 31 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 8974 # text = These included both p50/p50 and p50/p65 dimers, recognized by specific antibodies in EMSA. 1 These these PRON DT Number=Plur|PronType=Dem _ _ _ _ 2 included include VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 both both CCONJ CC _ _ _ _ _ 4 p50/p50 p50/p50 NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 p65 p65 NOUN NN Number=Sing _ _ _ _ 9 dimers dimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 recognized recognize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 EMSA EMSA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 8975 # text = The induced complexes were detectable in extracts of cells incubated with anti-class I monoclonal antibody (mAb) for 1.5 h; the induction was maximal at 5 h, persistent at 16 h and no longer observed at 40 h. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 induced induced ADJ JJ Degree=Pos _ _ _ _ 3 complexes complexe NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 extracts extract NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 incubated incubate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 anti-class anti-class NOUN NN Number=Sing _ _ _ _ 13 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 14 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 15 antibody antibody NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 mAb mAb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 1.5 1.5 NUM CD NumType=Card _ _ _ _ 21 h h INTJ UH _ _ _ _ SpaceAfter=No 22 ; ; PUNCT , _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 induction induction NOUN NN Number=Sing _ _ _ _ 25 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 26 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 27 at at ADP IN _ _ _ _ _ 28 5 5 NUM CD NumType=Card _ _ _ _ 29 h h ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 persistent persistent ADJ JJ Degree=Pos _ _ _ _ 32 at at ADP IN _ _ _ _ _ 33 16 16 NUM CD NumType=Card _ _ _ _ 34 h h NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 no no ADV RB _ _ _ _ _ 37 longer longer ADV RBR Degree=Cmp _ _ _ _ 38 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 at at ADP IN _ _ _ _ _ 40 40 40 NUM CD NumType=Card _ _ _ _ 41 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 8976 # text = The mAb failed to induce NF-kappa B/Rel nuclear activity in cells incubated in the presence of 3,4-dichloroisocoumarin, an inhibitor of I kappa B-alpha degradation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mAb mAb PROPN NNP Number=Sing _ _ _ _ 3 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 induce induce VERB VB VerbForm=Inf _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 Rel Rel PROPN NNP Number=Sing _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 incubated incubate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 presence presence NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 3,4 3,4 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 -dichloroisocoumarin -dichloroisocoumarin NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B- B- SYM NFP _ _ _ _ SpaceAfter=No 30 alpha alpha NOUN NN Number=Sing _ _ _ _ 31 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 8977 # text = Together, these results suggest that class I triggering can induce the activity of NF-kappa 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 class class NOUN NN Number=Sing _ _ _ _ 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 triggering triggere VERB VBG VerbForm=Ger _ _ _ _ 10 can can AUX MD VerbForm=Fin _ _ _ _ 11 induce induce VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ # sent_id = 8978 # text = B/Rel nuclear activity in peripheral blood T lymphocytes, thereby modulating the expression of genes regulated by these transcription factors. 1 B benefit PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 / / PUNCT , _ _ _ _ SpaceAfter=No 3 Rel Rel PROPN NNP Number=Sing _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 8 blood blood NOUN NN Number=Sing _ _ _ _ 9 T t NOUN NN Number=Sing _ _ _ _ 10 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 thereby thereby ADV RB _ _ _ _ _ 13 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8979 # text = Document 0030011650 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011650 0030011650 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8980 # text = IL-12-induced activation of NK and T cells occurs in the absence of immediate-early activation gene expression. 1 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NK NK PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 occurs occur NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 absence absence NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 early early ADJ JJ Degree=Pos _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8981 # text = The responses of lymphocytes to IL-2 and IL-12, involving proliferation, differentiation, and cytokine production, are only partially overlapping, and may depend on induced differential expression of specific sets of genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 responses response NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 involving involve VERB VBG VerbForm=Ger _ _ _ _ 15 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 21 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 only only ADV RB _ _ _ _ _ 25 partially partially ADV RB _ _ _ _ _ 26 overlapping overlapping ADV RB _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 may may AUX MD VerbForm=Fin _ _ _ _ 30 depend depend VERB VB VerbForm=Inf _ _ _ _ 31 on on ADP IN _ _ _ _ _ 32 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 differential differential ADJ JJ Degree=Pos _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 specific specific ADJ JJ Degree=Pos _ _ _ _ 37 sets set NOUN NNS Number=Plur _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 8982 # text = Using reverse-transcription PCR differential display, we isolated an mRNA species expressed in IL-2- but not IL-12-stimulated NK cells. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 reverse reverse NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 PCR Pcr ADP IN _ _ _ _ _ 6 differential differential ADJ JJ Degree=Pos _ _ _ _ 7 display display NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 10 isolated isolate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 mRNA mRNa ADJ JJ Degree=Pos _ _ _ _ 13 species species NOUN NNS Number=Plur _ _ _ _ 14 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 NK Nk PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 8983 # text = This was identified as the mRNA encoding the transcription factor egr-1, which is expressed with fast kinetics in T and NK cells upon IL-2, but not IL-12, stimulation. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 as as ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 7 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 egr egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 fast fast ADJ JJ Degree=Pos _ _ _ _ 19 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 T T PROPN NNP Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 NK NK PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 upon upon ADP IN _ _ _ _ _ 26 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 but but CCONJ CC _ _ _ _ _ 31 not not ADV RB _ _ _ _ _ 32 IL Il ADV RB _ _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 8984 # text = Analysis of the accumulation of mRNA-encoding members of the AP-1 transcription factor family demonstrated that c-fos and junB are also expressed upon stimulation of NK and T cells with IL-2, but not IL-12, whereas expression of c-jun and junD is not modified by either cytokine. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 9 members member NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 family family NOUN NN Number=Sing _ _ _ _ 18 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 c- c- SYM NFP _ _ _ _ SpaceAfter=No 21 fos fo NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 junB junb PROPN NNP Number=Sing _ _ _ _ 24 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 also also ADV RB _ _ _ _ _ 26 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 upon upon ADP IN _ _ _ _ _ 28 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 NK NK PROPN NNP Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 T t PROPN NNP Number=Sing _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 but but CCONJ CC _ _ _ _ _ 40 not not ADV RB _ _ _ _ _ 41 IL Il SYM $ _ _ _ _ SpaceAfter=No 42 - - SYM SYM _ _ _ _ SpaceAfter=No 43 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 whereas whereas SCONJ IN _ _ _ _ _ 46 expression expression NOUN NN Number=Sing _ _ _ _ 47 of of ADP IN _ _ _ _ _ 48 c- c- SYM NFP _ _ _ _ SpaceAfter=No 49 jun jun NOUN NN Number=Sing _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 junD jund NOUN NN Number=Sing _ _ _ _ 52 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 53 not not PART RB _ _ _ _ _ 54 modified modify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 55 by by ADP IN _ _ _ _ _ 56 either either DET DT _ _ _ _ _ 57 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 8985 # text = Accordingly, increased AP-1 DNA-binding activity and AP-1-dependent transcriptional activity were detected exclusively in IL-2-stimulated cells. 1 Accordingly accordingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 exclusively exclusively ADV RB _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 8986 # text = Analysis of the expression of genes reported to regulate cytokine-induced proliferation demonstrated that both IL-2 and IL-12 induce c-myc mRNA accumulation in NK and T cells, whereas only IL-2 induces bcl-2 expression. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 genes gene NOUN NNS Number=Plur _ _ _ _ 7 reported report VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 10 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 14 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 both both DET DT _ _ _ _ _ 17 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 12 12 NUM CD NumType=Card _ _ _ _ 24 induce induce NOUN NN Number=Sing _ _ _ _ 25 c-myc c-myc NOUN NN Number=Sing _ _ _ _ 26 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 27 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 NK NK PROPN NNP Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 T T PROPN NNP Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 whereas whereas SCONJ IN _ _ _ _ _ 35 only only ADV RB _ _ _ _ _ 36 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 2 2 NUM CD NumType=Card _ _ _ _ 39 induces induce NOUN NNS Number=Plur _ _ _ _ 40 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 2 2 NUM CD NumType=Card _ _ _ _ 43 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 8987 # text = Our data provide the first demonstration that IL-12-mediated activation of T and NK cells does not involve expression of members of the immediate-early activation genes family (egr-1, c-fos, and junB), AP-1 transcriptional activity, or bcl-2 expression. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 provide provide VERB VB VerbForm=Inf _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 6 demonstration demonstration NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 T T PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 NK NK PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 involve involve VERB VB VerbForm=Inf _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 members member NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 early early ADJ JJ Degree=Pos _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ _ 31 genes gene NOUN NNS Number=Plur _ _ _ _ 32 family family NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 egr egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 c- c- SYM SYM _ _ _ _ SpaceAfter=No 38 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 junB junb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT , _ _ _ _ SpaceAfter=No 46 1 1 NUM CD NumType=Card _ _ _ _ 47 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 48 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 or or CCONJ CC _ _ _ _ _ 51 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 2 2 NUM CD NumType=Card _ _ _ _ 54 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 8988 # text = This indicates that functional differences observed in IL-2- and IL-12-stimulated cells may depend, at least in part, on differential gene regulation. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 indicates indicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 functional functional ADJ JJ Degree=Pos _ _ _ _ 5 differences difference NOUN NNS Number=Plur _ _ _ _ 6 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 may may AUX MD VerbForm=Fin _ _ _ _ 20 depend depend VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 at at ADV RB _ _ _ _ _ 23 least least ADV RBS Degree=Sup _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 part part NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 on on ADP IN _ _ _ _ _ 28 differential differential ADJ JJ Degree=Pos _ _ _ _ 29 gene gene NOUN NN Number=Sing _ _ _ _ 30 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8989 # text = Document 0030011652 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011652 0030011652 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8990 # text = Regulation of gene expression at early stages of B-cell and T-cell differentiation. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 at at ADP IN _ _ _ _ _ 6 early early ADJ JJ Degree=Pos _ _ _ _ 7 stages stage NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8991 # text = The expression of distinct sets of genes at different stages of B-lymphocyte and T-lymphocyte differentiation is controlled at the level of transcription. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 5 sets set NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 genes gene NOUN NNS Number=Plur _ _ _ _ 8 at at ADP IN _ _ _ _ _ 9 different different ADJ JJ Degree=Pos _ _ _ _ 10 stages stage NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 18 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 at at ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 level level NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 8992 # text = A number of recent studies have described interactions between transcription factors in lymphocytes that provide new insights into mechanisms regulating gene expression. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 number number NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 recent recent ADJ JJ Degree=Pos _ _ _ _ 5 studies study NOUN NNS Number=Plur _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 interactions interaction NOUN NNS Number=Plur _ _ _ _ 9 between between ADP IN _ _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 new new ADJ JJ Degree=Pos _ _ _ _ 17 insights insight NOUN NNS Number=Plur _ _ _ _ 18 into into ADP IN _ _ _ _ _ 19 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 20 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 21 gene gene ADJ JJ Degree=Pos _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 8993 # text = These mechanisms include the assembly of higher order nucleoprotein complexes and other protein-protein interactions that enhance the functional specificity of transcriptional regulators in lymphocytes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 3 include include VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 assembly assembly NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 higher higher ADJ JJR Degree=Cmp _ _ _ _ 8 order order NOUN NN Number=Sing _ _ _ _ 9 nucleoprotein nucleoprotein NOUN NN Number=Sing _ _ _ _ 10 complexes complex NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 other other ADJ JJ Degree=Pos _ _ _ _ 13 protein- protein- PUNCT , _ _ _ _ SpaceAfter=No 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 interactions interaction NOUN NNS Number=Plur _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 enhance enhance VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 functional functional ADJ JJ Degree=Pos _ _ _ _ 20 specificity specificity NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 23 regulators regulator NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 8994 # text = Document 0030011659 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011659 0030011659 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 8995 # text = Oleic acid inhibits endothelial activation : 1 Oleic Oleic ADJ JJ Degree=Pos _ _ _ _ 2 acid acid ADJ JJ Degree=Pos _ _ _ _ 3 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 4 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 : : PUNCT : _ _ _ _ _ # sent_id = 8996 # text = A direct vascular antiatherogenic mechanism of a nutritional component in the mediterranean diet. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 direct direct ADJ JJ Degree=Pos _ _ _ _ 3 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 4 antiatherogenic antiatherogenic ADJ JJ Degree=Pos _ _ _ _ 5 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 nutritional nutritional ADJ JJ Degree=Pos _ _ _ _ 9 component component NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 mediterranean mediterranean ADJ JJ Degree=Pos _ _ _ _ 13 diet diet NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 8997 # text = Because oleic acid is implicated in the antiatherogenic effects attributed to the Mediterranean diet, we investigated whether this fatty acid can modulate endothelial activation, ie, the concerted expression of gene products involved in leukocyte recruitment and early atherogenesis. 1 Because because SCONJ IN _ _ _ _ _ 2 oleic oleic ADJ JJ Degree=Pos _ _ _ _ 3 acid acid NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 antiatherogenic antiatherogenic ADJ JJ Degree=Pos _ _ _ _ 9 effects effect NOUN NNS Number=Plur _ _ _ _ 10 attributed attribute VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 Mediterranean Mediterranean PROPN NNP Number=Sing _ _ _ _ 14 diet diet NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 17 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 whether whether SCONJ IN _ _ _ _ _ 19 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 20 fatty fatty NOUN NN Number=Sing _ _ _ _ 21 acid acid NOUN NN Number=Sing _ _ _ _ 22 can can AUX MD VerbForm=Fin _ _ _ _ 23 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 24 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 ie ie X FW _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 concerted concerted ADJ JJ Degree=Pos _ _ _ _ 31 expression expression NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 gene gene ADJ JJ Degree=Pos _ _ _ _ 34 products product NOUN NNS Number=Plur _ _ _ _ 35 involved involved VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 38 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 early early ADJ JJ Degree=Pos _ _ _ _ 41 atherogenesis atherogenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 8998 # text = We incubated sodium oleate with human umbilical vein endothelial cells for 0 to 72 hours, followed by coincubation of oleate with human recombinant tumor necrosis factor, interleukin (IL)-1alpha, IL-1beta, IL-4, Escherichia coli lipopolysaccharide (LPS), or phorbol 12-myristate 13-acetate for a further 6 to 24 hours. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 incubated incubate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 sodium sodium NOUN NN Number=Sing _ _ _ _ 4 oleate oleate ADJ JJ Degree=Pos _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 8 vein vein NOUN NN Number=Sing _ _ _ _ 9 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 0 0 NUM CD NumType=Card _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 72 72 NUM CD NumType=Card _ _ _ _ 15 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 coincubation coincubation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 oleate oleate NOUN NN Number=Sing _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 recombinant recombinant NOUN NN Number=Sing _ _ _ _ 25 tumor tumor NOUN NN Number=Sing _ _ _ _ 26 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 Escherichia Escherichia PROPN NNP Number=Sing _ _ _ _ 46 coli coli NOUN NN Number=Sing _ _ _ _ 47 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 LPS Lp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 51 , , PUNCT , _ _ _ _ _ 52 or or CCONJ CC _ _ _ _ _ 53 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 54 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 55 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 56 myristate myristate NOUN NN Number=Sing _ _ _ _ 57 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 58 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 59 acetate acetate NOUN NN Number=Sing _ _ _ _ 60 for for ADP IN _ _ _ _ _ 61 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 62 further further ADJ JJ Degree=Pos _ _ _ _ 63 6 6 NUM CD NumType=Card _ _ _ _ 64 to to ADP IN _ _ _ _ _ 65 24 24 NUM CD NumType=Card _ _ _ _ 66 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 67 . . PUNCT . _ _ _ _ _ # sent_id = 8999 # text = The endothelial expression of vascular cell adhesion molecule-1 (VCAM-1), E-selectin, and intercellular adhesion molecule-1 was monitored by cell surface enzyme immunoassays or flow cytometry, and steady-state levels of VCAM-1 mRNA were assessed by Northern blot analysis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 8 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT : _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 E- E- PUNCT : _ _ _ _ SpaceAfter=No 18 selectin selectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 intercellular intercellular ADJ JJ Degree=Pos _ _ _ _ 22 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 23 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 monitored monitor VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 surface surface NOUN NN Number=Sing _ _ _ _ 31 enzyme enzyme NOUN NN Number=Sing _ _ _ _ 32 immunoassays immunoassay NOUN NNS Number=Plur _ _ _ _ 33 or or CCONJ CC _ _ _ _ _ 34 flow flow NOUN NN Number=Sing _ _ _ _ 35 cytometry cytometry NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 steady steady ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 state state NOUN NN Number=Sing _ _ _ _ 41 levels level NOUN NNS Number=Plur _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 VCAM VCAM NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT , _ _ _ _ SpaceAfter=No 45 1 1 NUM CD NumType=Card _ _ _ _ 46 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 47 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 48 assessed assess VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 49 by by ADP IN _ _ _ _ _ 50 Northern northern ADJ JJ Degree=Pos _ _ _ _ 51 blot blot NOUN NN Number=Sing _ _ _ _ 52 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 9000 # text = At 10 to 100 micromol/L for >24 hours, oleate inhibited the expression of all adhesion molecules tested. 1 At at ADP IN _ _ _ _ _ 2 10 10 NUM CD NumType=Card _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 100 100 NUM CD NumType=Card _ _ _ _ 5 micromol/L micromol/l NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 > > SYM NFP _ _ _ _ SpaceAfter=No 8 24 24 NUM CD NumType=Card _ _ _ _ 9 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 oleate oleate ADJ JJ Degree=Pos _ _ _ _ 12 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 all all DET DT _ _ _ _ _ 17 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 18 molecules molecule NOUN NNS Number=Plur _ _ _ _ 19 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 9001 # text = After a 72-hour incubation with oleate and a further 16-hour incubation with oleate plus 1 microg/mL LPS, VCAM-1 expression was reduced by >40% compared with control. 1 After after ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 72 72 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 hour hour NOUN NN Number=Sing _ _ _ _ 6 incubation incubation NOUN NN Number=Sing _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 oleate oleate NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 further further ADJ JJ Degree=Pos _ _ _ _ 12 16 16 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 hour hour NOUN NN Number=Sing _ _ _ _ 15 incubation incubation NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 oleate oleate NOUN NN Number=Sing _ _ _ _ 18 plus plus CCONJ CC _ _ _ _ _ 19 1 1 NUM CD NumType=Card _ _ _ _ 20 microg microg NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 mL mL PROPN NNP Number=Sing _ _ _ _ 23 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 > > SYM $ _ _ _ _ SpaceAfter=No 33 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 % % SYM NN Number=Sing _ _ _ _ 35 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 control control NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 9002 # text = Adhesion of monocytoid U937 cells to LPS-treated endothelial cells was reduced concomitantly. 1 Adhesion Adhesion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 monocytoid monocytoid ADJ JJ Degree=Pos _ _ _ _ 4 U937 U937 NUM CD NumType=Card _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 concomitantly concomitantly ADV RB _ _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 9003 # text = Oleate also produced a quantitatively similar reduction of VCAM-1 mRNA levels on Northern blot analysis and inhibited nuclear factor-kappaB activation on electrophoretic mobility shift assays. 1 Oleate Oleate PROPN NNP Number=Sing _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 produced produce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 quantitatively quantitatively ADV RB _ _ _ _ _ 6 similar similar ADJ JJ Degree=Pos _ _ _ _ 7 reduction reduction NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 13 levels level NOUN NNS Number=Plur _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 16 blot blot NOUN NN Number=Sing _ _ _ _ 17 analysis analysis NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappaB kappab NOUN NN Number=Sing _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 27 mobility mobility NOUN NN Number=Sing _ _ _ _ 28 shift shift NOUN NN Number=Sing _ _ _ _ 29 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 9004 # text = Incubation of endothelial cells with oleate for 72 hours decreased the relative proportions of saturated (palmitic and stearic) acids in total cell lipids and increased the proportions of oleate in total cell lipids without significantly changing the relative proportions of polyunsaturated fatty acids. 1 Incubation incubation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 oleate oleate NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 72 72 NUM CD NumType=Card _ _ _ _ 9 hours hour NOUN NNS Number=Plur _ _ _ _ 10 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 relative relative ADJ JJ Degree=Pos _ _ _ _ 13 proportions proportion NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 saturated saturate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 palmitic palmitic ADJ JJ Degree=Pos _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 stearic stearic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 acids acid NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 total total ADJ JJ Degree=Pos _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 lipids lipid NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 proportions proportion NOUN NNS Number=Plur _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 oleate oleate NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 total total ADJ JJ Degree=Pos _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 lipids lipid NOUN NNS Number=Plur _ _ _ _ 36 without without SCONJ IN _ _ _ _ _ 37 significantly significantly ADV RB _ _ _ _ _ 38 changing change VERB VBG VerbForm=Ger _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 relative relative ADJ JJ Degree=Pos _ _ _ _ 41 proportions proportion NOUN NNS Number=Plur _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 polyunsaturated polyunsaturate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 fatty fatty NOUN NN Number=Sing _ _ _ _ 45 acids acid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 9005 # text = Although less potent than polyunsaturated fatty acids in inhibiting endothelial activation, oleic acid may contribute to the prevention of atherogenesis through selective displacement of saturated fatty acids in cell membrane phospholipids and a consequent modulation of gene expression for molecules involved in monocyte recruitment. 1 Although although SCONJ IN _ _ _ _ _ 2 less less ADJ JJS Degree=Sup _ _ _ _ 3 potent potent NOUN NN Number=Sing _ _ _ _ 4 than than ADP IN _ _ _ _ _ 5 polyunsaturated polyunsaturate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 fatty fatty NOUN NN Number=Sing _ _ _ _ 7 acids acid NOUN NNS Number=Plur _ _ _ _ 8 in in SCONJ IN _ _ _ _ _ 9 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 10 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 oleic oleic ADJ JJ Degree=Pos _ _ _ _ 14 acid acid NOUN NN Number=Sing _ _ _ _ 15 may may AUX MD VerbForm=Fin _ _ _ _ 16 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 prevention prevention NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 atherogenesis atherogenesis PRON DT Number=Sing|PronType=Dem _ _ _ _ 22 through through ADP IN _ _ _ _ _ 23 selective selective ADJ JJ Degree=Pos _ _ _ _ 24 displacement displacement NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 saturated saturate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 fatty fatty NOUN NN Number=Sing _ _ _ _ 28 acids acid NOUN NNS Number=Plur _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 membrane membrane NOUN NN Number=Sing _ _ _ _ 32 phospholipids phospholipid NOUN NNS Number=Plur _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 consequent consequent ADJ JJ Degree=Pos _ _ _ _ 36 modulation modulation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 gene gene NOUN NN Number=Sing _ _ _ _ 39 expression expression NOUN NN Number=Sing _ _ _ _ 40 for for ADP IN _ _ _ _ _ 41 molecules molecule NOUN NNS Number=Plur _ _ _ _ 42 involved involved VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 45 recruitment recruitment NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9006 # text = Document 0030011660 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011660 0030011660 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9007 # text = Transcriptional activation of human zeta 2 globin promoter by the alpha globin regulatory element (HS-40): functional role of specific nuclear factor-DNA complexes. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 zeta zeta NOUN NN Number=Sing _ _ _ _ 6 2 2 NUM CD NumType=Card _ _ _ _ 7 globin globin NOUN NN Number=Sing _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 globin globin ADP IN _ _ _ _ _ 13 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 14 element element NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 HS HS NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 : : PUNCT : _ _ _ _ _ 21 functional functional ADJ JJ Degree=Pos _ _ _ _ 22 role role NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 DNA dna NOUN NN Number=Sing _ _ _ _ 29 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9008 # text = We studied the functional interaction between human embryonic zeta 2 globin promoter and the alpha globin regulatory element (HS-40) located 40 kb upstream of the zeta 2 globin gene. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 functional functional ADJ JJ Degree=Pos _ _ _ _ 5 interaction interaction NOUN NN Number=Sing _ _ _ _ 6 between between ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 embryonic embryonic ADJ JJ Degree=Pos _ _ _ _ 9 zeta zeta NOUN NN Number=Sing _ _ _ _ 10 2 2 NUM CD NumType=Card _ _ _ _ 11 globin globin NOUN NN Number=Sing _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 alpha alpha NOUN NN Number=Sing _ _ _ _ 16 globin globin ADP IN _ _ _ _ _ 17 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 18 element element NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 HS HS NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 40 40 NUM CD NumType=Card _ _ _ _ 26 kb kb NOUN NN Number=Sing _ _ _ _ 27 upstream upstream NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 zeta zeta NOUN NN Number=Sing _ _ _ _ 31 2 2 NUM CD NumType=Card _ _ _ _ 32 globin globin NOUN NN Number=Sing _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 9009 # text = It was shown by transient expression assay that HS-40 behaved as an authentic enhancer for high-level zeta 2 globin promoter activity in K562 cells, an erythroid cell line of embryonic and/or fetal origin. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 transient transient ADJ JJ Degree=Pos _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 assay assay NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 HS HS VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 10 - - SYM SYM _ _ _ _ SpaceAfter=No 11 40 40 NUM CD NumType=Card _ _ _ _ 12 behaved behave VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 authentic authentic ADJ JJ Degree=Pos _ _ _ _ 16 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 level level NOUN NN Number=Sing _ _ _ _ 21 zeta zeta NOUN NN Number=Sing _ _ _ _ 22 2 2 NUM CD NumType=Card _ _ _ _ 23 globin globin NOUN NN Number=Sing _ _ _ _ 24 promoter promoter NOUN NN Number=Sing _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 K562 K562 NUM CD NumType=Card _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 line line NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 embryonic embryonic NOUN NN Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ SpaceAfter=No 37 / / PUNCT , _ _ _ _ SpaceAfter=No 38 or or CCONJ CC _ _ _ _ _ 39 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 40 origin origin NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 9010 # text = Although sequences located between -559 and -88 of the zeta 2 globin gene were dispensable for its expression on enhancerless plasmids, they were required for the HS-40 enhancer-mediated activity of the zeta 2 globin promoter. 1 Although although SCONJ IN _ _ _ _ _ 2 sequences sequence NOUN NNS Number=Plur _ _ _ _ 3 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 between between ADP IN _ _ _ _ _ 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 559 559 NUM CD NumType=Card _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 - - SYM SYM _ _ _ _ SpaceAfter=No 9 88 88 NUM CD NumType=Card _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 zeta zeta NOUN NN Number=Sing _ _ _ _ 13 2 2 NUM CD NumType=Card _ _ _ _ 14 globin globin NOUN NN Number=Sing _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 dispensable dispensable ADJ JJ Degree=Pos _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 on on ADP IN _ _ _ _ _ 22 enhancerless enhancerless ADJ JJ Degree=Pos _ _ _ _ 23 plasmids plasmid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 26 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 HS HS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 40 40 NUM CD NumType=Card _ _ _ _ 33 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 activity activity NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 zeta zeta NOUN NN Number=Sing _ _ _ _ 40 2 2 NUM CD NumType=Card _ _ _ _ 41 globin globin NOUN NN Number=Sing _ _ _ _ 42 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 9011 # text = Site-directed mutagenesis demonstrated that this HS-40 enhancer-zeta 2 globin promoter interaction is mediated by the two GATA-1 factor binding motifs located at -230 and -104, respectively. 1 Site site PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 directed direct VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 mutagenesis mutagenesis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 5 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 HS HS NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 40 40 NUM CD NumType=Card _ _ _ _ 11 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 -zeta -zeta NOUN NN Number=Sing _ _ _ _ 13 2 2 NUM CD NumType=Card _ _ _ _ 14 globin globin NOUN NN Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 interaction interaction NOUN NN Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 two two NUM CD NumType=Card _ _ _ _ 22 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 binding bind VERB VBG VerbForm=Ger _ _ _ _ 27 motifs motif NOUN NNS Number=Plur _ _ _ _ 28 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 at at ADP IN _ _ _ _ _ 30 - - SYM SYM _ _ _ _ SpaceAfter=No 31 230 230 NUM CD NumType=Card _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 - - SYM SYM _ _ _ _ SpaceAfter=No 34 104 104 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 9012 # text = The functional domains of HS-40 were also mapped. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 functional functional ADJ JJ Degree=Pos _ _ _ _ 3 domains domains NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 HS HS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 40 40 NUM CD NumType=Card _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 also also ADV RB _ _ _ _ _ 10 mapped map VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 9013 # text = Bal 31 deletion mapping data suggested that one GATA-1 motif, one GT motif, and two NF-E2/AP1 motifs together formed the functional core of HS-40 in the erythroid-specific activation of the zeta 2 globin promoter. 1 Bal bal PROPN NNP Number=Sing _ _ _ _ 2 31 31 NUM CD NumType=Card _ _ _ _ 3 deletion deletion NOUN NN Number=Sing _ _ _ _ 4 mapping mapping NOUN NN Number=Sing _ _ _ _ 5 data data NOUN NN Number=Sing _ _ _ _ 6 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 one one NUM CD NumType=Card _ _ _ _ 9 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 one one NUM CD NumType=Card _ _ _ _ 15 GT Gt NOUN NN Number=Sing _ _ _ _ 16 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 two two NUM CD NumType=Card _ _ _ _ 20 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - SYM SYM _ _ _ _ SpaceAfter=No 22 E2 E2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 / / SYM SYM _ _ _ _ SpaceAfter=No 24 AP1 AP1 NUM CD NumType=Card _ _ _ _ 25 motifs motif NOUN NNS Number=Plur _ _ _ _ 26 together together ADV RB _ _ _ _ _ 27 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 functional functional ADJ JJ Degree=Pos _ _ _ _ 30 core core NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 HS HS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 40 40 NUM CD NumType=Card _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 specific specific ADJ JJ Degree=Pos _ _ _ _ 40 activation activation NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 zeta zeta NOUN NN Number=Sing _ _ _ _ 44 2 2 NUM CD NumType=Card _ _ _ _ 45 globin globin NOUN NN Number=Sing _ _ _ _ 46 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 9014 # text = Site-directed mutagenesis further demonstrated that the enhancer function of one of the two NF-E2/AP1 motifs of HS-40 is mediated through its binding to NF-E2 but not AP1 transcription factor. 1 Site site PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 directed direct VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 mutagenesis mutagenesis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 5 further further ADV RB _ _ _ _ _ 6 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 10 function function NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 one one NUM CD NumType=Card _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 two two NUM CD NumType=Card _ _ _ _ 16 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - SYM SYM _ _ _ _ SpaceAfter=No 18 E2/ E2/ SYM SYM _ _ _ _ SpaceAfter=No 19 AP1 AP1 NUM CD NumType=Card _ _ _ _ 20 motifs motif NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 HS HS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 40 40 NUM CD NumType=Card _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 through through ADP IN _ _ _ _ _ 28 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 29 binding bind VERB VBG VerbForm=Ger _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 E2 e2 NOUN NN Number=Sing _ _ _ _ 34 but but CCONJ CC _ _ _ _ _ 35 not not PART RB _ _ _ _ _ 36 AP1 AP1 NUM CD NumType=Card _ _ _ _ 37 transcription transcription NOUN NN Number=Sing _ _ _ _ 38 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 9015 # text = Finally, we did genomic footprinting of the HS-40 enhancer region in K562 cells, adult nucleated erythroblasts, and different nonerythroid cells. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 did do VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 6 footprinting footprinting NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 HS H NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 40 40 NUM CD NumType=Card _ _ _ _ 12 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 13 region region NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 K562 K562 NUM CD NumType=Card _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 adult adult NOUN NN Number=Sing _ _ _ _ 19 nucleated nucleate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 erythroblasts erythroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 different different ADJ JJ Degree=Pos _ _ _ _ 24 nonerythroid nonerythroid ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 9016 # text = All sequence motifs within the functional core of HS-40, as mapped by transient expression analysis, appeared to bind a nuclear factor(s) in living K562 cells but not in nonerythroid cells. 1 All all DET DT _ _ _ _ _ 2 sequence sequence NOUN NN Number=Sing _ _ _ _ 3 motifs motif NOUN NNS Number=Plur _ _ _ _ 4 within within ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 functional functional ADJ JJ Degree=Pos _ _ _ _ 7 core core NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 HS HS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 as as SCONJ IN _ _ _ _ _ 14 mapped map VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 transient transient ADJ JJ Degree=Pos _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 bind bind VERB VB VerbForm=Inf _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 s s X AFX _ _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 in in SCONJ IN _ _ _ _ _ 30 living live VERB VBG VerbForm=Ger _ _ _ _ 31 K562 K562 NUM CD NumType=Card _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 but but CCONJ CC _ _ _ _ _ 34 not not PART RB _ _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 nonerythroid nonerythroid ADJ JJ Degree=Pos _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 9017 # text = On the other hand, only one of the apparently nonfunctional sequence motifs was bound with factors in vivo. 1 On on ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 hand hand NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 only only ADV RB _ _ _ _ _ 7 one one NUM CD NumType=Card _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 apparently apparently ADJ JJ Degree=Pos _ _ _ _ 11 nonfunctional nonfunctional ADJ JJ Degree=Pos _ _ _ _ 12 sequence sequence NOUN NN Number=Sing _ _ _ _ 13 motifs motif NOUN NNS Number=Plur _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 bound bound ADJ JJ Degree=Pos _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 factors factor NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 9018 # text = In comparison to K562, nucleated erythroblasts from adult human bone marrow exhibited a similar but nonidentical pattern of nuclear factor binding in vivo at the HS-40 region. 1 In in ADP IN _ _ _ _ _ 2 comparison comparison NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 K562 K562 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 nucleated nucleate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 erythroblasts erythroblast NOUN NNS Number=Plur _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 adult adult ADJ JJ Degree=Pos _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 bone bone NOUN NN Number=Sing _ _ _ _ 12 marrow marrow NOUN NN Number=Sing _ _ _ _ 13 exhibited exhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 similar similar ADJ JJ Degree=Pos _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 nonidentical nonidentical ADJ JJ Degree=Pos _ _ _ _ 18 pattern pattern NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 vivo vivo NOUN NN Number=Sing _ _ _ _ 25 at at ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 HS HS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 40 40 NUM CD NumType=Card _ _ _ _ 30 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 9019 # text = These data suggest that transcriptional activation of human embryonic zeta 2 globin gene and the fetal/adult alpha globin genes is mediated by erythroid cell-specific and developmental stage-specific nuclear factor-DNA complexes which form at the enhancer (HS-40) and the globin promoters. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 embryonic embryonic ADJ JJ Degree=Pos _ _ _ _ 10 zeta zeta NOUN NN Number=Sing _ _ _ _ 11 2 2 NUM CD NumType=Card _ _ _ _ 12 globin globin NOUN NN Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 fetal fetal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 18 adult adult NOUN NN Number=Sing _ _ _ _ 19 alpha alpha ADP IN _ _ _ _ _ 20 globin globin NOUN NN Number=Sing _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 erythroid erythroid VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 specific specific ADJ JJ Degree=Pos _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 31 stage stage NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 specific specific ADJ JJ Degree=Pos _ _ _ _ 34 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 DNA dna NOUN NN Number=Sing _ _ _ _ 38 complexes complex NOUN NNS Number=Plur _ _ _ _ 39 which which PRON WDT PronType=Rel _ _ _ _ 40 form form VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 41 at at ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 44 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 45 HS HS NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 globin globin ADJ JJ Degree=Pos _ _ _ _ 52 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9020 # text = Document 0030011668 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011668 0030011668 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9021 # text = Neuronal (type I) nitric oxide synthase regulates nuclear factor kappaB activity and immunologic (type II) nitric oxide synthase expression. 1 Neuronal Neuronal ADJ JJ Degree=Pos _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 type type NOUN NN Number=Sing _ _ _ _ 4 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 nitric nitric ADJ JJ Degree=Pos _ _ _ _ 7 oxide oxide ADJ JJ Degree=Pos _ _ _ _ 8 synthase synthase NOUN NN Number=Sing _ _ _ _ 9 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 immunologic immunologic NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 type type NOUN NN Number=Sing _ _ _ _ 18 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 nitric nitric ADJ JJ Degree=Pos _ _ _ _ 21 oxide oxide NOUN NN Number=Sing _ _ _ _ 22 synthase synthase NOUN NN Number=Sing _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9022 # text = Nitric oxide subserves diverse physiologic roles in the nervous system. 1 Nitric Nitric ADJ JJ Degree=Pos _ _ _ _ 2 oxide oxide NOUN NN Number=Sing _ _ _ _ 3 subserves subserve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 diverse diverse ADJ JJ Degree=Pos _ _ _ _ 5 physiologic physiologic NOUN NN Number=Sing _ _ _ _ 6 roles role NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 nervous nervous ADJ JJ Degree=Pos _ _ _ _ 10 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 9023 # text = NO is produced from at least three different NO synthase (NOS) isoforms: neuronal NOS (nNOS), endothelial NOS, and immunologic NOS (iNOS). 1 NO no DET DT _ _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 produced produce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 at at ADV RB _ _ _ _ _ 6 least least ADV RBS Degree=Sup _ _ _ _ 7 three three NUM CD NumType=Card _ _ _ _ 8 different different ADJ JJ Degree=Pos _ _ _ _ 9 NO no DET DT _ _ _ _ _ 10 synthase synthase NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 NOS Nos NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 isoforms isoform NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 : : PUNCT : _ _ _ _ _ 16 neuronal neuronal ADJ JJ Degree=Pos _ _ _ _ 17 NOS Nos NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 nNOS nNOS NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 23 NOS no NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 immunologic immunologic ADJ JJ Degree=Pos _ _ _ _ 27 NOS NOS PROPN NNP Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 iNOS iNOS X ADD _ _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 9024 # text = We show that nNOS is the predominant isoform constitutively expressed in glia. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 nNOS nNOS PROPN NNP Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 predominant predominant ADJ JJ Degree=Pos _ _ _ _ 8 isoform isoform NOUN NN Number=Sing _ _ _ _ 9 constitutively constitutively ADV RB _ _ _ _ _ 10 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 glia glia NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 9025 # text = NO derived from nNOS in glia inhibits the transcription factor nuclear factor kappaB (NF kappaB) as NOS inhibitors enhance basal NF kappaB activation. 1 NO no INTJ UH _ _ _ _ _ 2 derived derive VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 nNOS nNOS PROPN NNP Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 glia glia PROPN NNP Number=Sing _ _ _ _ 7 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 NF NF PROPN NNP Number=Sing _ _ _ _ 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 NOS NOS ADJ JJ Degree=Pos _ _ _ _ 20 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 21 enhance enhance VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 basal basal ADJ JJ Degree=Pos _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ _ 24 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 9026 # text = Pyrrolidine dithiocarbamate (PDTC) is an inhibitor of NF kappaB in most cells; however, we show that PDTC is also a potent scavenger of NO through formation of mononitrosyl iron complexes with PDTC. 1 Pyrrolidine Pyrrolidine NOUN NN Number=Sing _ _ _ _ 2 dithiocarbamate dithiocarbamate NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 PDTC PDTC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ _ 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 most most ADJ JJS Degree=Sup _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 ; ; PUNCT , _ _ _ _ _ 16 however however ADV RB _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 19 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 PDTC PDTC PROPN NNP Number=Sing _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 also also ADV RB _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 potent potent NOUN NN Number=Sing _ _ _ _ 26 scavenger scavenger NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 NO no DET DT _ _ _ _ _ 29 through through ADP IN _ _ _ _ _ 30 formation formation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 mononitrosyl mononitrosyl NOUN NN Number=Sing _ _ _ _ 33 iron iron NOUN NN Number=Sing _ _ _ _ 34 complexes complex NOUN NNS Number=Plur _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 PDTC PDTC NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 9027 # text = In Jurkat cells, a human T-cell lymphoma cell line, tumor necrosis factor-alpha (TNF-alpha) induces NF kappaB activation that is inhibited by PDTC. 1 In in ADP IN _ _ _ _ _ 2 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 tumor tumor NOUN NN Number=Sing _ _ _ _ 14 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 -alpha -alpha NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 induces induce NOUN NNS Number=Plur _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ _ 24 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 that that PRON WDT PronType=Rel _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 PDTC PDTC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 9028 # text = Contrary to the results in Jurkat cells, PDTC did not inhibit tumor necrosis factor-alpha-induced NF kappaB activation in astrocytes; instead PDTC itself induces NF kappaB activation in astrocytes, and this may be related to scavenging of endogenously produced NO by the PDTC iron complex. 1 Contrary contrary ADJ JJ Degree=Pos _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 PDTC PDTC PROPN NNP Number=Sing _ _ _ _ 10 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 13 tumor tumor NOUN NN Number=Sing _ _ _ _ 14 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 -alpha-induced -alpha-induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ _ 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 astrocytes astrocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 ; ; PUNCT , _ _ _ _ _ 23 instead instead ADV RB _ _ _ _ _ 24 PDTC Pdtc NOUN NN Number=Sing _ _ _ _ 25 itself itself PRON PRP Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 26 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ _ 28 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 astrocytes astrocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 35 may may AUX MD VerbForm=Fin _ _ _ _ 36 be be AUX VB VerbForm=Inf _ _ _ _ 37 related related ADJ JJ Degree=Pos _ _ _ _ 38 to to SCONJ IN _ _ _ _ _ 39 scavenging scavenging VERB VBG VerbForm=Ger _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 endogenously endogenously ADV RB _ _ _ _ _ 42 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 NO no ADV RB _ _ _ _ _ 44 by by ADP IN _ _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 PDTC PDTC PROPN NNP Number=Sing _ _ _ _ 47 iron iron ADJ JJ Degree=Pos _ _ _ _ 48 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 9029 # text = In astrocytes PDTC also dramatically induces the NF kappaB-dependent enzyme, iNOS, supporting the physiologic relevance of endogenous NO regulation of NF kappaB. 1 In in ADP IN _ _ _ _ _ 2 astrocytes astrocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 PDTC Pdtc PROPN NNP Number=Sing _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 dramatically dramatically ADV RB _ _ _ _ _ 6 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ _ 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 enzyme enzyme NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 iNOS ino VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 supporting support VERB VBG VerbForm=Ger _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 physiologic physiologic NOUN NN Number=Sing _ _ _ _ 19 relevance relevance NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 22 NO no DET DT _ _ _ _ _ 23 regulation regulation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ _ 26 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 9030 # text = NF kappaB activation in glia from mice lacking nNOS responds more rapidly to PDTC compared with astrocytes from wild-type mice. 1 NF NF PROPN NNP Number=Sing _ _ _ _ 2 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 glia glia NOUN NN Number=Sing _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 mice mouse NOUN NNS Number=Plur _ _ _ _ 8 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 9 nNOS nnos NOUN NNS Number=Plur _ _ _ _ 10 responds responds NOUN NNS Number=Plur _ _ _ _ 11 more more ADV RBR _ _ _ _ _ 12 rapidly rapidly ADV RB _ _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 PDTC PDTC PROPN NNP Number=Sing _ _ _ _ 15 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 astrocytes astrocyte NOUN NNS Number=Plur _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 type type NOUN NN Number=Sing _ _ _ _ 22 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 9031 # text = Our data suggest that nNOS in astrocytes regulates NF kappaB activity and iNOS expression, and indicate a novel regulatory role for nNOS in tonically suppressing central nervous system, NF kappaB-regulated genes. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 nNOS nnos NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 astrocytes astrocyte NOUN NNS Number=Plur _ _ _ _ 8 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ _ 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 iNOS inos VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 novel novel NOUN NN Number=Sing _ _ _ _ 20 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 21 role role NOUN NN Number=Sing _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 nNOS nnos NOUN NNS Number=Plur _ _ _ _ 24 in in SCONJ IN _ _ _ _ _ 25 tonically tonically ADV RB _ _ _ _ _ 26 suppressing suppresse VERB VBG VerbForm=Ger _ _ _ _ 27 central central ADJ JJ Degree=Pos _ _ _ _ 28 nervous nervous ADJ JJ Degree=Pos _ _ _ _ 29 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ _ 32 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9032 # text = Document 0030011669 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011669 0030011669 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9033 # text = Inhibition of HIV-1 latency reactivation by dehydroepiandrosterone (DHEA) and an analog of DHEA. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 latency latency NOUN NN Number=Sing _ _ _ _ 7 reactivation reactivation NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 dehydroepiandrosterone dehydroepiandrosterone NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 DHEA DHEA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 analog analog NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 DHEA DHEA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9034 # text = The initial infection with human immunodeficiency virus type 1 (HIV-1) in most individuals usually results in the establishment of a latent or chronic infection before eventual progression toward acquired immunodeficiency syndrome. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 initial initial ADJ JJ Degree=Pos _ _ _ _ 3 infection infection NOUN NN Number=Sing _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 7 virus virus NOUN NN Number=Sing _ _ _ _ 8 type type NOUN NN Number=Sing _ _ _ _ 9 1 1 NUM CD NumType=Card _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 X LS _ _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 most most ADJ JJS Degree=Sup _ _ _ _ 17 individuals individual NOUN NNS Number=Plur _ _ _ _ 18 usually usually ADV RB _ _ _ _ _ 19 results result NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 establishment establishment NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 latent latent ADJ JJ Degree=Pos _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 28 infection infection NOUN NN Number=Sing _ _ _ _ 29 before before ADP IN _ _ _ _ _ 30 eventual eventual ADJ JJ Degree=Pos _ _ _ _ 31 progression progression NOUN NN Number=Sing _ _ _ _ 32 toward toward ADP IN _ _ _ _ _ 33 acquired acquire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 35 syndrome syndrome NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 9035 # text = HIV-1 can also establish a latent or persistent infection in some T cell lines that show minimal constitutive virus expression. 1 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 can can AUX MD VerbForm=Fin _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 establish establish VERB VB VerbForm=Inf _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 latent latent ADJ JJ Degree=Pos _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 persistent persistent ADJ JJ Degree=Pos _ _ _ _ 11 infection infection NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 some some DET DT _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 lines line NOUN NNS Number=Plur _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 20 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 21 virus virus NOUN NN Number=Sing _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 9036 # text = However, activation of the T cell lines leading to enhanced HIV-1 replication can be induced by antigens, mitogens, and cytokines (tumor necrosis factor alpha [TNF-alpha], interleukin 1, and interleukin-2). 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 T T PROPN NNP Number=Sing _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 lines line NOUN NNS Number=Plur _ _ _ _ 9 leading lead VERB VBG VerbForm=Ger _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 replication replication NOUN NN Number=Sing _ _ _ _ 16 can can AUX MD VerbForm=Fin _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 antigens antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 mitogens mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 tumor tumor NOUN NN Number=Sing _ _ _ _ 28 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 29 factor factor NOUN NN Number=Sing _ _ _ _ 30 alpha alpha NOUN NN Number=Sing _ _ _ _ 31 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 interleukin interleukin ADV RB _ _ _ _ _ 38 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 9037 # text = Various gene products from other viruses (HTLV-1, HSV, EBV, CMV, HBV, and HHV-6) can also enhance HIV-1 long terminal repeat (LTR)-driven reporter gene activity. 1 Various various ADJ JJ Degree=Pos _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 products product NOUN NNS Number=Plur _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 other other ADJ JJ Degree=Pos _ _ _ _ 6 viruses viruse NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 HTLV HTLV NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 HSV HSV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 CMV CMV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 HBV HBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 HHV HHV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 6 6 X LS _ _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 can can AUX MD VerbForm=Fin _ _ _ _ 26 also also ADV RB _ _ _ _ _ 27 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 28 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 long long ADJ JJ Degree=Pos _ _ _ _ 32 terminal terminal NOUN NN Number=Sing _ _ _ _ 33 repeat repeat NOUN NN Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 - - PUNCT : _ _ _ _ SpaceAfter=No 38 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 reporter reporter NOUN NN Number=Sing _ _ _ _ 40 gene gene NOUN NN Number=Sing _ _ _ _ 41 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 9038 # text = On the basis of these observations, it has been proposed that reactivation of latent HIV-1 harbored in chronically infected T lymphocytes, monocytes, or macrophages plays an important role in the pathogenesis of AIDS. 1 On on ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 basis basis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 observations observation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 9 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 11 proposed propose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 13 reactivation reactivation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 latent latent ADJ JJ Degree=Pos _ _ _ _ 16 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 harbored harbor VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 chronically chronically ADV RB _ _ _ _ _ 22 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 T t NOUN NN Number=Sing _ _ _ _ 24 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 30 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 important important ADJ JJ Degree=Pos _ _ _ _ 33 role role NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 AIDS aids NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 9039 # text = So far, there are no drugs or therapy available that can provide protection against HIV-1 latency reactivation. 1 So so ADV RB _ _ _ _ _ 2 far far ADV RB Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 there there PRON EX _ _ _ _ _ 5 are be VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 no no DET DT _ _ _ _ _ 7 drugs drug NOUN NNS Number=Plur _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 therapy therapy NOUN NN Number=Sing _ _ _ _ 10 available available ADJ JJ Degree=Pos _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 can can AUX MD VerbForm=Fin _ _ _ _ 13 provide provide VERB VB VerbForm=Inf _ _ _ _ 14 protection protection NOUN NN Number=Sing _ _ _ _ 15 against against ADP IN _ _ _ _ _ 16 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 latency latency NOUN NN Number=Sing _ _ _ _ 20 reactivation reactivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 9040 # text = ACH-2, derived from a human T cell line (CEM), is chronically infected with HIV-1, with low levels of constitutive virus expression. 1 ACH ACh ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 derived derive VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 T T PROPN NNP Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 line line NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 CEM CEM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 chronically chronically ADV RB _ _ _ _ _ 18 infected infect ADJ JJ Degree=Pos _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 low low ADJ JJ Degree=Pos _ _ _ _ 26 levels level NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 29 virus virus NOUN NN Number=Sing _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 9041 # text = ACH-2 can be converted to productive infection by stimulation of the cells with 12-O-tetradecanoylphorbol-13-acetate (TPA), mitogen or cytokines (TNF-alpha), or infection with HSV. 1 ACH ACh NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 can can AUX MD VerbForm=Fin _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 converted convert VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 productive productive VERB VB VerbForm=Inf _ _ _ _ 9 infection infection NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 12-O-tetradecanoylphorbol 12-O-tetradecanoylphorbol PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 -acetate -acetate NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 mitogen mitogen NOUN NNS Number=Plur _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 or or CCONJ CC _ _ _ _ _ 33 infection infection NOUN NN Number=Sing _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 HSV HSV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 9042 # text = Therefore the ACH-2 cell line is a good candidate for studying the effects of drugs on HIV-1 activation. 1 Therefore therefore ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 ACH ACh NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 line line NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 good good ADJ JJ Degree=Pos _ _ _ _ 11 candidate candidate NOUN NN Number=Sing _ _ _ _ 12 for for SCONJ IN _ _ _ _ _ 13 studying study VERB VBG VerbForm=Ger _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 effects effect NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 drugs drug NOUN NNS Number=Plur _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 9043 # text = Previously, we have reported that DHEA and synthetic analogs of DHEA can be modest inhibitors of HIV-1 IIIB replication in phytohemagglutinin-stimulated peripheral blood lymphocyte cultures. 1 Previously previously ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 reported report VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 DHEA DHEa PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 10 analogs analog NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 DHEA DHEA PROPN NNP Number=Sing _ _ _ _ 13 can can AUX MD VerbForm=Fin _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 modest modest ADJ JJ Degree=Pos _ _ _ _ 16 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 IIIB Iiib NOUN NN Number=Sing _ _ _ _ 22 replication replication NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 phytohemagglutinin phytohemagglutinin NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 28 blood blood NOUN NN Number=Sing _ _ _ _ 29 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 30 cultures culture NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 9044 # text = (ABSTRACT TRUNCATED AT 250 WORDS) 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 ABSTRACT ABSTRACT X GW _ _ _ _ _ 3 TRUNCATED Truncate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 AT at ADV RB _ _ _ _ _ 5 250 250 NUM CD NumType=Card _ _ _ _ 6 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9045 # text = Document 0030011670 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011670 0030011670 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9046 # text = Activation of a novel gene in 3q21 and identification of intergenic fusion transcripts with ecotropic viral insertion site I in leukemia. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 novel novel NOUN NN Number=Sing _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 3q21 3q21 NUM CD NumType=Card _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 identification identification NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 intergenic intergenic ADJ JJ Degree=Pos _ _ _ _ 12 fusion fusion NOUN NN Number=Sing _ _ _ _ 13 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 ecotropic ecotropic ADJ JJ Degree=Pos _ _ _ _ 16 viral viral ADJ JJ Degree=Pos _ _ _ _ 17 insertion insertion NOUN NN Number=Sing _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ _ 19 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9047 # text = We have identified a novel gene, GR6, located within the leukemia breakpoint region of 3q21, that is normally expressed in early fetal development but not in adult peripheral blood. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 novel novel NOUN NN Number=Sing _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 GR6 Gr6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 within within ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 14 breakpoint breakpoint NOUN NN Number=Sing _ _ _ _ 15 region region NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 3q21 3q21 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 normally normally ADV RB _ _ _ _ _ 22 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 early early ADJ JJ Degree=Pos _ _ _ _ 25 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 26 development development NOUN NN Number=Sing _ _ _ _ 27 but but CCONJ CC _ _ _ _ _ 28 not not PART RB _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 adult adult ADJ JJ Degree=Pos _ _ _ _ 31 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 32 blood blood NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 9048 # text = GR6 is activated in the UCSD-AML1 cell line and in a leukemic sample, both of which carry a t(3;3)(q21;q26). 1 GR6 Gr6 PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 UCSD Ucsd NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 AML1 Aml1 NUM CD NumType=Card _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 line line NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 15 sample sample NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 both both DET DT _ _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 carry carry VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 t t NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 3;3 3;3 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 q21;q26 q21;q26 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 9049 # text = In UCSD-AML1, we have also identified fusion transcripts between the ecotropic viral insertion site I (EVI1) gene in 3q26 and GR6 and between EVI1 and Ribophorin I that maps 30 kb telomeric to GR6 in 3q21. 1 In in ADP IN _ _ _ _ _ 2 UCSD UCSD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 AML1 AML1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 also also ADV RB _ _ _ _ _ 9 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 fusion fusion NOUN NN Number=Sing _ _ _ _ 11 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 12 between between ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 ecotropic ecotropic ADJ JJ Degree=Pos _ _ _ _ 15 viral viral ADJ JJ Degree=Pos _ _ _ _ 16 insertion insertion NOUN NN Number=Sing _ _ _ _ 17 site site NOUN NN Number=Sing _ _ _ _ 18 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 EVI1 EVI1 X LS _ _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 3q26 3q26 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 GR6 GR6 PROPN NNP Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 between between ADP IN _ _ _ _ _ 29 EVI1 EVI1 PROPN NNP Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 Ribophorin Ribophorin PROPN NNP Number=Sing _ _ _ _ 32 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 33 that that PRON WDT PronType=Rel _ _ _ _ 34 maps map VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 30 30 NUM CD NumType=Card _ _ _ _ 36 kb kb NOUN NN Number=Sing _ _ _ _ 37 telomeric telomeric NOUN NN Number=Sing _ _ _ _ 38 to to ADP IN _ _ _ _ _ 39 GR6 GR6 NUM CD NumType=Card _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 3q21 3q21 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 9050 # text = All fusions splice the 5' ends of the 3q21 genes into exon 2 of the EVI1 gene, an event that is similar to the normal intergenic splicing of MDS1-EVI1 and to those previously documented in leukemias with t(3;21) and t(3;12), in which acute myelogenous leukemia 1-EVI1 fusions and ETV6-EVI1 fusions, respectively, occur. 1 All all DET DT _ _ _ _ _ 2 fusions fusion NOUN NNS Number=Plur _ _ _ _ 3 splice splice VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 ' 's PUNCT `` _ _ _ _ _ 7 ends end NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 3q21 3q21 NUM CD NumType=Card _ _ _ _ 11 genes gene NOUN NNS Number=Plur _ _ _ _ 12 into into ADP IN _ _ _ _ _ 13 exon exon NOUN NN Number=Sing _ _ _ _ 14 2 2 NUM CD NumType=Card _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 EVI1 EVI1 PROPN NNP Number=Sing _ _ _ _ 18 gene gene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 event event NOUN NN Number=Sing _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 similar similar ADJ JJ Degree=Pos _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 normal normal ADJ JJ Degree=Pos _ _ _ _ 28 intergenic intergenic ADJ JJ Degree=Pos _ _ _ _ 29 splicing splicing NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 MDS Md NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 - - SYM SYM _ _ _ _ SpaceAfter=No 34 EVI1 EVI1 NUM CD NumType=Card _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 38 previously previously ADV RB _ _ _ _ _ 39 documented document VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 leukemias leukemias NOUN NNS Number=Plur _ _ _ _ 42 with with ADP IN _ _ _ _ _ 43 t( t( SYM NFP _ _ _ _ SpaceAfter=No 44 3;21 3;21 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 t t NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 3;12 3;12 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 51 , , PUNCT , _ _ _ _ _ 52 in in ADP IN _ _ _ _ _ 53 which which PRON WDT PronType=Rel _ _ _ _ 54 acute acute ADJ JJ Degree=Pos _ _ _ _ 55 myelogenous myelogenous ADJ JJ Degree=Pos _ _ _ _ 56 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 57 1- 1- SYM SYM _ _ _ _ SpaceAfter=No 58 EVI1 Evi1 NUM CD NumType=Card _ _ _ _ 59 fusions fusion NOUN NNS Number=Plur _ _ _ _ 60 and and CCONJ CC _ _ _ _ _ 61 ETV6 ETV6 NUM CD NumType=Card _ _ _ SpaceAfter=No 62 -EVI1 -evi1 NOUN NN Number=Sing _ _ _ _ 63 fusions fusion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 64 , , PUNCT , _ _ _ _ _ 65 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 66 , , PUNCT , _ _ _ _ _ 67 occur occur NOUN NN Number=Sing _ _ _ SpaceAfter=No 68 . . PUNCT . _ _ _ _ _ # sent_id = 9051 # text = The Ribophorin I-EVI1 fusion in particular may be a common occurrence in t(3;3). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Ribophorin Ribophorin PROPN NNP Number=Sing _ _ _ _ 3 I I PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 EVI1 EVI1 PROPN NNP Number=Sing _ _ _ _ 6 fusion fusion NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 particular particular ADJ JJ Degree=Pos _ _ _ _ 9 may may AUX MD VerbForm=Fin _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 common common ADJ JJ Degree=Pos _ _ _ _ 13 occurrence occurrence NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 t t NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ; ; PUNCT , _ _ _ _ SpaceAfter=No 19 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9052 # text = Document 0030011677 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011677 0030011677 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9053 # text = Immortalization of CD4(+) and CD8(+) 1 Immortalization Immortalization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 + + SYM SYM _ _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 CD8 CD8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 (+) (+) SYM NFP _ _ _ _ _ # sent_id = 9054 # text = T lymphocytes by human T-cell leukemia virus type 1 Tax mutants expressed in a functional molecular clone. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 8 virus virus NOUN NN Number=Sing _ _ _ _ 9 type type NOUN NN Number=Sing _ _ _ _ 10 1 1 NUM CD NumType=Card _ _ _ _ 11 Tax tax NOUN NN Number=Sing _ _ _ _ 12 mutants mutant NOUN NNS Number=Plur _ _ _ _ 13 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 functional functional ADJ JJ Degree=Pos _ _ _ _ 17 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 18 clone clone NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9055 # text = The human T-cell leukemia virus type 1 (HTLV-1) transcriptional trans-activator Tax has been demonstrated to have transforming activity in multiple cell culture and transgenic-mouse models. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 type type NOUN NN Number=Sing _ _ _ _ 8 1 1 NUM CD NumType=Card _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 HTLV HTLV NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 X LS _ _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 15 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 activator activator NOUN NN Number=Sing _ _ _ _ 18 Tax tax NOUN NN Number=Sing _ _ _ _ 19 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 21 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 have have VERB VB VerbForm=Inf _ _ _ _ 24 transforming transform VERB VBG VerbForm=Ger _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 culture culture NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 transgenic transgenic NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 mouse mouse NOUN NN Number=Sing _ _ _ _ 34 models model NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 9056 # text = In addition to activating transcription from the viral long terminal repeat (LTR) through the cyclic AMP response element binding protein/activating transcription factor (CREB/ATF) family of transcription factors, Tax activates the expression of multiple cellular promoters through the NF-kappaB pathway of transcriptional activation. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 to to SCONJ IN _ _ _ _ _ 4 activating activate VERB VBG VerbForm=Ger _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 viral viral ADJ JJ Degree=Pos _ _ _ _ 9 long long ADJ JJ Degree=Pos _ _ _ _ 10 terminal terminal NOUN NN Number=Sing _ _ _ _ 11 repeat repeat NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 through through ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 cyclic cyclic ADJ JJ Degree=Pos _ _ _ _ 18 AMP Amp NOUN NN Number=Sing _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ _ 20 element element NOUN NN Number=Sing _ _ _ _ 21 binding bind VERB VBG VerbForm=Ger _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 / / PUNCT , _ _ _ _ SpaceAfter=No 24 activating activat VERB VBG VerbForm=Ger _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 / / PUNCT , _ _ _ _ SpaceAfter=No 30 ATF ATF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 family family NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ _ 35 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 Tax Tax PROPN NNP Number=Sing _ _ _ _ 38 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 expression expression NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 43 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 44 promoters promoter NOUN NNS Number=Plur _ _ _ _ 45 through through ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 50 pathway pathway NOUN NN Number=Sing _ _ _ _ 51 of of ADP IN _ _ _ _ _ 52 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 53 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 9057 # text = The Tax mutants M22 and M47 have previously been demonstrated to selectively abrogate the ability of Tax to activate transcription through the NF-kappaB or CREB/ATF pathway, respectively. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Tax tax NOUN NN Number=Sing _ _ _ _ 3 mutants mutant NOUN NNS Number=Plur _ _ _ _ 4 M22 M22 NUM CD NumType=Card _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 M47 M47 NOUN NN Number=Sing _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 previously previously ADV RB _ _ _ _ _ 9 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 10 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 selectively selectively ADV RB _ _ _ _ _ 13 abrogate abrogate VERB VB VerbForm=Inf _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 ability ability NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 Tax tax NOUN NN Number=Sing _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 activate activate VERB VB VerbForm=Inf _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 through through ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 / / PUNCT , _ _ _ _ SpaceAfter=No 29 ATF ATF PROPN NNP Number=Sing _ _ _ _ 30 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 9058 # text = These mutations were introduced in the tax gene of the ACH functional molecular clone of HTLV-1, and virus produced from the mutant ACH clones was examined for the ability to replicate and immortalize primary human lymphocytes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 mutations mutation NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 introduced introduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 tax tax NOUN NN Number=Sing _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 ACH ACh DET DT _ _ _ _ _ 12 functional functional ADJ JJ Degree=Pos _ _ _ _ 13 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 14 clone clone NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 virus virus NOUN NN Number=Sing _ _ _ _ 22 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 26 ACH ACh NOUN NN Number=Sing _ _ _ _ 27 clones clone NOUN NNS Number=Plur _ _ _ _ 28 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 29 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 ability ability NOUN NN Number=Sing _ _ _ _ 33 to to PART TO _ _ _ _ _ 34 replicate replicate VERB VB VerbForm=Inf _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 immortalize immortalize VERB VB VerbForm=Inf _ _ _ _ 37 primary primary ADJ JJ Degree=Pos _ _ _ _ 38 human human ADJ JJ Degree=Pos _ _ _ _ 39 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 9059 # text = While virus derived from the clone containing the M47 mutation retained the ability to immortalize T lymphocytes, the M22 mutant lost the ability to immortalize infected cells. 1 While while SCONJ IN _ _ _ _ _ 2 virus virus NOUN NN Number=Sing _ _ _ _ 3 derived derive VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 clone clone NOUN NN Number=Sing _ _ _ _ 7 containing contain VERB VBG VerbForm=Ger _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 M47 M47 NOUN NN Number=Sing _ _ _ _ 10 mutation mutation NOUN NN Number=Sing _ _ _ _ 11 retained retain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 ability ability NOUN NN Number=Sing _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 immortalize immortalize VERB VB VerbForm=Inf _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 M22 M22 PROPN NNP Number=Sing _ _ _ _ 21 mutant mutant NOUN NN Number=Sing _ _ _ _ 22 lost lose VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 ability ability NOUN NN Number=Sing _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 immortalize immortalize VERB VB VerbForm=Inf _ _ _ _ 27 infected infect ADJ JJ Degree=Pos _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 9060 # text = These results indicate that activation of the CREB/ATF pathway by Tax is dispensable for the immortalization of T cells by HTLV-1, whereas activation of the NF-kappaB pathway may be critical. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 / / PUNCT , _ _ _ _ SpaceAfter=No 10 ATF ATF PROPN NNP Number=Sing _ _ _ _ 11 pathway pathway NOUN NN Number=Sing _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 Tax tax PROPN NNP Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 dispensable dispensable ADJ JJ Degree=Pos _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 immortalization immortalization NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 whereas whereas SCONJ IN _ _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 34 pathway pathway NOUN NN Number=Sing _ _ _ _ 35 may may AUX MD VerbForm=Fin _ _ _ _ 36 be be AUX VB VerbForm=Inf _ _ _ _ 37 critical critical ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9061 # text = Document 0030011679 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011679 0030011679 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9062 # text = Human immunodeficiency virus type 1 long terminal repeat quasispecies differ in basal transcription and nuclear factor recruitment in human glial cells and lymphocytes. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 3 virus virus NOUN NN Number=Sing _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ _ 5 1 1 NUM CD NumType=Card _ _ _ _ 6 long long ADJ JJ Degree=Pos _ _ _ _ 7 terminal terminal NOUN NN Number=Sing _ _ _ _ 8 repeat repeat VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 quasispecies quasispecy NOUN NNS Number=Plur _ _ _ _ 10 differ differ VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 basal basal ADJ JJ Degree=Pos _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 glial glial ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9063 # text = The generation of genomic diversity during the course of infection has the potential to affect all aspects of HIV-1 replication, including expression of the proviral genome. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 generation generation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 5 diversity diversity NOUN NN Number=Sing _ _ _ _ 6 during during ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 course course NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 infection infection NOUN NN Number=Sing _ _ _ _ 11 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 potential potential NOUN NN Number=Sing _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 affect affect VERB VB VerbForm=Inf _ _ _ _ 16 all all DET DT _ _ _ _ _ 17 aspects aspect NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 including include VERB VBG VerbForm=Ger _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 proviral proviral ADJ JJ Degree=Pos _ _ _ _ 29 genome genome NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 9064 # text = To gain a better understanding of the impact of long terminal repeat (LTR) sequence diversity on LTR-directed gene expression in cells of the central nervous system (CNS) and immune system, we amplified and cloned LTRs from proviral DNA in HIV-1-infected peripheral blood. 1 To to PART TO _ _ _ _ _ 2 gain gain VERB VB VerbForm=Inf _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 better better ADJ JJR Degree=Cmp _ _ _ _ 5 understanding understanding NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 impact impact NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 long long ADJ JJ Degree=Pos _ _ _ _ 11 terminal terminal NOUN NN Number=Sing _ _ _ _ 12 repeat repeat NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 LTR LTR NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 sequence sequence NOUN NN Number=Sing _ _ _ _ 17 diversity diversity NOUN NN Number=Sing _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 LTR- LTR- X AFX _ _ _ _ SpaceAfter=No 20 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 gene gene ADJ JJ Degree=Pos _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 central central ADJ JJ Degree=Pos _ _ _ _ 28 nervous nervous ADJ JJ Degree=Pos _ _ _ _ 29 system system NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 CNS Cn NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 immune immune ADJ JJ Degree=Pos _ _ _ _ 35 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 38 amplified amplify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 LTRs LTR NOUN NNS Number=Plur _ _ _ _ 42 from from ADP IN _ _ _ _ _ 43 proviral proviral ADJ JJ Degree=Pos _ _ _ _ 44 DNA dna NOUN NN Number=Sing _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 51 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 52 blood blood NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 9065 # text = Sequence analysis of nineteen LTRs cloned from 2 adult and 3 pediatric patients revealed an average of 33 nucleotide changes (with respect to the sequence of the LAI LTR) within the 455-bp U3 region. 1 Sequence sequence NOUN NN Number=Sing _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 nineteen nineteen NUM CD NumType=Card _ _ _ _ 5 LTRs LTRs NOUN NNS Number=Plur _ _ _ _ 6 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 2 2 NUM CD NumType=Card _ _ _ _ 9 adult adult NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 3 3 NUM CD NumType=Card _ _ _ _ 12 pediatric pediatric ADJ JJ Degree=Pos _ _ _ _ 13 patients patient NOUN NNS Number=Plur _ _ _ _ 14 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 average average NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 33 33 NUM CD NumType=Card _ _ _ _ 19 nucleotide nucleotide NOUN NN Number=Sing _ _ _ _ 20 changes change NOUN NNS Number=Plur _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 with with ADP IN _ _ _ _ _ 23 respect respect NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 sequence sequence NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 LAI LAI PROPN NNP Number=Sing _ _ _ _ 30 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 within within ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 455 455 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 bp bp NOUN NN Number=Sing _ _ _ _ 37 U3 U3 NUM CD NumType=Card _ _ _ _ 38 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 9066 # text = Transient expression analyses in cells of neuroglial and lymphocytic origin demonstrated that some of these LTRs had activities which varied significantly from the LAI LTR in U-373 MG cells (an astrocytoma cell line) as well as in Jurkat cells (a CD4-positive lymphocyte cell line). 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 analyses analysis NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 neuroglial neuroglial ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 lymphocytic lymphocytic ADJ JJ Degree=Pos _ _ _ _ 10 origin origin NOUN NN Number=Sing _ _ _ _ 11 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 some some DET DT _ _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 16 LTRs LTR NOUN NNS Number=Plur _ _ _ _ 17 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 activities activity NOUN NNS Number=Plur _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 varied vary VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 significantly significantly ADV RB _ _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 LAI LAI PROPN NNP Number=Sing _ _ _ _ 25 LTR LTR PROPN NNP Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 373 373 NUM CD NumType=Card _ _ _ _ 30 MG Mg NOUN NN Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 astrocytoma astrocytoma NOUN NN Number=Sing _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ _ 36 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 as as ADV RB _ _ _ _ _ 39 well well ADV RB Degree=Pos _ _ _ _ 40 as as ADP IN _ _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ _ 44 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 45 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 46 CD4 CD4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 positive positive ADJ JJ Degree=Pos _ _ _ _ 49 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 50 cell cell NOUN NN Number=Sing _ _ _ _ 51 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 9067 # text = While LTRs which demonstrated the highest activities in U-373 MG cells also yielded high activities in Jurkat cells, the LTRs were generally more active in Jurkat cells when compared to the LAI LTR. 1 While while SCONJ IN _ _ _ _ _ 2 LTRs LTR NOUN NNS Number=Plur _ _ _ _ 3 which which PRON WDT PronType=Rel _ _ _ _ 4 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 highest highest ADJ JJS Degree=Sup _ _ _ _ 7 activities activity NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 373 373 NUM CD NumType=Card _ _ _ _ 12 MG Mg NOUN NN Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 yielded yield VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 high high ADJ JJ Degree=Pos _ _ _ _ 17 activities activity NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 LTRs LTRs PROPN NNPS Number=Plur _ _ _ _ 24 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 generally generally ADV RB _ _ _ _ _ 26 more more ADV RBR _ _ _ _ _ 27 active active ADJ JJ Degree=Pos _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 when when ADV WRB PronType=Int _ _ _ _ 32 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 LAI LAI PROPN NNP Number=Sing _ _ _ _ 36 LTR. LTR. PROPN NNP Number=Sing _ _ _ _ # sent_id = 9068 # text = Differences in LTR sequence also resulted in differences in transcription factor recruitment to cis-acting sites within the U3 region of the LTR, as demonstrated by electrophoretic mobility shift assays. 1 Differences difference NOUN NNS Number=Plur _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 LTR LTR PROPN NNP Number=Sing _ _ _ _ 4 sequence sequence NOUN NN Number=Sing _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 differences difference NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 cis cis DET DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 15 -acting -act ADJ JJ Degree=Pos _ _ _ _ 16 sites site NOUN NNS Number=Plur _ _ _ _ 17 within within ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 U3 U3 NOUN NN Number=Sing _ _ _ _ 20 region region NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 LTR Ltr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 as as SCONJ IN _ _ _ _ _ 26 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 29 mobility mobility NOUN NN Number=Sing _ _ _ _ 30 shift shift NOUN NN Number=Sing _ _ _ _ 31 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 9069 # text = In particular, naturally occurring sequence variation impacted transcription factor binding to an activating transcription factor/cAMP response element binding (ATF/CREB) binding site (located between the LEF-1 and distal NF-kappaB transcription factor binding sites) that we identified in previous studies of the HIV-1 LTR. 1 In in ADP IN _ _ _ _ _ 2 particular particular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 naturally naturally ADV RB _ _ _ _ _ 5 occurring occurre VERB VBG VerbForm=Ger _ _ _ _ 6 sequence sequence NOUN NN Number=Sing _ _ _ _ 7 variation variation NOUN NN Number=Sing _ _ _ _ 8 impacted impact VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 activating activating VERB VBG VerbForm=Ger _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 cAMP camp NOUN NN Number=Sing _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ _ 20 element element NOUN NN Number=Sing _ _ _ _ 21 binding bind VERB VBG VerbForm=Ger _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 ATF ATF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 / / PUNCT , _ _ _ _ SpaceAfter=No 25 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 binding bind VERB VBG VerbForm=Ger _ _ _ _ 28 site site NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 between between ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 LEF LEF NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 distal distal ADJ JJ Degree=Pos _ _ _ _ 38 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 41 transcription transcription NOUN NN Number=Sing _ _ _ _ 42 factor factor NOUN NN Number=Sing _ _ _ _ 43 binding binding VERB VBG VerbForm=Ger _ _ _ _ 44 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ _ 46 that that PRON WDT PronType=Rel _ _ _ _ 47 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 48 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 49 in in ADP IN _ _ _ _ _ 50 previous previous ADJ JJ Degree=Pos _ _ _ _ 51 studies study NOUN NNS Number=Plur _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 the the DET DT Definite=Def|PronType=Art _ _ _ _ 54 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 55 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 56 1 1 NUM CD NumType=Card _ _ _ _ 57 LTR Ltr NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 9070 # text = These findings suggest that LTR sequence changes can significantly affect basal LTR function and transcription factor recruitment, which may, in turn, alter the course of viral replication in cells of CNS and immune system origin. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 LTR Ltr PROPN NNP Number=Sing _ _ _ _ 6 sequence sequence NOUN NN Number=Sing _ _ _ _ 7 changes change NOUN NNS Number=Plur _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 significantly significantly ADV RB _ _ _ _ _ 10 affect affect VERB VB VerbForm=Inf _ _ _ _ 11 basal basal ADJ JJ Degree=Pos _ _ _ _ 12 LTR Ltr NOUN NN Number=Sing _ _ _ _ 13 function function NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 recruitment recruitment NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 may may AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 turn turn NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 alter alter VERB VB VerbForm=Inf _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 course course NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 viral viral ADJ JJ Degree=Pos _ _ _ _ 30 replication replication NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 CNS Cn NOUN NNS Number=Plur _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 immune immune ADJ JJ Degree=Pos _ _ _ _ 37 system system NOUN NN Number=Sing _ _ _ _ 38 origin origin NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9071 # text = Document 0030011683 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011683 0030011683 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9072 # text = GATA transcription factors associate with a novel class of nuclear bodies in erythroblasts and megakaryocytes. 1 GATA GATa ADJ JJ Degree=Pos _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 associate associate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 novel novel NOUN NN Number=Sing _ _ _ _ 8 class class NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 bodies body NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 erythroblasts erythroblast NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 megakaryocytes megakaryocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9073 # text = The nuclear distribution of GATA transcription factors in murine haemopoietic cells was examined by indirect immunofluorescence. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 distribution distribution NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 GATA GATA PROPN NNP Number=Sing _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factors factor NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 murine murine ADJ JJ Degree=Pos _ _ _ _ 10 haemopoietic haemopoietic ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 indirect indirect ADJ JJ Degree=Pos _ _ _ _ 16 immunofluorescence immunofluorescence NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 9074 # text = Specific bright foci of GATA-1 fluorescence were observed in erythroleukaemia cells and primary murine erythroblasts and megakaryocytes, in addition to diffuse nucleoplasmic localization. 1 Specific specific ADJ JJ Degree=Pos _ _ _ _ 2 bright bright ADJ JJ Degree=Pos _ _ _ _ 3 foci foci NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 fluorescence fluorescence NOUN NN Number=Sing _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 erythroleukaemia erythroleukaemia ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 primary primary ADJ JJ Degree=Pos _ _ _ _ 16 murine murine NOUN NN Number=Sing _ _ _ _ 17 erythroblasts erythroblast NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 megakaryocytes megakaryocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 addition addition NOUN NN Number=Sing _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 diffuse diffuse VERB VB VerbForm=Inf _ _ _ _ 25 nucleoplasmic nucleoplasmic ADJ JJ Degree=Pos _ _ _ _ 26 localization localization NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 9075 # text = These foci, which were preferentially found adjacent to nucleoli or at the nuclear periphery, did not represent sites of active transcription or binding of GATA-1 to consensus sites in the beta-globin loci. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 foci foci NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 preferentially preferentially ADV RB _ _ _ _ _ 7 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 nucleoli nucleoli PRON PRP _ _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 at at ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 periphery periphery NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 not not PART RB _ _ _ _ _ 19 represent represent VERB VB VerbForm=Inf _ _ _ _ 20 sites site NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 active active ADJ JJ Degree=Pos _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 binding binding VERB VBG VerbForm=Ger _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 consensus consensus NOUN NN Number=Sing _ _ _ _ 32 sites site NOUN NNS Number=Plur _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 globin globin NOUN NN Number=Sing _ _ _ _ 38 loci loci NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 9076 # text = Immunoelectron microscopy demonstrated the presence of intensely labelled structures likely to represent the GATA-1 foci seen by immunofluorescence. 1 Immunoelectron Immunoelectron PROPN NNP Number=Sing _ _ _ _ 2 microscopy microscopy NOUN NN Number=Sing _ _ _ _ 3 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 presence presence NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 intensely intensely ADV RB _ _ _ _ _ 8 labelled labell VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 structures structure NOUN NNS Number=Plur _ _ _ _ 10 likely likely ADV RB _ _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 represent represent VERB VB VerbForm=Inf _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 foci foci NOUN NN Number=Sing _ _ _ _ 18 seen see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 immunofluorescence immunofluorescence NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 9077 # text = The GATA-1 nuclear bodies differed from previously described nuclear structures and there was no co-localization with nuclear antigens involved in RNA processing or other ubiquitous (Spl, c-Jun and TBP) or haemopoietic (NF-E2) transcription factors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 bodies body NOUN NNS Number=Plur _ _ _ _ 7 differed differ VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 previously previously ADV RB _ _ _ _ _ 10 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 structures structure NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 there there PRON EX _ _ _ _ _ 15 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 no no DET DT _ _ _ _ _ 17 co co NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 -localization -localization NOUN NN Number=Sing _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 antigens antigen NOUN NNS Number=Plur _ _ _ _ 22 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 RNA RNA PROPN NNP Number=Sing _ _ _ _ 25 processing processing NOUN NN Number=Sing _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 other other ADJ JJ Degree=Pos _ _ _ _ 28 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 Spl Spl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 c- c- SYM NFP _ _ _ _ SpaceAfter=No 33 Jun Jun PROPN NNP Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 TBP TBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 or or CCONJ CC _ _ _ _ _ 38 haemopoietic haemopoietic NOUN NN Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 E2 e2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ _ 44 transcription transcription NOUN NN Number=Sing _ _ _ _ 45 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 9078 # text = Interestingly, GATA-2 and GATA-3 proteins also localized to the same nuclear bodies in cell lines co-expressing GATA-1 and -2 or GATA-1 and -3 gene products. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 3 3 NUM CD NumType=Card _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ _ 11 also also ADV RB _ _ _ _ _ 12 localized localize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 same same ADJ JJ Degree=Pos _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 bodies body NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 lines line NOUN NNS Number=Plur _ _ _ _ 21 co-expressing co-expresse VERB VBG VerbForm=Ger _ _ _ _ 22 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 - - SYM SYM _ _ _ _ SpaceAfter=No 34 3 3 NUM CD NumType=Card _ _ _ _ 35 gene gene ADJ JJ Degree=Pos _ _ _ _ 36 products product NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 9079 # text = This pattern of distribution is, thus far, unique to the GATA transcription factors and suggests a protein-protein interaction with other components of the nuclear bodies via the GATA zinc finger domain. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 pattern pattern NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 distribution distribution NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 thus thus ADV RB _ _ _ _ _ 8 far far ADV RB Degree=Pos _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 unique unique ADJ JJ Degree=Pos _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 GATA GATA PROPN NNP Number=Sing _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 interaction interaction NOUN NN Number=Sing _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 other other ADJ JJ Degree=Pos _ _ _ _ 24 components component NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 28 bodies body NOUN NNS Number=Plur _ _ _ _ 29 via via ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 GATA GATa PROPN NNP Number=Sing _ _ _ _ 32 zinc zinc NOUN NN Number=Sing _ _ _ _ 33 finger finger NOUN NN Number=Sing _ _ _ _ 34 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9080 # text = Document 0030011685 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011685 0030011685 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9081 # text = Inhibition of NF-kappa B by sodium salicylate and aspirin [see comments] 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 sodium sodium NOUN NN Number=Sing _ _ _ _ 9 salicylate salicylate NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 aspirin aspirin NOUN NN Number=Sing _ _ _ _ 12 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 see see VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 14 comments comment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 9082 # text = The transcription factor nuclear factor-kappa B (NF-kappa B) is critical for the inducible expression of multiple cellular and viral genes involved in inflammation and infection including interleukin-1 (IL-1), IL-6, and adhesion molecules. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 critical critical ADJ JJ Degree=Pos _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 23 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 viral viral ADJ JJ Degree=Pos _ _ _ _ 26 genes gene NOUN NNS Number=Plur _ _ _ _ 27 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 infection infection NOUN NN Number=Sing _ _ _ _ 32 including include VERB VBG VerbForm=Ger _ _ _ _ 33 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - SYM SYM _ _ _ _ SpaceAfter=No 44 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 48 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 9083 # text = The anti-inflammatory drugs sodium salicylate and aspirin inhibited the activation of NF-kappa B, which further explains the mechanism of action of these drugs. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 3 drugs drug NOUN NNS Number=Plur _ _ _ _ 4 sodium sodium NOUN NN Number=Sing _ _ _ _ 5 salicylate salicylate NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 aspirin aspirin NOUN NN Number=Sing _ _ _ _ 8 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa PROPN NNP Number=Sing _ _ _ _ 15 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 further further ADV RB _ _ _ _ _ 19 explains explain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 action action NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 26 drugs drug NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 9084 # text = This inhibition prevented the degradation of the NF-kappa B inhibitor, I kappa B, and therefore NF-kappa B was retained in the cytosol. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 degradation degradation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 therefore therefore ADV RB _ _ _ _ _ 20 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappa kappa PROPN NNP Number=Sing _ _ _ _ 23 B b PROPN NNP Number=Sing _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 retained retain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 cytosol cytosol NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 9085 # text = Sodium salicylate and aspirin also inhibited NF-kappa B-dependent transcription from the Ig kappa enhancer and the human immunodeficiency virus (HIV) long terminal repeat (LTR) in transfected T cells. 1 Sodium sodium PROPN NNP Number=Sing _ _ _ _ 2 salicylate salicylate VERB VB VerbForm=Inf _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 aspirin aspirin VERB VB VerbForm=Inf _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 Ig ig PROPN NNP Number=Sing _ _ _ _ 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 23 virus virus NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 long long ADJ JJ Degree=Pos _ _ _ _ 28 terminal terminal NOUN NN Number=Sing _ _ _ _ 29 repeat repeat NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 transfected transfect ADJ JJ Degree=Pos _ _ _ _ 35 T t PROPN NNP Number=Sing _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9086 # text = Document 0030011687 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011687 0030011687 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9087 # text = Costimulation of peripheral blood T cell activation by human endothelial cells. 1 Costimulation Costimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 4 blood blood NOUN NN Number=Sing _ _ _ _ 5 T t NOUN NN Number=Sing _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 9088 # text = Enhanced IL-2 transcription correlates with increased c-fos synthesis and increased Fos content of AP-1. 1 Enhanced enhance PROPN NNP Number=Sing _ _ _ _ 2 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 fos fo NOUN NNS Number=Plur _ _ _ _ 12 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 Fos Fos NOUN NNS Number=Plur _ _ _ _ 16 content content NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9089 # text = Endothelial cells (EC) act as APC for resting PBL in vitro, and may have important roles in vivo in the pathogenesis of allograft rejection and delayed hypersensitivity. 1 Endothelial Endothelial ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 act act NOUN NN Number=Sing _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 APC APC PROPN NNP Number=Sing _ _ _ _ 9 for for SCONJ IN _ _ _ _ _ 10 resting rest VERB VBG VerbForm=Ger _ _ _ _ 11 PBL PBL PROPN NNP Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 vitro vitro PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 may may AUX MD VerbForm=Fin _ _ _ _ 17 have have VERB VB VerbForm=Inf _ _ _ _ 18 important important ADJ JJ Degree=Pos _ _ _ _ 19 roles role NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 vivo vivo NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 allograft allograft NOUN NN Number=Sing _ _ _ _ 27 rejection rejection NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 delayed delayed ADJ JJ Degree=Pos _ _ _ _ 30 hypersensitivity hypersensitivity NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 9090 # text = We previously reported that human umbilical vein EC provide costimulatory signals to PHA-stimulated PBL via CD2:lymphocyte function-associated Ag-3 and an unidentified ligand pair, resulting in a three- to eight-fold enhancement of IL-2 production. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 previously previously ADV RB _ _ _ _ _ 3 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 7 vein vein NOUN NN Number=Sing _ _ _ _ 8 EC EC PROPN NNP Number=Sing _ _ _ _ 9 provide provide VERB VB VerbForm=Inf _ _ _ _ 10 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 11 signals signal NOUN NNS Number=Plur _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 PHA PHA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 PBL pBl NOUN NN Number=Sing _ _ _ _ 17 via via ADP IN _ _ _ _ _ 18 CD2 CD2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 : : PUNCT : _ _ _ _ SpaceAfter=No 20 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 21 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 Ag ag NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 3 3 NUM CD NumType=Card _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 unidentified unidentified ADJ JJ Degree=Pos _ _ _ _ 30 ligand ligand NOUN NN Number=Sing _ _ _ _ 31 pair pair NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 resulting result VERB VBG VerbForm=Ger _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 three three NUM CD NumType=Card _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ _ 38 to to ADP IN _ _ _ _ _ 39 eight eight NUM CD NumType=Card _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 fold fold NOUN NN Number=Sing _ _ _ _ 42 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 2 2 NUM CD NumType=Card _ _ _ _ 47 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 9091 # text = The physiologic relevance of this increase was demonstrated by the proliferative advantage provided by EC to PBL suboptimally stimulated with mAb OKT3. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 physiologic physiologic NOUN NN Number=Sing _ _ _ _ 3 relevance relevance NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 increase increase NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 12 advantage advantage NOUN NN Number=Sing _ _ _ _ 13 provided provide VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 EC EC PROPN NNP Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 PBL PBL PROPN NNP Number=Sing _ _ _ _ 18 suboptimally suboptimally ADV RB _ _ _ _ _ 19 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 mAb mAb PROPN NNP Number=Sing _ _ _ _ 22 OKT3 OKT3 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 9092 # text = We now report that EC costimulation causes increased levels of IL-2 mRNA as a result of increased IL-2 transcription in PBL. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 now now ADV RB _ _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 EC EC PROPN NNP Number=Sing _ _ _ _ 6 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 7 causes cause NOUN NNS Number=Plur _ _ _ _ 8 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 levels level NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 result result NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 PBL PBL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 9093 # text = We therefore examined the effects of EC on T cell nuclear factors known to regulate IL-2 transcription, including c-jun and c-fos-two components of the transcription factor AP-1, NFAT, and others. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 therefore therefore ADV RB _ _ _ _ _ 3 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 EC EC PROPN NNP Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cell cell VERB VB VerbForm=Inf _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 16 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 including include VERB VBG VerbForm=Ger _ _ _ _ 22 c- c- SYM NFP _ _ _ _ SpaceAfter=No 23 jun jun NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 c- c- SYM NFP _ _ _ _ SpaceAfter=No 26 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 two two NUM CD NumType=Card _ _ _ _ 29 components component NOUN NNS Number=Plur _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 transcription transcription NOUN NN Number=Sing _ _ _ _ 33 factor factor NOUN NN Number=Sing _ _ _ _ 34 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 others other NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 9094 # text = PBL constitutively express c-jun transcripts, and the level of c-jun mRNA is not altered by PHA activation in the absence or presence of EC. 1 PBL pBl AUX MD VerbForm=Fin _ _ _ _ 2 constitutively constitutively ADV RB _ _ _ _ _ 3 express express VERB VB VerbForm=Inf _ _ _ _ 4 c- c- SYM NFP _ _ _ _ SpaceAfter=No 5 jun jun NOUN NN Number=Sing _ _ _ _ 6 transcripts transcript NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 level level NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 c- c- SYM NFP _ _ _ _ SpaceAfter=No 13 jun jun NOUN NN Number=Sing _ _ _ _ 14 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 altered alter VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 PHA PHa DET DT Definite=Ind|PronType=Art _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 absence absence NOUN NN Number=Sing _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 presence presence NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 9095 # text = In contrast, c-fos mRNA is absent from resting T cells and is induced on PHA activation. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 c- c- PUNCT : _ _ _ _ SpaceAfter=No 5 fos fo VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 absent absend VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 from from SCONJ IN _ _ _ _ _ 10 resting rest VERB VBG VerbForm=Ger _ _ _ _ 11 T T PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 PHA PHa DET DT Definite=Ind|PronType=Art _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 9096 # text = EC alone do not induce c-fos mRNA but augment the level of c-fos mRNA in PHA-activated 1 EC EC PROPN NNP Number=Sing _ _ _ _ 2 alone alone ADV RB _ _ _ _ _ 3 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 induce induce VERB VB VerbForm=Inf _ _ _ _ 6 c- c- PUNCT : _ _ _ _ SpaceAfter=No 7 fos fo NOUN NNS Number=Plur _ _ _ _ 8 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 augment augment VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 level level NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 fos fo NOUN NNS Number=Plur _ _ _ _ 17 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 PHA PHA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ # sent_id = 9097 # text = T cells by 3- to 10-fold. 1 T t ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - SYM SYM _ _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 9098 # text = This effect is largely independent of the CD2:lymphocyte function-associated Ag-3 pathway. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 largely largely ADV RB _ _ _ _ _ 5 independent independent ADJ JJ Degree=Pos _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 CD2 Cd2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 : : PUNCT : _ _ _ _ SpaceAfter=No 10 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 11 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 Ag ag NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 3 3 NUM CD NumType=Card _ _ _ _ 17 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 9099 # text = Gel-shift analysis reveals the constitutive presence of nuclear factors in resting PBL that bind to the proximal AP-1 site of the IL-2 promoter and that contain immunoreactive c-Jun but not c-Fos protein. 1 Gel gel NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 reveals reveal VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 8 presence presence NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ _ 12 in in SCONJ IN _ _ _ _ _ 13 resting rest VERB VBG VerbForm=Ger _ _ _ _ 14 PBL PBL PROPN NNP Number=Sing _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 20 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 site site NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 that that PRON WDT PronType=Rel _ _ _ _ 32 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 immunoreactive immunoreactive ADJ JJ Degree=Pos _ _ _ _ 34 c- c- SYM NFP _ _ _ _ SpaceAfter=No 35 Jun Jun PROPN NNP Number=Sing _ _ _ _ 36 but but CCONJ CC _ _ _ _ _ 37 not not PART RB _ _ _ _ _ 38 c class ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 Fos Fos ADJ JJ Degree=Pos _ _ _ _ 41 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 9100 # text = In contrast, AP-1 from PHA-activated cells contains c-Jun and low levels of c-Fos. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 PHA PHA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 c- c- SYM NFP _ _ _ _ SpaceAfter=No 14 Jun Jun PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 low low ADJ JJ Degree=Pos _ _ _ _ 17 levels level NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 Fos Fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 9101 # text = Strikingly, costimulation with EC results in a dramatic increase (up to 15-fold) in the c-Fos content of AP-1. 1 Strikingly strikingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 EC EC PROPN NNP Number=Sing _ _ _ _ 6 results result NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 dramatic dramatic ADJ JJ Degree=Pos _ _ _ _ 10 increase increase NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 up up ADP IN _ _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 15 15 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT : _ _ _ _ SpaceAfter=No 16 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 Fos Fos PROPN NNP Number=Sing _ _ _ _ 23 content content NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 9102 # text = Levels of other nuclear factors involved in IL-2 regulation were not altered by EC, although NFAT-DNA complexes migrated at a slightly different mobility. 1 Levels level NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factors factor NOUN NNS Number=Plur _ _ _ _ 6 involved involve ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 regulation regulation NOUN NN Number=Sing _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 altered alter VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 although although SCONJ IN _ _ _ _ _ 19 NFAT Nfat ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 DNA dna NOUN NN Number=Sing _ _ _ _ 22 complexes complex NOUN NNS Number=Plur _ _ _ _ 23 migrated migrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 at at ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 slightly slightly ADV RB _ _ _ _ _ 27 different different ADJ JJ Degree=Pos _ _ _ _ 28 mobility mobility NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 9103 # text = In summary, our data suggest that changes in the composition of transcription factor AP-1 is a key molecular mechanism for increasing IL-2 transcription and may underlie the phenomenon of costimulation by EC. 1 In in ADP IN _ _ _ _ _ 2 summary summary NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 5 data data NOUN NN Number=Sing _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 changes change NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 composition composition NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 key key ADJ JJ Degree=Pos _ _ _ _ 21 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 22 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 23 for for SCONJ IN _ _ _ _ _ 24 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 may may AUX MD VerbForm=Fin _ _ _ _ 31 underlie underlie VERB VB VerbForm=Inf _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 phenomenon phenomenon NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9104 # text = Document 0030011690 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011690 0030011690 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9105 # text = c-Rel is a target of pentoxifylline-mediated inhibition of T lymphocyte activation. 1 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 Rel Rel NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 target target NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 pentoxifylline pentoxifylline NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9106 # text = The possible clinical use of the methyl xanthine derivative, pentoxifylline (PF), for the treatment of T cell-dependent diseases is being noted with increasing interest. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 possible possible ADJ JJ Degree=Pos _ _ _ _ 3 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 4 use use NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 methyl methyl ADJ JJ Degree=Pos _ _ _ _ 8 xanthine xanthine NOUN NN Number=Sing _ _ _ _ 9 derivative derivative NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 pentoxifylline pentoxifylline NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 PF PF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 treatment treatment NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 24 diseases diseasis NOUN NNS Number=Plur _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 being be AUX VBG VerbForm=Ger _ _ _ _ 27 noted note VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 with with SCONJ IN _ _ _ _ _ 29 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 30 interest interest NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 9107 # text = In this paper, we studied the molecular consequences of PF treatment during lymphocyte activation. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 paper paper NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 9 consequences consequence NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 PF Pf NOUN NN Number=Sing _ _ _ _ 12 treatment treatment NOUN NN Number=Sing _ _ _ _ 13 during during ADP IN _ _ _ _ _ 14 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 9108 # text = We found that in T cells, anti-CD3-induced c-Rel expression was blocked by PF, whereas the induction of other NF-kappaB family members was not significantly affected. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 -induced -induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 c- c- PUNCT , _ _ _ _ SpaceAfter=No 11 Rel Rel PROPN NNP Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 PF PF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 whereas whereas SCONJ IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 induction induction NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 other other ADJ JJ Degree=Pos _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 26 family family NOUN NN Number=Sing _ _ _ _ 27 members member NOUN NNS Number=Plur _ _ _ _ 28 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 29 not not PART RB _ _ _ _ _ 30 significantly significantly ADV RB _ _ _ _ _ 31 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 9109 # text = However, induction of NF-AT, which has the same signaling requirements as c-Rel induction, was not inhibited by PF. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 induction induction NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 which which PRON WDT PronType=Rel _ _ _ _ 10 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 same same ADJ JJ Degree=Pos _ _ _ _ 13 signaling signaling NOUN NN Number=Sing _ _ _ _ 14 requirements requirement NOUN NNS Number=Plur _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 Rel Rel NOUN NN Number=Sing _ _ _ _ 19 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 PF PF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 9110 # text = Among genes that respond to these transcription factors, IL-2 mRNA induction was suppressed by PF, whereas IL-2R(alpha) chain mRNA induction was not affected. 1 Among among ADJ JJ Degree=Pos _ _ _ _ 2 genes gene NOUN NNS Number=Plur _ _ _ _ 3 that that PRON WDT PronType=Rel _ _ _ _ 4 respond respond VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 14 induction induction NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 PF PF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 whereas whereas SCONJ IN _ _ _ _ _ 21 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2R 2r PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 alpha alpha X FW Foreign=Yes _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 chain chain NOUN NN Number=Sing _ _ _ _ 28 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 29 induction induction NOUN NN Number=Sing _ _ _ _ 30 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 31 not not PART RB _ _ _ _ _ 32 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 9111 # text = These observations implicated c-Rel as an IL-2 promoter factor, for which experimental support was obtained from transient transfection experiments. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 implicated implicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 c- c- PUNCT : _ _ _ _ SpaceAfter=No 5 Rel Rel NOUN NN Number=Sing _ _ _ _ 6 as as ADP IN _ _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 experimental experimental ADJ JJ Degree=Pos _ _ _ _ 17 support support NOUN NN Number=Sing _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 obtained obtain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 transient transient ADJ JJ Degree=Pos _ _ _ _ 22 transfection transfection NOUN NN Number=Sing _ _ _ _ 23 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 9112 # text = In contrast with the observation in T cells, c-Rel induction was not blocked by PF in B cells. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 observation observation NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 Rel Rel NOUN NN Number=Sing _ _ _ _ 13 induction induction NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 PF PF PROPN NNP Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 B b ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 9113 # text = The greater selectivity of PF, compared with FK506, at both the molecular and cellular levels may prove advantageous in manipulating T cell responses in vivo. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 greater greater ADJ JJR Degree=Cmp _ _ _ _ 3 selectivity selectivity NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 PF PF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 FK506 FK506 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 at at ADP IN _ _ _ _ _ 12 both both CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 17 levels level NOUN NNS Number=Plur _ _ _ _ 18 may may AUX MD VerbForm=Fin _ _ _ _ 19 prove prove VERB VB VerbForm=Inf _ _ _ _ 20 advantageous advantageous ADJ JJ Degree=Pos _ _ _ _ 21 in in SCONJ IN _ _ _ _ _ 22 manipulating manipulat VERB VBG VerbForm=Ger _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 responses response NOUN NNS Number=Plur _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 vivo. vivo. NOUN NN Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9114 # text = Document 0030011694 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011694 0030011694 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9115 # text = Calcineurin potentiates activation of the granulocyte-macrophage colony-stimulating factor gene in T cells: involvement of the conserved lymphokine element 0. 1 Calcineurin Calcineurin PROPN NNP Number=Sing _ _ _ _ 2 potentiates potentiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 9 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 stimulating stimulate VERB VBG VerbForm=Ger _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 : : PUNCT : _ _ _ _ _ 18 involvement involvement NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 23 element element NOUN NN Number=Sing _ _ _ _ 24 0 0 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9116 # text = Granulocyte-macrophage colony-stimulating factor (GM-CSF) and interleukin-2 (IL-2) are produced by stimulation with phorbol-12-myristate acetate (PMA) and calcium ionophore (A23187) in human T cell leukemia Jurkat cells. 1 Granulocyte Granulocyte ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 -macrophage -macrophage NOUN NN Number=Sing _ _ _ _ 3 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 stimulating stimulating NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 produced produce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 phorbol phorbol NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 myristate myristate NOUN NN Number=Sing _ _ _ _ 31 acetate acetate NOUN NN Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 calcium calcium NOUN NN Number=Sing _ _ _ _ 37 ionophore ionophore ADV RB _ _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 A23187 A23187 X LS _ _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 human human ADJ JJ Degree=Pos _ _ _ _ 43 T T PROPN NNP Number=Sing _ _ _ _ 44 cell cell NOUN NN Number=Sing _ _ _ _ 45 leukemia leukemia ADP IN _ _ _ _ _ 46 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 47 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 9117 # text = The expression of GM-CSF and IL-2 is inhibited by immunosuppressive drugs such as cyclosporin A (CsA) and FK506. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 CSF CSF PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 15 drugs drug NOUN NNS Number=Plur _ _ _ _ 16 such such ADJ JJ Degree=Pos _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 19 A a PROPN NNP Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 FK506 FK506 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 9118 # text = Earlier studies on the IL-2 gene expression showed that overexpression of calcineurin (CN), a Ca2+/calmodulin-dependent protein phosphatase, can stimulate transcription from the IL-2 promoter through the NF-AT-binding site. 1 Earlier earlier ADJ JJR Degree=Cmp _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 on on ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 12 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 CN CN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 Ca2+/calmodulin-dependent Ca2+/calmodulin-dependent ADJ JJ Degree=Pos _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ _ 22 phosphatase phosphatase NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 can can AUX MD VerbForm=Fin _ _ _ _ 25 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ _ 32 promoter promoter NOUN NN Number=Sing _ _ _ _ 33 through through ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 AT AT NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 binding bind VERB VBG VerbForm=Ger _ _ _ _ 40 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 9119 # text = In this study, we obtained evidence that transfection of the cDNAs for CN A (catalytic) and CN B (regulatory) subunits also augments transcription from the GM-CSF promoter and recovers the transcription inhibited by CsA. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 obtained obtain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 evidence evidence ADV RB NumType=Mult _ _ _ _ 8 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 9 transfection transfection NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 cDNAs cDNAs NOUN NNS Number=Plur _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 CN CN PROPN NNP Number=Sing _ _ _ _ 15 A a PROPN NNP Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 catalytic catalytic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 CN CN PROPN NNP Number=Sing _ _ _ _ 21 B B PROPN NNP Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 regulatory regulatory ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 subunits subunit NOUN NNS Number=Plur _ _ _ _ 26 also also ADV RB _ _ _ _ _ 27 augments augment VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 from from ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 CSF CSF PROPN NNP Number=Sing _ _ _ _ 34 promoter promoter NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 recovers recover VERB VB VerbForm=Inf _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 transcription transcription NOUN NN Number=Sing _ _ _ _ 39 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 by by ADP IN _ _ _ _ _ 41 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 9120 # text = The constitutively active type of the CN A subunit, which lacks the auto-inhibitory and calmodulin-binding domains, acts in synergy with PMA to activate transcription from the GM-CSF promoter. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 constitutively constitutively ADJ JJ Degree=Pos _ _ _ _ 3 active active ADJ JJ Degree=Pos _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 CN CN NOUN NN Number=Sing _ _ _ _ 8 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 subunit subunit NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 lacks lack VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 auto auto NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 calmodulin calmodulin NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 binding binding VERB VBG VerbForm=Ger _ _ _ _ 21 domains domain NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 acts act NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 synergy synergy NOUN NN Number=Sing _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 PMA PMA PROPN NNP Number=Sing _ _ _ _ 28 to to PART TO _ _ _ _ _ 29 activate activate VERB VB VerbForm=Inf _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ _ 31 from from ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 CSF CSF PROPN NNP Number=Sing _ _ _ _ 36 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 9121 # text = We also found that the active CN partially replaces calcium ionophore in synergy with PMA to induce expression of endogenous GM-CSF and IL-2. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 active active ADJ JJ Degree=Pos _ _ _ _ 7 CN CN PROPN NNP Number=Sing _ _ _ _ 8 partially partially ADV RB _ _ _ _ _ 9 replaces replace VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 calcium calcium NOUN NN Number=Sing _ _ _ _ 11 ionophore ionophore NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 synergy synergy NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 PMA PMA PROPN NNP Number=Sing _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 induce induce VERB VB VerbForm=Inf _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 21 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 CSF CSF PROPN NNP Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 9122 # text = By multimerizing the regulatory elements of the GM-CSF promoter, we found that one of the target sites for the CN action is the conserved lymphokine element 0 (CLE0), located at positions between -54 and -40. 1 By by SCONJ IN _ _ _ _ _ 2 multimerizing multimerize VERB VBG VerbForm=Ger _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 5 elements element NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 CSF CSF PROPN NNP Number=Sing _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 one one NUM CD NumType=Card _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 target target NOUN NN Number=Sing _ _ _ _ 20 sites site NOUN NNS Number=Plur _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 CN Cn VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 action action NOUN NN Number=Sing _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 29 element element NOUN NN Number=Sing _ _ _ _ 30 0 0 NUM CD NumType=Card _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 CLE0 CLE0 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 at at ADP IN _ _ _ _ _ 37 positions position NOUN NNS Number=Plur _ _ _ _ 38 between between ADP IN _ _ _ _ _ 39 - - SYM SYM _ _ _ _ SpaceAfter=No 40 54 54 NUM CD NumType=Card _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 - - SYM SYM _ _ _ _ SpaceAfter=No 43 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 9123 # text = Mobility shift assays showed that the CLE0 sequence has an AP1-binding site and is associated with an NF-AT-like factor, termed NF-CLE0 gamma. 1 Mobility Mobility NOUN NN Number=Sing _ _ _ _ 2 shift shift NOUN NN Number=Sing _ _ _ _ 3 assays assays NOUN NNS Number=Plur _ _ _ _ 4 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 CLE0 CLE0 PROPN NNP Number=Sing _ _ _ _ 8 sequence sequence NOUN NN Number=Sing _ _ _ _ 9 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 AP1 Ap1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 binding binding NOUN NN Number=Sing _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 AT at ADV RB _ _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 like like ADJ JJ Degree=Pos _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 CLE0 CLE0 PROPN NNP Number=Sing _ _ _ _ 31 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 9124 # text = NF-CLE0 gamma binding is induced by PMA/A23187 and is inhibited by treatment with CsA. 1 NF NF ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 CLE0 CLE0 NOUN NN Number=Sing _ _ _ _ 4 gamma gamma NOUN NN Number=Sing _ _ _ _ 5 binding binding VERB VBG VerbForm=Ger _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 A23187 A23187 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 treatment treatment NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 9125 # text = These results suggest that CN is involved in the coordinated induction of the GM-CSF and IL-2 genes and that the CLE0 sequence of the GM-CSF gene is a functional analogue of the NF-AT-binding site in the IL-2 promoter, which mediates signals downstream of T cell activation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 CN CN PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 involved involved ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 coordinated coordinate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 induction induction NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 CSF CSF PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 CLE0 CLE0 PROPN NNP Number=Sing _ _ _ _ 26 sequence sequence NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 CSF CSF PROPN NNP Number=Sing _ _ _ _ 32 gene gene NOUN NN Number=Sing _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 functional functional ADJ JJ Degree=Pos _ _ _ _ 36 analogue analogue NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 binding binding VERB VBG VerbForm=Ger _ _ _ _ 44 site site NOUN NN Number=Sing _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 2 2 NUM CD NumType=Card _ _ _ _ 50 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 , , PUNCT , _ _ _ _ _ 52 which which PRON WDT PronType=Rel _ _ _ _ 53 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 54 signals signal NOUN NNS Number=Plur _ _ _ _ 55 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 56 of of ADP IN _ _ _ _ _ 57 T t NUM CD NumType=Card _ _ _ _ 58 cell cell NOUN NN Number=Sing _ _ _ _ 59 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9126 # text = Document 0030011702 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011702 0030011702 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9127 # text = Distinct signaling properties identify functionally different CD4 epitopes. 1 Distinct distinct ADJ JJ Degree=Pos _ _ _ _ 2 signaling signaling NOUN NN Number=Sing _ _ _ _ 3 properties property NOUN NNS Number=Plur _ _ _ _ 4 identify identify VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 functionally functionally ADV RB _ _ _ _ _ 6 different different ADJ JJ Degree=Pos _ _ _ _ 7 CD4 Cd4 NOUN NN Number=Sing _ _ _ _ 8 epitopes epitope NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9128 # text = The CD4 coreceptor interacts with non-polymorphic regions of major histocompatibility complex class II molecules on antigen-presenting cells and contributes to T cell activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 CD4 CD4 NOUN NN Number=Sing _ _ _ _ 3 coreceptor coreceptor NOUN NN Number=Sing _ _ _ _ 4 interacts interact NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 non-polymorphic non-polymorphic ADJ JJ Degree=Pos _ _ _ _ 7 regions region NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 major major ADJ JJ Degree=Pos _ _ _ _ 10 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 11 complex complex NOUN NN Number=Sing _ _ _ _ 12 class class NOUN NN Number=Sing _ _ _ _ 13 II ii NUM CD NumType=Card _ _ _ _ 14 molecules molecule NOUN NNS Number=Plur _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 antigen antigen NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 presenting presenting VERB VBG VerbForm=Ger _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 contributes contribute NOUN NNS Number=Plur _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 9129 # text = We have investigated the effect of CD4 triggering on T cell activating signals in a lymphoma model using monoclonal antibodies (mAb) which recognize different CD4 epitopes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 8 triggering triggere VERB VBG VerbForm=Ger _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 activating activat VERB VBG VerbForm=Ger _ _ _ _ 13 signals signal NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 17 model model NOUN NN Number=Sing _ _ _ _ 18 using use VERB VBG VerbForm=Ger _ _ _ _ 19 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 20 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 mAb mAb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 recognize recognize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 different different ADJ JJ Degree=Pos _ _ _ _ 27 CD4 CD4 NOUN NN Number=Sing _ _ _ _ 28 epitopes epitope NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 9130 # text = We demonstrate that CD4 triggering delivers signals capable of activating the NF-AT transcription factor which is required for interleukin-2 gene expression. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 5 triggering trigger VERB VBG VerbForm=Ger _ _ _ _ 6 delivers deliver VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 signals signal NOUN NNS Number=Plur _ _ _ _ 8 capable capable ADJ JJ Degree=Pos _ _ _ _ 9 of of SCONJ IN _ _ _ _ _ 10 activating activat VERB VBG VerbForm=Ger _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 AT AT PROPN NNP Number=Sing _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 9131 # text = Whereas different anti-CD4 mAb or HIV-1 gp120 could all trigger activation of the protein tyrosine kinases p56lck and p59fyn and phosphorylation of the Shc adaptor protein, which mediates signals to Ras, they differed significantly in their ability to activate NF-AT. 1 Whereas whereas ADV RB _ _ _ _ _ 2 different different ADJ JJ Degree=Pos _ _ _ _ 3 anti-CD4 anti-CD4 ADP IN Abbr=Yes _ _ _ _ 4 mAb mAb PROPN NNP Number=Sing _ _ _ _ 5 or or CCONJ CC _ _ _ _ _ 6 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 gp120 gp120 NOUN NN Number=Sing _ _ _ _ 10 could could AUX MD VerbForm=Fin _ _ _ _ 11 all all DET DT _ _ _ _ _ 12 trigger trigger ADJ JJR Degree=Cmp _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 tyrosine tyrosine PRON PRP _ _ _ _ _ 18 kinases kinase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 p56lck p56lck NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 p59fyn p59fyn NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 Shc Shc PROPN NNP Number=Sing _ _ _ _ 27 adaptor adaptor NOUN NN Number=Sing _ _ _ _ 28 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 which which PRON WDT PronType=Rel _ _ _ _ 31 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 signals signal NOUN NNS Number=Plur _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 Ras Ras PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 37 differed differ VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 38 significantly significantly ADV RB _ _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 41 ability ability NOUN NN Number=Sing _ _ _ _ 42 to to PART TO _ _ _ _ _ 43 activate activate VERB VB VerbForm=Inf _ _ _ _ 44 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 9132 # text = Lack of full activation of NF-AT could be correlated to a dramatically reduced capacity to induce calcium flux and could be complemented with a calcium ionophore. 1 Lack lack NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 full full ADJ JJ Degree=Pos _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 AT AT PRON WDT PronType=Rel _ _ _ _ 9 could could AUX MD VerbForm=Fin _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 correlated correlate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 dramatically dramatically ADV RB _ _ _ _ _ 15 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 capacity capacity NOUN NN Number=Sing _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 induce induce VERB VB VerbForm=Inf _ _ _ _ 19 calcium calcium NOUN NN Number=Sing _ _ _ _ 20 flux flux NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 could could AUX MD VerbForm=Fin _ _ _ _ 23 be be AUX VB VerbForm=Inf _ _ _ _ 24 complemented complement VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 calcium calcium NOUN NN Number=Sing _ _ _ _ 28 ionophore ionophore NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 9133 # text = The results identify functionally distinct epitopes on the CD4 coreceptor involved in activation of the Ras/protein kinase C and calcium pathways. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 identify identify VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 functionally functionally ADV RB _ _ _ _ _ 5 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 6 epitopes epitope NOUN NNS Number=Plur _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 CD4 CD4 NOUN NN Number=Sing _ _ _ _ 10 coreceptor coreceptor NOUN NN Number=Sing _ _ _ _ 11 involved involve ADJ JJ Degree=Pos _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 Ras Ra NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 kinase kinase NOUN NN Number=Sing _ _ _ _ 20 C c NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 calcium calcium NOUN NN Number=Sing _ _ _ _ 23 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9134 # text = Document 0030011707 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011707 0030011707 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9135 # text = Inhibition of human immunodeficiency virus type 1 replication by a Tat-activated, transduced interferon gene: targeted expression to human immunodeficiency virus type 1-infected cells. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 type type NOUN NN Number=Sing _ _ _ _ 7 1 1 NUM CD NumType=Card _ _ _ _ 8 replication replication NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 Tat Tat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 transduced transduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 interferon interferon ADP IN _ _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 : : PUNCT : _ _ _ _ _ 19 targeted target VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 24 virus virus NOUN NN Number=Sing _ _ _ _ 25 type type NOUN NN Number=Sing _ _ _ _ 26 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9136 # text = We have examined the feasibility of using interferon (IFN) gene transfer as a novel approach to anti-human immunodeficiency virus type 1 (HIV-1) therapy in this study. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 feasibility feasibility NOUN NN Number=Sing _ _ _ _ 6 of of SCONJ IN _ _ _ _ _ 7 using use VERB VBG VerbForm=Ger _ _ _ _ 8 interferon interferon NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 transfer transfer NOUN NN Number=Sing _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 novel novel NOUN NN Number=Sing _ _ _ _ 17 approach approach NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 anti-human anti-human ADJ JJ Degree=Pos _ _ _ _ 20 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 21 virus virus NOUN NN Number=Sing _ _ _ _ 22 type type NOUN NN Number=Sing _ _ _ _ 23 1 1 NUM CD NumType=Card _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 therapy therapy NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 32 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 9137 # text = To limit expression of a transduced HIV-1 long terminal repeat (LTR)-IFNA2 (the new approved nomenclature for IFN genes is used throughout this article) hybrid gene to the HIV-1-infected cells, HIV-1 LTR was modified. 1 To to PART TO _ _ _ _ _ 2 limit limit VERB VB VerbForm=Inf _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 transduced transduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 long long ADJ JJ Degree=Pos _ _ _ _ 11 terminal terminal NOUN NN Number=Sing _ _ _ _ 12 repeat repeat NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 IFNA2 Ifna2 NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 new new ADJ JJ Degree=Pos _ _ _ _ 21 approved approve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 nomenclature nomenclature NOUN NN Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 IFN Ifn ADJ JJ Degree=Pos _ _ _ _ 25 genes gene NOUN NNS Number=Plur _ _ _ _ 26 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 throughout throughout ADP IN _ _ _ _ _ 29 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 30 article article NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 hybrid hybrid NOUN NN Number=Sing _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ _ 34 to to ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 1 1 NUM CD NumType=Card _ _ _ _ 46 LTR Ltr NOUN NN Number=Sing _ _ _ _ 47 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 48 modified modify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 9138 # text = Deletion of the NF-kappa B elements of the HIV-1 LTR significantly inhibited Tat-mediated transactivation in T-cell lines, as well as in a monocyte line, U937. 1 Deletion Deletion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 elements element NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 LTR Ltr NOUN NN Number=Sing _ _ _ _ 15 significantly significantly ADV RB _ _ _ _ _ 16 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 Tat Tat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 as as ADV RB _ _ _ _ _ 27 well well ADV RB Degree=Pos _ _ _ _ 28 as as ADP IN _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 32 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 U937 U937 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 9139 # text = Replacement of the NF-kappa B elements in the HIV-1 LTR by a DNA fragment derived from the 5'-flanking region of IFN-stimulated gene 15 (ISG15), containing the IFN-stimulated response element, partially restored Tat-mediated activation of LTR in T cells as well as in monocytes. 1 Replacement replacement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 elements element NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 LTR Ltr NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 DNA dna NOUN NN Number=Sing _ _ _ _ 18 fragment fragment NOUN NN Number=Sing _ _ _ _ 19 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 26 region region NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ _ 32 15 15 NUM CD NumType=Card _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 ISG15 ISG15 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 containing contain VERB VBG VerbForm=Ger _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 response response NOUN NN Number=Sing _ _ _ _ 43 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 partially partially ADV RB _ _ _ _ _ 46 restored restore VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 Tat Tat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 activation activation NOUN NN Number=Sing _ _ _ _ 51 of of ADP IN _ _ _ _ _ 52 LTR LTR PROPN NNP Number=Sing _ _ _ _ 53 in in ADP IN _ _ _ _ _ 54 T t PROPN NNP Number=Sing _ _ _ _ 55 cells cell NOUN NNS Number=Plur _ _ _ _ 56 as as ADV RB _ _ _ _ _ 57 well well ADV RB Degree=Pos _ _ _ _ 58 as as ADP IN _ _ _ _ _ 59 in in ADP IN _ _ _ _ _ 60 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ _ # sent_id = 9140 # text = Insertion of this chimeric promoter (ISG15 LTR) upstream of the human IFNA2 gene directed high levels of IFN synthesis in Tat-expressing cells, while this promoter was not responsive to tumor necrosis factor alpha-mediated activation. 1 Insertion Insertion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 chimeric chimeric NOUN NN Number=Sing _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 ISG15 ISG15 NUM CD NumType=Card _ _ _ _ 8 LTR LTR NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 upstream upstream NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 IFNA2 Ifna2 NOUN NN Number=Sing _ _ _ _ 15 gene gene PRON NN Number=Sing _ _ _ _ 16 directed direct VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 high high ADJ JJ Degree=Pos _ _ _ _ 18 levels level NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 IFN Ifn ADJ JJ Degree=Pos _ _ _ _ 21 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 Tat Tat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 while while SCONJ IN _ _ _ _ _ 29 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 30 promoter promoter NOUN NN Number=Sing _ _ _ _ 31 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 32 not not PART RB _ _ _ _ _ 33 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 34 to to ADP IN _ _ _ _ _ 35 tumor tumor NOUN NN Number=Sing _ _ _ _ 36 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 37 factor factor NOUN NN Number=Sing _ _ _ _ 38 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 9141 # text = ISG15-LTR-IFN hybrid gene inserted into the retrovirus vector was transduced into Jurkat and U937 cells. 1 ISG15 ISG15 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 IFN IFN PROPN NNP Number=Sing _ _ _ _ 6 hybrid hybrid NOUN NN Number=Sing _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 inserted insert VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 into into ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 retrovirus retrovirus NOUN NN Number=Sing _ _ _ _ 12 vector vector NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 transduced transduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 into into ADP IN _ _ _ _ _ 16 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 U937 U937 NUM CD NumType=Card _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 9142 # text = Selected transfected clones produced low levels of IFN A (IFNA) constitutively, and their abilities to express interleukin-2 and interleukin-2 receptor upon stimulation with phytohemagglutinin and phorbol myristate acetate were retained. 1 Selected select VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 clones clone NOUN NNS Number=Plur _ _ _ _ 4 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 low low ADJ JJ Degree=Pos _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 IFN IFN PROPN NNP Number=Sing _ _ _ _ 9 A a PROPN NNP Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 IFNA IFNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 constitutively constitutively ADV RB _ _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 17 abilities ability NOUN NNS Number=Plur _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 express express VERB VB VerbForm=Inf _ _ _ _ 20 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ _ 27 receptor receptor NOUN NN Number=Sing _ _ _ _ 28 upon upon ADP IN _ _ _ _ _ 29 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 phytohemagglutinin phytohemagglutinin NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 34 myristate myristate NOUN NN Number=Sing _ _ _ _ 35 acetate acetate NOUN NN Number=Sing _ _ _ _ 36 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 37 retained retain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 9143 # text = Enhancement of IFNA synthesis observed upon HIV-1 infection resulted in significant inhibition of HIV-1 replication for a period of at least 30 days. 1 Enhancement Enhancement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 IFNA IFNA PROPN NNP Number=Sing _ _ _ _ 4 synthesis synthesis PROPN NNP Number=Sing _ _ _ _ 5 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 upon upon ADP IN _ _ _ _ _ 7 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 infection infection NOUN NN Number=Sing _ _ _ _ 11 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 significant significant ADJ JJ Degree=Pos _ _ _ _ 14 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 replication replication NOUN NN Number=Sing _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 period period NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 at at ADV RB _ _ _ _ _ 25 least least ADV RBS Degree=Sup _ _ _ _ 26 30 30 NUM CD NumType=Card _ _ _ _ 27 days day NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 9144 # text = Virus isolated from IFNA-producing cells was able to replicate in the U937 cells but did not replicate efficiently in U937 cells transduced with the IFNA gene. 1 Virus virus PROPN NNP Number=Sing _ _ _ _ 2 isolated isolate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 IFNA IFNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 producing produce VERB VBG VerbForm=Ger _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 able able ADJ JJ Degree=Pos _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 replicate replicate VERB VB VerbForm=Inf _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 U937 U937 NOUN NN Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 not not PART RB _ _ _ _ _ 19 replicate replicate VERB VB VerbForm=Inf _ _ _ _ 20 efficiently efficiently ADV RB _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 U937 U937 NUM CD NumType=Card _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 transduced transduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 IFNA IFNA PROPN NNP Number=Sing _ _ _ _ 28 gene gene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 9145 # text = These results suggest that targeting IFN synthesis to HIV-1-infected cells is an attainable goal and that autocrine IFN synthesis results in a long-lasting and permanent suppression of HIV-1 replication. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 targeting targete VERB VBG VerbForm=Ger _ _ _ _ 6 IFN Ifn ADP RP _ _ _ _ _ 7 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 -infected -infect ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 attainable attainable ADJ JJ Degree=Pos _ _ _ _ 17 goal goal NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 20 autocrine autocrine NOUN NN Number=Sing _ _ _ _ 21 IFN Ifn ADP IN _ _ _ _ _ 22 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 23 results result NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 long long ADV RB Degree=Pos _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 lasting lasting ADJ JJ Degree=Pos _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 permanent permanent ADJ JJ Degree=Pos _ _ _ _ 31 suppression suppression NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ _ 36 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9146 # text = Document 0030011711 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011711 0030011711 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9147 # text = Expression levels of the thyrotropin receptor gene in autoimmune thyroid disease: coregulation with parameters of thyroid function and inverse relation to major histocompatibility complex classes I and II. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 thyrotropin thyrotropin NOUN NN Number=Sing _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 autoimmune autoimmune ADJ JJ Degree=Pos _ _ _ _ 10 thyroid thyroid NOUN NN Number=Sing _ _ _ _ 11 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 : : PUNCT : _ _ _ _ _ 13 coregulation coregulation NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 parameters parameter NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 thyroid thyroid NOUN NN Number=Sing _ _ _ _ 18 function function NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 inverse inverse NOUN NN Number=Sing _ _ _ _ 21 relation relation NOUN NN Number=Sing _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 major major ADJ JJ Degree=Pos _ _ _ _ 24 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 25 complex complex NOUN NN Number=Sing _ _ _ _ 26 classes class NOUN NNS Number=Plur _ _ _ _ 27 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 II II PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9148 # text = Using a human TSH receptor (TSH-R) cDNA probe, we investigated TSH-R transcript levels in 13 human thyroid fragments by Northern blot analysis; 7 Graves' disease, 2 Hashimoto's disease, 3 endemic goiter, and 1 healthy thyroid gland were studied. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 TSH TSh NOUN NN Number=Sing _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 TSH TSH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 R R PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 12 probe probe NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 15 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 TSH TSH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 R R PROPN NNP Number=Sing _ _ _ _ 19 transcript transcript NOUN NN Number=Sing _ _ _ _ 20 levels level NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 13 13 NUM CD NumType=Card _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 thyroid thyroid NOUN NN Number=Sing _ _ _ _ 25 fragments fragment NOUN NNS Number=Plur _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 28 blot blot NOUN NN Number=Sing _ _ _ _ 29 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ; ; PUNCT , _ _ _ _ _ 31 7 7 NUM CD NumType=Card _ _ _ _ 32 Graves Grave NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 ' 's PART POS _ _ _ _ _ 34 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 2 2 NUM CD NumType=Card _ _ _ _ 37 Hashimoto Hashimoto PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 's 's PART POS _ _ _ _ _ 39 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 3 3 NUM CD NumType=Card _ _ _ _ 42 endemic endemic ADJ JJ Degree=Pos _ _ _ _ 43 goiter goiter NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 1 1 NUM CD NumType=Card _ _ _ _ 47 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 48 thyroid thyroid NOUN NN Number=Sing _ _ _ _ 49 gland gland NOUN NN Number=Sing _ _ _ _ 50 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 51 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 9149 # text = TSH-R expression levels were variable, but displayed a close correlation to the expression of thyroid peroxidase (r = 0.703; P < 0.05), thyroglobulin (r = 0.817; P < 0.01), and the nuclear oncogene c-fos (r = 0.935; P < 0.001), but not c-myc. 1 TSH Tsh INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 R r VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 levels level NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 variable variable ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 displayed display VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 close close ADJ JJ Degree=Pos _ _ _ _ 13 correlation correlation NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 thyroid thyroid NOUN NN Number=Sing _ _ _ _ 19 peroxidase peroxidase NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 r r NOUN NN Number=Sing _ _ _ _ 22 = = SYM SYM _ _ _ _ _ 23 0.703 0.703 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 ; ; PUNCT , _ _ _ _ _ 25 P P NOUN NN Number=Sing _ _ _ _ 26 < < PUNCT -LRB- _ _ _ _ _ 27 0.05 0.05 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 thyroglobulin thyroglobulin NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 r r NOUN NN Number=Sing _ _ _ _ 33 = = SYM SYM _ _ _ _ _ 34 0.817 0.817 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 ; ; PUNCT , _ _ _ _ _ 36 P P NOUN NN Number=Sing _ _ _ _ 37 < < PUNCT -LRB- _ _ _ _ _ 38 0.01 0.01 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 44 oncogene oncogene NOUN NN Number=Sing _ _ _ _ 45 c- c- PUNCT : _ _ _ _ SpaceAfter=No 46 fos fo NOUN NNS Number=Plur _ _ _ _ 47 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 48 r r NOUN NN Number=Sing _ _ _ _ 49 = = SYM SYM _ _ _ _ _ 50 0.935 0.935 NUM CD NumType=Card _ _ _ SpaceAfter=No 51 ; ; PUNCT , _ _ _ _ _ 52 P p NOUN NN Number=Sing _ _ _ _ 53 < < PUNCT -LRB- _ _ _ _ _ 54 0.001 0.001 NUM CD NumType=Card _ _ _ SpaceAfter=No 55 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 56 , , PUNCT , _ _ _ _ _ 57 but but CCONJ CC _ _ _ _ _ 58 not not ADV RB _ _ _ _ _ 59 c- c- SYM NFP _ _ _ _ SpaceAfter=No 60 myc. myc. NOUN NN Number=Sing _ _ _ _ # sent_id = 9150 # text = Overall, TSH-R transcript levels were low or absent in those thyroids in which expression of the major histocompatibility complex class I or II (MHC I or II) was high, thus establishing an inverse relation (MHC I, r = -0.791; P < 0.01; MHC II, r = -0.784; P < 0.01). 1 Overall overall ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 TSH TSH X GW _ _ _ _ SpaceAfter=No 4 - - X GW _ _ _ _ SpaceAfter=No 5 R be X GW _ _ _ _ _ 6 transcript transcript ADJ JJ Degree=Pos _ _ _ _ 7 levels level NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 low low ADJ JJ Degree=Pos _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 absent absent VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 those those DET DT Number=Plur|PronType=Dem _ _ _ _ 14 thyroids thyroid NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 major major ADJ JJ Degree=Pos _ _ _ _ 21 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 22 complex complex NOUN NN Number=Sing _ _ _ _ 23 class class NOUN NN Number=Sing _ _ _ _ 24 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 II ii PROPN NNP Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 MHC MHC PROPN NNP Number=Sing _ _ _ _ 29 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 II ii PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 34 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 thus thus ADV RB _ _ _ _ _ 37 establishing establish VERB VBG VerbForm=Ger _ _ _ _ 38 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 inverse inverse ADJ JJ Degree=Pos _ _ _ _ 40 relation relation NOUN NN Number=Sing _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 MHC MHC PROPN NNP Number=Sing _ _ _ _ 43 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 r be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 46 = = SYM SYM _ _ _ _ _ 47 - - SYM SYM _ _ _ _ SpaceAfter=No 48 0.791 0.791 NUM CD NumType=Card _ _ _ SpaceAfter=No 49 ; ; PUNCT , _ _ _ _ _ 50 P P NOUN NN Number=Sing _ _ _ _ 51 < < PUNCT -LRB- _ _ _ _ _ 52 0.01 0.01 NUM CD NumType=Card _ _ _ SpaceAfter=No 53 ; ; PUNCT , _ _ _ _ _ 54 MHC MHC PROPN NNP Number=Sing _ _ _ _ 55 II II PROPN NNP Number=Sing _ _ _ SpaceAfter=No 56 , , PUNCT , _ _ _ _ _ 57 r be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 58 = = SYM SYM _ _ _ _ _ 59 -0.784 -0.784 NUM CD NumType=Card _ _ _ SpaceAfter=No 60 ; ; PUNCT , _ _ _ _ _ 61 P P NOUN NN Number=Sing _ _ _ _ 62 < < PUNCT -LRB- _ _ _ _ _ 63 0.01 0.01 NUM CD NumType=Card _ _ _ SpaceAfter=No 64 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 65 . . PUNCT . _ _ _ _ _ # sent_id = 9151 # text = In situ hybridization showed that apart from lymphocytes, thyroid cells themselves were the source of MHC II transcripts. 1 In in ADP IN _ _ _ _ _ 2 situ situ NOUN NN Number=Sing _ _ _ _ 3 hybridization hybridization NOUN NN Number=Sing _ _ _ _ 4 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 apart apart NOUN NN Number=Sing _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 thyroid thyroid NOUN NN Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 themselves themselves PRON PRP Case=Acc|Number=Plur|Person=1|PronType=Prs|Reflex=Yes _ _ _ _ 13 were be VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 source source NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 MHC MHC PROPN NNPS Number=Plur _ _ _ _ 18 II ii NUM CD NumType=Card _ _ _ _ 19 transcripts transcript NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 9152 # text = gamma-Interferon expression was only detectable in 1 Hashimoto's goiter. 1 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 Interferon Interferon PROPN NNP Number=Sing _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 only only ADV RB _ _ _ _ _ 7 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 1 1 NUM CD NumType=Card _ _ _ _ 10 Hashimoto Hashimoto PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 's 's PART POS _ _ _ _ _ 12 goiter goiter NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 9153 # text = Our findings suggest that next to lymphocyte infiltration, active regulatory events in the thyrocyte are responsible for the inverse relation between functional parameters (TSH-R, thyroid peroxidase, thyroglobulin, and c-fos) and immunological markers (MHC I and II). 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 next next ADJ JJ Degree=Pos _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 lymphocyte lymphocyte VERB VB VerbForm=Inf _ _ _ _ 8 infiltration infiltration NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 active active ADJ JJ Degree=Pos _ _ _ _ 11 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 12 events event NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 thyrocyte thyrocyte NOUN NN Number=Sing _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 inverse inverse ADJ JJ Degree=Pos _ _ _ _ 21 relation relation NOUN NN Number=Sing _ _ _ _ 22 between between ADP IN _ _ _ _ _ 23 functional functional ADJ JJ Degree=Pos _ _ _ _ 24 parameters parameter NOUN NNS Number=Plur _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 TSH TSh NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 R r NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 thyroid thyroid NOUN NN Number=Sing _ _ _ _ 31 peroxidase peroxidase NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 thyroglobulin thyroglobulin NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 c- c- SYM SYM _ _ _ _ SpaceAfter=No 37 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 immunological immunological ADJ JJ Degree=Pos _ _ _ _ 41 markers marker NOUN NNS Number=Plur _ _ _ _ 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 MHC MHC PROPN NNP Number=Sing _ _ _ _ 44 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 47 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9154 # text = Document 0030011714 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011714 0030011714 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9155 # text = An in vitro globin gene switching model based on differentiated embryonic stem cells. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 4 globin globin NOUN NN Number=Sing _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 switching switch VERB VBG VerbForm=Ger _ _ _ _ 7 model model NOUN NN Number=Sing _ _ _ _ 8 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 embryonic embryonic ADJ JJ Degree=Pos _ _ _ _ 12 stem stem NOUN NN Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9156 # text = We used mouse embryonic stem (ES) cells to study globin gene expression and switching in vitro. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 mouse mouse NOUN NN Number=Sing _ _ _ _ 4 embryonic embryonic ADJ JJ Degree=Pos _ _ _ _ 5 stem stem NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 ES ES NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 study study VERB VB VerbForm=Inf _ _ _ _ 12 globin globin ADP IN _ _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 switching switch VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 9157 # text = We show that ES-derived embryoid bodies express the full complement of mouse embryonic globin genes in the correct temporal order and that on further differentiation, a switch occurs to the fetal/adult genes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 ES ES PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 embryoid embryoid ADJ JJ Degree=Pos _ _ _ _ 8 bodies body NOUN NNS Number=Plur _ _ _ _ 9 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 full full ADJ JJ Degree=Pos _ _ _ _ 12 complement complement NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 mouse mouse NOUN NN Number=Sing _ _ _ _ 15 embryonic embryonic ADJ JJ Degree=Pos _ _ _ _ 16 globin globin NOUN NN Number=Sing _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 correct correct ADJ JJ Degree=Pos _ _ _ _ 21 temporal temporal ADJ JJ Degree=Pos _ _ _ _ 22 order order NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 further further ADJ JJ Degree=Pos _ _ _ _ 27 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 switch switch NOUN NN Number=Sing _ _ _ _ 31 occurs occur NOUN NNS Number=Plur _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 fetal fetal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 35 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 36 adult adult NOUN NN Number=Sing _ _ _ _ 37 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 9158 # text = In addition, the erythroid-specific transcription factor NF-E1 was shown to be expressed coordinately with that of globin in embryoid bodies. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 E1 E1 PROPN NNP Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 be be AUX VB VerbForm=Inf _ _ _ _ 17 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 coordinately coordinately ADV RB _ _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 globin globin NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 embryoid embryoid ADJ JJ Degree=Pos _ _ _ _ 25 bodies body NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 9159 # text = We conclude from these experiments that the ES cell system provides a good model to study hematopoietic development. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 experiments experiment NOUN NNS Number=Plur _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 ES ES ADJ JJ Degree=Pos _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 system system NOUN NN Number=Sing _ _ _ _ 11 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 good good ADJ JJ Degree=Pos _ _ _ _ 14 model model NOUN NN Number=Sing _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 study study VERB VB VerbForm=Inf _ _ _ _ 17 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 18 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 9160 # text = When the human epsilon- or beta-globin genes driven by the dominant control region (DCR) are introduced into this system, the human epsilon-globin gene, in contrast to the beta-globin gene, is not deregulated by the presence of the DCR and is expressed strictly as an embryonic gene. 1 When when ADV WRB PronType=Int _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 epsilon epsilon NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 globin globin NOUN NN Number=Sing _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ _ 11 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 15 control control NOUN NN Number=Sing _ _ _ _ 16 region region NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 DCR Dcr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 introduced introduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 into into ADP IN _ _ _ _ _ 23 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 24 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 human human ADJ JJ Degree=Pos _ _ _ _ 28 epsilon epsilon NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 globin globin NOUN NN Number=Sing _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 contrast contrast NOUN NN Number=Sing _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 globin globin NOUN NN Number=Sing _ _ _ _ 40 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 43 not not PART RB _ _ _ _ _ 44 deregulated deregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 45 by by ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 presence presence NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 DCR DCR PROPN NNP Number=Sing _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 53 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 54 strictly strictly ADV RB _ _ _ _ _ 55 as as ADP IN _ _ _ _ _ 56 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 57 embryonic embryonic ADJ JJ Degree=Pos _ _ _ _ 58 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 9161 # text = We conclude from this that the epsilon-globin gene is not regulated by competition with other genes in the human beta-globin locus. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 epsilon epsilon NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 globin globin NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 competition competition NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 other other ADJ JJ Degree=Pos _ _ _ _ 18 genes gene NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 globin globin NOUN NN Number=Sing _ _ _ _ 25 locus locus NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9162 # text = Document 0030011715 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011715 0030011715 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9163 # text = Expression of LAZ3/BCL6 in follicular center (FC) B cells of reactive lymph nodes and FC-derived non-Hodgkin lymphomas. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 LAZ3/BCL6 LAZ3/BCL6 NUM CD NumType=Card _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 follicular follicular ADJ JJ Degree=Pos _ _ _ _ 6 center center NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 FC FC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 B b ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 14 lymph lymph NOUN NN Number=Sing _ _ _ _ 15 nodes node NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 FC FC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 derived derive VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 non-Hodgkin non-hodgkin ADJ JJ Degree=Pos _ _ _ _ 21 lymphomas lymphoma NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9164 # text = Chromosomal translocation resulting in abnormal expression of the LAZ3/BCL6 gene in B cells has been implicated in the tumorigenesis of non-Hodgkin lymphoma (NHL). 1 Chromosomal Chromosomal ADJ JJ Degree=Pos _ _ _ _ 2 translocation translocation NOUN NN Number=Sing _ _ _ _ 3 resulting result VERB VBG VerbForm=Ger _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 abnormal abnormal ADJ JJ Degree=Pos _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 LAZ LAZ PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 BCL6 BCL6 NUM CD NumType=Card _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 B b ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 19 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 tumorigenesis tumorigenesis NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 non-Hodgkin non-hodgkin ADJ JJ Degree=Pos _ _ _ _ 25 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 NHL NHL INTJ UH _ _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 9165 # text = Therefore we studied the expression pattern of LAZ3/BCL6 by in situ hybridization with synthetic oligonucleotide probes in frozen tissue sections from five reactive lymph nodes and 38 B cell and non-B NHL. 1 Therefore therefore ADV RB _ _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 pattern pattern NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 LAZ LAZ PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 BCL6 BCL6 NUM CD NumType=Card _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 situ situ NOUN NN Number=Sing _ _ _ _ 15 hybridization hybridization NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 18 oligonucleotide oligonucleotide ADJ JJ Degree=Pos _ _ _ _ 19 probes probe NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 frozen frozen VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 tissue tissue NOUN NN Number=Sing _ _ _ _ 23 sections section NOUN NNS Number=Plur _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 five five NUM CD NumType=Card _ _ _ _ 26 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 27 lymph lymph NOUN NN Number=Sing _ _ _ _ 28 nodes node NOUN NNS Number=Plur _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 38 38 NUM CD NumType=Card _ _ _ _ 31 B b NOUN NN Number=Sing _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 non non X AFX _ _ _ _ SpaceAfter=No 35 -B -b PROPN NNP Number=Sing _ _ _ _ 36 NHL Nhl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 9166 # text = In addition, we investigated the expression of LAZ3/BCL6 by Northern blot analysis on multiple human tissues. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 LAZ LAZ PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 BCL6 BCL6 NUM CD NumType=Card _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 15 blot blot NOUN NN Number=Sing _ _ _ _ 16 analysis analysis NOUN NN Number=Sing _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 9167 # text = The LAZ3/BCL6 transcript was found in a variety of tissues, including skeletal muscle, peripheral blood leukocytes, and weakly in normal lymph nodes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 LAZ LAZ NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 / / PUNCT , _ _ _ _ SpaceAfter=No 5 BCL6 BCL6 NUM CD NumType=Card _ _ _ _ 6 transcript transcript NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 variety variety NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 including include VERB VBG VerbForm=Ger _ _ _ _ 16 skeletal skeletal ADJ JJ Degree=Pos _ _ _ _ 17 muscle muscle NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 20 blood blood NOUN NN Number=Sing _ _ _ _ 21 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 weakly weakly ADV RB _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 normal normal ADJ JJ Degree=Pos _ _ _ _ 27 lymph lymph NOUN NN Number=Sing _ _ _ _ 28 nodes node NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 9168 # text = In the tumor samples, expression of LAZ3/BCL6 was observed in 68% of all B cell NHL and none of the non-B lymphomas. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 tumor tumor NOUN NN Number=Sing _ _ _ _ 4 samples sample NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 LAZ LAZ PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 BCL6 Bcl6 NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 68 68 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 % % SYM NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 all all DET DT _ _ _ _ _ 19 B b ADJ JJ Degree=Pos _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 NHL Nhl NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 none none NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 non non X AFX _ _ _ _ SpaceAfter=No 27 -B -b ADJ JJ Degree=Pos _ _ _ _ 28 lymphomas lymphoma NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 9169 # text = All cases of follicular, mixed small and large cell lymphomas showed LAZ3/BCL6 expression confined to the neoplastic follicles. 1 All all DET DT _ _ _ _ _ 2 cases case NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 follicular follicular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 mixed mixed ADJ JJ Degree=Pos _ _ _ _ 7 small small ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 large large ADJ JJ Degree=Pos _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 lymphomas lymphoma NOUN NNS Number=Plur _ _ _ _ 12 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 LAZ LAZ PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 BCL6 BCL6 NUM CD NumType=Card _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 confined confine VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 neoplastic neoplastic ADJ JJ Degree=Pos _ _ _ _ 22 follicles follicle NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 9170 # text = A follicular expression pattern was also found in all non-malignant reactive lymph nodes. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 follicular follicular ADJ JJ Degree=Pos _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 pattern pattern NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 all all DET DT _ _ _ _ _ 10 non-malignant non-malignant ADJ JJ Degree=Pos _ _ _ _ 11 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 12 lymph lymph NOUN NN Number=Sing _ _ _ _ 13 nodes node NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 9171 # text = Hence, the expression of LAZ3/BCL6 does not correlate to malignancy, but reflects the origin of B cells from the germinal centers. 1 Hence hence ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 LAZ LAZ PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 BCL6 BCL6 NOUN NN Number=Sing _ _ _ _ 10 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 correlate correlate VERB VB VerbForm=Inf _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 malignancy malignancy VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 reflects reflect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 origin origin NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 B b ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 germinal germinal ADJ JJ Degree=Pos _ _ _ _ 26 centers center NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9172 # text = Document 0030011725 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011725 0030011725 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9173 # text = Protein kinase C-zeta mediates NF-kappa B activation in human immunodeficiency virus-infected monocytes. 1 Protein protein NOUN NN Number=Sing _ _ _ _ 2 kinase kinase NOUN NN Number=Sing _ _ _ _ 3 C- C- NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 zeta zeta NOUN NN Number=Sing _ _ _ _ 5 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 14 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 -infected -infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9174 # text = The molecular mechanisms regulating human immunodeficiency virus (HIV) persistence in a major cell reservoir such as the macrophage remain unknown. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 3 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 4 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 7 virus virus NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 persistence persistence NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 major major ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 reservoir reservoir NOUN NN Number=Sing _ _ _ _ 17 such such ADJ JJ Degree=Pos _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 21 remain remain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 9175 # text = NF-kappa B is a transcription factor involved in the regulation of the HIV long terminal repeat and is selectively activated following HIV infection of human macrophages. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 regulation regulation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 HIV HIV PROPN NNP Number=Sing _ _ _ _ 16 long long ADJ JJ Degree=Pos _ _ _ _ 17 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 18 repeat repeat NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 selectively selectively ADV RB _ _ _ _ _ 22 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 following follow VERB VBG VerbForm=Ger _ _ _ _ 24 HIV Hiv PROPN NNP Number=Sing _ _ _ _ 25 infection infection NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 human human ADJ JJ Degree=Pos _ _ _ _ 28 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 9176 # text = Although little information as to what signal transduction pathways mediate NF-kappa B activation in monocytes-macrophages is available, our previous work indicated that classical protein kinase C (PKC) isoenzymes were not involved in the HIV-mediated NF-kappa B activation. 1 Although although SCONJ IN _ _ _ _ _ 2 little little ADJ JJ Degree=Pos _ _ _ _ 3 information information NOUN NN Number=Sing _ _ _ _ 4 as as SCONJ IN _ _ _ _ _ 5 to to SCONJ IN _ _ _ _ _ 6 what what PRON WP PronType=Int _ _ _ _ 7 signal signal VERB VB VerbForm=Inf _ _ _ _ 8 transduction transduction NOUN NN Number=Sing _ _ _ _ 9 pathways pathway NOUN NNS Number=Plur _ _ _ _ 10 mediate mediate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 available available ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 24 previous previous ADJ JJ Degree=Pos _ _ _ _ 25 work work NOUN NN Number=Sing _ _ _ _ 26 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 that that SCONJ IN _ _ _ _ _ 28 classical classical ADJ JJ Degree=Pos _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ _ 30 kinase kinase NOUN NN Number=Sing _ _ _ _ 31 C C PROPN NNP Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 isoenzymes isoenzyme NOUN NNS Number=Plur _ _ _ _ 36 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 37 not not PART RB _ _ _ _ _ 38 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 HIV- Hiv- NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 kappa kappa NOUN NN Number=Sing _ _ _ _ 46 B b NOUN NN Number=Sing _ _ _ _ 47 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 9177 # text = In this study, we have focused on atypical PKC isoenzymes. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 focused focus VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 atypical atypical ADJ JJ Degree=Pos _ _ _ _ 10 PKC Pkc NOUN NN Number=Sing _ _ _ _ 11 isoenzymes isoenzyme NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 9178 # text = PKC-zeta belongs to this family and is known to be an important step in NF-kappa B activation in other cell systems. 1 PKC Pkc NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 zeta zeta NOUN NN Number=Sing _ _ _ _ 4 belongs belong VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 family family NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 important important ADJ JJ Degree=Pos _ _ _ _ 15 step step NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 kappa kappa PROPN NNP Number=Sing _ _ _ _ 20 B b PROPN NNP Number=Sing _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 other other ADJ JJ Degree=Pos _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 systems system NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 9179 # text = Immunoblotting experiments with U937 cells demonstrate that PKC-zeta is present in these cells, and its expression can be downmodulated by antisense oligonucleotides (AO). 1 Immunoblotting Immunoblott VERB VBG VerbForm=Ger _ _ _ _ 2 experiments experiment NOUN NNS Number=Plur _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 U937 U937 NUM CD NumType=Card _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 PKC Pkc NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 zeta zeta NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 present present ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 can can AUX MD VerbForm=Fin _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 downmodulated downmodulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 antisense antisense ADJ JJ Degree=Pos _ _ _ _ 25 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 AO AO INTJ UH _ _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 9180 # text = The HIV-mediated NF-kappa B activation is selectively reduced by AO to PKC-zeta. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 HIV- Hiv- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 selectively selectively ADV RB _ _ _ _ _ 11 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 AO AO PROPN NNP Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 zeta zeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 9181 # text = In addition, cotransfection of a negative dominant molecule of PKC-zeta (PKC-zeta mut) with NF-kappa B-dependent reporter genes selectively inhibits the HIV- but not phorbol myristate acetate- or lipopolysaccharide-mediated activation of NF-kappa B. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 cotransfection cotransfection NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 negative negative ADJ JJ Degree=Pos _ _ _ _ 8 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 9 molecule molecule NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 PKC PKC NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 zeta zeta NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 PKC Pkc NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 zeta zeta NOUN NN Number=Sing _ _ _ _ 18 mut mut NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa PROPN NNP Number=Sing _ _ _ _ 24 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 27 reporter reporter NOUN NN Number=Sing _ _ _ _ 28 genes gene NOUN NNS Number=Plur _ _ _ _ 29 selectively selectively ADV RB _ _ _ _ _ 30 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ _ 34 but but CCONJ CC _ _ _ _ _ 35 not not ADV RB _ _ _ _ _ 36 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 37 myristate myristate NOUN NN Number=Sing _ _ _ _ 38 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT , _ _ _ _ _ 40 or or CCONJ CC _ _ _ _ _ 41 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 activation activation NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 kappa kappa PROPN NNP Number=Sing _ _ _ _ 49 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 9182 # text = That PKC-zeta is specific in regulating NF-kappa B is concluded from the inability of PKC-zeta(mut) to interfere with the basal or phorbol myristate acetate-inducible CREB- or AP1-dependent transcriptional activity. 1 That that DET DT Number=Sing|PronType=Dem _ _ _ _ 2 PKC Pkc NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 zeta zeta NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 specific specific ADJ JJ Degree=Pos _ _ _ _ 7 in in SCONJ IN _ _ _ _ _ 8 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa PROPN NNP Number=Sing _ _ _ _ 12 B b PROPN NNP Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 concluded conclude VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 inability inability NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 PKC-zeta PKC-zeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 mut mut NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 interfere interfere VERB VB VerbForm=Inf _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 basal basal NOUN NN Number=Sing _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 30 myristate myristate NOUN NN Number=Sing _ _ _ _ 31 acetate acetate VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 32 -inducible -inducible ADJ JJ Degree=Pos _ _ _ _ 33 CREB Creb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT , _ _ _ _ _ 35 or or CCONJ CC _ _ _ _ _ 36 AP1 Ap1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 39 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 40 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 9183 # text = Lastly, we demonstrate a selective inhibition of p24 production by HIV-infected human macrophages when treated with AO to PKC-zeta. 1 Lastly Lastly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 selective selective ADJ JJ Degree=Pos _ _ _ _ 7 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 p24 p24 NUM CD NumType=Card _ _ _ _ 10 production production NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 HIV- HIV- X GW _ _ _ _ SpaceAfter=No 13 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 16 when when ADV WRB PronType=Int _ _ _ _ 17 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 AO AO PROPN NNP Number=Sing _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 zeta zeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 9184 # text = Altogether, these results suggest that atypical PKC isoenzymes, including PKC-zeta, participate in the signal transduction pathways by which HIV infection results in the activation of NF-kappa B in human monocytic cells and macrophages. 1 Altogether altogether ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 atypical atypical ADJ JJ Degree=Pos _ _ _ _ 8 PKC Pkc NOUN NN Number=Sing _ _ _ _ 9 isoenzymes isoenzyme NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 including include VERB VBG VerbForm=Ger _ _ _ _ 12 PKC Pkc NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 zeta zeta NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 participate participate VERB VB VerbForm=Inf _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 signal signal NOUN NN Number=Sing _ _ _ _ 20 transduction transduction NOUN NN Number=Sing _ _ _ _ 21 pathways pathways NOUN NNS Number=Plur _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 HIV Hiv AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 infection infection NOUN NN Number=Sing _ _ _ _ 26 results result NOUN NNS Number=Plur _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappa kappa NOUN NN Number=Sing _ _ _ _ 34 B b NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 human human ADJ JJ Degree=Pos _ _ _ _ 37 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9185 # text = Document 0030011727 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011727 0030011727 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9186 # text = Regulation of I kappa B alpha and p105 in monocytes and macrophages persistently infected with human immunodeficiency virus. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 4 kappa kappa X FW Foreign=Yes _ _ _ _ 5 B B ADJ JJ Degree=Pos _ _ _ _ 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 p105 p105 NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 13 persistently persistently ADV RB _ _ _ _ _ 14 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 18 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9187 # text = The mechanisms regulating human immunodeficiency virus (HIV) persistence in human monocytes/macrophages are partially understood. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 3 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 persistence persistence NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 partially partially ADV RB _ _ _ _ _ 18 understood understand VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 9188 # text = Persistent HIV infection of U937 monocytic cells results in NF-kappa B activation. 1 Persistent persistent ADJ JJ Degree=Pos _ _ _ _ 2 HIV HIV NOUN NN Number=Sing _ _ _ _ 3 infection infection NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 U937 U937 NUM CD NumType=Card _ _ _ _ 6 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 results result NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 9189 # text = Whether virus-induced NF-kappa B activation is a mechanism that favors continuous viral replication in macrophages remains unknown. 1 Whether whether SCONJ IN _ _ _ _ _ 2 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 favors favor VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 continuous continuous ADJ JJ Degree=Pos _ _ _ _ 16 viral viral ADJ JJ Degree=Pos _ _ _ _ 17 replication replication NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 20 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 9190 # text = To further delineate the molecular mechanisms involved in the activation of NF-kappa B in HIV-infected monocytes and macrophages, we have focused on the regulation of the I kappa B molecules. 1 To to PART TO _ _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 delineate delineate VERB VB VerbForm=Inf _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 6 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 7 involved involved ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 HIV- HIV- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 24 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 focused focus VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 regulation regulation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 32 kappa kappa X FW Foreign=Yes _ _ _ _ 33 B b ADJ JJ Degree=Pos _ _ _ _ 34 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 9191 # text = First, we show that persistent HIV infection results in the activation of NF-kappa 1 First first ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 persistent persistent ADJ JJ Degree=Pos _ _ _ _ 7 HIV Hiv NOUN NN Number=Sing _ _ _ _ 8 infection infection NOUN NN Number=Sing _ _ _ _ 9 results result NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa PROPN NNP Number=Sing _ _ _ _ # sent_id = 9192 # text = B not only in monocytic cells but also in macrophages. 1 B b VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 not not ADV RB _ _ _ _ _ 3 only only ADV RB _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 but but CCONJ CC _ _ _ _ _ 8 also also ADV RB _ _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 9193 # text = In HIV-infected cells, I kappa B alpha protein levels are decreased secondary to enhanced protein degradation. 1 In in ADP IN _ _ _ _ _ 2 HIV- HIV- PUNCT : _ _ _ _ SpaceAfter=No 3 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B b PROPN NNP Number=Sing _ _ _ _ 9 alpha alpha NOUN NN Number=Sing _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 secondary secondary ADJ JJ Degree=Pos _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 9194 # text = This parallels the increased I kappa B alpha synthesis secondary to increased I kappa B alpha gene transcription, i.e., increased RNA and transcriptional activity of its promoter-enhancer. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 parallels parallel VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B b PROPN NNP Number=Sing _ _ _ _ 8 alpha alpha ADV RB _ _ _ _ _ 9 synthesis synthesis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 secondary secondary ADJ JJ Degree=Pos _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 14 kappa kappa X FW Foreign=Yes _ _ _ _ 15 B b ADJ JJ Degree=Pos _ _ _ _ 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 i.e. i.e. X FW _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 RNA RNA PROPN NNP Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 26 activity activity NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 9195 # text = Another protein with I kappa B function, p105, is also modified in HIV-infected cells: p105 and p50 steady-state protein levels are increased as a result of increased synthesis and proteolytic processing of p105. 1 Another another DET DT _ _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B b PROPN NNP Number=Sing _ _ _ _ 7 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 p105 p105 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 also also ADV RB _ _ _ _ _ 13 modified modify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 HIV- HIV- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 : : PUNCT : _ _ _ _ _ 19 p105 p105 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 p50 p50 NUM CD NumType=Card _ _ _ _ 22 steady steady ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 state state NOUN NN Number=Sing _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ _ 26 levels level NOUN NNS Number=Plur _ _ _ _ 27 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 as as ADP IN _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 result result NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 proteolytic proteolytic ADJ JJ Degree=Pos _ _ _ _ 37 processing processing NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 p105 p105 NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 9196 # text = Transcriptional activity of p105 is also increased in infected cells and is also mediated by NF-kappa B through a specific kappa B motif. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 activity activity NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p105 p105 NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 also also ADV RB _ _ _ _ _ 14 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ _ 20 through through ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 specific specific ADJ JJ Degree=Pos _ _ _ _ 23 kappa kappa NOUN NN Number=Sing _ _ _ _ 24 B b NOUN NN Number=Sing _ _ _ _ 25 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 9197 # text = These results demonstrate the existence of a triple autoregulatory loop in monocytes and macrophages involving HIV, p105 and p50, and MAD3, with the end result of persistent NF-kappa B activation and viral persistence. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 existence existence NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 triple triple ADJ JJ Degree=Pos _ _ _ _ 9 autoregulatory autoregulatory ADJ JJ Degree=Pos _ _ _ _ 10 loop loop NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 15 involving involve VERB VBG VerbForm=Ger _ _ _ _ 16 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 p105 p105 NUM CD NumType=Card _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 MAD3 MAD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 end end NOUN NN Number=Sing _ _ _ _ 28 result result NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 persistent persistent ADJ JJ Degree=Pos _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappa kappa NOUN NN Number=Sing _ _ _ _ 34 B b NOUN NN Number=Sing _ _ _ _ 35 activation activation NOUN NN Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 viral viral ADJ JJ Degree=Pos _ _ _ _ 38 persistence persistence NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 9198 # text = Furthermore, persistent HIV infection of monocytes and macrophages provides a useful model with which to study concomitant modifications of different I kappa B molecules. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 persistent persistent ADJ JJ Degree=Pos _ _ _ _ 4 HIV Hiv NOUN NN Number=Sing _ _ _ _ 5 infection infection NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 10 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 useful useful ADJ JJ Degree=Pos _ _ _ _ 13 model model NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 study study VERB VB VerbForm=Inf _ _ _ _ 18 concomitant concomitant ADJ JJ Degree=Pos _ _ _ _ 19 modifications modification NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 different different ADJ JJ Degree=Pos _ _ _ _ 22 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 23 kappa kappa X FW Foreign=Yes _ _ _ _ 24 B b ADJ JJ Degree=Pos _ _ _ _ 25 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9199 # text = Document 0030011731 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011731 0030011731 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9200 # text = Characterization of 5' end of human thromboxane receptor gene. 1 Characterization Characterization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 ' ' PUNCT `` _ _ _ _ _ 5 end end NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 thromboxane thromboxane NOUN NN Number=Sing _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 9201 # text = Organizational analysis and mapping of protein kinase C--responsive elements regulating expression in platelets. 1 Organizational organizational ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 mapping mapping NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 -- -- PUNCT , _ _ _ _ SpaceAfter=No 10 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 11 elements element NOUN NNS Number=Plur _ _ _ _ 12 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 platelets platelet NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9202 # text = Platelet thromboxane receptors are acutely and reversibly upregulated after acute myocardial infarction. 1 Platelet Platelet VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 thromboxane thromboxane PRON PRP _ _ _ _ _ 3 receptors receptor NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 acutely acutely ADV RB _ _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 reversibly reversibly ADV RB _ _ _ _ _ 8 upregulated upregulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 after after ADP IN _ _ _ _ _ 10 acute acute ADJ JJ Degree=Pos _ _ _ _ 11 myocardial myocardial ADJ JJ Degree=Pos _ _ _ _ 12 infarction infarction NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 9203 # text = To determine if platelet thromboxane receptors are under transcriptional control, we isolated and characterized human genomic DNA clones containing the 5' flanking region of the thromboxane receptor gene. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 if if SCONJ IN _ _ _ _ _ 4 platelet platelet NOUN NN Number=Sing _ _ _ _ 5 thromboxane thromboxane NOUN NN Number=Sing _ _ _ _ 6 receptors receptor NOUN NNS Number=Plur _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 under under ADP IN _ _ _ _ _ 9 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 10 control control NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 13 isolated isolate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 characterized characterize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 18 DNA dna NOUN NN Number=Sing _ _ _ _ 19 clones clone NOUN NNS Number=Plur _ _ _ _ 20 containing contain VERB VBG VerbForm=Ger _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ' ' PUNCT `` _ _ _ _ _ 24 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 25 region region NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 thromboxane thromboxane NOUN NN Number=Sing _ _ _ _ 29 receptor receptor NOUN NN Number=Sing _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 9204 # text = The exon-intron structure of the 5' portion of the thromboxane receptor gene was determined initially by comparing the nucleotide sequence of the 5' flanking genomic clone with that of a novel human uterine thromboxane receptor cDNA that extended the mRNA 141 bp further upstream than the previously identified human placental cDNA. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 exon exon NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 intron intron NOUN NN Number=Sing _ _ _ _ 5 structure structure NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ' 's PUNCT `` _ _ _ _ _ 10 portion portion NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 thromboxane thromboxane ADJ JJ Degree=Pos _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 initially initially ADV RB _ _ _ _ _ 19 by by SCONJ IN _ _ _ _ _ 20 comparing compare VERB VBG VerbForm=Ger _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 nucleotide nucleotide ADJ JJ Degree=Pos _ _ _ _ 23 sequence sequence NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ' ' PUNCT `` _ _ _ _ _ 28 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 29 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 30 clone clone NOUN NN Number=Sing _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 novel novel NOUN NN Number=Sing _ _ _ _ 36 human human ADJ JJ Degree=Pos _ _ _ _ 37 uterine uterine NOUN NN Number=Sing _ _ _ _ 38 thromboxane thromboxane NOUN NN Number=Sing _ _ _ _ 39 receptor receptor NOUN NN Number=Sing _ _ _ _ 40 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 41 that that PRON WDT PronType=Rel _ _ _ _ 42 extended extend VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 45 141 141 NUM CD NumType=Card _ _ _ _ 46 bp bp NOUN NN Number=Sing _ _ _ _ 47 further further ADV RBR Degree=Cmp _ _ _ _ 48 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 49 than than ADP IN _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 previously previously ADV RB _ _ _ _ _ 52 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 53 human human ADJ JJ Degree=Pos _ _ _ _ 54 placental placental NOUN NN Number=Sing _ _ _ _ 55 cDNA cDNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 9205 # text = A major transcription initiation site was located in three human tissues approximately 560 bp upstream from the translation initiation codon and 380 bp upstream from any previously identified transcription initiation site. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 major major ADJ JJ Degree=Pos _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 initiation initiation NOUN NN Number=Sing _ _ _ _ 5 site site NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 three three NUM CD NumType=Card _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 tissues tissue NOUN NNS Number=Plur _ _ _ _ 12 approximately approximately ADV RB _ _ _ _ _ 13 560 560 NUM CD NumType=Card _ _ _ _ 14 bp bp NOUN NN Number=Sing _ _ _ _ 15 upstream upstream NOUN NN Number=Sing _ _ _ _ 16 from from ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 translation translation NOUN NN Number=Sing _ _ _ _ 19 initiation initiation NOUN NN Number=Sing _ _ _ _ 20 codon codon NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 380 380 NUM CD NumType=Card _ _ _ _ 23 bp bp NOUN NN Number=Sing _ _ _ _ 24 upstream upstream NOUN NN Number=Sing _ _ _ _ 25 from from ADP IN _ _ _ _ _ 26 any any DET DT _ _ _ _ _ 27 previously previously ADV RB _ _ _ _ _ 28 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 initiation initiation NOUN NN Number=Sing _ _ _ _ 31 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 9206 # text = The thromboxane receptor gene has neither a TATA nor a CAAT consensus site. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 thromboxane thromboxane NOUN NN Number=Sing _ _ _ _ 3 receptor receptor NOUN NN Number=Sing _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 neither neither CCONJ CC _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 TATA TATa NOUN NN Number=Sing _ _ _ _ 9 nor nor CCONJ CC _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 CAAT Caat NOUN NN Number=Sing _ _ _ _ 12 consensus consensus NOUN NN Number=Sing _ _ _ _ 13 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 9207 # text = Promoter function of the 5' flanking region of the thromboxane receptor gene was evaluated by transfection of thromboxane receptor gene promoter/chloramphenicol acetyltransferase (CAT) chimera plasmids into platelet-like K562 cells. 1 Promoter Promoter NOUN NN Number=Sing _ _ _ _ 2 function function NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 ' ' PUNCT `` _ _ _ _ _ 7 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 8 region region NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 thromboxane thromboxane NOUN NN Number=Sing _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 evaluated evaluate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 transfection transfection NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 thromboxane thromboxane PRON PRP _ _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ _ 21 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 / / PUNCT , _ _ _ _ SpaceAfter=No 24 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 25 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 CAT Cat NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 chimera chimera NOUN NN Number=Sing _ _ _ _ 30 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 31 into into ADP IN _ _ _ _ _ 32 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 like like INTJ UH _ _ _ _ _ 35 K562 K562 NUM CD NumType=Card _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 9208 # text = Thromboxane receptor promoter activity, as assessed by CAT expression, was relatively weak but was significantly enhanced by phorbol ester treatment. 1 Thromboxane Thromboxane ADJ JJ Degree=Pos _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ _ 3 promoter promoter NOUN NN Number=Sing _ _ _ _ 4 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 as as SCONJ IN _ _ _ _ _ 7 assessed assess VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 CAT cat NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 relatively relatively ADV RB _ _ _ _ _ 14 weak weak ADJ JJ Degree=Pos _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 significantly significantly ADV RB _ _ _ _ _ 18 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 21 ester ester NOUN NN Number=Sing _ _ _ _ 22 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 9209 # text = Functional analysis of 5' deletion constructs in transfected K562 cells and gel mobility shift localized the major phorbol ester-responsive motifs in the thromboxane receptor gene promoter to a cluster of activator protein-2 (AP-2) binding consensus sites located approximately 1.8 kb 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 ' ' PUNCT `` _ _ _ _ _ 6 deletion deletion NOUN NN Number=Sing _ _ _ _ 7 constructs construct NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 K562 K562 NUM CD NumType=Card _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 gel gel NOUN NN Number=Sing _ _ _ _ 14 mobility mobility NOUN NN Number=Sing _ _ _ _ 15 shift shift NOUN NN Number=Sing _ _ _ _ 16 localized localize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 major major ADJ JJ Degree=Pos _ _ _ _ 19 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 20 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 23 motifs motif NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 thromboxane thromboxane NOUN NN Number=Sing _ _ _ _ 27 receptor receptor NOUN NN Number=Sing _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 cluster cluster NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 activator activator NOUN NN Number=Sing _ _ _ _ 35 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 2 2 NUM CD NumType=Card _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 binding binding VERB VBG VerbForm=Ger _ _ _ _ 44 consensus consensus NOUN NN Number=Sing _ _ _ _ 45 sites site NOUN NNS Number=Plur _ _ _ _ 46 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 approximately approximately ADV RB _ _ _ _ _ 48 1.8 1.8 NUM CD NumType=Card _ _ _ _ 49 kb kb NOUN NN Number=Sing _ _ _ _ # sent_id = 9210 # text = 5' from the transcription initiation site. 1 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 ' ' NOUN NNS Number=Plur _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 initiation initiation NOUN NN Number=Sing _ _ _ _ 7 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 9211 # text = These studies are the first to determine the structure and organization of the 5' end of the thromboxane receptor gene and demonstrate that thromboxane receptor gene expression can be regulated by activation of protein kinase C via induction of an AP-2-like nuclear factor binding to upstream promoter elements. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 determine determine VERB VB VerbForm=Inf _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 structure structure NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 organization organization NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ' ' PUNCT `` _ _ _ _ _ 16 end end NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 thromboxane thromboxane NOUN NN Number=Sing _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 thromboxane thromboxane PRON PRP _ _ _ _ _ 26 receptor receptor NOUN NN Number=Sing _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 can can AUX MD VerbForm=Fin _ _ _ _ 30 be be AUX VB VerbForm=Inf _ _ _ _ 31 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 activation activation NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 protein protein NOUN NN Number=Sing _ _ _ _ 36 kinase kinase NOUN NN Number=Sing _ _ _ _ 37 C c NOUN NN Number=Sing _ _ _ _ 38 via via ADP IN _ _ _ _ _ 39 induction induction NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 like like ADP IN _ _ _ _ _ 47 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 48 factor factor NOUN NN Number=Sing _ _ _ _ 49 binding bind VERB VBG VerbForm=Ger _ _ _ _ 50 to to ADP IN _ _ _ _ _ 51 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 52 promoter promoter NOUN NN Number=Sing _ _ _ _ 53 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 9212 # text = These findings strongly suggest that the mechanism for previously described upregulation of platelet thromboxane receptors after acute myocardial infarction is increased thromboxane receptor gene transcription in platelet-progenitor cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 strongly strongly ADV RB _ _ _ _ _ 4 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 previously previously ADV RB _ _ _ _ _ 10 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 platelet platelet NOUN NN Number=Sing _ _ _ _ 14 thromboxane thromboxane PRON PRP _ _ _ _ _ 15 receptors receptor VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 after after ADP IN _ _ _ _ _ 17 acute acute ADJ JJ Degree=Pos _ _ _ _ 18 myocardial myocardial ADJ JJ Degree=Pos _ _ _ _ 19 infarction infarction NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 thromboxane thromboxane ADJ JJ Degree=Pos _ _ _ _ 23 receptor receptor NOUN NN Number=Sing _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9213 # text = Document 0030011736 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011736 0030011736 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9214 # text = The effect of Toremifene on the expression of some genes in human mononuclear cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Toremifene Toremifene PROPN NNP Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 some some DET DT _ _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9215 # text = Toremifene exerts multiple and varied effects on the gene expression of human peripheral mononuclear cells. 1 Toremifene Toremifene PRON PRP _ _ _ _ _ 2 exerts exert VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 varied varied ADJ JJ Degree=Pos _ _ _ _ 6 effects effect NOUN NNS Number=Plur _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 14 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 9216 # text = After short-term, in vitro exposure to therapeutical levels, distinct changes in P-glycoprotein, steroid receptors, p53 and Bcl-2 expression take place. 1 After after ADP IN _ _ _ _ _ 2 short short ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 term term NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 8 exposure exposure NOUN NN Number=Sing _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 therapeutical therapeutical ADJ JJ Degree=Pos _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 14 changes change NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 P- p- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 glycoprotein glycoprotein NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 steroid steroid NOUN NN Number=Sing _ _ _ _ 20 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 p53 p53 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 Bcl Bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 take take NOUN NN Number=Sing _ _ _ _ 29 place place NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 9217 # text = In view of the increasing use of antiestrogens in cancer therapy and prevention, there is obvious merit in long-term in vivo studies to be conducted. 1 In in ADP IN _ _ _ _ _ 2 view view NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 6 use use NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 antiestrogens antiestrogen NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 cancer cancer NOUN NN Number=Sing _ _ _ _ 11 therapy therapy NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 prevention prevention NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 there there PRON EX _ _ _ _ _ 16 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 obvious obvious ADJ JJ Degree=Pos _ _ _ _ 18 merit merit NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 term term NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 vivo vivo ADJ JJ Degree=Pos _ _ _ _ 25 studies study NOUN NNS Number=Plur _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 be be AUX VB VerbForm=Inf _ _ _ _ 28 conducted conduct VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9218 # text = Document 0030011738 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011738 0030011738 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9219 # text = Role of HIV-1 Nef expression in activation pathways in CD4+ T cells. 1 Role role NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 Nef Nef NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 pathways pathway NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 + + SYM SYM _ _ _ _ _ 14 T t NUM CD NumType=Card _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9220 # text = The role of the human immunodeficiency virus (HIV-1) Nef protein in T cell activation pathways was investigated using a Jurkat CD4+ cell line stably transfected with a Nef expression vector. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 7 virus virus NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 X LS _ _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 Nef Nef ADJ JJ Degree=Pos _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 pathways pathway NOUN NNS Number=Plur _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 using use VERB VBG VerbForm=Ger _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 25 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 + + SYM SYM _ _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 line line NOUN NN Number=Sing _ _ _ _ 29 stably stably ADV RB _ _ _ _ _ 30 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 Nef Nef PROPN NNP Number=Sing _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ _ 35 vector vector NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 9221 # text = Secretion of IL-2 and TNF-alpha, surface expression of IL-2R, and DNA-binding activity of NF-kappa B and AP-1 (Fos/Jun) complex in response to phorbol myristate acetate, TNF-alpha, or immobilized antibodies to CD3 were monitored. 1 Secretion Secretion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 surface surface NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2R 2R PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 binding binde VERB VBG VerbForm=Ger _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa NOUN NN Number=Sing _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 Fos Fos PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 34 / / PUNCT , _ _ _ _ SpaceAfter=No 35 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 complex complex NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 response response NOUN NN Number=Sing _ _ _ _ 40 to to PART TO _ _ _ _ _ 41 phorbol phorbol VERB VB VerbForm=Inf _ _ _ _ 42 myristate myristate NOUN NN Number=Sing _ _ _ _ 43 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 or or CCONJ CC _ _ _ _ _ 50 immobilized immobilize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 51 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 52 to to ADP IN _ _ _ _ _ 53 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 54 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 55 monitored monitor VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 9222 # text = These parameters were not modified by Nef expression in Jurkat cells, whereas stimulation with the same stimuli resulted in partial inhibition of LTR activation in Nef+ Jurkat cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 parameters parameter NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 modified modify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 Nef Nef PROPN NNP Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 whereas whereas SCONJ IN _ _ _ _ _ 14 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 same same ADJ JJ Degree=Pos _ _ _ _ 18 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 19 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 partial partial ADJ JJ Degree=Pos _ _ _ _ 22 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 LTR Ltr PROPN NNP Number=Sing _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 Nef Nef PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 + + SYM SYM _ _ _ _ _ 29 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 9223 # text = This inhibition was not mediated through Nef phosphorylation on Thr-15 or GTP-binding activity because mutations in critical sites did not alter this inhibition. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 through through ADP IN _ _ _ _ _ 7 Nef Nef PROPN NNP Number=Sing _ _ _ _ 8 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 Thr Thr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 -15 -15 NUM CD NumType=Card _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 GTP Gtp NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 binding binding VERB VBG VerbForm=Ger _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 because because SCONJ IN _ _ _ _ _ 18 mutations mutation NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 critical critical ADJ JJ Degree=Pos _ _ _ _ 21 sites site NOUN NNS Number=Plur _ _ _ _ 22 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 not not PART RB _ _ _ _ _ 24 alter alter ADV RB _ _ _ _ _ 25 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 26 inhibition inhibition NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 9224 # text = Analysis of truncated LTRs confirmed that inhibition of LTR activation was not mediated through NF-kappa B-binding activity but through the region containing the negative responding elements (NREs). 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 truncated truncated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 LTRs LTRs NOUN NNS Number=Plur _ _ _ _ 5 confirmed confirm VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 LTR LTR PROPN NNP Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 through through ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 binding bind VERB VBG VerbForm=Ger _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 through through ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 region region NOUN NN Number=Sing _ _ _ _ 26 containing contain VERB VBG VerbForm=Ger _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 negative negative ADJ JJ Degree=Pos _ _ _ _ 29 responding responding NOUN NN Number=Sing _ _ _ _ 30 elements element NOUN NNS Number=Plur _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 NREs NREs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 9225 # text = These results suggest that Nef downmodulates LTR activation without significantly inhibiting the capacity of T cells to respond to immunological activations. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Nef Nef PROPN NNP Number=Sing _ _ _ _ 6 downmodulates downmodulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 LTR LTR ADJ JJR Degree=Cmp _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 without without SCONJ IN _ _ _ _ _ 10 significantly significantly ADV RB _ _ _ _ _ 11 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 capacity capacity NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 respond respond VERB VB VerbForm=Inf _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 immunological immunological ADJ JJ Degree=Pos _ _ _ _ 21 activations activation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9226 # text = Document 0030011740 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011740 0030011740 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9227 # text = Apoptosis mediated by HIV protease is preceded by cleavage of Bcl-2. 1 Apoptosis Apoptosis PROPN NNP Number=Sing _ _ _ _ 2 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 HIV HIV NOUN NN Number=Sing _ _ _ _ 5 protease protease NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 preceded preced VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 cleavage cleavage NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9228 # text = Expression of the human immunodeficiency virus type 1 (HIV) protease in cultured cells leads to apoptosis, preceded by cleavage of bcl-2, a key negative regulator of cell death. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 type type NOUN NN Number=Sing _ _ _ _ 8 1 1 NUM CD NumType=Card _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 protease protease NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 cultured cultured ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 preceded preced VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 cleavage cleavage NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 key key ADJ JJ Degree=Pos _ _ _ _ 30 negative negative ADJ JJ Degree=Pos _ _ _ _ 31 regulator regulator NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 cell cell NOUN NN Number=Sing _ _ _ _ 34 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 9229 # text = In contrast, a high level of bcl-2 protects cells in vitro and in vivo from the viral protease and prevents cell death following HIV infection of human lymphocytes, while reducing the yields of viral structural proteins, infectivity, and tumor necrosis factor alpha. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 high high ADJ JJ Degree=Pos _ _ _ _ 6 level level NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 protects protect NOUN NNS Number=Plur _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 vitro vitro NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 vivo vivo NOUN NN Number=Sing _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 viral viral ADJ JJ Degree=Pos _ _ _ _ 21 protease protease NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 prevents prevent NOUN NNS Number=Plur _ _ _ _ 24 cell cell VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 death death SCONJ IN _ _ _ _ _ 26 following follow VERB VBG VerbForm=Ger _ _ _ _ 27 HIV Hiv PROPN NNP Number=Sing _ _ _ _ 28 infection infection NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 while while SCONJ IN _ _ _ _ _ 34 reducing reduce VERB VBG VerbForm=Ger _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 yields yield NOUN NNS Number=Plur _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 viral viral ADJ JJ Degree=Pos _ _ _ _ 39 structural structural ADJ JJ Degree=Pos _ _ _ _ 40 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 infectivity infectivity NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 tumor tumor NOUN NN Number=Sing _ _ _ _ 46 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 47 factor factor NOUN NN Number=Sing _ _ _ _ 48 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 9230 # text = We present a model for HIV replication in which the viral protease depletes the infected cells of bcl-2, leading to oxidative stress-dependent activation of NF kappa B, a cellular factor required for HIV transcription, and ultimately to cell death. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 present present VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 model model NOUN NN Number=Sing _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 HIV Hiv NOUN NN Number=Sing _ _ _ _ 7 replication replication NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 which which PRON WDT PronType=Rel _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 viral viral ADJ JJ Degree=Pos _ _ _ _ 12 protease protease NOUN NN Number=Sing _ _ _ _ 13 depletes deplete VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 infected infect ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 leading lead VERB VBG VerbForm=Ger _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 25 stress stress NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 NF NF PROPN NNP Number=Sing _ _ _ _ 31 kappa kappa PROPN NNP Number=Sing _ _ _ _ 32 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 36 factor factor NOUN NN Number=Sing _ _ _ _ 37 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 for for ADP IN _ _ _ _ _ 39 HIV HIV PROPN NNP Number=Sing _ _ _ _ 40 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 ultimately ultimately ADV RB _ _ _ _ _ 44 to to PART TO _ _ _ _ _ 45 cell cell VERB VB VerbForm=Inf _ _ _ _ 46 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 9231 # text = Purified bcl-2 is cleaved by HIV protease between phenylalanine 112 and alanine 113. 1 Purified Purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 cleaved cleave VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 HIV HIV NOUN NN Number=Sing _ _ _ _ 9 protease protease NOUN NN Number=Sing _ _ _ _ 10 between between ADP IN _ _ _ _ _ 11 phenylalanine phenylalanine NUM CD NumType=Card _ _ _ _ 12 112 112 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 alanine alanine NUM CD NumType=Card _ _ _ _ 15 113 113 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 9232 # text = The results suggest a new option for HIV gene therapy; bcl-2 muteins that have noncleavable alterations surrounding the HIV protease cleavage site. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 new new ADJ JJ Degree=Pos _ _ _ _ 6 option option NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 HIV HIV PROPN NNP Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 therapy therapy NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ; ; PUNCT , _ _ _ _ _ 12 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 muteins mutein NOUN NNS Number=Plur _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 noncleavable noncleavable ADJ JJ Degree=Pos _ _ _ _ 19 alterations alteration NOUN NNS Number=Plur _ _ _ _ 20 surrounding surround VERB VBG VerbForm=Ger _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 HIV HIV PROPN NNP Number=Sing _ _ _ _ 23 protease protease NOUN NN Number=Sing _ _ _ _ 24 cleavage cleavage NOUN NN Number=Sing _ _ _ _ 25 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9233 # text = Document 0030011742 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011742 0030011742 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9234 # text = Differentiation-dependent expression of a human carboxylesterase in monocytic cells and transcription factor binding to the promoter. 1 Differentiation Differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 carboxylesterase carboxylesterase NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 binding bind VERB VBG VerbForm=Ger _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9235 # text = Carboxylesterases play an important role in defense and clearance mechanisms of the monocyte/macrophage system. 1 Carboxylesterases Carboxylesterase NOUN NNS Number=Plur _ _ _ _ 2 play play VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 important important ADJ JJ Degree=Pos _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 defense defense NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 clearance clearance NOUN NN Number=Sing _ _ _ _ 10 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 16 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 9236 # text = During the differentiation process of cells from the monocytic cell line THP-1 we observed a transient transcriptional upregulation of a human carboxylesterase analyzed by means of Northern blots. 1 During during ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 4 process process NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 line line NOUN NN Number=Sing _ _ _ _ 12 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 16 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 transient transient ADJ JJ Degree=Pos _ _ _ _ 19 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 20 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 carboxylesterase carboxylesterase NOUN NN Number=Sing _ _ _ _ 25 analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 means means NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 30 blots blot NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 9237 # text = In PMA-treated THP-1 cells we could detect three major transcription initiation sites as revealed by Nuclease Protection Assay carried out with two overlapping antisense RNA probes. 1 In in ADP IN _ _ _ _ _ 2 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 10 could could AUX MD VerbForm=Fin _ _ _ _ 11 detect detect VERB VB VerbForm=Inf _ _ _ _ 12 three three NUM CD NumType=Card _ _ _ _ 13 major major ADJ JJ Degree=Pos _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 initiation initiation NOUN NN Number=Sing _ _ _ _ 16 sites site NOUN NNS Number=Plur _ _ _ _ 17 as as SCONJ IN _ _ _ _ _ 18 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 Nuclease Nuclease PROPN NNP Number=Sing _ _ _ _ 21 Protection protection PROPN NNP Number=Sing _ _ _ _ 22 Assay assay PROPN NNP Number=Sing _ _ _ _ 23 carried carry VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 out out ADV RB _ _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 two two NUM CD NumType=Card _ _ _ _ 27 overlapping overlapp ADJ JJ Degree=Pos _ _ _ _ 28 antisense antisense NOUN NN Number=Sing _ _ _ _ 29 RNA RNa ADP IN _ _ _ _ _ 30 probes probe NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 9238 # text = We have recently cloned the carboxylesterase upstream sequence and showed its basal promoter activity in CHO cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 recently recently ADV RB _ _ _ _ _ 4 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 carboxylesterase carboxylesterase NOUN NN Number=Sing _ _ _ _ 7 upstream upstream NOUN NN Number=Sing _ _ _ _ 8 sequence sequence NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 12 basal basal ADJ JJ Degree=Pos _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 CHO Cho PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 9239 # text = Using electrophoretic mobility shift analysis we demonstrated that the promoter region spanning base pairs -1 to -275, which contains several putative binding sites for transcription factors, is bound by nuclear factors Sp1 and IRBP but not by C/EBPs. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 3 mobility mobility NOUN NN Number=Sing _ _ _ _ 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 analysis analysis NOUN NN Number=Sing _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 region region NOUN NN Number=Sing _ _ _ _ 12 spanning span VERB VBG VerbForm=Ger _ _ _ _ 13 base base NOUN NN Number=Sing _ _ _ _ 14 pairs pair NOUN NNS Number=Plur _ _ _ _ 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 - - SYM SYM _ _ _ _ SpaceAfter=No 19 275 275 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 several several ADJ JJ Degree=Pos _ _ _ _ 24 putative putative NOUN NN Number=Sing _ _ _ _ 25 binding binding VERB VBG VerbForm=Ger _ _ _ _ 26 sites site NOUN NNS Number=Plur _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 bound bound ADJ JJ Degree=Pos _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 35 factors factor NOUN NNS Number=Plur _ _ _ _ 36 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 IRBP Irbp NOUN NN Number=Sing _ _ _ _ 39 but but CCONJ CC _ _ _ _ _ 40 not not ADV RB _ _ _ _ _ 41 by by ADP IN _ _ _ _ _ 42 C/EBPs C/EBPs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 9240 # text = Taken together these data indicate that carboxylesterase gene transcription in THP-1 cells starts at multiple initiation sites and that Sp1 and IRBP may be critical factors for modulating the differentiation-dependent transcription of this human carboxylesterase gene. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 data data NOUN NN Number=Sing _ _ _ _ 5 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 carboxylesterase carboxylesterase NOUN NN Number=Sing _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 THP THP NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 starts start VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 at at ADP IN _ _ _ _ _ 17 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 18 initiation initiation NOUN NN Number=Sing _ _ _ _ 19 sites site NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 Sp1 sp1 PROPN NNP Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 IRBP Irbp PROPN NNP Number=Sing _ _ _ _ 25 may may AUX MD VerbForm=Fin _ _ _ _ 26 be be AUX VB VerbForm=Inf _ _ _ _ 27 critical critical ADJ JJ Degree=Pos _ _ _ _ 28 factors factor NOUN NNS Number=Plur _ _ _ _ 29 for for SCONJ IN _ _ _ _ _ 30 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 35 transcription transcription NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 38 human human ADJ JJ Degree=Pos _ _ _ _ 39 carboxylesterase carboxylesterase NOUN NN Number=Sing _ _ _ _ 40 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9241 # text = Document 0030011747 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011747 0030011747 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9242 # text = Engagement of natural cytotoxicity programs regulates AP-1 expression in the NKL human NK cell line. 1 Engagement engagement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 natural natural ADJ JJ Degree=Pos _ _ _ _ 4 cytotoxicity cytotoxicity NOUN NN Number=Sing _ _ _ _ 5 programs program NOUN NNS Number=Plur _ _ _ _ 6 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 NKL NKL PROPN NNP Number=Sing _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 NK Nk PROPN NNP Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9243 # text = NK cell cytotoxicity is a fast and efficient mechanism of target cell lysis. 1 NK NK PROPN NNP Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 cytotoxicity cytotoxicity NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 fast fast ADJ JJ Degree=Pos _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 9 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 target target NOUN NN Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 lysis lysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 9244 # text = Using transcription analysis, such as multiplex messenger assays, we show here that natural cytotoxicity exerted by the human NKL cell line correlates with mRNA accumulation of very early activator protein (AP)-1 transcription factor genes such as JunB, FosB and c-Fos. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 such such ADJ JJ Degree=Pos _ _ _ _ 6 as as ADP IN _ _ _ _ _ 7 multiplex multiplex ADJ JJ Degree=Pos _ _ _ _ 8 messenger messenger NOUN NN Number=Sing _ _ _ _ 9 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 12 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 here here ADV RB PronType=Dem _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 natural natural ADJ JJ Degree=Pos _ _ _ _ 16 cytotoxicity cytotoxicity NOUN NN Number=Sing _ _ _ _ 17 exerted exert VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 NKL Nkl NOUN NN Number=Sing _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 line line NOUN NN Number=Sing _ _ _ _ 24 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 mRNA mRNA DET DT Definite=Ind|PronType=Art _ _ _ _ 27 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 very very ADV RB _ _ _ _ _ 30 early early ADJ JJ Degree=Pos _ _ _ _ 31 activator activator NOUN NN Number=Sing _ _ _ _ 32 protein protein NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 - - PUNCT : _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ _ 38 transcription transcription NOUN NN Number=Sing _ _ _ _ 39 factor factor NOUN NN Number=Sing _ _ _ _ 40 genes gene NOUN NNS Number=Plur _ _ _ _ 41 such such ADJ JJ Degree=Pos _ _ _ _ 42 as as ADP IN _ _ _ _ _ 43 JunB JunB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 FosB FosB PROPN NNP Number=Sing _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 c- c- SYM NFP _ _ _ _ SpaceAfter=No 48 Fos Fos NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 9245 # text = In addition, DNA-binding activities of Jun-Fos heterodimers were observed by electrophoretic mobility shift assays during the course of natural cytotoxicity. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 binding binding VERB VBG VerbForm=Ger _ _ _ _ 7 activities activity NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 Fos Fos PROPN NNP Number=Sing _ _ _ _ 12 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 17 mobility mobility NOUN NN Number=Sing _ _ _ _ 18 shift shift NOUN NN Number=Sing _ _ _ _ 19 assays assays VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 during during ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 course course NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 natural natural ADJ JJ Degree=Pos _ _ _ _ 25 cytotoxicity cytotoxicity NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 9246 # text = Interaction between immunoglobulin-like transcript-2/leukocyte 1 Interaction interaction NOUN NN Number=Sing _ _ _ _ 2 between between ADP IN _ _ _ _ _ 3 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 like like ADJ JJ Degree=Pos _ _ _ _ 6 transcript transcript NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 10 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ # sent_id = 9247 # text = Ig-like receptor 1 on NKL cells and HLA-B27 on target cells leads to an impairment of NKL natural cytotoxicity, which correlates with an absence of JunB, FosB, and c-Fos transcription, as well as an absence of their DNA-binding activity. 1 Ig ig ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 like like ADJ JJ Degree=Pos _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ _ 5 1 1 NUM CD NumType=Card _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 NKL Nkl ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 HLA HLa NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 B27 B27 NOUN NN Number=Sing _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 target target NOUN NN Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 impairment impairment NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 NKL NKL PROPN NNP Number=Sing _ _ _ _ 22 natural natural ADJ JJ Degree=Pos _ _ _ _ 23 cytotoxicity cytotoxicity NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 which which PRON WDT PronType=Rel _ _ _ _ 26 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 absence absence NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 JunB JunB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 FosB FosB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 Fos Fo NOUN NNS Number=Plur _ _ _ _ 39 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 as as ADV RB _ _ _ _ _ 42 well well ADV RB Degree=Pos _ _ _ _ 43 as as ADP IN _ _ _ _ _ 44 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 45 absence absence NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 48 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 binding binding VERB VBG VerbForm=Ger _ _ _ _ 51 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 9248 # text = Our studies thus indicate that, despite the rapidity of NK cell-mediated lysis, AP-1 transcription factor is activated during the early stage of NK cell cytolytic programs and that engagement of NK cell inhibitory receptors for MHC class I molecules impairs the very early activation of AP-1. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 thus thus ADV RB _ _ _ _ _ 4 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 despite despite ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 rapidity rapidity NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NK NK PROPN NNP Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 lysis lysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 during during ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 early early ADJ JJ Degree=Pos _ _ _ _ 27 stage stage NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 NK NK PROPN NNP Number=Sing _ _ _ _ 30 cell cell VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 cytolytic cytolytic ADJ JJ Degree=Pos _ _ _ _ 32 programs program NOUN NNS Number=Plur _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 35 engagement engagement NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 NK NK PROPN NNP Number=Sing _ _ _ _ 38 cell cell VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 39 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 40 receptors receptor NOUN NNS Number=Plur _ _ _ _ 41 for for ADP IN _ _ _ _ _ 42 MHC MHC PROPN NNP Number=Sing _ _ _ _ 43 class class NOUN NN Number=Sing _ _ _ _ 44 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 45 molecules molecule NOUN NNS Number=Plur _ _ _ _ 46 impairs impairs VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 very very ADV RB _ _ _ _ _ 49 early early ADJ JJ Degree=Pos _ _ _ _ 50 activation activation NOUN NN Number=Sing _ _ _ _ 51 of of ADP IN _ _ _ _ _ 52 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 54 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9249 # text = Document 0030011751 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011751 0030011751 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9250 # text = Octamer independent activation of transcription from the kappa immunoglobulin germline promoter. 1 Octamer Octamer PROPN NNP Number=Sing _ _ _ _ 2 independent independent ADJ JJ Degree=Pos _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 immunoglobulin immunoglobulin ADP IN _ _ _ _ _ 10 germline germline NOUN NN Number=Sing _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9251 # text = Previous analyses of immunoglobulin V region promoters has led to the discovery of a common octamer motif which is functionally important in the tissue-specific and developmentally regulated transcriptional activation of immunoglobulin genes. 1 Previous previous ADJ JJ Degree=Pos _ _ _ _ 2 analyses analysis NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 5 V V PROPN NNP Number=Sing _ _ _ _ 6 region region NOUN NN Number=Sing _ _ _ _ 7 promoters promoter NOUN NNS Number=Plur _ _ _ _ 8 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 led lead VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 discovery discovery NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 common common ADJ JJ Degree=Pos _ _ _ _ 16 octamer octamer NOUN NN Number=Sing _ _ _ _ 17 motif motif NOUN NN Number=Sing _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 functionally functionally ADV RB _ _ _ _ _ 21 important important ADJ JJ Degree=Pos _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 specific specific ADJ JJ Degree=Pos _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 developmentally developmentally ADV RB _ _ _ _ _ 29 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 31 activation activation NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 34 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 9252 # text = The germline promoters 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 germline germline NOUN NN Number=Sing _ _ _ _ 3 promoters promoter NOUN NNS Number=Plur _ _ _ _ # sent_id = 9253 # text = (Ko) located upstream of the J region gene segments of the kappa locus also contain an octamer motif (containing a single base pair mutation and referred to as the variant octamer) which has been shown previously to bind Oct-1 and Oct-2 transcription factors in vitro. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 Ko Ko PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 upstream upstream NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 J j PROPN NNP Number=Sing _ _ _ _ 9 region region NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 segments segment NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 kappa kappa PROPN NNP Number=Sing _ _ _ _ 15 locus locus PROPN NNP Number=Sing _ _ _ _ 16 also also ADV RB _ _ _ _ _ 17 contain contain VERB VB VerbForm=Inf _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 octamer octamer NOUN NN Number=Sing _ _ _ _ 20 motif motif NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 containing contain VERB VBG VerbForm=Ger _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 single single ADJ JJ Degree=Pos _ _ _ _ 25 base base NOUN NN Number=Sing _ _ _ _ 26 pair pair NOUN NN Number=Sing _ _ _ _ 27 mutation mutation NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 referred refer VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 as as ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 variant variant ADJ JJ Degree=Pos _ _ _ _ 34 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 which which PRON WDT PronType=Rel _ _ _ _ 37 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 39 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 40 previously previously ADV RB _ _ _ _ _ 41 to to ADP IN _ _ _ _ _ 42 bind bind ADP IN _ _ _ _ _ 43 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT , _ _ _ _ SpaceAfter=No 45 1 1 NUM CD NumType=Card _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 2 2 NUM CD NumType=Card _ _ _ _ 50 transcription transcription NOUN NN Number=Sing _ _ _ _ 51 factors factor NOUN NNS Number=Plur _ _ _ _ 52 in in ADP IN _ _ _ _ _ 53 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 9254 # text = To further elucidate the role of this variant octamer motif in the regulation of germline transcription from the unrearranged kappa locus, we have quantitated the relative binding affinity of Oct-1 and Oct-2 for the variant octamer motif and determined the functional role of this octamer motif in transcriptional activation. 1 To to PART TO _ _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 elucidate elucidate VERB VB VerbForm=Inf _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 variant variant NOUN NN Number=Sing _ _ _ _ 9 octamer octamer NOUN NN Number=Sing _ _ _ _ 10 motif motif NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 regulation regulation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 germline germline NOUN NN Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 unrearranged unrearrange ADJ JJ Degree=Pos _ _ _ _ 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 locus locus NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 24 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 quantitated quantitate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 relative relative NOUN NN Number=Sing _ _ _ _ 28 binding binding VERB VBG VerbForm=Ger _ _ _ _ 29 affinity affinity NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 2 2 NUM CD NumType=Card _ _ _ _ 38 for for ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 variant variant ADJ JJ Degree=Pos _ _ _ _ 41 octamer octamer NOUN NN Number=Sing _ _ _ _ 42 motif motif NOUN NN Number=Sing _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 determined determine VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 functional functional ADJ JJ Degree=Pos _ _ _ _ 47 role role NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 50 octamer octamer NOUN NN Number=Sing _ _ _ _ 51 motif motif NOUN NN Number=Sing _ _ _ _ 52 in in ADP IN _ _ _ _ _ 53 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 54 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 9255 # text = We find that, although the variant octamer motif binds Oct-1 and Oct-2 in vitro with 5-fold lower affinity than the consensus octamer motif, mutation of the variant octamer motif to either a consensus octamer or non-octamer motif has no effect on transcriptional activation from the germline promoter. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 find find VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 although although SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 variant variant ADJ JJ Degree=Pos _ _ _ _ 8 octamer octamer NOUN NN Number=Sing _ _ _ _ 9 motif motif NOUN NN Number=Sing _ _ _ _ 10 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 -1 -1 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 vitro vitro NUM CD NumType=Card _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 fold fold VERB VB VerbForm=Inf _ _ _ _ 23 lower lower ADJ JJR Degree=Cmp _ _ _ _ 24 affinity affinity NOUN NN Number=Sing _ _ _ _ 25 than than ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 consensus consensus NOUN NN Number=Sing _ _ _ _ 28 octamer octamer NOUN NN Number=Sing _ _ _ _ 29 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 mutation mutation NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 variant variant ADJ JJ Degree=Pos _ _ _ _ 35 octamer octamer NOUN NN Number=Sing _ _ _ _ 36 motif motif NOUN NN Number=Sing _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 either either CCONJ CC _ _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 consensus consensus NOUN NN Number=Sing _ _ _ _ 41 octamer octamer NOUN NN Number=Sing _ _ _ _ 42 or or CCONJ CC _ _ _ _ _ 43 non-octamer non-octamer NOUN NN Number=Sing _ _ _ _ 44 motif motif NOUN NN Number=Sing _ _ _ _ 45 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 46 no no DET DT _ _ _ _ _ 47 effect effect NOUN NN Number=Sing _ _ _ _ 48 on on ADP IN _ _ _ _ _ 49 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 50 activation activation NOUN NN Number=Sing _ _ _ _ 51 from from ADP IN _ _ _ _ _ 52 the the DET DT Definite=Def|PronType=Art _ _ _ _ 53 germline germline NOUN NN Number=Sing _ _ _ _ 54 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 9256 # text = We also find significant differences in activation of germline and V region promoters by kappa enhancers. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 find find VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 significant significant ADJ JJ Degree=Pos _ _ _ _ 5 differences difference NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 germline germline NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 V have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 region region NOUN NN Number=Sing _ _ _ _ 13 promoters promoter NOUN NNS Number=Plur _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 enhancers enhancer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 9257 # text = Our results suggest that the germline promoters and V region promoters differ in their dependence on octamer for activation and respond differently to enhancer activation. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 germline germline NOUN NN Number=Sing _ _ _ _ 7 promoters promoter NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 V have PROPN NNP Number=Sing _ _ _ _ 10 region region NOUN NN Number=Sing _ _ _ _ 11 promoters promoter NOUN NNS Number=Plur _ _ _ _ 12 differ differ VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 dependence dependence NOUN NN Number=Sing _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 octamer octamer NOUN NN Number=Sing _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 respond respond VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 differently differently ADV RB _ _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 9258 # text = These findings have important implications in regulation of germline transcription as well as concomitant activation of the V-J recombination of the kappa light chain locus. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 important important ADJ JJ Degree=Pos _ _ _ _ 5 implications implication NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 regulation regulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 germline germline NOUN NN Number=Sing _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 as as ADV RB _ _ _ _ _ 12 well well ADV RB Degree=Pos _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 concomitant concomitant ADJ JJ Degree=Pos _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 V V PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 J j PROPN NNP Number=Sing _ _ _ _ 21 recombination recombination NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 light light NOUN NN Number=Sing _ _ _ _ 26 chain chain NOUN NN Number=Sing _ _ _ _ 27 locus locus NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9259 # text = Document 0030011752 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011752 0030011752 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9260 # text = Recombinant NFAT1 (NFATp) is regulated by calcineurin in T cells and mediates transcription of several cytokine genes. 1 Recombinant Recombinant PROPN NNP Number=Sing _ _ _ _ 2 NFAT1 NFAT1 PROPN NNP Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 NFATp NFATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 mediates mediate NOUN NNS Number=Plur _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 several several ADJ JJ Degree=Pos _ _ _ _ 18 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 19 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9261 # text = Transcription factors of the NFAT family play a key role in the transcription of cytokine genes and other genes during the immune response. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 6 family family NOUN NN Number=Sing _ _ _ _ 7 play play VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 key key ADJ JJ Degree=Pos _ _ _ _ 10 role role NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 16 genes gene NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 other other ADJ JJ Degree=Pos _ _ _ _ 19 genes gene NOUN NNS Number=Plur _ _ _ _ 20 during during ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 immune immune ADJ JJ Degree=Pos _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 9262 # text = We have identified two new isoforms of the transcription factor NFAT1 (previously termed NFATp) that are the predominant isoforms expressed in murine and human T cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 new new ADJ JJ Degree=Pos _ _ _ _ 6 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 NFAT1 NFAT1 PROPN NNP Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 previously previously ADV RB _ _ _ _ _ 14 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 NFATp NFATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 predominant predominant ADJ JJ Degree=Pos _ _ _ _ 21 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 22 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 murine murine NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 T t PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 9263 # text = When expressed in Jurkat T cells, recombinant NFAT1 is regulated, as expected, by the calmodulin-dependent phosphatase calcineurin, and its function is inhibited by the immunosuppressive agent cyclosporin A (CsA). 1 When when ADV WRB PronType=Int _ _ _ _ 2 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 5 T T PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 9 NFAT1 nfat1 PROPN NNP Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 as as SCONJ IN _ _ _ _ _ 14 expected expect VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 calmodulin calmodulin NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 21 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 22 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 26 function function NOUN NN Number=Sing _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 32 agent agent NOUN NN Number=Sing _ _ _ _ 33 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 34 A A PROPN NNP Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 9264 # text = Transactivation by recombinant NFAT1 in Jurkat T cells requires dual stimulation with ionomycin and phorbol 12-myristate 13-acetate; this activity is potentiated by coexpression of constitutively active calcineurin and is inhibited by CsA. 1 Transactivation Transactivation NOUN NN Number=Sing _ _ _ _ 2 by by ADP IN _ _ _ _ _ 3 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 4 NFAT1 NFAT1 PROPN NNP Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 7 T T PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 dual dual ADJ JJ Degree=Pos _ _ _ _ 11 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 ionomycin ionomycin NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 16 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT : _ _ _ _ SpaceAfter=No 18 myristate myristate NOUN NN Number=Sing _ _ _ _ 19 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT : _ _ _ _ SpaceAfter=No 21 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ; ; PUNCT , _ _ _ _ _ 23 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 potentiated potentiate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 coexpression coexpression NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 constitutively constitutively ADV RB _ _ _ _ _ 31 active active ADJ JJ Degree=Pos _ _ _ _ 32 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 9265 # text = Immunocytochemical analysis indicates that recombinant NFAT1 localizes in the cytoplasm of transiently transfected T cells and translocates into the nucleus in a CsA-sensitive manner following ionomycin stimulation. 1 Immunocytochemical Immunocytochemical ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 indicates indicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 6 NFAT1 nfat1 NOUN NN Number=Sing _ _ _ _ 7 localizes localize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 transiently transiently ADV RB _ _ _ _ _ 13 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 translocates translocate NOUN NNS Number=Plur _ _ _ _ 18 into into ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 26 manner manner NOUN NN Number=Sing _ _ _ _ 27 following follow VERB VBG VerbForm=Ger _ _ _ _ 28 ionomycin ionomycin ADP IN _ _ _ _ _ 29 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 9266 # text = When expressed in COS cells, however, NFAT1 is capable of transactivation, but it is not regulated correctly: its subcellular localization and transcriptional function are not affected by stimulation of the COS cells with ionomycin and phorbol 12-myristate 13-acetate. 1 When when ADV WRB PronType=Int _ _ _ _ 2 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 COS Cos PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 however however ADV RB _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 NFAT1 NFAT1 PROPN NNP Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 capable capable ADJ JJ Degree=Pos _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 transactivation transactivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 not not PART RB _ _ _ _ _ 19 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 correctly correctly ADV RB _ _ _ _ SpaceAfter=No 21 : : PUNCT : _ _ _ _ _ 22 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 23 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 subcellular subcellular ADJ JJ Degree=Pos _ _ _ _ 25 localization localization NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 28 function function NOUN NN Number=Sing _ _ _ _ 29 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 not not PART RB _ _ _ _ _ 31 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 COS COS PROPN NNP Number=Sing _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ _ 38 with with ADP IN _ _ _ _ _ 39 ionomycin ionomycin NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 42 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 - - PUNCT : _ _ _ _ SpaceAfter=No 44 myristate myristate NOUN NN Number=Sing _ _ _ _ 45 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 46 - - PUNCT : _ _ _ _ SpaceAfter=No 47 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 9267 # text = Recombinant NFAT1 can mediate transcription of the interleukin-2, interleukin-4, tumor necrosis factor alpha, and granulocyte-macrophage colony-stimulating factor promoters in T cells, suggesting that NFAT1 contributes to the CsA-sensitive transcription of these genes during the immune response. 1 Recombinant Recombinant NOUN NN Number=Sing _ _ _ _ 2 NFAT1 nfat1 NOUN NN Number=Sing _ _ _ _ 3 can can AUX MD VerbForm=Fin _ _ _ _ 4 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 tumor tumor NOUN NN Number=Sing _ _ _ _ 17 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 25 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 stimulating stimulate VERB VBG VerbForm=Ger _ _ _ _ 28 factor factor NOUN NN Number=Sing _ _ _ _ 29 promoters promoter NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 35 that that SCONJ IN _ _ _ _ _ 36 NFAT1 NFAT1 PROPN NNP Number=Sing _ _ _ _ 37 contributes contribute VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 to to ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 43 transcription transcription NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 46 genes gene NOUN NNS Number=Plur _ _ _ _ 47 during during ADP IN _ _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 immune immune ADJ JJ Degree=Pos _ _ _ _ 50 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9268 # text = Document 0030011759 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011759 0030011759 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9269 # text = A novel immunosuppressive factor in bovine colostrum blocks activation of the interleukin 2 gene enhancer at the NFAT site. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 novel novel NOUN NN Number=Sing _ _ _ _ 3 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 bovine bovine ADJ JJ Degree=Pos _ _ _ _ 7 colostrum colostrum NOUN NN Number=Sing _ _ _ _ 8 blocks block NOUN NNS Number=Plur _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 interleukin interleukin ADJ JJ Degree=Pos _ _ _ _ 13 2 2 NUM CD NumType=Card _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 16 at at ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 19 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9270 # text = A factor in bovine colostrum (colostrum inhibitory factor, CIF) inhibits interleukin 2 (IL2) production in activated T helper cells by blocking the accumulation of IL2 mRNA. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 bovine bovine NOUN NN Number=Sing _ _ _ _ 5 colostrum colostrum NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 colostrum colostrum NOUN NN Number=Sing _ _ _ _ 8 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 CIF CIF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 15 2 2 NUM CD NumType=Card _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 IL2 IL2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 production production NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 helper helper ADJ JJR Degree=Cmp _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 by by SCONJ IN _ _ _ _ _ 26 blocking blocke VERB VBG VerbForm=Ger _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 IL2 IL2 NUM CD NumType=Card _ _ _ _ 31 mRNA mRNA NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 9271 # text = To determine whether CIF blocks at the level of IL2 transcription, we introduced reporter plasmids into the human T leukemia cell line Jurkat by transient transfection. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 CIF Cif NOUN NN Number=Sing _ _ _ _ 5 blocks block NOUN NNS Number=Plur _ _ _ _ 6 at at ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 level level NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 IL2 IL2 NUM CD NumType=Card _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 introduced introduce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 reporter reporter NOUN NN Number=Sing _ _ _ _ 16 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 17 into into ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 line line NOUN NN Number=Sing _ _ _ _ 24 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 transient transient ADJ JJ Degree=Pos _ _ _ _ 27 transfection transfection NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 9272 # text = These contained the luciferase gene under the control of either the human IL2 upstream enhancer region (segments -326 to +45) or three repeats of the NFAT element contained within it (segments -255 to -285). 1 These these PRON DT Number=Plur|PronType=Dem _ _ _ _ 2 contained contain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 5 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 under under ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 control control NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 either either CCONJ CC _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 IL2 Il2 NOUN NN Number=Sing _ _ _ _ 14 upstream upstream NOUN NN Number=Sing _ _ _ _ 15 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 16 region region NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 segments segment NOUN NNS Number=Plur _ _ _ _ 19 -326 -326 NUM CD NumType=Card _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 +45 +45 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 three three NUM CD NumType=Card _ _ _ _ 25 repeats repeat NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 NFAT Nfat PROPN NNP Number=Sing _ _ _ _ 29 element element NOUN NN Number=Sing _ _ _ _ 30 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 within within ADP IN _ _ _ _ _ 32 it it PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 segments segment NOUN NNS Number=Plur _ _ _ _ 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 255 255 NUM CD NumType=Card _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 - - SYM SYM _ _ _ _ SpaceAfter=No 39 285 285 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 9273 # text = Expression of luciferase in these cells was induced by phorbol myristate acetate plus a calcium ionophore. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 11 myristate myristate NOUN NN Number=Sing _ _ _ _ 12 acetate acetate NOUN NN Number=Sing _ _ _ _ 13 plus plus CCONJ CC _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 calcium calcium NOUN NN Number=Sing _ _ _ _ 16 ionophore ionophore NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 9274 # text = CIF inhibited induction of either construct as did cyclosporine, which is known to block activation of the NFAT element. 1 CIF CIF AUX VB VerbForm=Inf _ _ _ _ 2 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 induction induction NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 either either DET DT _ _ _ _ _ 6 construct construct NOUN NN Number=Sing _ _ _ _ 7 as as SCONJ IN _ _ _ _ _ 8 did do VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 cyclosporine cyclosporine NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 block block VERB VB VerbForm=Inf _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 NFAT Nfat PROPN NNP Number=Sing _ _ _ _ 20 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 9275 # text = CIF failed to inhibit several other enhancer elements. 1 CIF CIF PRON PRP Case=Acc|Number=Sing|Person=1|PronType=Prs|Reflex=Yes _ _ _ _ 2 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 5 several several ADJ JJ Degree=Pos _ _ _ _ 6 other other ADJ JJ Degree=Pos _ _ _ _ 7 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 8 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 9276 # text = The NFAT-controlled luciferase gene system distinguishes CIF from other T cell inhibitory activities present in colostrum, in particular, TGF beta 1 and TGF beta 2 and the glucocorticoids. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 controlled controll VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 system system NOUN NN Number=Sing _ _ _ _ 8 distinguishes distinguish VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 CIF CIF PROPN NNP Number=Sing _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 other other ADJ JJ Degree=Pos _ _ _ _ 12 T T PROPN NNP Number=Sing _ _ _ _ 13 cell cell VERB VB VerbForm=Inf _ _ _ _ 14 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 15 activities activity NOUN NNS Number=Plur _ _ _ _ 16 present present VERB VB VerbForm=Inf _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 colostrum colostrum NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 particular particular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 TGF TGF PROPN NNP Number=Sing _ _ _ _ 24 beta beta NOUN NN Number=Sing _ _ _ _ 25 1 1 NUM CD NumType=Card _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 TGF TGF NOUN NN Number=Sing _ _ _ _ 28 beta beta NOUN NN Number=Sing _ _ _ _ 29 2 2 NUM CD NumType=Card _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 9277 # text = Stably transfected Jurkat cells behaved similarly to the transiently transfected ones with respect to inhibition by CIF and cyclosporine. 1 Stably Stably ADV RB _ _ _ _ _ 2 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 behaved behave VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 similarly similarly ADV RB _ _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transiently transiently ADV RB Degree=Pos _ _ _ _ 10 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 ones one NOUN NNS Number=Plur _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 respect respect NOUN NN Number=Sing _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 inhibition inhibition VERB VB VerbForm=Inf _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 CIF CIF NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 cyclosporine cyclosporine NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 9278 # text = The NFAT-luc assay is a useful technique for the rapid, sensitive measurement of CIF or other immunosuppressants with a similar mode of action. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 luc luc NOUN NN Number=Sing _ _ _ _ 5 assay assay NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 useful useful ADJ JJ Degree=Pos _ _ _ _ 9 technique technique NOUN NN Number=Sing _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 rapid rapid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 15 measurement measurement NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 CIF CIF PROPN NNP Number=Sing _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 other other ADJ JJ Degree=Pos _ _ _ _ 20 immunosuppressants immunosuppressant NOUN NNS Number=Plur _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 similar similar ADJ JJ Degree=Pos _ _ _ _ 24 mode mode NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 action action NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9279 # text = Document 0030011762 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011762 0030011762 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9280 # text = Phenylarsine oxide inhibits ex vivo HIV-1 expression. 1 Phenylarsine Phenylarsine VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 oxide oxide ADJ JJ Degree=Pos _ _ _ _ 3 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 4 ex ex SYM SYM _ _ _ _ _ 5 vivo vivo NOUN NN Number=Sing _ _ _ _ 6 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9281 # text = Phenylarsine oxide (PAO), which is described as an inhibitor of tyrosine phosphatase activity, inhibits 1 Phenylarsine Phenylarsine NOUN NN Number=Sing _ _ _ _ 2 oxide oxide NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 PAO pao PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 15 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 inhibits inhibits NOUN NNS Number=Plur _ _ _ _ # sent_id = 9282 # text = H2O2 release from human peripheral blood mononuclear cells (PBMCs) as measured by electrochemistry. 1 H2O2 H2O2 NUM CD NumType=Card _ _ _ _ 2 release release NOUN NN Number=Sing _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 6 blood blood NOUN NN Number=Sing _ _ _ _ 7 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 PBMCs PBMC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 as as SCONJ IN _ _ _ _ _ 13 measured measure VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 electrochemistry electrochemistry NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 9283 # text = Since human immunodeficiency virus type 1 (HIV-1) replication is known to be favored under oxidative stress conditions, ex vivo experiments using uninfected PBMCs, primary monocytes or a latently infected promonocytic U1 cell line show that HIV-1 replication and reactivation, monitored by p24 antigen measurement, are inhibited by PAO in a time- and concentration-dependent manner. 1 Since since ADP IN _ _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 4 virus virus NOUN NN Number=Sing _ _ _ _ 5 type type NOUN NN Number=Sing _ _ _ _ 6 1 1 NUM CD NumType=Card _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 replication replication NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 be be AUX VB VerbForm=Inf _ _ _ _ 17 favored favore VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 under under ADP IN _ _ _ _ _ 19 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 20 stress stress NOUN NN Number=Sing _ _ _ _ 21 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 ex ex VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 24 vivo vivo NOUN NN Number=Sing _ _ _ _ 25 experiments experiment NOUN NNS Number=Plur _ _ _ _ 26 using use VERB VBG VerbForm=Ger _ _ _ _ 27 uninfected uninfected ADJ JJ Degree=Pos _ _ _ _ 28 PBMCs PBMC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 primary primary ADJ JJ Degree=Pos _ _ _ _ 31 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 32 or or CCONJ CC _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 latently latently ADV RB _ _ _ _ _ 35 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 37 U1 u1 NOUN NN Number=Sing _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 line line NOUN NN Number=Sing _ _ _ _ 40 show show NOUN NN Number=Sing _ _ _ _ 41 that that PRON WDT PronType=Rel _ _ _ _ 42 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 1 1 NUM CD NumType=Card _ _ _ _ 45 replication replication NOUN NN Number=Sing _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 reactivation reactivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 monitored monitor VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 by by ADP IN _ _ _ _ _ 51 p24 p24 NUM CD NumType=Card _ _ _ _ 52 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 53 measurement measurement NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 , , PUNCT , _ _ _ _ _ 55 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 56 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 57 by by ADP IN _ _ _ _ _ 58 PAO pao PROPN NNP Number=Sing _ _ _ _ 59 in in ADP IN _ _ _ _ _ 60 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 61 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 62 - - PUNCT , _ _ _ _ _ 63 and and CCONJ CC _ _ _ _ _ 64 concentration concentration NOUN NN Number=Sing _ _ _ SpaceAfter=No 65 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 66 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 67 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 68 . . PUNCT . _ _ _ _ _ # sent_id = 9284 # text = These observations can be linked with the inhibition of NF-kappa B activation when uninfected monocytes are induced by either tumor necrosis factor alpha (TNF-alpha) phorbol 12-myristate 13-acetate (PMA) or lipopolysaccharide (LPS). 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 can can AUX MD VerbForm=Fin _ _ _ _ 4 be be AUX VB VerbForm=Inf _ _ _ _ 5 linked link VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 when when ADV WRB PronType=Int _ _ _ _ 16 uninfected uninfect ADJ JJ Degree=Pos _ _ _ _ 17 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 either either DET DT _ _ _ _ _ 22 tumor tumor NOUN NN Number=Sing _ _ _ _ 23 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 alpha alpha NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 32 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 - - PUNCT : _ _ _ _ SpaceAfter=No 34 myristate myristate NOUN NN Number=Sing _ _ _ _ 35 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 - - PUNCT : _ _ _ _ SpaceAfter=No 37 acetate acetate NOUN NN Number=Sing _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 or or CCONJ CC _ _ _ _ _ 42 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 LPS LPS INTJ UH _ _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9285 # text = Document 0030011776 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011776 0030011776 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9286 # text = Tissue-specific activity of the gammac chain gene promoter depends upon an Ets binding site and is regulated by GA-binding protein. 1 Tissue- Tissue- SYM NFP _ _ _ _ SpaceAfter=No 2 specific specific ADJ JJ Degree=Pos _ _ _ _ 3 activity activity NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 gammac gammac NOUN NN Number=Sing _ _ _ _ 7 chain chain NOUN NN Number=Sing _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 depends depend VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 upon upon ADP IN _ _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 Ets Ets PROPN NNPS Number=Plur _ _ _ _ 14 binding binding VERB VBG VerbForm=Ger _ _ _ _ 15 site site NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 GA Ga NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 binding binding VERB VBG VerbForm=Ger _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9287 # text = The gammac chain is a subunit of multiple cytokine receptors (interleukin (IL)-2, IL-4, IL-7, IL-9, and IL-15), the expression of which is restricted to hematopoietic lineages. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 gammac gammac NOUN NN Number=Sing _ _ _ _ 3 chain chain NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 subunit subunit NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 9 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 10 receptors receptor NOUN NNS Number=Plur _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 15 15 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 expression expression NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 which which PRON WDT PronType=Rel _ _ _ _ 41 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 42 restricted restrict VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 43 to to ADP IN _ _ _ _ _ 44 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 45 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 9288 # text = A defect in gammac leads to the X-linked severe combined immunodeficiency characterized by a block in T cell differentiation. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 defect defect NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 gammac gammac ADJ JJ Degree=Pos _ _ _ _ 5 leads lead NOUN NNS Number=Plur _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 X x PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 severe severe ADJ JJ Degree=Pos _ _ _ _ 12 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 14 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 block block NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 9289 # text = In order to better characterize the human gammac promoter and define the minimal tissue-specific promoter region, progressive 5'-deletion constructs of a segment extending 1053 base pairs upstream of the major transcription start site were generated and tested for promoter activity in various hematopoietic and nonhematopoietic cell types. 1 In in ADP IN _ _ _ _ _ 2 order order NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 better better ADV RBR Degree=Cmp _ _ _ _ 5 characterize characterize VERB VB VerbForm=Inf _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 gammac gammac NOUN NN Number=Sing _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 define define VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 14 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 progressive progressive ADJ JJ Degree=Pos _ _ _ _ 21 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ' ' NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 - - SYM SYM _ _ _ _ SpaceAfter=No 24 deletion deletion NOUN NN Number=Sing _ _ _ _ 25 constructs construct NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 segment segment NOUN NN Number=Sing _ _ _ _ 29 extending extend VERB VBG VerbForm=Ger _ _ _ _ 30 1053 1053 NUM CD NumType=Card _ _ _ _ 31 base base NOUN NN Number=Sing _ _ _ _ 32 pairs pair NOUN NNS Number=Plur _ _ _ _ 33 upstream upstream NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 major major ADJ JJ Degree=Pos _ _ _ _ 37 transcription transcription NOUN NN Number=Sing _ _ _ _ 38 start start NOUN NN Number=Sing _ _ _ _ 39 site site NOUN NN Number=Sing _ _ _ _ 40 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 41 generated generate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 for for ADP IN _ _ _ _ _ 45 promoter promoter NOUN NN Number=Sing _ _ _ _ 46 activity activity NOUN NN Number=Sing _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 various various ADJ JJ Degree=Pos _ _ _ _ 49 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 nonhematopoietic nonhematopoietic ADJ JJ Degree=Pos _ _ _ _ 52 cell cell NOUN NN Number=Sing _ _ _ _ 53 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 9290 # text = The -1053/+34 construct allowed promoter activity only in cells of hematopoietic origin, and tissue specificity was conserved in all other constructs tested. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 1053/+34 1053/+34 NUM CD NumType=Card _ _ _ _ 4 construct construct NOUN NN Number=Sing _ _ _ _ 5 allowed allow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 promoter promoter NOUN NN Number=Sing _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 only only ADV RB _ _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 13 origin origin NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 tissue tissue ADJ JJ Degree=Pos _ _ _ _ 17 specificity specificity NOUN NN Number=Sing _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 conserved conserve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 all all DET DT _ _ _ _ _ 22 other other ADJ JJ Degree=Pos _ _ _ _ 23 constructs construct NOUN NNS Number=Plur _ _ _ _ 24 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 9291 # text = The region downstream of -90 appeared critical for basal promoter activity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 region region NOUN NN Number=Sing _ _ _ _ 3 downstream downstream NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 90 90 NUM CD NumType=Card _ _ _ _ 7 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 critical critical ADJ JJ Degree=Pos _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 basal basal ADJ JJ Degree=Pos _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 9292 # text = It contains two potential Ets binding sites conserved in the murine gammac promoter gene, one of which was found essential for functional promoter activity as determined by mutational analysis. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 two two NUM CD NumType=Card _ _ _ _ 4 potential potential ADJ JJ Degree=Pos _ _ _ _ 5 Ets Et NOUN NNS Number=Plur _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 sites site NOUN NNS Number=Plur _ _ _ _ 8 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 murine murine NOUN NN Number=Sing _ _ _ _ 12 gammac gammac NOUN NN Number=Sing _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 one one NUM CD NumType=Card _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 essential essential ADJ JJ Degree=Pos _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 functional functional ADJ JJ Degree=Pos _ _ _ _ 24 promoter promoter ADJ JJ Degree=Pos _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ _ 26 as as SCONJ IN _ _ _ _ _ 27 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 mutational mutational ADJ JJ Degree=Pos _ _ _ _ 30 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 9293 # text = The functional Ets binding site was found to bind Ets family proteins, principally GA-binding protein and Elf-1 and could be transactivated by GABPalpha and -beta synergistically. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 functional functional ADJ JJ Degree=Pos _ _ _ _ 3 Ets et PROPN NNPS Number=Plur _ _ _ _ 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 site site NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 bind bind VERB VB VerbForm=Inf _ _ _ _ 10 Ets Ets PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 11 family family NOUN NN Number=Sing _ _ _ _ 12 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 principally principally ADV RB _ _ _ _ _ 15 GA ga NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 binding binding VERB VBG VerbForm=Ger _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 Elf Elf NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 could could AUX MD VerbForm=Fin _ _ _ _ 25 be be AUX VB VerbForm=Inf _ _ _ _ 26 transactivated transactivate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 GAB GAB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 Palpha Palpha PROPN NNP Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 beta beof NOUN NN Number=Sing _ _ _ _ 33 synergistically synergistically ADV RB _ _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 9294 # text = These results indicate that, as already reported for the IL2Rbeta promoter, GA-binding protein is an essential component of gammac basal promoter activity. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 as as SCONJ IN _ _ _ _ _ 7 already already ADV RB _ _ _ _ _ 8 reported report VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 IL2 IL2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 Rbeta Rbeta PROPN NNP Number=Sing _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 GA Ga NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 binding binding VERB VBG VerbForm=Ger _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 essential essential ADJ JJ Degree=Pos _ _ _ _ 22 component component NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 gammac gammac NOUN NN Number=Sing _ _ _ _ 25 basal basal NOUN NN Number=Sing _ _ _ _ 26 promoter promoter NOUN NN Number=Sing _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 9295 # text = Although GABP expression is not restricted to the hematopoietic lineage, its interaction with other specific factors may contribute to the tissue-specific expression of the gammac gene. 1 Although although SCONJ IN _ _ _ _ _ 2 GABP GABP PROPN NNP Number=Sing _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 restricted restrict VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 10 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 interaction interaction NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 other other ADJ JJ Degree=Pos _ _ _ _ 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 factors factor NOUN NNS Number=Plur _ _ _ _ 18 may may AUX MD VerbForm=Fin _ _ _ _ 19 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 gammac gammac ADJ JJ Degree=Pos _ _ _ _ 29 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9296 # text = Document 0030011779 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011779 0030011779 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9297 # text = Transcriptional activation of the vascular cell adhesion molecule-1 gene in T lymphocytes expressing human T-cell leukemia virus type 1 Tax protein. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 8 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 15 expressing express VERB VBG VerbForm=Ger _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 20 virus virus NOUN NN Number=Sing _ _ _ _ 21 type type NOUN NN Number=Sing _ _ _ _ 22 1 1 NUM CD NumType=Card _ _ _ _ 23 Tax tax NOUN NN Number=Sing _ _ _ _ 24 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9298 # text = Recruitment and extravasation of T cells through the blood-brain barrier are favored by adhesion molecule-mediated interactions of circulating T cells with endothelial cells. 1 Recruitment recruitment NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 extravasation extravasation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 through through ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 blood blood NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 brain brain NOUN NN Number=Sing _ _ _ _ 12 barrier barrier NOUN NN Number=Sing _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 favored favore VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 17 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 interactions interaction NOUN NNS Number=Plur _ _ _ _ 21 of of SCONJ IN _ _ _ _ _ 22 circulating circulate VERB VBG VerbForm=Ger _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 9299 # text = Since a common pathological finding in human T-cell leukemia virus type 1 (HTLV-1)-associated diseases is the infiltration of HTLV-1-infected T lymphocytes into various organs, we have looked for the profile of adhesion molecules expressed by HTLV-1-transformed T cells. 1 Since since ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 common common ADJ JJ Degree=Pos _ _ _ _ 4 pathological pathological ADJ JJ Degree=Pos _ _ _ _ 5 finding finding NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 11 virus virus NOUN NN Number=Sing _ _ _ _ 12 type type NOUN NN Number=Sing _ _ _ _ 13 1 1 NUM CD NumType=Card _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 X LS _ _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 -associated -associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 diseases diseasis NOUN NNS Number=Plur _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 infiltration infiltration NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 T t PROPN NNP Number=Sing _ _ _ _ 31 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 into into ADP IN _ _ _ _ _ 33 various various ADJ JJ Degree=Pos _ _ _ _ 34 organs organ NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 37 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 38 looked look VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 for for ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 profile profile NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 44 molecules molecule NOUN NNS Number=Plur _ _ _ _ 45 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 by by ADP IN _ _ _ _ _ 47 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 52 T t PROPN NNP Number=Sing _ _ _ _ 53 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 9300 # text = Flow cytometry analysis indicated that these cells were expressing high levels of vascular cell adhesion molecule 1 (VCAM-1 [CD106]), a 110-kDa member of the immunoglobulin gene superfamily, first identified on endothelial cells stimulated with inflammatory cytokines. 1 Flow flow ADJ JJ Degree=Pos _ _ _ _ 2 cytometry cytometry NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 expressing expresse VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 10 high high ADJ JJ Degree=Pos _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 16 molecule molecule NOUN NN Number=Sing _ _ _ _ 17 1 1 NUM CD NumType=Card _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 CD106 CD106 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 110 110 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 -kDa -kDa NOUN NN Number=Sing _ _ _ _ 30 member member NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 34 gene gene NOUN NN Number=Sing _ _ _ _ 35 superfamily superfamily ADV RB _ _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 first first ADV RB _ _ _ _ _ 38 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 on on ADP IN _ _ _ _ _ 40 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ _ 42 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 with with ADP IN _ _ _ _ _ 44 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 45 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 9301 # text = This adhesion molecule was also expressed by T cells obtained from one patient with HTLV-1-associated myelopathy/tropical spastic paraparesis but not by activated T cells isolated from one normal blood donor. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 3 molecule molecule NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 obtained obtain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 one one NUM CD NumType=Card _ _ _ _ 13 patient patient NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 myelopathy myelopathy NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 tropical tropical ADJ JJ Degree=Pos _ _ _ _ 23 spastic spastic ADJ JJ Degree=Pos _ _ _ _ 24 paraparesis paraparesis NOUN NN Number=Sing _ _ _ _ 25 but but CCONJ CC _ _ _ _ _ 26 not not PART RB _ _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 T t PROPN NNP Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 from from ADP IN _ _ _ _ _ 33 one one NUM CD NumType=Card _ _ _ _ 34 normal normal ADJ JJ Degree=Pos _ _ _ _ 35 blood blood NOUN NN Number=Sing _ _ _ _ 36 donor donor NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 9302 # text = The role of the viral trans-activator Tax protein in the induction of VCAM-1 was first indicated by the detection of this adhesion molecule on Jurkat T-cell clones stably expressing the tax gene. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 viral viral ADJ JJ Degree=Pos _ _ _ _ 6 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 activator activator NOUN NN Number=Sing _ _ _ _ 9 Tax tax NOUN NN Number=Sing _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 induction induction NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 first first ADV RB _ _ _ _ _ 20 indicated indicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 detection detection NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 26 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 27 molecule molecule NOUN NN Number=Sing _ _ _ _ 28 on on ADP IN _ _ _ _ _ 29 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 30 T- T- PUNCT , _ _ _ _ SpaceAfter=No 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 clones clone NOUN NNS Number=Plur _ _ _ _ 33 stably stably ADV RB _ _ _ _ _ 34 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 tax tax NOUN NN Number=Sing _ _ _ _ 37 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 9303 # text = The effect of Tax on VCAM-1 gene transcription was next confirmed in JPX-9 cells, a subclone of Jurkat cells, carrying the tax sequences under the control of an inducible promoter. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Tax tax PROPN NNP Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 next next ADV RB _ _ _ _ _ 13 confirmed confirm VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 JPX JPX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 9 9 NUM CD NumType=Card _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 subclone subclone NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 tax tax NOUN NN Number=Sing _ _ _ _ 29 sequences sequence NOUN NNS Number=Plur _ _ _ _ 30 under under ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 control control NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 36 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 9304 # text = Furthermore, deletion and mutation analyses of the VCAM-1 promoter performed with chloramphenicol acetyltransferase constructs revealed that Tax was trans activating the VCAM-1 promoter via two NF-kappaB sites present at bp -72 and -57 in the VCAM-1 gene promoter, with both of them being required for the Tax-induced expression of this adhesion molecule. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 deletion deletion NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 mutation mutation NOUN NN Number=Sing _ _ _ _ 6 analyses analysis NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 performed perform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 16 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 17 constructs constructs NOUN NNS Number=Plur _ _ _ _ 18 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 Tax Tax PROPN NNP Number=Sing _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 trans tran NOUN NNS Number=Plur _ _ _ _ 23 activating activat VERB VBG VerbForm=Ger _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ _ 29 via via ADP IN _ _ _ _ _ 30 two two NUM CD NumType=Card _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 34 sites site NOUN NNS Number=Plur _ _ _ _ 35 present present VERB VB VerbForm=Inf _ _ _ _ 36 at at ADP IN _ _ _ _ _ 37 bp bp NOUN NN Number=Sing _ _ _ _ 38 - - PUNCT , _ _ _ _ SpaceAfter=No 39 72 72 NUM CD NumType=Card _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 - - SYM SYM _ _ _ _ SpaceAfter=No 42 57 57 NUM CD NumType=Card _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ _ 48 gene gene NOUN NN Number=Sing _ _ _ _ 49 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 , , PUNCT , _ _ _ _ _ 51 with with ADP IN _ _ _ _ _ 52 both both DET DT _ _ _ _ _ 53 of of ADP IN _ _ _ _ _ 54 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ _ 55 being be AUX VBG VerbForm=Ger _ _ _ _ 56 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 57 for for ADP IN _ _ _ _ _ 58 the the DET DT Definite=Def|PronType=Art _ _ _ _ 59 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 61 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 62 expression expression NOUN NN Number=Sing _ _ _ _ 63 of of ADP IN _ _ _ _ _ 64 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 65 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 66 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 67 . . PUNCT . _ _ _ _ _ # sent_id = 9305 # text = Finally, gel mobility shift assays demonstrated the nuclear translocation of proteins specifically bound to these two NF-kappaB motifs, confirming that VCAM-1 was induced on Tax-expressing cells in a kappaB-dependent manner. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 gel gel VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 mobility mobility NOUN NN Number=Sing _ _ _ _ 5 shift shift NOUN NN Number=Sing _ _ _ _ 6 assays assays NOUN NNS Number=Plur _ _ _ _ 7 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 translocation translocation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 proteins protein NOUN NNS Number=Plur _ _ _ _ 13 specifically specifically ADV RB _ _ _ _ _ 14 bound bound ADJ JJ Degree=Pos _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 17 two two NUM CD NumType=Card _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 confirming confirm VERB VBG VerbForm=Ger _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - SYM SYM _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 29 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 on on ADP IN _ _ _ _ _ 31 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 expressing express VERB VBG VerbForm=Ger _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 40 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 9306 # text = Collectively, these results therefore suggest that the exclusive Tax-induced expression of VCAM-1 on T cells may represent a pivotal event in the progression of HTLV-1-associated diseases. 1 Collectively collectively ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 therefore therefore ADV RB _ _ _ _ _ 6 suggest suggest VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 exclusive exclusive ADJ JJ Degree=Pos _ _ _ _ 10 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 may may AUX MD VerbForm=Fin _ _ _ _ 22 represent represent VERB VB VerbForm=Inf _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 pivotal pivotal ADJ JJ Degree=Pos _ _ _ _ 25 event event NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 progression progression NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9307 # text = Document 0030011783 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011783 0030011783 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9308 # text = Rel/NF-kappa B transcription factors and the control of apoptosis. 1 Rel/NF Rel/nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factors factor NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 control control NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9309 # text = The process of apoptosis is used to eliminate unwanted cells from a wide variety of organisms. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 process process NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 eliminate eliminate VERB VB VerbForm=Inf _ _ _ _ 9 unwanted unwanted ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 wide wide ADJ JJ Degree=Pos _ _ _ _ 14 variety variety NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 organisms organism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 9310 # text = Various extracellular signals, often converging in common intracellular pathways, can induce apoptosis in a cell-type-specific fashion. 1 Various various ADJ JJ Degree=Pos _ _ _ _ 2 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 3 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 often often ADV RB _ _ _ _ _ 6 converging converge VERB VBG VerbForm=Ger _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 common common ADJ JJ Degree=Pos _ _ _ _ 9 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 10 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 can can AUX MD VerbForm=Fin _ _ _ _ 13 induce induce VERB VB VerbForm=Inf _ _ _ _ 14 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 type- type- SYM NFP _ _ _ _ SpaceAfter=No 20 specific specific ADJ JJ Degree=Pos _ _ _ _ 21 fashion fashion NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 9311 # text = Recent work from several laboratories has demonstrated that Rel/NF-kappa B transcription factors regulate apoptosis in many cell types. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 work work NOUN NN Number=Sing _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 several several ADJ JJ Degree=Pos _ _ _ _ 5 laboratories laboratory NOUN NNS Number=Plur _ _ _ _ 6 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ 14 B b PROPN NNP Number=Sing _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factors factor NOUN NNS Number=Plur _ _ _ _ 17 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 many many ADJ JJ Degree=Pos _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 9312 # text = In most cells, Rel/NF-kappa B transcription factors appear to mediate survival signals that protect cells from apoptosis; however, under some circumstances, activation of these factors may also promote apoptosis. 1 In in ADP IN _ _ _ _ _ 2 most most ADJ JJS Degree=Sup _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 / / PUNCT , _ _ _ _ SpaceAfter=No 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 appear appear VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 16 survival survival NOUN NN Number=Sing _ _ _ _ 17 signals signal NOUN NNS Number=Plur _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 protect protect VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ; ; PUNCT , _ _ _ _ _ 24 however however ADV RB _ _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 under under ADP IN _ _ _ _ _ 27 some some DET DT _ _ _ _ _ 28 circumstances circumstance NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 33 factors factor NOUN NNS Number=Plur _ _ _ _ 34 may may AUX MD VerbForm=Fin _ _ _ _ 35 also also ADV RB _ _ _ _ _ 36 promote promote VERB VB VerbForm=Inf _ _ _ _ 37 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9313 # text = Document 0030011790 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011790 0030011790 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9314 # text = Reactive oxygen species and antioxidants in inflammatory diseases. 1 Reactive Reactive ADJ JJ Degree=Pos _ _ _ _ 2 oxygen oxygen ADJ JJ Degree=Pos _ _ _ _ 3 species species NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 8 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9315 # text = This paper aims to review the role of free radical-induced tissue damage and antioxidant defence mechanisms in inflammatory diseases that involve pathogenic processes similar to the periodontal diseases. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 paper paper NOUN NN Number=Sing _ _ _ _ 3 aims aim VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 review review VERB VB VerbForm=Inf _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 free free ADJ JJ Degree=Pos _ _ _ _ 10 radical radical ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 tissue tissue NOUN NN Number=Sing _ _ _ _ 14 damage damage NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 antioxidant antioxidant ADJ JJ Degree=Pos _ _ _ _ 17 defence defence NOUN NN Number=Sing _ _ _ _ 18 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 21 diseases diseasis NOUN NNS Number=Plur _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 involve involve VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 pathogenic pathogenic NOUN NN Number=Sing _ _ _ _ 25 processes process NOUN NNS Number=Plur _ _ _ _ 26 similar similar ADJ JJ Degree=Pos _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 periodontal periodontal ADJ JJ Degree=Pos _ _ _ _ 30 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 9316 # text = There is a clearly defined and substantial role for free radicals or reactive oxygen species (ROS) in periodontitis, but little research has been performed in this area. 1 There there PRON EX _ _ _ _ _ 2 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 clearly clearly ADV RB _ _ _ _ _ 5 defined define VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 substantial substantial ADJ JJ Degree=Pos _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 free free ADJ JJ Degree=Pos _ _ _ _ 11 radicals radical NOUN NNS Number=Plur _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 14 oxygen oxygen ADJ JJ Degree=Pos _ _ _ _ 15 species species NOUN NNS Number=Plur _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 ROS Ro NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 periodontitis periodontitis NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 little little ADJ JJ Degree=Pos _ _ _ _ 24 research research NOUN NN Number=Sing _ _ _ _ 25 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 27 performed perform VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 30 area area NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 9317 # text = This paper reviews the considerable data available relating ROS activity and antioxidant defence to inflammatory diseases and attempts to draw parallels with periodontitis, in an effort to stimulate more periodontal research in this important area. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 paper paper NOUN NN Number=Sing _ _ _ _ 3 reviews review VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 considerable considerable ADJ JJ Degree=Pos _ _ _ _ 6 data data NOUN NN Number=Sing _ _ _ _ 7 available available ADJ JJ Degree=Pos _ _ _ _ 8 relating relat VERB VBG VerbForm=Ger _ _ _ _ 9 ROS Ros ADJ JJ Degree=Pos _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 antioxidant antioxidant ADJ JJ Degree=Pos _ _ _ _ 13 defence defence NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 16 diseases diseasis NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 attempts attempt NOUN NNS Number=Plur _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 draw draw VERB VB VerbForm=Inf _ _ _ _ 21 parallels parallel NOUN NNS Number=Plur _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 periodontitis periodontitis NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 effort effort NOUN NN Number=Sing _ _ _ _ 28 to to PART TO _ _ _ _ _ 29 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 30 more more ADV RBR _ _ _ _ _ 31 periodontal periodontal ADJ JJ Degree=Pos _ _ _ _ 32 research research NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 35 important important ADJ JJ Degree=Pos _ _ _ _ 36 area area NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 9318 # text = The recent discovery of the transcription factor nuclear factor kappa B (NF-kappa B) is reviewed and several potential pathways for cytokine-induced periodontal tissue damage, mediated by NF-kappa B1 are discussed. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 recent recent ADJ JJ Degree=Pos _ _ _ _ 3 discovery discovery NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 reviewed review VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 several several ADJ JJ Degree=Pos _ _ _ _ 22 potential potential ADJ JJ Degree=Pos _ _ _ _ 23 pathways pathway NOUN NNS Number=Plur _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 periodontal periodontal ADJ JJ Degree=Pos _ _ _ _ 29 tissue tissue NOUN NN Number=Sing _ _ _ _ 30 damage damage NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 kappa kappa PROPN NNP Number=Sing _ _ _ _ 37 B1 b1 PROPN NNP Number=Sing _ _ _ _ 38 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 39 discussed discuss VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 9319 # text = Emphasis is placed on cytokines that have been studied in periodontitis, principally TNF-alpha, IL-1, IL-6, IL-8 and beta-interferon. 1 Emphasis Emphasis PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 placed place VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 9 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 periodontitis periodontitis NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 principally principally ADV RB _ _ _ _ _ 14 TNF Tnf ADV RB _ _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 alpha alpha INTJ UH _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 IL il ADV RB _ _ _ _ SpaceAfter=No 27 - - SYM SYM _ _ _ _ SpaceAfter=No 28 8 8 NUM CD NumType=Card _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 9320 # text = The link between cellular production of such important mediators of inflammation and the antioxidant (AO) thiols, cysteine and reduced glutathione (GSH), is discussed and it is hypothesised that NF-kappa B antagonists may offer important therapeutic benefits. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 link link NOUN NN Number=Sing _ _ _ _ 3 between between ADP IN _ _ _ _ _ 4 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 5 production production NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 such such ADJ JJ Degree=Pos _ _ _ _ 8 important important ADJ JJ Degree=Pos _ _ _ _ 9 mediators mediator NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 antioxidant antioxidant NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 AO AO INTJ UH _ _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 thiols thiol INTJ UH _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 cysteine cysteine VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 glutathione glutathione NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 GSH GSH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 discussed discussed VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 32 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 hypothesised hypothesise VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 34 that that SCONJ IN _ _ _ _ _ 35 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 kappa kappa NOUN NN Number=Sing _ _ _ _ 38 B b NOUN NN Number=Sing _ _ _ _ 39 antagonists antagonist NOUN NNS Number=Plur _ _ _ _ 40 may may AUX MD VerbForm=Fin _ _ _ _ 41 offer offer VERB VB VerbForm=Inf _ _ _ _ 42 important important ADJ JJ Degree=Pos _ _ _ _ 43 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 44 benefits benefit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9321 # text = Document 0030011791 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011791 0030011791 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9322 # text = A novel interferon regulatory factor family transcription factor, ICSAT/Pip/LSIRF, that negatively regulates the activity of interferon-regulated genes. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 novel novel NOUN NN Number=Sing _ _ _ _ 3 interferon interferon ADP IN _ _ _ _ _ 4 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 family family NOUN NN Number=Sing _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 ICSAT ICSAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 Pip/LSIRF Pip/LSIRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 negatively negatively ADV RB _ _ _ _ _ 16 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9323 # text = We have isolated a novel cDNA clone encoding interferon (IFN) consensus sequence-binding protein in adult T-cell leukemia cell line or activated T cells (ICSAT); this protein is the human homolog of the recently cloned Pip/LSIRF. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 novel novel NOUN NN Number=Sing _ _ _ _ 6 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 7 clone clone NOUN NN Number=Sing _ _ _ _ 8 encoding encoding VERB VBG VerbForm=Ger _ _ _ _ 9 interferon interferon NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 consensus consensus NOUN NN Number=Sing _ _ _ _ 14 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 adult adult NOUN NN Number=Sing _ _ _ _ 20 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 line line NOUN NN Number=Sing _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 T t PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 ICSAT ICSAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 ; ; PUNCT , _ _ _ _ _ 33 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 34 protein protein NOUN NN Number=Sing _ _ _ _ 35 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 human human ADJ JJ Degree=Pos _ _ _ _ 38 homolog homolog NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 recently recently ADV RB _ _ _ _ _ 42 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 Pip/LSIRF Pip/LSIRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 9324 # text = ICSAT is structurally most closely related to the previously cloned ICSBP, a member of the IFN regulatory factor (IRF) family of proteins that binds to interferon consensus sequences (ICSs) found in many promoters of the IFN-regulated genes. 1 ICSAT Icsat PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 structurally structurally ADV RB _ _ _ _ _ 4 most most ADV RBS _ _ _ _ _ 5 closely closely ADV RB _ _ _ _ _ 6 related related ADJ JJ Degree=Pos _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 previously previously ADV RB _ _ _ _ _ 10 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 ICSBP ICSBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 member member NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 IFN Ifn PROPN NNP Number=Sing _ _ _ _ 18 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 family family NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 proteins protein NOUN NNS Number=Plur _ _ _ _ 26 that that PRON WDT PronType=Rel _ _ _ _ 27 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 to to PART TO _ _ _ _ _ 29 interferon interferon VERB VB VerbForm=Inf _ _ _ _ 30 consensus consensus NOUN NN Number=Sing _ _ _ _ 31 sequences sequence NOUN NNS Number=Plur _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 ICSs ICSs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 many many ADJ JJ Degree=Pos _ _ _ _ 38 promoters promoter NOUN NNS Number=Plur _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 9325 # text = Among T-cell lines investigated, ICSAT was abundantly expressed in human T-cell leukemia virus type 1 (HTLV-1)-infected T cells. 1 Among among ADP IN _ _ _ _ _ 2 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 lines line NOUN NNS Number=Plur _ _ _ _ 5 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 ICSAT ICSAT PROPN NNP Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 abundantly abundantly ADV RB _ _ _ _ _ 10 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ _ 17 type type NOUN NN Number=Sing _ _ _ _ 18 1 1 NUM CD NumType=Card _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 T t PROPN NNP Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 9326 # text = When the HTLV-1 tax gene was expressed or phorbol myristake acetate-A23187 stimulation was used, ICSAT expression was induced in Jurkat cells which otherwise do not express ICSAT. 1 When when ADV WRB PronType=Int _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 tax tax NOUN NN Number=Sing _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 expressed express ADJ JJ Degree=Pos _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 12 myristake myristake NOUN NN Number=Sing _ _ _ _ 13 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT : _ _ _ _ SpaceAfter=No 15 A23187 A23187 NUM CD NumType=Card _ _ _ _ 16 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 ICSAT ICSAT SCONJ IN _ _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 which which PRON WDT PronType=Rel _ _ _ _ 28 otherwise otherwise ADV RB _ _ _ _ _ 29 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 not not PART RB _ _ _ _ _ 31 express express VERB VB VerbForm=Inf _ _ _ _ 32 ICSAT Icsat PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 9327 # text = When the binding of ICSAT to four different ICSs was tested, the relative differences in binding affinities for those ICSs were determined. 1 When when ADV WRB PronType=Int _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 binding binding NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 ICSAT ICSAT PROPN NNP Number=Sing _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 four four NUM CD NumType=Card _ _ _ _ 8 different different ADJ JJ Degree=Pos _ _ _ _ 9 ICSs ICS NOUN NNS Number=Plur _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 tested test VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 relative relative ADJ JJ Degree=Pos _ _ _ _ 15 differences difference NOUN NNS Number=Plur _ _ _ _ 16 in in SCONJ IN _ _ _ _ _ 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 affinities affinity NOUN NNS Number=Plur _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 those those DET DT Number=Plur|PronType=Dem _ _ _ _ 21 ICSs ICSs NOUN NNS Number=Plur _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 determined determine ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 9328 # text = To study the functional role of ICSAT, we performed cotransfection experiments with the human embryonal carcinoma cell line N-Tera2. 1 To to PART TO _ _ _ _ _ 2 study study VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 functional functional ADJ JJ Degree=Pos _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 ICSAT ICSAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 10 performed perform VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 cotransfection cotransfection NOUN NN Number=Sing _ _ _ _ 12 experiments experiment NOUN NNS Number=Plur _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 embryonal embryonal ADJ JJ Degree=Pos _ _ _ _ 17 carcinoma carcinoma NOUN NN Number=Sing _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 line line NOUN NN Number=Sing _ _ _ _ 20 N and PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 Tera2 tera2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 9329 # text = ICSAT was demonstrated to possess repressive function over the gene activation induced by IFN stimulation or by IRF-1 cotransfection. 1 ICSAT ICSAT PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 possess possess VERB VB VerbForm=Inf _ _ _ _ 6 repressive repressive ADJ JJ Degree=Pos _ _ _ _ 7 function function NOUN NN Number=Sing _ _ _ _ 8 over over ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 IFN IFN PROPN NNP Number=Sing _ _ _ _ 15 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 cotransfection cotransfection NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 9330 # text = Such repressive function is similar to that seen in IRF-2 or ICSBP. 1 Such such DET PDT _ _ _ _ _ 2 repressive repressive ADJ JJ Degree=Pos _ _ _ _ 3 function function NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 similar similar ADJ JJ Degree=Pos _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 8 seen see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 ICSBP Icsbp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 9331 # text = However, we have found that ICSAT has a different repressive effect from that of IRF-2 or ICSBP in some IFN-responsive reporter constructs. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 ICSAT Icsat PRON WP PronType=Int _ _ _ _ 8 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 different different ADJ JJ Degree=Pos _ _ _ _ 11 repressive repressive ADJ JJ Degree=Pos _ _ _ _ 12 effect effect NOUN NN Number=Sing _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 ICSBP Icsbp NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 some some DET DT _ _ _ _ _ 23 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 26 reporter reporter NOUN NN Number=Sing _ _ _ _ 27 constructs construct NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 9332 # text = These results suggest that a novel mechanism of gene regulation by "differential repression" is used by multiple members of repressor proteins with different repressive effects on the IFN-responsive genes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 novel novel NOUN NN Number=Sing _ _ _ _ 7 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 regulation regulation NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 " " PUNCT `` _ _ _ _ SpaceAfter=No 13 differential differential ADJ JJ Degree=Pos _ _ _ _ 14 repression repression NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 " " PUNCT '' _ _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 20 members member NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 repressor repressor NOUN NN Number=Sing _ _ _ _ 23 proteins protein NOUN NNS Number=Plur _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 different different ADJ JJ Degree=Pos _ _ _ _ 26 repressive repressive ADJ JJ Degree=Pos _ _ _ _ 27 effects effect NOUN NNS Number=Plur _ _ _ _ 28 on on ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 33 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9333 # text = Document 0030011794 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011794 0030011794 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9334 # text = Transcriptional regulation during myelopoiesis. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 during during ADP IN _ _ _ _ _ 4 myelopoiesis myelopoiesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 5 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9335 # text = The coordinated production of all blood cells from a common stem cell is a highly regulated process involving successive stages of commitment and differentiation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 coordinated coordinate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 production production NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 all all DET DT _ _ _ _ _ 6 blood blood NOUN NN Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 common common ADJ JJ Degree=Pos _ _ _ _ 11 stem stem NOUN NN Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 highly highly ADV RB _ _ _ _ _ 16 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 process process NOUN NN Number=Sing _ _ _ _ 18 involving involve VERB VBG VerbForm=Ger _ _ _ _ 19 successive successive ADJ JJ Degree=Pos _ _ _ _ 20 stages stage NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 commitment commitment NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 9336 # text = From analyses of mice deficient in transcription factor genes and from the characterizations of chromosome breakpoints in human leukemias, it has become evident that transcription factors are important regulators of hematopoiesis. 1 From from ADP IN _ _ _ _ _ 2 analyses analysis NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 mice mouse NOUN NNS Number=Plur _ _ _ _ 5 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 genes gene NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 characterizations characterization NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 chromosome chromosome DET DT _ _ _ _ _ 16 breakpoints breakpoint NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 leukemias leukemia NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 22 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 become become VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 evident evident ADJ JJ Degree=Pos _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 factors factor NOUN NNS Number=Plur _ _ _ _ 28 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 important important ADJ JJ Degree=Pos _ _ _ _ 30 regulators regulator NOUN NNS Number=Plur _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 hematopoiesis hematopoiesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 9337 # text = During myelopoiesis, which includes the development of granulocytic and monocytic lineages, transcription factors from several families are active, including AML1/CBF beta, C/EBP, Ets, c-Myb, HOX, and MZF-1. 1 During during ADP IN _ _ _ _ _ 2 myelopoiesis myelopoiesis PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 includes include VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 development development NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 12 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ _ 16 from from ADP IN _ _ _ _ _ 17 several several ADJ JJ Degree=Pos _ _ _ _ 18 families family NOUN NNS Number=Plur _ _ _ _ 19 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 active active ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 including include VERB VBG VerbForm=Ger _ _ _ _ 23 AML1/ AML1ith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 24 CBF CBF PROPN NNP Number=Sing _ _ _ _ 25 beta beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 C/ c/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 28 EBP EBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 Ets ets PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 c- c- SYM NFP _ _ _ _ SpaceAfter=No 33 Myb Myb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 HOX HOX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 MZF MZF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 9338 # text = Few of these factors are expressed exclusively in myeloid cells; instead it appears that they cooperatively regulate transcription of myeloid-specific genes. 1 Few few PROPN NNP Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 factors factor NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 exclusively exclusively ADV RB _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 ; ; PUNCT , _ _ _ _ _ 12 instead instead ADV RB _ _ _ _ _ 13 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 14 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 17 cooperatively cooperatively ADV RB _ _ _ _ _ 18 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 myeloid myeloid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 specific specific ADJ JJ Degree=Pos _ _ _ _ 24 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 9339 # text = Here we discuss recent advances in transcriptional regulation during myelopoiesis. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 discuss discuss VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 recent recent ADJ JJ Degree=Pos _ _ _ _ 5 advances advance NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 8 regulation regulation NOUN NN Number=Sing _ _ _ _ 9 during during ADP IN _ _ _ _ _ 10 myelopoiesis myelopoiesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9340 # text = Document 0030011795 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011795 0030011795 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9341 # text = The role of Rel/NF-kappa B proteins in viral oncogenesis and the regulation of viral transcription. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 viral viral ADJ JJ Degree=Pos _ _ _ _ 13 oncogenesis oncogenesis NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 regulation regulation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 viral viral ADJ JJ Degree=Pos _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9342 # text = Rel/NF-kappa B is a ubiquitous transcription factor that consists of multiple polypeptide subunits, and is subject to complex regulatory mechanisms that involve protein-protein interactions, phosphorylation, ubiquitination, proteolytic degradation, and nucleocytoplasmic translocation. 1 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 / / PUNCT , _ _ _ _ SpaceAfter=No 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B b PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 consists consist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 16 polypeptide polypeptide NOUN NN Number=Sing _ _ _ _ 17 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 subject subject ADJ JJ Degree=Pos _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 complex complex VERB VB VerbForm=Inf _ _ _ _ 24 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 25 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 26 that that PRON WDT PronType=Rel _ _ _ _ 27 involve involve VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 29 protein protein NOUN NN Number=Sing _ _ _ _ 30 interactions interaction NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 ubiquitination ubiquitination NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 proteolytic proteolytic ADJ JJ Degree=Pos _ _ _ _ 37 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 nucleocytoplasmic nucleocytoplasmic ADJ JJ Degree=Pos _ _ _ _ 41 translocation translocation NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 9343 # text = The sophisticated control of Rel/NF-kappa B activity is not surprising since this transcription factor is involved in a wide array of cellular responses to extracellular cues, associated with growth, development, apoptosis, and pathogen invasion. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 sophisticated sophisticate ADJ JJ Degree=Pos _ _ _ _ 3 control control NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 / / PUNCT , _ _ _ _ SpaceAfter=No 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 surprising surprising ADJ JJ Degree=Pos _ _ _ _ 15 since since SCONJ IN _ _ _ _ _ 16 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 involved involved ADJ JJ Degree=Pos _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 wide wide ADJ JJ Degree=Pos _ _ _ _ 24 array array NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 27 responses response NOUN NNS Number=Plur _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 30 cues cue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 pathogen pathogen NOUN NN Number=Sing _ _ _ _ 42 invasion invasion NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 9344 # text = Thus, it is not unexpected that this versatile cellular homeostatic switch would be affected by a variety of viral pathogens, which have evolved mechanisms to utilize various aspects of Rel/NF-kappa B activity to facilitate their replication, cell survival and possibly evasion of immune responses. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 unexpected unexpect ADJ JJ Degree=Pos _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 9 versatile versatile NOUN NN Number=Sing _ _ _ _ 10 cellular celular ADJ JJ Degree=Pos _ _ _ _ 11 homeostatic homeostatic ADJ JJ Degree=Pos _ _ _ _ 12 switch switch NOUN NN Number=Sing _ _ _ _ 13 would would AUX MD VerbForm=Fin _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 variety variety NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 viral viral ADJ JJ Degree=Pos _ _ _ _ 21 pathogens pathogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 evolved evolve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 utilize utilize VERB VB VerbForm=Inf _ _ _ _ 29 various various ADJ JJ Degree=Pos _ _ _ _ 30 aspects aspect NOUN NNS Number=Plur _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 / / PUNCT , _ _ _ _ SpaceAfter=No 34 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 kappa kappa PROPN NNP Number=Sing _ _ _ _ 37 B b ADJ JJ Degree=Pos _ _ _ _ 38 activity activity NOUN NN Number=Sing _ _ _ _ 39 to to PART TO _ _ _ _ _ 40 facilitate facilitate VERB VB VerbForm=Inf _ _ _ _ 41 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 42 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 cell cell NOUN NN Number=Sing _ _ _ _ 45 survival survival NOUN NN Number=Sing _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 possibly possibly ADV RB _ _ _ _ _ 48 evasion evasion NOUN NN Number=Sing _ _ _ _ 49 of of ADP IN _ _ _ _ _ 50 immune immune ADJ JJ Degree=Pos _ _ _ _ 51 responses respons NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 9345 # text = This review will cover the molecular mechanisms that are utilized by mammalian oncogenic viruses to affect the activity of Rel/NF-kappa B transcription factors and the role of Rel/NF-kappa B in the regulation of viral gene expression and replication. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 review review NOUN NN Number=Sing _ _ _ _ 3 will will AUX MD VerbForm=Fin _ _ _ _ 4 cover cover VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 7 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 utilized utilize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 13 oncogenic oncogenic ADJ JJ Degree=Pos _ _ _ _ 14 viruses virus NOUN NNS Number=Plur _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 affect affect VERB VB VerbForm=Inf _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 factors factor NOUN NNS Number=Plur _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 role role NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 Rel/ Relith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 33 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 -kappa -kappa NOUN NN Number=Sing _ _ _ _ 35 B b NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 regulation regulation NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 viral viral ADJ JJ Degree=Pos _ _ _ _ 41 gene gene NOUN NN Number=Sing _ _ _ _ 42 expression expression NOUN NN Number=Sing _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9346 # text = Document 0030011800 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011800 0030011800 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9347 # text = Inhibition of cyclooxygenase-2 expression by 4-trifluoromethyl derivatives of salicylate, triflusal, and its deacetylated metabolite, 2-hydroxy-4-trifluoromethylbenzoic acid. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cyclooxygenase cyclooxygenase NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 trifluoromethyl trifluoromethyl NOUN NN Number=Sing _ _ _ _ 11 derivatives derivative NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 salicylate salicylate NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 triflusal triflusal NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 19 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 deacetylated deacetylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 metabolite metabolite NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 hydroxy hydroxy NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 trifluoromethylbenzoic trifluoromethylbenzoic ADJ JJ Degree=Pos _ _ _ _ 30 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9348 # text = The therapeutic potential of drugs that block the induction of cyclooxygenase-2 has been emphasized. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 3 potential potential NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 drugs drug NOUN NNS Number=Plur _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 block block VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 cyclooxygenase cyclooxygenase NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 16 emphasized emphasize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 9349 # text = When two 4-trifluoromethyl salicylate derivatives [2-acetoxy-4-trifluoromethyl-benzoic 1 When when ADV WRB PronType=Int _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 trifluoromethyl trifluoromethyl NOUN NN Number=Sing _ _ _ _ 6 salicylate salicylate NOUN NN Number=Sing _ _ _ _ 7 derivatives derivative NOUN NNS Number=Plur _ _ _ _ 8 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 acetoxy acetoxy NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 trifluoromethyl trifluoromethyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 -benzoic -benzoic NOUN NN Number=Sing _ _ _ _ # sent_id = 9350 # text = acid (triflusal) and its deacetylated metabolite 2-hydroxy-4-trifluoromethylbenzoic acid (HTB)] were compared with aspirin and sodium salicylate as cyclooxygenase-2 (COX-2) inhibitors, we observed that in bacterial lipopolysaccharide-activated human blood, triflusal, aspirin, and HTB, but not sodium salicylate, inhibited COX-2-mediated prostaglandin E2 (PGE2) production (IC50 = 0.16, 0.18, 0.39, and >10 mM, respectively). 1 acid acid ADJ JJ Degree=Pos _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 triflusal triflusal NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 7 deacetylated deacetylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 metabolite metabolite NOUN NN Number=Sing _ _ _ _ 9 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 hydroxy hydroxy NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 trifluoromethylbenzoic trifluoromethylbenzoic ADJ JJ Degree=Pos _ _ _ _ 16 acid acid NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 HTB HTB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 ] ] PUNCT -RRB- _ _ _ _ _ 21 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 compared compare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 aspirin aspirin NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 sodium sodium NOUN NN Number=Sing _ _ _ _ 27 salicylate salicylate NOUN NN Number=Sing _ _ _ _ 28 as as ADP IN _ _ _ _ _ 29 cyclooxygenase cyclooxygenase NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 COX Cox NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 40 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 41 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 44 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 human human ADJ JJ Degree=Pos _ _ _ _ 48 blood blood NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 triflusal triflusal NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 , , PUNCT , _ _ _ _ _ 52 aspirin aspirin NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 , , PUNCT , _ _ _ _ _ 54 and and CCONJ CC _ _ _ _ _ 55 HTB HTB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 56 , , PUNCT , _ _ _ _ _ 57 but but CCONJ CC _ _ _ _ _ 58 not not ADV RB _ _ _ _ _ 59 sodium sodium NOUN NN Number=Sing _ _ _ _ 60 salicylate salicylate NOUN NN Number=Sing _ _ _ SpaceAfter=No 61 , , PUNCT , _ _ _ _ _ 62 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 63 COX Cox NOUN NN Number=Sing _ _ _ SpaceAfter=No 64 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 65 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 66 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 67 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 68 prostaglandin prostaglandin NOUN NN Number=Sing _ _ _ _ 69 E2 E2 NUM CD NumType=Card _ _ _ _ 70 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 71 PGE2 PGE2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 72 ) ) PUNCT -RRB- _ _ _ _ _ 73 production production NOUN NN Number=Sing _ _ _ _ 74 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 75 IC50 IC50 NUM CD NumType=Card _ _ _ _ 76 = = SYM SYM _ _ _ _ _ 77 0.16 0.16 NUM CD NumType=Card _ _ _ SpaceAfter=No 78 , , PUNCT , _ _ _ _ _ 79 0.18 0.18 NUM CD NumType=Card _ _ _ SpaceAfter=No 80 , , PUNCT , _ _ _ _ _ 81 0.39 0.39 NUM CD NumType=Card _ _ _ SpaceAfter=No 82 , , PUNCT , _ _ _ _ _ 83 and and CCONJ CC _ _ _ _ _ 84 >10 >10 NUM CD NumType=Card _ _ _ _ 85 mM mm NOUN NN Number=Sing _ _ _ SpaceAfter=No 86 , , PUNCT , _ _ _ _ _ 87 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 88 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 89 . . PUNCT . _ _ _ _ _ # sent_id = 9351 # text = However, only triflusal and aspirin inhibited purified COX-2 enzyme. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 only only ADV RB _ _ _ _ _ 4 triflusal triflusal ADJ JJ Degree=Pos _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 aspirin aspirin ADJ JJ Degree=Pos _ _ _ _ 7 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 COX Cox NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 enzyme enzyme NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 9352 # text = To test this apparent discrepancy, we realized that HTB and triflusal (but neither aspirin nor salicylate) produced a concentration-dependent inhibition of COX-2 protein expression in peripheral human mononuclear cells. 1 To to PART TO _ _ _ _ _ 2 test test VERB VB VerbForm=Inf _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 apparent apparent ADJ JJ Degree=Pos _ _ _ _ 5 discrepancy discrepancy NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 8 realized realize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 10 HTB Htb NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 triflusal triflusal NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 but but CCONJ CC _ _ _ _ _ 15 neither neither DET DT _ _ _ _ _ 16 aspirin aspirin NOUN NN Number=Sing _ _ _ _ 17 nor nor CCONJ CC _ _ _ _ _ 18 salicylate salicylate NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 produced produce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 concentration concentration NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 25 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 COX cox PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 2 2 NUM CD NumType=Card _ _ _ _ 30 protein protein NOUN NN Number=Sing _ _ _ _ 31 expression expression NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 34 human human ADJ JJ Degree=Pos _ _ _ _ 35 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 9353 # text = This observation was further confirmed in a rat air pouch model in vivo, in which both aspirin and triflusal inhibited PGE2 production (ID50 = 18.9 and 11.4 mg/kg p.o., respectively) but only triflusal-treated animals showed a decrease in COX-2 expression. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 observation observation NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 further further ADV RB _ _ _ _ _ 5 confirmed confirm VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 rat rat NOUN NN Number=Sing _ _ _ _ 9 air air NOUN NN Number=Sing _ _ _ _ 10 pouch pouch NOUN NN Number=Sing _ _ _ _ 11 model model NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 both both DET DT _ _ _ _ _ 18 aspirin aspirin NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 triflusal triflusal NOUN NN Number=Sing _ _ _ _ 21 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 PGE2 PGE2 NUM CD NumType=Card _ _ _ _ 23 production production NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 ID50 ID50 NUM CD NumType=Card _ _ _ _ 26 = = SYM SYM _ _ _ _ _ 27 18.9 18.9 NUM CD NumType=Card _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 11.4 11.4 NUM CD NumType=Card _ _ _ _ 30 mg mg NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 / / PUNCT , _ _ _ _ SpaceAfter=No 32 kg kg NOUN NN Number=Sing _ _ _ _ 33 p.o. p.o. NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 but but CCONJ CC _ _ _ _ _ 38 only only ADV RB _ _ _ _ _ 39 triflusal triflusal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 animals animal NOUN NNS Number=Plur _ _ _ _ 43 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 44 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 45 decrease decrease NOUN NN Number=Sing _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 COX cox PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 2 2 NUM CD NumType=Card _ _ _ _ 50 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 9354 # text = This different behavior may be, at least in part, due to the ability of HTB and triflusal to block the activation of the transcription factor nuclear factor-kappaB to a higher extent than aspirin and sodium salicylate. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 different different ADJ JJ Degree=Pos _ _ _ _ 3 behavior behavior NOUN NN Number=Sing _ _ _ _ 4 may may AUX MD VerbForm=Fin _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 at at ADV RB _ _ _ _ _ 8 least least ADV RBS Degree=Sup _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 part part ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 due due ADP IN _ _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 ability ability NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 HTB HTB PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 triflusal triflusal ADJ JJ Degree=Pos _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 block block VERB VB VerbForm=Inf _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ _ 28 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 29 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappaB kappab NOUN NN Number=Sing _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 higher higher ADJ JJR Degree=Cmp _ _ _ _ 35 extent extent NOUN NN Number=Sing _ _ _ _ 36 than than ADP IN _ _ _ _ _ 37 aspirin aspirin NOUN NN Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 sodium sodium NOUN NN Number=Sing _ _ _ _ 40 salicylate salicylate NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 9355 # text = Thus, in addition to inhibiting the COX-2 activity at therapeutic concentrations, triflusal is able to block through its metabolite HTB the expression of new enzyme, and hence the resumption of PGE2 synthesis. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 addition addition NOUN NN Number=Sing _ _ _ _ 5 to to SCONJ IN _ _ _ _ _ 6 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 COX cox NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 at at ADP IN _ _ _ _ _ 13 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 14 concentrations concentration NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 triflusal triflusal NOUN NN Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 able able ADJ JJ Degree=Pos _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 block block VERB VB VerbForm=Inf _ _ _ _ 21 through through ADP IN _ _ _ _ _ 22 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 23 metabolite metabolite NOUN NN Number=Sing _ _ _ _ 24 HTB Htb VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 new new ADJ JJ Degree=Pos _ _ _ _ 29 enzyme enzyme NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 hence hence ADV RB _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 resumption resumption NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 PGE2 PGE2 NUM CD NumType=Card _ _ _ _ 37 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 9356 # text = Triflusal and HTB may exert beneficial effects in processes in which de novo COX-2 expression is involved and, in a broader sense, in pathological situations in which genes under nuclear factor-kappaB control are up-regulated. 1 Triflusal Triflusal PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 HTB HTB PROPN NNP Number=Sing _ _ _ _ 4 may may AUX MD VerbForm=Fin _ _ _ _ 5 exert exert VERB VB VerbForm=Inf _ _ _ _ 6 beneficial beneficial ADJ JJ Degree=Pos _ _ _ _ 7 effects effect NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 processes process NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 de de PROPN NNP Number=Sing _ _ _ _ 13 novo novo ADP IN _ _ _ _ _ 14 COX cox PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 involved involved ADJ JJ Degree=Pos _ _ _ _ 20 and and CCONJ CC _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 broader broader ADJ JJR Degree=Cmp _ _ _ _ 25 sense sense NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 pathological pathological ADJ JJ Degree=Pos _ _ _ _ 29 situations situation NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 which which PRON WDT PronType=Rel _ _ _ _ 32 genes gene VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 under under ADP IN _ _ _ _ _ 34 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 kappaB kappab NOUN NN Number=Sing _ _ _ _ 38 control control NOUN NN Number=Sing _ _ _ _ 39 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 40 up up ADV RB _ _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9357 # text = Document 0030011804 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011804 0030011804 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9358 # text = Transcriptional regulation of T lymphocyte development and function. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 6 development development NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9359 # text = The development and function of T lymphocytes are regulated tightly by signal transduction pathways that include specific cell-surface receptors, intracellular signaling molecules, and nuclear transcription factors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 development development NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 function function NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 tightly tightly ADV RB _ _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 signal signal NOUN NN Number=Sing _ _ _ _ 13 transduction transduction NOUN NN Number=Sing _ _ _ _ 14 pathways pathway NOUN NNS Number=Plur _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 include include VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 surface surface NOUN NN Number=Sing _ _ _ _ 21 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 24 signaling signaling NOUN NN Number=Sing _ _ _ _ 25 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 9360 # text = Since 1988, several families of functionally important T cell transcription factors have been identified. 1 Since since ADP IN _ _ _ _ _ 2 1988 1988 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 several several ADJ JJ Degree=Pos _ _ _ _ 5 families family NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 functionally functionally ADV RB _ _ _ _ _ 8 important important ADJ JJ Degree=Pos _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 15 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 9361 # text = These include the Ikaros, LKLF, and GATA3 zinc-finger proteins; the Ets, CREB/ATF, and NF-kappa B/Rel/NFAT transcription factors; the Stat proteins; and HMG box transcription factors such as LEF1, TCF1, and Sox4. 1 These these PRON DT Number=Plur|PronType=Dem _ _ _ _ 2 include include VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 Ikaros Ikaros PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 LKLF LKLF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 GATA3 GATA3 NUM CD NumType=Card _ _ _ _ 10 zinc zinc NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 finger finger NOUN NN Number=Sing _ _ _ _ 13 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 ; ; PUNCT , _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 Ets Et NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 / / PUNCT , _ _ _ _ SpaceAfter=No 20 ATF ATF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 / / PUNCT , _ _ _ _ SpaceAfter=No 28 Rel/NFAT Rel/nfat NOUN NN Number=Sing _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 ; ; PUNCT , _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 Stat Stat NOUN NN Number=Sing _ _ _ _ 34 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 ; ; PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 HMG Hmg NOUN NN Number=Sing _ _ _ _ 38 box box NOUN NN Number=Sing _ _ _ _ 39 transcription transcription NOUN NN Number=Sing _ _ _ _ 40 factors factor NOUN NNS Number=Plur _ _ _ _ 41 such such ADJ JJ Degree=Pos _ _ _ _ 42 as as ADP IN _ _ _ _ _ 43 LEF1 LEF1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 TCF1 TCF1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 Sox4 Sox4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 9362 # text = In this review, we summarize our current understanding of the transcriptional regulation of T cell development and function with particular emphasis on the results of recent gene targeting and transgenic experiments. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 review review NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 summarize summarize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 8 current current ADJ JJ Degree=Pos _ _ _ _ 9 understanding understanding NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 13 regulation regulation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 development development NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 function function NOUN NN Number=Sing _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 particular particular ADJ JJ Degree=Pos _ _ _ _ 22 emphasis emphasis NOUN NN Number=Sing _ _ _ _ 23 on on ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 results result NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 recent recent ADJ JJ Degree=Pos _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 targeting targeting NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 32 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 9363 # text = In addition to increasing our understanding of the molecular pathways that regulate T cell development and function, these results have suggested novel targets for genetic and pharmacological manipulation of T cell immunity. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 to to SCONJ IN _ _ _ _ _ 4 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 5 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 6 understanding understanding NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 10 pathways pathway NOUN NNS Number=Plur _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 T t NUM CD NumType=Card _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 development development NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 20 results result NOUN NNS Number=Plur _ _ _ _ 21 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 suggested suggest VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 novel novel ADJ JJ Degree=Pos _ _ _ _ 24 targets target NOUN NNS Number=Plur _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 pharmacological pharmacological ADJ JJ Degree=Pos _ _ _ _ 29 manipulation manipulation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 immunity immunity NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9364 # text = Document 0030011812 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011812 0030011812 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9365 # text = A novel mitogen-inducible gene product related to p50/p105-NF-kappa B participates in transactivation through a kappa B site. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 novel novel NOUN NN Number=Sing _ _ _ _ 3 mitogen mitogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 product product NOUN NN Number=Sing _ _ _ _ 8 related related ADJ JJ Degree=Pos _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 p50/p105 p50/p105 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 participates participate NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 19 through through ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 kappa kappa NOUN NN Number=Sing _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ _ 23 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9366 # text = A Rel-related, mitogen-inducible, kappa B-binding protein has been cloned as an immediate-early activation gene of human peripheral blood T cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 Rel-related Rel-related ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 mitogen mitogen ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 inducible inducible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B- B- PUNCT : _ _ _ _ SpaceAfter=No 10 binding binding VERB VBG VerbForm=Ger _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 14 cloned clon VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 early early ADJ JJ Degree=Pos _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 25 blood blood NOUN NN Number=Sing _ _ _ _ 26 T t PROPN NNP Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 9367 # text = The cDNA has an open reading frame of 900 amino acids capable of encoding a 97-kDa protein. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 3 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 open open ADJ JJ Degree=Pos _ _ _ _ 6 reading reading NOUN NN Number=Sing _ _ _ _ 7 frame frame NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 900 900 NUM CD NumType=Card _ _ _ _ 10 amino amino NOUN NN Number=Sing _ _ _ _ 11 acids acid NOUN NNS Number=Plur _ _ _ _ 12 capable capable ADJ JJ Degree=Pos _ _ _ _ 13 of of SCONJ IN _ _ _ _ _ 14 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 97 97 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kDa kDa NOUN NN Number=Sing _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 9368 # text = This protein is most similar to the 105-kDa precursor polypeptide of p50-NF-kappa B. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 most most ADV RBS _ _ _ _ _ 5 similar similar ADJ JJ Degree=Pos _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 105 105 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kDa kDa NOUN NN Number=Sing _ _ _ _ 11 precursor precursor NOUN NN Number=Sing _ _ _ _ 12 polypeptide polypeptide NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 9369 # text = Like the 105-kDa precursor, it contains an amino-terminal Rel-related domain of about 300 amino acids and a carboxy-terminal domain containing six full cell cycle or ankyrin repeats. 1 Like like ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 105 105 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kDa kDa NOUN NN Number=Sing _ _ _ _ 6 precursor precursor NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 9 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 amino amino NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 terminal terminal NOUN NN Number=Sing _ _ _ _ 14 Rel- rel- PUNCT : _ _ _ _ SpaceAfter=No 15 related related ADJ JJ Degree=Pos _ _ _ _ 16 domain domain NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 about about ADV RB _ _ _ _ _ 19 300 300 NUM CD NumType=Card _ _ _ _ 20 amino amino ADJ JJ Degree=Pos _ _ _ _ 21 acids acid NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 carboxy carboxy NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 terminal terminal NOUN NN Number=Sing _ _ _ _ 27 domain domain NOUN NN Number=Sing _ _ _ _ 28 containing contain VERB VBG VerbForm=Ger _ _ _ _ 29 six six NUM CD NumType=Card _ _ _ _ 30 full full ADJ JJ Degree=Pos _ _ _ _ 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 cycle cycle NOUN NN Number=Sing _ _ _ _ 33 or or CCONJ CC _ _ _ _ _ 34 ankyrin ankyrin NOUN NN Number=Sing _ _ _ _ 35 repeats repeat NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 9370 # text = In vitro-translated proteins, truncated downstream of the Rel domain and excluding the repeats, bind kappa B sites. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro ADV RB _ _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 translated translate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 truncated truncate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 downstream downstream NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 Rel Rel PROPN NNP Number=Sing _ _ _ _ 12 domain domain NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 excluding exclude VERB VBG VerbForm=Ger _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 repeats repeat NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 bind bind VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 9371 # text = We refer to the kappa B-binding, truncated protein as p50B by analogy with p50-NF-kappa B and to the full-length protein as p97. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 refer refer VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B- B- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 truncated truncated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 p50B p50b NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 analogy analogy NOUN NN Number=Sing _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 full full ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 length length NOUN NN Number=Sing _ _ _ _ 28 protein protein NOUN NN Number=Sing _ _ _ _ 29 as as ADP IN _ _ _ _ _ 30 p97. p97. NOUN NN Number=Sing _ _ _ _ # sent_id = 9372 # text = p50B is able to form heteromeric kappa B-binding complexes with RelB, as well as with p65 and p50, the two subunits of NF-kappa B. Transient-transfection experiments in embryonal carcinoma cells demonstrate a functional cooperation between p50B and RelB or p65 in transactivation of a reporter plasmid dependent on a kappa B site. 1 p50B p50b NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 able able ADJ JJ Degree=Pos _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 form form VERB VB VerbForm=Inf _ _ _ _ 6 heteromeric heteromeric ADJ JJ Degree=Pos _ _ _ _ 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 binding bind VERB VBG VerbForm=Ger _ _ _ _ 11 complexes complex NOUN NNS Number=Plur _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 RelB Relb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 as as ADV RB _ _ _ _ _ 16 well well ADV RB Degree=Pos _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 p65 p65 NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 two two NUM CD NumType=Card _ _ _ _ 25 subunits subunit NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa PROPN NNP Number=Sing _ _ _ _ 30 B. B. PROPN NNP Number=Sing _ _ _ _ 31 Transient Transient PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 transfection transfection NOUN NN Number=Sing _ _ _ _ 34 experiments experiment NOUN NNS Number=Plur _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 embryonal embryonal ADJ JJ Degree=Pos _ _ _ _ 37 carcinoma carcinoma NOUN NN Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ _ 39 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 40 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 41 functional functional ADJ JJ Degree=Pos _ _ _ _ 42 cooperation cooperation NOUN NN Number=Sing _ _ _ _ 43 between between ADP IN _ _ _ _ _ 44 p50B p50b NOUN NN Number=Sing _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 RelB Relb NOUN NN Number=Sing _ _ _ _ 47 or or CCONJ CC _ _ _ _ _ 48 p65 p65 NOUN NN Number=Sing _ _ _ _ 49 in in ADP IN _ _ _ _ _ 50 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 51 of of ADP IN _ _ _ _ _ 52 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 53 reporter reporter NOUN NN Number=Sing _ _ _ _ 54 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 55 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 56 on on ADP IN _ _ _ _ _ 57 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 58 kappa kappa NOUN NN Number=Sing _ _ _ _ 59 B b NOUN NN Number=Sing _ _ _ _ 60 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ _ # sent_id = 9373 # text = The data imply the existence of a complex family of NF-kappa B-like transcription factors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 imply imply ADV RB _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 existence existence NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 complex complex ADJ JJ Degree=Pos _ _ _ _ 9 family family NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ 14 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 like like ADJ JJ Degree=Pos _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9374 # text = Document 0030011814 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011814 0030011814 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9375 # text = MEK1 and the extracellular signal-regulated kinases are required for the stimulation of IL-2 gene transcription in T cells. 1 MEK1 Mek1 PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 5 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 kinases kinase NOUN NNS Number=Plur _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9376 # text = TCR engagement stimulates the activation of the protein kinase Raf-1. 1 TCR Tcr ADJ JJR Degree=Cmp _ _ _ _ 2 engagement engagement NOUN NN Number=Sing _ _ _ _ 3 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 kinase kinase NOUN NN Number=Sing _ _ _ _ 10 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 9377 # text = Active Raf-1 phosphorylates and activates the mitogen-activated protein (MAP) kinase/extracellular signal-regulated kinase kinase 1 (MEK1), which in turn phosphorylates and activates the MAP kinases/extracellular signal regulated kinases, ERK1 and ERK2. 1 Active active ADJ JJ Degree=Pos _ _ _ _ 2 Raf Raf NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 phosphorylates phosphorylate NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 MAP map PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 19 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 kinase kinase NOUN NN Number=Sing _ _ _ _ 23 kinase kinase NOUN NN Number=Sing _ _ _ _ 24 1 1 NUM CD NumType=Card _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 MEK1 Mek1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 which which PRON WDT PronType=Rel _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 turn turn NOUN NN Number=Sing _ _ _ _ 32 phosphorylates phosphorylate NOUN NNS Number=Plur _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 MAP map NOUN NN Number=Sing _ _ _ _ 37 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 / / PUNCT , _ _ _ _ SpaceAfter=No 39 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 40 signal signal NOUN NN Number=Sing _ _ _ _ 41 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 ERK1 Erk1 PROPN NNP Number=Sing _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 ERK2 Erk2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 9378 # text = Raf-1 activity promotes IL-2 production in activated T lymphocytes. 1 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 activity activity NOUN NN Number=Sing _ _ _ _ 5 promotes promote VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 production production NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 9379 # text = Therefore, we sought to determine whether MEK1 and ERK activities also stimulate IL-2 gene transcription. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 sought seek VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 determine determine VERB VB VerbForm=Inf _ _ _ _ 7 whether whether SCONJ IN _ _ _ _ _ 8 MEK1 Mek1 PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 ERK Erk PROPN NNP Number=Sing _ _ _ _ 11 activities activity NOUN NNS Number=Plur _ _ _ _ 12 also also ADV RB _ _ _ _ _ 13 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 14 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 9380 # text = Expression of constitutively active Raf-1 or MEK1 in Jurkat T cells enhanced the stimulation of IL-2 promoter-driven transcription stimulated by a calcium ionophore and PMA, and together with a calcium ionophore the expression of each protein was sufficient to stimulate NF-AT activity. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 constitutively constitutively ADV RB _ _ _ _ _ 4 active active ADJ JJ Degree=Pos _ _ _ _ 5 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 MEK1 MEK1 PROPN NNP Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 12 T T PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 enhanced enhance VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 calcium calcium NOUN NN Number=Sing _ _ _ _ 29 ionophore ionophore NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 together together ADV RB _ _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 calcium calcium NOUN NN Number=Sing _ _ _ _ 38 ionophore ionophore SCONJ IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 expression expression NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 each each DET DT _ _ _ _ _ 43 protein protein NOUN NN Number=Sing _ _ _ _ 44 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 45 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 46 to to PART TO _ _ _ _ _ 47 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 48 NF Nf ADV RB _ _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 AT at ADJ JJ Degree=Pos _ _ _ _ 51 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 9381 # text = Expression of MEK1-interfering mutants inhibited the stimulation of IL-2 promoter-driven transcription and blocked the ability of constitutively active Ras and Raf-1 to costimulate NF-AT activity with a calcium ionophore. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 MEK1 MEK1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 interfering interfere VERB VBG VerbForm=Ger _ _ _ _ 6 mutants mutant NOUN NNS Number=Plur _ _ _ _ 7 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 driven driven VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 ability ability NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 constitutively constitutively ADV RB _ _ _ _ _ 24 active active ADJ JJ Degree=Pos _ _ _ _ 25 Ras Ras PROPN NNPS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 to to PART TO _ _ _ _ _ 31 costimulate costimulate VERB VB VerbForm=Inf _ _ _ _ 32 NF Nf ADV RB _ _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 AT at ADJ JJ Degree=Pos _ _ _ _ 35 activity activity NOUN NN Number=Sing _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 calcium calcium NOUN NN Number=Sing _ _ _ _ 39 ionophore ionophore NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 9382 # text = Expression of the MAP kinase-specific phosphatase, MKP-1, which blocks ERK activation, inhibited IL-2 promoter and NF-AT-driven transcription stimulated by a calcium ionophore and PMA, and in addition, MKP-1 neutralized the transcriptional enhancement caused by active Raf-1 and MEK1 expression. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 MAP map PROPN NNP Number=Sing _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 phosphatase phosphatase NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 MKP MKP NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 blocks block VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 ERK ERK PROPN NNP Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 AT AT NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ _ 31 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 calcium calcium NOUN NN Number=Sing _ _ _ _ 35 ionophore ionophore NOUN NN Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 MKP MKP NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 1 1 NUM CD NumType=Card _ _ _ _ 46 neutralized neutralize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 49 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 50 caused cause VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 51 by by ADP IN _ _ _ _ _ 52 active active ADJ JJ Degree=Pos _ _ _ _ 53 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 1 1 NUM CD NumType=Card _ _ _ _ 56 and and CCONJ CC _ _ _ _ _ 57 MEK1 MEK1 NUM CD NumType=Card _ _ _ _ 58 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 9383 # text = We conclude that the MAP kinase signal transduction pathway consisting of Raf-1, MEK1, and ERK1 and ERK2 functions in the stimulation IL-2 gene transcription in activated T lymphocytes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 MAP map NOUN NN Number=Sing _ _ _ _ 6 kinase kinase NOUN NN Number=Sing _ _ _ _ 7 signal signal NOUN NN Number=Sing _ _ _ _ 8 transduction transduction NOUN NN Number=Sing _ _ _ _ 9 pathway pathway NOUN NN Number=Sing _ _ _ _ 10 consisting consisting VERB VBG VerbForm=Ger _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 MEK1 Mek1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 ERK1 ERK1 PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 ERK2 ERK2 NUM CD NumType=Card _ _ _ _ 22 functions function NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 26 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ _ 29 gene gene NOUN NN Number=Sing _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 T t PROPN NNP Number=Sing _ _ _ _ 34 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9384 # text = Document 0030011815 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011815 0030011815 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9385 # text = Function and activation of NF-kappa B in the immune system. 1 Function function NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 immune immune ADJ JJ Degree=Pos _ _ _ _ 12 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9386 # text = NF-kappa B is a ubiquitous transcription factor. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 9387 # text = Nevertheless, its properties seem to be most extensively exploited in cells of the immune system. 1 Nevertheless nevertheless ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 4 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 properties property NOUN NNS Number=Plur _ _ _ _ 6 seem seem VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 most most ADV RBS _ _ _ _ _ 10 extensively extensively ADV RB _ _ _ _ _ 11 exploited exploit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 immune immune ADJ JJ Degree=Pos _ _ _ _ 17 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 9388 # text = Among these properties are NF-kappa B's rapid posttranslational activation in response to many pathogenic signals, its direct participation in cytoplasmic/nuclear signaling, and its potency to activate transcription of a great variety of genes encoding immunologically relevant proteins. 1 Among among ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 properties property NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 's 's PART POS _ _ _ _ _ 10 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 11 posttranslational posttranslational ADJ JJ Degree=Pos _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 response response NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 many many ADJ JJ Degree=Pos _ _ _ _ 17 pathogenic pathogenic ADJ JJ Degree=Pos _ _ _ _ 18 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 direct direct ADJ JJ Degree=Pos _ _ _ _ 22 participation participation NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 / / PUNCT , _ _ _ _ SpaceAfter=No 26 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 27 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 31 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 potency potency NOUN NN Number=Sing _ _ _ _ 33 to to PART TO _ _ _ _ _ 34 activate activate VERB VB VerbForm=Inf _ _ _ _ 35 transcription transcription NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 great great ADJ JJ Degree=Pos _ _ _ _ 39 variety variety NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 genes gene NOUN NNS Number=Plur _ _ _ _ 42 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 43 immunologically immunologically ADV RB _ _ _ _ _ 44 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 45 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 9389 # text = In vertebrates, five distinct DNA binding subunits are currently known which might extensively heterodimerize, thereby forming complexes with distinct transcriptional activity, DNA sequence specificity, and cell type- and cell stage-specific distribution. 1 In in ADP IN _ _ _ _ _ 2 vertebrates vertebrate NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 five five NUM CD NumType=Card _ _ _ _ 5 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ _ 7 binding binding VERB VBG VerbForm=Ger _ _ _ _ 8 subunits subunit NOUN NNS Number=Plur _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 currently currently ADV RB _ _ _ _ _ 11 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 which which PRON WDT PronType=Int _ _ _ _ 13 might might AUX MD VerbForm=Fin _ _ _ _ 14 extensively extensively ADV RB _ _ _ _ _ 15 heterodimerize heterodimerize VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 thereby thereby ADV RB _ _ _ _ _ 18 forming form VERB VBG VerbForm=Ger _ _ _ _ 19 complexes complex NOUN NNS Number=Plur _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 22 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 DNA dna NOUN NN Number=Sing _ _ _ _ 26 sequence sequence NOUN NN Number=Sing _ _ _ _ 27 specificity specificity NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 stage stage NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 specific specific ADJ JJ Degree=Pos _ _ _ _ 38 distribution distribution NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 9390 # text = The activity of DNA binding NF-kappa B dimers is tightly controlled by accessory proteins called I kappa B subunits of which there are also five different species currently known in vertebrates. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activity activity NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ _ 5 binding bind VERB VBG VerbForm=Ger _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 dimers dimer NOUN NNS Number=Plur _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 tightly tightly ADV RB _ _ _ _ _ 13 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 accessory accessory ADJ JJ Degree=Pos _ _ _ _ 16 proteins protein NOUN NNS Number=Plur _ _ _ _ 17 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 19 kappa kappa X FW Foreign=Yes _ _ _ _ 20 B b ADJ JJ Degree=Pos _ _ _ _ 21 subunits subunit NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 there there PRON EX _ _ _ _ _ 25 are be VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 also also ADV RB _ _ _ _ _ 27 five five NUM CD NumType=Card _ _ _ _ 28 different different ADJ JJ Degree=Pos _ _ _ _ 29 species species NOUN NNS Number=Plur _ _ _ _ 30 currently currently ADV RB _ _ _ _ _ 31 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 vertebrates vertebrate NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 9391 # text = I kappa B proteins inhibit DNA binding and prevent nuclear uptake of NF-kappa B complexes. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa X FW Foreign=Yes _ _ _ _ 3 B b ADJ JJ Degree=Pos _ _ _ _ 4 proteins protein NOUN NNS Number=Plur _ _ _ _ 5 inhibit inhibit NOUN NN Number=Sing _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ _ 7 binding binding VERB VBG VerbForm=Ger _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 prevent prevent VERB VB VerbForm=Inf _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 uptake uptake NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 9392 # text = An exception is the Bcl-3 protein which in addition can function as a transcription activating subunit in th nucleus. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 exception exception NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 Bcl Bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 3 3 NUM CD NumType=Card _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 which which PRON WDT PronType=Rel _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 addition addition NOUN NN Number=Sing _ _ _ _ 12 can can AUX MD VerbForm=Fin _ _ _ _ 13 function function VERB VB VerbForm=Inf _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 activating activat VERB VBG VerbForm=Ger _ _ _ _ 18 subunit subunit NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 th th ADJ JJ Degree=Pos _ _ _ _ 21 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 9393 # text = Other I kappa B proteins are rather involved in terminating NF-kappa B's activity in the nucleus. 1 Other other ADJ JJ Degree=Pos _ _ _ _ 2 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 3 kappa kappa X FW Foreign=Yes _ _ _ _ 4 B b ADJ JJ Degree=Pos _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 rather rather ADV RB _ _ _ _ _ 8 involved involved ADJ JJ Degree=Pos _ _ _ _ 9 in in SCONJ IN _ _ _ _ _ 10 terminating terminat VERB VBG VerbForm=Ger _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ 14 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 's 's PART POS _ _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 9394 # text = The intracellular events that lead to the inactivation of I kappa B, i.e. the activation of NF-kappa B, are complex. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 3 events event NOUN NNS Number=Plur _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 lead lead VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 inactivation inactivation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 kappa kappa PROPN NNP Number=Sing _ _ _ _ 12 B benefit PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 i.e. i.e. X FW _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa PROPN NNP Number=Sing _ _ _ _ 21 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 complex complex ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 9395 # text = They involve phosphorylation and proteolytic reactions and seem to be controlled by the cells' redox status. 1 They they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 2 involve involve VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 proteolytic proteolytic ADJ JJ Degree=Pos _ _ _ _ 6 reactions reaction NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 seem seem VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 ' 's PART POS _ _ _ _ _ 16 redox redox NOUN NN Number=Sing _ _ _ _ 17 status status NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 9396 # text = Interference with the activation or activity of NF-kappa B may be beneficial in suppressing toxic/septic shock, graft-vs-host reactions, acute inflammatory reactions, acute phase response, and radiation damage. 1 Interference interference NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 or or CCONJ CC _ _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B b PROPN NNP Number=Sing _ _ _ _ 12 may may AUX MD VerbForm=Fin _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 beneficial beneficial ADJ JJ Degree=Pos _ _ _ _ 15 in in SCONJ IN _ _ _ _ _ 16 suppressing suppresse VERB VBG VerbForm=Ger _ _ _ _ 17 toxic toxic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 / / PUNCT , _ _ _ _ SpaceAfter=No 19 septic septic ADJ JJ Degree=Pos _ _ _ _ 20 shock shock NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 graft graft NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 vs versus NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 host host NOUN NN Number=Sing _ _ _ _ 27 reactions reaction NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 acute acute ADJ JJ Degree=Pos _ _ _ _ 30 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 31 reactions reaction NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 acute acute ADJ JJ Degree=Pos _ _ _ _ 34 phase phase NOUN NN Number=Sing _ _ _ _ 35 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 radiation radiation NOUN NN Number=Sing _ _ _ _ 39 damage damage NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 9397 # text = The inhibition of NF-kappa B activation by antioxidants and specific protease inhibitors may provide a pharmacological basis for interfering with these acute processes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 protease protease NOUN NN Number=Sing _ _ _ _ 14 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 15 may may AUX MD VerbForm=Fin _ _ _ _ 16 provide provide VERB VB VerbForm=Inf _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 pharmacological pharmacological ADJ JJ Degree=Pos _ _ _ _ 19 basis basis NOUN NN Number=Sing _ _ _ _ 20 for for SCONJ IN _ _ _ _ _ 21 interfering interfere VERB VBG VerbForm=Ger _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 24 acute acute ADJ JJ Degree=Pos _ _ _ _ 25 processes process NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9398 # text = Document 0030011816 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011816 0030011816 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9399 # text = A novel genetic system to isolate a dominant negative effector on DNA-binding activity of Oct-2. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 novel novel ADJ JJ Degree=Pos _ _ _ _ 3 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 4 system system NOUN NN Number=Sing _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 isolate isolate VERB VB VerbForm=Inf _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 9 negative negative ADJ JJ Degree=Pos _ _ _ _ 10 effector effector NOUN NN Number=Sing _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9400 # text = Recent studies have revealed that interactions between transcription factors play an important role in regulation of gene expression in eukaryotic cells. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 interactions interaction NOUN NNS Number=Plur _ _ _ _ 7 between between ADP IN _ _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factors factor NOUN NNS Number=Plur _ _ _ _ 10 play play VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 important important ADJ JJ Degree=Pos _ _ _ _ 13 role role NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 regulation regulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 eukaryotic eukaryotic ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 9401 # text = To isolate cDNA clones that dominantly inhibit the DNA-binding activity of Oct-2, chosen as a representative factor, we have developed a novel screening system. 1 To to PART TO _ _ _ _ _ 2 isolate isolate VERB VB VerbForm=Inf _ _ _ _ 3 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 4 clones clone NOUN NNS Number=Plur _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 dominantly dominantly ADV RB _ _ _ _ _ 7 inhibit inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 chosen chosen VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 as as ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 representative representative NOUN NN Number=Sing _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 25 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 developed develop VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 novel novel NOUN NN Number=Sing _ _ _ _ 29 screening screen VERB VBG VerbForm=Ger _ _ _ _ 30 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 9402 # text = This employs an Escherichia coli tester strain carrying a modified lac operon as a reporter gene, with the lac operator sequence replaced by an octamer sequence. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 employs employ VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 Escherichia Escherichia PROPN NNP Number=Sing _ _ _ _ 5 coli coli NOUN NN Number=Sing _ _ _ _ 6 tester tester NOUN NN Number=Sing _ _ _ _ 7 strain strain NOUN NN Number=Sing _ _ _ _ 8 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 modified modify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 lac lac NOUN NN Number=Sing _ _ _ _ 12 operon operon NOUN NN Number=Sing _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 reporter reporter NOUN NN Number=Sing _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 lac lac ADJ JJ Degree=Pos _ _ _ _ 21 operator operator NOUN NN Number=Sing _ _ _ _ 22 sequence sequence NOUN NN Number=Sing _ _ _ _ 23 replaced replace VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 octamer octamer ADJ JJ Degree=Pos _ _ _ _ 27 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 9403 # text = Oct-2 expressed in this tester strain represses the expression of the reporter gene and changes the phenotype of the cell from Lac+to Lac-. 1 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 tester tester NOUN NN Number=Sing _ _ _ _ 8 strain strain NOUN NN Number=Sing _ _ _ _ 9 represses repress VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 reporter reporter NOUN NN Number=Sing _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 changes change VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 Lac Lac PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 + + SYM SYM _ _ _ _ SpaceAfter=No 26 to to ADP IN _ _ _ _ _ 27 Lac Lac PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 -. -. PUNCT . _ _ _ _ _ # sent_id = 9404 # text = Introduction of a cDNA expression library prepared from a human T-cell line into the Oct-2-harboring tester strain allowed selection of three Lac+clones out of 1 x 10(5) transformants. 1 Introduction introduction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 cDNA cDNA NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 library library NOUN NN Number=Sing _ _ _ _ 7 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 line line NOUN NN Number=Sing _ _ _ _ 14 into into ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 harboring harboring NOUN NN Number=Sing _ _ _ _ 21 tester tester NOUN NN Number=Sing _ _ _ _ 22 strain strain NOUN NN Number=Sing _ _ _ _ 23 allowed allow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 selection selection NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 three three NUM CD NumType=Card _ _ _ _ 27 Lac+ Lac+ NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 clones clone NOUN NNS Number=Plur _ _ _ _ 29 out out ADP IN _ _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 1 1 NUM CD NumType=Card _ _ _ _ 32 x x SYM SYM _ _ _ _ _ 33 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 transformants transformant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 9405 # text = One of them, hT86, encoding a putative zinc finger protein was found to derepress beta-galactosidase activity in the Oct-2-harboring tester strain at the transcriptional level. 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 hT86 hT86 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 putative putative ADJ JJ Degree=Pos _ _ _ _ 10 zinc zinc NOUN NN Number=Sing _ _ _ _ 11 finger finger NOUN NN Number=Sing _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 derepress derepress VERB VB VerbForm=Inf _ _ _ _ 17 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 galactosidase galactosidase NOUN NN Number=Sing _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 harboring harbor NOUN NN Number=Sing _ _ _ _ 28 tester tester NOUN NN Number=Sing _ _ _ _ 29 strain strain NOUN NN Number=Sing _ _ _ _ 30 at at ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 33 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 9406 # text = In gel mobility shift assays, hT86 attenuated the intensity of the retarded band composed of the octamer probe and Oct-2, suggesting a dominant negative effect on the DNA-binding activity of Oct-2. 1 In in ADP IN _ _ _ _ _ 2 gel gel NOUN NN Number=Sing _ _ _ _ 3 mobility mobility NOUN NN Number=Sing _ _ _ _ 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assays assays NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 hT86 hT86 PROPN NNP Number=Sing _ _ _ _ 8 attenuated attenuate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 intensity intensity NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 retarded retarded ADJ JJ Degree=Pos _ _ _ _ 14 band band NOUN NN Number=Sing _ _ _ _ 15 composed compose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 octamer octamer ADJ JJ Degree=Pos _ _ _ _ 19 probe probe NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 28 negative negative ADJ JJ Degree=Pos _ _ _ _ 29 effect effect NOUN NN Number=Sing _ _ _ _ 30 on on ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 binding bind VERB VBG VerbForm=Ger _ _ _ _ 35 activity activity NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 9407 # text = The strategy described here provides a new approach for studying protein-protein interactions that govern the complex regulation of gene expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 strategy strategy NOUN NN Number=Sing _ _ _ _ 3 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 here here ADV RB PronType=Dem _ _ _ _ 5 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 new new ADJ JJ Degree=Pos _ _ _ _ 8 approach approach NOUN NN Number=Sing _ _ _ _ 9 for for SCONJ IN _ _ _ _ _ 10 studying study VERB VBG VerbForm=Ger _ _ _ _ 11 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 interactions interaction NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 govern govern VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 complex complex ADJ JJ Degree=Pos _ _ _ _ 18 regulation regulation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 gene gene ADJ JJ Degree=Pos _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9408 # text = Document 0030011827 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011827 0030011827 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9409 # text = Tpl-2 induces IL-2 expression in T-cell lines by triggering multiple signaling pathways that activate NFAT and NF-kappaB. 1 Tpl Tpl VERB VB Mood=Imp|VerbForm=Fin _ _ _ SpaceAfter=No 2 -2 -2 NUM CD NumType=Card _ _ _ _ 3 induces induce NOUN NNS Number=Plur _ _ _ _ 4 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 lines line NOUN NNS Number=Plur _ _ _ _ 12 by by SCONJ IN _ _ _ _ _ 13 triggering trigger VERB VBG VerbForm=Ger _ _ _ _ 14 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 15 signaling signaling NOUN NN Number=Sing _ _ _ _ 16 pathways pathway NOUN NNS Number=Plur _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 activate activate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9410 # text = The Tpl-2 kinase activates the nuclear factor of activated T cells (NFAT) and induces IL-2 expression in T-cell lines. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Tpl Tpl NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ _ 6 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 induces induce NOUN NNS Number=Plur _ _ _ _ 19 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 9411 # text = Here we show that the activation of the IL-2 promoter by Tpl-2 is inhibited by mutant signaling molecules that inhibit the mitogen-activated protein kinase (MAPK) or the calcineurin/NFAT pathways and is promoted by combinations of signaling molecules that activate these pathways. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 Tpl Tpl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 21 signaling signaling NOUN NN Number=Sing _ _ _ _ 22 molecules molecule NOUN NNS Number=Plur _ _ _ _ 23 that that PRON WDT PronType=Rel _ _ _ _ 24 inhibit inhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ _ 30 kinase kinase NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 MAPK MAPK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 or or CCONJ CC _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 / / PUNCT , _ _ _ _ SpaceAfter=No 38 NFAT Nfat NOUN NN Number=Sing _ _ _ _ 39 pathways pathway NOUN NNS Number=Plur _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 42 promoted promote VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 43 by by ADP IN _ _ _ _ _ 44 combinations combination NOUN NNS Number=Plur _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 signaling signal NOUN NN Number=Sing _ _ _ _ 47 molecules molecule NOUN NNS Number=Plur _ _ _ _ 48 that that PRON WDT PronType=Rel _ _ _ _ 49 activate activate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 50 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 51 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 9412 # text = We, therefore, conclude that signals generated by the convergence of the MAPK and the calcineurin/NFAT pathway are necessary and sufficient for the activation of the IL-2 promoter by Tpl-2. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 therefore therefore ADV RB _ _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 conclude conclude VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 6 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 7 signals signal NOUN NNS Number=Plur _ _ _ _ 8 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 convergence convergence NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 MAPK MAPK PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 / / PUNCT , _ _ _ _ SpaceAfter=No 19 NFAT Nfat NOUN NN Number=Sing _ _ _ _ 20 pathway pathway NOUN NN Number=Sing _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 2 2 NUM CD NumType=Card _ _ _ _ 33 promoter promoter NOUN NN Number=Sing _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 Tpl Tpl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 9413 # text = The activation of both the IL-2 promoter and an NFAT-driven minimal promoter were shown to depend on signals transduced by Raf1. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 both both CCONJ CC _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 depend depend VERB VB VerbForm=Inf _ _ _ _ 21 on on ADP IN _ _ _ _ _ 22 signals signal NOUN NNS Number=Plur _ _ _ _ 23 transduced transduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 Raf1 Raf1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 9414 # text = However, it was only the IL-2 promoter whose activation by Tpl-2 was fully blocked by the dominant negative mutant MEK1S218/222A and the MEK1/MEK2 inhibitor PD098059. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 only only ADV RB _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 Tpl Tpl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 fully fully ADV RB _ _ _ _ _ 19 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 23 negative negative ADJ JJ Degree=Pos _ _ _ _ 24 mutant mutant NOUN NN Number=Sing _ _ _ _ 25 MEK1S218/222A MEK1S218/222a NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 MEK1 Mek1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 / / PUNCT , _ _ _ _ SpaceAfter=No 30 MEK2 MEK2 NUM CD NumType=Card _ _ _ _ 31 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 32 PD098059 PD098059 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 9415 # text = Since the activation of NFAT is MAPK-dependent these findings suggested that the activation of MAPK by Tpl-2 is either independent or only partially dependent on MEK1 and MEK2. 1 Since since SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 MAPK MAPK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 findings finding NOUN NNS Number=Plur _ _ _ _ 12 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 MAPK MAPK PROPN NNP Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 Tpl Tpl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 either either CCONJ CC _ _ _ _ _ 24 independent independent ADJ JJ Degree=Pos _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 only only ADV RB _ _ _ _ _ 27 partially partially ADV RB _ _ _ _ _ 28 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 29 on on ADP IN _ _ _ _ _ 30 MEK1 Mek1 NUM CD NumType=Card _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 MEK2 Mek2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 9416 # text = In addition, they suggested that the activation of the IL-2 promoter is under the control of not only NFAT but also a second factor whose activation is MEK-dependent. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 5 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 under under ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 control control NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 not not ADV RB _ _ _ _ _ 21 only only ADV RB _ _ _ _ _ 22 NFAT Nfat ADV RB _ _ _ _ _ 23 but but CCONJ CC _ _ _ _ _ 24 also also ADV RB _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ _ 28 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 MEK Mek PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 9417 # text = Experiments in COS-1 and EL-4 cells confirmed both hypotheses and revealed that the second factor activated by Tpl-2 is NF-kappaB. 1 Experiments Experiment NOUN NNS Number=Plur _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 COS COS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 EL EL NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 4 4 NUM CD NumType=Card _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 confirmed confirm VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 both both CCONJ CC _ _ _ _ _ 13 hypotheses hypothese NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 Tpl Tpl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 9418 # text = While the activation of the IL-2 promoter and an NFAT-driven minimal promoter by Tpl-2 was fully blocked by the dominant negative mutant NFAT delta418, it was only partially blocked by the calcineurin inhibitor cyclosporin 1 While while SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 Tpl Tpl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 fully fully ADV RB _ _ _ _ _ 23 blocked blocked VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 27 negative negative ADJ JJ Degree=Pos _ _ _ _ 28 mutant mutant NOUN NN Number=Sing _ _ _ _ 29 NFAT NFAT NOUN NN Number=Sing _ _ _ _ 30 delta418 delta418 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 33 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 34 only only ADV RB _ _ _ _ _ 35 partially partially ADV RB _ _ _ _ _ 36 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 by by ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 40 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 41 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ # sent_id = 9419 # text = A suggesting that the Tpl-2-mediated NFAT activation is under the control of a combination of calcineurin-dependent and independent pathways. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 suggesting suggest NOUN NN Number=Sing _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 Tpl Tpl NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 NFAT Nfat NOUN NN Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 under under ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 control control NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 combination combination NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 calcineurin- calcineurin- SYM NFP _ _ _ _ SpaceAfter=No 21 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 independent independent ADJ JJ Degree=Pos _ _ _ _ 24 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 9420 # text = Both pathways were fully blocked by Bcl-2 or Bcl-X(L). 1 Both both DET DT _ _ _ _ _ 2 pathways pathway NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 fully fully ADV RB _ _ _ _ _ 5 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 -X -X PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 L L PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9421 # text = Document 0030011829 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011829 0030011829 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9422 # text = Regulation of cytokine and cytokine receptor expression by glucocorticoids. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9423 # text = Glucocorticoids (GCS) profoundly inhibit several aspects of T cell immunity largely through inhibition of cytokine expression at the transcriptional and posttranscriptional levels. 1 Glucocorticoids Glucocorticoid PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 GCS GCS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 profoundly profoundly ADV RB _ _ _ _ _ 6 inhibit inhibit VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 7 several several ADJ JJ Degree=Pos _ _ _ _ 8 aspects aspect NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 T t NUM CD NumType=Card _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 immunity immunity NOUN NN Number=Sing _ _ _ _ 13 largely largely ADV RB _ _ _ _ _ 14 through through ADP IN _ _ _ _ _ 15 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 at at ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 posttranscriptional posttranscriptional ADJ JJ Degree=Pos _ _ _ _ 24 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 9424 # text = GCS were also reported to act indirectly by inducing transforming growth factor-beta expression, which in turn blocks T cell immunity. 1 GCS Gc NOUN NNS Number=Plur _ _ _ _ 2 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 act act VERB VB VerbForm=Inf _ _ _ _ 7 indirectly indirectly ADV RB _ _ _ _ _ 8 by by SCONJ IN _ _ _ _ _ 9 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 10 transforming transform VERB VBG VerbForm=Ger _ _ _ _ 11 growth growth NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 beta beta NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 turn turn NOUN NN Number=Sing _ _ _ _ 20 blocks block NOUN NNS Number=Plur _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 immunity immunity NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 9425 # text = In exerting their antiproliferative effects, GCS diffuse into target cells where they bind their cytoplasmic receptor, which in turn translocates to the nucleus where it inhibits transcription of cytokine genes through direct binding to the glucocorticoid response elements (GRE), which are located in the promoter region of cytokine genes or, alternatively, through antagonism of the action of transcription factors required for optimal transcriptional activation. 1 In in SCONJ IN _ _ _ _ _ 2 exerting exert VERB VBG VerbForm=Ger _ _ _ _ 3 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 4 antiproliferative antiproliferative ADJ JJ Degree=Pos _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 GCS Gc NOUN NNS Number=Plur _ _ _ _ 8 diffuse diffuse VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 into into ADP IN _ _ _ _ _ 10 target target NOUN NN Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 where where ADV WRB PronType=Int _ _ _ _ 13 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 14 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 turn turn NOUN NN Number=Sing _ _ _ _ 22 translocates translocate NOUN NNS Number=Plur _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 26 where where ADV WRB PronType=Rel _ _ _ _ 27 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 28 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 32 genes gene NOUN NNS Number=Plur _ _ _ _ 33 through through ADP IN _ _ _ _ _ 34 direct direct ADJ JJ Degree=Pos _ _ _ _ 35 binding binding VERB VBG VerbForm=Ger _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 39 response response NOUN NN Number=Sing _ _ _ _ 40 elements element NOUN NNS Number=Plur _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 GRE GRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 which which PRON WDT PronType=Rel _ _ _ _ 46 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 47 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 promoter promoter NOUN NN Number=Sing _ _ _ _ 51 region region NOUN NN Number=Sing _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 54 genes gene NOUN NNS Number=Plur _ _ _ _ 55 or or CCONJ CC _ _ _ _ SpaceAfter=No 56 , , PUNCT , _ _ _ _ _ 57 alternatively alternatively ADV RB _ _ _ _ SpaceAfter=No 58 , , PUNCT , _ _ _ _ _ 59 through through ADP IN _ _ _ _ _ 60 antagonism antagonism NOUN NN Number=Sing _ _ _ _ 61 of of ADP IN _ _ _ _ _ 62 the the DET DT Definite=Def|PronType=Art _ _ _ _ 63 action action NOUN NN Number=Sing _ _ _ _ 64 of of ADP IN _ _ _ _ _ 65 transcription transcription NOUN NN Number=Sing _ _ _ _ 66 factors factor NOUN NNS Number=Plur _ _ _ _ 67 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 68 for for ADP IN _ _ _ _ _ 69 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 70 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 71 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 72 . . PUNCT . _ _ _ _ _ # sent_id = 9426 # text = In contrast to their inhibitory effects on cytokine expression, GCS up-regulate cytokine receptor expression that correlates with enhanced cytokine effects on target cells. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 5 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 6 effects effect NOUN NNS Number=Plur _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 GCS GCS VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 12 up up ADV RB _ _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 regulate regulate ADJ JJ Degree=Pos _ _ _ _ 15 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 23 effects effect NOUN NNS Number=Plur _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 target target NOUN NN Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 9427 # text = In this review, we summarize the current state of knowledge of the mechanism of action of GCS, including the phenomenon of steroid-induced rebound, which ensues upon GCS withdrawal. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 review review NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 summarize summarize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 current current ADJ JJ Degree=Pos _ _ _ _ 9 state state NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 knowledge knowledge NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 action action NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 GCS GCS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 including include VERB VBG VerbForm=Ger _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 phenomenon phenomenon NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 steroid steroid VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 rebound rebound NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 which which PRON WDT PronType=Rel _ _ _ _ 30 ensues ensue VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 upon upon ADP IN _ _ _ _ _ 32 GCS GCS PROPN NNP Number=Sing _ _ _ _ 33 withdrawal withdrawal PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9428 # text = Document 0030011833 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011833 0030011833 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9429 # text = Selenium-mediated inhibition of transcription factor NF-kappa B and HIV-1 LTR promoter activity. 1 Selenium- Selenium- SYM NFP _ _ _ _ SpaceAfter=No 2 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B b PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 HIV Hiv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 LTR Ltr NOUN NN Number=Sing _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9430 # text = The eukaryotic transcription factor NF-kappa B is involved in the inducible expression of various inflammatory genes as well as in HIV-1 replication. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 eukaryotic eukaryotic ADJ JJ Degree=Pos _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 involved involved ADJ JJ Degree=Pos _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 various various ADJ JJ Degree=Pos _ _ _ _ 17 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 18 genes gene NOUN NNS Number=Plur _ _ _ _ 19 as as ADV RB _ _ _ _ _ 20 well well ADV RB Degree=Pos _ _ _ _ 21 as as ADP IN _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 9431 # text = Activation of NF-kappa B is induced by prooxidants and several stimuli eliciting oxidative stress, such as cytokines, lipopolysaccharide, UV irradiation and other mediators. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B b PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 prooxidants prooxidant NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 several several ADJ JJ Degree=Pos _ _ _ _ 13 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 14 eliciting elicit VERB VBG VerbForm=Ger _ _ _ _ 15 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 16 stress stress NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 such such ADJ JJ Degree=Pos _ _ _ _ 19 as as ADP IN _ _ _ _ _ 20 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 UV UV PROPN NNP Number=Sing _ _ _ _ 25 irradiation irradiation NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 other other ADJ JJ Degree=Pos _ _ _ _ 28 mediators mediator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 9432 # text = Various antioxidants inhibit NF-kappa B activation in response to these stimuli. 1 Various various ADJ JJ Degree=Pos _ _ _ _ 2 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ _ 3 inhibit inhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 response response NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 13 stimuli stimuli NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 9433 # text = In this study, we have investigated the effects of selenium, an integral component of glutathione peroxidase (GPX), on NF-kappa B activation. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 effects effect NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 selenium selenium NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 integral integral ADJ JJ Degree=Pos _ _ _ _ 15 component component NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 glutathione glutathione NOUN NN Number=Sing _ _ _ _ 18 peroxidase peroxidase NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 GPX GPX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 on on ADP IN _ _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa NOUN NN Number=Sing _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 9434 # text = In selenium-deprived Jurkat and ESb-L 1 In in ADP IN _ _ _ _ _ 2 selenium selenium NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 deprived deprive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 ESb ESb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 L L PROPN NNP Number=Sing _ _ _ _ # sent_id = 9435 # text = T lymphocytes, supplementation of selenium led to a substantial increase of GPX activity. 1 T t NOUN NN Number=Sing _ _ _ _ 2 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 supplementation supplementation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 selenium selenium NOUN NN Number=Sing _ _ _ _ 7 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 substantial substantial ADJ JJ Degree=Pos _ _ _ _ 11 increase increase NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 GPX GPX ADJ JJ Degree=Pos _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 9436 # text = Analysis of DNA binding revealed that NF-kappa B activation in response to TNF was significantly inhibited under these conditions. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 DNA dna NOUN NN Number=Sing _ _ _ _ 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 response response NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 TNF TNF PROPN NNP Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 significantly significantly ADV RB _ _ _ _ _ 18 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 under under ADP IN _ _ _ _ _ 20 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 21 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 9437 # text = Likewise, reporter gene assays using luciferase constructs driven by the HIV-1 long terminal repeat showed a dose-dependent inhibition of NF-kappa B controlled gene expression by selenium. 1 Likewise likewise ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 reporter reporter NOUN NN Number=Sing _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 using use VERB VBG VerbForm=Ger _ _ _ _ 7 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 8 constructs construct NOUN NNS Number=Plur _ _ _ _ 9 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 long long ADJ JJ Degree=Pos _ _ _ _ 16 terminal terminal NOUN NN Number=Sing _ _ _ _ 17 repeat repeat NOUN NN Number=Sing _ _ _ _ 18 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 23 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa PROPN NNP Number=Sing _ _ _ _ 28 B b PROPN NNP Number=Sing _ _ _ _ 29 controlled control VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 gene gene ADJ JJ Degree=Pos _ _ _ _ 31 expression expression NOUN NN Number=Sing _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 selenium selenium NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 9438 # text = The effects of selenium were specific for NF-kappa B, since the activity of the transcription factor AP-1 was not suppressed. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 selenium selenium NOUN NN Number=Sing _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 specific specific ADJ JJ Degree=Pos _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B B NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 since since SCONJ IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 not not PART RB _ _ _ _ _ 25 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 9439 # text = These data suggest that selenium supplementation may be used to modulate the expression of NF-kappa B target genes and HIV-1. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 selenium selenium NOUN NN Number=Sing _ _ _ _ 6 supplementation supplementation NOUN NN Number=Sing _ _ _ _ 7 may may AUX MD VerbForm=Fin _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 target target NOUN NN Number=Sing _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9440 # text = Document 0030011840 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011840 0030011840 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9441 # text = Soluble factors secreted by activated T-lymphocytes modulate the transcription of the immunosuppressive cytokine TGF-beta 2 in glial cells. 1 Soluble Soluble ADJ JJ Degree=Pos _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 secreted secret VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 8 modulate modulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 14 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 15 TGF TGF NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 beta beta NOUN NN Number=Sing _ _ _ _ 18 2 2 NUM CD NumType=Card _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 glial glial ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9442 # text = Coordination of the immune response to injury or disease in the brain is postulated to involve bi-directional discourse between the immune system and the central nervous system. 1 Coordination coordination NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 immune immune ADJ JJ Degree=Pos _ _ _ _ 5 response response NOUN NN Number=Sing _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 injury injury NOUN NN Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 disease disease NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 brain brain NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 postulated postulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 involve involve VERB VB VerbForm=Inf _ _ _ _ 17 bi-directional bi-directional ADJ JJ Degree=Pos _ _ _ _ 18 discourse discourse NOUN NN Number=Sing _ _ _ _ 19 between between ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 immune immune ADJ JJ Degree=Pos _ _ _ _ 22 system system NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 central central ADJ JJ Degree=Pos _ _ _ _ 26 nervous nervous ADJ JJ Degree=Pos _ _ _ _ 27 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 9443 # text = This cross communication involves soluble mediators, including various growth factors, cytokines, and neuropeptides. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 cross cross NOUN NN Number=Sing _ _ _ _ 3 communication communication NOUN NN Number=Sing _ _ _ _ 4 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 6 mediators mediator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 including include VERB VBG VerbForm=Ger _ _ _ _ 9 various various ADJ JJ Degree=Pos _ _ _ _ 10 growth growth NOUN NN Number=Sing _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 neuropeptides neuropeptide NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 9444 # text = In this report, we demonstrate that the supernatant from activated T-lymphocytes is able to induce the transcription of a potent cytokine, TGF-beta 2 in glial cells. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 supernatant supernatant NOUN NN Number=Sing _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 able able ADJ JJ Degree=Pos _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 induce induce VERB VB VerbForm=Inf _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 potent potent NOUN NN Number=Sing _ _ _ _ 23 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 TGF TGF NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 beta beta NOUN NN Number=Sing _ _ _ _ 28 2 2 NUM CD NumType=Card _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 glial glial ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 9445 # text = The activating stimulus invokes signaling mechanisms distinct from known kinase or protease pathways. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activating activating VERB VBG VerbForm=Ger _ _ _ _ 3 stimulus stimulus NOUN NN Number=Sing _ _ _ _ 4 invokes invoke NOUN NNS Number=Plur _ _ _ _ 5 signaling signale VERB VBG VerbForm=Ger _ _ _ _ 6 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 7 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 known known VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 kinase kinase NOUN NN Number=Sing _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 protease protease NOUN NN Number=Sing _ _ _ _ 13 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 9446 # text = Activation of TGF-beta 2 transcription correlates with the loss of binding activity for an 80 kDA glial labile repressor protein, GLRP, to a responsive region within the TFG-beta 2 promoter. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 beta beta NOUN NN Number=Sing _ _ _ _ 6 2 2 NUM CD NumType=Card _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 correlates correlate NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 loss loss NOUN NN Number=Sing _ _ _ _ 12 of of SCONJ IN _ _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 80 80 NUM CD NumType=Card _ _ _ _ 18 kDA kDa NOUN NN Number=Sing _ _ _ _ 19 glial glial ADJ JJ Degree=Pos _ _ _ _ 20 labile labile NOUN NN Number=Sing _ _ _ _ 21 repressor repressor NOUN NN Number=Sing _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 GLRP GLRP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 29 region region NOUN NN Number=Sing _ _ _ _ 30 within within ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 TFG Tfg NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 beta beta NOUN NN Number=Sing _ _ _ _ 35 2 2 NUM CD NumType=Card _ _ _ _ 36 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 9447 # text = Although GLRP shares some characteristics with the inducible transcription factor AP-1, it appears to be distinct from known AP-1 family members. 1 Although although SCONJ IN _ _ _ _ _ 2 GLRP GLRP PROPN NNP Number=Sing _ _ _ _ 3 shares share VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 some some DET DT _ _ _ _ _ 5 characteristics characteristic NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 16 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 family family NOUN NN Number=Sing _ _ _ _ 26 members member NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 9448 # text = These data along with previous observations demonstrating the potent immunosuppressive activity of TGF-beta 2, support a model for a feedback mechanism between the activated T-lymphocytes and astrocytes via TGF-beta 2 to regulate the immune response. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 along along ADV RB _ _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 previous previous ADJ JJ Degree=Pos _ _ _ _ 6 observations observation NOUN NNS Number=Plur _ _ _ _ 7 demonstrating demonstrate VERB VBG VerbForm=Ger _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 potent potent NOUN NN Number=Sing _ _ _ _ 10 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 beta beta NOUN NN Number=Sing _ _ _ _ 16 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 support support VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 model model NOUN NN Number=Sing _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 feedback feedback NOUN NN Number=Sing _ _ _ _ 24 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 25 between between ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 astrocytes astrocyte NOUN NNS Number=Plur _ _ _ _ 32 via via ADP IN _ _ _ _ _ 33 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 beta beta NOUN NN Number=Sing _ _ _ _ 36 2 2 NUM CD NumType=Card _ _ _ _ 37 to to PART TO _ _ _ _ _ 38 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 immune immune ADJ JJ Degree=Pos _ _ _ _ 41 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9449 # text = Document 0030011843 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011843 0030011843 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9450 # text = Distinct DNase-I hypersensitive sites are associated with TAL-1 transcription in erythroid and T-cell lines. 1 Distinct distinct ADJ JJ Degree=Pos _ _ _ _ 2 DNase DNase NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 5 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 6 sites site NOUN NNS Number=Plur _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 TAL Tal NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 erythroid erythroid NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9451 # text = The tal-1 gene, frequently activated in human T-cell acute lymphoblastic leukemia (T-ALL), is expressed in the erythroid, megakaryocytic, and mast cell lineages during normal hematopoiesis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 tal tal NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 frequently frequently ADV RB _ _ _ _ _ 8 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 acute acute NOUN NN Number=Sing _ _ _ _ 14 lymphoblastic lymphoblastic ADJ JJ Degree=Pos _ _ _ _ 15 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 T t PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 ALL All PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 erythroid erythroid NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 mast mast VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 lineages lineage NOUN NNS Number=Plur _ _ _ _ 34 during during ADP IN _ _ _ _ _ 35 normal normal ADJ JJ Degree=Pos _ _ _ _ 36 hematopoiesis hematopoiesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 9452 # text = To gain further insight into the molecular mechanisms that control tal-1 expression, we investigated tal-1 chromatin structure in erythroid/megakaryocytic cell lines and in T-cell lines either with or without tal-1 rearrangements. 1 To to PART TO _ _ _ _ _ 2 gain gain VERB VB VerbForm=Inf _ _ _ _ 3 further further ADV RB _ _ _ _ _ 4 insight insight ADV RB _ _ _ _ _ 5 into into ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 8 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 control control VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 tal tal NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 17 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 tal tal NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 22 structure structure NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 / / PUNCT , _ _ _ _ SpaceAfter=No 26 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 lines line NOUN NNS Number=Plur _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 lines line NOUN NNS Number=Plur _ _ _ _ 34 either either CCONJ CC _ _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 or or CCONJ CC _ _ _ _ _ 37 without without ADP IN _ _ _ _ _ 38 tal tal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 1 1 NUM CD NumType=Card _ _ _ _ 41 rearrangements rearrangement NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 9453 # text = Tal-1 transcription was shown to be monoallelic in Jurkat, a T-cell line that expresses tal-1 in the absence of apparent genomic alteration of the locus. 1 Tal Tal PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 monoallelic monoallelic ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 line line NOUN NN Number=Sing _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 expresses express VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 tal tal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 absence absence NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 apparent apparent ADJ JJ Degree=Pos _ _ _ _ 27 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 28 alteration alteration NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 locus locus NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 9454 # text = Methylation studies indicated that the tal-15' GC-rich region behaves like a CpG island, hypomethylated in normal cells, and methylated de novo on transcriptionally inactive alleles in established cell lines. 1 Methylation Methylation NOUN NN Number=Sing _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 tal tal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 -15 -15 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ' ' PUNCT `` _ _ _ _ _ 9 GC Gc NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 rich rich ADJ JJ Degree=Pos _ _ _ _ 12 region region NOUN NN Number=Sing _ _ _ _ 13 behaves behave NOUN NNS Number=Plur _ _ _ _ 14 like like ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 CpG CpG PROPN NNP Number=Sing _ _ _ _ 17 island island NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 hypomethylated hypomethylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 normal normal ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 methylated methylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 de de X FW Foreign=Yes _ _ _ _ 27 novo novo ADV RB _ _ _ _ _ 28 on on ADP IN _ _ _ _ _ 29 transcriptionally transcriptionally ADV RB _ _ _ _ _ 30 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 31 alleles allele NOUN NNS Number=Plur _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 established establish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 9455 # text = Five major DNase-I hypersensitive sites (HS) were mapped in the tal-1 locus. 1 Five five NUM CD NumType=Card _ _ _ _ 2 major major ADJ JJ Degree=Pos _ _ _ _ 3 DNase DNase NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 7 sites site NOUN NNS Number=Plur _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 HS H PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 mapped map VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 tal tal NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 locus locus NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 9456 # text = HS I, IV, and V were exclusively observed in the erythroid/megakaryocytic cell lines that express tal-1 from the promoters 1a and 1b. 1 HS h VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 2 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 IV iv NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 V V PROPN NNP Number=Sing _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 exclusively exclusively ADV RB _ _ _ _ _ 10 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 lines line NOUN NNS Number=Plur _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 tal tal NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 promoters promoter NOUN NNS Number=Plur _ _ _ _ 26 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 a a NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 b b NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 9457 # text = HS II was weak in hematopoietic cell lines, absent in Hela, and greatly enhanced in Jurkat, suggesting that this region might be implicated in the cis-activation of tal-1 promoter 1b in this cell line. 1 HS HS PROPN NNP Number=Sing _ _ _ _ 2 II II PROPN NNP Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 weak weak ADJ JJ Degree=Pos _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 absent absent VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 Hela Hela PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 greatly greatly ADV RB _ _ _ _ _ 16 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 23 region region NOUN NN Number=Sing _ _ _ _ 24 might might AUX MD VerbForm=Fin _ _ _ _ 25 be be AUX VB VerbForm=Inf _ _ _ _ 26 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 cis-activation cis-activation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 tal tal NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 promoter promoter NOUN NN Number=Sing _ _ _ _ 35 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 b b NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 9458 # text = HS III was weak in HEL and Jurkat, and greatly enhanced in DU528, a T-cell line that bears a t (1;14) and initiates tal-1 transcription within exon 4. 1 HS HS PROPN NNP Number=Sing _ _ _ _ 2 III III PROPN NNP Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 weak weak ADJ JJ Degree=Pos _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 HEL HEL PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 greatly greatly ADV RB _ _ _ _ _ 12 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 DU528 DU528 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 line line NOUN NN Number=Sing _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 bears bear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 t t NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 1;14 1;14 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 initiates initiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 tal tal NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 transcription transcription NOUN NN Number=Sing _ _ _ _ 33 within within ADP IN _ _ _ _ _ 34 exon exon NOUN NN Number=Sing _ _ _ _ 35 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 9459 # text = These results suggest that distinct regulatory elements are associated with the use of the different tal-1 promoters. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 6 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 7 elements element NOUN NNS Number=Plur _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 use use NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 different different ADJ JJ Degree=Pos _ _ _ _ 16 tal tal NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9460 # text = Document 0030011846 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011846 0030011846 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9461 # text = The tax protein of human T-cell leukemia virus type 1 mediates the transactivation of the c-sis/platelet-derived growth factor-B promoter through interactions with the zinc finger transcription factors Sp1 and NGFI-A/Egr-1. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 tax tax NOUN NN Number=Sing _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 9 virus virus NOUN NN Number=Sing _ _ _ _ 10 type type NOUN NN Number=Sing _ _ _ _ 11 1 1 NUM CD NumType=Card _ _ _ _ 12 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 c- c- SYM SYM _ _ _ _ SpaceAfter=No 18 sis/ sisith SYM SYM _ _ _ _ SpaceAfter=No 19 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 growth growth NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 B b NOUN NN Number=Sing _ _ _ _ 26 promoter promoter NOUN NN Number=Sing _ _ _ _ 27 through through ADP IN _ _ _ _ _ 28 interactions interaction NOUN NNS Number=Plur _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 zinc zinc NOUN NN Number=Sing _ _ _ _ 32 finger finger NOUN NN Number=Sing _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 factors factor NOUN NNS Number=Plur _ _ _ _ 35 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 NGFI NGFI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 A A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 41 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9462 # text = Transcriptional up-regulation of the c-sis/platelet-derived growth factor-B (PDGF-B) proto-oncogene by the Tax protein of human T-cell leukemia virus type 1 has been implicated as one possible mechanism of cellular transformation by human T-cell leukemia virus type 1. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 c- c- SYM NFP _ _ _ _ SpaceAfter=No 8 sis/ sis/ SYM NFP _ _ _ _ SpaceAfter=No 9 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 growth growth NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 B b NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 PDGF Pdgf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 proto proto PART TO _ _ _ _ SpaceAfter=No 22 -oncogene -oncogene VERB VB VerbForm=Inf _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 Tax tax NOUN NN Number=Sing _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 32 virus virus NOUN NN Number=Sing _ _ _ _ 33 type type NOUN NN Number=Sing _ _ _ _ 34 1 1 NUM CD NumType=Card _ _ _ _ 35 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 37 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 as as ADP IN _ _ _ _ _ 39 one one NUM CD NumType=Card _ _ _ _ 40 possible possible ADJ JJ Degree=Pos _ _ _ _ 41 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 44 transformation transformation NOUN NN Number=Sing _ _ _ _ 45 by by ADP IN _ _ _ _ _ 46 human human ADJ JJ Degree=Pos _ _ _ _ 47 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 cell cell NOUN NN Number=Sing _ _ _ _ 49 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 50 virus virus NOUN NN Number=Sing _ _ _ _ 51 type type NOUN NN Number=Sing _ _ _ _ 52 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 9463 # text = In previous work, we identified an essential site in the c-sis/PDGF-B promoter, Tax-responsive element 1 (TRE1), necessary for transactivation by Tax. 1 In in ADP IN _ _ _ _ _ 2 previous previous ADJ JJ Degree=Pos _ _ _ _ 3 work work NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 essential essential ADJ JJ Degree=Pos _ _ _ _ 9 site site NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 c-sis/PDGF c-sis/pdgf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 B b NOUN NN Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 20 element element NOUN NN Number=Sing _ _ _ _ 21 1 1 NUM CD NumType=Card _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 TRE1 TRE1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 Tax tax PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 9464 # text = We also identified Sp1, Sp3, and NGFI-A/Egr-1 as the primary nuclear transcription factors binding to TRE1 which mediate Tax responsiveness. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 Sp1 Sp1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 Sp3 Sp3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 NGFI NGFI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 A a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 13 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 primary primary ADJ JJ Degree=Pos _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factors factor NOUN NNS Number=Plur _ _ _ _ 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 TRE1 TRE1 PROPN NNP Number=Sing _ _ _ _ 25 which which PRON WDT PronType=Rel _ _ _ _ 26 mediate mediate ADJ JJ Degree=Pos _ _ _ _ 27 Tax tax NOUN NN Number=Sing _ _ _ _ 28 responsiveness responsiveness NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 9465 # text = In the present work, we have investigated the mechanism(s) whereby Tax transactivates the c-sis/PDGF-B proto-oncogene. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 work work NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 s s X AFX _ _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 whereby whereby ADJ JJ Degree=Pos _ _ _ _ 15 Tax Tax NOUN NN Number=Sing _ _ _ _ 16 transactivates transactivate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 c-sis/PDGF c-sis/pdgf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 B b NOUN NN Number=Sing _ _ _ _ 21 proto-oncogene proto-oncogene NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 9466 # text = In vitro transcription assays showed that Tax was able to significantly increase the transcriptional activity of a template containing the -257 to +74 region of the c-sis/PDGF-B promoter. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 assays assays NOUN NNS Number=Plur _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 Tax Tax PROPN NNP Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 able able ADJ JJ Degree=Pos _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 significantly significantly ADV RB _ _ _ _ _ 12 increase increase VERB VB VerbForm=Inf _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 template template NOUN NN Number=Sing _ _ _ _ 19 containing contain VERB VBG VerbForm=Ger _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 - - SYM SYM _ _ _ _ SpaceAfter=No 22 257 257 NUM CD NumType=Card _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 + + SYM SYM _ _ _ _ SpaceAfter=No 25 74 74 NUM CD NumType=Card _ _ _ _ 26 region region NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 c-sis/PDGF-B c-sis/pdgf-b ADJ JJ Degree=Pos _ _ _ _ 30 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 9467 # text = Electrophoretic mobility shift assay analysis showed that Tax increased the DNA binding activity of both Sp1 and NGFI-A/Egr-1 using a TRE1 probe. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assay assay NOUN NN Number=Sing _ _ _ _ 5 analysis analysis NOUN NN Number=Sing _ _ _ _ 6 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 Tax Tax PROPN NNP Number=Sing _ _ _ _ 9 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 DNA dna NOUN NN Number=Sing _ _ _ _ 12 binding binde VERB VBG VerbForm=Ger _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 both both CCONJ CC _ _ _ _ _ 16 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 NGFI NGFI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 A A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 22 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 using use VERB VBG VerbForm=Ger _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 TRE1 tRE1 NUM CD NumType=Card _ _ _ _ 28 probe probe NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 9468 # text = Analysis of Tax mutants showed that two mutants, IEXC29S and IEXL320G, were unable to significantly transactivate the c-sis/PDGF-B promoter. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Tax tax PROPN NNP Number=Sing _ _ _ _ 4 mutants mutant NOUN NNS Number=Plur _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 mutants mutant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 IEXC29 IEXC29 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 S S PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 IEXL320G IEXL320G PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 unable unable ADJ JJ Degree=Pos _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 significantly significantly ADV RB _ _ _ _ _ 19 transactivate transactivate VERB VB VerbForm=Inf _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 c-sis/PDGF c-sis/pdgf NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 B b NOUN NN Number=Sing _ _ _ _ 24 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 9469 # text = Finally, co-immunoprecipitation analysis revealed that Tax is able to stably bind to both Sp1 and NGFI-A/Egr-1. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 co-immunoprecipitation co-immunoprecipitation NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 Tax tax PROPN NNP Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 able able ADJ JJ Degree=Pos _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 stably stably ADV RB _ _ _ _ _ 12 bind bind VERB VB VerbForm=Inf _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 both both CCONJ CC _ _ _ _ _ 15 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 NGFI NGFI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 A A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 21 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 9470 # text = Interestingly, co-immunoprecipitation analysis also revealed that Tax mutant IEXC29S is unable to interact with NGFI-A/Egr-1, whereas Tax mutant IEXL320G is able to interact with NGFI-A/Egr-1. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 co-immunoprecipitation co-immunoprecipitation NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 Tax tax PROPN NNP Number=Sing _ _ _ _ 9 mutant mutant PROPN NNP Number=Sing _ _ _ _ 10 IEXC29 IEXC29 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 S S PROPN NNP Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 unable unable ADJ JJ Degree=Pos _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 interact interact VERB VB VerbForm=Inf _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 NGFI NGFI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 A A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 21 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 whereas whereas SCONJ IN _ _ _ _ _ 26 Tax tax NOUN NN Number=Sing _ _ _ _ 27 mutant mutant NOUN NN Number=Sing _ _ _ _ 28 IEXL320G Iexl320g NOUN NN Number=Sing _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 able able ADJ JJ Degree=Pos _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 interact interact VERB VB VerbForm=Inf _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 NGFI NGFI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 A A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 38 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9471 # text = Document 0030011848 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011848 0030011848 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9472 # text = An IRF-1-dependent pathway of DNA damage-induced apoptosis in mitogen-activated T lymphocytes. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 IRF IRF NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 7 pathway pathway NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 DNA dna NOUN NN Number=Sing _ _ _ _ 10 damage damage NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9473 # text = Lymphocytes are particularly susceptible to DNA damage-induced apoptosis, a response which may serve as a form of 'altruistic suicide' to counter their intrinsic high potential for mutation and clonal expansion. 1 Lymphocytes Lymphocyte NOUN NNS Number=Plur _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 particularly particularly ADV RB _ _ _ _ _ 4 susceptible susceptible ADJ JJ Degree=Pos _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 DNA Dna NOUN NN Number=Sing _ _ _ _ 7 damage damage NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 response response NOUN NN Number=Sing _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 may may AUX MD VerbForm=Fin _ _ _ _ 16 serve serve VERB VB VerbForm=Inf _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 form form NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 'altruistic 'altruistic ADJ JJ Degree=Pos _ _ _ _ 22 suicide suicide NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ' ' PUNCT '' _ _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 counter counter VERB VB VerbForm=Inf _ _ _ _ 26 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 27 intrinsic intrinsic ADJ JJ Degree=Pos _ _ _ _ 28 high high ADJ JJ Degree=Pos _ _ _ _ 29 potential potential NOUN NN Number=Sing _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 mutation mutation NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 clonal clonal ADJ JJ Degree=Pos _ _ _ _ 34 expansion expansion NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 9474 # text = The tumour suppressor p53 has been shown to regulate this type of apoptosis in thymocytes, but an as yet unknown, p53-independent pathway(s) appears to mediate the same event in mitogen-activated mature T lymphocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 tumour tumour NOUN NN Number=Sing _ _ _ _ 3 suppressor suppressor NOUN NN Number=Sing _ _ _ _ 4 p53 p53 NOUN NN Number=Sing _ _ _ _ 5 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 7 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 type type NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 as as ADP IN _ _ _ _ _ 20 yet yet ADV RB _ _ _ _ _ 21 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 p53 p53 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 -independent -independent ADJ JJ Degree=Pos _ _ _ _ 25 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 s s X AFX _ _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 to to PART TO _ _ _ _ _ 31 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 same same ADJ JJ Degree=Pos _ _ _ _ 34 event event NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 - - PUNCT , _ _ _ _ SpaceAfter=No 38 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 mature mature ADJ JJ Degree=Pos _ _ _ _ 40 T t PROPN NNP Number=Sing _ _ _ _ 41 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 9475 # text = Here we show DNA damage-induced apoptosis in these T lymphocytes is dependent on the antioncogenic transcription factor interferon regulatory factor (IRF)-1. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ _ 5 damage damage NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 antioncogenic antioncogenic ADJ JJ Degree=Pos _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 interferon interferon ADP IN _ _ _ _ _ 21 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 - - SYM SYM _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 9476 # text = Thus two different anti-onco-genic transcription factors, p53 and IRF-1, are required for distinct apoptotic pathways in T lymphocytes. 1 Thus thus ADV RB _ _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 different different ADJ JJ Degree=Pos _ _ _ _ 4 anti-onco anti-onco X AFX _ _ _ _ SpaceAfter=No 5 -genic -genic ADJ JJ Degree=Pos _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 p53 p53 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 IRF Irf NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 19 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 20 pathways pathway NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 9477 # text = We also show that mitogen induction of the interleukin-1 beta converting enzyme (ICE) gene, a mammalian homologue of the Caenorhabditis elegans cell death gene ced-3, is IRF-1-dependent. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 mitogen mitogen NUM CD NumType=Card _ _ _ _ 6 induction induction NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 beta beta NOUN NN Number=Sing _ _ _ _ 13 converting converte VERB VBG VerbForm=Ger _ _ _ _ 14 enzyme enzyme NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 ICE ice NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 22 homologue homologue NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 Caenorhabditis Caenorhabditis PROPN NNP Number=Sing _ _ _ _ 26 elegans elegans PROPN NNPS Number=Plur _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 death death NOUN NN Number=Sing _ _ _ _ 29 gene gene NOUN NN Number=Sing _ _ _ _ 30 ced ce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 31 -3 -3 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 9478 # text = Ectopic overexpression of IRF-1 results in the activation of the endogenous gene for ICE and enhances the sensitivity of cells to radiation-induced apoptosis. 1 Ectopic Ectopic ADJ JJ Degree=Pos _ _ _ _ 2 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 results result NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 ICE ice PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 enhances enhance VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 radiation radiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9479 # text = Document 0030011851 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011851 0030011851 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9480 # text = Effects of CD45 on NF-kappa B. 1 Effects Effects PROPN NNPS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 CD45 CD45 PROPN NNP Number=Sing _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 9481 # text = Implications for replication of HIV-1. 1 Implications implication NOUN NNS Number=Plur _ _ _ _ 2 for for ADP IN _ _ _ _ _ 3 replication replication NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9482 # text = Increased levels of replication of the HIV type 1 are observed after the activation of infected T cells through the TCR. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 replication replication NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 HIV HIV PROPN NNP Number=Sing _ _ _ _ 8 type type NOUN NN Number=Sing _ _ _ _ 9 1 1 NUM CD NumType=Card _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 after after ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 through through ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 TCR Tcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 9483 # text = However, anti-CD45 antibodies inhibit these effects in cells from infected individuals. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 anti-CD45 anti-CD45 NUM CD NumType=Card _ _ _ _ 4 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 5 inhibit inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 effects effect NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 9484 # text = In this study, we examined interrelationships between CD45 and HIV-1 further. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 interrelationships interrelationship NOUN NNS Number=Plur _ _ _ _ 8 between between ADP IN _ _ _ _ _ 9 CD45 CD45 PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 further further NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 9485 # text = We measured effects on the HIV-1 LTR in T cell lines that were stimulated with antibodies against CD45 and in those that lacked the expression of CD45 on their surfaces. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 measured measure VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 effects effect NOUN NNS Number=Plur _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 LTR Ltr NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 lines line NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 19 against against ADP IN _ _ _ _ _ 20 CD45 CD45 PROPN NNP Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 lacked lack VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 CD45 CD45 PROPN NNP Number=Sing _ _ _ _ 30 on on ADP IN _ _ _ _ _ 31 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 32 surfaces surface NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 9486 # text = First, anti-CD45 antibodies did not affect basal but decreased activated levels of expression from the HIV-1 LTR. 1 First first ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 anti-CD45 anti-CD45 NUM CD NumType=Card _ _ _ _ 4 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 5 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 affect affect VERB VB VerbForm=Inf _ _ _ _ 8 basal basal ADJ JJ Degree=Pos _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 levels level NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 LTR. LTR. NOUN NN Number=Sing _ _ _ _ # sent_id = 9487 # text = Second, T cells, which lack CD45 and cannot signal via the TCR, supported higher levels of viral replication and gene expression. 1 Second second ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 lack lack VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 CD45 Cd45 PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 11 not not PART RB _ _ _ _ _ 12 signal signal VERB VB VerbForm=Inf _ _ _ _ 13 via via ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 TCR Tcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 supported support VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 higher higher ADJ JJR Degree=Cmp _ _ _ _ 19 levels level NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 viral viral ADJ JJ Degree=Pos _ _ _ _ 22 replication replication NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 9488 # text = This was due to the presence of active NF-kappa B complexes in the nucleus of CD45- T cells. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 due due ADP IN _ _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 presence presence NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 active active ADJ JJ Degree=Pos _ _ _ _ 9 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 complexes complex NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 CD45 CD45 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 9489 # text = Additionally, infected T cells displayed lower levels of CD45 on their surfaces. 1 Additionally additionally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 displayed display VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 lower lower ADJ JJR Degree=Cmp _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 CD45 CD45 PROPN NNP Number=Sing _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 surfaces surface NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 9490 # text = Thus, CD45 plays an active role in the physiology of T cells and in the replication of HIV-1. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 CD45 CD45 PROPN NNP Number=Sing _ _ _ _ 4 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 active active ADJ JJ Degree=Pos _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 physiology physiology NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 replication replication NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9491 # text = Document 0030011855 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011855 0030011855 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9492 # text = Astrocytes and glioblastoma cells express novel octamer-DNA binding proteins distinct from the ubiquitous Oct-1 and B cell type Oct-2 proteins. 1 Astrocytes Astrocyte NOUN NNS Number=Plur _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 glioblastoma glioblastoma NOUN NN Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 express express ADJ JJ Degree=Pos _ _ _ _ 6 novel novel NOUN NN Number=Sing _ _ _ _ 7 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 DNA dna NOUN NN Number=Sing _ _ _ _ 10 binding binding VERB VBG VerbForm=Ger _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 16 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 type type NOUN NN Number=Sing _ _ _ _ 23 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ _ 26 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9493 # text = The 'octamer' sequence, ATGCAAAT or its complement ATTTGCAT, is a key element for the transcriptional regulation of immunoglobulin genes in B-lymphocytes as well as a number of housekeeping genes in all cell types. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 3 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 ' ' PUNCT '' _ _ _ _ _ 5 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 ATGCAAAT Atgcaaat NOUN NN Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 10 complement complement NOUN NN Number=Sing _ _ _ _ 11 ATTTGCAT Atttgcat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 key key ADJ JJ Degree=Pos _ _ _ _ 16 element element NOUN NN Number=Sing _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 20 regulation regulation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 23 genes gene NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 B B ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 28 as as ADV RB _ _ _ _ _ 29 well well ADV RB Degree=Pos _ _ _ _ 30 as as ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 number number NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 housekeeping housekeeping NOUN NN Number=Sing _ _ _ _ 35 genes gene NOUN NNS Number=Plur _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 all all DET DT _ _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 9494 # text = In lymphocytes, the octamer-binding protein Oct-2A and variants thereof are thought to contribute to the B-cell specific gene expression, while the ubiquitous protein Oct-1 seems to control general octamer site-dependent transcription. 1 In in ADP IN _ _ _ _ _ 2 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 octamer-binding octamer-binding ADJ JJ Degree=Pos _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 Oct-2 Oct-2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 A a NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 variants variant NOUN NNS Number=Plur _ _ _ _ 11 thereof thereof CCONJ CC Typo=Yes _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 specific specific ADJ JJ Degree=Pos _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 while while SCONJ IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 28 protein protein NOUN NN Number=Sing _ _ _ _ 29 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 to to PART TO _ _ _ _ _ 34 control control VERB VB VerbForm=Inf _ _ _ _ 35 general general ADJ JJ Degree=Pos _ _ _ _ 36 octamer octamer NOUN NN Number=Sing _ _ _ _ 37 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 40 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 9495 # text = Various other genes, for example interleukin-1 and MHC class II genes, contain an octamer sequence in the promoter and are expressed in cells of both the immune and nervous systems. 1 Various various ADJ JJ Degree=Pos _ _ _ _ 2 other other ADJ JJ Degree=Pos _ _ _ _ 3 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 example example NOUN NN Number=Sing _ _ _ _ 7 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 MHC MHC PROPN NNP Number=Sing _ _ _ _ 12 class class NOUN NN Number=Sing _ _ _ _ 13 II ii NUM CD NumType=Card _ _ _ _ 14 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 octamer octamer ADJ JJ Degree=Pos _ _ _ _ 19 sequence sequence NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 both both CCONJ CC _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 immune immune ADJ JJ Degree=Pos _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 nervous nervous ADJ JJ Degree=Pos _ _ _ _ 34 systems system NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 9496 # text = This prompted us to analyze the octamer-binding proteins in the latter cells. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 prompted prompt VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 us we PRON PRP Case=Acc|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 analyze analyze VERB VB VerbForm=Inf _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 latter latter ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 9497 # text = Using the electrophoretic mobility shift assay, at least six novel octamer binding proteins were detected in nuclear extracts of cultured mouse astrocytes. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 4 mobility mobility NOUN NN Number=Sing _ _ _ _ 5 shift shift NOUN NN Number=Sing _ _ _ _ 6 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 at at ADV RB _ _ _ _ _ 9 least least ADV RBS Degree=Sup _ _ _ _ 10 six six NUM CD NumType=Card _ _ _ _ 11 novel novel NOUN NN Number=Sing _ _ _ _ 12 octamer octamer NOUN NN Number=Sing _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 proteins protein NOUN NNS Number=Plur _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 extracts extract NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 cultured culture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 mouse mouse NOUN NN Number=Sing _ _ _ _ 23 astrocytes astrocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 9498 # text = These proteins are differentially expressed in human glioblastoma and neuroblastoma cell lines. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 proteins protein NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 differentially differentially ADV RB _ _ _ _ _ 5 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 glioblastoma glioblastoma NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 neuroblastoma neuroblastoma NOUN NN Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 9499 # text = The nervous system-derived (N-Oct) proteins bound to the octamer DNA sequence in a manner which is indistinguishable from the Oct-1 and Oct-2A proteins. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 nervous nervous ADJ JJ Degree=Pos _ _ _ _ 3 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 derived derive NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 N N PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 bound bound ADJ JJ Degree=Pos _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 octamer octamer NOUN NN Number=Sing _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ _ 17 sequence sequence NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 manner manner NOUN NN Number=Sing _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 indistinguishable indistinguishable ADJ JJ Degree=Pos _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 -1 -1 NUM CD NumType=Card _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2A 2A PROPN NNP Number=Sing _ _ _ _ 32 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 9500 # text = The relationship of the N-Oct proteins to Oct-1 and Oct-2A was analyzed by proteolytic clipping bandshift assays and by their reactivity towards antisera raised against recombinant Oct-1 and Oct-2A proteins. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 relationship relationship NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 N N PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 Oct Oct PROPN NNP Number=Sing _ _ _ _ 8 proteins protein NOUN NNS Number=Plur _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 Oct-2A Oct-2A PROPN NNP Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 proteolytic proteolytic ADJ JJ Degree=Pos _ _ _ _ 19 clipping clipping NOUN NN Number=Sing _ _ _ _ 20 bandshift bandshift VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 assays assays NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 25 reactivity reactivity NOUN NN Number=Sing _ _ _ _ 26 towards towards ADP IN _ _ _ _ _ 27 antisera antisera NOUN NN Number=Sing _ _ _ _ 28 raised raise VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 against against ADP IN _ _ _ _ _ 30 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 31 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 -1 -1 NUM CD NumType=Card _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 2A 2A PROPN NNP Number=Sing _ _ _ _ 37 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 9501 # text = On the basis of these assays, all N-Oct-factors were found to be distinct from the ubiquitous Oct-1 and the lymphoid-specific Oct-2A proteins. 1 On on ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 basis basis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 all all DET DT _ _ _ _ _ 9 N N PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 factors factor NOUN NNS Number=Plur _ _ _ _ 14 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 22 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 specific specific ADJ JJ Degree=Pos _ _ _ _ 30 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 A a NOUN NN Number=Sing _ _ _ _ 34 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 9502 # text = In melanoma cells that contain the N-Oct-3 factor, a transfected lymphocyte-specific promoter was neither activated nor was it repressed upon contransfection with an Oct-2A expression vector. 1 In in ADP IN _ _ _ _ _ 2 melanoma melanoma ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 3 3 NUM CD NumType=Card _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 neither neither ADV RB _ _ _ _ _ 21 activated activated VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 nor nor CCONJ CC _ _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 25 repressed repress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 upon upon ADP IN _ _ _ _ _ 27 contransfection contransfection NOUN NN Number=Sing _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ _ 35 vector vector NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 9503 # text = We therefore speculate that N-Oct-3 and other N-Oct factors have a specific role in gene expression in cells of the nervous system. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 therefore therefore ADV RB _ _ _ _ _ 3 speculate speculate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 N- N- SYM NFP _ _ _ _ SpaceAfter=No 6 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 3 3 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 other other ADJ JJ Degree=Pos _ _ _ _ 11 N N PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 Oct Oct PROPN NNP Number=Sing _ _ _ _ 14 factors factor NOUN NNS Number=Plur _ _ _ _ 15 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 role role NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 gene gene ADJ JJ Degree=Pos _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 nervous nervous ADJ JJ Degree=Pos _ _ _ _ 27 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9504 # text = Document 0030011857 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011857 0030011857 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9505 # text = CD40 is a functional activation antigen and B7-independent T cell costimulatory molecule on normal human lung fibroblasts. 1 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 functional functional ADJ JJ Degree=Pos _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 antigen antigen NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 B7 B7 NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 independent independent ADJ JJ Degree=Pos _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cell cell VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 14 molecule molecule NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 normal normal ADJ JJ Degree=Pos _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 lung lung NOUN NN Number=Sing _ _ _ _ 19 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9506 # text = CD40 is an important signaling and activation 1 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 important important ADJ JJ Degree=Pos _ _ _ _ 5 signaling signaling NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ # sent_id = 9507 # text = Ag found on certain bone marrow-derived cells. 1 Ag ag PROPN NNP Number=Sing _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 on on ADP IN _ _ _ _ _ 4 certain certain ADJ JJ Degree=Pos _ _ _ _ 5 bone bone NOUN NN Number=Sing _ _ _ _ 6 marrow marrow NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 9508 # text = Recently, CD40 also has been shown to be expressed by mesenchymal cells, including human fibroblasts. 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 7 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 mesenchymal mesenchymal ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 including include VERB VBG VerbForm=Ger _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 9509 # text = Little is known about the role of CD40 in fibroblasts. 1 Little little PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 about about ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 9510 # text = The current study investigates the hypothesis that CD40 expressed on lung fibroblasts is an activation structure and mechanism for interaction with hemopoietic cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 current current ADJ JJ Degree=Pos _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 investigates investigate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 9 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 lung lung NOUN NN Number=Sing _ _ _ _ 12 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 structure structure NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 interaction interaction NOUN NN Number=Sing _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 hemopoietic hemopoietic ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 9511 # text = Communication between resident tissue fibroblasts and T cells is necessary for normal wound healing, and can be pathologic, resulting in tissue fibrosis. 1 Communication communication NOUN NN Number=Sing _ _ _ _ 2 between between ADP IN _ _ _ _ _ 3 resident resident ADJ JJ Degree=Pos _ _ _ _ 4 tissue tissue NOUN NN Number=Sing _ _ _ _ 5 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 T t NOUN NN Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 normal normal ADJ JJ Degree=Pos _ _ _ _ 13 wound wound NOUN NN Number=Sing _ _ _ _ 14 healing healing NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 can can AUX MD VerbForm=Fin _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 pathologic pathologic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 resulting result VERB VBG VerbForm=Ger _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 tissue tissue NOUN NN Number=Sing _ _ _ _ 24 fibrosis fibrosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 9512 # text = Signaling through CD40 with soluble CD40 ligand stimulated fibroblast activation, as evidenced by mobilization of nuclear factor-kappaB and by induction of the proinflammatory and chemoattractant cytokines IL-6 and IL-8. IFN-gamma-primed lung fibroblasts costimulate T lymphocyte proliferation utilizing CD40, but not the well-studied costimulatory molecules B7-1 and B7-2. 1 Signaling signal VERB VBG VerbForm=Ger _ _ _ _ 2 through through ADP IN _ _ _ _ _ 3 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 6 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 7 ligand ligand NOUN NN Number=Sing _ _ _ _ 8 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 fibroblast fibroblast ADJ JJ Degree=Pos _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 as as SCONJ IN _ _ _ _ _ 13 evidenced evidence VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 mobilization mobilization NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 factor-kappaB factor-kappab NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 induction induction NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 chemoattractant chemoattractant ADJ JJ Degree=Pos _ _ _ _ 27 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 28 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - SYM SYM _ _ _ _ SpaceAfter=No 30 6 6 NUM CD NumType=Card _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ 36 IFN-gamma IFN-gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 primed prim VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 lung lung NOUN NN Number=Sing _ _ _ _ 40 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 41 costimulate costimulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 42 T t NUM CD NumType=Card _ _ _ _ 43 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 44 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 45 utilizing utilize VERB VBG VerbForm=Ger _ _ _ _ 46 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 but but CCONJ CC _ _ _ _ _ 49 not not ADV RB _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 well well ADV RB Degree=Pos _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 studied studie VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 54 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 55 molecules molecule NOUN NNS Number=Plur _ _ _ _ 56 B benefit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 57 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 58 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 59 1 1 NUM CD NumType=Card _ _ _ _ 60 and and CCONJ CC _ _ _ _ _ 61 B7 B7 NUM CD NumType=Card _ _ _ SpaceAfter=No 62 - - SYM SYM _ _ _ _ SpaceAfter=No 63 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 64 . . PUNCT . _ _ _ _ _ # sent_id = 9513 # text = Data reported herein support the hypothesis that cognate interactions between tissue fibroblasts and infiltrating T lymphocytes, via the CD40/CD40L pathway, augment inflammation and may promote fibrogenesis by activating both cell types. 1 Data data PROPN NNP Number=Sing _ _ _ _ 2 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 herein herein ADV RB _ _ _ _ _ 4 support support VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 cognate cognate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 interactions interaction NOUN NNS Number=Plur _ _ _ _ 10 between between ADP IN _ _ _ _ _ 11 tissue tissue NOUN NN Number=Sing _ _ _ _ 12 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 infiltrating infiltrat VERB VBG VerbForm=Ger _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 via via ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 CD40/CD40L Cd40/cd40l NOUN NN Number=Sing _ _ _ _ 21 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 augment augment NOUN NN Number=Sing _ _ _ _ 24 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 may may AUX MD VerbForm=Fin _ _ _ _ 27 promote promote VERB VB VerbForm=Inf _ _ _ _ 28 fibrogenesis fibrogenesis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 29 by by SCONJ IN _ _ _ _ _ 30 activating activate VERB VBG VerbForm=Ger _ _ _ _ 31 both both DET DT _ _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9514 # text = Document 0030011858 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011858 0030011858 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9515 # text = A factor that regulates the class II major histocompatibility complex gene DPA is a member of a subfamily of zinc finger proteins that includes a Drosophila developmental control protein. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 that that PRON WDT PronType=Rel _ _ _ _ 4 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 class class NOUN NN Number=Sing _ _ _ _ 7 II ii NUM CD NumType=Card _ _ _ _ 8 major major ADJ JJ Degree=Pos _ _ _ _ 9 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 10 complex complex NOUN NN Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 DPA DPA PROPN NNP Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 member member NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 subfamily subfamily NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 zinc zinc NOUN NN Number=Sing _ _ _ _ 21 finger finger NOUN NN Number=Sing _ _ _ _ 22 proteins protein NOUN NNS Number=Plur _ _ _ _ 23 that that PRON WDT PronType=Rel _ _ _ _ 24 includes include VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 Drosophila Drosophila PROPN NNP Number=Sing _ _ _ _ 27 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 28 control control NOUN NN Number=Sing _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9516 # text = A novel DNA sequence element termed the J element involved in the regulated expression of class II major histocompatibility complex genes was recently described. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 novel novel NOUN NN Number=Sing _ _ _ _ 3 DNA dna NOUN NN Number=Sing _ _ _ _ 4 sequence sequence NOUN NN Number=Sing _ _ _ _ 5 element element NOUN NN Number=Sing _ _ _ _ 6 termed term VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 J j PROPN NNP Number=Sing _ _ _ _ 9 element element NOUN NN Number=Sing _ _ _ _ 10 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 class class NOUN NN Number=Sing _ _ _ _ 17 II ii NUM CD NumType=Card _ _ _ _ 18 major major ADJ JJ Degree=Pos _ _ _ _ 19 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 20 complex complex NOUN NN Number=Sing _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 recently recently ADV RB _ _ _ _ _ 24 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 9517 # text = To study this element and its role in class II gene regulation further, a cDNA library was screened with oligonucleotide probes containing both the S element and the nearby J element of the human DPA gene. 1 To to PART TO _ _ _ _ _ 2 study study VERB VB VerbForm=Inf _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 element element NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 7 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 class class NOUN NN Number=Sing _ _ _ _ 11 II ii NUM CD NumType=Card _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 regulation regulation NOUN NN Number=Sing _ _ _ _ 14 further further ADV RB _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 18 library library NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 screened screen VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 oligonucleotide oligonucleotide ADJ JJ Degree=Pos _ _ _ _ 23 probes probe NOUN NNS Number=Plur _ _ _ _ 24 containing contain VERB VBG VerbForm=Ger _ _ _ _ 25 both both CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 S s NOUN NN Number=Sing _ _ _ _ 28 element element NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 nearby nearby ADJ JJ Degree=Pos _ _ _ _ 32 J j NOUN NN Number=Sing _ _ _ _ 33 element element NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 human human ADJ JJ Degree=Pos _ _ _ _ 37 DPA DPA PROPN NNP Number=Sing _ _ _ _ 38 gene gene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 9518 # text = Several DNA clones were obtained by this procedure, one of which, clone 18, is reported and characterized here. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ _ 3 clones clone NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 obtained obtain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 procedure procedure NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 one one NUM CD NumType=Card _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 which which PRON WDT PronType=Int _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 clone clone NOUN NN Number=Sing _ _ _ _ 15 18 18 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 9519 # text = It encodes a protein predicted to contain 688 amino acid residues, including 11 zinc finger motifs of the C2H2 type in the C-terminal region, that are Kruppel-like in the conservation of the H/C link sequence connecting them. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 predicted predict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 contain contain VERB VB VerbForm=Inf _ _ _ _ 8 688 688 NUM CD NumType=Card _ _ _ _ 9 amino amino DET DT _ _ _ _ _ 10 acid acid ADJ JJ Degree=Pos _ _ _ _ 11 residues residue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 including include VERB VBG VerbForm=Ger _ _ _ _ 14 11 11 NUM CD NumType=Card _ _ _ _ 15 zinc zinc NOUN NN Number=Sing _ _ _ _ 16 finger finger NOUN NN Number=Sing _ _ _ _ 17 motifs motif NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 C2H2 C2h2 NOUN NN Number=Sing _ _ _ _ 21 type type NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 C- c- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 terminal terminal NOUN NN Number=Sing _ _ _ _ 26 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 29 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 Kruppel Kruppel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 like like ADP IN _ _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 conservation conservation NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 H/ h/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 C c NOUN NN Number=Sing _ _ _ _ 40 link link NOUN NN Number=Sing _ _ _ _ 41 sequence sequence NOUN NN Number=Sing _ _ _ _ 42 connecting connect VERB VBG VerbForm=Ger _ _ _ _ 43 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 9520 # text = The 160 N-terminal amino acids in the nonfinger region of clone 18 are highly homologous with similar regions of several other human, mouse, and Drosophila sequences, defining a subfamily of Kruppel-like zinc finger proteins termed TAB (tramtrack [ttk]-associated box) here. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 160 160 NUM CD NumType=Card _ _ _ _ 3 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 5 amino amino DET DT _ _ _ _ _ 6 acids acid NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 nonfinger nonfinger NOUN NN Number=Sing _ _ _ _ 10 region region NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 clone clone NOUN NN Number=Sing _ _ _ _ 13 18 18 NUM CD NumType=Card _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 highly highly ADV RB _ _ _ _ _ 16 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 similar similar ADJ JJ Degree=Pos _ _ _ _ 19 regions region NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 several several ADJ JJ Degree=Pos _ _ _ _ 22 other other ADJ JJ Degree=Pos _ _ _ _ 23 human human NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 mouse mouse NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 Drosophila Drosophila PROPN NNP Number=Sing _ _ _ _ 29 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 defining define VERB VBG VerbForm=Ger _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 subfamily subfamily NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 Kruppel Kruppel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 like like ADJ JJ Degree=Pos _ _ _ _ 38 zinc zinc NOUN NN Number=Sing _ _ _ _ 39 finger finger NOUN NN Number=Sing _ _ _ _ 40 proteins protein NOUN NNS Number=Plur _ _ _ _ 41 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 TAB Tab NOUN NN Number=Sing _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 tramtrack tramtrack NOUN NN Number=Sing _ _ _ _ 45 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 ttk ttk NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ _ 52 here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 9521 # text = One of the Drosophila sequences, ttk, is a developmental control gene, while a second does not contain a zinc finger region but encodes a structure important in oocyte development. 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 Drosophila Drosophila PROPN NNP Number=Sing _ _ _ _ 5 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 ttk ttk NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 12 control control NOUN NN Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 while while SCONJ IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 18 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 contain contain VERB VB VerbForm=Inf _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 zinc zinc NOUN NN Number=Sing _ _ _ _ 23 finger finger NOUN NN Number=Sing _ _ _ _ 24 region region NOUN NN Number=Sing _ _ _ _ 25 but but CCONJ CC _ _ _ _ _ 26 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 structure structure NOUN NN Number=Sing _ _ _ _ 29 important important ADJ JJ Degree=Pos _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 oocyte oocyte ADJ JJ Degree=Pos _ _ _ _ 32 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 9522 # text = An acidic activation domain is located between the N-terminal conserved region of clone 18 and its zinc fingers. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 acidic acidic ADJ JJ Degree=Pos _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 domain domain NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 between between ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 N- n- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 terminal terminal NOUN NN Number=Sing _ _ _ _ 11 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 region region NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 clone clone NOUN NN Number=Sing _ _ _ _ 15 18 18 NUM CD NumType=Card _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 zinc zinc NOUN NN Number=Sing _ _ _ _ 19 fingers finger NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 9523 # text = This protein appears to require both the S and J elements, which are separated by 10 bp for optimal binding. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 require require VERB VB VerbForm=Inf _ _ _ _ 6 both both CCONJ CC _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 S s NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 J j NOUN NN Number=Sing _ _ _ _ 11 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 separated separate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 10 10 NUM CD NumType=Card _ _ _ _ 18 bp bp NOUN NN Number=Sing _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 21 binding binding NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 9524 # text = Antisense cDNA to clone 18 inhibited the expression of a reporter construct containing the DPA promoter, indicating its functional importance in the expression of this class II gene. 1 Antisense Antisense ADJ JJ Degree=Pos _ _ _ _ 2 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 clone clone VERB VB VerbForm=Inf _ _ _ _ 5 18 18 NUM CD NumType=Card _ _ _ _ 6 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 reporter reporter NOUN NN Number=Sing _ _ _ _ 12 construct construct NOUN NN Number=Sing _ _ _ _ 13 containing contain VERB VBG VerbForm=Ger _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 DPA DPA PROPN NNP Number=Sing _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 19 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 functional functional ADJ JJ Degree=Pos _ _ _ _ 21 importance importance NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 27 class class NOUN NN Number=Sing _ _ _ _ 28 II ii NUM CD NumType=Card _ _ _ _ 29 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9525 # text = Document 0030011859 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011859 0030011859 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9526 # text = Alpha 4 beta 1 (CD49d/CD29) integrin costimulation of human T cells enhances transcription factor and cytokine induction in the absence of altered sensitivity to anti-CD3 stimulation. 1 Alpha Alpha PROPN NNP Number=Sing _ _ _ _ 2 4 4 NUM CD NumType=Card _ _ _ _ 3 beta beta NOUN NN Number=Sing _ _ _ _ 4 1 1 NUM CD NumType=Card _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 CD49d/CD29 Cd49d/cd29 NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 integrin integrin ADJ JJ Degree=Pos _ _ _ _ 9 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 enhances enhance NOUN NNS Number=Plur _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 19 induction induction NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 absence absence NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 altered alter VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 28 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9527 # text = The integrin alpha 4 beta 1 can provide a costimulus to induce IL-2 secretion and IL-2R expression leading to enhanced proliferation of purified, peripheral blood T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 integrin integrin NOUN NN Number=Sing _ _ _ _ 3 alpha alpha ADP IN _ _ _ _ _ 4 4 4 NUM CD NumType=Card _ _ _ _ 5 beta beta NOUN NN Number=Sing _ _ _ _ 6 1 1 NUM CD NumType=Card _ _ _ _ 7 can can AUX MD VerbForm=Fin _ _ _ _ 8 provide provide VERB VB VerbForm=Inf _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 costimulus costimulus NOUN NN Number=Sing _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 induce induce VERB VB VerbForm=Inf _ _ _ _ 13 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 secretion secretion NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2R 2r NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 leading lead VERB VBG VerbForm=Ger _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 enhanced enhance VERB VB VerbForm=Inf _ _ _ _ 25 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 purified purified ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 30 blood blood NOUN NN Number=Sing _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 9528 # text = Similar to expression of IL-2, we demonstrated that recombinant vascular-cell adhesion molecule-1, when co-immobilized with anti-CD3 mAb, significantly enhanced the induction of transcription factors NF-AT, AP-1, and NF-kappa 1 Similar similar ADJ JJ Degree=Pos _ _ _ _ 2 to to PART TO _ _ _ _ _ 3 expression expression VERB VB VerbForm=Inf _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 10 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 12 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 13 vascular vascular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 17 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 when when ADV WRB PronType=Int _ _ _ _ 21 co-immobilized co-immobilized ADJ JJ Degree=Pos _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 24 mAb mAb NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 significantly significantly ADV RB _ _ _ _ _ 27 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 induction induction NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ _ 32 factors factor NOUN NNS Number=Plur _ _ _ _ 33 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 AT at PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 AP ap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 kappa kappa PROPN NNP Number=Sing _ _ _ _ # sent_id = 9529 # text = B as determined by electromobility shift assays. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 as as SCONJ IN _ _ _ _ _ 3 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 electromobility electromobility NOUN NN Number=Sing _ _ _ _ 6 shift shift NOUN NN Number=Sing _ _ _ _ 7 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 9530 # text = alpha 4 beta 1 ligation alone had no effect on transcription factor binding. 1 alpha alpha ADP IN _ _ _ _ _ 2 4 4 NUM CD NumType=Card _ _ _ _ 3 beta beta NOUN NN Number=Sing _ _ _ _ 4 1 1 NUM CD NumType=Card _ _ _ _ 5 ligation ligation NOUN NN Number=Sing _ _ _ _ 6 alone alone ADV RB _ _ _ _ _ 7 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 no no DET DT _ _ _ _ _ 9 effect effect NOUN NN Number=Sing _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 9531 # text = The requirements for induction of transcription factors reflected the requirements for the secretion of multiple cytokines, including IL-2, TNF-alpha, IFN-gamma, and granulocyte macrophage-CSF. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 requirements requirement NOUN NNS Number=Plur _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 induction induction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factors factor NOUN NNS Number=Plur _ _ _ _ 8 reflected reflect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 requirements requirement NOUN NNS Number=Plur _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 secretion secretion NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 16 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 including include VERB VBG VerbForm=Ger _ _ _ _ 19 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 granulocyte granulocyte NOUN NN Number=Sing _ _ _ _ 33 macrophage macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 9532 # text = In contrast to freshly isolated T cells, in vitro-cultured T cells did not require costimulation for cytokine secretion in response to anti-CD3 alone. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 freshly freshly ADV RB _ _ _ _ _ 5 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 vitro vitro ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 cultured culture ADJ JJ Degree=Pos _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 require require VERB VB VerbForm=Inf _ _ _ _ 18 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 21 secretion secretion NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 26 alone alone ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 9533 # text = Comparison of the dose response to anti-CD3 stimulation demonstrated that half-maximal induction of IL-2 was achieved using the same dose of anti-CD3 for both freshly isolated and cultured T cells. 1 Comparison Comparison NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 dose dose DET DT Number=Plur|PronType=Dem _ _ _ _ 5 response response NOUN NN Number=Sing _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 8 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 9 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 11 half half NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 14 induction induction NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 achieved achieve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 using use VERB VBG VerbForm=Ger _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 same same ADJ JJ Degree=Pos _ _ _ _ 24 dose dose NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 anti-CD3 anti-CD3 NOUN NN Number=Sing _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 both both CCONJ CC _ _ _ _ _ 29 freshly freshly ADV RB _ _ _ _ _ 30 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 cultured culture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 T t PROPN NNP Number=Sing _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 9534 # text = Furthermore, the dose of OKT3 required to achieve half-maximal activation was the same using PMA or different concentrations of alpha 4 beta 1 ligands. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 dose dose NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 OKT3 OKT3 NUM CD NumType=Card _ _ _ _ 7 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 achieve achieve VERB VB VerbForm=Inf _ _ _ _ 10 half half NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 same same ADJ JJ Degree=Pos _ _ _ _ 17 using using VERB VBG VerbForm=Ger _ _ _ _ 18 PMA Pma PROPN NNP Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 different different ADJ JJ Degree=Pos _ _ _ _ 21 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 4 4 NUM CD NumType=Card _ _ _ _ 25 beta beta NOUN NN Number=Sing _ _ _ _ 26 1 1 NUM CD NumType=Card _ _ _ _ 27 ligands ligand NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 9535 # text = Therefore, costimulation by alpha 4 beta 1 ligands was not due to stabilization of the interaction of the cells with its substrate. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 alpha alpha ADV RB _ _ _ _ _ 6 4 4 NUM CD NumType=Card _ _ _ _ 7 beta beta NOUN NN Number=Sing _ _ _ _ 8 1 1 NUM CD NumType=Card _ _ _ _ 9 ligands ligand NOUN NNS Number=Plur _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 due due ADP IN _ _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 stabilization stabilization NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 interaction interaction NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 23 substrate substrate NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 9536 # text = We conclude, rather, that alpha 4 beta 1 in freshly isolated T cells delivers a distinct signal that synergizes early with signals initiated by TCR/CD3 ligation to induce DNA binding of multiple transcription factors required for cytokine gene induction. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 rather rather ADV RB _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 alpha alpha ADP IN _ _ _ _ _ 8 4 4 NUM CD NumType=Card _ _ _ _ 9 beta beta NOUN NN Number=Sing _ _ _ _ 10 1 1 NUM CD NumType=Card _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 freshly freshly ADV RB _ _ _ _ _ 13 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 delivers deliver VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 19 signal signal NOUN NN Number=Sing _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 synergizes synergize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 early early ADV RB Degree=Pos _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 signals signal NOUN NNS Number=Plur _ _ _ _ 25 initiated initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 TCR/ TCR/ SYM SYM _ _ _ _ SpaceAfter=No 28 CD3 CD3 NUM CD NumType=Card _ _ _ _ 29 ligation ligation NOUN NN Number=Sing _ _ _ _ 30 to to PART TO _ _ _ _ _ 31 induce induce VERB VB VerbForm=Inf _ _ _ _ 32 DNA dna NOUN NN Number=Sing _ _ _ _ 33 binding binding VERB VBG VerbForm=Ger _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 36 transcription transcription NOUN NN Number=Sing _ _ _ _ 37 factors factor NOUN NNS Number=Plur _ _ _ _ 38 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 for for ADP IN _ _ _ _ _ 40 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 41 gene gene NOUN NN Number=Sing _ _ _ _ 42 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9537 # text = Document 0030011865 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011865 0030011865 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9538 # text = Activation of nuclear factor-kappa B by beta-amyloid peptides and interferon-gamma in murine microglia. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 amyloid amyloid ADJ JJ Degree=Pos _ _ _ _ 12 peptides peptide NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 gamma gamma NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 murine murine ADJ JJ Degree=Pos _ _ _ _ 19 microglia microglia NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9539 # text = An increasing body of evidence suggests that amyloid-beta (A beta) peptides and microglia are crucially involved in the pathogenesis of Alzheimer's disease. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 3 body body NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 evidence evidence NOUN NN Number=Sing _ _ _ _ 6 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 amyloid amyloid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 beta beta NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 peptides peptide NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 microglia microglion NOUN NNS Number=Plur _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 crucially crucially ADV RB _ _ _ _ _ 20 involved involved ADJ JJ Degree=Pos _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 Alzheimer Alzheimer PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 's 's PART POS _ _ _ _ _ 27 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 9540 # text = In an effort to further elucidate the biological effects of A beta towards microglia, we investigated the ability of A beta peptides to activate nuclear factor (NF)-kappa B in the N9 murine microglial cell line. 1 In in ADP IN _ _ _ _ _ 2 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 effort effort NOUN NN Number=Sing _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 further further ADV RB _ _ _ _ _ 6 elucidate elucidate VERB VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 biological biological ADJ JJ Degree=Pos _ _ _ _ 9 effects effect NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 beta beta NOUN NN Number=Sing _ _ _ _ 13 towards towards ADP IN _ _ _ _ _ 14 microglia microglion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 17 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 ability ability NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 beta beta NOUN NN Number=Sing _ _ _ _ 23 peptides peptide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 activate activate VERB VB VerbForm=Inf _ _ _ _ 26 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappa kappa NOUN NN Number=Sing _ _ _ _ 33 B b NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 N9 N9 PROPN NNP Number=Sing _ _ _ _ 37 murine murine NOUN NN Number=Sing _ _ _ _ 38 microglial microglial ADJ JJ Degree=Pos _ _ _ _ 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 9541 # text = Co-stimulation of microglia with suboptimal concentrations of A beta(25-35) and 100 U/ml IFN gamma resulted in the detection of a specific NF-kappa B DNA-binding activity in nuclear extracts, as determined in gel mobility shift assays. 1 Co-stimulation Co-stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 microglia microglia NOUN NN Number=Sing _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 suboptimal suboptimal ADJ JJ Degree=Pos _ _ _ _ 6 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 25 25 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 -35 -35 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 100 100 NUM CD NumType=Card _ _ _ _ 16 U/ U/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ml ml NOUN NN Number=Sing _ _ _ _ 18 IFN Ifn PROPN NNP Number=Sing _ _ _ _ 19 gamma gamma PROPN NNP Number=Sing _ _ _ _ 20 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 detection detection NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 specific specific ADJ JJ Degree=Pos _ _ _ _ 27 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ _ 31 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 binding binding VERB VBG VerbForm=Ger _ _ _ _ 34 activity activity NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 37 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 as as SCONJ IN _ _ _ _ _ 40 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 gel gel NOUN NN Number=Sing _ _ _ _ 43 mobility mobility NOUN NN Number=Sing _ _ _ _ 44 shift shift NOUN NN Number=Sing _ _ _ _ 45 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 9542 # text = This response required at least 120 min to be evident and supershift experiments revealed that the NF-kappa B complex contains both RelA and p50. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 response response NOUN NN Number=Sing _ _ _ _ 3 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 at at ADV RB _ _ _ _ _ 5 least least ADV RBS Degree=Sup _ _ _ _ 6 120 120 NUM CD NumType=Card _ _ _ _ 7 min min NOUN NNS Number=Plur _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 evident evident ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 supershift supershift ADJ JJ Degree=Pos _ _ _ _ 13 experiments experiment NOUN NNS Number=Plur _ _ _ _ 14 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 complex complex NOUN NN Number=Sing _ _ _ _ 22 contains contain NOUN NNS Number=Plur _ _ _ _ 23 both both CCONJ CC _ _ _ _ _ 24 RelA Rela NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 9543 # text = Accordingly, immunoblot experiments showed that amongst NF-kappa B/Rel proteins, RelA and p50 are mobilized to the nucleus following microglial cell stimulation with A beta(25-35) plus IFN gamma. 1 Accordingly accordingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 immunoblot immunoblot ADJ JJ Degree=Pos _ _ _ _ 4 experiments experiment NOUN NNS Number=Plur _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 amongst amongst ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 Rel Rel NOUN NN Number=Sing _ _ _ _ 14 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 RelA Rela PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 p50 p50 NUM CD NumType=Card _ _ _ _ 19 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 mobilized mobilize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 24 following follow VERB VBG VerbForm=Ger _ _ _ _ 25 microglial microglial ADJ JJ Degree=Pos _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 25 25 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 - - SYM SYM _ _ _ _ SpaceAfter=No 34 35 35 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 plus plus CCONJ CC _ _ _ _ _ 37 IFN IFN PROPN NNP Number=Sing _ _ _ _ 38 gamma gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 9544 # text = Higher concentrations of A beta(25-35) were effective by themselves in inducing NF-kappa B activation, both in the N9 microglial cell line and in rat primary microglia, as well as in human monocytes. 1 Higher Higher DET DT _ _ _ _ _ 2 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 25 25 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - SYM SYM _ _ _ _ SpaceAfter=No 9 35 35 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 effective effective ADJ JJ Degree=Pos _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 themselves themselves PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs|Reflex=Yes _ _ _ _ 15 in in SCONJ IN _ _ _ _ _ 16 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa PROPN NNP Number=Sing _ _ _ _ 20 B b PROPN NNP Number=Sing _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 both both CCONJ CC _ _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 N9 N9 PROPN NNP Number=Sing _ _ _ _ 27 microglial microglial ADJ JJ Degree=Pos _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 line line NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 rat rat NOUN NN Number=Sing _ _ _ _ 33 primary primary ADJ JJ Degree=Pos _ _ _ _ 34 microglia microglia NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 as as ADV RB _ _ _ _ _ 37 well well ADV RB Degree=Pos _ _ _ _ 38 as as ADP IN _ _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 human human ADJ JJ Degree=Pos _ _ _ _ 41 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 9545 # text = For purposes of comparison, microglia were also stimulated with bacterial LPS, a known NF-kappa B inducer. 1 For for ADP IN _ _ _ _ _ 2 purposes purpose NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 comparison comparison NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 microglia microglia NOUN NN Number=Sing _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 also also ADV RB _ _ _ _ _ 9 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 12 LPS Lps NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B b PROPN NNP Number=Sing _ _ _ _ 20 inducer inducer NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 9546 # text = As expected, LPS strongly induced the formation of two NF-kappa B DNA-binding activities, one of which was identified as RelA/p50. 1 As as ADP IN _ _ _ _ _ 2 expected expect VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 LPS LPS PROPN NNP Number=Sing _ _ _ _ 5 strongly strongly ADV RB _ _ _ _ _ 6 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 formation formation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 two two NUM CD NumType=Card _ _ _ _ 11 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 binding binding VERB VBG VerbForm=Ger _ _ _ _ 18 activities activity NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 one one NUM CD NumType=Card _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 as as ADP IN _ _ _ _ _ 26 RelA RelA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 / / PUNCT , _ _ _ _ SpaceAfter=No 28 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 9547 # text = The LPS response was also more rapid, as it was already evident by 40 min and remained sustained for up to 3 h. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 LPS LPS PROPN NNP Number=Sing _ _ _ _ 3 response response NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 more more ADV RBR _ _ _ _ _ 7 rapid rapid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 as as SCONJ IN _ _ _ _ _ 10 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 already already ADV RB _ _ _ _ _ 13 evident evident ADJ JJ Degree=Pos _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 40 40 NUM CD NumType=Card _ _ _ _ 16 min min NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 sustained sustain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 up up NOUN NN Number=Sing _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 3 3 NUM CD NumType=Card _ _ _ _ 24 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 9548 # text = Collectively, these findings indicate that NF-kappa B activation might constitute one of the mechanisms underlying the inducible expression of kappa B-dependent genes in microglia stimulated by A beta peptides and IFN gamma, or by LPS. 1 Collectively collectively ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 findings finding NOUN NNS Number=Plur _ _ _ _ 5 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 might might AUX MD VerbForm=Fin _ _ _ _ 13 constitute constitute VERB VB VerbForm=Inf _ _ _ _ 14 one one NUM CD NumType=Card _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 18 underlying underly VERB VBG VerbForm=Ger _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 kappa kappa PROPN NNP Number=Sing _ _ _ _ 24 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 27 genes gene NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 microglia microglion NOUN NNS Number=Plur _ _ _ _ 30 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 beta beta NOUN NN Number=Sing _ _ _ _ 34 peptides peptide NOUN NNS Number=Plur _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 IFN Ifn PROPN NNP Number=Sing _ _ _ _ 37 gamma gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 or or CCONJ CC _ _ _ _ _ 40 by by ADP IN _ _ _ _ _ 41 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9549 # text = Document 0030011866 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011866 0030011866 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9550 # text = Multiple prolactin-responsive elements mediate G1 and S phase expression of the interferon regulatory factor-1 gene. 1 Multiple multiple ADJ JJ Degree=Pos _ _ _ _ 2 prolactin-responsive prolactin-responsive ADJ JJ Degree=Pos _ _ _ _ 3 elements element NOUN NNS Number=Plur _ _ _ _ 4 mediate mediate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 G1 G1 PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 S s PROPN NNP Number=Sing _ _ _ _ 8 phase phase NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 interferon interferon ADJ JJ Degree=Pos _ _ _ _ 13 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9551 # text = The interferon regulatory factor-1 (IRF-1) gene is both an immediate-early G1 phase gene and an S phase gene inducible by PRL in rat Nb2 T lymphocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 interferon interferon ADJ JJ Degree=Pos _ _ _ _ 3 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 -1 -1 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 IRF IRF NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 both both CCONJ CC _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 early early ADJ JJ Degree=Pos _ _ _ _ 18 G1 g1 NOUN NN Number=Sing _ _ _ _ 19 phase phase NOUN NN Number=Sing _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 S S ADJ JJ Degree=Pos _ _ _ _ 24 phase phase NOUN NN Number=Sing _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 PRL pRl PROPN NNP Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 rat rat NOUN NN Number=Sing _ _ _ _ 31 Nb2 Nb2 NUM CD NumType=Card _ _ _ _ 32 T t PROPN NNP Number=Sing _ _ _ _ 33 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 9552 # text = To understand the mechanism by which PRL regulates the biphasic expression of IRF-1, we cloned the rat IRF-1 gene and functionally characterized the IRF-1 promoter. 1 To to PART TO _ _ _ _ _ 2 understand understand VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 PRL PRL PROPN NNP Number=Sing _ _ _ _ 8 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 biphasic biphasic ADJ JJ Degree=Pos _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 18 cloned clon VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 rat rat NOUN NN Number=Sing _ _ _ _ 21 IRF Irf NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 functionally functionally ADV RB _ _ _ _ _ 27 characterized characterize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 9553 # text = Upon transfection into Nb2 T cells, 1.7 kilobases (kb) of IRF-1 5'-flanking DNA linked to a chloramphenicol acetyl transferase (CAT) reporter gene mediated a 30-fold induction of CAT enzyme activity in response to 24 h of PRL stimulation. 1 Upon upon ADP IN _ _ _ _ _ 2 transfection transfection NOUN NN Number=Sing _ _ _ _ 3 into into ADP IN _ _ _ _ _ 4 Nb2 Nb2 NUM CD NumType=Card _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 1.7 1.7 NUM CD NumType=Card _ _ _ _ 9 kilobases kilobase NOUN NNS Number=Plur _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 kb kb NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 flanking flanking VERB VBG VerbForm=Ger _ _ _ _ 21 DNA dna NOUN NN Number=Sing _ _ _ _ 22 linked link VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 26 acetyl acetyl NOUN NN Number=Sing _ _ _ _ 27 transferase transferase NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 CAT cat NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 reporter reporter NOUN NN Number=Sing _ _ _ _ 32 gene gene NOUN NN Number=Sing _ _ _ _ 33 mediated mediate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 30 30 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 fold fold NOUN NN Number=Sing _ _ _ _ 38 induction induction NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 CAT Cat NOUN NN Number=Sing _ _ _ _ 41 enzyme enzyme NOUN NN Number=Sing _ _ _ _ 42 activity activity NOUN NN Number=Sing _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 response response NOUN NN Number=Sing _ _ _ _ 45 to to ADP IN _ _ _ _ _ 46 24 24 NUM CD NumType=Card _ _ _ _ 47 h h NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 PRL Prl NOUN NN Number=Sing _ _ _ _ 50 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 9554 # text = Deletion mutants containing 1.3, 0.6, and 0.2 kb 1 Deletion Deletion NOUN NN Number=Sing _ _ _ _ 2 mutants mutant NOUN NNS Number=Plur _ _ _ _ 3 containing contain VERB VBG VerbForm=Ger _ _ _ _ 4 1.3 1.3 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 0.6 0.6 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 0.2 0.2 NUM CD NumType=Card _ _ _ _ 10 kb kb NOUN NN Number=Sing _ _ _ _ # sent_id = 9555 # text = 5'-flanking DNA were incrementally less transcriptionally active, although 0.2 kb still mediated a 12-fold induction by PRL. 1 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 ' ' NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 - - SYM SYM _ _ _ _ SpaceAfter=No 4 flanking flanking NOUN NN Number=Sing _ _ _ _ 5 DNA dna NOUN NN Number=Sing _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 incrementally incrementally ADV RB _ _ _ _ _ 8 less less ADV RBR Degree=Cmp _ _ _ _ 9 transcriptionally transcriptionally ADV RB _ _ _ _ _ 10 active active ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 although although SCONJ IN _ _ _ _ _ 13 0.2 0.2 NUM CD NumType=Card _ _ _ _ 14 kb kb NOUN NN Number=Sing _ _ _ _ 15 still still ADV RB _ _ _ _ _ 16 mediated mediate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 fold fold NOUN NN Number=Sing _ _ _ _ 21 induction induction NOUN NN Number=Sing _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 PRL PRL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 9556 # text = The sequence between -1.7 and -0.2 kb linked to a heterologous thymidine kinase promoter failed to respond to PRL stimulation, suggesting that the activity of upstream PRL response elements may require an interaction with promoter-proximal elements. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 sequence sequence NOUN NN Number=Sing _ _ _ _ 3 between between ADP IN _ _ _ _ _ 4 - - SYM SYM _ _ _ _ SpaceAfter=No 5 1.7 1.7 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 0.2 0.2 NUM CD NumType=Card _ _ _ _ 9 kb kb NOUN NN Number=Sing _ _ _ _ 10 linked link VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 14 thymidine thymidine NOUN NN Number=Sing _ _ _ _ 15 kinase kinase NOUN NN Number=Sing _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 respond respond VERB VB VerbForm=Inf _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 PRL PRL NOUN NN Number=Sing _ _ _ _ 22 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 30 PRL PRL NOUN NN Number=Sing _ _ _ _ 31 response response NOUN NN Number=Sing _ _ _ _ 32 elements element NOUN NNS Number=Plur _ _ _ _ 33 may may AUX MD VerbForm=Fin _ _ _ _ 34 require require VERB VB VerbForm=Inf _ _ _ _ 35 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 interaction interaction NOUN NN Number=Sing _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT , _ _ _ _ SpaceAfter=No 40 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 41 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 9557 # text = By assaying CAT enzyme activity across a 24-h PRL induction time course, we were able to assign G1 vs. 1 By by SCONJ IN _ _ _ _ _ 2 assaying assay VERB VBG VerbForm=Ger _ _ _ _ 3 CAT cat PROPN NNP Number=Sing _ _ _ _ 4 enzyme enzyme ADJ JJ Degree=Pos _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 across across ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 24 24 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 h h NOUN NN Number=Sing _ _ _ _ 11 PRL pRl NOUN NN Number=Sing _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 time time NOUN NN Number=Sing _ _ _ _ 14 course course NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 17 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 able able ADJ JJ Degree=Pos _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 assign assign VERB VB VerbForm=Inf _ _ _ _ 21 G1 G1 NUM CD NumType=Card _ _ _ _ 22 vs v NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 9558 # text = S phase PRL responses of the IRF-1 gene to different regions of the IRF-1 5'-flanking and promoter DNA. 1 S be NOUN NN Number=Sing _ _ _ _ 2 phase phase NOUN NN Number=Sing _ _ _ _ 3 PRL Prl NOUN NN Number=Sing _ _ _ _ 4 responses response NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 different different ADJ JJ Degree=Pos _ _ _ _ 13 regions region NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 flanking flanking VERB VBG VerbForm=Ger _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 promoter promoter VERB VB VerbForm=Inf _ _ _ _ 25 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 9559 # text = The 0.2-kb IRF-CAT construct was induced by PRL stimulation during the G1 phase of the cell cycle. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 0.2 0.2 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kb kb NOUN NN Number=Sing _ _ _ _ 5 IRF Irf NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 CAT Cat NOUN NN Number=Sing _ _ _ _ 8 construct construct NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 PRL Prl NOUN NN Number=Sing _ _ _ _ 13 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 14 during during ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 G1 G1 PROPN NNP Number=Sing _ _ _ _ 17 phase phase NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 9560 # text = In contrast, the 1.7-kb IRF-CAT construct was inducible by PRL during both G1 and S phase of the cell cycle. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 1.7 1.7 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kb kb NOUN NN Number=Sing _ _ _ _ 8 IRF Irf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 CAT Cat NOUN NN Number=Sing _ _ _ _ 11 construct construct NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 PRL pRl PROPN NNP Number=Sing _ _ _ _ 16 during during ADP IN _ _ _ _ _ 17 both both CCONJ CC _ _ _ _ _ 18 G1 G1 PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 S S PROPN NNP Number=Sing _ _ _ _ 21 phase phase NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 9561 # text = Hence, the PRL-induced biphasic expression of the IRF-1 gene appears to be controlled by separate PRL-responsive elements: elements in the first 0.2 kb of the IRF-1 promoter region act during early activation, and elements between 0.2 and 1.7 kb act in concert with the proximal 0.2-kb region during S phase progression. 1 Hence hence ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 PRL pRl NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 biphasic biphasic ADJ JJ Degree=Pos _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 separate separate ADJ JJ Degree=Pos _ _ _ _ 21 PRL Prl NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 24 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 : : PUNCT : _ _ _ _ _ 26 elements element NOUN NNS Number=Plur _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 30 0.2 0.2 NUM CD NumType=Card _ _ _ _ 31 kb kb NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ _ 37 promoter promoter NOUN NN Number=Sing _ _ _ _ 38 region region NOUN NN Number=Sing _ _ _ _ 39 act act NOUN NN Number=Sing _ _ _ _ 40 during during ADP IN _ _ _ _ _ 41 early early ADJ JJ Degree=Pos _ _ _ _ 42 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 elements element NOUN NNS Number=Plur _ _ _ _ 46 between between ADP IN _ _ _ _ _ 47 0.2 0.2 NUM CD NumType=Card _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 1.7 1.7 NUM CD NumType=Card _ _ _ _ 50 kb kb NOUN NN Number=Sing _ _ _ _ 51 act act NOUN NN Number=Sing _ _ _ _ 52 in in ADP IN _ _ _ _ _ 53 concert concert NOUN NN Number=Sing _ _ _ _ 54 with with ADP IN _ _ _ _ _ 55 the the DET DT Definite=Def|PronType=Art _ _ _ _ 56 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 57 0.2 0.2 NUM CD NumType=Card _ _ _ SpaceAfter=No 58 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 59 kb kb NOUN NN Number=Sing _ _ _ _ 60 region region NOUN NN Number=Sing _ _ _ _ 61 during during ADP IN _ _ _ _ _ 62 S s NOUN NN Number=Sing _ _ _ _ 63 phase phase NOUN NN Number=Sing _ _ _ _ 64 progression progression NOUN NN Number=Sing _ _ _ SpaceAfter=No 65 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9562 # text = Document 0030011874 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011874 0030011874 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9563 # text = Peripheral T lymphocytes from women with breast cancer exhibit abnormal protein expression of several signaling molecules. 1 Peripheral Peripheral PROPN NNP Number=Sing _ _ _ _ 2 T T PROPN NNP Number=Sing _ _ _ _ 3 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 women woman NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 breast breast NOUN NN Number=Sing _ _ _ _ 8 cancer cancer NOUN NN Number=Sing _ _ _ _ 9 exhibit exhibit NOUN NN Number=Sing _ _ _ _ 10 abnormal abnormal ADJ JJ Degree=Pos _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 several several ADJ JJ Degree=Pos _ _ _ _ 15 signaling signaling NOUN NN Number=Sing _ _ _ _ 16 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9564 # text = We examined signaling molecules of peripheral blood T lymphocytes obtained from women with breast cancer. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 signaling signale VERB VBG VerbForm=Ger _ _ _ _ 4 molecules molecule NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 7 blood blood NOUN NN Number=Sing _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 10 obtained obtain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 women woman NOUN NNS Number=Plur _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 breast breast NOUN NN Number=Sing _ _ _ _ 15 cancer cancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 9565 # text = In 6 of 14 patients, T lymphocytes displayed an impaired ability to translocate NFeB p65 (Rel-A) following activation by anti-CD3 and IL-2. 1 In in ADP IN _ _ _ _ _ 2 6 6 NUM CD NumType=Card _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 14 14 NUM CD NumType=Card _ _ _ _ 5 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 T T PROPN NNP Number=Sing _ _ _ _ 8 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 9 displayed display VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 impaired impaired ADJ JJ Degree=Pos _ _ _ _ 12 ability ability NOUN NN Number=Sing _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 translocate translocate VERB VB VerbForm=Inf _ _ _ _ 15 NFeB NFeB PROPN NNP Number=Sing _ _ _ _ 16 p65 p65 NUM CD NumType=Card _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 following follow VERB VBG VerbForm=Ger _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 9566 # text = This observation was made despite normal cytoplasmic levels of the Rel-A protein. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 observation observation NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 made make VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 despite despite ADP IN _ _ _ _ _ 6 normal normal ADJ JJ Degree=Pos _ _ _ _ 7 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 9567 # text = We also detected abnormally low levels of the signaling molecules T-cell receptor (TCR)-zeta, ZAP-70 and p56lck in 4 of 14 breast cancer patients, i.e., defects in T-cell signaling molecules. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 detected detect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 abnormally abnormally ADV RB _ _ _ _ _ 5 low low ADJ JJ Degree=Pos _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 signaling signaling NOUN NN Number=Sing _ _ _ _ 10 molecules molecule NOUN NNS Number=Plur _ _ _ _ 11 T- T- PUNCT : _ _ _ _ SpaceAfter=No 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 TCR TCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 - - PUNCT : _ _ _ _ SpaceAfter=No 18 zeta zeta NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 ZAP ZAP NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 70 70 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 p56lck p56lck NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 4 4 NUM CD NumType=Card _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 14 14 NUM CD NumType=Card _ _ _ _ 29 breast breast NOUN NN Number=Sing _ _ _ _ 30 cancer cancer NOUN NN Number=Sing _ _ _ _ 31 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 i.e. i.e. X FW _ _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 defects defects NOUN NNS Number=Plur _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 signaling signale VERB VBG VerbForm=Ger _ _ _ _ 40 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 9568 # text = T lymphocytes from 6 of the 14 patients also exhibited an increased expression of the dual specificity phosphatase, map kinase phosphatase-1 (MKP-1). 1 T t PROPN NNP Number=Sing _ _ _ _ 2 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 6 6 NUM CD NumType=Card _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 14 14 NUM CD NumType=Card _ _ _ _ 8 patients patient NOUN NNS Number=Plur _ _ _ _ 9 also also ADV RB _ _ _ _ _ 10 exhibited exhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 dual dual ADJ JJ Degree=Pos _ _ _ _ 17 specificity specificity NOUN NN Number=Sing _ _ _ _ 18 phosphatase phosphatase NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 map map NOUN NN Number=Sing _ _ _ _ 21 kinase kinase NOUN NN Number=Sing _ _ _ _ 22 phosphatase phosphatase NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 MKP Mkp NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 9569 # text = MKP-1 inactivates MAP kinase and therefore may interfere with the activation of c-jun and c-fos. 1 MKP Mkp SYM NFP _ _ _ _ SpaceAfter=No 2 - - SYM SYM _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 inactivates inactivate NOUN NNS Number=Plur _ _ _ _ 5 MAP map NOUN NN Number=Sing _ _ _ _ 6 kinase kinase NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 therefore therefore ADV RB _ _ _ _ _ 9 may may AUX MD VerbForm=Fin _ _ _ _ 10 interfere interfere VERB VB VerbForm=Inf _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 c- c- SYM NFP _ _ _ _ SpaceAfter=No 16 jun jun NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 c- c- SYM NFP _ _ _ _ SpaceAfter=No 19 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 9570 # text = Abnormalities of I or more signaling molecules were found in 9 of 14 patients; however, only 3 patients had T cells that exhibited all 5 defects. 1 Abnormalities Abnormality NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 4 or or CCONJ CC _ _ _ _ _ 5 more more ADJ JJR Degree=Cmp _ _ _ _ 6 signaling signaling NOUN NN Number=Sing _ _ _ _ 7 molecules molecule NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 9 9 NUM CD NumType=Card _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 14 14 NUM CD NumType=Card _ _ _ _ 14 patients patient NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ; ; PUNCT , _ _ _ _ _ 16 however however ADV RB _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 only only ADV RB _ _ _ _ _ 19 3 3 NUM CD NumType=Card _ _ _ _ 20 patients patient NOUN NNS Number=Plur _ _ _ _ 21 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 exhibited exhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 all all DET DT _ _ _ _ _ 27 5 5 NUM CD NumType=Card _ _ _ _ 28 defects defects NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 9571 # text = Our data have implications for the detection of potentially dysfunctional T cells in patients with cancer. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 implications implication NOUN NNS Number=Plur _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 detection detection NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 potentially potentially ADV RB _ _ _ _ _ 10 dysfunctional dysfunctional ADJ JJ Degree=Pos _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 patients patient NOUN NNS Number=Plur _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 cancer cancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 9572 # text = For example, the analysis of only 1 signaling molecule may allow patients with significant defects in T-cell signaling to go unnoticed. 1 For for ADP IN _ _ _ _ _ 2 example example NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 analysis analysis NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 only only ADV RB _ _ _ _ _ 8 1 1 NUM CD NumType=Card _ _ _ _ 9 signaling signaling NOUN NN Number=Sing _ _ _ _ 10 molecule molecule NOUN NN Number=Sing _ _ _ _ 11 may may AUX MD VerbForm=Fin _ _ _ _ 12 allow allow VERB VB VerbForm=Inf _ _ _ _ 13 patients patient NOUN NNS Number=Plur _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 significant significant ADJ JJ Degree=Pos _ _ _ _ 16 defects defects NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 signaling signale VERB VBG VerbForm=Ger _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 go go VERB VB VerbForm=Inf _ _ _ _ 23 unnoticed unnoticed ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 9573 # text = Finally, despite impaired Rel-A translocation, T cells were capable of transcribing IL-2. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 despite despite ADP IN _ _ _ _ _ 4 impaired impaire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 A a NOUN NN Number=Sing _ _ _ _ 8 translocation translocation NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 capable capable ADJ JJ Degree=Pos _ _ _ _ 14 of of SCONJ IN _ _ _ _ _ 15 transcribing transcribing VERB VBG VerbForm=Ger _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 9574 # text = Impairments in the translocation of Rel-B and c-Rel further suggest that the NFKB family members Rel-A, Rel-B and c-Rel are not required for the transcription of IL-2 in the peripheral T lymphocytes of patients with breast cancer. 1 Impairments Impairment NOUN NNS Number=Plur _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 translocation translocation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 B b PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 Rel Rel NOUN NN Number=Sing _ _ _ _ 13 further further ADV RB _ _ _ _ _ 14 suggest suggest VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 NFKB Nfkb ADJ JJ Degree=Pos _ _ _ _ 18 family family NOUN NN Number=Sing _ _ _ _ 19 members member NOUN NNS Number=Plur _ _ _ _ 20 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 -A -A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 -B -B PROPN NNP Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 c- c- SYM NFP _ _ _ _ SpaceAfter=No 27 Rel Rel NOUN NN Number=Sing _ _ _ _ 28 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 not not PART RB _ _ _ _ _ 30 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 2 2 NUM CD NumType=Card _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 41 T t PROPN NNP Number=Sing _ _ _ _ 42 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 patients patient NOUN NNS Number=Plur _ _ _ _ 45 with with ADP IN _ _ _ _ _ 46 breast breast NOUN NN Number=Sing _ _ _ _ 47 cancer cancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9575 # text = Document 0030011876 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011876 0030011876 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9576 # text = Potent inhibition of HIV type 1 replication by an antiinflammatory alkaloid, cepharanthine, in chronically infected monocytic cells. 1 Potent potent ADJ JJ Degree=Pos _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 HIV HIV PROPN NNP Number=Sing _ _ _ _ 5 type type NOUN NN Number=Sing _ _ _ _ 6 1 1 NUM CD NumType=Card _ _ _ _ 7 replication replication NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 antiinflammatory antiinflammatory ADJ JJ Degree=Pos _ _ _ _ 11 alkaloid alkaloid NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 cepharanthine cepharanthine NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 chronically chronically ADV RB _ _ _ _ _ 17 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9577 # text = Cepharanthine is a biscoclaurine alkaloid isolated from Stephania cepharantha Hayata and has been shown to have antiinflammatory, antiallergic, and immunomodulatory activities in vivo. 1 Cepharanthine Cepharanthine PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 biscoclaurine biscoclaurine NOUN NN Number=Sing _ _ _ _ 5 alkaloid alkaloid NOUN NN Number=Sing _ _ _ _ 6 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 Stephania Stephania PROPN NNP Number=Sing _ _ _ _ 9 cepharantha cepharantha PROPN NNP Number=Sing _ _ _ _ 10 Hayata Hayata PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 14 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 have have VERB VB VerbForm=Inf _ _ _ _ 17 antiinflammatory antiinflammatory ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 antiallergic antiallergic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 immunomodulatory immunomodulatory ADJ JJ Degree=Pos _ _ _ _ 23 activities activity NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 9578 # text = As several inflammatory cytokines and oxidative stresses are involved in the pathogenesis of HIV-1 infection, we investigated the inhibitory effects of cepharanthine on tumor necrosis factor alpha (TNF-alpha)- and phorbol 12-myristate 13-acetate (PMA)-induced HIV-1 replication in chronically infected cell lines. 1 As as ADP IN _ _ _ _ _ 2 several several ADJ JJ Degree=Pos _ _ _ _ 3 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 4 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 7 stresses stress NOUN NNS Number=Plur _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 involved involved ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 20 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 23 effects effect NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 cepharanthine cepharanthine NOUN NN Number=Sing _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 tumor tumor NOUN NN Number=Sing _ _ _ _ 28 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 29 factor factor NOUN NN Number=Sing _ _ _ _ 30 alpha alpha NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 - - PUNCT : _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 39 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 - - PUNCT : _ _ _ _ SpaceAfter=No 41 myristate myristate NOUN NN Number=Sing _ _ _ _ 42 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 - - PUNCT : _ _ _ _ SpaceAfter=No 44 acetate acetate NOUN NN Number=Sing _ _ _ _ 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 1 1 NUM CD NumType=Card _ _ _ _ 53 replication replication NOUN NN Number=Sing _ _ _ _ 54 in in ADP IN _ _ _ _ _ 55 chronically chronically ADV RB _ _ _ _ _ 56 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 57 cell cell NOUN NN Number=Sing _ _ _ _ 58 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 9579 # text = Two chronically HIV-1-infected cell lines, U1 (monocytic) and ACH-2 (T lymphocytic), were stimulated with TNF-alpha or PMA and cultured in the presence of various concentrations of the compound. 1 Two two NUM CD NumType=Card _ _ _ _ 2 chronically chronically NOUN NN Number=Sing _ _ _ _ 3 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 U1 U1 PROPN NNP Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 monocytic monocytic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 ACH ACh NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 T t NOUN NN Number=Sing _ _ _ _ 21 lymphocytic lymphocytic NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 alpha alpha PROPN NNP Number=Sing _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 PMA PMA PROPN NNP Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 cultured culture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 presence presence NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 various various ADJ JJ Degree=Pos _ _ _ _ 39 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 compound compound NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 9580 # text = HIV-1 replication was determined by p24 antigen level. 1 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 replication replication NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 p24 p24 NUM CD NumType=Card _ _ _ _ 9 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 10 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 9581 # text = The inhibitory effects of cepharanthine on HIV-1 long terminal repeat (LTR)-driven gene expression and nuclear factor kappaB (NF-kappaB) activation were also examined. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 3 effects effect NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 cepharanthine cepharanthine NOUN NN Number=Sing _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 long long ADJ JJ Degree=Pos _ _ _ _ 11 terminal terminal NOUN NN Number=Sing _ _ _ _ 12 repeat repeat NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 - - PUNCT : _ _ _ _ SpaceAfter=No 17 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ _ 30 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 also also ADV RB _ _ _ _ _ 32 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 9582 # text = Cepharanthine dose dependently inhibited HIV-1 replication in TNF-alpha- and PMA-stimulated U1 cells but not in ACH-2 cells. 1 Cepharanthine Cepharanthine VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 dose dose PRON DT Number=Plur|PronType=Dem _ _ _ _ 3 dependently dependently ADV RB _ _ _ _ _ 4 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 replication replication NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 PMA Pma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 U1 u1 NUM CD NumType=Card _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 ACH ACH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 9583 # text = Its 50% effective and cytotoxic concentrations were 0.016 and 2.2 microg/ml in PMA-stimulated U1 cells, respectively. 1 Its it PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 2 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 % % SYM NN Number=Sing _ _ _ _ 4 effective effective ADJ JJ Degree=Pos _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 cytotoxic cytotoxic ADJ JJ Degree=Pos _ _ _ _ 7 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 0.016 0.016 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 2.2 2.2 NUM CD NumType=Card _ _ _ _ 12 microg microg NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 / / PUNCT , _ _ _ _ SpaceAfter=No 14 ml ml NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 U1 u1 NUM CD NumType=Card _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 9584 # text = Cepharanthine was found to suppress HIV-1 LTR-driven gene expression through the inhibition of NF-kappaB activation. 1 Cepharanthine Cepharanthine PRON PRP _ _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 6 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 LTR- LTR- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 through through ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 9585 # text = These results indicate that cepharanthine is a highly potent inhibitor of HIV-1 replication in a chronically infected monocytic cell line. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 cepharanthine cepharanthine PRON PRP _ _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 highly highly ADV RB _ _ _ _ _ 9 potent potent ADJ JJ Degree=Pos _ _ _ _ 10 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 replication replication NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 chronically chronically ADV RB _ _ _ _ _ 19 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 9586 # text = Since biscoclaurine alkaloids, containing cepharanthine as a major component, are widely used for the treatment of patients with various inflammatory diseases in Japan, cepharanthine should be further pursued for its chemotherapeutic potential in HIV-1-infected patients. 1 Since since SCONJ IN _ _ _ _ _ 2 biscoclaurine biscoclaurine NOUN NN Number=Sing _ _ _ _ 3 alkaloids alkaloid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 containing contain VERB VBG VerbForm=Ger _ _ _ _ 6 cepharanthine cepharanthine NOUN NN Number=Sing _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 major major ADJ JJ Degree=Pos _ _ _ _ 10 component component NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 widely widely ADV RB _ _ _ _ _ 14 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 treatment treatment NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 patients patient NOUN NN Number=Sing _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 various various ADJ JJ Degree=Pos _ _ _ _ 22 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 23 diseases diseasis NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 Japan Japan PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 cepharanthine cepharanthine PRON PRP _ _ _ _ _ 28 should should AUX MD VerbForm=Fin _ _ _ _ 29 be be AUX VB VerbForm=Inf _ _ _ _ 30 further further ADV RB _ _ _ _ _ 31 pursued pursue VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 34 chemotherapeutic chemotherapeutic ADJ JJ Degree=Pos _ _ _ _ 35 potential potential NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9587 # text = Document 0030011877 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011877 0030011877 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9588 # text = Activation of Stat 5b in erythroid progenitors correlates with the ability of ErbB to induce sustained cell proliferation. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Stat Stat PROPN NNP Number=Sing _ _ _ _ 4 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 b b NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 8 progenitors progenitor NOUN NNS Number=Plur _ _ _ _ 9 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 ability ability NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 ErbB ErbB PROPN NNP Number=Sing _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 induce induce VERB VB VerbForm=Inf _ _ _ _ 17 sustained sustain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9589 # text = Self renewal of normal erythroid progenitors is induced by the receptor tyrosine kinase c-ErbB, whereas other receptors (c-Kit/Epo-R) regulate erythroid differentiation. 1 Self self NOUN NN Number=Sing _ _ _ _ 2 renewal renewal NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 normal normal ADJ JJ Degree=Pos _ _ _ _ 5 erythroid erythroid NOUN NN Number=Sing _ _ _ _ 6 progenitors progenitor NOUN NNS Number=Plur _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 13 kinase kinase NOUN NN Number=Sing _ _ _ _ 14 c- c- PUNCT , _ _ _ _ SpaceAfter=No 15 ErbB ErbB NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 whereas whereas SCONJ IN _ _ _ _ _ 18 other other ADJ JJ Degree=Pos _ _ _ _ 19 receptors receptor NOUN NNS Number=Plur _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 c- c- SYM NFP _ _ _ _ SpaceAfter=No 22 Kit Kit PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 / / PUNCT , _ _ _ _ SpaceAfter=No 24 Epo Epo PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 R R PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 30 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 9590 # text = To address possible mechanisms that could explain this selective activity of c-ErbB, we analyzed the ability of these receptors to activate the different members of the Stat transcription factor family. 1 To to PART TO _ _ _ _ _ 2 address address VERB VB VerbForm=Inf _ _ _ _ 3 possible possible ADJ JJ Degree=Pos _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 could could AUX MD VerbForm=Fin _ _ _ _ 7 explain explain VERB VB VerbForm=Inf _ _ _ _ 8 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 9 selective selective ADJ JJ Degree=Pos _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 c- c- SYM NFP _ _ _ _ SpaceAfter=No 13 ErbB ErbB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 16 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 ability ability NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 21 receptors receptor NOUN NNS Number=Plur _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 activate activate VERB VB VerbForm=Inf _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 different different ADJ JJ Degree=Pos _ _ _ _ 26 members member NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 Stat Stat PROPN NNP Number=Sing _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ _ 31 factor factor NOUN NN Number=Sing _ _ _ _ 32 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 9591 # text = Ligand activation of c-ErbB induced the tyrosine phosphorylation, DNA-binding, and reporter gene transcription of Stat 5b in erythroblasts. 1 Ligand Ligand NOUN NN Number=Sing _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 ErbB ErbB PROPN NNP Number=Sing _ _ _ _ 7 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 10 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 reporter reporter NOUN NN Number=Sing _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 Stat Stat PROPN NNP Number=Sing _ _ _ _ 22 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 b b NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 erythroblasts erythroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 9592 # text = In contrast, ligand activation of c-Kit was unable to induce any of these effects in the same cells. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 ligand ligand NUM CD NumType=Card _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Kit Kit NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 unable unable ADJ JJ Degree=Pos _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 induce induce VERB VB VerbForm=Inf _ _ _ _ 14 any any DET DT _ _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 17 effects effect NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 same same ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 9593 # text = Activation of the erythropoietin receptor caused specific DNA-binding of Stat 5b, but failed to induce reporter gene transcription. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 erythropoietin erythropoietin ADJ JJ Degree=Pos _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ _ 6 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 binding binding VERB VBG VerbForm=Ger _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 Stat Stat PROPN NNP Number=Sing _ _ _ _ 13 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 b b NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 induce induce VERB VB VerbForm=Inf _ _ _ _ 20 reporter reporter NOUN NN Number=Sing _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 9594 # text = These biochemical findings correlate perfectly with the selective ability of c-ErbB to cause sustained self renewal in erythroid progenitors. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 3 findings finding NOUN NNS Number=Plur _ _ _ _ 4 correlate correlate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 perfectly perfectly ADV RB _ _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 selective selective ADJ JJ Degree=Pos _ _ _ _ 9 ability ability NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 c- c- SYM NFP _ _ _ _ SpaceAfter=No 12 ErbB ErbB PROPN NNP Number=Sing _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 cause cause VERB VB VerbForm=Inf _ _ _ _ 15 sustained sustain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 self self NOUN NN Number=Sing _ _ _ _ 17 renewal renewal NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 20 progenitors progenitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9595 # text = Document 0030011879 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011879 0030011879 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9596 # text = Identification of human TR2 orphan receptor response element in the transcriptional initiation site of the simian virus 40 major late promoter [published erratum appears in J Biol Chem 1995 Nov 3;270(44):26721] 1 Identification identification NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 TR2 Tr2 NUM CD NumType=Card _ _ _ _ 5 orphan orphan ADJ JJ Degree=Pos _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 response response NOUN NN Number=Sing _ _ _ _ 8 element element NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 initiation initiation NOUN NN Number=Sing _ _ _ _ 13 site site NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 simian simian ADJ JJ Degree=Pos _ _ _ _ 17 virus virus NOUN NN Number=Sing _ _ _ _ 18 40 40 NUM CD NumType=Card _ _ _ _ 19 major major ADJ JJ Degree=Pos _ _ _ _ 20 late late ADJ JJ Degree=Pos _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 published publish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 erratum erratum NOUN NN Number=Sing _ _ _ _ 25 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 J j PROPN NNP Number=Sing _ _ _ _ 28 Biol Biol PROPN NNP Number=Sing _ _ _ _ 29 Chem Chem PROPN NNP Number=Sing _ _ _ _ 30 1995 1995 NUM CD NumType=Card _ _ _ _ 31 Nov Nov PROPN NNP Number=Sing _ _ _ _ 32 3;270 3;270 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 44) 44) SYM NFP _ _ _ _ SpaceAfter=No 35 :26721 :26721 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 9597 # text = A DNA response element (TR2RE-SV40) for the TR2 orphan receptor, a member of the steroid-thyroid hormone receptor superfamily, has been identified in the simian virus 40 (SV40) +55 region (nucleotide numbers 368-389, 5'-GTTAAGGTTCGTAGGTCATGGA-3'). 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ _ 3 response response NOUN NN Number=Sing _ _ _ _ 4 element element NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 TR2RE Tr2re NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 SV40 SV40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 TR2 Tr2 NUM CD NumType=Card _ _ _ _ 13 orphan orphan ADJ JJ Degree=Pos _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 member member NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 steroid steroid NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 thyroid thyroid NOUN NN Number=Sing _ _ _ _ 23 hormone hormone NOUN NN Number=Sing _ _ _ _ 24 receptor receptor NOUN NN Number=Sing _ _ _ _ 25 superfamily superfamily ADV RB _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 29 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 simian simian ADJ JJ Degree=Pos _ _ _ _ 33 virus virus NOUN NN Number=Sing _ _ _ _ 34 40 40 NUM CD NumType=Card _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 SV40 SV40 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 +55 +55 NUM CD NumType=Card _ _ _ _ 39 region region NOUN NN Number=Sing _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 nucleotide nucleotide NOUN NN Number=Sing _ _ _ _ 42 numbers number NOUN NNS Number=Plur _ _ _ _ 43 368-389 368-389 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 46 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 47 -GTTAAGGTTCGTAGGTCATGGA -GTTAAGGTTCGTAGGTCATGGa NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 9598 # text = Electrophoretic mobility shift assay, using in vitro translated TR2 orphan receptor with a molecular mass of 67 kilodaltons, showed a specific binding with high affinity (dissociation constant = 9 nM) for this DNA sequence. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 using use VERB VBG VerbForm=Ger _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 vitro vitro PROPN NNP Number=Sing _ _ _ _ 9 translated translate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 TR2 TR2 NUM CD NumType=Card _ _ _ _ 11 orphan orphan ADJ JJ Degree=Pos _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 16 mass mass NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 67 67 NUM CD NumType=Card _ _ _ _ 19 kilodaltons kilodalton NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 specific specific ADJ JJ Degree=Pos _ _ _ _ 24 binding binding NOUN NN Number=Sing _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 high high ADJ JJ Degree=Pos _ _ _ _ 27 affinity affinity NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 dissociation dissociation NOUN NN Number=Sing _ _ _ _ 30 constant constant NOUN NN Number=Sing _ _ _ _ 31 = = SYM SYM _ _ _ _ _ 32 9 9 NUM CD NumType=Card _ _ _ _ 33 nM nm NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 37 DNA dna NOUN NN Number=Sing _ _ _ _ 38 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 9599 # text = DNA-swap experiments using chloramphenicol acetyl-transferase assay demonstrated that androgen can suppress the transcriptional activities of SV40 early promoter via the interaction between this TR2RE-SV40 and the chimeric receptor AR/TR2/AR with the DNA-binding domain of the TR2 orphan receptor flanked by the N-terminal and androgen-binding domains of the androgen receptor. 1 DNA- DNA- SYM NFP _ _ _ _ SpaceAfter=No 2 swap swap NOUN NN Number=Sing _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ _ 4 using use VERB VBG VerbForm=Ger _ _ _ _ 5 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 6 acetyl acetyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 transferase transferase NOUN NN Number=Sing _ _ _ _ 9 assay assay NOUN NN Number=Sing _ _ _ _ 10 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 12 androgen androgen NOUN NN Number=Sing _ _ _ _ 13 can can AUX MD VerbForm=Fin _ _ _ _ 14 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 17 activities activity NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 SV40 SV40 NUM CD NumType=Card _ _ _ _ 20 early early ADJ JJ Degree=Pos _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 via via ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 interaction interaction NOUN NN Number=Sing _ _ _ _ 25 between between ADP IN _ _ _ _ _ 26 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 27 TR2RE Tr2re NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 SV40 SV40 NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 chimeric chimeric ADJ JJ Degree=Pos _ _ _ _ 33 receptor receptor NOUN NN Number=Sing _ _ _ _ 34 AR/TR2/ AR/TR2/ PUNCT HYPH _ _ _ _ SpaceAfter=No 35 AR be NOUN NN Number=Sing _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 binding bind VERB VBG VerbForm=Ger _ _ _ _ 41 domain domain NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 TR2 Tr2 NUM CD NumType=Card _ _ _ _ 45 orphan orphan ADJ JJ Degree=Pos _ _ _ _ 46 receptor receptor NOUN NN Number=Sing _ _ _ _ 47 flanked flank VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 48 by by ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 N- n- NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 terminal terminal NOUN NN Number=Sing _ _ _ _ 52 and and CCONJ CC _ _ _ _ _ 53 androgen androgen NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 -binding -binding VERB VBG VerbForm=Ger _ _ _ _ 55 domains domain NOUN NNS Number=Plur _ _ _ _ 56 of of ADP IN _ _ _ _ _ 57 the the DET DT Definite=Def|PronType=Art _ _ _ _ 58 androgen androgen ADJ JJ Degree=Pos _ _ _ _ 59 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 9600 # text = In addition, this TR2RE-SV40 can function as a repressor to suppress the transcriptional activities of both SV40 early and late promoters. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 TR2RE Tr2re NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 SV40 SV40 NOUN NN Number=Sing _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 function function VERB VB VerbForm=Inf _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 repressor repressor NOUN NN Number=Sing _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 17 activities activity NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 both both DET DT _ _ _ _ _ 20 SV40 SV40 NOUN NN Number=Sing _ _ _ _ 21 early early ADJ JJ Degree=Pos _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 late late ADJ JJ Degree=Pos _ _ _ _ 24 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 9601 # text = Together, these data suggest the TR2RE-SV40 may represent the first identified natural DNA response element for the TR2 orphan receptor that may function as a repressor for the SV40 gene expression. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 data data NOUN NN Number=Sing _ _ _ _ 5 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 TR2RE Tr2re NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 SV40 SV40 NOUN NN Number=Sing _ _ _ _ 10 may may AUX MD VerbForm=Fin _ _ _ _ 11 represent represent VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 first first ADV RBS _ _ _ _ _ 14 identified identify ADJ JJ Degree=Pos _ _ _ _ 15 natural natural ADJ JJ Degree=Pos _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ _ 17 response response NOUN NN Number=Sing _ _ _ _ 18 element element NOUN NN Number=Sing _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 TR2 Tr2 NUM CD NumType=Card _ _ _ _ 22 orphan orphan ADJ JJ Degree=Pos _ _ _ _ 23 receptor receptor NOUN NN Number=Sing _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 may may AUX MD VerbForm=Fin _ _ _ _ 26 function function VERB VB VerbForm=Inf _ _ _ _ 27 as as ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 repressor repressor NOUN NN Number=Sing _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 SV40 SV40 PROPN NNP Number=Sing _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9602 # text = Document 0030011880 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011880 0030011880 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9603 # text = T cell priming enhances IL-4 gene expression by increasing nuclear factor of activated T cells. 1 T t NOUN NN Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 priming priming VERB VBG VerbForm=Ger _ _ _ _ 4 enhances enhance NOUN NNS Number=Plur _ _ _ _ 5 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 4 4 NUM CD NumType=Card _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 by by SCONJ IN _ _ _ _ _ 11 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9604 # text = The repetitive activation of T cells (priming) enhances the expression of many cytokines, such as IL-4, but not others, such as IL-2. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 repetitive repetitive ADJ JJ Degree=Pos _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 priming priming NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 enhances enhance VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 many many ADJ JJ Degree=Pos _ _ _ _ 15 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 such such ADJ JJ Degree=Pos _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 but but CCONJ CC _ _ _ _ _ 24 not not ADV RB _ _ _ _ _ 25 others other NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 such such ADJ JJ Degree=Pos _ _ _ _ 28 as as ADP IN _ _ _ _ _ 29 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 9605 # text = Molecular mechanisms underlying selective expression of cytokines by T cells remain poorly understood. 1 Molecular Molecular ADJ JJ Degree=Pos _ _ _ _ 2 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 3 underlying underly VERB VBG VerbForm=Ger _ _ _ _ 4 selective selective ADJ JJ Degree=Pos _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 T T PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 remain remain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 poorly poorly ADJ JJ Degree=Pos _ _ _ _ 13 understood understand NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 9606 # text = Here we show that priming of CD4 T cells selectively enhances IL-4 expression relative to IL-2 expression by a transcriptional mechanism involving nuclear factor of activated T cells (NFAT) proteins. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 priming priming VERB VBG VerbForm=Ger _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 selectively selectively ADV RB _ _ _ _ _ 11 enhances enhance NOUN NNS Number=Plur _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 4 4 NUM CD NumType=Card _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 relative relative ADV RB _ _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 25 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 26 involving involve VERB VBG VerbForm=Ger _ _ _ _ 27 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 28 factor factor NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 9607 # text = As detected by in vivo footprinting, priming markedly increases the activation-dependent engagement of the P0 and P1 NFAT-binding elements of the IL-4 promoter. 1 As as SCONJ IN _ _ _ _ _ 2 detected detect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 vivo vivo NOUN NN Number=Sing _ _ _ _ 6 footprinting footprinting NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 priming prim VERB VBG VerbForm=Ger _ _ _ _ 9 markedly markedly ADV RB _ _ _ _ _ 10 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 engagement engagement NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 P0 P0 PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 P1 P1 PROPN NNP Number=Sing _ _ _ _ 21 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 binding bind VERB VBG VerbForm=Ger _ _ _ _ 24 elements element NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 4 4 NUM CD NumType=Card _ _ _ _ 30 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 9608 # text = Moreover, each proximal P element is essential for optimal IL-4 promoter activity. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 each each DET DT _ _ _ _ _ 4 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 5 P p NOUN NN Number=Sing _ _ _ _ 6 element element NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 essential essential ADJ JJ Degree=Pos _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 11 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 4 4 NUM CD NumType=Card _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 9609 # text = Activated primed CD4 T cells contain more NFAT1 and support greater NFAT-directed transcription than unprimed CD4 T cells, while activator protein 1 binding and activator protein 1-mediated transcription by both cell types is similar. 1 Activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 primed prim VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 more more ADJ JJR Degree=Cmp _ _ _ _ 8 NFAT1 nfat1 NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 support support VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 greater greater ADJ JJR Degree=Cmp _ _ _ _ 12 NFAT Nfat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 than than ADP IN _ _ _ _ _ 17 unprimed unprim ADJ JJ Degree=Pos _ _ _ _ 18 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 while while SCONJ IN _ _ _ _ _ 23 activator activator NOUN NN Number=Sing _ _ _ _ 24 protein protein NOUN NN Number=Sing _ _ _ _ 25 1 1 NUM CD NumType=Card _ _ _ _ 26 binding binding NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 activator activator NOUN NN Number=Sing _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ _ 30 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 both both DET DT _ _ _ _ _ 36 cell cell NOUN NN Number=Sing _ _ _ _ 37 types type NOUN NNS Number=Plur _ _ _ _ 38 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 similar similar ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 9610 # text = Increased expression of wild-type NFAT1 substantially increases IL-4 promoter activity in unprimed CD4 T cells, suggesting NFAT1 may be limiting for IL-4 gene expression in this cell type. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 type type NOUN NN Number=Sing _ _ _ _ 7 NFAT1 nfat1 PROPN NNP Number=Sing _ _ _ _ 8 substantially substantially ADV RB _ _ _ _ _ 9 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 4 4 NUM CD NumType=Card _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 unprimed unprim ADJ JJ Degree=Pos _ _ _ _ 17 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 suggesting suggesting VERB VBG VerbForm=Ger _ _ _ _ 22 NFAT1 nfat1 PROPN NNP Number=Sing _ _ _ _ 23 may may AUX MD VerbForm=Fin _ _ _ _ 24 be be AUX VB VerbForm=Inf _ _ _ _ 25 limiting limit VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 4 4 NUM CD NumType=Card _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ _ 31 expression expression NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 9611 # text = Furthermore, a truncated form of NFAT1 acts as a dominant-negative, reducing IL-4 promoter activity in primed CD4 T cells and confirming the importance of endogenous NFAT to increased IL-4 gene expression by effector T cells. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 truncated truncated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 form form NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NFAT1 NFAT1 PROPN NNP Number=Sing _ _ _ _ 8 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 dominant dominant NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 negative negative NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 reducing reduce VERB VBG VerbForm=Ger _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 4 4 NUM CD NumType=Card _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 primed prim ADJ JJ Degree=Pos _ _ _ _ 23 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 24 T T PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 confirming confirm VERB VBG VerbForm=Ger _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 importance importance NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 32 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 4 4 NUM CD NumType=Card _ _ _ _ 38 gene gene NOUN NN Number=Sing _ _ _ _ 39 expression expression NOUN NN Number=Sing _ _ _ _ 40 by by ADP IN _ _ _ _ _ 41 effector effector NOUN NN Number=Sing _ _ _ _ 42 T t PROPN NNP Number=Sing _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 9612 # text = NFAT1 appears to be the major NFAT family member responsible for the initial increased expression of IL-4 by primed CD4 T cells. 1 NFAT1 nfat1 NOUN NN Number=Sing _ _ _ _ 2 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 be be AUX VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 major major ADJ JJ Degree=Pos _ _ _ _ 7 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 8 family family NOUN NN Number=Sing _ _ _ _ 9 member member NOUN NN Number=Sing _ _ _ _ 10 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 initial initial ADJ JJ Degree=Pos _ _ _ _ 14 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 4 4 NUM CD NumType=Card _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 primed prim VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 CD4 Cd4 PROPN NNP Number=Sing _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9613 # text = Document 0030011881 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011881 0030011881 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9614 # text = Host defense mechanisms triggered by microbial lipoproteins through toll-like receptors. 1 Host host ADJ JJ Degree=Pos _ _ _ _ 2 defense defense NOUN NN Number=Sing _ _ _ _ 3 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 4 triggered trigger VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 microbial microbial ADJ JJ Degree=Pos _ _ _ _ 7 lipoproteins lipoprotein NOUN NNS Number=Plur _ _ _ _ 8 through through ADP IN _ _ _ _ _ 9 toll toll NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 like like ADJ JJ Degree=Pos _ _ _ _ 12 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9615 # text = The generation of cell-mediated immunity against many infectious pathogens involves the production of interleukin-12 (IL-12), a key signal of the innate immune system. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 generation generation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 immunity immunity NOUN NN Number=Sing _ _ _ _ 8 against against ADP IN _ _ _ _ _ 9 many many ADJ JJ Degree=Pos _ _ _ _ 10 infectious infectious ADJ JJ Degree=Pos _ _ _ _ 11 pathogens pathogen NOUN NNS Number=Plur _ _ _ _ 12 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 production production NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 -12 -12 NUM CD NumType=Card _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 key key ADJ JJ Degree=Pos _ _ _ _ 26 signal signal NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 innate innate ADJ JJ Degree=Pos _ _ _ _ 30 immune immune ADJ JJ Degree=Pos _ _ _ _ 31 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 9616 # text = Yet, for many pathogens, the molecules that induce IL-12 production by macrophages and the mechanisms by which they do so remain undefined. 1 Yet yet CCONJ CC _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 many many ADJ JJ Degree=Pos _ _ _ _ 5 pathogens pathogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 molecules molecule NOUN NNS Number=Plur _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 induce induce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 12 12 NUM CD NumType=Card _ _ _ _ 14 production production NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 23 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 so so ADV RB _ _ _ _ _ 25 remain remain VERB VB VerbForm=Inf _ _ _ _ 26 undefined undefin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 9617 # text = Here it is shown that microbial lipoproteins are potent stimulators of IL-12 production by human macrophages, and that induction is mediated by Toll-like receptors (TLRs). 1 Here here ADV RB PronType=Dem _ _ _ _ 2 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 microbial microbial ADJ JJ Degree=Pos _ _ _ _ 7 lipoproteins lipoprotein NOUN NNS Number=Plur _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 potent potent ADJ JJ Degree=Pos _ _ _ _ 10 stimulators stimulator NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 12 12 NUM CD NumType=Card _ _ _ _ 15 production production NOUN NN Number=Sing _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 induction induction NOUN NN Number=Sing _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 Toll toll PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 like like ADP IN _ _ _ _ _ 29 receptors receptor NOUN NNS Number=Plur _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 TLRs TLRs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 9618 # text = Several lipoproteins stimulated TLR-dependent transcription of inducible nitric oxide synthase and the production of nitric oxide, a powerful microbicidal pathway. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 lipoproteins lipoprotein NOUN NNS Number=Plur _ _ _ _ 3 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 TLR Tlr ADV RB _ _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 10 nitric nitric ADJ JJ Degree=Pos _ _ _ _ 11 oxide oxide NOUN NN Number=Sing _ _ _ _ 12 synthase synthase NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 production production NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 nitric nitric ADJ JJ Degree=Pos _ _ _ _ 18 oxide oxide NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 powerful powerful ADJ JJ Degree=Pos _ _ _ _ 22 microbicidal microbicidal ADJ JJ Degree=Pos _ _ _ _ 23 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 9619 # text = Activation of TLRs by microbial lipoproteins may initiate innate defense mechanisms against infectious pathogens. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 TLRs TLR NOUN NNS Number=Plur _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 microbial microbial ADJ JJ Degree=Pos _ _ _ _ 6 lipoproteins lipoprotein NOUN NNS Number=Plur _ _ _ _ 7 may may AUX MD VerbForm=Fin _ _ _ _ 8 initiate initiate VERB VB VerbForm=Inf _ _ _ _ 9 innate innate ADJ JJ Degree=Pos _ _ _ _ 10 defense defense NOUN NN Number=Sing _ _ _ _ 11 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 12 against against ADP IN _ _ _ _ _ 13 infectious infectious ADJ JJ Degree=Pos _ _ _ _ 14 pathogens pathogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9620 # text = Document 0030011883 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011883 0030011883 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9621 # text = Interleukin (IL)-10 inhibits nuclear factor kappa B (NF kappa B) activation in human monocytes. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 10 10 NUM CD NumType=Card _ _ _ _ 7 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B B PROPN NNP Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 NF NF PROPN NNP Number=Sing _ _ _ _ 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B B NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 9622 # text = IL-10 and IL-4 suppress cytokine synthesis by different mechanisms. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 4 4 NUM CD NumType=Card _ _ _ _ 8 suppress suppress NOUN NN Number=Sing _ _ _ _ 9 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 10 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 different different ADJ JJ Degree=Pos _ _ _ _ 13 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9623 # text = Our previous studies in human monocytes have demonstrated that interleukin (IL)-10 inhibits lipopolysaccharide (LPS)-stimulated production of inflammatory cytokines, IL-1 beta, IL-6, IL-8, and tumor necrosis factor (TNF)-alpha by blocking gene transcription. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 previous previous ADJ JJ Degree=Pos _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 10 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 - - SYM SYM _ _ _ _ SpaceAfter=No 15 10 10 NUM CD NumType=Card _ _ _ _ 16 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 17 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 production production NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 26 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 tumor tumor NOUN NN Number=Sing _ _ _ _ 43 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 44 factor factor NOUN NN Number=Sing _ _ _ _ 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 48 - - PUNCT , _ _ _ _ SpaceAfter=No 49 alpha alpha ADV RB _ _ _ _ _ 50 by by SCONJ IN _ _ _ _ _ 51 blocking blocke VERB VBG VerbForm=Ger _ _ _ _ 52 gene gene ADJ JJ Degree=Pos _ _ _ _ 53 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 9624 # text = Using electrophoretic mobility shift assays (EMSA), we now show that, in monocytes stimulated with LPS or TNF alpha, IL-10 inhibits nuclear stimulation of nuclear factor kappa B (NF kappa 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 3 mobility mobility NOUN NN Number=Sing _ _ _ _ 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assays assays NOUN NNS Number=Plur _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 EMSA EMSA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 now now ADV RB _ _ _ _ _ 12 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 17 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 LPS LPS PROPN NNP Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 TNF TNF PROPN NNP Number=Sing _ _ _ _ 22 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 10 10 NUM CD NumType=Card _ _ _ _ 27 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 28 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 29 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 32 factor factor NOUN NN Number=Sing _ _ _ _ 33 kappa kappa NOUN NN Number=Sing _ _ _ _ 34 B b PROPN NNP Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 NF NF PROPN NNP Number=Sing _ _ _ _ 37 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 9625 # text = B), a transcription factor involved in the expression of inflammatory cytokine genes. 1 B b X LS _ _ _ _ SpaceAfter=No 2 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 13 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 14 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 9626 # text = Several other transcription factors including NF-IL-6, AP-1, AP-2, GR, CREB, Oct-1, and Sp-1 are not affected by IL-10. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 other other ADJ JJ Degree=Pos _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factors factor NOUN NNS Number=Plur _ _ _ _ 5 including include VERB VBG VerbForm=Ger _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 GR GR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 Sp sp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 -1 -1 NUM CD NumType=Card _ _ _ _ 30 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 not not PART RB _ _ _ _ _ 32 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 9627 # text = This selective inhibition by IL-10 of NF kappa B activation occurs rapidly and in a dose-dependent manner and correlates well with IL-10's cytokine synthesis inhibitory activity in terms of both kinetics and dose responsiveness. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 selective selective ADJ JJ Degree=Pos _ _ _ _ 3 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 10 10 NUM CD NumType=Card _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ _ 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B B ADJ JJ Degree=Pos _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 occurs occur NOUN NNS Number=Plur _ _ _ _ 14 rapidly rapidly ADV RB _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 21 manner manner NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 well well ADV RB Degree=Pos _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 10's 10' NOUN NNS Number=Plur _ _ _ _ 29 cytokine cytokine PRON PRP _ _ _ _ _ 30 synthesis synthesis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 32 activity activity NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 terms term NOUN NNS Number=Plur _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 both both DET DT _ _ _ _ _ 37 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 dose dose DET DT Number=Plur|PronType=Dem _ _ _ _ 40 responsiveness responsiveness NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 9628 # text = Furthermore, compounds such as tosylphenylalanyl chloromethyl ketone and pyrrolidinedithiocarbamate that are known to selectively inhibit NF kappa B activation block cytokine gene transcription in LPS-stimulated monocytes. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 compounds compound NOUN NNS Number=Plur _ _ _ _ 4 such such ADJ JJ Degree=Pos _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 tosylphenylalanyl tosylphenylalanyl ADJ JJ Degree=Pos _ _ _ _ 7 chloromethyl chloromethyl NOUN NN Number=Sing _ _ _ _ 8 ketone ketone NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 pyrrolidinedithiocarbamate pyrrolidinedithiocarbamate NOUN NN Number=Sing _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 known known VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 selectively selectively ADV RB _ _ _ _ _ 16 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ _ 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B b PROPN NNP Number=Sing _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 block block NOUN NN Number=Sing _ _ _ _ 22 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 9629 # text = Taken together, these results suggest that inhibition of NF kappa B activation may be an important mechanism for IL-10 suppression of cytokine gene transcription in human monocytes. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF Nf PROPN NNP Number=Sing _ _ _ _ 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 important important ADJ JJ Degree=Pos _ _ _ _ 18 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 10 10 NUM CD NumType=Card _ _ _ _ 23 suppression suppression NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 26 gene gene NOUN NN Number=Sing _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 9630 # text = IL-4, another cytokine that inhibits cytokine mRNA accumulation in monocytes, shows little inhibitory effect on LPS-induced NF kappa B activation. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 another another DET DT _ _ _ _ _ 6 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 cytokine cytokine PRON PRP _ _ _ _ _ 10 mRNA mRNa DET DT Definite=Ind|PronType=Art _ _ _ _ 11 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 shows show VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 little little ADJ JJ Degree=Pos _ _ _ _ 17 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 18 effect effect NOUN NN Number=Sing _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 NF Nf PROPN NNP Number=Sing _ _ _ _ 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ 25 B b PROPN NNP Number=Sing _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 9631 # text = Further examination reveals that, unlike IL-10, IL-4 enhances mRNA degradation and does not suppress cytokine gene transcription. 1 Further further ADJ JJ Degree=Pos _ _ _ _ 2 examination examination NOUN NN Number=Sing _ _ _ _ 3 reveals reveal NOUN NNS Number=Plur _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 unlike unlike ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 4 4 NUM CD NumType=Card _ _ _ _ 14 enhances enhance NOUN NNS Number=Plur _ _ _ _ 15 mRNA mRNa SYM SYM _ _ _ _ _ 16 degradation degradation NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 21 cytokine cytokine PRON PRP _ _ _ _ _ 22 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 9632 # text = These data indicate that IL-10 and IL-4 inhibit cytokine production by different mechanisms. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 10 10 NUM CD NumType=Card _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 4 4 NUM CD NumType=Card _ _ _ _ 12 inhibit inhibit NOUN NN Number=Sing _ _ _ _ 13 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 14 production production NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 different different ADJ JJ Degree=Pos _ _ _ _ 17 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9633 # text = Document 0030011885 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011885 0030011885 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9634 # text = Activation of lymphokine genes in T cells: role of cis-acting DNA elements that respond to T cell activation signals. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 4 genes gene NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 : : PUNCT : _ _ _ _ _ 9 role role NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 cis-acting cis-act ADJ JJ Degree=Pos _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 elements element NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 respond respond VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9635 # text = Activation of T cells is initiated by the recognition of antigen on antigen presenting cells to exert the effector functions in immune and inflammatory responses. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 initiated initiate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 recognition recognition NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 antigen antigen NUM CD NumType=Card _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 antigen antigen NUM CD NumType=Card _ _ _ _ 14 presenting present ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 exert exert VERB VB VerbForm=Inf _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 effector effector NOUN NN Number=Sing _ _ _ _ 20 functions function NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 immune immune ADJ JJ Degree=Pos _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 25 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 9636 # text = Two types of helper T cell (Th) clones (Th1 and Th2) are defined on the basis of different patterns of cytokine (lymphokine) secretion. 1 Two two NUM CD NumType=Card _ _ _ _ 2 types type NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 helper helper NOUN NN Number=Sing _ _ _ _ 5 T T PROPN NNP Number=Sing _ _ _ _ 6 cell cell PROPN NNP Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 Th th PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 clones clone NOUN NNS Number=Plur _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 Th1 Th1 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 Th2 th2 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 basis basis NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 different different ADJ JJ Degree=Pos _ _ _ _ 23 patterns pattern NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 lymphokine lymphokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 secretion secretion NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 9637 # text = They determine the outcome of an antigenic response toward humoral or cell-mediated immunity. 1 They they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 2 determine determine VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 outcome outcome NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 antigenic antigenic ADJ JJ Degree=Pos _ _ _ _ 8 response response NOUN NN Number=Sing _ _ _ _ 9 toward toward ADP IN _ _ _ _ _ 10 humoral humoral NOUN NN Number=Sing _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 immunity immunity NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 9638 # text = Although lymphokine genes are coordinately regulated upon antigen stimulation, they are regulated by the mechanisms common to all as well as those which are unique to each gene. 1 Although although SCONJ IN _ _ _ _ _ 2 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 3 genes gene NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 coordinately coordinately ADV RB _ _ _ _ _ 6 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 upon upon ADP IN _ _ _ _ _ 8 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 9 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 17 common common ADJ JJ Degree=Pos _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 all all DET DT _ _ _ _ _ 20 as as ADV RB _ _ _ _ _ 21 well well ADV RB Degree=Pos _ _ _ _ 22 as as ADP IN _ _ _ _ _ 23 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 unique unique ADJ JJ Degree=Pos _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 each each DET DT _ _ _ _ _ 29 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 9639 # text = For most lymphokine genes, a combination of phorbol esters (phorbol 12-myristate 13 acetate, PMA) and calcium ionophores (A23187) is required for their maximal induction. 1 For for ADP IN _ _ _ _ _ 2 most most ADJ JJS Degree=Sup _ _ _ _ 3 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 4 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 combination combination NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 10 esters ester NOUN NNS Number=Plur _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 13 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT : _ _ _ _ SpaceAfter=No 15 myristate myristate NOUN NN Number=Sing _ _ _ _ 16 13 13 NUM CD NumType=Card _ _ _ _ 17 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 calcium calcium NOUN NN Number=Sing _ _ _ _ 23 ionophores ionophore NOUN NNS Number=Plur _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 A23187 A23187 X LS _ _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 31 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 32 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 9640 # text = Yet phorbol ester alone or calcium ionophore alone produce several lymphokines. 1 Yet yet CCONJ CC _ _ _ _ _ 2 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 3 ester ester NOUN NN Number=Sing _ _ _ _ 4 alone alone ADV RB _ _ _ _ _ 5 or or CCONJ CC _ _ _ _ _ 6 calcium calcium VERB VB VerbForm=Inf _ _ _ _ 7 ionophore ionophore ADV RB _ _ _ _ _ 8 alone alone ADV RB _ _ _ _ _ 9 produce produce VERB VB VerbForm=Inf _ _ _ _ 10 several several ADJ JJ Degree=Pos _ _ _ _ 11 lymphokines lymphokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 9641 # text = The production of the granulocyte-macrophage colony stimulating factor (GM-CSF) is completely dependent on the two signals. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 production production NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 8 colony colony NOUN NN Number=Sing _ _ _ _ 9 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 completely completely ADV RB _ _ _ _ _ 18 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 two two NUM CD NumType=Card _ _ _ _ 22 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 9642 # text = We have previously found a cis-acting region spanning the GM-CSF promoter region (positions -95 to +27) that confers inducibility to reporter genes in transient transfection assays. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 acting act VERB VBG VerbForm=Ger _ _ _ _ 9 region region NOUN NN Number=Sing _ _ _ _ 10 spanning spann VERB VBG VerbForm=Ger _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 CSF CSF PROPN NNP Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 region region NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 positions position NOUN NNS Number=Plur _ _ _ _ 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 95 95 NUM CD NumType=Card _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 + + SYM SYM _ _ _ _ SpaceAfter=No 23 27 27 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 that that PRON WDT PronType=Rel _ _ _ _ 26 confers confer VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 inducibility inducibility NOUN NN Number=Sing _ _ _ _ 28 to to PART TO _ _ _ _ _ 29 reporter reporter VERB VB VerbForm=Inf _ _ _ _ 30 genes gene NOUN NNS Number=Plur _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 transient transient ADJ JJ Degree=Pos _ _ _ _ 33 transfection transfection NOUN NN Number=Sing _ _ _ _ 34 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 9643 # text = Further analysis identified three elements required for efficient induction, referred to as GM2, GC-box and conserved lymphokine element (CLE0). 1 Further further ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 three three NUM CD NumType=Card _ _ _ _ 5 elements element NOUN NNS Number=Plur _ _ _ _ 6 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 referred refer VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 GM2 Gm2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 GC GC NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 box box NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 22 element element NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 CLE0 CLE0 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 9644 # text = GM2 defines a binding site for protein(s) whose binding is inducible by PMA. 1 GM2 Gm2 NOUN NN Number=Sing _ _ _ _ 2 defines define VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 site site NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 s s X AFX _ _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 12 binding binding NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 9645 # text = One protein, NF-GM2 is similar to the transcription factor NF-kB. 1 One one NUM CD NumType=Card _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 GM2 Gm2 NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 similar similar ADJ JJ Degree=Pos _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kB. kB. PROPN NNP Number=Sing _ _ _ _ # sent_id = 9646 # text = GC-box is a binding site for constitutively bound proteins. 1 GC Gc NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 box box NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 binding binding VERB VBG VerbForm=Ger _ _ _ _ 7 site site NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 constitutively constitutively ADV RB _ _ _ _ _ 10 bound bound ADJ JJ Degree=Pos _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 9647 # text = CLEO defines a binding site for protein(s) whose optimum binding is stimulated by PMA and A23187. 1 CLEO Cleo NOUN NN Number=Sing _ _ _ _ 2 defines define VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 site site NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 s s X AFX _ _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 12 optimum optimum NOUN NN Number=Sing _ _ _ _ 13 binding binding VERB VBG VerbForm=Ger _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 PMA PMA PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 A a DET DT Definite=Ind|PronType=Art _ _ _ SpaceAfter=No 20 23187 23187 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 9648 # text = Viral trans-activators such as Tax (human T cell leukemia virus-1, HTLV-1) and E2 (bovine papilloma virus, BPV) proteins are other agents which activate lymphokine gene expression by bypassing T cell receptor (TCR) mediated signaling. 1 Viral viral ADJ JJ Degree=Pos _ _ _ _ 2 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 - - PUNCT : _ _ _ _ SpaceAfter=No 4 activators activator NOUN NNS Number=Plur _ _ _ _ 5 such such ADJ JJ Degree=Pos _ _ _ _ 6 as as ADP IN _ _ _ _ _ 7 Tax tax PROPN NNP Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 T t NOUN NN Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 13 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 X LS _ _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 E2 E2 NUM CD NumType=Card _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 bovine bovine NOUN NN Number=Sing _ _ _ _ 24 papilloma papilloma NOUN NN Number=Sing _ _ _ _ 25 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 BPV BPV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 proteins protein NOUN NNS Number=Plur _ _ _ _ 30 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 other other ADJ JJ Degree=Pos _ _ _ _ 32 agents agent NOUN NNS Number=Plur _ _ _ _ 33 which which PRON WDT PronType=Rel _ _ _ _ 34 activate activate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 lymphokine lymphokine PRON PRP _ _ _ _ _ 36 gene gene ADJ JJ Degree=Pos _ _ _ _ 37 expression expression NOUN NN Number=Sing _ _ _ _ 38 by by SCONJ IN _ _ _ _ _ 39 bypassing bypass VERB VBG VerbForm=Ger _ _ _ _ 40 T t PROPN NNP Number=Sing _ _ _ _ 41 cell cell NOUN NN Number=Sing _ _ _ _ 42 receptor receptor NOUN NN Number=Sing _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 TCR TCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ _ 46 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 9649 # text = The trans-activation domain of E2 and Tax is interchangeable although they have no obvious sequence homology between them. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 domain domain NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 E2 E2 NUM CD NumType=Card _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 Tax tax NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 interchangeable interchangeable ADJ JJ Degree=Pos _ _ _ _ 12 although although SCONJ IN _ _ _ _ _ 13 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 14 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 no no DET DT _ _ _ _ _ 16 obvious obvious ADJ JJ Degree=Pos _ _ _ _ 17 sequence sequence NOUN NN Number=Sing _ _ _ _ 18 homology homology NOUN NN Number=Sing _ _ _ _ 19 between between ADP IN _ _ _ _ _ 20 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 9650 # text = The viral trans-activators appear to target specific DNA binding protein such as NF-kB and Sp1 to cis-acting DNA site and promote lymphokine gene expression without TCR-mediated stimulation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 viral viral ADJ JJ Degree=Pos _ _ _ _ 3 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 - - PUNCT : _ _ _ _ SpaceAfter=No 5 activators activator NOUN NNS Number=Plur _ _ _ _ 6 appear appear VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 target target VERB VB VerbForm=Inf _ _ _ _ 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 such such ADJ JJ Degree=Pos _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kB kb PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 cis cis DET DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 22 -acting -act ADJ JJ Degree=Pos _ _ _ _ 23 DNA dna NOUN NN Number=Sing _ _ _ _ 24 site site NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 promote promote VERB VB VerbForm=Inf _ _ _ _ 27 lymphokine lymphokine PRON PRP _ _ _ _ _ 28 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 without without ADP IN _ _ _ _ _ 31 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9651 # text = Document 0030011887 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011887 0030011887 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9652 # text = Cloning of ARE-containing genes by AU-motif-directed display. 1 Cloning Cloning VERB VBG VerbForm=Ger _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 ARE Are NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 containing contain VERB VBG VerbForm=Ger _ _ _ _ 6 genes gene NOUN NNS Number=Plur _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 AU-motif AU-motif PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 display display NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9653 # text = A procedure suitable for cloning labile mRNAs that contain AU motifs is presented (AU-DD). 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 procedure procedure NOUN NN Number=Sing _ _ _ _ 3 suitable suitable ADJ JJ Degree=Pos _ _ _ _ 4 for for SCONJ IN _ _ _ _ _ 5 cloning clon VERB VBG VerbForm=Ger _ _ _ _ 6 labile labile ADJ JJ Degree=Pos _ _ _ _ 7 mRNAs mRNAs NOUN NNS Number=Plur _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 AU Au PRON PRP Case=Acc|Person=2|PronType=Prs _ _ _ _ 11 motifs motif NOUN NNS Number=Plur _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 presented present VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 AU AU PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 DD DD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 9654 # text = These motifs are regulatory sequences within the so-called AU-rich elements (AREs) often found in 3' untranslated regions of genes such as cytokines, proto-oncogenes, and transcription factors. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 motifs motif NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 5 sequences sequence NOUN NNS Number=Plur _ _ _ _ 6 within within ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 so so ADV RB _ _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 AU- Au- SYM NFP _ _ _ _ SpaceAfter=No 12 rich rich ADJ JJ Degree=Pos _ _ _ _ 13 elements element NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 AREs ARE NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 often often ADV RB _ _ _ _ _ 18 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ' ' PUNCT `` _ _ _ _ _ 22 untranslated untranslated ADJ JJ Degree=Pos _ _ _ _ 23 regions region NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 genes gene NOUN NNS Number=Plur _ _ _ _ 26 such such ADJ JJ Degree=Pos _ _ _ _ 27 as as ADP IN _ _ _ _ _ 28 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 -oncogenes -oncogene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ _ 35 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 9655 # text = AU-DD is an AU-motif-directed differential display that permits the identification of ARE-containing genes differentially expressed after cell activation. 1 AU AU PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 DD DD PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 AU-motif AU-motif ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 -directed -direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 differential differential ADJ JJ Degree=Pos _ _ _ _ 9 display display NOUN NN Number=Sing _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 permits permit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 identification identification NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 ARE Are ADV RB _ _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 containing containing VERB VBG VerbForm=Ger _ _ _ _ 18 genes gene NOUN NNS Number=Plur _ _ _ _ 19 differentially differentially ADV RB _ _ _ _ _ 20 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 after after ADP IN _ _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 9656 # text = It has been applied to peripheral blood monocytes and a T cell clone to isolate 59 cDNA fragments associated to activation. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 4 applied apply VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 7 blood blood NOUN NN Number=Sing _ _ _ _ 8 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 clone clone NOUN NN Number=Sing _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 isolate isolate VERB VB VerbForm=Inf _ _ _ _ 16 59 59 NUM CD NumType=Card _ _ _ _ 17 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 18 fragments fragment NOUN NNS Number=Plur _ _ _ _ 19 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 9657 # text = Fourteen percent of isolated fragments belong to already known genes that certainly are cytokines and transduction/transcription factors. 1 Fourteen Fourteen AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 2 percent percent ADJ JJ Degree=Pos _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 fragments fragment NOUN NNS Number=Plur _ _ _ _ 6 belong belong ADP IN _ _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 already already ADV RB _ _ _ _ _ 9 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 certainly certainly ADV RB _ _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 transduction transduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 9658 # text = The remaining 86% correspond to unknown genes of which 92% have been confirmed to be differentially expressed. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 remaining remaining ADJ JJ Degree=Pos _ _ _ _ 3 86 86 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 % % SYM NN Number=Sing _ _ _ _ 5 correspond correspond NOUN NN Number=Sing _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 unknown unknown ADJ JJ Degree=Pos _ _ _ _ 8 genes gene NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 which which DET WDT PronType=Int _ _ _ _ 11 92 92 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 % % SYM NN Number=Sing _ _ _ _ 13 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 15 confirmed confirm VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 differentially differentially ADV RB _ _ _ _ _ 19 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 9659 # text = These data demonstrate the efficiency of the system and support the notion that numerous genes falling into those categories remain unidentified and that they can be cloned by this method. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 efficiency efficiency NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 system system NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 support support VERB VB VerbForm=Inf _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 notion notion NOUN NN Number=Sing _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 numerous numerous ADJ JJ Degree=Pos _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ _ 16 falling fall VERB VBG VerbForm=Ger _ _ _ _ 17 into into ADP IN _ _ _ _ _ 18 those those DET DT Number=Plur|PronType=Dem _ _ _ _ 19 categories category NOUN NNS Number=Plur _ _ _ _ 20 remain remain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 unidentified unidentified ADJ JJ Degree=Pos _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 25 can can AUX MD VerbForm=Fin _ _ _ _ 26 be be AUX VB VerbForm=Inf _ _ _ _ 27 cloned clon VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 30 method method NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 9660 # text = Copyright 1998 Academic Press. 1 Copyright copyright NOUN NN Number=Sing _ _ _ _ 2 1998 1998 NUM CD NumType=Card _ _ _ _ 3 Academic academic PROPN NNP Number=Sing _ _ _ _ 4 Press. Press. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9661 # text = Document 0030011889 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011889 0030011889 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9662 # text = Role of ascorbate in the activation of NF-kappaB by tumour necrosis factor-alpha in T-cells. 1 Role role NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 ascorbate ascorbate NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 tumour tumour PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 13 necrosis necrosis ADJ JJ Degree=Pos _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9663 # text = The first product of ascorbate oxidation, the ascorbate free radical (AFR), acts in biological systems mainly as an oxidant, and through its role in the plasma membrane redox system exerts different effects on the cell. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 product product NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 ascorbate ascorbate ADJ JJ Degree=Pos _ _ _ _ 6 oxidation oxidation NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 ascorbate ascorbate NOUN NN Number=Sing _ _ _ _ 10 free free ADJ JJ Degree=Pos _ _ _ _ 11 radical radical ADJ JJ Degree=Pos _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 AFR AFR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 biological biological ADJ JJ Degree=Pos _ _ _ _ 19 systems system NOUN NNS Number=Plur _ _ _ _ 20 mainly mainly ADV RB _ _ _ _ _ 21 as as ADP IN _ _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 oxidant oxidant NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 through through ADP IN _ _ _ _ _ 27 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 28 role role NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 plasma plasma NOUN NN Number=Sing _ _ _ _ 32 membrane membrane NOUN NN Number=Sing _ _ _ _ 33 redox redox NOUN NN Number=Sing _ _ _ _ 34 system system NOUN NN Number=Sing _ _ _ _ 35 exerts exert NOUN NNS Number=Plur _ _ _ _ 36 different different ADJ JJ Degree=Pos _ _ _ _ 37 effects effect NOUN NNS Number=Plur _ _ _ _ 38 on on ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 9664 # text = We have investigated the role of ascorbate, AFR and dehydroascorbate (DHA) in the activation of the NF-kappaB transcription factor in Jurkat T-cells stimulated by tumour necrosis factor-alpha (TNF-alpha). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 ascorbate ascorbate NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 AFR Afr NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 dehydroascorbate dehydroascorbate NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 DHA DHA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 27 T- T- PUNCT , _ _ _ _ SpaceAfter=No 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 tumour tumour NOUN NN Number=Sing _ _ _ _ 32 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 33 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 alpha alpha NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 9665 # text = Here we show, by electrophoretic mobility shift assays, that ascorbate increases the binding of NF-kappaB to DNA in TNF-alpha-stimulated Jurkat cells. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 7 mobility mobility NOUN NN Number=Sing _ _ _ _ 8 shift shift NOUN NN Number=Sing _ _ _ _ 9 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 12 ascorbate ascorbate NOUN NN Number=Sing _ _ _ _ 13 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 binding binding VERB VBG VerbForm=Ger _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 DNA Dna PROPN NNP Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 9666 # text = The ability of ascorbate to enhance cytoplasmic inhibitory IkBalpha protein degradation correlates completely with its capacity to induce NF-kappaB binding to DNA and to potentiate NF-kappaB-mediated transactivation of the HIV-1 long terminal repeat promoter in TNF-alpha-stimulated Jurkat cells but not in cells stimulated with PMA plus ionomycin. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ability ability NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 ascorbate ascorbate NOUN NN Number=Sing _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 7 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 8 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 9 IkBalpha IkBalpha PROPN NNP Number=Sing _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 degradation degradation NOUN NN Number=Sing _ _ _ _ 12 correlates correlate NOUN NNS Number=Plur _ _ _ _ 13 completely completely ADV RB _ _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 capacity capacity NOUN NN Number=Sing _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 induce induce VERB VB VerbForm=Inf _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 DNA Dna NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 potentiate potentiate VERB VB VerbForm=Inf _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 1 1 NUM CD NumType=Card _ _ _ _ 39 long long ADJ JJ Degree=Pos _ _ _ _ 40 terminal terminal NOUN NN Number=Sing _ _ _ _ 41 repeat repeat NOUN NN Number=Sing _ _ _ _ 42 promoter promoter NOUN NN Number=Sing _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 49 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 50 cells cell NOUN NNS Number=Plur _ _ _ _ 51 but but CCONJ CC _ _ _ _ _ 52 not not PART RB _ _ _ _ _ 53 in in ADP IN _ _ _ _ _ 54 cells cell NOUN NNS Number=Plur _ _ _ _ 55 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 56 with with ADP IN _ _ _ _ _ 57 PMA Pma PROPN NNP Number=Sing _ _ _ _ 58 plus plus CCONJ CC _ _ _ _ _ 59 ionomycin ionomycin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 9667 # text = AFR behaves like ascorbate, while DHA and ascorbate phosphate do not affect TNF-alpha-mediated NF-kappaB activation. 1 AFR Afr ADJ JJR Degree=Cmp _ _ _ _ 2 behaves behave NOUN NNS Number=Plur _ _ _ _ 3 like like ADP IN _ _ _ _ _ 4 ascorbate ascorbate NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 while while SCONJ IN _ _ _ _ _ 7 DHA DHA PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 ascorbate ascorbate ADJ JJ Degree=Pos _ _ _ _ 10 phosphate phosphate NOUN NN Number=Sing _ _ _ _ 11 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 affect affect VERB VB VerbForm=Inf _ _ _ _ 14 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 9668 # text = These results provide new evidence for a possible relationship between the activation of the electron-transport system at the plasma membrane by ascorbate or its free radical and redox-dependent gene transcription in T-cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 new new ADJ JJ Degree=Pos _ _ _ _ 5 evidence evidence NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 possible possible ADJ JJ Degree=Pos _ _ _ _ 9 relationship relationship NOUN NN Number=Sing _ _ _ _ 10 between between ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 electron electron NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 transport transport NOUN NN Number=Sing _ _ _ _ 18 system system NOUN NN Number=Sing _ _ _ _ 19 at at ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 plasma plasma NOUN NN Number=Sing _ _ _ _ 22 membrane membrane NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 ascorbate ascorbate NOUN NN Number=Sing _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 27 free free ADJ JJ Degree=Pos _ _ _ _ 28 radical radical ADJ JJ Degree=Pos _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 redox redox ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9669 # text = Document 0030011891 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011891 0030011891 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9670 # text = Stimulation of interferon beta gene transcription in vitro by purified NF-kappa B and a novel TH protein. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 interferon interferon ADJ JJ Degree=Pos _ _ _ _ 4 beta beta NOUN NN Number=Sing _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 vitro vitro NUM CD NumType=Card _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ 14 B b PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 novel novel NOUN NN Number=Sing _ _ _ _ 18 TH th NOUN NN Number=Sing _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9671 # text = The human interferon beta (IFN-beta) regulatory element consists of multiple enhanson domains which are targets for transcription factors involved in inducible expression of the promoter. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 interferon interferon NOUN NN Number=Sing _ _ _ _ 4 beta beta NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 11 element element NOUN NN Number=Sing _ _ _ _ 12 consists consist NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 15 enhanson enhanson NOUN NN Number=Sing _ _ _ _ 16 domains domain NOUN NNS Number=Plur _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 targets target NOUN NNS Number=Plur _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ _ 23 involved involved ADJ JJ Degree=Pos _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 9672 # text = To further characterize the protein-DNA interactions mediating IFN-beta induction, positive regulatory domain (PRD) II binding proteins were purified from phorbol ester induced Jurkat T-cells and from IFN primed, cycloheximide/polyinosinic-polycytidylic acid treated HeLa S3 cells. 1 To to PART TO _ _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 characterize characterize VERB VB VerbForm=Inf _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 DNA dna NOUN NN Number=Sing _ _ _ _ 8 interactions interaction NOUN NNS Number=Plur _ _ _ _ 9 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 10 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 beta beta NOUN NN Number=Sing _ _ _ _ 13 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 positive positive ADJ JJ Degree=Pos _ _ _ _ 16 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 17 domain domain NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 PRD pRd NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 II ii NUM CD NumType=Card _ _ _ _ 22 binding binding VERB VBG VerbForm=Ger _ _ _ _ 23 proteins protein NOUN NNS Number=Plur _ _ _ _ 24 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 purified purify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 from from ADP IN _ _ _ _ _ 27 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 28 ester ester NOUN NN Number=Sing _ _ _ _ 29 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 31 T- T- SYM NFP _ _ _ _ SpaceAfter=No 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 from from ADP IN _ _ _ _ _ 35 IFN IFN PROPN NNP Number=Sing _ _ _ _ 36 primed prim VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 cycloheximide/polyinosinic cycloheximide/polyinosinic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 polycytidylic polycytidylic ADJ JJ Degree=Pos _ _ _ _ 41 acid acid NOUN NN Number=Sing _ _ _ _ 42 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 44 S3 S3 PROPN NNP Number=Sing _ _ _ _ 45 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 9673 # text = From HeLa cells, two major proteins of 52 and 45 kilodaltons (kD) copurified with DNA binding activity, whereas from T-cells, four proteins--a major protein of 52 kD and three minor proteins of 82, 67, and 43-47 kD--were purified. 1 From from ADP IN _ _ _ _ _ 2 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 two two NUM CD NumType=Card _ _ _ _ 6 major major ADJ JJ Degree=Pos _ _ _ _ 7 proteins protein NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 52 52 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 45 45 NUM CD NumType=Card _ _ _ _ 12 kilodaltons kilodalton NOUN NNS Number=Plur _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 kD k NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 copurified copurify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 DNA dna NOUN NN Number=Sing _ _ _ _ 19 binding binding VERB VBG VerbForm=Ger _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 whereas wherea SCONJ IN _ _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 four four NUM CD NumType=Card _ _ _ _ 28 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 -- -- PUNCT , _ _ _ _ SpaceAfter=No 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 major major ADJ JJ Degree=Pos _ _ _ _ 32 protein protein NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 52 52 NUM CD NumType=Card _ _ _ _ 35 kD kD NOUN NN Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 three three NUM CD NumType=Card _ _ _ _ 38 minor minor ADJ JJ Degree=Pos _ _ _ _ 39 proteins protein NOUN NNS Number=Plur _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 82 82 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 67 67 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 43 43 NUM CD NumType=Card _ _ _ SpaceAfter=No 47 - - SYM SYM _ _ _ _ SpaceAfter=No 48 47 47 NUM CD NumType=Card _ _ _ _ 49 kD kD NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 -- -- PUNCT , _ _ _ _ SpaceAfter=No 51 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 52 purified purify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 9674 # text = Also, an induction specific DNA binding protein was purified from HeLa cells that interacted with the (AAGTGA)4 tetrahexamer sequence and the PRDI domain. 1 Also also ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 induction induction NOUN NN Number=Sing _ _ _ _ 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ _ 7 binding binding VERB VBG VerbForm=Ger _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 purified purify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 interacted interact VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 AAGTGA AAGTGA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 4 4 NUM CD NumType=Card _ _ _ _ 22 tetrahexamer tetrahexamer NOUN NN Number=Sing _ _ _ _ 23 sequence sequence NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 PRDI PRDI PROPN NNP Number=Sing _ _ _ _ 27 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 9675 # text = This protein is immunologically distinct from IRF-1/ISGF2. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 immunologically immunologically ADV RB _ _ _ _ _ 5 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1/ISGF2 1/isgf2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 9676 # text = Uninduced or Sendai virus induced HeLa extracts were used to examine transcription in vitro using a series of IFN beta promoter deletions. 1 Uninduced Uninduce PROPN NNP Number=Sing _ _ _ _ 2 or or CCONJ CC _ _ _ _ _ 3 Sendai Sendbe PROPN NNP Number=Sing _ _ _ _ 4 virus virus NOUN NN Number=Sing _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 7 extracts extract NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 examine examine VERB VB VerbForm=Inf _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 vitro vitro NOUN NN Number=Sing _ _ _ _ 15 using use VERB VBG VerbForm=Ger _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 series series NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 IFN IFN PROPN NNP Number=Sing _ _ _ _ 20 beta beta PROPN NNP Number=Sing _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 deletions deletion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 9677 # text = Deletions upstream of the PRDII element increased transcription in the uninduced extract, indicating predominantly negative regulation of the promoter. 1 Deletions Deletion NOUN NNS Number=Plur _ _ _ _ 2 upstream upstream NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 PRDII PRDII PROPN NNP Number=Sing _ _ _ _ 6 element element NOUN NN Number=Sing _ _ _ _ 7 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 uninduced uninduced ADJ JJ Degree=Pos _ _ _ _ 12 extract extract NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 15 predominantly predominantly ADV RB _ _ _ _ _ 16 negative negative ADJ JJ Degree=Pos _ _ _ _ 17 regulation regulation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 9678 # text = A 2-4-fold increase in IFN-beta promoter transcription was observed in Sendai virus induced extracts, and deletion of PRDI and PRDII elements decreased this induced level of transcription. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - SYM SYM _ _ _ _ SpaceAfter=No 4 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 fold fold NOUN NN Number=Sing _ _ _ _ 7 increase increase NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 IFN Ifn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 beta beta NOUN NN Number=Sing _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 Sendai Sendai PROPN NNP Number=Sing _ _ _ _ 18 virus virus NOUN NN Number=Sing _ _ _ _ 19 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 deletion deletion NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 PRDI PRDI PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 PRDII Prdii PROPN NNP Number=Sing _ _ _ _ 28 elements element NOUN NNS Number=Plur _ _ _ _ 29 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 31 induced induced VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 level level NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 9679 # text = When purified PRDII and tetrahexamer binding proteins were added to the induced extract, a 4-fold increase in transcription was observed. 1 When when ADV WRB PronType=Int _ _ _ _ 2 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 PRDII pRDIi NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 tetrahexamer tetrahexamer NOUN NN Number=Sing _ _ _ _ 6 binding binding VERB VBG VerbForm=Ger _ _ _ _ 7 proteins protein NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 added add VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 extract extract NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 fold fold NOUN NN Number=Sing _ _ _ _ 19 increase increase NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 9680 # text = These experiments demonstrate that it is possible to modulate IFN-beta transcription in vitro but indicate that additional proteins may be required to fully activate IFN-beta transcription. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 experiments experiment NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 possible possible ADJ JJ Degree=Pos _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 10 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 beta beta NOUN NN Number=Sing _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 vitro vitro NOUN NN Number=Sing _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 additional additional ADJ JJ Degree=Pos _ _ _ _ 20 proteins protein NOUN NNS Number=Plur _ _ _ _ 21 may may AUX MD VerbForm=Fin _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 fully fully ADV RB _ _ _ _ _ 26 activate activate VERB VB VerbForm=Inf _ _ _ _ 27 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 beta beta NOUN NN Number=Sing _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9681 # text = Document 0030011893 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011893 0030011893 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9682 # text = Cross-linking CD40 on B cells rapidly activates nuclear factor-kappa B. 1 Cross cross PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 linking link VERB VBG VerbForm=Ger _ _ _ _ 4 CD40 CD40 NOUN NN Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 B b ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 rapidly rapidly ADV RB _ _ _ _ _ 9 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9683 # text = The B cell-associated surface molecule CD40 functions to regulate B cell responses. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 B B NOUN NN Number=Sing _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 surface surface NOUN NN Number=Sing _ _ _ _ 7 molecule molecule NOUN NN Number=Sing _ _ _ _ 8 CD40 CD40 NUM CD NumType=Card _ _ _ _ 9 functions function NOUN NNS Number=Plur _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 12 B b ADJ JJ Degree=Pos _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 9684 # text = Cross-linking CD40 on B cells can lead to homotypic cell adhesion, IL-6 production, and, in combination with cytokines, to Ig isotype switching. 1 Cross cross PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 linking link VERB VBG VerbForm=Ger _ _ _ _ 4 CD40 CD40 NOUN NN Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 B b ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 lead lead VERB VB VerbForm=Inf _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 homotypic homotypic ADJ JJ Degree=Pos _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 6 6 NUM CD NumType=Card _ _ _ _ 18 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 combination combination NOUN NN Number=Sing _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 Ig ig VERB VB VerbForm=Inf _ _ _ _ 29 isotype isotype NOUN NN Number=Sing _ _ _ _ 30 switching switch VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 9685 # text = Tyrosine kinase activity is increased shortly after engagement of this receptor. 1 Tyrosine Tyrosine NOUN NN Number=Sing _ _ _ _ 2 kinase kinase NOUN NN Number=Sing _ _ _ _ 3 activity activity NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 shortly shortly ADV RB _ _ _ _ _ 7 after after ADP IN _ _ _ _ _ 8 engagement engagement NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 9686 # text = Little is known about how the very early events induced by CD40 cross-linking link to cellular responses. 1 Little little PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 about about SCONJ IN _ _ _ _ _ 5 how how ADV WRB PronType=Int _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 very very ADV RB _ _ _ _ _ 8 early early ADJ JJ Degree=Pos _ _ _ _ 9 events event NOUN NNS Number=Plur _ _ _ _ 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 13 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 linking link NOUN NN Number=Sing _ _ _ _ 16 link link NOUN NN Number=Sing _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 19 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 9687 # text = In this study, we demonstrate that nuclear factor (NF)-kappa B and NF-kappa B-like transcription factors are activated after cross-linking CD40 on resting human tonsillar B cells and on B cell lines. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 like like ADJ JJ Degree=Pos _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factors factor NOUN NNS Number=Plur _ _ _ _ 25 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 after after ADP IN _ _ _ _ _ 28 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 30 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 31 on on SCONJ IN _ _ _ _ _ 32 resting rest VERB VBG VerbForm=Ger _ _ _ _ 33 human human ADJ JJ Degree=Pos _ _ _ _ 34 tonsillar tonsillar NOUN NN Number=Sing _ _ _ _ 35 B b ADJ JJ Degree=Pos _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 on on ADP IN _ _ _ _ _ 39 B b ADJ JJ Degree=Pos _ _ _ _ 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 9688 # text = The activation is rapid and is mediated through a tyrosine kinase-dependent pathway. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 through through ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 14 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 9689 # text = The complexes detected in electrophoretic mobility shift assays contain p50, p65 (RelA), c-Rel, and most likely other components. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 complexes complexe NOUN NNS Number=Plur _ _ _ _ 3 detected detect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 6 mobility mobility NOUN NN Number=Sing _ _ _ _ 7 shift shift NOUN NN Number=Sing _ _ _ _ 8 assays assay NOUN NNS Number=Plur _ _ _ _ 9 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 p65 p65 NUM CD NumType=Card _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 RelA Rela NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 c- c- SYM NFP _ _ _ _ SpaceAfter=No 18 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 most most ADV RBS _ _ _ _ _ 22 likely likely ADJ JJ Degree=Pos _ _ _ _ 23 other other ADJ JJ Degree=Pos _ _ _ _ 24 components component NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 9690 # text = By using transient transfection assays, we found that cross-linking CD40 supports NF-kappa B-dependent gene expression. 1 By by SCONJ IN _ _ _ _ _ 2 using use VERB VBG VerbForm=Ger _ _ _ _ 3 transient transient ADJ JJ Degree=Pos _ _ _ _ 4 transfection transfection NOUN NN Number=Sing _ _ _ _ 5 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 8 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 cross cross PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 12 CD40 CD40 NUM CD NumType=Card _ _ _ _ 13 supports support NOUN NNS Number=Plur _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa PROPN NNP Number=Sing _ _ _ _ 17 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 9691 # text = Our results define the NF-kappa B system as an intermediate event in CD40 signaling and suggest that the CD40 pathway can influence the expression of B cell-associated genes with NF-kappa B consensus sites. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 define define VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 system system NOUN NN Number=Sing _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 intermediate intermediate ADJ JJ Degree=Pos _ _ _ _ 13 event event NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 CD40 CD40 NUM CD NumType=Card _ _ _ _ 16 signaling signaling NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 CD40 CD40 NOUN NN Number=Sing _ _ _ _ 22 pathway pathway NOUN NN Number=Sing _ _ _ _ 23 can can AUX MD VerbForm=Fin _ _ _ _ 24 influence influence VERB VB VerbForm=Inf _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 genes gene NOUN NNS Number=Plur _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 kappa kappa NOUN NN Number=Sing _ _ _ _ 37 B b NOUN NN Number=Sing _ _ _ _ 38 consensus consensus NOUN NN Number=Sing _ _ _ _ 39 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9692 # text = Document 0030011895 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011895 0030011895 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9693 # text = Intranuclear targeted delivery of functional NF-kappaB by 70 kDa heat shock protein. 1 Intranuclear Intranuclear PROPN NNP Number=Sing _ _ _ _ 2 targeted target VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 delivery delivery NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 functional functional ADJ JJ Degree=Pos _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 70 70 NUM CD NumType=Card _ _ _ _ 11 kDa kDa PROPN NNP Number=Sing _ _ _ _ 12 heat heat NOUN NN Number=Sing _ _ _ _ 13 shock shock NOUN NN Number=Sing _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9694 # text = The 70 kDa heat shock protein (Hsp70) is a highly conserved, ubiquitous protein involved in chaperoning proteins to various cellular organelles. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 70 70 NUM CD NumType=Card _ _ _ _ 3 kDa kDa PROPN NNP Number=Sing _ _ _ _ 4 heat heat NOUN NN Number=Sing _ _ _ _ 5 shock shock NOUN NN Number=Sing _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 Hsp70 Hsp70 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 highly highly ADV RB _ _ _ _ _ 13 conserved conserved ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 in in SCONJ IN _ _ _ _ _ 19 chaperoning chaperon VERB VBG VerbForm=Ger _ _ _ _ 20 proteins protein NOUN NNS Number=Plur _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 various various ADJ JJ Degree=Pos _ _ _ _ 23 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 24 organelles organelle NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 9695 # text = Here we show that when added exogenously to cells, Hsp70 is readily imported into both cytoplasmic and nuclear compartments in a cell-type-specific fashion. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 when when ADV WRB PronType=Int _ _ _ _ 6 added add VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 exogenously exogenously ADV RB _ _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 Hsp70 Hsp70 PROPN NNP Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 readily readily ADV RB _ _ _ _ _ 14 imported import VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 into into ADP IN _ _ _ _ _ 16 both both CCONJ CC _ _ _ _ _ 17 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 compartments compartment NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 specific specific ADJ JJ Degree=Pos _ _ _ _ 28 fashion fashion NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 9696 # text = We exploited this ability of Hsp70 to deliver NF-kappaB, a key transcriptional regulator of inflammatory responses. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 exploited exploit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 ability ability NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 Hsp70 Hsp70 PROPN NNP Number=Sing _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 deliver deliver VERB VB VerbForm=Inf _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 key key ADJ JJ Degree=Pos _ _ _ _ 15 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 16 regulator regulator NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 19 responses respons NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 9697 # text = We demonstrate that a fusion protein composed of a C-terminal Hsp70 peptide and the p50 subunit of NF-kappaB was directed into the nucleus of cells, could bind DNA specifically, and activated Igkappa expression and TNFalpha production. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 fusion fusion NOUN NN Number=Sing _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 composed compose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 13 Hsp70 Hsp70 NOUN NN Number=Sing _ _ _ _ 14 peptide peptide NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 p50 p50 NOUN NN Number=Sing _ _ _ _ 18 subunit subunit NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 directed direct VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 into into ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 could could AUX MD VerbForm=Fin _ _ _ _ 32 bind bind VERB VB VerbForm=Inf _ _ _ _ 33 DNA dna NOUN NN Number=Sing _ _ _ _ 34 specifically specifically ADV RB _ _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 38 Igkappa Igkappa PROPN NNP Number=Sing _ _ _ _ 39 expression expression NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 42 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 9698 # text = We therefore propose that Hsp70 can be used as a vehicle for intracytoplasmic and intranuclear delivery of proteins or DNA to modulate gene expression and thereby control immune responses. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 therefore therefore ADV RB _ _ _ _ _ 3 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Hsp70 Hsp70 PROPN NNP Number=Sing _ _ _ _ 6 can can AUX MD VerbForm=Fin _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 vehicle vehicle NOUN NN Number=Sing _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 intracytoplasmic intracytoplasmic ADJ JJ Degree=Pos _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 intranuclear intranuclear ADJ JJ Degree=Pos _ _ _ _ 16 delivery delivery NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 proteins protein NOUN NNS Number=Plur _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 DNA dna NOUN NN Number=Sing _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 thereby thereby ADV RB _ _ _ _ _ 27 control control VERB VB VerbForm=Inf _ _ _ _ 28 immune immune ADJ JJ Degree=Pos _ _ _ _ 29 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9699 # text = Document 0030011899 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011899 0030011899 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9700 # text = A negative regulatory region containing a glucocorticosteroid response element (nGRE) in the human interleukin-1beta gene. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 negative negative ADJ JJ Degree=Pos _ _ _ _ 3 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 4 region region NOUN NN Number=Sing _ _ _ _ 5 containing contain VERB VBG VerbForm=Ger _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 glucocorticosteroid glucocorticosteroid ADJ JJ Degree=Pos _ _ _ _ 8 response response NOUN NN Number=Sing _ _ _ _ 9 element element NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 nGRE nGRE ADV RB PronType=Dem _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 beta beta NOUN NN Number=Sing _ _ _ _ 19 gene. gene. NOUN NN Number=Sing _ _ _ SpacesAfter=\s\n # sent_id = 9701 # text = Interleukin-1 beta (IL-1beta) is one of the most important inflammatory mediators in human inflammatory and immunological diseases. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 beta beta NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 one one NUM CD NumType=Card _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 most most ADV RBS _ _ _ _ _ 16 important important ADJ JJ Degree=Pos _ _ _ _ 17 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 18 mediators mediator NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 immunological immunological ADJ JJ Degree=Pos _ _ _ _ 24 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 9702 # text = The regulation of human IL-1beta gene expression has been studied for several years, and a few regulatory elements have been discovered in the promoter region. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 beta beta NOUN NN Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 13 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 several several ADJ JJ Degree=Pos _ _ _ _ 16 years year NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 few few ADJ JJ Degree=Pos _ _ _ _ 21 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 22 elements element NOUN NNS Number=Plur _ _ _ _ 23 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 25 discovered discover VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ _ 29 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 9703 # text = However, little is known about negative regulation of IL-1beta expression at the transcriptional level, which may play an important role in anti-inflammatory and immunosuppressive effects. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 little little ADJ JJ Degree=Pos _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 known known VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 about about ADP IN _ _ _ _ _ 7 negative negative ADJ JJ Degree=Pos _ _ _ _ 8 regulation regulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 beta beta NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 at at ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 which which PRON WDT PronType=Rel _ _ _ _ 21 may may AUX MD VerbForm=Fin _ _ _ _ 22 play play VERB VB VerbForm=Inf _ _ _ _ 23 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 important important ADJ JJ Degree=Pos _ _ _ _ 25 role role NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 30 effects effect NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 9704 # text = We have identified a negative regulatory element located in the region between -685 and -395. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 negative negative ADJ JJ Degree=Pos _ _ _ _ 6 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 7 element element NOUN NN Number=Sing _ _ _ _ 8 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 region region NOUN NN Number=Sing _ _ _ _ 12 between between ADP IN _ _ _ _ _ 13 -685 -685 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 - - SYM SYM _ _ _ _ SpaceAfter=No 16 395 395 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 9705 # text = Within this region, a 19-bp nuclear factor binding site (-570 to -552) was characterized by DNase I footprinting and electromobility shift assay. 1 Within within ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 19 19 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 bp bp NOUN NN Number=Sing _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ _ 13 (-570 (-570 NUM CD NumType=Card _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 - - SYM SYM _ _ _ _ SpaceAfter=No 16 552 552 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 characterized characterize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 DNase DNase NOUN NN Number=Sing _ _ _ _ 22 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 23 footprinting footprint VERB VBG VerbForm=Ger _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 electromobility electromobility NOUN NN Number=Sing _ _ _ _ 26 shift shift NOUN NN Number=Sing _ _ _ _ 27 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 9706 # text = A consensus sequence for a negative glucocorticoid response element (nGRE) and a transcription activator protein-2 binding site were noted within this footprint. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 consensus consensus NOUN NN Number=Sing _ _ _ _ 3 sequence sequence NOUN NN Number=Sing _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 negative negative ADJ JJ Degree=Pos _ _ _ _ 7 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 8 response response NOUN NN Number=Sing _ _ _ _ 9 element element NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 nGRE nGRE NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 activator activator NOUN NN Number=Sing _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ _ 20 binding binding NOUN NN Number=Sing _ _ _ _ 21 site site NOUN NN Number=Sing _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 noted note VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 within within ADP IN _ _ _ _ _ 25 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 26 footprint footprint NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 9707 # text = Functional studies showed a 2.5-fold increase in promoter activity when this 19-bp binding site was deleted in the reporter constructs IL-1beta/CAT and IL-1beta/SV40 promoter/CAT. 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 2.5 2.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 fold fold NOUN NN Number=Sing _ _ _ _ 8 increase increase NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 promoter promoter ADJ JJ Degree=Pos _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 when when ADV WRB PronType=Int _ _ _ _ 13 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 14 19 19 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT : _ _ _ _ SpaceAfter=No 16 bp bp NOUN NN Number=Sing _ _ _ _ 17 binding binding VERB VBG VerbForm=Ger _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 deleted delete VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 reporter reporter NOUN NN Number=Sing _ _ _ _ 24 constructs construct VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 / / PUNCT , _ _ _ _ SpaceAfter=No 30 CAT cat NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 / / PUNCT , _ _ _ _ SpaceAfter=No 37 SV40 SV40 NUM CD NumType=Card _ _ _ _ 38 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 / / PUNCT , _ _ _ _ SpaceAfter=No 40 CAT. CAT. PROPN NNP Number=Sing _ _ _ _ # sent_id = 9708 # text = Dexamethasone (10(-8) M) repressed chloramphenicol acetyltransferase (CAT) production by 75% in the wild-type fragment but not in a deletion mutant lacking the 19-bp site. 1 Dexamethasone Dexamethasone PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 (- (- PUNCT . _ _ _ _ SpaceAfter=No 5 8 8 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 M be NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 repressed repress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 11 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 CAT cat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 production production NOUN NN Number=Sing _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 75 75 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 % % SYM NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 type type NOUN NN Number=Sing _ _ _ _ 24 fragment fragment NOUN NN Number=Sing _ _ _ _ 25 but but CCONJ CC _ _ _ _ _ 26 not not PART RB _ _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 deletion deletion NOUN NN Number=Sing _ _ _ _ 30 mutant mutant NOUN NN Number=Sing _ _ _ _ 31 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 19 19 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 bp bp NOUN NN Number=Sing _ _ _ _ 36 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 9709 # text = A protein of about 150 kD that bound to this negative regulatory sequence was identified by UV cross-linking. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 about about ADV RB _ _ _ _ _ 5 150 150 NUM CD NumType=Card _ _ _ _ 6 kD kD NOUN NN Number=Sing _ _ _ _ 7 that that ADV WRB PronType=Rel _ _ _ _ 8 bound bound ADJ JJ Degree=Pos _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 negative negative ADJ JJ Degree=Pos _ _ _ _ 12 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 13 sequence sequence NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 UV UV PROPN NNP Number=Sing _ _ _ _ 18 cross cross PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 -linking -linking VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 9710 # text = This is the first description of a negative regulatory region responsive to glucocorticoids in a cytokine gene. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 5 description description NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 negative negative ADJ JJ Degree=Pos _ _ _ _ 9 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 10 region region NOUN NN Number=Sing _ _ _ _ 11 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9711 # text = Document 0030011900 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011900 0030011900 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9712 # text = Differences in transcriptional enhancers of HIV-1 and HIV-2. 1 Differences difference NOUN NNS Number=Plur _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 4 enhancers enhancer NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 9713 # text = Response to T cell activation signals. 1 Response response NOUN NN Number=Sing _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9714 # text = T cell activation results in high levels of HIV replication and is thought to be one mechanism leading to the conversion from latent to active viral infection. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 high high ADJ JJ Degree=Pos _ _ _ _ 7 levels level NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 HIV Hiv NOUN NN Number=Sing _ _ _ _ 10 replication replication NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 one one NUM CD NumType=Card _ _ _ _ 17 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 18 leading lead VERB VBG VerbForm=Ger _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 conversion conversion NOUN NN Number=Sing _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 latent latent NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 active active ADJ JJ Degree=Pos _ _ _ _ 26 viral viral ADJ JJ Degree=Pos _ _ _ _ 27 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 9715 # text = In HIV-1, the sequences that respond to these signaling events are found in the long terminal repeat (LTR) and comprise the transcriptional enhancer, which contains two conserved binding sites for the nuclear factor kappa B (NF kappa 1 In in ADP IN _ _ _ _ _ 2 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 sequences sequence NOUN NNS Number=Plur _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 respond respond VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 12 signaling signaling NOUN NN Number=Sing _ _ _ _ 13 events event NOUN NNS Number=Plur _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 long long ADJ JJ Degree=Pos _ _ _ _ 19 terminal terminal NOUN NN Number=Sing _ _ _ _ 20 repeat repeat NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 comprise comprise VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 28 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 which which PRON WDT PronType=Rel _ _ _ _ 31 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 two two NUM CD NumType=Card _ _ _ _ 33 conserved conserve VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 binding bind VERB VBG VerbForm=Ger _ _ _ _ 35 sites site NOUN NNS Number=Plur _ _ _ _ 36 for for ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 39 factor factor NOUN NN Number=Sing _ _ _ _ 40 kappa kappa NOUN NN Number=Sing _ _ _ _ 41 B b PROPN NNP Number=Sing _ _ _ _ 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 NF NF PROPN NNP Number=Sing _ _ _ _ 44 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 9716 # text = B). 1 B b X LS _ _ _ _ SpaceAfter=No 2 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 3 . . PUNCT . _ _ _ _ _ # sent_id = 9717 # text = The corresponding region in the second AIDS retrovirus, HIV-2, contains a conserved and a divergent NF kappa B binding site. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 corresponding corresponding NOUN NN Number=Sing _ _ _ _ 3 region region NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 7 AIDS aids NOUN NN Number=Sing _ _ _ _ 8 retrovirus retrovirus NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 divergent divergent ADJ JJ Degree=Pos _ _ _ _ 20 NF NF PROPN NNP Number=Sing _ _ _ _ 21 kappa kappa PROPN NNP Number=Sing _ _ _ _ 22 B b PROPN NNP Number=Sing _ _ _ _ 23 binding bind VERB VBG VerbForm=Ger _ _ _ _ 24 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 9718 # text = We demonstrate that the HIV-1 LTR responds better than the HIV-2 LTR to T cell activation signals. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 LTR Ltr NOUN NN Number=Sing _ _ _ _ 9 responds respond NOUN NNS Number=Plur _ _ _ _ 10 better better ADJ JJR Degree=Cmp _ _ _ _ 11 than than ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 LTR Ltr NOUN NN Number=Sing _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 9719 # text = These qualitative differences in the response to T cell activation are reproduced not only when HIV-1 or HIV-2 enhancers are placed upstream of a heterologous promoter but also when these enhancers are switched between their respective LTR. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 qualitative qualitative ADJ JJ Degree=Pos _ _ _ _ 3 differences difference NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 response response NOUN NN Number=Sing _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 reproduced reproduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 not not ADV RB _ _ _ _ _ 14 only only ADV RB _ _ _ _ _ 15 when when ADV WRB PronType=Int _ _ _ _ 16 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 enhancers enhancer NOUN NNS Number=Plur _ _ _ _ 24 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 placed place VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 upstream upstream NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 30 promoter promoter NOUN NN Number=Sing _ _ _ _ 31 but but CCONJ CC _ _ _ _ _ 32 also also ADV RB _ _ _ _ _ 33 when when ADV WRB PronType=Int _ _ _ _ 34 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 35 enhancers enhancer NOUN NNS Number=Plur _ _ _ _ 36 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 37 switched switch VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 between between ADP IN _ _ _ _ _ 39 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 40 respective respective ADJ JJ Degree=Pos _ _ _ _ 41 LTR Ltr NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 9720 # text = In electrophoretic mobility shift assays, NF kappa B binds to both conserved sites in the HIV-1 transcriptional enhancer and only to the single conserved site in the HIV-2 transcriptional enhancer. 1 In in ADP IN _ _ _ _ _ 2 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 3 mobility mobility NOUN NN Number=Sing _ _ _ _ 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assays assays NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ _ 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B B PROPN NNP Number=Sing _ _ _ _ 10 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 both both CCONJ CC _ _ _ _ _ 13 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 sites site NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 21 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 only only ADV RB _ _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 single single ADJ JJ Degree=Pos _ _ _ _ 27 conserved conserve ADJ JJ Degree=Pos _ _ _ _ 28 site site NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 2 2 NUM CD NumType=Card _ _ _ _ 34 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 35 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 9721 # text = Instead of NF kappa B, the activator protein 3 binds to the divergent site in HIV-2. 1 Instead instead ADV RB _ _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ _ 4 kappa kappa PROPN NNP Number=Sing _ _ _ _ 5 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 activator activator NOUN NN Number=Sing _ _ _ _ 9 protein protein ADV WRB PronType=Rel _ _ _ _ 10 3 3 NUM CD NumType=Card _ _ _ _ 11 binds bind NOUN NNS Number=Plur _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 divergent divergent ADJ JJ Degree=Pos _ _ _ _ 15 site site NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 9722 # text = In conclusion, HIV-1 and HIV-2 are differentially regulated by T cell activation signals, and this difference may account for the longer period of viral latency observed with HIV-2 than with HIV-1 infection. 1 In in ADP IN _ _ _ _ _ 2 conclusion conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 differentially differentially ADV RB _ _ _ _ _ 13 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 22 difference difference NOUN NN Number=Sing _ _ _ _ 23 may may AUX MD VerbForm=Fin _ _ _ _ 24 account account VERB VB VerbForm=Inf _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 longer longer ADJ JJ Degree=Pos _ _ _ _ 28 period period NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 viral viral ADJ JJ Degree=Pos _ _ _ _ 31 latency latency NOUN NN Number=Sing _ _ _ _ 32 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 2 2 NUM CD NumType=Card _ _ _ _ 37 than than ADP IN _ _ _ _ _ 38 with with ADP IN _ _ _ _ _ 39 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 1 1 NUM CD NumType=Card _ _ _ _ 42 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9723 # text = Document 0030011907 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011907 0030011907 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9724 # text = Involvement of NF-kappaB p50/p65 heterodimer in activation of the human pro-interleukin-1beta gene at two subregions of the upstream enhancer element. 1 Involvement involvement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 6 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 p65 p65 NUM CD NumType=Card _ _ _ _ 9 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 pro-interleukin pro-interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 beta beta NOUN NN Number=Sing _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 at at ADP IN _ _ _ _ _ 20 two two NUM CD NumType=Card _ _ _ _ 21 subregions subregion NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 25 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 26 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9725 # text = A region between-3134 and -2729 bp upstream from the transcription site of the human pro-interleukin 1beta (proIL-1beta) gene was identified as an LPS-responsive enhancer element. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 region region NOUN NN Number=Sing _ _ _ _ 3 between between ADP IN _ _ _ _ SpaceAfter=No 4 - - SYM SYM _ _ _ _ SpaceAfter=No 5 3134 3134 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 2729 2729 NUM CD NumType=Card _ _ _ _ 9 bp bp NOUN NN Number=Sing _ _ _ _ 10 upstream upstream NOUN NN Number=Sing _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 pro-interleukin pro-interleukin NOUN NN Number=Sing _ _ _ _ 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 beta beta NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 proIL proil NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 29 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 as as ADP IN _ _ _ _ _ 31 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 35 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 36 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 9726 # text = In this study, the influence of the sequences located between -3134 and -2987 on the transcriptional activity of the proIL-1beta gene in LPS-stimulated Raw 264.7 cells was examined in detail. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 influence influence NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 sequences sequence NOUN NNS Number=Plur _ _ _ _ 10 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 between between ADP IN _ _ _ _ _ 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 3134 3134 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 - - SYM SYM _ _ _ _ SpaceAfter=No 16 2987 2987 NUM CD NumType=Card _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 proIL proil NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 beta beta NOUN NN Number=Sing _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 Raw Raw PROPN NNP Number=Sing _ _ _ _ 33 264.7 264.7 NUM CD NumType=Card _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ _ 35 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 36 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 detail detail NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 9727 # text = The results obtained by transient transfection of fos -CAT constructs that contained serial 5'-deletion mutations showed that the region between -3134 and -3059 appears to be required for the induction of transcription by LPS. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 obtained obtain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 transient transient ADJ JJ Degree=Pos _ _ _ _ 6 transfection transfection NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 fos fo NOUN NNS Number=Plur _ _ _ _ 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 CAT cat NOUN NN Number=Sing _ _ _ _ 11 constructs constructs NOUN NNS Number=Plur _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 contained contain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 serial serial ADJ JJ Degree=Pos _ _ _ _ 15 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 deletion deletion NOUN NN Number=Sing _ _ _ _ 19 mutations mutation NOUN NNS Number=Plur _ _ _ _ 20 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 region region NOUN NN Number=Sing _ _ _ _ 24 between between ADP IN _ _ _ _ _ 25 - - SYM SYM _ _ _ _ SpaceAfter=No 26 3134 3134 NUM CD NumType=Card _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 -3059 -3059 NUM CD NumType=Card _ _ _ _ 29 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 to to PART TO _ _ _ _ _ 31 be be AUX VB VerbForm=Inf _ _ _ _ 32 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 for for ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 induction induction NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 transcription transcription NOUN NN Number=Sing _ _ _ _ 38 by by ADP IN _ _ _ _ _ 39 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 9728 # text = Gel shift assay studies with synthetic oligonucleotides corresponding to partial sequences of the latter region and nuclear extracts from stimulated cells revealed specific protein binding sites between -3110 and -3090 and between -3079 and -3059. 1 Gel gel NOUN NN Number=Sing _ _ _ _ 2 shift shift NOUN NN Number=Sing _ _ _ _ 3 assay assay NOUN NN Number=Sing _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 7 oligonucleotides oligonucleotides NOUN NNS Number=Plur _ _ _ _ 8 corresponding correspond VERB VBG VerbForm=Ger _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 partial partial ADJ JJ Degree=Pos _ _ _ _ 11 sequences sequence NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 latter latter ADJ JJ Degree=Pos _ _ _ _ 15 region region NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 extracts extract NOUN NNS Number=Plur _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 specific specific ADJ JJ Degree=Pos _ _ _ _ 24 protein protein NOUN NN Number=Sing _ _ _ _ 25 binding bind VERB VBG VerbForm=Ger _ _ _ _ 26 sites site NOUN NNS Number=Plur _ _ _ _ 27 between between ADP IN _ _ _ _ _ 28 -3110 -3110 NUM CD NumType=Card _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 -3090 -3090 NUM CD NumType=Card _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 between between ADP IN _ _ _ _ _ 33 -3079 -3079 NUM CD NumType=Card _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 -3059 -3059 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 9729 # text = These specific bindings were time and LPS dose dependent. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 specific specific ADJ JJ Degree=Pos _ _ _ _ 3 bindings bindings NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 time time NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 LPS Lp NOUN NNS Number=Plur _ _ _ _ 8 dose dose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 9730 # text = The results of supershift analysis using specific antibodies against transcription factors suggested that both binding complexes contained the NF-kappaB components p50 and p65, and did not contain other NF-kappaB proteins (p52, c-Rel, Rel B), AP-1 proteins (c-Fos, C-Jun), CREB or C/EBPbeta (NF-IL6). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 supershift supershift ADJ JJ Degree=Pos _ _ _ _ 5 analysis analysis NOUN NN Number=Sing _ _ _ _ 6 using use VERB VBG VerbForm=Ger _ _ _ _ 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 9 against against ADP IN _ _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ _ 12 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 both both ADV RB _ _ _ _ _ 15 binding binding VERB VBG VerbForm=Ger _ _ _ _ 16 complexes complex NOUN NNS Number=Plur _ _ _ _ 17 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 22 components component NOUN NNS Number=Plur _ _ _ _ 23 p50 p50 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 not not PART RB _ _ _ _ _ 30 contain contain VERB VB VerbForm=Inf _ _ _ _ 31 other other ADJ JJ Degree=Pos _ _ _ _ 32 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 35 proteins protein NOUN NNS Number=Plur _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 p52 p52 NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 Rel Rel PROPN NNP Number=Sing _ _ _ _ 44 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT , _ _ _ _ SpaceAfter=No 49 1 1 NUM CD NumType=Card _ _ _ _ 50 proteins protein NOUN NNS Number=Plur _ _ _ _ 51 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 52 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 54 Fos Fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 55 , , PUNCT , _ _ _ _ _ 56 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 59 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 60 , , PUNCT , _ _ _ _ _ 61 CREB CREB PROPN NNP Number=Sing _ _ _ _ 62 or or CCONJ CC _ _ _ _ _ 63 C/EBPbeta C/EBPbeta PROPN NNP Number=Sing _ _ _ _ 64 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 65 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 66 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 67 IL6 IL6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 68 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 69 . . PUNCT . _ _ _ _ _ # sent_id = 9731 # text = Mutation of either of the putative NF-kappaB-binding sites in the enhancer element decreased the LPS-stimulated transcriptional activity. 1 Mutation Mutation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 either either DET DT _ _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 putative putative ADJ JJ Degree=Pos _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 sites site NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 16 element element NOUN NN Number=Sing _ _ _ _ 17 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 LPS Lp NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 9732 # text = These data indicated that two NF-kappaB-binding sites, which are located between -3134 and -3059, are critical for the activation of proIL-1beta gene transcription. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 two two NUM CD NumType=Card _ _ _ _ 6 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 binding bind VERB VBG VerbForm=Ger _ _ _ _ 11 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 between between ADP IN _ _ _ _ _ 17 - - SYM SYM _ _ _ _ SpaceAfter=No 18 3134 3134 NUM CD NumType=Card _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 - - SYM SYM _ _ _ _ SpaceAfter=No 21 3059 3059 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 critical critical ADJ JJ Degree=Pos _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 proIL proil ADV RB _ _ _ _ SpaceAfter=No 30 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 beta beta NOUN NN Number=Sing _ _ _ _ 32 gene gene NOUN NN Number=Sing _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 9733 # text = Copyright 1999 Academic Press. 1 Copyright copyright NOUN NN Number=Sing _ _ _ _ 2 1999 1999 NUM CD NumType=Card _ _ _ _ 3 Academic academic PROPN NNP Number=Sing _ _ _ _ 4 Press. Press. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9734 # text = Document 0030011914 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011914 0030011914 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9735 # text = The T cell activation factor NF-ATc positively regulates HIV-1 replication and gene expression in T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 T T PROPN NNP Number=Sing _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 ATc ATc PROPN NNP Number=Sing _ _ _ _ 9 positively positively ADV RB _ _ _ _ _ 10 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 replication replication NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9736 # text = Clinical deterioration in human immunodeficiency virus type 1 (HIV-1) infection is associated with increased levels of viral replication and burden in the peripheral blood and lymphoid organs. 1 Clinical Clinical ADJ JJ Degree=Pos _ _ _ _ 2 deterioration deterioration NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 type type NOUN NN Number=Sing _ _ _ _ 8 1 1 NUM CD NumType=Card _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 infection infection NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 levels level NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 viral viral ADJ JJ Degree=Pos _ _ _ _ 22 replication replication NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 burden burden NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 28 blood blood NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 31 organs organ NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 9737 # text = T cell activation and ensuing cellular gene activation can be critical for HIV-1 replication. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 ensuing ensue VERB VBG VerbForm=Ger _ _ _ _ 6 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 can can AUX MD VerbForm=Fin _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 critical critical ADJ JJ Degree=Pos _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 9738 # text = The hypothesis that the nuclear factor of activated T cells (NF-AT) may influence HIV-1 replication is therefore compelling given the tight correlation of HIV-1 transcriptional induction to T cell activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 T T PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 may may AUX MD VerbForm=Fin _ _ _ _ 17 influence influence NOUN NN Number=Sing _ _ _ _ 18 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 replication replication NOUN NN Number=Sing _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 therefore therefore ADV RB _ _ _ _ _ 24 compelling compelling ADJ JJ Degree=Pos _ _ _ _ 25 given give VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 tight tight ADJ JJ Degree=Pos _ _ _ _ 28 correlation correlation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ _ 33 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 34 induction induction NOUN NN Number=Sing _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 T T PROPN NNP Number=Sing _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 9739 # text = We report that certain NF-AT(Rel) family members productively bind the kappaB regulatory elements, synergize with NF-kappaB and Tat in transcriptional activation of HIV-1, and enhance HIV-1 replication in T cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 certain certain ADJ JJ Degree=Pos _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 family family NOUN NN Number=Sing _ _ _ _ 12 members member NOUN NNS Number=Plur _ _ _ _ 13 productively productively ADV RB _ _ _ _ _ 14 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 17 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 18 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 synergize synergize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 Tat Tat PROPN NNP Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 enhance enhance NOUN NN Number=Sing _ _ _ _ 37 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ _ 40 replication replication NOUN NN Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 T t PROPN NNP Number=Sing _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 9740 # text = These results link regulatory factors critical to T cell commitment directly to HIV-1 replication. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 link link VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 5 factors factor NOUN NNS Number=Plur _ _ _ _ 6 critical critical ADJ JJ Degree=Pos _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 T t NUM CD NumType=Card _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 commitment commitment NOUN NN Number=Sing _ _ _ _ 11 directly directly ADV RB _ _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9741 # text = Document 0030011921 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011921 0030011921 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9742 # text = Studies into the effect of tyrosine phosphatase inhibitor phenylarsine oxide on NFkappaB activation in T lymphocytes during aging: evidence for altered IkappaB-alpha phosphorylation and degradation. 1 Studies study NOUN NNS Number=Plur _ _ _ _ 2 into into ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effect effect NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 7 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 8 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 9 phenylarsine phenylarsine NOUN NN Number=Sing _ _ _ _ 10 oxide oxide NOUN NN Number=Sing _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 NFkappaB Nfkappab PROPN NNP Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 17 during during ADP IN _ _ _ _ _ 18 aging age NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 : : PUNCT : _ _ _ _ _ 20 evidence evidence NOUN NN Number=Sing _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 altered alter VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 IkappaB Ikappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 alpha alpha NOUN NN Number=Sing _ _ _ _ 26 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9743 # text = Nuclear 1 Nuclear nuclear PROPN NNP Number=Sing _ _ _ _ # sent_id = 9744 # text = Factor kappa B (NFkappaB) is a critical regulator of several genes involved in immune and inflammatory responses. 1 Factor factor NOUN NN Number=Sing _ _ _ _ 2 kappa kappa NOUN NN Number=Sing _ _ _ _ 3 B b PROPN NNP Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 critical critical ADJ JJ Degree=Pos _ _ _ _ 10 regulator regulator NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 several several ADJ JJ Degree=Pos _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 involved involve ADJ JJ Degree=Pos _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 immune immune ADJ JJ Degree=Pos _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 19 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 9745 # text = Treatment of T cells with a variety of stimuli, including TNF-alpha, leads to the translocation of the active p65-50 heterodimer to the nucleus, albeit at a lower level in T cells from the elderly. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 variety variety NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 including include VERB VBG VerbForm=Ger _ _ _ _ 12 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 translocation translocation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 active active ADJ JJ Degree=Pos _ _ _ _ 23 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 50 50 NUM CD NumType=Card _ _ _ _ 26 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 albeit albeit SCONJ IN _ _ _ _ _ 32 at at ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 lower lower ADJ JJR Degree=Cmp _ _ _ _ 35 level level NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 T t PROPN NNP Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ _ 39 from from ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 elderly elderly NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 9746 # text = We demonstrate here that pretreatment with PAO results in the inhibition of NFkappaB induction in TNF-alpha treated T cells, suggesting a role for PAO-sensitive phosphatase in the activation of the NFkappaB via this pathway in human T cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 pretreatment pretreatment NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 PAO pao NOUN NN Number=Sing _ _ _ _ 8 results result NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NFkappaB Nfkappab PROPN NNP Number=Sing _ _ _ _ 14 induction induction NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 alpha alpha ADV RB _ _ _ _ _ 19 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 role role NOUN NN Number=Sing _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 PAO pao PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 30 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 activation activation NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 37 via via ADP IN _ _ _ _ _ 38 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 39 pathway pathway NOUN NN Number=Sing _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 human human ADJ JJ Degree=Pos _ _ _ _ 42 T t PROPN NNP Number=Sing _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 9747 # text = Furthermore, it demonstrates that aging does not influence the sensitivity of this phosphatase. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 4 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 aging age VERB VBG VerbForm=Ger _ _ _ _ 7 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 influence influence VERB VB VerbForm=Inf _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 14 phosphatase phosphatase NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 9748 # text = Treatment with DMP prior to treatment with PAO and TNF abolishes the inhibition induced by PAO, in T cells from both young and old donors, alike. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 DMP DMP PROPN NNP Number=Sing _ _ _ _ 4 prior prior ADJ JJ Degree=Pos _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 treatment treatment VERB VB VerbForm=Inf _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 PAO pao PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 TNF TNF PROPN NNP Number=Sing _ _ _ _ 11 abolishes abolish VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 14 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 PAO pao PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 both both CCONJ CC _ _ _ _ _ 23 young young ADJ JJ Degree=Pos _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 old old ADJ JJ Degree=Pos _ _ _ _ 26 donors donor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 alike alike ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 9749 # text = Finally, we demonstrate that a failure to degrade IkappaB-alpha in cytosols of TNF-treated T cells pretreated with PAO is due to its interference with the phosphorylation of IkappaB-alpha and not due to its inhibitory effect on proteasomal degradation. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 failure failure NOUN NN Number=Sing _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 degrade degrade VERB VB VerbForm=Inf _ _ _ _ 10 IkappaB Ikappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 alpha alpha NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 cytosols cytosol NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 pretreated pretreate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 PAO pao PROPN NNP Number=Sing _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 due due ADP IN _ _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 28 interference interference NOUN NN Number=Sing _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 alpha alpha NOUN NN Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 not not ADV RB _ _ _ _ _ 38 due due ADP IN _ _ _ _ _ 39 to to ADP IN _ _ _ _ _ 40 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 41 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 42 effect effect NOUN NN Number=Sing _ _ _ _ 43 on on ADP IN _ _ _ _ _ 44 proteasomal proteasomal ADJ JJ Degree=Pos _ _ _ _ 45 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 9750 # text = These data collectively suggest that PAO interferes with the phosphorylation and the regulated degradation of IkappaB-alpha, induced by TNF, without affecting the chymotryptic activity of the proteasome, independent of age. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 collectively collectively ADV RB _ _ _ _ _ 4 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 PAO pao PROPN NNP Number=Sing _ _ _ _ 7 interferes interfere VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 degradation degradation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 without without SCONJ IN _ _ _ _ _ 25 affecting affecte VERB VBG VerbForm=Ger _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 chymotryptic chymotryptic ADJ JJ Degree=Pos _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 proteasome proteasome ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 independent independent ADJ JJ Degree=Pos _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 age age NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9751 # text = Document 0030011923 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011923 0030011923 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9752 # text = Defining therapeutic targets by using adenovirus: 1 Defining defining VERB VBG VerbForm=Ger _ _ _ _ 2 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 3 targets target NOUN NNS Number=Plur _ _ _ _ 4 by by SCONJ IN _ _ _ _ _ 5 using use VERB VBG VerbForm=Ger _ _ _ _ 6 adenovirus adenovirus NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 : : PUNCT : _ _ _ _ _ # sent_id = 9753 # text = blocking NF-kappaB inhibits both inflammatory and destructive mechanisms in rheumatoid synovium but spares anti-inflammatory mediators. 1 blocking block VERB VBG VerbForm=Ger _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 5 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 6 both both CCONJ CC _ _ _ _ _ 7 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 destructive destructive ADJ JJ Degree=Pos _ _ _ _ 10 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 rheumatoid rheumatoid ADJ JJ Degree=Pos _ _ _ _ 13 synovium synovium NOUN NN Number=Sing _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 spares spare VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 17 mediators mediator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9754 # text = The role of the transcription factor NF-kappaB in the pathogenesis of rheumatoid arthritis has long been a subject of controversy. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 rheumatoid rheumatoid ADJ JJ Degree=Pos _ _ _ _ 15 arthritis arthritis NOUN NN Number=Sing _ _ _ _ 16 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 long long ADV RB Degree=Pos _ _ _ _ 18 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 subject subject NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 controversy controversy NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 9755 # text = We used an adenoviral technique of blocking NF-kappaB through overexpression of the inhibitory subunit IkappaBalpha, which has the advantage that it can be used in the diseased tissue itself, with >90% of the synovial macrophages, fibroblasts, and T cells infected. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 adenoviral adenoviral ADJ JJ Degree=Pos _ _ _ _ 5 technique technique NOUN NN Number=Sing _ _ _ _ 6 of of SCONJ IN _ _ _ _ _ 7 blocking blocke VERB VBG VerbForm=Ger _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 11 through through ADP IN _ _ _ _ _ 12 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 16 subunit subunit NOUN NN Number=Sing _ _ _ _ 17 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 advantage advantage NOUN NN Number=Sing _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 25 can can AUX MD VerbForm=Fin _ _ _ _ 26 be be AUX VB VerbForm=Inf _ _ _ _ 27 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 diseased diseased VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 tissue tissue NOUN NN Number=Sing _ _ _ _ 32 itself itself PRON PRP Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 > > SYM NFP _ _ _ _ SpaceAfter=No 36 90 90 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 % % SYM NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 synovial synovial ADJ JJ Degree=Pos _ _ _ _ 41 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 T t PROPN NNP Number=Sing _ _ _ _ 47 cells cell NOUN NNS Number=Plur _ _ _ _ 48 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 9756 # text = We found that the spontaneous production of tumor necrosis factor alpha and other pro-inflammatory cytokines is NF-kappaB-dependent in rheumatoid synovial tissue, in contrast to the main anti-inflammatory mediators, like IL-10 and -11, and the IL-1 receptor antagonist. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 spontaneous spontaneous ADJ JJ Degree=Pos _ _ _ _ 6 production production NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 tumor tumor NOUN NN Number=Sing _ _ _ _ 9 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 other other ADJ JJ Degree=Pos _ _ _ _ 14 pro-inflammatory pro-inflammatory ADJ JJ Degree=Pos _ _ _ _ 15 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 rheumatoid rheumatoid ADJ JJ Degree=Pos _ _ _ _ 24 synovial synovial ADJ JJ Degree=Pos _ _ _ _ 25 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 contrast contrast NOUN NN Number=Sing _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 main main ADJ JJ Degree=Pos _ _ _ _ 32 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 33 mediators mediator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 like like ADP IN _ _ _ _ _ 36 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT , _ _ _ _ SpaceAfter=No 38 10 10 NUM CD NumType=Card _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 -11 -11 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT , _ _ _ _ SpaceAfter=No 46 1 1 NUM CD NumType=Card _ _ _ _ 47 receptor receptor NOUN NN Number=Sing _ _ _ _ 48 antagonist antagonist NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 9757 # text = Of even more interest, IkappaBalpha overexpression inhibited the production of matrix metalloproteinases 1 and 3 while not affecting their tissue inhibitor. 1 Of of ADP IN _ _ _ _ _ 2 even even ADV RB _ _ _ _ _ 3 more more ADJ JJR Degree=Cmp _ _ _ _ 4 interest interest NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 7 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 8 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 production production NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 matrix matrix NUM CD NumType=Card _ _ _ _ 13 metalloproteinases metalloproteinase NOUN NNS Number=Plur _ _ _ _ 14 1 1 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 3 3 NUM CD NumType=Card _ _ _ _ 17 while while SCONJ IN _ _ _ _ _ 18 not not ADV RB _ _ _ _ _ 19 affecting affect VERB VBG VerbForm=Ger _ _ _ _ 20 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 tissue tissue NOUN NN Number=Sing _ _ _ _ 22 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 9758 # text = Blocking NF-kappaB in the rheumatoid joint thus has a very beneficial profile, reducing both the inflammatory response and the tissue destruction. 1 Blocking Blocke VERB VBG VerbForm=Ger _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 rheumatoid rheumatoid ADJ JJ Degree=Pos _ _ _ _ 8 joint joint NOUN NN Number=Sing _ _ _ _ 9 thus thus ADV RB _ _ _ _ _ 10 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 very very ADV RB _ _ _ _ _ 13 beneficial beneficial ADJ JJ Degree=Pos _ _ _ _ 14 profile profile NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 reducing reduce VERB VBG VerbForm=Ger _ _ _ _ 17 both both CCONJ CC _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 20 response response NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 tissue tissue ADJ JJ Degree=Pos _ _ _ _ 24 destruction destruction NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 9759 # text = The adenoviral technique described here has widespread applicability, allowing rapid testing of the effects of blocking a potential therapeutic target in either cultures of normal cells or in the diseased tissue itself. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 adenoviral adenoviral ADJ JJ Degree=Pos _ _ _ _ 3 technique technique NOUN NN Number=Sing _ _ _ _ 4 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 here here ADV RB PronType=Dem _ _ _ _ 6 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 widespread widespread ADJ JJ Degree=Pos _ _ _ _ 8 applicability applicability NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 allowing allow VERB VBG VerbForm=Ger _ _ _ _ 11 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 12 testing testing NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 effects effect NOUN NNS Number=Plur _ _ _ _ 16 of of SCONJ IN _ _ _ _ _ 17 blocking block VERB VBG VerbForm=Ger _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 potential potential ADJ JJ Degree=Pos _ _ _ _ 20 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 21 target target NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 either either DET DT _ _ _ _ _ 24 cultures culture NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 normal normal ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 diseased disease ADJ JJ Degree=Pos _ _ _ _ 32 tissue tissue NOUN NN Number=Sing _ _ _ _ 33 itself itself PRON PRP Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9760 # text = Document 0030011927 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011927 0030011927 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9761 # text = The control of lytic replication of Epstein-Barr virus in B lymphocytes (Review). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 control control NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 5 replication replication NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Barr Barr PROPN NNP Number=Sing _ _ _ _ 10 virus virus NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 B b ADJ JJ Degree=Pos _ _ _ _ 13 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 Review Review NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9762 # text = Uncontrolled replication of a virus, which is harmful to the host is also disadvantageous to the virus. 1 Uncontrolled Uncontroll VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 replication replication NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 harmful harmful ADJ JJ Degree=Pos _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 host host NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 disadvantageous disadvantageous ADJ JJ Degree=Pos _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 9763 # text = Most viruses cannot compete with the various immune mechanisms and become eliminated in the course of infection. 1 Most most ADJ JJS Degree=Sup _ _ _ _ 2 viruses viruse NOUN NNS Number=Plur _ _ _ _ 3 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 4 not not PART RB _ _ _ _ _ 5 compete compete VERB VB VerbForm=Inf _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 various various ADJ JJ Degree=Pos _ _ _ _ 9 immune immune ADJ JJ Degree=Pos _ _ _ _ 10 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 become become VERB VB VerbForm=Inf _ _ _ _ 13 eliminated eliminated ADJ JJ Degree=Pos _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 course course NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 9764 # text = Therefore, only the time between infection and eradication remains for these viruses to proliferate. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 only only ADV RB _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 time time NOUN NN Number=Sing _ _ _ _ 6 between between ADP IN _ _ _ _ _ 7 infection infection NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 eradication eradication NOUN NN Number=Sing _ _ _ _ 10 remains remain NOUN NNS Number=Plur _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 13 viruses viruse NOUN NNS Number=Plur _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 proliferate proliferate VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 9765 # text = A few viruses, like the Herpesviruses or the papillomaviruses, however, have developed a sophisticated strategy for persisting lifelong, usually asymptomatically in the host, hiding from the immune system and producing infectious progeny at the same time. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 few few ADJ JJ Degree=Pos _ _ _ _ 3 viruses viruse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 like like ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 Herpesviruses Herpesviruse NOUN NNS Number=Plur _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 papillomaviruses papillomaviruse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 however however ADV RB _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 developed develop VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 sophisticated sophisticate ADJ JJ Degree=Pos _ _ _ _ 18 strategy strategy NOUN NN Number=Sing _ _ _ _ 19 for for SCONJ IN _ _ _ _ _ 20 persisting persist VERB VBG VerbForm=Ger _ _ _ _ 21 lifelong lifelong ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 usually usually ADV RB _ _ _ _ _ 24 asymptomatically asymptomatically ADV RB _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 host host NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 hiding hide VERB VBG VerbForm=Ger _ _ _ _ 30 from from ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 immune immune ADJ JJ Degree=Pos _ _ _ _ 33 system system NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 producing produce VERB VBG VerbForm=Ger _ _ _ _ 36 infectious infectious ADJ JJ Degree=Pos _ _ _ _ 37 progeny progeny NOUN NN Number=Sing _ _ _ _ 38 at at ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 same same ADJ JJ Degree=Pos _ _ _ _ 41 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 9766 # text = This strategy depends on a separation of latency and the lytic replication, either by time due to differentiation-dependent mechanisms or by spatial separation as the result of different host cell types. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 strategy strategy NOUN NN Number=Sing _ _ _ _ 3 depends depend VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 separation separation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 latency latency NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 12 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 either either CCONJ CC _ _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 time time NOUN NN Number=Sing _ _ _ _ 17 due due ADP IN _ _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 22 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 spatial spatial ADJ JJ Degree=Pos _ _ _ _ 26 separation separation NOUN NN Number=Sing _ _ _ _ 27 as as ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 result result NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 different different ADJ JJ Degree=Pos _ _ _ _ 32 host host NOUN NN Number=Sing _ _ _ _ 33 cell cell NOUN NN Number=Sing _ _ _ _ 34 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 9767 # text = Both are true for the Epstein-Barr virus (EBV). 1 Both both DET DT _ _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 true true ADJ JJ Degree=Pos _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 Barr Barr PROPN NNP Number=Sing _ _ _ _ 9 virus virus NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 9768 # text = B cells and epithelial cells have a pivotal role in the life cycle of the virus. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 pivotal pivotal ADJ JJ Degree=Pos _ _ _ _ 9 role role NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 life life NOUN NN Number=Sing _ _ _ _ 13 cycle cycle NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 9769 # text = The former can become latently infected and are thought to be the virus reservoir in vivo, whereas the latter were shown to be permissive for lytic replication. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 former former NOUN NN Number=Sing _ _ _ _ 3 can can AUX MD VerbForm=Fin _ _ _ _ 4 become become VERB VB VerbForm=Inf _ _ _ _ 5 latently latently ADV RB _ _ _ _ _ 6 infected infect ADJ JJ Degree=Pos _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 virus virus NOUN NN Number=Sing _ _ _ _ 14 reservoir reservoir NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 whereas whereas SCONJ IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 latter latter ADJ JJ Degree=Pos _ _ _ _ 21 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 be be AUX VB VerbForm=Inf _ _ _ _ 25 permissive permissive ADJ JJ Degree=Pos _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 28 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 9770 # text = However, replication of EBV in vivo is controlled primarily by host immune mechanisms selecting for cells that are not permissive for viral replication as the result of a particular set of transcription factors. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 replication replication NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 EBV EBV PROPN NNP Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 vivo vivo PROPN NNP Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 primarily primarily ADV RB _ _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 host host NOUN NN Number=Sing _ _ _ _ 13 immune immune VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 15 selecting selecte VERB VBG VerbForm=Ger _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 permissive permissive ADJ JJ Degree=Pos _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 viral viral ADJ JJ Degree=Pos _ _ _ _ 24 replication replication NOUN NN Number=Sing _ _ _ _ 25 as as ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 result result NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 particular particular ADJ JJ Degree=Pos _ _ _ _ 31 set set NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 9771 # text = These factors control the activity of the regulatory immediate-early genes and, in addition, lytic and latent cycle regulatory genes negatively interfere with each other and thus link cellular and viral gene regulatory mechanisms. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 control control VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 9 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 early early ADJ JJ Degree=Pos _ _ _ _ 12 genes gene NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 latent latent ADJ JJ Degree=Pos _ _ _ _ 21 cycle cycle NOUN NN Number=Sing _ _ _ _ 22 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 23 genes gene NOUN NNS Number=Plur _ _ _ _ 24 negatively negatively ADV RB _ _ _ _ _ 25 interfere interfere ADV RB PronType=Dem _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 each each DET DT _ _ _ _ _ 28 other other ADJ JJ Degree=Pos _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 thus thus ADV RB _ _ _ _ _ 31 link link NOUN NN Number=Sing _ _ _ _ 32 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 viral viral ADJ JJ Degree=Pos _ _ _ _ 35 gene gene NOUN NN Number=Sing _ _ _ _ 36 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 37 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 9772 # text = Disturbance of both the immune surveillance as well as viral gene regulation may result in EBV-associated disease. 1 Disturbance Disturbance NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 both both CCONJ CC _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 immune immune ADJ JJ Degree=Pos _ _ _ _ 6 surveillance surveillance NOUN NN Number=Sing _ _ _ _ 7 as as ADV RB _ _ _ _ _ 8 well well ADV RB Degree=Pos _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 viral viral ADJ JJ Degree=Pos _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 regulation regulation NOUN NN Number=Sing _ _ _ _ 13 may may AUX MD VerbForm=Fin _ _ _ _ 14 result result VERB VB VerbForm=Inf _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9773 # text = Document 0030011933 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011933 0030011933 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9774 # text = Identification of a region which directs the monocytic activity of the colony-stimulating factor 1 (macrophage colony-stimulating factor) receptor promoter and binds PEBP2/CBF (AML1). 1 Identification identification NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 region region NOUN NN Number=Sing _ _ _ _ 5 which which PRON WDT PronType=Rel _ _ _ _ 6 directs direct VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 1 1 NUM CD NumType=Card _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 19 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 receptor receptor NOUN NN Number=Sing _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 binds bind NOUN NNS Number=Plur _ _ _ _ 28 PEBP2/ PEBP2/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 29 CBF CBF PROPN NNP Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 AML1 AML1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9775 # text = The receptor for the macrophage colony-stimulating factor (or colony-stimulating factor 1 [CSF-1]) is expressed from different promoters in monocytic cells and placental trophoblasts. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 6 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 stimulating stimulating NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 or or CCONJ CC _ _ _ _ _ 12 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 1 1 NUM CD NumType=Card _ _ _ _ 17 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 CSF CSF NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 from from ADP IN _ _ _ _ _ 26 different different ADJ JJ Degree=Pos _ _ _ _ 27 promoters promoter NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 placental placental ADJ JJ Degree=Pos _ _ _ _ 33 trophoblasts trophoblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 9776 # text = We have demonstrated that the monocyte-specific expression of the CSF-1 receptor is regulated at the level of transcription by a tissue-specific promoter whose activity is stimulated by the monocyte/B-cell-specific transcription factor PU.1 (D.-E.Zhang, C.J.Hetherington, H.-M.Chen, and D.G.Tenen, Mol.Cell. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 monocyte- monocyte- SYM NFP _ _ _ _ SpaceAfter=No 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 at at ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 level level NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 specific specific ADJ JJ Degree=Pos _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ _ 28 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 29 activity activity NOUN NN Number=Sing _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 monocyte/B-cell monocyte/B-cell ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 specific specific ADJ JJ Degree=Pos _ _ _ _ 37 transcription transcription NOUN NN Number=Sing _ _ _ _ 38 factor factor NOUN NN Number=Sing _ _ _ _ 39 PU.1 Pu.1 PROPN NNP Number=Sing _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 D. D. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 E.Zhang E.Zhang PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 C.J.Hetherington C.J.Hetherington PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 H.-M. H.-M. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 Chen Chen PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 D.G.Tenen D.G.Tenen PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 Mol.Cell Mol.Cell PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 9777 # text = Biol.14:373-381, 1994). 1 Biol.14:373-381 Biol.14:373-381 NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 1994 1994 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 5 . . PUNCT . _ _ _ _ _ # sent_id = 9778 # text = Here we report that the tissue specificity of this promoter is also mediated by sequences in a region II (bp -88 to - 59), which lies 10 bp upstream from the PU.1-binding site. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 tissue tissue NOUN NN Number=Sing _ _ _ _ 7 specificity specificity NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 also also ADV RB _ _ _ _ _ 13 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 sequences sequence NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 region region NOUN NN Number=Sing _ _ _ _ 19 II ii NUM CD NumType=Card _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 bp bp NOUN NN Number=Sing _ _ _ _ 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 88 88 NUM CD NumType=Card _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 - - SYM SYM _ _ _ _ _ 26 59 59 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 which which PRON WDT PronType=Rel _ _ _ _ 30 lies lie VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 10 10 NUM CD NumType=Card _ _ _ _ 32 bp bp NOUN NN Number=Sing _ _ _ _ 33 upstream upstream NOUN NN Number=Sing _ _ _ _ 34 from from ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 binding binding VERB VBG VerbForm=Ger _ _ _ _ 39 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 9779 # text = When analyzed by DNase footprinting, region II was protected preferentially in monocytic cells. 1 When when ADV WRB PronType=Int _ _ _ _ 2 analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 DNase DNase NOUN NN Number=Sing _ _ _ _ 5 footprinting footprinting NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 region region NOUN NN Number=Sing _ _ _ _ 8 II ii PRON PRP _ _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 protected protect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 preferentially preferentially ADV RB _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 9780 # text = Electrophoretic mobility shift assays confirmed that region II interacts specifically with nuclear proteins from monocytic cells. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 assays assays NOUN NNS Number=Plur _ _ _ _ 5 confirmed confirm VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 region region NOUN NN Number=Sing _ _ _ _ 8 II ii NUM CD NumType=Card _ _ _ _ 9 interacts interact NOUN NNS Number=Plur _ _ _ _ 10 specifically specifically ADV RB _ _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 proteins protein NOUN NNS Number=Plur _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 9781 # text = Two gel shift complexes (Mono A and Mono B) were formed with separate sequence elements within this region. 1 Two two NUM CD NumType=Card _ _ _ _ 2 gel gel NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 complexes complex NOUN NNS Number=Plur _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 Mono Mono PROPN NNP Number=Sing _ _ _ _ 7 A A PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 Mono Mono PROPN NNP Number=Sing _ _ _ _ 10 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 formed form VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 separate separate ADJ JJ Degree=Pos _ _ _ _ 16 sequence sequence NOUN NN Number=Sing _ _ _ _ 17 elements element NOUN NNS Number=Plur _ _ _ _ 18 within within ADP IN _ _ _ _ _ 19 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 20 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 9782 # text = Competition and supershift experiments indicate that Mono B contains a member of the polyomavirus enhancer-binding protein 2/core-binding factor (PEBP2/CBF) family, which includes the AML1 gene product, while Mono A is a distinct complex preferentially expressed in monocytic cells. 1 Competition competition NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 supershift supershift ADJ JJ Degree=Pos _ _ _ _ 4 experiments experiment NOUN NNS Number=Plur _ _ _ _ 5 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 Mono Mono PROPN NNP Number=Sing _ _ _ _ 8 B b PROPN NNP Number=Sing _ _ _ _ 9 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 member member NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 polyomavirus polyomavirus NOUN NN Number=Sing _ _ _ _ 15 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 binding binding VERB VBG VerbForm=Ger _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 21 core core NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 binding binding VERB VBG VerbForm=Ger _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 PEBP2/ PEBP2ith NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 CBF CBF NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 which which PRON WDT PronType=Rel _ _ _ _ 32 includes include VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 AML1 Aml1 PROPN NNP Number=Sing _ _ _ _ 35 gene gene NOUN NN Number=Sing _ _ _ _ 36 product product NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 while while SCONJ IN _ _ _ _ _ 39 Mo mo PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 no no DET DT _ _ _ _ _ 41 A a NOUN NN Number=Sing _ _ _ _ 42 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 43 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 44 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 45 complex complex NOUN NN Number=Sing _ _ _ _ 46 preferentially preferentially ADV RB _ _ _ _ _ 47 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 50 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 9783 # text = Promoter constructs with mutations in these sequence elements were no longer expressed specifically in monocytes. 1 Promoter Promoter NOUN NN Number=Sing _ _ _ _ 2 constructs construct VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 mutations mutation NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 sequence sequence NOUN NN Number=Sing _ _ _ _ 8 elements element NOUN NNS Number=Plur _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 no no ADV RB _ _ _ _ _ 11 longer longer ADV RBR Degree=Cmp _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 specifically specifically ADV RB _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 9784 # text = Furthermore, multimerized region II sequence elements enhanced the activity of a heterologous thymidine kinase promoter in monocytic cells but not other cell types tested. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 multimerized multimerize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 region region NOUN NN Number=Sing _ _ _ _ 5 II ii NUM CD NumType=Card _ _ _ _ 6 sequence sequence NOUN NN Number=Sing _ _ _ _ 7 elements element NOUN NNS Number=Plur _ _ _ _ 8 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 14 thymidine thymidine NOUN NN Number=Sing _ _ _ _ 15 kinase kinase NOUN NN Number=Sing _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 other other ADJ JJ Degree=Pos _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 types type NOUN NNS Number=Plur _ _ _ _ 25 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 9785 # text = These results indicate that the monocyte/B-cell-specific transcription factor PU.1 and the Mono A and Mono B protein complexes act in concert to regulate monocyte-specific transcription of the CSF-1 receptor. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 monocyte/B-cell monocyte/B-cell ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 Mono Mono PROPN NNP Number=Sing _ _ _ _ 15 A a PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 Mono Mono PROPN NNP Number=Sing _ _ _ _ 18 B b PROPN NNP Number=Sing _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 complexes complex NOUN NNS Number=Plur _ _ _ _ 21 act act VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 concert concert NOUN NN Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 26 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 specific specific ADJ JJ Degree=Pos _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 CSF CSF NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ _ 35 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9786 # text = Document 0030011936 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011936 0030011936 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9787 # text = IL-10 cooperates with TNF-alpha to activate HIV-1 from latently and acutely infected cells of monocyte/macrophage lineage. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 cooperates cooperate NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 alpha alpha NOUN NN Number=Sing _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 activate activate VERB VB VerbForm=Inf _ _ _ _ 11 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 latently latently ADV RB _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 acutely acutely ADV RB _ _ _ _ _ 18 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 / / PUNCT , _ _ _ _ SpaceAfter=No 23 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 24 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9788 # text = IL-10 is elevated in HIV-1-infected individuals and has been implicated in disease progression. 1 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 elevated elevate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 -infected -infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 individuals individual NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 15 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 disease disease NOUN NN Number=Sing _ _ _ _ 18 progression progression NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 9789 # text = In this study, we investigated the effects of IL-10 on the activation of HIV-1 from infected monocytes and macrophages. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 effects effect NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 10 10 NUM CD NumType=Card _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 infected infect ADJ JJ Degree=Pos _ _ _ _ 22 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 9790 # text = Although IL-10 alone did not induce HIV-1 replication, in the presence of TNF-alpha, IL-10 markedly enhanced virion production from a chronically infected promonocytic cell line (U1) and in acutely infected monocyte-derived macrophages. 1 Although although SCONJ IN _ _ _ _ _ 2 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - SYM SYM _ _ _ _ SpaceAfter=No 4 10 10 NUM CD NumType=Card _ _ _ _ 5 alone alone ADV RB _ _ _ _ _ 6 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 induce induce VERB VB VerbForm=Inf _ _ _ _ 9 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 presence presence NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 IL il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - SYM SYM _ _ _ _ SpaceAfter=No 24 10 10 NUM CD NumType=Card _ _ _ _ 25 markedly markedly ADV RB _ _ _ _ _ 26 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 virion virion NOUN NN Number=Sing _ _ _ _ 28 production production NOUN NN Number=Sing _ _ _ _ 29 from from ADP IN _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 chronically chronically ADV RB _ _ _ _ _ 32 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 line line NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 U1 U1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 acutely acutely ADV RB _ _ _ _ _ 42 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 9791 # text = Neutralizing mAbs to IL-10 and TNF-alpha indicated that both cytokines were essential for the induction and were required to generate a synergistic increase in virus expression. 1 Neutralizing Neutralize ADJ JJ Degree=Pos _ _ _ _ 2 mAbs mAb NOUN NNS Number=Plur _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 10 10 NUM CD NumType=Card _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 both both DET DT _ _ _ _ _ 14 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 essential essential ADJ JJ Degree=Pos _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 induction induction NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 generate generate VERB VB VerbForm=Inf _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 27 increase increase NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 virus virus NOUN NN Number=Sing _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 9792 # text = The effects of the two cytokines were distinguishable functionally since pretreatment with TNF-alpha attenuated the cytokine cooperativity, while pretreatment with IL-10 potentiated their cooperativity, suggesting that IL-10 and TNF-alpha play different roles in the activation of virus. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 two two NUM CD NumType=Card _ _ _ _ 6 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 distinguishable distinguishable ADJ JJ Degree=Pos _ _ _ _ 9 functionally functionally ADV RB _ _ _ _ _ 10 since since ADP IN _ _ _ _ _ 11 pretreatment pretreatment NOUN NN Number=Sing _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 alpha alpha X FW Foreign=Yes _ _ _ _ 16 attenuated attenuate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 19 cooperativity cooperativity NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 while while SCONJ IN _ _ _ _ _ 22 pretreatment pretreatment NOUN NN Number=Sing _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 10 10 NUM CD NumType=Card _ _ _ _ 27 potentiated potentiate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 29 cooperativity cooperativity NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 32 that that SCONJ IN _ _ _ _ _ 33 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - SYM SYM _ _ _ _ SpaceAfter=No 35 10 10 NUM CD NumType=Card _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 alpha alpha NOUN NN Number=Sing _ _ _ _ 40 play play NOUN NN Number=Sing _ _ _ _ 41 different different ADJ JJ Degree=Pos _ _ _ _ 42 roles role NOUN NNS Number=Plur _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 activation activation NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 9793 # text = Northern blot analysis as well as Ab blocking and cytokine secretion studies indicated that the induction of either endogenous TNF-alpha or IL-10 was not involved in the cooperativity, nor was an up-regulation of TNF-alpha receptors. 1 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 as as ADV RB _ _ _ _ _ 5 well well ADV RB Degree=Pos _ _ _ _ 6 as as ADP IN _ _ _ _ _ 7 Ab Ab PROPN NNP Number=Sing _ _ _ _ 8 blocking block VERB VBG VerbForm=Ger _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 cytokine cytokine VERB VB VerbForm=Inf _ _ _ _ 11 secretion secretion NOUN NN Number=Sing _ _ _ _ 12 studies study NOUN NNS Number=Plur _ _ _ _ 13 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 either either CCONJ CC _ _ _ _ _ 19 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 20 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 alpha alpha NOUN NN Number=Sing _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 10 10 NUM CD NumType=Card _ _ _ _ 27 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 28 not not PART RB _ _ _ _ _ 29 involved involved ADJ JJ Degree=Pos _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 cooperativity cooperativity NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 nor nor CCONJ CC _ _ _ _ _ 35 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 36 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 regulation regulation NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 alpha alpha NOUN NN Number=Sing _ _ _ _ 44 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 9794 # text = In combination with TNF-alpha, IL-10 stimulated activating protein-1 (AP-1) and nuclear factor (NF)-kappa B binding activities and cooperated to increase HIV-1 steady-state mRNA levels and enhance long terminal repeat-directed transcription through activation of the NF-kappa B binding sites, suggesting the IL-10 effect occurs at least in part at the transcriptional level. 1 In in ADP IN _ _ _ _ _ 2 combination combination NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 10 10 NUM CD NumType=Card _ _ _ _ 11 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 activating activating VERB VBG VerbForm=Ger _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 X LS _ _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 binding bind VERB VBG VerbForm=Ger _ _ _ _ 31 activities activity NOUN NNS Number=Plur _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 cooperated cooperate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 to to PART TO _ _ _ _ _ 35 increase increase VERB VB VerbForm=Inf _ _ _ _ 36 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 1 1 NUM CD NumType=Card _ _ _ _ 39 steady steady NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 state state NOUN NN Number=Sing _ _ _ _ 42 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 43 levels level NOUN NNS Number=Plur _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 46 long long ADV RB Degree=Pos _ _ _ _ 47 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 48 repeat repeat VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 51 transcription transcription NOUN NN Number=Sing _ _ _ _ 52 through through ADP IN _ _ _ _ _ 53 activation activation NOUN NN Number=Sing _ _ _ _ 54 of of ADP IN _ _ _ _ _ 55 the the DET DT Definite=Def|PronType=Art _ _ _ _ 56 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 kappa kappa NOUN NN Number=Sing _ _ _ _ 59 B b NOUN NN Number=Sing _ _ _ _ 60 binding binding VERB VBG VerbForm=Ger _ _ _ _ 61 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 62 , , PUNCT , _ _ _ _ _ 63 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 64 the the DET DT Definite=Def|PronType=Art _ _ _ _ 65 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 66 - - PUNCT , _ _ _ _ SpaceAfter=No 67 10 10 NUM CD NumType=Card _ _ _ _ 68 effect effect NOUN NN Number=Sing _ _ _ _ 69 occurs occur NOUN NNS Number=Plur _ _ _ _ 70 at at ADV RB _ _ _ _ _ 71 least least ADV RBS Degree=Sup _ _ _ _ 72 in in ADP IN _ _ _ _ _ 73 part part NOUN NN Number=Sing _ _ _ _ 74 at at ADP IN _ _ _ _ _ 75 the the DET DT Definite=Def|PronType=Art _ _ _ _ 76 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 77 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 78 . . PUNCT . _ _ _ _ _ # sent_id = 9795 # text = These results indicate that IL-10, in addition to down-regulating the cellular immune response to HIV-1, may also play a role in TNF-alpha-mediated activation of HIV-1 replication in the monocyte/macrophage lineage. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 addition addition NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 down down ADV RB _ _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 17 immune immune ADJ JJ Degree=Pos _ _ _ _ 18 response response NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 may may AUX MD VerbForm=Fin _ _ _ _ 25 also also ADV RB _ _ _ _ _ 26 play play VERB VB VerbForm=Inf _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 role role NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 activation activation NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ _ 40 replication replication NOUN NN Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 / / PUNCT , _ _ _ _ SpaceAfter=No 45 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 46 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9796 # text = Document 0030011937 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011937 0030011937 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9797 # text = Transcriptional repression of the interleukin-2 gene by vitamin D3: direct inhibition of NFATp/AP-1 complex formation by a nuclear hormone receptor. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 repression repression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 vitamin vitamin NOUN NN Number=Sing _ _ _ _ 11 D3 D3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 : : PUNCT : _ _ _ _ _ 13 direct direct ADJ JJ Degree=Pos _ _ _ _ 14 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 NFATp NFATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 complex complex NOUN NN Number=Sing _ _ _ _ 22 formation formation NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 26 hormone hormone NOUN NN Number=Sing _ _ _ _ 27 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9798 # text = T-lymphocyte proliferation is suppressed by 1,25-dihydroxyvitamin D3 [1,25(OH)2D3], the active metabolite of vitamin D3, and is associated with a decrease in interleukin 2 (IL-2), gamma interferon, and granulocyte-macrophage colony-stimulating factor mRNA levels. 1 T- T- SYM NFP _ _ _ _ SpaceAfter=No 2 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 3 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 dihydroxyvitamin dihydroxyvitamin NOUN NN Number=Sing _ _ _ _ 10 D3 D3 NOUN NN Number=Sing _ _ _ _ 11 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 OH oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 2D3 2D3 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 active active ADJ JJ Degree=Pos _ _ _ _ 21 metabolite metabolite NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 vitamin vitamin ADJ JJ Degree=Pos _ _ _ _ 24 D3 D3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 decrease decrease NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 34 2 2 NUM CD NumType=Card _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 gamma gamma NOUN NN Number=Sing _ _ _ _ 42 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 48 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 stimulating stimulate VERB VBG VerbForm=Ger _ _ _ _ 51 factor factor NOUN NN Number=Sing _ _ _ _ 52 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 53 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 9799 # text = We report here that 1,25(OH)2D3-mediated repression in Jurkat cells is cycloheximide resistant, suggesting that it is a direct transcriptional repressive effect on IL-2 expression by the vitamin D3 receptor (VDR). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 OH oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 2D3 2D3 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 repression repression NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ _ 18 resistant resistant NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 direct direct ADJ JJ Degree=Pos _ _ _ _ 26 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 27 repressive repressive ADJ JJ Degree=Pos _ _ _ _ 28 effect effect NOUN NN Number=Sing _ _ _ _ 29 on on ADP IN _ _ _ _ _ 30 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 2 2 NUM CD NumType=Card _ _ _ _ 33 expression expression NOUN NN Number=Sing _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 vitamin vitamin ADJ JJ Degree=Pos _ _ _ _ 37 D3 D3 NOUN NN Number=Sing _ _ _ _ 38 receptor receptor NOUN NN Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 VDR VDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 9800 # text = We therefore examined vitamin D3-mediated repression of activated IL-2 expression by cotransfecting Jurkat cells with IL-2 promoter/reporter constructs and a VDR overexpression vector and by DNA binding. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 therefore therefore ADV RB _ _ _ _ _ 3 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 vitamin vitamin NOUN NNS Number=Plur _ _ _ _ 5 D3 D3 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 repression repression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 by by SCONJ IN _ _ _ _ _ 16 cotransfecting cotransfect VERB VBG VerbForm=Ger _ _ _ _ 17 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 / / PUNCT , _ _ _ _ SpaceAfter=No 25 reporter reporter NOUN NN Number=Sing _ _ _ _ 26 constructs construct NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 VDR VDR ADJ JJR Degree=Cmp _ _ _ _ 30 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 31 vector vector NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 by by SCONJ IN _ _ _ _ _ 34 DNA dna NOUN NN Number=Sing _ _ _ _ 35 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 9801 # text = We delineated an element conferring both DNA binding by the receptor in vitro and 1,25(OH)2D3-mediated repression in vivo to a short 40-bp region encompassing an important positive regulatory element, NF-AT-1, which is bound by a T-cell-specific transcription factor, NFATp, as well as by AP-1. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 delineated delineate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 element element NOUN NN Number=Sing _ _ _ _ 5 conferring conferr VERB VBG VerbForm=Ger _ _ _ _ 6 both both DET DT _ _ _ _ _ 7 DNA dna NOUN NN Number=Sing _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 vitro vitro NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 OH Oh NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 2D3 2D3 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 repression repression NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 vivo vivo NOUN NN Number=Sing _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 short short ADJ JJ Degree=Pos _ _ _ _ 28 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 bp bp NOUN NN Number=Sing _ _ _ _ 31 region region NOUN NN Number=Sing _ _ _ _ 32 encompassing encompasse VERB VBG VerbForm=Ger _ _ _ _ 33 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 important important ADJ JJ Degree=Pos _ _ _ _ 35 positive positive ADJ JJ Degree=Pos _ _ _ _ 36 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 37 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 which which PRON WDT PronType=Rel _ _ _ _ 46 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 47 bound bound ADJ JJ Degree=Pos _ _ _ _ 48 by by ADP IN _ _ _ _ _ 49 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 50 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 specific specific ADJ JJ Degree=Pos _ _ _ _ 54 transcription transcription NOUN NN Number=Sing _ _ _ _ 55 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 , , PUNCT , _ _ _ _ _ 57 NFATp NFATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 58 , , PUNCT , _ _ _ _ _ 59 as as ADV RB _ _ _ _ _ 60 well well ADV RB Degree=Pos _ _ _ _ 61 as as ADP IN _ _ _ _ _ 62 by by ADP IN _ _ _ _ _ 63 AP Ap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 64 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 65 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 66 . . PUNCT . _ _ _ _ _ # sent_id = 9802 # text = VDR DNA-binding mutants were unable to either bind to this element in vitro or repress in vivo; the VDR DNA-binding domain alone, however, bound the element but also could not repress IL-2 expression. 1 VDR VDR VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 mutants mutant NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 unable unable ADJ JJ Degree=Pos _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 either either CCONJ CC _ _ _ _ _ 10 bind bind ADP IN _ _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 13 element element NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 vitro vitro NOUN NN Number=Sing _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 repress repress NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ; ; PUNCT , _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 VDR VDR PROPN NNP Number=Sing _ _ _ _ 23 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 binding bind VERB VBG VerbForm=Ger _ _ _ _ 26 domain domain NOUN NN Number=Sing _ _ _ _ 27 alone alone ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 however however ADV RB _ _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 bound bound ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 element element NOUN NN Number=Sing _ _ _ _ 34 but but CCONJ CC _ _ _ _ _ 35 also also ADV RB _ _ _ _ _ 36 could could AUX MD VerbForm=Fin _ _ _ _ 37 not not PART RB _ _ _ _ _ 38 repress repress VERB VB VerbForm=Inf _ _ _ _ 39 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 2 2 NUM CD NumType=Card _ _ _ _ 42 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 9803 # text = These results indicate that DNA binding by VDR is necessary but not sufficient to mediate IL-2 repression. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 DNA Dna PROPN NNP Number=Sing _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 VDR VDR PROPN NNP Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 not not ADV RB _ _ _ _ _ 13 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 16 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 repression repression NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 9804 # text = By combining partially purified proteins in vitro, we observed the loss of the bound NFATp/AP-1-DNA complex upon inclusion of VDR or VDR-retinoid X receptor. 1 By by SCONJ IN _ _ _ _ _ 2 combining combi VERB VBG VerbForm=Ger _ _ _ _ 3 partially partially ADV RB _ _ _ _ _ 4 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 10 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 loss loss NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 bound bound ADJ JJ Degree=Pos _ _ _ _ 16 NFATp NFATp NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 DNA dna NOUN NN Number=Sing _ _ _ _ 23 complex complex NOUN NN Number=Sing _ _ _ _ 24 upon upon ADP IN _ _ _ _ _ 25 inclusion inclusion NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 VDR VDR PROPN NNP Number=Sing _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 VDR VDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 retinoid retinoid ADJ JJ Degree=Pos _ _ _ _ 32 X x NOUN NN Number=Sing _ _ _ _ 33 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 9805 # text = Order of addition and off-rate experiments indicate that the VDR-retinoid X receptor heterodimer blocks NFATp/AP-1 complex formation and then stably associates with the NF-AT-1 element. 1 Order order ADP IN _ _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 addition addition NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 off off NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 rate rate NOUN NN Number=Sing _ _ _ _ 8 experiments experiment NOUN NNS Number=Plur _ _ _ _ 9 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 VDR Vdr NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 retinoid retinoid NOUN NN Number=Sing _ _ _ _ 15 X x ADP IN _ _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ _ 17 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 18 blocks block NOUN NNS Number=Plur _ _ _ _ 19 NFATp NFATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 complex complex NOUN NN Number=Sing _ _ _ _ 25 formation formation NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 then then ADV RB PronType=Dem _ _ _ _ 28 stably stably ADV RB _ _ _ _ _ 29 associates associate VERB NNS Number=Plur _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 AT at NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ _ 37 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 9806 # text = This direct inhibition by a nuclear hormone receptor of transcriptional activators of the IL-2 gene may provide a mechanistic explanation of how vitamin derivatives can act as potent immunosuppressive agents. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 direct direct ADJ JJ Degree=Pos _ _ _ _ 3 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 hormone hormone NOUN NN Number=Sing _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 activators activator NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 may may AUX MD VerbForm=Fin _ _ _ _ 19 provide provide VERB VB VerbForm=Inf _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 mechanistic mechanistic ADJ JJ Degree=Pos _ _ _ _ 22 explanation explanation NOUN NN Number=Sing _ _ _ _ 23 of of SCONJ IN _ _ _ _ _ 24 how how ADV WRB PronType=Int _ _ _ _ 25 vitamin vitamin ADJ JJ Degree=Pos _ _ _ _ 26 derivatives derivative NOUN NNS Number=Plur _ _ _ _ 27 can can AUX MD VerbForm=Fin _ _ _ _ 28 act act VERB VB VerbForm=Inf _ _ _ _ 29 as as ADP IN _ _ _ _ _ 30 potent potent ADJ JJ Degree=Pos _ _ _ _ 31 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 32 agents agent NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9807 # text = Document 0030011940 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011940 0030011940 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9808 # text = Leukotriene B4 stimulates c-fos and c-jun gene transcription and AP-1 binding activity in human monocytes. 1 Leukotriene Leukotriene PROPN NNP Number=Sing _ _ _ _ 2 B4 B4 PROPN NNP Number=Sing _ _ _ _ 3 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 c- c- SYM NFP _ _ _ _ SpaceAfter=No 5 fos fo NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 c- c- SYM NFP _ _ _ _ SpaceAfter=No 8 jun jun NOUN NN Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 binding binding VERB VBG VerbForm=Ger _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9809 # text = We have examined the effect of leukotriene B4 (LTB4), a potent lipid proinflammatory mediator, on the expression of the proto-oncogenes c-jun and c-fos. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 leukotriene leukotriene NOUN NN Number=Sing _ _ _ _ 8 B4 B4 PROPN NNP Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 LTB4 LTB4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 potent potent NOUN NN Number=Sing _ _ _ _ 15 lipid lipid ADJ JJ Degree=Pos _ _ _ _ 16 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 17 mediator mediator NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 -oncogenes -oncogene NOUN NNS Number=Plur _ _ _ _ 26 c- c- PUNCT : _ _ _ _ SpaceAfter=No 27 jun jun NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 c- c- SYM NFP _ _ _ _ SpaceAfter=No 30 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 9810 # text = In addition, we looked at the modulation of nuclear factors binding specifically to the AP-1 element after LTB4 stimulation. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 looked look VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 at at ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 modulation modulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ _ 12 binding bind VERB VBG VerbForm=Ger _ _ _ _ 13 specifically specifically ADV RB _ _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 element element NOUN NN Number=Sing _ _ _ _ 20 after after ADP IN _ _ _ _ _ 21 LTB4 LTB4 NUM CD NumType=Card _ _ _ _ 22 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 9811 # text = LTB4 increased the expression of the c-fos gene in a time- and concentration-dependent manner. 1 LTB4 LTB4 PROPN NNP Number=Sing _ _ _ _ 2 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 fos fo NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 concentration concentration NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 19 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 9812 # text = The c-jun mRNA, which is constitutively expressed in human peripheral-blood monocytes at relatively high levels, was also slightly augmented by LTB4, although to a much lower extent than c-fos. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 c- c- SYM NFP _ _ _ _ SpaceAfter=No 3 jun jun PROPN NNP Number=Sing _ _ _ _ 4 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 constitutively constitutively ADV RB _ _ _ _ _ 9 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 peripheral peripheral ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 blood blood NOUN NN Number=Sing _ _ _ _ 15 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 16 at at ADP IN _ _ _ _ _ 17 relatively relatively ADV RB _ _ _ _ _ 18 high high ADJ JJ Degree=Pos _ _ _ _ 19 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 also also ADV RB _ _ _ _ _ 23 slightly slightly ADV RB _ _ _ _ _ 24 augmented augment VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 LTB4 LTB4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 although although SCONJ IN _ _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 much much ADJ JJ Degree=Pos _ _ _ _ 32 lower lower ADJ JJR Degree=Cmp _ _ _ _ 33 extent extent NOUN NN Number=Sing _ _ _ _ 34 than than ADP IN _ _ _ _ _ 35 c- c- SYM NFP _ _ _ _ SpaceAfter=No 36 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 9813 # text = The kinetics of expression of the two genes were also slightly different, with c-fos mRNA reaching a peak at 15 min after stimulation and c-jun at 30 min. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 genes gene NOUN NNS Number=Plur _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 also also ADV RB _ _ _ _ _ 11 slightly slightly ADV RB _ _ _ _ _ 12 different different ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 with with X GW _ _ _ _ _ 15 c- c- X GW _ _ _ _ SpaceAfter=No 16 fos fo X GW _ _ _ _ _ 17 mRNA mRNA X GW _ _ _ _ _ 18 reaching reach VERB VBG VerbForm=Ger _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 peak peak NOUN NN Number=Sing _ _ _ _ 21 at at ADP IN _ _ _ _ _ 22 15 15 NUM CD NumType=Card _ _ _ _ 23 min min NOUN NNS Number=Plur _ _ _ _ 24 after after ADP IN _ _ _ _ _ 25 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 c- c- SYM NFP _ _ _ _ SpaceAfter=No 28 jun jun NOUN NN Number=Sing _ _ _ _ 29 at at ADP IN _ _ _ _ _ 30 30 30 NUM CD NumType=Card _ _ _ _ 31 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 9814 # text = Both messages rapidly declined thereafter. 1 Both both DET DT _ _ _ _ _ 2 messages message NOUN NNS Number=Plur _ _ _ _ 3 rapidly rapidly ADV RB _ _ _ _ _ 4 declined decline VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 thereafter thereafter ADV RB _ _ _ _ SpaceAfter=No 6 . . PUNCT . _ _ _ _ _ # sent_id = 9815 # text = Stability of the c-fos and c-jun mRNA was not affected by LTB4, as assessed after actinomycin D treatment. 1 Stability stability NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 c- c- SYM NFP _ _ _ _ SpaceAfter=No 5 fos fo NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 c- c- SYM NFP _ _ _ _ SpaceAfter=No 8 jun jun PROPN NNP Number=Sing _ _ _ _ 9 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 LTB4 LTB4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 as as SCONJ IN _ _ _ _ _ 17 assessed assess VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 after after ADP IN _ _ _ _ _ 19 actinomycin actinomycin ADP IN _ _ _ _ _ 20 D d PROPN NNP Number=Sing _ _ _ _ 21 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 9816 # text = Nuclear transcription studies in vitro showed that LTB4 increased the transcription of the c-fos gene 7-fold and the c-jun gene 1.4-fold. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 vitro vitro PROPN NNP Number=Sing _ _ _ _ 6 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 LTB4 LTB4 PROPN NNP Number=Sing _ _ _ _ 9 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 fos fo NOUN NNS Number=Plur _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 fold fold NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 c- c- SYM NFP _ _ _ _ SpaceAfter=No 24 jun jun NOUN NN Number=Sing _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 1.4 1.4 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 9817 # text = Resting monocytes contained nuclear factors binding to the AP-1 element, but stimulation of monocytes with LTB4 induced greater AP-1-binding activity of nuclear proteins. 1 Resting rest ADJ JJ Degree=Pos _ _ _ _ 2 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 3 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factors factor NOUN NNS Number=Plur _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 LTB4 LTB4 PROPN NNP Number=Sing _ _ _ _ 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 greater greater ADJ JJR Degree=Cmp _ _ _ _ 22 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 binding bind VERB VBG VerbForm=Ger _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 30 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 9818 # text = These results indicate that LTB4 may regulate the production of different cytokines by modulating the yield and/or the function of transcription factors such as AP-1-binding proto-oncogene products. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 LTB4 LTB4 PROPN NNP Number=Sing _ _ _ _ 6 may may AUX MD VerbForm=Fin _ _ _ _ 7 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 production production NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 different different ADJ JJ Degree=Pos _ _ _ _ 12 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 13 by by SCONJ IN _ _ _ _ _ 14 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 yield yield NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ SpaceAfter=No 18 / / PUNCT , _ _ _ _ SpaceAfter=No 19 or or CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 function function NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factors factor NOUN NNS Number=Plur _ _ _ _ 25 such such ADJ JJ Degree=Pos _ _ _ _ 26 as as ADP IN _ _ _ _ _ 27 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 binding binding VERB VBG VerbForm=Ger _ _ _ _ 32 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 -oncogene -oncogene ADJ JJ Degree=Pos _ _ _ _ 34 products product NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9819 # text = Document 0030011942 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011942 0030011942 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9820 # text = Reactive oxygen intermediates as apparently widely used messengers in the activation of the NF-kappa B transcription factor and HIV-1. 1 Reactive Reactive ADJ JJ Degree=Pos _ _ _ _ 2 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 3 intermediates intermediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 as as ADV RB _ _ _ _ _ 5 apparently apparently ADV RB _ _ _ _ _ 6 widely widely ADV RB _ _ _ _ _ 7 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 messengers messenger NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9821 # text = Hydrogen peroxide and oxygen radicals are agents commonly produced during inflammatory processes. 1 Hydrogen Hydrogen ADJ JJ Degree=Pos _ _ _ _ 2 peroxide peroxide NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 oxygen oxygen ADJ JJ Degree=Pos _ _ _ _ 5 radicals radical NOUN NNS Number=Plur _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 agents agent NOUN NNS Number=Plur _ _ _ _ 8 commonly commonly ADV RB _ _ _ _ _ 9 produced produce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 during during ADP IN _ _ _ _ _ 11 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 12 processes process NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 9822 # text = In this study, we show that micromolar concentrations of H2O2 can induce the expression and replication of HIV-1 in a human T cell line. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 micromolar micromolar ADJ JJ Degree=Pos _ _ _ _ 9 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 H2O2 h2o2 NOUN NN Number=Sing _ _ _ _ 12 can can AUX MD VerbForm=Fin _ _ _ _ 13 induce induce VERB VB VerbForm=Inf _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 replication replication NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 T t NOUN NN Number=Sing _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 9823 # text = The effect is mediated by the NF-kappa B transcription factor which is potently and rapidly activated by an H2O2 treatment of cells from its inactive cytoplasmic form. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 potently potently ADV RB _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 rapidly rapidly ADV RB _ _ _ _ _ 18 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 H2O2 H2O2 NUM CD NumType=Card _ _ _ _ 22 treatment treatment NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 from from ADP IN _ _ _ _ _ 26 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 27 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 28 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 29 form form NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 9824 # text = N-acetyl-L-cysteine (NAC), a well characterized antioxidant which counteracts the effects of reactive oxygen intermediates (ROI) in living cells, prevented the activation of NF-kappa B by H2O2. 1 N-acetyl N-acetyl ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 -L- -L- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 NAC NAC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 well well ADV RB Degree=Pos _ _ _ _ 10 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 antioxidant antioxidant NOUN NN Number=Sing _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 counteracts counteract VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 effects effect NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 18 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 19 intermediates intermediate NOUN NNS Number=Plur _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 ROI Roi X AFX _ _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 living living ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappa kappa PROPN NNP Number=Sing _ _ _ _ 34 B b PROPN NNP Number=Sing _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 H2 H2 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 O2 O2 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 9825 # text = NAC and other thiol compounds also blocked the activation of NF-kappa B by cycloheximide, double-stranded RNA, calcium ionophore, TNF-alpha, active phorbol ester, interleukin-1, lipopolysaccharide and lectin. 1 NAC NAC PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 thiol thiol NOUN NN Number=Sing _ _ _ _ 5 compounds compound NOUN NNS Number=Plur _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 stranded strand VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 RNA RNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 calcium calcium NOUN NN Number=Sing _ _ _ _ 24 ionophore ionophore NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 active active ADJ JJ Degree=Pos _ _ _ _ 31 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 32 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 lectin lectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 9826 # text = This suggests that diverse agents thought to activate NF-kappa B by distinct intracellular pathways might all act through a common mechanism involving the synthesis of ROI. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 diverse diverse ADJ JJ Degree=Pos _ _ _ _ 5 agents agent NOUN NNS Number=Plur _ _ _ _ 6 thought think VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 activate activate VERB VB VerbForm=Inf _ _ _ _ 9 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 15 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 16 pathways pathway NOUN NNS Number=Plur _ _ _ _ 17 might might AUX MD VerbForm=Fin _ _ _ _ 18 all all ADV RB _ _ _ _ _ 19 act act VERB VB VerbForm=Inf _ _ _ _ 20 through through ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 common common ADJ JJ Degree=Pos _ _ _ _ 23 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 24 involving involve VERB VBG VerbForm=Ger _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 ROI ROI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 9827 # text = ROI appear to serve as messengers mediating directly or indirectly the release of the inhibitory subunit I kappa B from NF-kappa B. 1 ROI ROI PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 appear appear VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 serve serve VERB VB VerbForm=Inf _ _ _ _ 5 as as SCONJ IN _ _ _ _ _ 6 messengers messenger NOUN NNS Number=Plur _ _ _ _ 7 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 8 directly directly ADV RB _ _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 indirectly indirectly ADV RB _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 release release NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 16 subunit subunit NOUN NN Number=Sing _ _ _ _ 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B B PROPN NNP Number=Sing _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa PROPN NNP Number=Sing _ _ _ _ 24 B. B. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9828 # text = Document 0030011945 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011945 0030011945 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9829 # text = The immediate-early gene product Egr-1 regulates the human interleukin-2 receptor beta-chain promoter through noncanonical Egr and Sp1 binding sites. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 early early ADJ JJ Degree=Pos _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 product product NOUN NN Number=Sing _ _ _ _ 7 Egr Egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ _ 17 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 chain chain NOUN NN Number=Sing _ _ _ _ 20 promoter promoter NOUN NN Number=Sing _ _ _ _ 21 through through ADP IN _ _ _ _ _ 22 noncanonical noncanonical ADJ JJ Degree=Pos _ _ _ _ 23 Egr Egr PROPN NNP Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 26 binding binding VERB VBG VerbForm=Ger _ _ _ _ 27 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9830 # text = The interleukin-2 IL-2 receptor beta-chain (IL-2Rbeta) is an essential component of the receptors for IL-2 and IL-15. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 -chain -chain NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 Rbeta Rbeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 essential essential ADJ JJ Degree=Pos _ _ _ _ 20 component component NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 receptors receptor NOUN NNS Number=Plur _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 15 15 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 9831 # text = Although IL-2Rbeta is constitutively expressed by lymphocytes, its expression can be further induced by a number of stimuli, including phorbol 12-myristate 13-acetate (PMA). 1 Although although SCONJ IN _ _ _ _ _ 2 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 Rbeta Rbeta PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 constitutively constitutively ADV RB _ _ _ _ _ 8 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 can can AUX MD VerbForm=Fin _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 further further ADV RB _ _ _ _ _ 17 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 number number NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 including include VERB VBG VerbForm=Ger _ _ _ _ 25 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 26 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - PUNCT : _ _ _ _ SpaceAfter=No 28 myristate myristate NOUN NN Number=Sing _ _ _ _ 29 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 - - PUNCT : _ _ _ _ SpaceAfter=No 31 acetate acetate NOUN NN Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 9832 # text = We have now characterized factors that bind to an enhancer region located between nucleotides -170 and -139 of the human IL-2Rbeta promoter. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 now now ADV RB _ _ _ _ _ 4 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 factors factor NOUN NNS Number=Plur _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 11 region region NOUN NN Number=Sing _ _ _ _ 12 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 between between ADP IN _ _ _ _ _ 14 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 170 170 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 - - SYM SYM _ _ _ _ SpaceAfter=No 19 139 139 NUM CD NumType=Card _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 Rbeta Rbeta PROPN NNP Number=Sing _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 9833 # text = Both Sp1 and Sp3 bound to the 5' portion of this region, whereas a PMA-inducible factor (PIF) mainly bound to its 3' portion and bound to the Sp binding motifs as well. 1 Both both CCONJ CC _ _ _ _ _ 2 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 Sp3 Sp3 NUM CD NumType=Card _ _ _ _ 5 bound bound ADJ JJ Degree=Pos _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ' 's PUNCT `` _ _ _ _ _ 10 portion portion NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 13 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 whereas whereas SCONJ IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 PIF PIF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 mainly mainly ADV RB _ _ _ _ _ 25 bound bound ADJ JJ Degree=Pos _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 28 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 ' ' PUNCT `` _ _ _ _ _ 30 portion portion NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 bound bound ADJ JJ Degree=Pos _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 Sp sp NOUN NN Number=Sing _ _ _ _ 36 binding bind VERB VBG VerbForm=Ger _ _ _ _ 37 motifs motif NOUN NNS Number=Plur _ _ _ _ 38 as as ADV RB _ _ _ _ _ 39 well well ADV RB Degree=Pos _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 9834 # text = In Jurkat T cells, induction of PIF DNA binding activity was rapidly induced, required de novo protein synthesis, and was sustained at a high level for at least 23 h. 1 In in ADP IN _ _ _ _ _ 2 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 induction induction NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 PIF PIF NOUN NN Number=Sing _ _ _ _ 9 DNA Dna NOUN NN Number=Sing _ _ _ _ 10 binding binding VERB VBG VerbForm=Ger _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 rapidly rapidly ADV RB _ _ _ _ _ 14 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 de de X FW Foreign=Yes _ _ _ _ 18 novo novo ADJ JJ Degree=Pos _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=1|Tense=Past|VerbForm=Fin _ _ _ _ 24 sustained sustain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 at at ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 high high ADJ JJ Degree=Pos _ _ _ _ 28 level level NOUN NN Number=Sing _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 at at ADV RB _ _ _ _ _ 31 least least ADV RBS Degree=Sup _ _ _ _ 32 23 23 NUM CD NumType=Card _ _ _ _ 33 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 9835 # text = Interestingly, PIF was constitutively activated in human T-cell leukemia virus type 1-transformed MT-2 cells. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 PIF PIF PROPN NNP Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 constitutively constitutively ADV RB _ _ _ _ _ 6 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 12 virus virus NOUN NN Number=Sing _ _ _ _ 13 type type NOUN NN Number=Sing _ _ _ _ 14 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 MT mt NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 9836 # text = In this paper, we demonstrate that PIF is Egr-1 based on its recognition by anti-Egr-1 antisera in gel mobility shift assays, even though the IL-2Rbeta DNA binding motif differed substantially from the canonical Egr-1 binding site. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 paper paper NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 PIF PIF PROPN NNP Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 -1 -1 NUM CD NumType=Card _ _ _ _ 12 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 recognition recognition NOUN NN Number=Sing _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 anti-Egr anti-Egr ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 -1 -1 NUM CD NumType=Card _ _ _ _ 19 antisera antisera NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 gel gel NOUN NN Number=Sing _ _ _ _ 22 mobility mobility NOUN NN Number=Sing _ _ _ _ 23 shift shift NOUN NN Number=Sing _ _ _ _ 24 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 even even ADV RB _ _ _ _ _ 27 though though SCONJ IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 IL- Il- NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 Rbeta Rbeta PROPN NNP Number=Sing _ _ _ _ 32 DNA dna PROPN NNP Number=Sing _ _ _ _ 33 binding bind VERB VBG VerbForm=Ger _ _ _ _ 34 motif motif NOUN NN Number=Sing _ _ _ _ 35 differed differ VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 substantially substantially ADV RB _ _ _ _ _ 37 from from ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 canonical canonical ADJ JJ Degree=Pos _ _ _ _ 40 Egr Egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 -1 -1 NUM CD NumType=Card _ _ _ _ 42 binding bind VERB VBG VerbForm=Ger _ _ _ _ 43 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 9837 # text = In addition, Egr-1 bound to the Sp binding site. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 bound bound NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 Sp sp NOUN NN Number=Sing _ _ _ _ 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 9838 # text = In Jurkat cells, both sites were required for maximal IL-2Rbeta promoter activity, and in HeLaS3 cells, transfection of Egr-1 could drive activity of a reporter construct containing both sites. 1 In in ADP IN _ _ _ _ _ 2 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 both both DET DT _ _ _ _ _ 6 sites site NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 11 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 Rbeta Rbeta PROPN NNP Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 HeLaS3 HeLaS3 NOUN NN Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 transfection transfection NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 -1 -1 NUM CD NumType=Card _ _ _ _ 27 could could AUX MD VerbForm=Fin _ _ _ _ 28 drive drive VERB VB VerbForm=Inf _ _ _ _ 29 activity activity NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 reporter reporter NOUN NN Number=Sing _ _ _ _ 33 construct construct NOUN NN Number=Sing _ _ _ _ 34 containing contain VERB VBG VerbForm=Ger _ _ _ _ 35 both both DET DT _ _ _ _ _ 36 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 9839 # text = Moreover, Sp1 and Egr-1 could form a complex with kinetics that correlated with the production of Egr-1 in Jurkat cells upon PMA stimulation. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 -1 -1 NUM CD NumType=Card _ _ _ _ 7 could could AUX MD VerbForm=Fin _ _ _ _ 8 form form VERB VB VerbForm=Inf _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 complex complex NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 correlated correlate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 production production NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 -1 -1 NUM CD NumType=Card _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 upon upon ADP IN _ _ _ _ _ 25 PMA PMA DET DT Definite=Ind|PronType=Art _ _ _ _ 26 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 9840 # text = Thus, Sp1 and Egr-1 physically and functionally cooperate to mediate maximal IL-2Rbeta promoter activity. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 -1 -1 NUM CD NumType=Card _ _ _ _ 7 physically physically ADV RB _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 functionally functionally ADV RB _ _ _ _ _ 10 cooperate cooperate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 13 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 14 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 Rbeta Rbeta PROPN NNP Number=Sing _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9841 # text = Document 0030011947 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011947 0030011947 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9842 # text = Processing of the precursor of NF-kappa B by the HIV-1 protease during acute infection. 1 Processing processing NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 precursor precursor NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 protease protease NOUN NN Number=Sing _ _ _ _ 16 during during ADP IN _ _ _ _ _ 17 acute acute ADJ JJ Degree=Pos _ _ _ _ 18 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9843 # text = Transcription of the human immunodeficiency virus type-1 (HIV-1) genome is regulated in part by cellular factors and is stimulated by activation of latently infected T cells. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT : _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 genome genome NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 part part NOUN NN Number=Sing _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 latently latently ADV RB _ _ _ _ _ 30 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 9844 # text = T-cell activation also correlates with the induction of the factor NF-kappa B which binds to two adjacent sites in the HIV-1 long terminal repeat. 1 T- T- SYM NFP _ _ _ _ SpaceAfter=No 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 induction induction NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 two two NUM CD NumType=Card _ _ _ _ 20 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 21 sites site NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 long long ADJ JJ Degree=Pos _ _ _ _ 28 terminal terminal NOUN NN Number=Sing _ _ _ _ 29 repeat repeat NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 9845 # text = This factor consists of two DNA-binding subunits of relative molecular mass 50,000 (50K) associated with two 65K subunits. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 consists consist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 two two NUM CD NumType=Card _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 subunits subunit NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 relative relative ADJ JJ Degree=Pos _ _ _ _ 12 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 13 mass mass NOUN NN Number=Sing _ _ _ _ 14 50,000 50,000 NUM CD NumType=Card _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 K k NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 two two NUM CD NumType=Card _ _ _ _ 22 65 65 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 K k NUM CD NumType=Card _ _ _ _ 24 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 9846 # text = It is located in the nucleus in mature B cells, but is present in other cell types as an inactive cytoplasmic complex. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 mature mature ADJ JJ Degree=Pos _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 present present ADJ JJ Degree=Pos _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 other other ADJ JJ Degree=Pos _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 types type NOUN NNS Number=Plur _ _ _ _ 19 as as ADP IN _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 22 cytoplasmic cytoplasmic NOUN NN Number=Sing _ _ _ _ 23 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 9847 # text = External stimuli, including those that activate T cells, result in nuclear translocation of active NF-kappa B. 1 External external ADJ JJ Degree=Pos _ _ _ _ 2 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 including include VERB VBG VerbForm=Ger _ _ _ _ 5 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 activate activate ADJ JJ Degree=Pos _ _ _ _ 8 T t NOUN NN Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 result result NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 translocation translocation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 active active ADJ JJ Degree=Pos _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa PROPN NNP Number=Sing _ _ _ _ 20 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 9848 # text = The cloning of the complementary DNA for the 50K subunit helped to identify an exclusively cytoplasmic 105K precursor (p105) (V.B., P.K. and A.I., manuscript submitted). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cloning cloning NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 complementary complementary ADJ JJ Degree=Pos _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 K k NUM CD NumType=Card _ _ _ _ 11 subunit subunit NOUN NN Number=Sing _ _ _ _ 12 helped help VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 identify identify VERB VB VerbForm=Inf _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 exclusively exclusively ADV RB _ _ _ _ _ 17 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 18 105 105 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 K k NUM CD NumType=Card _ _ _ _ 20 precursor precursor NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 p105 p105 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 V.B. V.B. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 P.K. P.K. PROPN NNP Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 A.I. A.I. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 manuscript manuscript NOUN NN Number=Sing _ _ _ _ 32 submitted submit VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 9849 # text = The expression of active NF-kappa B might therefore also be regulated by the extent of processing of p105. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 active active ADJ JJ Degree=Pos _ _ _ _ 5 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 might might AUX MD VerbForm=Fin _ _ _ _ 10 therefore therefore ADV RB _ _ _ _ _ 11 also also ADV RB _ _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 extent extent NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 processing processing NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 p105 p105 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 9850 # text = Because HIV-1 requires active NF-kappa B for efficient transcription, we tested the effect of HIV-1 infection on the processing of the human 105K precursor. 1 Because because SCONJ IN _ _ _ _ _ 2 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - SYM SYM _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 active active ADJ JJ Degree=Pos _ _ _ _ 7 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 16 tested test VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 effect effect NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 infection infection NOUN NN Number=Sing _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 processing processing NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 105 105 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 K k NUM CD NumType=Card _ _ _ _ 32 precursor precursor NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 9851 # text = We show here that the HIV-1 protease can process p105 and increases levels of active nuclear NF-kappa B complex. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 protease protease NOUN NN Number=Sing _ _ _ _ 10 can can AUX MD VerbForm=Fin _ _ _ _ 11 process process VERB VB VerbForm=Inf _ _ _ _ 12 p105 p105 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 levels level NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 active active ADJ JJ Degree=Pos _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa NOUN NN Number=Sing _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ _ 23 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9852 # text = Document 0030011949 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011949 0030011949 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9853 # text = Transcription specific differences visualized by fluorescence in situ hybridization pattern on interphase nuclei of different cell types. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 specific specific ADJ JJ Degree=Pos _ _ _ _ 3 differences difference NOUN NNS Number=Plur _ _ _ _ 4 visualized visualize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 fluorescence fluorescence NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 situ situ NOUN NN Number=Sing _ _ _ _ 9 hybridization hybridization NOUN NN Number=Sing _ _ _ _ 10 pattern pattern NOUN NN Number=Sing _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 interphase interphase ADJ JJ Degree=Pos _ _ _ _ 13 nuclei nuclei NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 different different ADJ JJ Degree=Pos _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9854 # text = Application of a "formamide free" and thus "material preserving" in situ hybridization technique using the cDNA of the myf3 gene revealed the following results: Human rhabdomyosarcoma cells, characterized by a high expression of myf3 show intensive hybridization signals in their interphase. 1 Application application NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 " " PUNCT `` _ _ _ _ SpaceAfter=No 5 formamide formamide VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 6 free free ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 " " PUNCT '' _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 thus thus ADV RB _ _ _ _ _ 10 " " PUNCT `` _ _ _ _ SpaceAfter=No 11 material material ADJ JJ Degree=Pos _ _ _ _ 12 preserving preserve NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 " " PUNCT '' _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 situ situ NOUN NN Number=Sing _ _ _ _ 16 hybridization hybridization NOUN NN Number=Sing _ _ _ _ 17 technique technique NOUN NN Number=Sing _ _ _ _ 18 using use VERB VBG VerbForm=Ger _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 myf3 myf3 NOUN NN Number=Sing _ _ _ _ 24 gene gene PRON NN Number=Sing _ _ _ _ 25 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 following follow VERB VBG VerbForm=Ger _ _ _ _ 28 results result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 : : PUNCT : _ _ _ _ _ 30 Human human ADJ JJ Degree=Pos _ _ _ _ 31 rhabdomyosarcoma rhabdomyosarcoma NOUN NN Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 high high ADJ JJ Degree=Pos _ _ _ _ 38 expression expression NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 myf3 myf3 NUM CD NumType=Card _ _ _ _ 41 show show NOUN NN Number=Sing _ _ _ _ 42 intensive intensive ADJ JJ Degree=Pos _ _ _ _ 43 hybridization hybridization NOUN NN Number=Sing _ _ _ _ 44 signals signal NOUN NNS Number=Plur _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 47 interphase interphase NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 9855 # text = RNase treatment prior to hybridization considerably reduces the size of this signals. 1 RNase RNase NOUN NN Number=Sing _ _ _ _ 2 treatment treatment NOUN NN Number=Sing _ _ _ _ 3 prior prior ADJ JJ Degree=Pos _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 hybridization hybridization NOUN NN Number=Sing _ _ _ _ 6 considerably considerably ADV RB _ _ _ _ _ 7 reduces reduce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 size size NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 12 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 9856 # text = In comparison, isolated nuclei of human lymphocytes in which no need for the expression of this gene exists, show barely hybridization signals. 1 In in ADP IN _ _ _ _ _ 2 comparison comparison NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 nuclei nuclei NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 which which PRON WDT PronType=Rel _ _ _ _ 11 no no DET DT _ _ _ _ _ 12 need need NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 exists exist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 show show VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 22 barely barely ADV RB _ _ _ _ _ 23 hybridization hybridization NOUN NN Number=Sing _ _ _ _ 24 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 9857 # text = Correspondingly, 1 Correspondingly Correspondingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ # sent_id = 9858 # text = RNase treatment had no effect on hybridization pattern at all. 1 RNase RNase ADJ JJ Degree=Pos _ _ _ _ 2 treatment treatment NOUN NN Number=Sing _ _ _ _ 3 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 no no DET DT _ _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 hybridization hybridization NOUN NN Number=Sing _ _ _ _ 8 pattern pattern NOUN NN Number=Sing _ _ _ _ 9 at at ADV RB _ _ _ _ _ 10 all all ADV RB _ _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 9859 # text = In conclusion an increased transcription efficiency of a cell type specific gene is accompanied by a higher hybridization accessibility in the corresponding cell nuclei. 1 In in ADP IN _ _ _ _ _ 2 conclusion conclusion NOUN NN Number=Sing _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 efficiency efficiency NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 type type NOUN NN Number=Sing _ _ _ _ 11 specific specific ADJ JJ Degree=Pos _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 higher higher ADJ JJR Degree=Cmp _ _ _ _ 18 hybridization hybridization NOUN NN Number=Sing _ _ _ _ 19 accessibility accessibility NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 corresponding corresponding NOUN NN Number=Sing _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 nuclei nuclei NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9860 # text = Document 0030011953 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011953 0030011953 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9861 # text = Protease treatment of nuclear extracts distinguishes between class II MHC X1 box DNA-binding proteins in wild-type and class II-deficient B cells. 1 Protease Protease NOUN NN Number=Sing _ _ _ _ 2 treatment treatment NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 extracts extract NOUN NNS Number=Plur _ _ _ _ 6 distinguishes distinguish NOUN NNS Number=Plur _ _ _ _ 7 between between ADP IN _ _ _ _ _ 8 class class NOUN NN Number=Sing _ _ _ _ 9 II ii NUM CD NumType=Card _ _ _ _ 10 MHC MHC PROPN NNP Number=Sing _ _ _ _ 11 X1 X1 PROPN NNP Number=Sing _ _ _ _ 12 box box NOUN NN Number=Sing _ _ _ _ 13 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 binding binding VERB VBG VerbForm=Ger _ _ _ _ 16 proteins protein NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 type type NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 class class NOUN NN Number=Sing _ _ _ _ 23 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9862 # text = The X box region is critical for directing the expression of class II major histocompatibility complex genes in B lymphocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 X x NOUN NN Number=Sing _ _ _ _ 3 box box NOUN NN Number=Sing _ _ _ _ 4 region region NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 critical critical ADJ JJ Degree=Pos _ _ _ _ 7 for for SCONJ IN _ _ _ _ _ 8 directing direct VERB VBG VerbForm=Ger _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 class class NOUN NN Number=Sing _ _ _ _ 13 II ii NUM CD NumType=Card _ _ _ _ 14 major major ADJ JJ Degree=Pos _ _ _ _ 15 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 16 complex complex NOUN NN Number=Sing _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 B b ADJ JJ Degree=Pos _ _ _ _ 20 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 9863 # text = Although several class II promoter-specific DNA binding factors have been described, only the X box region factor, RFX, shows a genetic correlation with class II expression, being deficient in some B cell lines derived from patients with class II-deficient congenital immunodeficiency. 1 Although although SCONJ IN _ _ _ _ _ 2 several several ADJ JJ Degree=Pos _ _ _ _ 3 class class NOUN NN Number=Sing _ _ _ _ 4 II ii NUM CD NumType=Card _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 DNA dna NOUN NN Number=Sing _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ _ 11 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 13 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 only only ADV RB _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 X x NOUN NN Number=Sing _ _ _ _ 18 box box NOUN NN Number=Sing _ _ _ _ 19 region region NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 RFX Rfx PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 shows show VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 27 correlation correlation NOUN NN Number=Sing _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 class class NOUN NN Number=Sing _ _ _ _ 30 II ii NUM CD NumType=Card _ _ _ _ 31 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 being be AUX VBG VerbForm=Ger _ _ _ _ 34 deficient deficient VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 some some DET DT _ _ _ _ _ 37 B b ADJ JJ Degree=Pos _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 lines line NOUN NNS Number=Plur _ _ _ _ 40 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 from from ADP IN _ _ _ _ _ 42 patients patient NOUN NNS Number=Plur _ _ _ _ 43 with with ADP IN _ _ _ _ _ 44 class class NOUN NN Number=Sing _ _ _ _ 45 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 48 congenital congenital ADJ JJ Degree=Pos _ _ _ _ 49 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 9864 # text = To further evaluate the role of X box DNA-binding proteins in class II gene expression, the role of the X box region was examined in both class II-positive and -negative lymphoid cells. 1 To to PART TO _ _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 evaluate evaluate VERB VB VerbForm=Inf _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 X x NOUN NN Number=Sing _ _ _ _ 8 box box NOUN NN Number=Sing _ _ _ _ 9 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 proteins protein NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 class class NOUN NN Number=Sing _ _ _ _ 15 II ii NUM CD NumType=Card _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 role role NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 X x PROPN NNP Number=Sing _ _ _ _ 24 box box NOUN NN Number=Sing _ _ _ _ 25 region region NOUN NN Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 both both DET DT _ _ _ _ _ 30 class class NOUN NN Number=Sing _ _ _ _ 31 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 positive positive ADJ JJ Degree=Pos _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 negative negative ADJ JJ Degree=Pos _ _ _ _ 37 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 9865 # text = In addition to the wild-type B cell line Raji, two class II transcriptional mutant cell lines, SJO and RJ2.2.5, and Jurkat, a class II negative T cell line, were examined. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 type type NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 line line NOUN NN Number=Sing _ _ _ _ 11 Raji Raji PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 two two NUM CD NumType=Card _ _ _ _ 14 class class NOUN NN Number=Sing _ _ _ _ 15 II ii NUM CD NumType=Card _ _ _ _ 16 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 17 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 SJO SJO PROPN NNP Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 RJ RJ PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 2.2.5 2.2.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 class class NOUN NN Number=Sing _ _ _ _ 31 II ii NUM CD NumType=Card _ _ _ _ 32 negative negative ADJ JJ Degree=Pos _ _ _ _ 33 T t PROPN NNP Number=Sing _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 38 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 9866 # text = In contrast to wild-type B cells, neither of the class II mutant cell lines could use the X box region to direct the expression of a transiently transfected reporter gene, indicating that the X box-dependent transcriptional pathway is defective in these cells. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 type type NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 neither neither DET DT _ _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 class class NOUN NN Number=Sing _ _ _ _ 14 II ii NUM CD NumType=Card _ _ _ _ 15 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 lines line NOUN NNS Number=Plur _ _ _ _ 18 could could AUX MD VerbForm=Fin _ _ _ _ 19 use use VERB VB VerbForm=Inf _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 X x NOUN NN Number=Sing _ _ _ _ 22 box box NOUN NN Number=Sing _ _ _ _ 23 region region NOUN NN Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 direct direct VERB VB VerbForm=Inf _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 transiently transiently ADV RB _ _ _ _ _ 31 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 reporter reporter NOUN NN Number=Sing _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 36 that that SCONJ IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 X x PROPN NNP Number=Sing _ _ _ _ 39 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 42 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 43 pathway pathway NOUN NN Number=Sing _ _ _ _ 44 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 45 defective defective ADJ JJ Degree=Pos _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 48 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 9867 # text = The binding activity of the X1 box DNA-binding protein RFX was examined and found to be present in wild-type B cells and the mutant RJ2.2.5 but was absent in SJO and Jurkat. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 binding bind VERB VBG VerbForm=Ger _ _ _ _ 3 activity activity NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 X1 X1 PROPN NNP Number=Sing _ _ _ _ 7 box box NOUN NN Number=Sing _ _ _ _ 8 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 binding bind VERB VBG VerbForm=Ger _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 RFX Rfx PROPN NNP Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 present presend ADJ JJ Degree=Pos _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 type type NOUN NN Number=Sing _ _ _ _ 24 B b ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 29 RJ2.2.5 Rj2.2.5 NOUN NN Number=Sing _ _ _ _ 30 but but CCONJ CC _ _ _ _ _ 31 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 32 absent absend VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 SJO SJO PROPN NNP Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 9868 # text = However, other X1 box-specific activities were detected in all these cell lines. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 X1 X1 NOUN NN Number=Sing _ _ _ _ 5 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 activities activity NOUN NNS Number=Plur _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 all all DET PDT _ _ _ _ _ 13 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 9869 # text = To determine whether these different X1 box activities represented distinct DNA binding proteins or multimeric forms of the same factor(s), protease treatment of the crude nuclear extracts followed by DNA-binding assays were carried out and demonstrated that B cell extracts contain at least two X1-specific factors. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 different different ADJ JJ Degree=Pos _ _ _ _ 6 X1 X1 NOUN NN Number=Sing _ _ _ _ 7 box box NOUN NN Number=Sing _ _ _ _ 8 activities activity NOUN NNS Number=Plur _ _ _ _ 9 represented represent VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 11 DNA dna NOUN NN Number=Sing _ _ _ _ 12 binding bind VERB VBG VerbForm=Ger _ _ _ _ 13 proteins protein NOUN NNS Number=Plur _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 multimeric multimeric ADJ JJ Degree=Pos _ _ _ _ 16 forms form NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 same same ADJ JJ Degree=Pos _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 s s X AFX _ _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 protease protease ADJ JJ Degree=Pos _ _ _ _ 26 treatment treatment NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 crude crude ADJ JJ Degree=Pos _ _ _ _ 30 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 31 extracts extract NOUN NNS Number=Plur _ _ _ _ 32 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 binding binding VERB VBG VerbForm=Ger _ _ _ _ 37 assays assay NOUN NNS Number=Plur _ _ _ _ 38 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 39 carried carry VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 40 out out ADP RP _ _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 44 B b ADJ JJ Degree=Pos _ _ _ _ 45 cell cell NOUN NN Number=Sing _ _ _ _ 46 extracts extract NOUN NNS Number=Plur _ _ _ _ 47 contain contain VERB VB VerbForm=Inf _ _ _ _ 48 at at ADV RB _ _ _ _ _ 49 least least ADV RBS Degree=Sup _ _ _ _ 50 two two NUM CD NumType=Card _ _ _ _ 51 X1 X1 NUM CD NumType=Card _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 specific specific ADJ JJ Degree=Pos _ _ _ _ 54 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 9870 # text = One of these cleaved products (band 1 pk) correlates with RFX activity. 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 cleaved cleaved ADJ JJ Degree=Pos _ _ _ _ 5 products product NOUN NNS Number=Plur _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 band band NOUN NN Number=Sing _ _ _ _ 8 1 1 NUM CD NumType=Card _ _ _ _ 9 pk pk NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 RFX RFX PROPN NNP Number=Sing _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 9871 # text = A similar comparison with protease-treated extracts prepared from Jurkat cells demonstrated the presence of the band 1pk activity despite an absence of the native RFX activity. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 similar similar ADJ JJ Degree=Pos _ _ _ _ 3 comparison comparison NOUN NN Number=Sing _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 protease protease NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 extracts extract NOUN NNS Number=Plur _ _ _ _ 9 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 presence presence NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 band band NOUN NN Number=Sing _ _ _ _ 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 pk pk NOUN NN Number=Sing _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 despite despite ADP IN _ _ _ _ _ 23 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 absence absence NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 native native ADJ JJ Degree=Pos _ _ _ _ 28 RFX RFX NOUN NN Number=Sing _ _ _ _ 29 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 9872 # text = In contrast, protease treatment and analysis of SJO extracts showed no detectable levels of the band 1pk activity. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 protease protease NOUN NN Number=Sing _ _ _ _ 5 treatment treatment NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 analysis analysis NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 SJO SJO PROPN NNP Number=Sing _ _ _ _ 10 extracts extract NOUN NNS Number=Plur _ _ _ _ 11 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 no no DET DT _ _ _ _ _ 13 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 14 levels level NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 band band NOUN NN Number=Sing _ _ _ _ 18 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 pk pk NOUN NN Number=Sing _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 9873 # text = These results demonstrate that multiple X1 box-specific DNA-binding activities exist in all lymphoid cells, but the presence of an actively binding RFX species correlates with class II transcription. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 6 X1 X1 NOUN NN Number=Sing _ _ _ _ 7 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 activities activity NOUN NNS Number=Plur _ _ _ _ 14 exist exist VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 all all DET DT _ _ _ _ _ 17 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 presence presence NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 actively actively ADV RB _ _ _ _ _ 26 binding bind VERB VBG VerbForm=Ger _ _ _ _ 27 RFX RFX PROPN NNP Number=Sing _ _ _ _ 28 species species NOUN NNS Number=Plur _ _ _ _ 29 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 class class NOUN NN Number=Sing _ _ _ _ 32 II ii NUM CD NumType=Card _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9874 # text = Document 0030011958 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011958 0030011958 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9875 # text = Differential RNA display identifies novel genes associated with decreased vitamin D receptor expression. 1 Differential differential ADJ JJ Degree=Pos _ _ _ _ 2 RNA RNa NOUN NN Number=Sing _ _ _ _ 3 display display NOUN NN Number=Sing _ _ _ _ 4 identifies identify VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 novel novel ADJ JJ Degree=Pos _ _ _ _ 6 genes gene NOUN NNS Number=Plur _ _ _ _ 7 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 vitamin vitamin NOUN NN Number=Sing _ _ _ _ 11 D d NOUN NN Number=Sing _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9876 # text = To characterize further the function of the intracellular vitamin D receptor (VDR), we have developed stable transfectant variants of a vitamin D-responsive cell line (U937) which express either decreased or increased numbers of VDR. 1 To to PART TO _ _ _ _ _ 2 characterize characterize VERB VB VerbForm=Inf _ _ _ _ 3 further further ADV RBR Degree=Cmp _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 function function NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 9 vitamin vitamin NOUN NN Number=Sing _ _ _ _ 10 D d NOUN NN Number=Sing _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 VDR VDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 17 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 developed develop VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 stable stable ADJ JJ Degree=Pos _ _ _ _ 20 transfectant transfectant ADJ JJ Degree=Pos _ _ _ _ 21 variants variant NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 vitamin vitamin NOUN NN Number=Sing _ _ _ _ 25 D- D- PUNCT , _ _ _ _ SpaceAfter=No 26 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 line line NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 U937 U937 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 which which PRON WDT PronType=Rel _ _ _ _ 33 express express ADJ JJ Degree=Pos _ _ _ _ 34 either either CCONJ CC _ _ _ _ _ 35 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 or or CCONJ CC _ _ _ _ _ 37 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 numbers number NOUN NNS Number=Plur _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 VDR VDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 9877 # text = In this study we have analyzed changes in gene expression associated with this variable VDR expression. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 changes change NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 gene gene ADJ JJ Degree=Pos _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 14 variable variable ADJ JJ Degree=Pos _ _ _ _ 15 VDR Vdr NOUN NN Number=Sing _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 9878 # text = Initial experiments indicated that a 50% decrease in VDR levels was associated with a 2-fold increase in cell proliferation and a similar rise in c-myc mRNA expression. 1 Initial initial ADJ JJ Degree=Pos _ _ _ _ 2 experiments experiment NOUN NNS Number=Plur _ _ _ _ 3 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 % % SYM NN Number=Sing _ _ _ _ 8 decrease decrease NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 VDR Vdr ADJ JJ Degree=Pos _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 fold fold NOUN NN Number=Sing _ _ _ _ 19 increase increase NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 similar similar ADJ JJ Degree=Pos _ _ _ _ 26 rise rise NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 c- c- SYM NFP _ _ _ _ SpaceAfter=No 29 myc myc NOUN NN Number=Sing _ _ _ _ 30 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 31 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 9879 # text = Further studies were carried out using differential RNA display (DD). 1 Further further ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 carried carry VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 out out ADP RP _ _ _ _ _ 6 using use VERB VBG VerbForm=Ger _ _ _ _ 7 differential differential ADJ JJ Degree=Pos _ _ _ _ 8 RNA RNa NOUN NN Number=Sing _ _ _ _ 9 display display NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 DD D NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 9880 # text = Sequence analysis of DD products revealed two cDNAs with identity to known gene products: the catalytic sub-unit of DNA-protein kinase (DNA-PK(CS)), and the peroxisomal enzyme 17beta-hydroxysteroid dehydrogenase type IV (17beta-HSD IV). 1 Sequence sequence NOUN NN Number=Sing _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 DD DD PROPN NNP Number=Sing _ _ _ _ 5 products product NOUN NNS Number=Plur _ _ _ _ 6 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 cDNAs cDNA NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 identity identity NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 products product NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 : : PUNCT : _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 catalytic catalytic ADJ JJ Degree=Pos _ _ _ _ 18 sub-unit sub-unit NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 kinase kinase NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 DNA Dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 PK PK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 CS CS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 peroxisomal peroxisomal ADJ JJ Degree=Pos _ _ _ _ 36 enzyme enzyme NOUN NN Number=Sing _ _ _ _ 37 17beta 17beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 hydroxysteroid hydroxysteroid NOUN NN Number=Sing _ _ _ _ 40 dehydrogenase dehydrogenase NOUN NN Number=Sing _ _ _ _ 41 type type NOUN NN Number=Sing _ _ _ _ 42 IV iv PROPN NNP Number=Sing _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 17beta 17beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 HSD Hsd PROPN NNP Number=Sing _ _ _ _ 47 IV iv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 9881 # text = Northern analysis confirmed that expression of both mRNAs was reduced in cells with decreased numbers of VDR. 1 Northern northern ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 confirmed confirm VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 both both DET DT _ _ _ _ _ 8 mRNAs mRNA NOUN NNS Number=Plur _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 numbers number NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 VDR VDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 9882 # text = Down-regulation of 17beta-HSD IV mRNA expression was associated with enhanced estradiol inactivation by U937 cells, suggesting a link between estrogenic pathways and cell proliferation. 1 Down down ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 regulation regulation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 17beta 17beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 HSD Hsd NOUN NN Number=Sing _ _ _ _ 8 IV iv NOUN NN Number=Sing _ _ _ _ 9 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 estradiol estradiol NOUN NN Number=Sing _ _ _ _ 16 inactivation inactivation NOUN NN Number=Sing _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 U937 U937 NUM CD NumType=Card _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 link link NOUN NN Number=Sing _ _ _ _ 24 between between ADP IN _ _ _ _ _ 25 estrogenic estrogenic ADJ JJ Degree=Pos _ _ _ _ 26 pathways pathway NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 9883 # text = Further Northern analyses indicated that there was no significant change in 17beta-HSD IV or DNA-PK(CS) mRNA levels following treatment with 1,25(OH)2D3, although expression of both genes varied with changes in cell proliferation. 1 Further further ADV RB _ _ _ _ _ 2 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 3 analyses analysis NOUN NNS Number=Plur _ _ _ _ 4 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 there there PRON EX _ _ _ _ _ 7 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 no no DET DT _ _ _ _ _ 9 significant significant ADJ JJ Degree=Pos _ _ _ _ 10 change change NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 17beta 17beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 HSD Hsd NOUN NN Number=Sing _ _ _ _ 15 IV iv NOUN NN Number=Sing _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 PK Pk NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 CS CS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 24 levels level NOUN NNS Number=Plur _ _ _ _ 25 following follow VERB VBG VerbForm=Ger _ _ _ _ 26 treatment treatment NOUN NN Number=Sing _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 1,25 1,25 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 OH Oh INTJ UH _ _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 2D3 2D3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 although although SCONJ IN _ _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 both both DET DT _ _ _ _ _ 38 genes gene NOUN NNS Number=Plur _ _ _ _ 39 varied varied VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 with with ADP IN _ _ _ _ _ 41 changes change NOUN NNS Number=Plur _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 cell cell NOUN NN Number=Sing _ _ _ _ 44 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 9884 # text = These data suggest that, in addition to its established role as a hormone-dependent trans-activator, VDR may influence gene expression by ligand-independent mechanisms. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 addition addition NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 10 established establish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 hormone hormone NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 17 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 activator activator NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 VDR VDR PROPN NNP Number=Sing _ _ _ _ 22 may may AUX MD VerbForm=Fin _ _ _ _ 23 influence influence VERB VB VerbForm=Inf _ _ _ _ 24 gene gene ADJ JJ Degree=Pos _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 independent independent ADJ JJ Degree=Pos _ _ _ _ 30 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9885 # text = Document 0030011959 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011959 0030011959 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9886 # text = Mapping of the transcriptional repression domain of the lymphoid-specific transcription factor oct-2A. 1 Mapping mapping NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 repression repression NOUN NN Number=Sing _ _ _ _ 6 domain domain NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 specific specific ADJ JJ Degree=Pos _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 oct oct NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2A 2a NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9887 # text = The lymphoid-specific transcription factor Oct-2a is implicated in B cell-specific transcriptional activity via the octamer motif. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 B b ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ _ 20 via via ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 octamer octamer NOUN NN Number=Sing _ _ _ _ 23 motif. motif. NOUN NN Number=Sing _ _ _ _ # sent_id = 9888 # text = Structure/function analysis of various Oct-2a effector regions in the context of the GAL4 DNA-binding domain revealed that Oct-2a contains two functionally different activation domains at the N and the C termini. 1 Structure structure NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 / / PUNCT , _ _ _ _ SpaceAfter=No 3 function function NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 various various ADJ JJ Degree=Pos _ _ _ _ 7 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 effector effector NOUN NN Number=Sing _ _ _ _ 12 regions region NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 context context NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 GAL4 GAL4 PROPN NNP Number=Sing _ _ _ _ 19 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 binding binding VERB VBG VerbForm=Ger _ _ _ _ 22 domain domain NOUN NN Number=Sing _ _ _ _ 23 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 contains contain NOUN NN Number=Sing _ _ _ _ 30 two two NUM CD NumType=Card _ _ _ _ 31 functionally functionally ADV RB _ _ _ _ _ 32 different different ADJ JJ Degree=Pos _ _ _ _ 33 activation activation NOUN NN Number=Sing _ _ _ _ 34 domains domain NOUN NNS Number=Plur _ _ _ _ 35 at at ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 N N PROPN NNP Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 C C NOUN NN Number=Sing _ _ _ _ 41 termini termini NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 9889 # text = The transcriptional activity of both domains is strongly potentiated by interactions with distinct B cell-specific coactivators. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 3 activity activity NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 both both DET DT _ _ _ _ _ 6 domains domains NOUN NNS Number=Plur _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 strongly strongly ADV RB _ _ _ _ _ 9 potentiated potentiate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 interactions interaction NOUN NNS Number=Plur _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 coactivators coactivator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 9890 # text = Recently, we have identified a repression domain located within the N terminus of Oct-2a (amino acids 2-99). 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 repression repression NOUN NN Number=Sing _ _ _ _ 8 domain domain NOUN NN Number=Sing _ _ _ _ 9 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 within within ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 N N PROPN NNP Number=Sing _ _ _ _ 13 terminus terminus NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 -2 -2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 amino amino NOUN NN Number=Sing _ _ _ _ 20 acids acid NOUN NNS Number=Plur _ _ _ _ 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - SYM SYM _ _ _ _ SpaceAfter=No 23 99 99 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 9891 # text = When this domain was transferred to a potent activator, transcription was strongly inhibited. 1 When when ADV WRB PronType=Int _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 domain domain NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 transferred transfer VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 potent potent NOUN NN Number=Sing _ _ _ _ 9 activator activator NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 strongly strongly ADV RB _ _ _ _ _ 14 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 9892 # text = In this study we present a deletion analysis of the N-terminal region of Oct-2a to determine the minimal repression domain. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 present present VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 deletion deletion NOUN NN Number=Sing _ _ _ _ 8 analysis analysis NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 N- n- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 terminal terminal NOUN NN Number=Sing _ _ _ _ 13 region region NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2a 2a NOUN NN Number=Sing _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 determine determine VERB VB VerbForm=Inf _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 22 repression repression NOUN NN Number=Sing _ _ _ _ 23 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 9893 # text = We identified a stretch of 23 amino acids, rich in serine and threonine residues, which was responsible for most of the repression activity. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 stretch stretch NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 23 23 NUM CD NumType=Card _ _ _ _ 7 amino amino NOUN NN Number=Sing _ _ _ _ 8 acids acid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 rich rich ADJ JJ Degree=Pos _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 serine serine NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 threonine threonine NUM CD NumType=Card _ _ _ _ 15 residues residue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 most most ADJ JJS Degree=Sup _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 repression repression NOUN NN Number=Sing _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 9894 # text = We show that repression is strongly dependent on the type of enhancer present in the reporter plasmid as well as on the cell line tested. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 repression repression NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 strongly strongly ADV RB _ _ _ _ _ 7 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 type type NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 13 present present ADJ JJ Degree=Pos _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 reporter reporter NOUN NN Number=Sing _ _ _ _ 17 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 18 as as ADV RB _ _ _ _ _ 19 well well ADV RB Degree=Pos _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 on on ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 line line NOUN NN Number=Sing _ _ _ _ 25 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 9895 # text = The possibility that Oct-2a can act as an activator and/or a repressor may have important consequences for the function of Oct-2a in B cell differentiation and other developmental processes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 possibility possibility NOUN NN Number=Sing _ _ _ _ 3 that that PRON WDT PronType=Rel _ _ _ _ 4 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 a a NOUN NN Number=Sing _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 act act VERB VB VerbForm=Inf _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 activator activator NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 or or CCONJ CC _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 repressor repressor NOUN NN Number=Sing _ _ _ _ 18 may may AUX MD VerbForm=Fin _ _ _ _ 19 have have VERB VB VerbForm=Inf _ _ _ _ 20 important important ADJ JJ Degree=Pos _ _ _ _ 21 consequences consequence NOUN NNS Number=Plur _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 function function NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 B b ADJ JJ Degree=Pos _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 other other ADJ JJ Degree=Pos _ _ _ _ 36 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 37 processes process NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9896 # text = Document 0030011964 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011964 0030011964 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9897 # text = The tumour associated cell surface antigen A6H is costimulatory for human CD4+ but not CD8+ T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 tumour tumour NOUN NN Number=Sing _ _ _ _ 3 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 surface surface NOUN NN Number=Sing _ _ _ _ 6 antigen antigen NOUN NN Number=Sing _ _ _ _ 7 A6H A6h NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 + + SYM SYM _ _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 not not ADV RB _ _ _ _ _ 16 CD8 CD8 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 + + SYM SYM _ _ _ _ _ 18 T t NUM CD NumType=Card _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9898 # text = The A6H monoclonal antibody (mAb) recognizes a 120,000-140,000 MW antigen that is expressed at similar densities on 85-90% of human CD4+ and CD8+ T cells and on renal cell carcinomas. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 A6 a6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 H h PROPN NNP Number=Sing _ _ _ _ 4 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 5 antibody antibody NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 mAb mAb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 recognizes recognize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 120,000 120,000 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 140,000 140,000 NUM CD NumType=Card _ _ _ _ 14 MW Mw ADJ JJ Degree=Pos _ _ _ _ 15 antigen antigen NOUN NNS Number=Plur _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 at at ADP IN _ _ _ _ _ 20 similar similar ADJ JJ Degree=Pos _ _ _ _ 21 densities density NOUN NNS Number=Plur _ _ _ _ 22 on on ADP IN _ _ _ _ _ 23 85 85 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - SYM SYM _ _ _ _ SpaceAfter=No 25 90 90 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 % % SYM NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 + + SYM SYM _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 CD8 CD8 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 + + SYM SYM _ _ _ _ _ 34 T t NUM CD NumType=Card _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 on on ADP IN _ _ _ _ _ 38 renal renal ADJ JJ Degree=Pos _ _ _ _ 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 carcinomas carcinoma NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 9899 # text = The binding of the A6H mAb induced a costimulatory signal in anti-CD3 activated T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 binding binding NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 A6 a6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 H H PROPN NNP Number=Sing _ _ _ _ 7 mAb mAb PROPN NNP Number=Sing _ _ _ _ 8 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 11 signal signal NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 14 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 T t NUM CD NumType=Card _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 9900 # text = In the present report, we show that A6H costimulated cell proliferation and cytokine production in purified CD4+ T cells. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 A6H A6h DET DT _ _ _ _ _ 10 costimulated costimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 15 production production NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 purified purified ADJ JJ Degree=Pos _ _ _ _ 18 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 + + SYM SYM _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 9901 # text = Unexpectedly, the CD8+ T-cell subpopulation failed to respond. 1 Unexpectedly unexpectedly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 CD8 CD8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 + + SYM SYM _ _ _ _ _ 6 T- T- SYM NFP _ _ _ _ SpaceAfter=No 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 subpopulation subpopulation NOUN NN Number=Sing _ _ _ _ 9 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 respond respond VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 9902 # text = CD4+ T cells costimulated with the A6H mAb upregulated CD80, CD86, CD71, interleukin-2 (IL-2)R alpha, IL-2R beta and IL-2R gamma, while no corresponding up-regulation of these cell surface molecules was seen in CD8+ T cells. 1 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 + + SYM SYM _ _ _ _ _ 3 T t NUM CD NumType=Card _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 costimulated costimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 A6 a6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 H H PROPN NNP Number=Sing _ _ _ _ 10 mAb mAb PROPN NNP Number=Sing _ _ _ _ 11 upregulated upregulate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 CD80 CD80 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 CD86 CD86 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 CD71 CD71 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 X LS _ _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 R r PROPN NNP Number=Sing _ _ _ _ 27 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2R 2R PROPN NNP Number=Sing _ _ _ _ 32 beta beta PROPN NNP Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 2R 2r PROPN NNP Number=Sing _ _ _ _ 37 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 while while SCONJ IN _ _ _ _ _ 40 no no DET DT _ _ _ _ _ 41 corresponding corresponding NOUN NN Number=Sing _ _ _ _ 42 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 regulation regulation NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 47 cell cell NOUN NN Number=Sing _ _ _ _ 48 surface surface NOUN NN Number=Sing _ _ _ _ 49 molecules molecule NOUN NNS Number=Plur _ _ _ _ 50 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 51 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 52 in in ADP IN _ _ _ _ _ 53 CD8 CD8 NUM CD NumType=Card _ _ _ SpaceAfter=No 54 + + SYM SYM _ _ _ _ _ 55 T t NUM CD NumType=Card _ _ _ _ 56 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 9903 # text = In order to investigate the nature of the A6H mAb costimulus at the transcriptional level we have examined induction of the transcription factors OCT-1, AP-1 and NF-kappa B which are known to be transcriptional regulators of several cytokine and cytokine receptor genes, including the IL-2 and IL-2R genes. 1 In in ADP IN _ _ _ _ _ 2 order order NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 nature nature NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 A6 a6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 H H PROPN NNP Number=Sing _ _ _ _ 11 mAb mAb PROPN NNP Number=Sing _ _ _ _ 12 costimulus costimulus NOUN NN Number=Sing _ _ _ _ 13 at at ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 16 level level NOUN NN Number=Sing _ _ _ _ 17 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 18 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 induction induction NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factors factor NOUN NNS Number=Plur _ _ _ _ 25 OCT Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappa kappa NOUN NN Number=Sing _ _ _ _ 35 B b NOUN NN Number=Sing _ _ _ _ 36 which which PRON WDT PronType=Rel _ _ _ _ 37 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 38 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 to to PART TO _ _ _ _ _ 40 be be AUX VB VerbForm=Inf _ _ _ _ 41 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 42 regulators regulator NOUN NNS Number=Plur _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 several several ADJ JJ Degree=Pos _ _ _ _ 45 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 48 receptor receptor NOUN NN Number=Sing _ _ _ _ 49 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 , , PUNCT , _ _ _ _ _ 51 including include VERB VBG VerbForm=Ger _ _ _ _ 52 the the DET DT Definite=Def|PronType=Art _ _ _ _ 53 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 2 2 NUM CD NumType=Card _ _ _ _ 56 and and CCONJ CC _ _ _ _ _ 57 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 59 2R 2r NOUN NN Number=Sing _ _ _ _ 60 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ _ # sent_id = 9904 # text = Co-ligation of the A6H antigen and the CD3 complex induced expression of the transcription factor AP-1 in CD4+ T cells, whereas no increase in NF-kappa B and octamer-binding (Oct) proteins was seen compared to T cells stimulated with anti-CD3 alone. 1 Co co PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -ligation -ligation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 A6 A6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 H h PROPN NNP Number=Sing _ _ _ _ 7 antigen antigen NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 11 complex complex NOUN NN Number=Sing _ _ _ _ 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 + + SYM SYM _ _ _ _ _ 24 T t NUM CD NumType=Card _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 whereas whereas SCONJ IN _ _ _ _ _ 28 no no DET DT _ _ _ _ _ 29 increase increase NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappa kappa NOUN NN Number=Sing _ _ _ _ 34 B b NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 binding binding VERB VBG VerbForm=Ger _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 proteins protein NOUN NNS Number=Plur _ _ _ _ 43 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 44 seen see AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 45 compared compare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 46 to to ADP IN _ _ _ _ _ 47 T t PROPN NNP Number=Sing _ _ _ _ 48 cells cell NOUN NNS Number=Plur _ _ _ _ 49 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 with with ADP IN _ _ _ _ _ 51 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 52 alone alone ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 9905 # text = Furthermore, no induction of AP-1 was seen in A6H costimulated CD8+ T cells. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 no no DET DT _ _ _ _ _ 4 induction induction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 A6H A6h PROPN NNP Number=Sing _ _ _ _ 13 costimulated costimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 CD8 CD8 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 + + SYM SYM _ _ _ _ _ 16 T t NUM CD NumType=Card _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 9906 # text = These results suggests that both proximal steps in CD8+ T-cell activation as well as the later phases are unresponsive to A6H ligation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 both both DET DT _ _ _ _ _ 6 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 7 steps step NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 CD8 CD8 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 + + SYM SYM _ _ _ _ _ 11 T- T- SYM SYM _ _ _ _ SpaceAfter=No 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 as as ADV RB _ _ _ _ _ 15 well well ADV RB Degree=Pos _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 later later ADJ JJR Degree=Cmp _ _ _ _ 19 phases phase NOUN NNS Number=Plur _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 unresponsive unresponsive ADJ JJ Degree=Pos _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 A6H A6h DET DT _ _ _ _ _ 24 ligation ligation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 9907 # text = Molecular differences of the A6H molecule or distinct regulation of the A6H transduced AP-1 activation pathway may exist in CD4+ and CD8+ T cell subpopulations. 1 Molecular Molecular ADJ JJ Degree=Pos _ _ _ _ 2 differences difference NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 A6 A6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 H h PROPN NNP Number=Sing _ _ _ _ 7 molecule molecule NOUN NN Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 10 regulation regulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 A6H A6h ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 14 transduced transduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 pathway pathway NOUN NN Number=Sing _ _ _ _ 20 may may AUX MD VerbForm=Fin _ _ _ _ 21 exist exist VERB VB VerbForm=Inf _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 + + SYM SYM _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 CD8 CD8 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 + + SYM SYM _ _ _ _ _ 28 T t NUM CD NumType=Card _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 subpopulations subpopulation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9908 # text = Document 0030011965 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011965 0030011965 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9909 # text = Regulation of cell-type-specific interleukin-2 receptor alpha-chain gene expression: potential role of physical interactions between Elf-1, HMG-I(Y), and NF-kappa B family proteins. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 type- type- PUNCT : _ _ _ _ SpaceAfter=No 6 specific specific ADJ JJ Degree=Pos _ _ _ _ 7 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 chain chain NOUN NN Number=Sing _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 : : PUNCT : _ _ _ _ _ 17 potential potential ADJ JJ Degree=Pos _ _ _ _ 18 role role NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 physical physical ADJ JJ Degree=Pos _ _ _ _ 21 interactions interaction NOUN NNS Number=Plur _ _ _ _ 22 between between ADP IN _ _ _ _ _ 23 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 HMG Hmg INTJ UH _ _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 Y y X FW Foreign=Yes _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 kappa kappa X FW Foreign=Yes _ _ _ _ 37 B b ADJ JJ Degree=Pos _ _ _ _ 38 family family NOUN NN Number=Sing _ _ _ _ 39 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9910 # text = The interleukin 2 receptor alpha-chain (IL-2R alpha) gene is rapidly and potently induced in T cells in response to mitogenic stimuli. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 3 2 2 NUM CD NumType=Card _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ _ 5 alpha-chain alpha-chain NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2R 2r NOUN NN Number=Sing _ _ _ _ 10 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 rapidly rapidly ADV RB _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 potently potently ADV RB _ _ _ _ _ 17 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 response response NOUN NN Number=Sing _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 25 stimuli stimuli NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 9911 # text = Previously, an inducible enhancer between nucleotides -299 and -228 that contains NF-kappa B and CArG motifs was identified. 1 Previously previously ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 5 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 6 between between ADP IN _ _ _ _ _ 7 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 299 299 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 - - SYM SYM _ _ _ _ SpaceAfter=No 12 228 228 NUM CD NumType=Card _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 CArG Carg NOUN NN Number=Sing _ _ _ _ 21 motifs motif NOUN NNS Number=Plur _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 9912 # text = We now report the characterization of a second essential positive regulatory element located between nucleotides -137 and -64 that binds Elf-1 and HMG-I(Y). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 now now ADV RB _ _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 characterization characterization NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 9 essential essential NOUN NN Number=Sing _ _ _ _ 10 positive positive ADJ JJ Degree=Pos _ _ _ _ 11 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ _ 13 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 between between ADP IN _ _ _ _ _ 15 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 137 137 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 - - SYM SYM _ _ _ _ SpaceAfter=No 20 64 64 NUM CD NumType=Card _ _ _ _ 21 that that PRON WDT PronType=Rel _ _ _ _ 22 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 HMG Hmg NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 Y y PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 9913 # text = This element had maximal activity in lymphoid cells, paralleling the cell type specificity of Elf-1 expression. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 element element NOUN NN Number=Sing _ _ _ _ 3 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 paralleling parallel VERB VBG VerbForm=Ger _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 type type NOUN NN Number=Sing _ _ _ _ 14 specificity specificity NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 9914 # text = Transcription from the IL-2R alpha promoter was inhibited when either the Elf-1 or the HMG-I(Y) binding site was mutated. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 from from ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2R 2R PROPN NNP Number=Sing _ _ _ _ 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 when when ADV WRB PronType=Int _ _ _ _ 12 either either CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 -1 -1 NUM CD NumType=Card _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 HMG Hmg NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 Y y X FW Foreign=Yes _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 binding bind VERB VBG VerbForm=Ger _ _ _ _ 25 site site NOUN NN Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 mutated mutate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 9915 # text = Coexpression of both proteins activated transcription of the -137 to -64 element in COS-7 cells. 1 Coexpression Coexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 both both DET DT _ _ _ _ _ 4 proteins protein NOUN NNS Number=Plur _ _ _ _ 5 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 - - SYM SYM _ _ _ _ SpaceAfter=No 10 137 137 NUM CD NumType=Card _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 64 64 NUM CD NumType=Card _ _ _ _ 14 element element NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 COS COS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 7 7 NUM CD NumType=Card _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 9916 # text = Elf-1 physically associated with HMG-I and with NF-kappa B p50 and c-Rel in vitro, suggesting that protein-protein interactions might functionally coordinate the actions of the upstream and downstream positive regulatory elements. 1 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 physically physically ADV RB _ _ _ _ _ 5 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 HMG HMG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 p50 p50 NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 Rel Rel NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 27 protein protein NOUN NN Number=Sing _ _ _ _ 28 interactions interaction NOUN NNS Number=Plur _ _ _ _ 29 might might AUX MD VerbForm=Fin _ _ _ _ 30 functionally functionally ADV RB _ _ _ _ _ 31 coordinate coordinate VERB VB VerbForm=Inf _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 actions action NOUN NNS Number=Plur _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 39 positive positive ADJ JJ Degree=Pos _ _ _ _ 40 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 41 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 9917 # text = This is the first report of a physical interaction between an Ets family member and NF-kappa B family proteins. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 5 report report NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 physical physical ADJ JJ Degree=Pos _ _ _ _ 9 interaction interaction NOUN NN Number=Sing _ _ _ _ 10 between between ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 Ets Ets PROPN NNPS Number=Plur _ _ _ _ 13 family family NOUN NN Number=Sing _ _ _ _ 14 member member NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ _ 20 family family NOUN NN Number=Sing _ _ _ _ 21 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 9918 # text = These findings provide significant new insights into the protein-protein and protein-DNA interactions that regulate cell-type-specific and inducible IL-2R alpha gene expression and also have implications for other genes regulated by Elf-1 and NF-kappa B family proteins. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 significant significant ADJ JJ Degree=Pos _ _ _ _ 5 new new ADJ JJ Degree=Pos _ _ _ _ 6 insights insight NOUN NNS Number=Plur _ _ _ _ 7 into into ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 DNA dna NOUN NN Number=Sing _ _ _ _ 15 interactions interaction NOUN NNS Number=Plur _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 -type-specific -type-specific ADJ JJ Degree=Pos _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 22 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 X LS _ _ _ _ SpaceAfter=No 25 R r X GW _ _ _ _ _ 26 alpha alpha X GW _ _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 also also ADV RB _ _ _ _ _ 31 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 32 implications implication NOUN NNS Number=Plur _ _ _ _ 33 for for ADP IN _ _ _ _ _ 34 other other ADJ JJ Degree=Pos _ _ _ _ 35 genes gene NOUN NNS Number=Plur _ _ _ _ 36 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 by by ADP IN _ _ _ _ _ 38 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 1 1 NUM CD NumType=Card _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 kappa kappa NOUN NN Number=Sing _ _ _ _ 45 B b NOUN NN Number=Sing _ _ _ _ 46 family family NOUN NN Number=Sing _ _ _ _ 47 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9919 # text = Document 0030011968 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011968 0030011968 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9920 # text = LMP-1 activates NF-kappa B by targeting the inhibitory molecule I kappa B alpha. 1 LMP Lmp SYM NFP _ _ _ _ SpaceAfter=No 2 - - SYM SYM _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 activates activate NOUN NNS Number=Plur _ _ _ _ 5 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 by by SCONJ IN _ _ _ _ _ 10 targeting target VERB VBG VerbForm=Ger _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 13 molecule molecule NOUN NN Number=Sing _ _ _ _ 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B B PROPN NNP Number=Sing _ _ _ _ 17 alpha. alpha. NOUN NN Number=Sing _ _ _ SpacesAfter=\s\n # sent_id = 9921 # text = LMP-1, an Epstein-Barr virus membrane protein expressed during latent infection, has oncogenic properties, as judged from its ability to transform B lymphocytes and rodent fibroblasts. 1 LMP Lmp SYM NFP _ _ _ _ SpaceAfter=No 2 - - SYM SYM _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 Barr Barr PROPN NNP Number=Sing _ _ _ _ 9 virus virus NOUN NN Number=Sing _ _ _ _ 10 membrane membrane NOUN NN Number=Sing _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 during during ADP IN _ _ _ _ _ 14 latent latent ADJ JJ Degree=Pos _ _ _ _ 15 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 oncogenic oncogenic ADJ JJ Degree=Pos _ _ _ _ 19 properties property NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 as as SCONJ IN _ _ _ _ _ 22 judged judged VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 25 ability ability NOUN NN Number=Sing _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 transform transform VERB VB VerbForm=Inf _ _ _ _ 28 B b ADJ JJ Degree=Pos _ _ _ _ 29 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 rodent rodent ADJ JJ Degree=Pos _ _ _ _ 32 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 9922 # text = LMP-1 induces the expression of bcl2, an oncogene which protects cells from apoptosis, as well as of genes encoding other proteins involved in cell regulation and growth control. 1 LMP Lmp SYM NFP _ _ _ _ SpaceAfter=No 2 - - SYM SYM _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 induces induce NOUN NNS Number=Plur _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 bcl2 bcl2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 oncogene oncogene NOUN NN Number=Sing _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 protects protect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 as as ADV RB _ _ _ _ _ 19 well well ADV RB Degree=Pos _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 genes gene NOUN NNS Number=Plur _ _ _ _ 23 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 24 other other ADJ JJ Degree=Pos _ _ _ _ 25 proteins protein NOUN NNS Number=Plur _ _ _ _ 26 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 regulation regulation NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 growth growth NOUN NN Number=Sing _ _ _ _ 32 control control NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 9923 # text = The mechanisms by which LMP-1 upregulates these proteins is unknown, but it is plausible that LMP-1 modifies signal transduction pathways that result in the activation of one or more transcription factors that ultimately regulate transcription of oncogenic genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 which which DET WDT PronType=Int _ _ _ _ 5 LMP LMP NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 upregulates upregulate NOUN NNS Number=Plur _ _ _ _ 9 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 plausible plausible ADJ JJ Degree=Pos _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 LMP LMP NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 modifies modify NOUN NNS Number=Plur _ _ _ _ 23 signal signal NOUN NN Number=Sing _ _ _ _ 24 transduction transduction NOUN NN Number=Sing _ _ _ _ 25 pathways pathway NOUN NNS Number=Plur _ _ _ _ 26 that that PRON WDT PronType=Rel _ _ _ _ 27 result result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 one one NUM CD NumType=Card _ _ _ _ 33 or or CCONJ CC _ _ _ _ _ 34 more more ADJ JJR Degree=Cmp _ _ _ _ 35 transcription transcription NOUN NN Number=Sing _ _ _ _ 36 factors factor NOUN NNS Number=Plur _ _ _ _ 37 that that PRON WDT PronType=Rel _ _ _ _ 38 ultimately ultimately ADV RB _ _ _ _ _ 39 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 40 transcription transcription NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 oncogenic oncogenic ADJ JJ Degree=Pos _ _ _ _ 43 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 9924 # text = NF-kappa B, a transcription factor controlling the expression of genes involved in cell activation and growth control, has been shown to be activated by LMP-1. 1 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa PROPN NNP Number=Sing _ _ _ _ 4 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 controlling controlle VERB VBG VerbForm=Ger _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 involved involved VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 growth growth NOUN NN Number=Sing _ _ _ _ 20 control control NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 24 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 be be AUX VB VerbForm=Inf _ _ _ _ 27 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 LMP LMP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 9925 # text = The mechanism(s) regulating this activation remains unknown. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 s s X AFX _ _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 9926 # text = Our data indicate that increased NF-kappa B DNA binding and functional activity are present in B-lymphoid cells stably or transiently expressing LMP-1. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ _ 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 functional functional ADJ JJ Degree=Pos _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 present present ADJ JJ Degree=Pos _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 B b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 stably stably ADV RB _ _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 transiently transiently ADV RB _ _ _ _ _ 25 expressing express VERB VBG VerbForm=Ger _ _ _ _ 26 LMP LMP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 9927 # text = I kappa B alpha is selectively modified in LMP-1-expressing B cells. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa X FW Foreign=Yes _ _ _ _ 3 B b ADJ JJ Degree=Pos _ _ _ _ 4 alpha alpha NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 selectively selectively ADV RB _ _ _ _ _ 7 modified modify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 LMP LMP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 14 B b ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 9928 # text = A phosphorylated form of I kappa B alpha and increased protein turnover-degradation correlate with increased NF-kappa B nuclear translocation. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 form form NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B B PROPN NNP Number=Sing _ _ _ _ 8 alpha alpha PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 turnover turnover NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 degradation degradation NOUN NN Number=Sing _ _ _ _ 15 correlate correlate NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa PROPN NNP Number=Sing _ _ _ _ 21 B b PROPN NNP Number=Sing _ _ _ _ 22 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 23 translocation translocation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 9929 # text = This results in increased transcription of NF-kappa B-dependent-genes, including those encoding p105 and I kappa B alpha (MAD3). 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 including include VERB VBG VerbForm=Ger _ _ _ _ 17 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 18 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 19 p105 p105 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 22 kappa kappa PROPN NNP Number=Sing _ _ _ _ 23 B B PROPN NNP Number=Sing _ _ _ _ 24 alpha alpha PROPN NNP Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 MAD3 MAD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 9930 # text = These results indicate that LMP-1 activates NF-kappa B in B-cell lines by targeting I kappa B alpha. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 LMP LMP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 activates activate NOUN NNS Number=Plur _ _ _ _ 9 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 B b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 lines line NOUN NNS Number=Plur _ _ _ _ 18 by by SCONJ IN _ _ _ _ _ 19 targeting targete VERB VBG VerbForm=Ger _ _ _ _ 20 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 21 kappa kappa PROPN NNP Number=Sing _ _ _ _ 22 B b PROPN NNP Number=Sing _ _ _ _ 23 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 9931 # text = Identification of the pathways activated by LMP-1 to result in posttranslational modifications of I kappa B alpha will aid in determining the role of this virus-host cell protein interaction in Epstein-Barr virus-mediated oncogenesis. 1 Identification identification NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 pathways pathway NOUN NNS Number=Plur _ _ _ _ 5 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 LMP LMP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 result result VERB VB VerbForm=Inf _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 posttranslational posttranslational ADJ JJ Degree=Pos _ _ _ _ 14 modifications modification NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 alpha alpha NOUN NN Number=Sing _ _ _ _ 20 will will AUX MD VerbForm=Fin _ _ _ _ 21 aid aid VERB VB VerbForm=Inf _ _ _ _ 22 in in SCONJ IN _ _ _ _ _ 23 determining determine VERB VBG VerbForm=Ger _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 role role NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 host host NOUN NN Number=Sing _ _ _ _ 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 protein protein NOUN NN Number=Sing _ _ _ _ 33 interaction interaction NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 Barr Barr PROPN NNP Number=Sing _ _ _ _ 38 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 oncogenesis oncogenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9932 # text = Document 0030011975 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011975 0030011975 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9933 # text = Granulocyte colony-stimulating factor activates a 72-kDa isoform of STAT3 in human neutrophils. 1 Granulocyte Granulocyte PROPN NNP Number=Sing _ _ _ _ 2 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 stimulating stimulating NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 72 72 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kDa kDa NOUN NN Number=Sing _ _ _ _ 11 isoform isoform NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 STAT3 STAT3 NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9934 # text = Granulocyte colony-stimulating factor (G-CSF) signaling involves activation of STATs, proteins that serve the dual function of signal transduction and activation of transcription. 1 Granulocyte Granulocyte PROPN NNP Number=Sing _ _ _ _ 2 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 stimulating stimulating NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 G- G- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 CSF CSF NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 signaling signaling VERB VBG VerbForm=Ger _ _ _ _ 11 involves involve NOUN NNS Number=Plur _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 STATs STAT NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 proteins protein NOUN NNS Number=Plur _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 serve serve VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 dual dual ADJ JJ Degree=Pos _ _ _ _ 21 function function NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 signal signal NOUN NN Number=Sing _ _ _ _ 24 transduction transduction NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 9935 # text = We previously demonstrated that G-CSF activated a distinct Stat3-like protein in immature and mature normal myeloid cells, StatG. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 previously previously ADV RB _ _ _ _ _ 3 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 G- G- SYM NFP _ _ _ _ SpaceAfter=No 6 CSF CSF PROPN NNP Number=Sing _ _ _ _ 7 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 10 Stat3 Stat3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 like like ADJ JJ Degree=Pos _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 immature immature ADJ JJ Degree=Pos _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 mature mature ADJ JJ Degree=Pos _ _ _ _ 18 normal normal ADJ JJ Degree=Pos _ _ _ _ 19 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 StatG StatG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 9936 # text = StatG in normal immature human myeloid cells, i.e. adult CD34+ bone marrow cells, was composed of Stat3beta. 1 StatG Statg PRON NN Number=Sing _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 normal normal ADJ JJ Degree=Pos _ _ _ _ 4 immature immature ADJ JJ Degree=Pos _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 i.e. i.e. X FW _ _ _ _ _ 10 adult adult ADJ JJ Degree=Pos _ _ _ _ 11 CD34 CD34 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 + + SYM SYM _ _ _ _ _ 13 bone bone NOUN NN Number=Sing _ _ _ _ 14 marrow marrow NOUN NN Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 Stat3 Stat3 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 9937 # text = This investigation was undertaken to determine the composition of StatG in mature normal human myeloid cells, i.e. polymorphonuclear neutrophilic granulocytes (PMN). 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 investigation investigation NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 undertaken undertaken ADJ JJ Degree=Pos _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 determine determine VERB VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 composition composition NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 StatG Statg PROPN NNP Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 mature mature ADJ JJ Degree=Pos _ _ _ _ 13 normal normal ADJ JJ Degree=Pos _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 i.e. i.e. X FW _ _ _ _ _ 19 polymorphonuclear polymorphonuclear ADJ JJ Degree=Pos _ _ _ _ 20 neutrophilic neutrophilic ADJ JJ Degree=Pos _ _ _ _ 21 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 PMN Pmn NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 9938 # text = These studies revealed that the major protein in extracts of PMN activated by G-CSF to bind the high-affinity serum-inducible element (hSIE) is a 72-kDa protein that cross-reacts with Stat3 monoclonal antibody, which we have designated Stat3gamma. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 major major ADJ JJ Degree=Pos _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 extracts extract NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 PMN PMN PROPN NNP Number=Sing _ _ _ _ 12 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 G- G- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 CSF CSF PROPN NNP Number=Sing _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 bind bind VERB VB VerbForm=Inf _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 affinity affinity NOUN NN Number=Sing _ _ _ _ 22 serum serum NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 25 element element NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 hSIE hsie NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 72 72 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kDa kDa NOUN NN Number=Sing _ _ _ _ 34 protein protein NOUN NN Number=Sing _ _ _ _ 35 that that PRON WDT PronType=Rel _ _ _ _ 36 cross-reacts cross-react VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 Stat3 Stat3 NUM CD NumType=Card _ _ _ _ 39 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 40 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 which which PRON WDT PronType=Rel _ _ _ _ 43 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 44 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 45 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 Stat3 Stat3 NUM CD NumType=Card _ _ _ SpaceAfter=No 47 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 9939 # text = Stat3gamma is derived from Stat3alpha by limited proteolysis and lacks the carboxyl-terminal portion of Stat3alpha. 1 Stat3 Stat3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 gamma gamma NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 derived derive VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 Stat3 Stat3 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 limited limited ADJ JJ Degree=Pos _ _ _ _ 10 proteolysis proteolysis NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 lacks lack VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 carboxyl carboxyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 17 portion portion NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 Stat3 Stat3 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 9940 # text = Because this region of Stat3alpha is involved in transcriptional activation, our findings suggest the possibility that Stat3gamma may be transcriptionally inactive and may compete with Stat3alpha for Stat3 binding sites in these terminally differentiated myeloid cells. 1 Because because SCONJ IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 region region NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Stat3 Stat3 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 involved involved ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 14 findings finding NOUN NNS Number=Plur _ _ _ _ 15 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 possibility possibility NOUN NN Number=Sing _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 Stat3 Stat3 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 gamma gamma NOUN NN Number=Sing _ _ _ _ 21 may may AUX MD VerbForm=Fin _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 transcriptionally transcriptionally ADV RB _ _ _ _ _ 24 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 may may AUX MD VerbForm=Fin _ _ _ _ 27 compete compete VERB VB VerbForm=Inf _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 Stat3 Stat3 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 alpha alpha NOUN NN Number=Sing _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 Stat3 Stat3 NUM CD NumType=Card _ _ _ _ 33 binding binding VERB VBG VerbForm=Ger _ _ _ _ 34 sites site NOUN NNS Number=Plur _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 37 terminally terminally ADV RB _ _ _ _ _ 38 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9941 # text = Document 0030011978 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011978 0030011978 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9942 # text = NF-kappa B-independent suppression of HIV expression by ascorbic acid. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 independent independent ADJ JJ Degree=Pos _ _ _ _ 7 suppression suppression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 HIV HIV PROPN NNP Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 ascorbic ascorbic ADJ JJ Degree=Pos _ _ _ _ 13 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9943 # text = Ascorbic acid (ascorbate or vitamin C) has been shown to suppress the induction of HIV in latently infected T lymphocytic cells following stimulation with a tumor promoter (PMA) and inflammatory cytokine (TNF-alpha). 1 Ascorbic Ascorbic ADJ JJ Degree=Pos _ _ _ _ 2 acid acid NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 ascorbate ascorbate NOUN NN Number=Sing _ _ _ _ 5 or or CCONJ CC _ _ _ _ _ 6 vitamin vitamin NOUN NN Number=Sing _ _ _ _ 7 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 11 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 induction induction NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 HIV HIV PROPN NNP Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 latently latently ADV RB _ _ _ _ _ 20 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 lymphocytic lymphocytic ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 following follow VERB VBG VerbForm=Ger _ _ _ _ 25 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 tumor tumor NOUN NN Number=Sing _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 35 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 9944 # text = To assess whether this inhibition was mediated via modulation of the cellular transcription factor, NF-kappa B, we carried out gel shift analysis on nuclear extracts prepared under different conditions of cell stimulation in the presence or absence of ascorbate, N-acetylcysteine (NAC), or zidovudine (AZT). 1 To to PART TO _ _ _ _ _ 2 assess assess VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 via via ADP IN _ _ _ _ _ 9 modulation modulation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 22 carried carry VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 out out ADP RP _ _ _ _ _ 24 gel gel NOUN NN Number=Sing _ _ _ _ 25 shift shift NOUN NN Number=Sing _ _ _ _ 26 analysis analysis NOUN NN Number=Sing _ _ _ _ 27 on on ADP IN _ _ _ _ _ 28 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 29 extracts extract NOUN NNS Number=Plur _ _ _ _ 30 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 under under ADP IN _ _ _ _ _ 32 different different ADJ JJ Degree=Pos _ _ _ _ 33 conditions condition NOUN NNS Number=Plur _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ _ 36 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 presence presence NOUN NN Number=Sing _ _ _ _ 40 or or CCONJ CC _ _ _ _ _ 41 absence absence NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 ascorbate ascorbate NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 acetylcysteine acetylcysteine NOUN NN Number=Sing _ _ _ _ 47 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 48 NAC NAC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 50 , , PUNCT , _ _ _ _ _ 51 or or CCONJ CC _ _ _ _ _ 52 zidovudine zidovudine NOUN NN Number=Sing _ _ _ _ 53 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 54 AZT AZT NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 9945 # text = Pretreatment of ACH-2 T cells by NAC followed by stimulation with PMA, TNF-alpha, or hydrogen peroxide (H2O2) resulted in strong suppression of NF-kappa B activation. 1 Pretreatment Pretreatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 ACH ACH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 NAC NAC PROPN NNP Number=Sing _ _ _ _ 10 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 hydrogen hydrogen VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 peroxide peroxide NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 H2 H2 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 O2 O2 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 strong strong ADJ JJ Degree=Pos _ _ _ _ 30 suppression suppression NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappa kappa NOUN NN Number=Sing _ _ _ _ 35 B b NOUN NN Number=Sing _ _ _ _ 36 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 9946 # text = In contrast, neither ascorbate nor AZT affected NF-kappa B activity under all three induction conditions in the ACH-2 cell line. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 neither neither CCONJ CC _ _ _ _ _ 5 ascorbate ascorbate ADJ JJ Degree=Pos _ _ _ _ 6 nor nor CCONJ CC _ _ _ _ _ 7 AZT Azt ADV RB _ _ _ _ _ 8 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 under under ADP IN _ _ _ _ _ 15 all all DET DT _ _ _ _ _ 16 three three NUM CD NumType=Card _ _ _ _ 17 induction induction NOUN NN Number=Sing _ _ _ _ 18 conditions condition NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 ACH ACh NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 9947 # text = Ascorbate and AZT also had no effect on NF-kappa B activation following TNF-alpha- or PMA-induced stimulation of U1 promonocytic cells. 1 Ascorbate Ascorbate PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 AZT AZT PROPN NNP Number=Sing _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 no no DET DT _ _ _ _ _ 7 effect effect NOUN NN Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 following follow VERB VBG VerbForm=Ger _ _ _ _ 15 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 PMA Pma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 U1 U1 NUM CD NumType=Card _ _ _ _ 26 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 9948 # text = These results suggest that the molecular mechanism of HIV inhibition by ascorbate is not mediated via NF-kappa B inhibition, unlike that seen with other antioxidants. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 7 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 HIV Hiv NOUN NN Number=Sing _ _ _ _ 10 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 ascorbate ascorbate NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 via via ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 inhibition inhibition NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 unlike unlike ADP IN _ _ _ _ _ 24 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 25 seen see NOUN NN Number=Sing _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 other other ADJ JJ Degree=Pos _ _ _ _ 28 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9949 # text = Document 0030011989 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011989 0030011989 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9950 # text = Stat6 inhibits human interleukin-4 promoter activity in T cells. 1 Stat6 Stat6 NUM CD NumType=Card _ _ _ _ 2 inhibits inhibits NOUN NNS Number=Plur _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 4 4 NUM CD NumType=Card _ _ _ _ 7 promoter promoter NOUN NN Number=Sing _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9951 # text = The differentiation of naive T-helper (Th) cells into cytokine-secreting effector 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 naive naive ADJ JJ Degree=Pos _ _ _ _ 5 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 helper helper NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 Th th NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 into into ADP IN _ _ _ _ _ 12 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 secreting secreting NOUN NN Number=Sing _ _ _ _ 15 effector effector NOUN NN Number=Sing _ _ _ _ # sent_id = 9952 # text = Th cells requires exposure to multiple signals, including exogenous cytokines. 1 Th th ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 exposure exposure NOUN NN Number=Sing _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 7 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 including include VERB VBG VerbForm=Ger _ _ _ _ 10 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 11 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 9953 # text = Interleukin-4 (IL-4) plays a major role in this process by promoting the differentiation of IL-4-secreting Th2 cells. 1 Interleukin Interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 major major ADJ JJ Degree=Pos _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 15 process process NOUN NN Number=Sing _ _ _ _ 16 by by SCONJ IN _ _ _ _ _ 17 promoting promote VERB VBG VerbForm=Ger _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 secreting secreting VERB VBG VerbForm=Ger _ _ _ _ 26 Th2 Th2 NUM CD NumType=Card _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 9954 # text = In Th2 cells, IL-4 gene expression is tightly controlled at the level of transcription by the coordinated binding of multiple transcription factors to regulatory elements in the proximal promoter region. 1 In in ADP IN _ _ _ _ _ 2 Th2 Th2 NUM CD NumType=Card _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 4 4 NUM CD NumType=Card _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 tightly tightly ADV RB _ _ _ _ _ 12 controlled controll VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 at at ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 level level NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 coordinated coordinate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 binding binding NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 factors factor NOUN NNS Number=Plur _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 28 elements element NOUN NNS Number=Plur _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 32 promoter promoter NOUN NN Number=Sing _ _ _ _ 33 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 9955 # text = Nuclear factor of activated T cell (NFAT) family members play a critical role in regulating IL-4 transcription and interact with up to five sequences (termed P0 through P4) in the IL-4 promoter. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 T T PROPN NNP Number=Sing _ _ _ _ 6 cell cell PROPN NNP Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 family family NOUN NN Number=Sing _ _ _ _ 11 members member NOUN NNS Number=Plur _ _ _ _ 12 play play VERB VB VerbForm=Inf _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 critical critical ADJ JJ Degree=Pos _ _ _ _ 15 role role NOUN NN Number=Sing _ _ _ _ 16 in in SCONJ IN _ _ _ _ _ 17 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 4 4 NUM CD NumType=Card _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 interact interact NOUN NN Number=Sing _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 up up NOUN NN Number=Sing _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 five five NUM CD NumType=Card _ _ _ _ 28 sequences sequence NOUN NNS Number=Plur _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 termed term VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 P0 P0 NUM CD NumType=Card _ _ _ _ 32 through through ADP IN _ _ _ _ _ 33 P4 P4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 4 4 NUM CD NumType=Card _ _ _ _ 40 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 9956 # text = The molecular mechanisms by which IL-4 induces expression of the IL-4 gene are not known, although the IL-4-activated transcription factor signal transducer and activator of transcription 6 (Stat6) is required for this effect. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 3 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 which which PRON WDT PronType=Rel _ _ _ _ 6 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 4 4 NUM CD NumType=Card _ _ _ _ 9 induces induce NOUN NNS Number=Plur _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 4 4 NUM CD NumType=Card _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 not not PART RB _ _ _ _ _ 19 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 although although SCONJ IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 factor factor NOUN NN Number=Sing _ _ _ _ 30 signal signal NOUN NN Number=Sing _ _ _ _ 31 transducer transducer NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 activator activator NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 transcription transcription NOUN NN Number=Sing _ _ _ _ 36 6 6 NUM CD NumType=Card _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 Stat6 stat6 NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 41 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 42 for for ADP IN _ _ _ _ _ 43 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 44 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 9957 # text = We report here that Stat6 interacts with three binding sites in the human IL-4 promoter by electrophoretic mobility shift assays. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Stat6 Stat6 PROPN NNP Number=Sing _ _ _ _ 6 interacts interact VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 three three NUM CD NumType=Card _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 sites site NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 4 4 NUM CD NumType=Card _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 20 mobility mobility NOUN NN Number=Sing _ _ _ _ 21 shift shift NOUN NN Number=Sing _ _ _ _ 22 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 9958 # text = These sites overlap the P1, P2, and P4 NFAT elements. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 sites site NOUN NNS Number=Plur _ _ _ _ 3 overlap overlap VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 P1 p1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 P2 p2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 P4 P4 NUM CD NumType=Card _ _ _ _ 11 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 12 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 9959 # text = To investigate the role of Stat6 in regulating IL-4 transcription, we used Stat6-deficient Jurkat T cells with different intact IL-4 promoter constructs in cotransfection assays. 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 Stat6 stat6 PROPN NNP Number=Sing _ _ _ _ 7 in in SCONJ IN _ _ _ _ _ 8 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 4 4 NUM CD NumType=Card _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 15 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 Stat6 Stat6 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 deficient deficient NOUN NN Number=Sing _ _ _ _ 19 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 different different ADJ JJ Degree=Pos _ _ _ _ 24 intact intact NOUN NN Number=Sing _ _ _ _ 25 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 4 4 NUM CD NumType=Card _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ _ 29 constructs construct NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 cotransfection cotransfection NOUN NN Number=Sing _ _ _ _ 32 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 9960 # text = We show that, whereas a multimerized response element from the germline IgE promoter was highly induced by IL-4 in Stat6-expressing Jurkat cells, the intact human IL-4 promoter was repressed under similar conditions. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 whereas whereas SCONJ IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 multimerized multimerize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 response response NOUN NN Number=Sing _ _ _ _ 9 element element NOUN NN Number=Sing _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 germline germline NOUN NN Number=Sing _ _ _ _ 13 IgE Ige NOUN NN Number=Sing _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 highly highly ADV RB _ _ _ _ _ 17 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 4 4 NUM CD NumType=Card _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 Stat6 Stat6 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 26 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 intact intact ADJ JJ Degree=Pos _ _ _ _ 31 human human ADJ JJ Degree=Pos _ _ _ _ 32 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 4 4 NUM CD NumType=Card _ _ _ _ 35 promoter promoter NOUN NN Number=Sing _ _ _ _ 36 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 37 repressed repress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 under under ADP IN _ _ _ _ _ 39 similar similar ADJ JJ Degree=Pos _ _ _ _ 40 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 9961 # text = We conclude that the function of Stat6 is highly dependent on promoter context and that this factor promotes IL-4 gene expression in an indirect manner. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 function function NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Stat6 stat6 PROPN NNP Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 highly highly ADV RB _ _ _ _ _ 10 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 context context NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 promotes promote VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 4 4 NUM CD NumType=Card _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 indirect indirect ADJ JJ Degree=Pos _ _ _ _ 27 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9962 # text = Document 0030011993 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030011993 0030011993 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9963 # text = Paradoxical priming effects of IL-10 on cytokine production. 1 Paradoxical Paradoxical ADJ JJ Degree=Pos _ _ _ _ 2 priming priming VERB VBG VerbForm=Ger _ _ _ _ 3 effects effect NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 10 10 NUM CD NumType=Card _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 10 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9964 # text = IL-10 is a well-known immunosuppressive and/or anti-inflammatory cytokine. 1 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 well well ADV RB Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 or or CCONJ CC _ _ _ _ _ 13 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 14 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 9965 # text = However, we report in vitro experimental studies in which IL-10 primed leukocytes and led to an enhanced production of tumor necrosis factor (TNF) upon further stimulation by lipopolysaccharide (LPS). 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 vitro vitro NUM CD NumType=Card _ _ _ _ 7 experimental experimental ADJ JJ Degree=Pos _ _ _ _ 8 studies study NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 which which PRON WDT PronType=Rel _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 10 10 NUM CD NumType=Card _ _ _ _ 14 primed prim ADJ JJ Degree=Pos _ _ _ _ 15 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 production production NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 tumor tumor NOUN NN Number=Sing _ _ _ _ 24 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 upon upon ADP IN _ _ _ _ _ 30 further further ADJ JJ Degree=Pos _ _ _ _ 31 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 9966 # text = Monocytes and peripheral blood mononuclear cells (PBMC) prepared from whole blood maintained for 20 1 Monocytes Monocyte PROPN NNPS Number=Plur _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 4 blood blood NOUN NN Number=Sing _ _ _ _ 5 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 PBMC PBMC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 prepared prepare VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 whole whole ADJ JJ Degree=Pos _ _ _ _ 13 blood blood NOUN NN Number=Sing _ _ _ _ 14 maintained maintain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 20 20 NUM CD NumType=Card _ _ _ _ # sent_id = 9967 # text = h at 37 degrees C in the presence of recombinant human IL-10 had an enhanced capacity to produce TNF in response to LPS. 1 h h INTJ UH _ _ _ _ _ 2 at at ADP IN _ _ _ _ _ 3 37 37 NUM CD NumType=Card _ _ _ _ 4 degrees degree NOUN NNS Number=Plur _ _ _ _ 5 C C PROPN NNP Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 presence presence NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 10 10 NUM CD NumType=Card _ _ _ _ 15 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 capacity capacity NOUN NN Number=Sing _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 produce produce VERB VB VerbForm=Inf _ _ _ _ 21 TNF TNF NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 9968 # text = In addition to TNF, LPS-induced IL-6 and spontaneous IL-1ra production were also enhanced. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - SYM SYM _ _ _ _ SpaceAfter=No 11 6 6 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 spontaneous spontaneous ADJ JJ Degree=Pos _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ra ra NOUN NN Number=Sing _ _ _ _ 17 production production NOUN NN Number=Sing _ _ _ _ 18 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 also also ADV RB _ _ _ _ _ 20 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 9969 # text = When isolated PBMC were first cultured for 20 h in the presence of IL-10 on Teflon to prevent adherence, washed to remove IL-10 and then further cultured in plastic dishes for an additional 20 h in the presence of LPS or IL-1beta, an enhanced release of TNF was observed. 1 When when ADV WRB PronType=Int _ _ _ _ 2 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 PBMC Pbmc NOUN NN Number=Sing _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 first first ADV RB _ _ _ _ _ 6 cultured culture VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 20 20 NUM CD NumType=Card _ _ _ _ 9 h h NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 presence presence NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 10 10 NUM CD NumType=Card _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 Teflon Teflon PROPN NNP Number=Sing _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 prevent prevent VERB VB VerbForm=Inf _ _ _ _ 21 adherence adherence NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 washed wash VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 remove remove VERB VB VerbForm=Inf _ _ _ _ 26 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - SYM SYM _ _ _ _ SpaceAfter=No 28 10 10 NUM CD NumType=Card _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 then then ADV RB PronType=Dem _ _ _ _ 31 further further ADV RB _ _ _ _ _ 32 cultured culture VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 plastic plastic ADJ JJ Degree=Pos _ _ _ _ 35 dishes dish NOUN NNS Number=Plur _ _ _ _ 36 for for ADP IN _ _ _ _ _ 37 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 additional additional ADJ JJ Degree=Pos _ _ _ _ 39 20 20 NUM CD NumType=Card _ _ _ _ 40 h h NOUN NN Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 presence presence NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 LPS LPS PROPN NNP Number=Sing _ _ _ _ 46 or or CCONJ CC _ _ _ _ _ 47 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 49 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 , , PUNCT , _ _ _ _ _ 51 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 52 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 53 release release NOUN NN Number=Sing _ _ _ _ 54 of of ADP IN _ _ _ _ _ 55 TNF TNF PROPN NNP Number=Sing _ _ _ _ 56 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 57 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 9970 # text = This was not the case when PBMC were pre-cultured in plastic multidishes in the presence of IL-10. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 not not PART RB _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 case case NOUN NN Number=Sing _ _ _ _ 6 when when ADV WRB PronType=Int _ _ _ _ 7 PBMC PBMC PROPN NNP Number=Sing _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 pre-cultured pre-culture VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 plastic plastic ADJ JJ Degree=Pos _ _ _ _ 12 multidishes multidish NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 presence presence NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 9971 # text = TNF mRNA expression induced by LPS was decreased when the pre-treatment of PBMC with IL-10 was performed on plastic, whereas this was not the case when cells were pre-cultured with IL-10 on Teflon. 1 TNF TNF PROPN NNP Number=Sing _ _ _ _ 2 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 LPS LPS PROPN NNP Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 when when ADV WRB PronType=Int _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 pre-treatment pre-treatment NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 PBMC PBMC PROPN NNP Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 10 10 NUM CD NumType=Card _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 performed perform VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 on on ADP IN _ _ _ _ _ 21 plastic plastic NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 whereas whereas SCONJ IN _ _ _ _ _ 24 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 25 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 26 not not PART RB _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 case case NOUN NN Number=Sing _ _ _ _ 29 when when ADV WRB PronType=Int _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 pre-cultured pre-culture VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 10 10 NUM CD NumType=Card _ _ _ _ 37 on on ADP IN _ _ _ _ _ 38 Teflon Teflon PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 9972 # text = Furthermore, NFkappaB translocation following LPS activation was higher after IL-10 pre-treatment on Teflon than on plastic. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 4 translocation translocation NOUN NN Number=Sing _ _ _ _ 5 following follow VERB VBG VerbForm=Ger _ _ _ _ 6 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 higher higher ADJ JJR Degree=Cmp _ _ _ _ 10 after after ADP IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 10 10 NUM CD NumType=Card _ _ _ _ 14 pre-treatment pre-treatment NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 Teflon Teflon PROPN NNP Number=Sing _ _ _ _ 17 than than ADP IN _ _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 plastic plastic NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 9973 # text = Interestingly, an enhanced frequency of CD16 and CD68(+) cells among the CD14(+) cells was observed in the presence of IL-10, independently of the pre-culture conditions of the PBMC. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 frequency frequency NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 CD16 CD16 PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 CD68 Cd68 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 +) +) PUNCT -RRB- _ _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 among among ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 CD14 Cd14 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 +) +) PUNCT -RRB- _ _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 presence presence NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 independently independently ADV RB _ _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 pre-culture pre-culture ADJ JJ Degree=Pos _ _ _ _ 33 conditions condition NOUN NNS Number=Plur _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 PBMC Pbmc NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 9974 # text = Altogether, these results indicate that the IL-10-induced up-regulation of cytokine production depends on the prevention of monocyte adherence by red cells in the whole blood assays or by cultures of PBMC on Teflon. 1 Altogether altogether ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 regulation regulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 18 production production NOUN NN Number=Sing _ _ _ _ 19 depends depend VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 on on ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 prevention prevention NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 25 adherence adherence NOUN NN Number=Sing _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 red red ADJ JJ Degree=Pos _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 whole whole ADJ JJ Degree=Pos _ _ _ _ 32 blood blood NOUN NN Number=Sing _ _ _ _ 33 assays assay NOUN NNS Number=Plur _ _ _ _ 34 or or CCONJ CC _ _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 cultures culture NOUN NNS Number=Plur _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 PBMC PBMC PROPN NNP Number=Sing _ _ _ _ 39 on on ADP IN _ _ _ _ _ 40 Teflon Teflon PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 9975 # text = In contrast, the adherence parameter has no effect on the IL-10-induced modulation of some monocyte surface markers. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 adherence adherence NOUN NN Number=Sing _ _ _ _ 6 parameter parameter NOUN NN Number=Sing _ _ _ _ 7 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 no no DET DT _ _ _ _ _ 9 effect effect NOUN NN Number=Sing _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 induced induced VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 modulation modulation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 some some DET DT _ _ _ _ _ 20 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 21 surface surface NOUN NN Number=Sing _ _ _ _ 22 markers marker NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9976 # text = Document 0030012016 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012016 0030012016 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9977 # text = Sequence analysis and expression in cultured lymphocytes of the human FOSB gene (G0S3). 1 Sequence sequence NOUN NN Number=Sing _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 cultured cultured ADJ JJ Degree=Pos _ _ _ _ 7 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 FOSB Fosb NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 G0S3 G0S3 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9978 # text = G0S3 is a member of a set of putative G0/G1 switch regulatory genes (G0S genes) selected by screening cDNA libraries prepared from human blood mononuclear cells cultured for 2 hr with lectin and cycloheximide. 1 G0S3 G0S3 NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 member member NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 set set NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 putative putative ADJ JJ Degree=Pos _ _ _ _ 10 G0/G1 G0/G1 PROPN NNP Number=Sing _ _ _ _ 11 switch switch VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 G0 G0 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 S S NOUN NN Number=Sing _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 selected select VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 by by SCONJ IN _ _ _ _ _ 21 screening scree VERB VBG VerbForm=Ger _ _ _ _ 22 cDNA cDNA PROPN NNP Number=Sing _ _ _ _ 23 libraries library NOUN NNS Number=Plur _ _ _ _ 24 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 from from ADP IN _ _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 blood blood NOUN NN Number=Sing _ _ _ _ 28 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 cultured culture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 2 2 NUM CD NumType=Card _ _ _ _ 33 hr hr NOUN NN Number=Sing _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 lectin lectin NOUN NN Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 9979 # text = The sequence shows high homology with the murine FOSB gene, which encodes a component of the AP1 transcriptional regulator. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 sequence sequence NOUN NN Number=Sing _ _ _ _ 3 shows show VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 high high ADJ JJ Degree=Pos _ _ _ _ 5 homology homology NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 murine murine NOUN NN Number=Sing _ _ _ _ 9 FOSB Fosb NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 component component NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 AP1 AP1 PROPN NNP Number=Sing _ _ _ _ 19 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 20 regulator regulator NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 9980 # text = Comparison of cDNA and genomic sequences reveals a 4-exon structure characteristic of the FOS family of genes. 1 Comparison Comparison NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cDNA cDNA PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 6 sequences sequence NOUN NNS Number=Plur _ _ _ _ 7 reveals reveal NOUN NNS Number=Plur _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 exon exon NOUN NN Number=Sing _ _ _ _ 12 structure structure NOUN NN Number=Sing _ _ _ _ 13 characteristic characteristic NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 FOS FOS ADJ JJ Degree=Pos _ _ _ _ 17 family family NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 9981 # text = Freshly isolated cells show high levels of FOSB/G0S3 and FOS/G0S7 mRNAs, which decline rapidly during incubation in culture medium. 1 Freshly freshly ADV RB _ _ _ _ _ 2 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 high high ADJ JJ Degree=Pos _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 FOSB FOSB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 /G0S3 /G0S3 PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 FOS FOS ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 /G0S7 /G0S7 NOUN NN Number=Sing _ _ _ _ 13 mRNAs mRNAs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 decline decline VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 rapidly rapidly ADV RB _ _ _ _ _ 18 during during ADP IN _ _ _ _ _ 19 incubation incubation NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 culture culture NOUN NN Number=Sing _ _ _ _ 22 medium medium NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 9982 # text = The kinetics of expression suggest that the high initial levels are caused by the isolation procedure, and do not reflect constitutive expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 high high ADJ JJ Degree=Pos _ _ _ _ 9 initial initial ADJ JJ Degree=Pos _ _ _ _ 10 levels level NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 caused cause VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 isolation isolation NOUN NN Number=Sing _ _ _ _ 16 procedure procedure NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 reflect reflect VERB VB VerbForm=Inf _ _ _ _ 22 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 9983 # text = In cells preincubated for a day, levels of FOS mRNA reach a maximum 20 min after the addition of lectin and decline to control levels over the next 3 hr. 1 In in ADP IN _ _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 preincubated preincubate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 day day NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 FOS FOS PROPN NNP Number=Sing _ _ _ _ 11 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 12 reach reach VERB VB VerbForm=Inf _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 maximum maximum ADJ JJ Degree=Pos _ _ _ _ 15 20 20 NUM CD NumType=Card _ _ _ _ 16 min min NOUN NNS Number=Plur _ _ _ _ 17 after after ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 addition addition NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 lectin lectin NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 decline decline NOUN NN Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 control control VERB VB VerbForm=Inf _ _ _ _ 26 levels level NOUN NNS Number=Plur _ _ _ _ 27 over over ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 next next ADJ JJ Degree=Pos _ _ _ _ 30 3 3 NUM CD NumType=Card _ _ _ _ 31 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 9984 # text = Levels of FOSB mRNA reach a maximum 40 min after the addition of lectin and decline to control levels over the next 6 hr. 1 Levels level NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 FOSB FOSB PROPN NNP Number=Sing _ _ _ _ 4 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 5 reach reach VERB VB VerbForm=Inf _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 maximum maximum NOUN NN Number=Sing _ _ _ _ 8 40 40 NUM CD NumType=Card _ _ _ _ 9 min min NOUN NNS Number=Plur _ _ _ _ 10 after after ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 addition addition NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 lectin lectin NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 decline decline NOUN NN Number=Sing _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 control control VERB VB VerbForm=Inf _ _ _ _ 19 levels level NOUN NNS Number=Plur _ _ _ _ 20 over over ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 next next ADJ JJ Degree=Pos _ _ _ _ 23 6 6 NUM CD NumType=Card _ _ _ _ 24 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 9985 # text = In freshly isolated cells, both FOS and FOSB mRNAs increase dramatically in response to the protein synthesis inhibitor cycloheximide. 1 In in ADP IN _ _ _ _ _ 2 freshly freshly ADV RB _ _ _ _ _ 3 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 both both CCONJ CC _ _ _ _ _ 7 FOS FOS PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 FOSB FOSB PROPN NNP Number=Sing _ _ _ _ 10 mRNAs mRNAs PROPN NNP Number=Sing _ _ _ _ 11 increase increase NOUN NN Number=Sing _ _ _ _ 12 dramatically dramatically ADV RB _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 response response NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 19 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 20 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 9986 # text = In preincubated cells, the cycloheximide response is decreased, especially in the case of FOSB. 1 In in ADP IN _ _ _ _ _ 2 preincubated preincubate ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ _ 7 response response NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 especially especially ADV RB _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 case case NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 FOSB FOSB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 9987 # text = These differences in expression of FOS and FOSB suggest different roles and regulation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 differences difference NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 FOS FOS PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 FOSB FOSB PROPN NNP Number=Sing _ _ _ _ 9 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 different different ADJ JJ Degree=Pos _ _ _ _ 11 roles role NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 9988 # text = Regions of low base order-dependent stem-loop potential in the region of the gene are defined. 1 Regions region NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 low low ADJ JJ Degree=Pos _ _ _ _ 4 base base NOUN NN Number=Sing _ _ _ _ 5 order order NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 8 stem stem NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 loop loop NOUN NN Number=Sing _ _ _ _ 11 potential potential NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 region region NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 9989 # text = These indicate where base order has been adapted for purposes other than stem-loop stability (e.g., encoding proteins or gene regulation). 1 These these PRON DT Number=Plur|PronType=Dem _ _ _ _ 2 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 where where ADV WRB PronType=Int _ _ _ _ 4 base base NOUN NN Number=Sing _ _ _ _ 5 order order NOUN NN Number=Sing _ _ _ _ 6 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 adapted adapt VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 purposes purpose NOUN NNS Number=Plur _ _ _ _ 11 other other ADJ JJ Degree=Pos _ _ _ _ 12 than than ADP IN _ _ _ _ _ 13 stem stem NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 loop loop NOUN NN Number=Sing _ _ _ _ 16 stability stability NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 e.g. e.g. X FW _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 21 proteins protein NOUN NNS Number=Plur _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 9990 # text = Regions of low potential in a 68.5-kb genomic segment containing the FOSB gene suggest that the potential may help locate genes in uncharted DNA sequences. 1 Regions region NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 low low ADJ JJ Degree=Pos _ _ _ _ 4 potential potential NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 68.5 68.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kb kb NOUN NN Number=Sing _ _ _ _ 10 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 11 segment segment NOUN NN Number=Sing _ _ _ _ 12 containing contain VERB VBG VerbForm=Ger _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 FOSB FOSB PROPN NNP Number=Sing _ _ _ _ 15 gene gene PROPN NNP Number=Sing _ _ _ _ 16 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 potential potential NOUN NN Number=Sing _ _ _ _ 20 may may AUX MD VerbForm=Fin _ _ _ _ 21 help help VERB VB VerbForm=Inf _ _ _ _ 22 locate locate VERB VB VerbForm=Inf _ _ _ _ 23 genes gene NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 uncharted uncharted ADJ JJ Degree=Pos _ _ _ _ 26 DNA dna NOUN NN Number=Sing _ _ _ _ 27 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 9991 # text = Document 0030012020 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012020 0030012020 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 9992 # text = Transcriptional regulation of the ferritin heavy-chain gene: the activity of the CCAAT binding factor NF-Y is modulated in heme-treated Friend leukemia cells and during monocyte-to-macrophage differentiation. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 ferritin ferritin ADJ JJ Degree=Pos _ _ _ _ 6 heavy heavy ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 chain chain NOUN NN Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 : : PUNCT : _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 CCAAT Ccaat NOUN NN Number=Sing _ _ _ _ 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 Y y PROPN NNP Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 modulated modulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 heme heme NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 Friend friend NOUN NN Number=Sing _ _ _ _ 28 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 during during ADP IN _ _ _ _ _ 32 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 to to ADP IN _ _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 37 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 9993 # text = The ferritin H-chain gene promoter regulation was analyzed in heme-treated Friend leukemia cells (FLCs) and during monocyte-to-macrophage differentiation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ferritin ferritin ADJ JJ Degree=Pos _ _ _ _ 3 H- h- NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 chain chain NOUN NN Number=Sing _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 promoter promoter NOUN NN Number=Sing _ _ _ _ 7 regulation regulation NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 heme heme NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 Friend friend NOUN NN Number=Sing _ _ _ _ 15 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 FLCs FLC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 during during ADP IN _ _ _ _ _ 22 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 to to ADP IN _ _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 27 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 9994 # text = In the majority of cell lines studied, the regulation of ferritin expression was exerted mostly at the translational level. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 majority majority NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 lines line NOUN NNS Number=Plur _ _ _ _ 7 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 regulation regulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 ferritin ferritin ADJ JJ Degree=Pos _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 exerted exert VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 mostly mostly ADV RB _ _ _ _ _ 17 at at ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 translational translational ADJ JJ Degree=Pos _ _ _ _ 20 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 9995 # text = However, in differentiating erythroid cells, which must incorporate high levels of iron to sustain hemoglobin synthesis, and in macrophages, which are involved in iron storage, transcriptional regulation seemed to be a relevant mechanism. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in SCONJ IN _ _ _ _ _ 4 differentiating differentiat VERB VBG VerbForm=Ger _ _ _ _ 5 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 must must AUX MD VerbForm=Fin _ _ _ _ 10 incorporate incorporate VERB VB VerbForm=Inf _ _ _ _ 11 high high ADJ JJ Degree=Pos _ _ _ _ 12 levels level NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 iron iron ADJ JJ Degree=Pos _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 sustain sustain VERB VB VerbForm=Inf _ _ _ _ 17 hemoglobin hemoglobin ADP IN _ _ _ _ _ 18 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 involved involved ADJ JJ Degree=Pos _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 iron iron ADJ JJ Degree=Pos _ _ _ _ 29 storage storage NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 32 regulation regulation NOUN NN Number=Sing _ _ _ _ 33 seemed seem VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 to to PART TO _ _ _ _ _ 35 be be AUX VB VerbForm=Inf _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 38 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 9996 # text = We show here that the minimum region of the ferritin H-gene promoter that is able to confer transcriptional regulation by heme in FLCs to a reporter gene is 77 nucleotides upstream of the TATA box. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 minimum minimum NOUN NN Number=Sing _ _ _ _ 7 region region NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 ferritin ferritin ADJ JJ Degree=Pos _ _ _ _ 11 H- H- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 able able ADJ JJ Degree=Pos _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 confer confer VERB VB VerbForm=Inf _ _ _ _ 19 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 20 regulation regulation NOUN NN Number=Sing _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 heme heme NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 FLCs FLC NOUN NNS Number=Plur _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 reporter reporter NOUN NN Number=Sing _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 77 77 NUM CD NumType=Card _ _ _ _ 31 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 32 upstream upstream NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 TATA TATa NOUN NN Number=Sing _ _ _ _ 36 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 9997 # text = This cis element binds a protein complex referred to as HRF 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 cis cis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 element element NOUN NN Number=Sing _ _ _ _ 4 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 complex complex NOUN NN Number=Sing _ _ _ _ 8 referred refer VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 HRF HRF PROPN NNP Number=Sing _ _ _ _ # sent_id = 9998 # text = (heme-responsive factor), which is greatly enhanced both in heme-treated FLCs and during monocyte-to-macrophage differentiation. 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 heme heme NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 greatly greatly ADV RB _ _ _ _ _ 11 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 both both CCONJ CC _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 heme heme NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 FLCs Flcs NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 during during ADP IN _ _ _ _ _ 20 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 to to ADP IN _ _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 25 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 9999 # text = The CCAAT element present in reverse orientation in this promoter region of the ferritin H-chain gene is necessary for binding and for gene activity, since a single point mutation is able to abolish the binding of HRF and the transcriptional activity in transfected cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 CCAAT CCAAT NOUN NN Number=Sing _ _ _ _ 3 element element NOUN NN Number=Sing _ _ _ _ 4 present present VERB VB VerbForm=Inf _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 reverse reverse NOUN NN Number=Sing _ _ _ _ 7 orientation orientation NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 region region NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 ferritin ferritin ADJ JJ Degree=Pos _ _ _ _ 15 H- H- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 chain chain NOUN NN Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 20 for for SCONJ IN _ _ _ _ _ 21 binding bind VERB VBG VerbForm=Ger _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 gene gene ADJ JJ Degree=Pos _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 since since ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 single single ADJ JJ Degree=Pos _ _ _ _ 30 point point NOUN NN Number=Sing _ _ _ _ 31 mutation mutation NOUN NN Number=Sing _ _ _ _ 32 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 able able ADJ JJ Degree=Pos _ _ _ _ 34 to to PART TO _ _ _ _ _ 35 abolish abolish VERB VB VerbForm=Inf _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 binding binding NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 HRF HRF PROPN NNP Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 43 activity activity NOUN NN Number=Sing _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 10000 # text = By competition experiments and supershift assays, we identified the induced HRF as containing at least the ubiquitous transcription factor NF-Y. 1 By by ADP IN _ _ _ _ _ 2 competition competition NOUN NN Number=Sing _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 supershift supershift ADJ JJ Degree=Pos _ _ _ _ 6 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 9 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 HRF Hrf NOUN NN Number=Sing _ _ _ _ 13 as as SCONJ IN _ _ _ _ _ 14 containing contain VERB VBG VerbForm=Ger _ _ _ _ 15 at at ADV RB _ _ _ _ _ 16 least least ADV RBS Degree=Sup _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 Y. Y. PROPN NNP Number=Sing _ _ _ _ # sent_id = 10001 # text = NF-Y is formed by three subunits, A, B, and C, all of which are necessary for DNA binding. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 Y y PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 formed form VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 three three NUM CD NumType=Card _ _ _ _ 8 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 C c PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 all all DET DT _ _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 22 for for SCONJ IN _ _ _ _ _ 23 DNA dna NOUN NN Number=Sing _ _ _ _ 24 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 10002 # text = Cotransfection with a transdominant negative mutant of the NF-YA subunit abolishes the transcriptional activation by heme, indicating that NF-Y plays an essential role in this activation. 1 Cotransfection Cotransfection NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 transdominant transdominant ADJ JJ Degree=Pos _ _ _ _ 5 negative negative ADJ JJ Degree=Pos _ _ _ _ 6 mutant mutant NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 YA ya PROPN NNP Number=Sing _ _ _ _ 12 subunit subunit NOUN NN Number=Sing _ _ _ _ 13 abolishes abolish VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 heme heme NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 Y y PROPN NNP Number=Sing _ _ _ _ 25 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 essential essential ADJ JJ Degree=Pos _ _ _ _ 28 role role NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 31 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 10003 # text = We have also observed a differential expression of the NF-YA subunit in heme-treated and control FLCs and during monocyte-to-macrophage differentiation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 differential differential ADJ JJ Degree=Pos _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 YA ya PROPN NNP Number=Sing _ _ _ _ 13 subunit subunit NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 heme heme ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 treated treat VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 control control VERB VB VerbForm=Inf _ _ _ _ 20 FLCs FLC PROPN NNP Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 during during ADP IN _ _ _ _ _ 23 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 to to ADP IN _ _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 28 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10004 # text = Document 0030012022 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012022 0030012022 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10005 # text = Biphasic control of NF-kappa B activation induced by the triggering of HLA-DR antigens expressed on B cells. 1 Biphasic Biphasic ADJ JJ Degree=Pos _ _ _ _ 2 control control NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B b PROPN NNP Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 triggering triggering NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 DR dr PROPN NNP Number=Sing _ _ _ _ 17 antigens antigen NOUN NNS Number=Plur _ _ _ _ 18 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 B b ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10006 # text = The regulation of NF-kappa B activation following the triggering of HLA-DR antigens by mAb L243 has been studied at various times in Raji cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 following follow VERB VBG VerbForm=Ger _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 triggering triggering NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 DR dr PROPN NNP Number=Sing _ _ _ _ 16 antigens antigen NOUN NNS Number=Plur _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 mAb mAb PROPN NNP Number=Sing _ _ _ _ 19 L243 L243 NOUN NN Number=Sing _ _ _ _ 20 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 22 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 at at ADP IN _ _ _ _ _ 24 various various ADJ JJ Degree=Pos _ _ _ _ 25 times time NOUN NNS Number=Plur _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 Raji Raji PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 10007 # text = Electrophoretic mobility shift assays demonstrated a strong increase of NF-kappa B DNA binding after triggering of HLA-DR antigens. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assays assays ADV RB _ _ _ _ _ 5 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 strong strong ADJ JJ Degree=Pos _ _ _ _ 8 increase increase NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 DNA dna NOUN NN Number=Sing _ _ _ _ 15 binding bind VERB VBG VerbForm=Ger _ _ _ _ 16 after after SCONJ IN _ _ _ _ _ 17 triggering trigger VERB VBG VerbForm=Ger _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 DR dr PROPN NNP Number=Sing _ _ _ _ 22 antigens antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 10008 # text = Using TNF-alpha-activity neutralizing antibodies, the authors demonstrated that the upregulation of NF-kappa B was found to depend, at later time point, on an autocrine effect of TNF-alpha secreted following triggering of HLA-DR antigens. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 alpha-activity alpha-activity NOUN NN Number=Sing _ _ _ _ 5 neutralizing neutralizing VERB VBG VerbForm=Ger _ _ _ _ 6 antibodies antibody NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 authors author NOUN NNS Number=Plur _ _ _ _ 10 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B b PROPN NNP Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 depend depend VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 at at ADP IN _ _ _ _ _ 25 later later ADV RB _ _ _ _ _ 26 time time NOUN NN Number=Sing _ _ _ _ 27 point point NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 on on ADP IN _ _ _ _ _ 30 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 autocrine autocrine ADJ JJ Degree=Pos _ _ _ _ 32 effect effect NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 alpha alpha ADV RB _ _ _ _ _ 37 secreted secret VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 following follow VERB VBG VerbForm=Ger _ _ _ _ 39 triggering triggering NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 DR dr PROPN NNP Number=Sing _ _ _ _ 44 antigens antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 10009 # text = In contrast, it was found to be TNF-alpha independent in the early time point. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 alpha alpha ADV RB _ _ _ _ _ 12 independent independent ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 early early ADJ JJ Degree=Pos _ _ _ _ 16 time time NOUN NN Number=Sing _ _ _ _ 17 point point NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 10010 # text = Moreover, the upregulation of NF-kappa B binding activity is regulated by the triggering of selected epitopes of HLA-DR antigens. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 binding binding VERB VBG VerbForm=Ger _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 triggering triggering NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 selected select VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 epitopes epitope NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 DR dr PROPN NNP Number=Sing _ _ _ _ 24 antigens antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 10011 # text = In fact, mAb L243 but not the staphylococcal superantigens, staphylococcal exotoxin toxic shock syndrome toxin-I or staphylococcal enterotoxin B, regulate the NF-kappa B binding activity. 1 In in ADP IN _ _ _ _ _ 2 fact fact NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 mAb mAb PROPN NNP Number=Sing _ _ _ _ 5 L243 L243 NUM CD NumType=Card _ _ _ _ 6 but but CCONJ CC _ _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 staphylococcal staphylococcal ADJ JJ Degree=Pos _ _ _ _ 10 superantigens superantigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 staphylococcal staphylococcal ADJ JJ Degree=Pos _ _ _ _ 13 exotoxin exotoxin ADP IN _ _ _ _ _ 14 toxic toxic ADJ JJ Degree=Pos _ _ _ _ 15 shock shock NOUN NN Number=Sing _ _ _ _ 16 syndrome syndrome NOUN NN Number=Sing _ _ _ _ 17 toxin toxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 staphylococcal staphylococcal ADJ JJ Degree=Pos _ _ _ _ 22 enterotoxin enterotoxin NOUN NN Number=Sing _ _ _ _ 23 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ _ 31 binding bind VERB VBG VerbForm=Ger _ _ _ _ 32 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10012 # text = Document 0030012023 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012023 0030012023 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10013 # text = Tissue-specific regulation of the ecto-5'-nucleotidase promoter. 1 Tissue- Tissue- SYM NFP _ _ _ _ SpaceAfter=No 2 specific specific ADJ JJ Degree=Pos _ _ _ _ 3 regulation regulation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 ecto ecto NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 '- '- PUNCT . _ _ _ _ SpaceAfter=No 10 nucleotidase nucleotidase NOUN NN Number=Sing _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 10014 # text = Role of the camp response element site in mediating repression by the upstream regulatory region. 1 Role role NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 camp camp NOUN NN Number=Sing _ _ _ _ 5 response response NOUN NN Number=Sing _ _ _ _ 6 element element NOUN NN Number=Sing _ _ _ _ 7 site site NOUN NN Number=Sing _ _ _ _ 8 in in SCONJ IN _ _ _ _ _ 9 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 10 repression repression NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 14 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 15 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10015 # text = We have isolated the 5' region of the ecto-5'-nucleotidase (low K(m) 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 ' ' PUNCT `` _ _ _ _ _ 7 region region NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 ecto ecto NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 '- '- PUNCT . _ _ _ _ SpaceAfter=No 14 nucleotidase nucleotidase NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 low low ADJ JJ Degree=Pos _ _ _ _ 17 K K NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 m m NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ # sent_id = 10016 # text = 5'-NT) gene and established that a 969-base pair (bp) fragment confers cell-specific expression of a CAT reporter gene that correlates with the expression of endogenous ecto-5'-NT mRNA and enzymatic activity. 1 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 ' ' NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 - - SYM SYM _ _ _ _ SpaceAfter=No 4 NT not PART RB _ _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 gene gene VERB VB VerbForm=Inf _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 established establish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 969 969 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 base base NOUN NN Number=Sing _ _ _ _ 14 pair pair NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 bp bp NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 fragment fragment NOUN NN Number=Sing _ _ _ _ 19 confers confer NOUN NNS Number=Plur _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 specific specific ADJ JJ Degree=Pos _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 CAT cat ADJ JJ Degree=Pos _ _ _ _ 27 reporter reporter NOUN NN Number=Sing _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 that that PRON WDT PronType=Rel _ _ _ _ 30 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 expression expression NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 36 ecto ecto NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 -5 -5 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 NT not PROPN NNP Number=Sing _ _ _ _ 41 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 enzymatic enzymatic ADJ JJ Degree=Pos _ _ _ _ 44 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 10017 # text = A 768-bp upstream negative regulatory region has been identified that conferred lymphocyte-specific negative regulation in a heterologous system with a 244-bp deoxycytidine kinase core promoter. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 768 768 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 bp bp NOUN NN Number=Sing _ _ _ _ 5 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 6 negative negative ADJ JJ Degree=Pos _ _ _ _ 7 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 8 region region NOUN NN Number=Sing _ _ _ _ 9 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 11 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 conferred confer VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 negative negative ADJ JJ Degree=Pos _ _ _ _ 18 regulation regulation NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 22 system system NOUN NN Number=Sing _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 244 244 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 bp bp NOUN NN Number=Sing _ _ _ _ 28 deoxycytidine deoxycytidine NOUN NN Number=Sing _ _ _ _ 29 kinase kinase NOUN NN Number=Sing _ _ _ _ 30 core core NOUN NN Number=Sing _ _ _ _ 31 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 10018 # text = DNase I footprinting identified several protected areas including Sp1, Sp1/AP-2, and cAMP response element (CRE) binding sites within the 201-bp core promoter region and Sp1, NRE-2a, TCF-1/LEF-1, and Sp1/NF-AT binding sites in the upstream regulatory region. 1 DNase DNase INTJ UH _ _ _ _ _ 2 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 3 footprinting footprint AUX VBG VerbForm=Ger _ _ _ _ 4 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 several several ADJ JJ Degree=Pos _ _ _ _ 6 protected protect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 areas area NOUN NNS Number=Plur _ _ _ _ 8 including include VERB VBG VerbForm=Ger _ _ _ _ 9 Sp1 sp1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 Sp1/AP sp1/Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 cAMP camp NOUN NN Number=Sing _ _ _ _ 17 response response NOUN NN Number=Sing _ _ _ _ 18 element element NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 CRE Cre NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 sites site NOUN NNS Number=Plur _ _ _ _ 24 within within ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 201 201 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 bp bp NOUN NN Number=Sing _ _ _ _ 29 core core NOUN NN Number=Sing _ _ _ _ 30 promoter promoter NOUN NN Number=Sing _ _ _ _ 31 region region NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 Sp1 sp1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 NRE NRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 -2a -2a NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 TCF TCF NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 1/LEF 1/LEF NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 Sp1/NF Sp1/NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT , _ _ _ _ SpaceAfter=No 47 AT at SCONJ IN _ _ _ _ _ 48 binding bind VERB VBG VerbForm=Ger _ _ _ _ 49 sites site NOUN NNS Number=Plur _ _ _ _ 50 in in ADP IN _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 53 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 54 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 10019 # text = Whereas the CRE site was essential in mediating the negative activity of the upstream regulatory region in Jurkat but not in HeLa cells, mutation of the Sp1/AP-2 site decreased promoter activity in both cell lines. 1 Whereas whereas SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 CRE CRE PROPN NNP Number=Sing _ _ _ _ 4 site site NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 essential essential ADJ JJ Degree=Pos _ _ _ _ 7 in in SCONJ IN _ _ _ _ _ 8 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 negative negative ADJ JJ Degree=Pos _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 15 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 16 region region NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 mutation mutation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 Sp1/AP sp1/Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 2 2 NUM CD NumType=Card _ _ _ _ 31 site site NOUN NN Number=Sing _ _ _ _ 32 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 promoter promoter NOUN NN Number=Sing _ _ _ _ 34 activity activity NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 both both DET DT _ _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 10020 # text = Electrophoretic mobility shift assay analysis of proteins binding to the CRE site identified both ATF-1 and ATF-2 in Jurkat cells. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assay assay NOUN NN Number=Sing _ _ _ _ 5 analysis analysis NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 proteins protein NOUN NNS Number=Plur _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 CRE CRE PROPN NNP Number=Sing _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ _ 13 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 both both CCONJ CC _ _ _ _ _ 15 ATF ATF NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 ATF ATF NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 10021 # text = Finally, phorbol 12-myristate 13-acetate increased the activity of both the core and the 969-bp promoter fragments, and this increase was abrogated by mutations at the CRE site. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 4 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT : _ _ _ _ SpaceAfter=No 6 myristate myristate NOUN NN Number=Sing _ _ _ _ 7 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT : _ _ _ _ SpaceAfter=No 9 acetate acetate NOUN NN Number=Sing _ _ _ _ 10 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 both both CCONJ CC _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 core core NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 969 969 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 bp bp NOUN NN Number=Sing _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ _ 23 fragments fragment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 27 increase increase NOUN NN Number=Sing _ _ _ _ 28 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 29 abrogated abrogate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 mutations mutation NOUN NNS Number=Plur _ _ _ _ 32 at at ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 CRE CRE PROPN NNP Number=Sing _ _ _ _ 35 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 10022 # text = In summary, we have identified a tissue-specific regulatory region 5' of the ecto-5'-NT core promoter that requires the presence of a functional CRE site within the basal promoter for its suppressive activity. 1 In in ADP IN _ _ _ _ _ 2 summary summary NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 specific specific ADJ JJ Degree=Pos _ _ _ _ 11 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 12 region region NOUN NN Number=Sing _ _ _ _ 13 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ' ' NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 ecto ecto NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ' ' NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 - - SYM SYM _ _ _ _ SpaceAfter=No 22 NT not ADJ JJ Degree=Pos _ _ _ _ 23 core core NOUN NN Number=Sing _ _ _ _ 24 promoter promoter NOUN NN Number=Sing _ _ _ _ 25 that that PRON WDT PronType=Rel _ _ _ _ 26 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 presence presence NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 functional functional ADJ JJ Degree=Pos _ _ _ _ 32 CRE Cre NOUN NN Number=Sing _ _ _ _ 33 site site NOUN NN Number=Sing _ _ _ _ 34 within within ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 basal basal ADJ JJ Degree=Pos _ _ _ _ 37 promoter promoter NOUN NN Number=Sing _ _ _ _ 38 for for ADP IN _ _ _ _ _ 39 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 40 suppressive suppressive ADJ JJ Degree=Pos _ _ _ _ 41 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10023 # text = Document 0030012031 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012031 0030012031 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10024 # text = Characterization of a new isoform of the NFAT (nuclear factor of activated T cells) gene family member NFATc [published erratum appears in J Biol Chem 1996 Dec 27;271(52):33705] 1 Characterization Characterization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 new new ADJ JJ Degree=Pos _ _ _ _ 5 isoform isoform NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 NFAT Nfat PROPN NNP Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 gene gene ADJ JJ Degree=Pos _ _ _ _ 18 family family NOUN NN Number=Sing _ _ _ _ 19 member member NOUN NN Number=Sing _ _ _ _ 20 NFATc NFATc PROPN NNP Number=Sing _ _ _ _ 21 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 published publish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 erratum erratum NOUN NN Number=Sing _ _ _ _ 24 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 J j PROPN NNP Number=Sing _ _ _ _ 27 Biol Biol PROPN NNP Number=Sing _ _ _ _ 28 Chem Chem PROPN NNP Number=Sing _ _ _ _ 29 1996 1996 NUM CD NumType=Card _ _ _ _ 30 Dec Dec PROPN NNP Number=Sing _ _ _ _ 31 27;271 27;271 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 52) 52) SYM NFP _ _ _ _ SpaceAfter=No 34 :33705 :33705 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 10025 # text = The cyclosporin A (CsA)/FK506-sensitive nuclear factor of activated T cells (NFAT) plays a key role in the inducible expression of cytokine genes in T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 3 A a NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 CsA csa NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 7 /FK506 /FK506 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 -sensitive -sensitive ADJ JJ Degree=Pos _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 T T PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 key key ADJ JJ Degree=Pos _ _ _ _ 21 role role NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 28 genes gene NOUN NNS Number=Plur _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 T t PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 10026 # text = Although NFAT has been recently shown to be inducible in several non-T immune cells, the NFAT gene family members characterized to date have been isolated only from T cells. 1 Although although SCONJ IN _ _ _ _ _ 2 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 3 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 recently recently ADV RB _ _ _ _ _ 6 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 several several ADJ JJ Degree=Pos _ _ _ _ 12 non-T non-t ADJ JJ Degree=Pos _ _ _ _ 13 immune immune ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 family family NOUN NN Number=Sing _ _ _ _ 20 members member NOUN NNS Number=Plur _ _ _ _ 21 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 date date NOUN NN Number=Sing _ _ _ _ 24 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 26 isolated isolate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 only only ADV RB _ _ _ _ _ 28 from from ADP IN _ _ _ _ _ 29 T T PROPN NNP Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 10027 # text = To further characterize NFAT function in human B cells and to demonstrate cytokine gene specificity of NFAT proteins, we report here the isolation and characterization of a cDNA clone from the Raji B cell line. 1 To to ADP IN _ _ _ _ _ 2 further further ADJ JJ Degree=Pos _ _ _ _ 3 characterize characterize NOUN NN Number=Sing _ _ _ _ 4 NFAT Nfat NOUN NN Number=Sing _ _ _ _ 5 function function NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 B b ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 demonstrate demonstrate VERB VB VerbForm=Inf _ _ _ _ 13 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 specificity specificity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 18 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 21 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 here here ADV RB PronType=Dem _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 isolation isolation NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 characterization characterization NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 30 clone clone NOUN NN Number=Sing _ _ _ _ 31 from from ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 Raji Raji PROPN NNP Number=Sing _ _ _ _ 34 B b PROPN NNP Number=Sing _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ _ 36 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 10028 # text = The cDNA clone encodes a new isoform, NFATc.beta, of the NFAT gene family member NFATc (designated here NFATc.alpha). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 3 clone clone NOUN NN Number=Sing _ _ _ _ 4 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 new new ADJ JJ Degree=Pos _ _ _ _ 7 isoform isoform NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 NFATc.beta NFATc.beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 family family NOUN NN Number=Sing _ _ _ _ 16 member member NOUN NN Number=Sing _ _ _ _ 17 NFATc NFATc PROPN NNP Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 here here ADV RB PronType=Dem _ _ _ _ 21 NFATc.alpha NFATc.alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 10029 # text = The amino acid sequence of NFATc.beta differs from that of NFATc.alpha in the first NH2-terminal 29 residues and contains an additional region of 142 residues at the COOH terminus. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 amino amino DET DT _ _ _ _ _ 3 acid acid ADJ JJ Degree=Pos _ _ _ _ 4 sequence sequence NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NFATc.beta NFATc.beta PROPN NNP Number=Sing _ _ _ _ 7 differs differ NOUN NNS Number=Plur _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NFATc.alpha NFATc.alpha PROPN NNP Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 15 NH2 Nh2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 18 29 29 NUM CD NumType=Card _ _ _ _ 19 residues residue NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 additional additional ADJ JJ Degree=Pos _ _ _ _ 24 region region NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 142 142 NUM CD NumType=Card _ _ _ _ 27 residues residue NOUN NNS Number=Plur _ _ _ _ 28 at at ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 COOH COOH ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 31 terminus terminus NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 10030 # text = Northern analysis using a probe encompassing a common region of both isoforms showed two mRNA species of 2.7 and 4.5 kilobase pairs, while an NFATc.beta-specific probe detected only the 4.5-kilobase pair mRNA which was preferentially expressed in the spleen. 1 Northern northern ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 using use VERB VBG VerbForm=Ger _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 probe probe NOUN NN Number=Sing _ _ _ _ 6 encompassing encompasse VERB VBG VerbForm=Ger _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 common common ADJ JJ Degree=Pos _ _ _ _ 9 region region NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 both both DET DT _ _ _ _ _ 12 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 13 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 two two NUM CD NumType=Card _ _ _ _ 15 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 16 species species NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 2.7 2.7 NUM CD NumType=Card _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 4.5 4.5 NUM CD NumType=Card _ _ _ _ 21 kilobase kilobase NOUN NN Number=Sing _ _ _ _ 22 pairs pair NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 while while SCONJ IN _ _ _ _ _ 25 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 NFATc.beta NFATc.beta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 specific specific ADJ JJ Degree=Pos _ _ _ _ 29 probe probe NOUN NN Number=Sing _ _ _ _ 30 detected detect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 only only ADV RB _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 4.5 4.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 kilobase kilobase NOUN NN Number=Sing _ _ _ _ 36 pair pair NOUN NN Number=Sing _ _ _ _ 37 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 38 which which PRON WDT PronType=Rel _ _ _ _ 39 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 40 preferentially preferentially ADV RB _ _ _ _ _ 41 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 spleen spleen NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 10031 # text = Transient expression of NFATc.beta was capable of activating an interleukin-2 NFAT-driven reporter gene in stimulated Jurkat cells in a CsA-sensitive manner. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NFATc.beta NFATc.beta PROPN NNP Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 capable capable ADJ JJ Degree=Pos _ _ _ _ 7 of of SCONJ IN _ _ _ _ _ 8 activating activate VERB VBG VerbForm=Ger _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 reporter reporter NOUN NN Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 stimulated stimulated ADJ JJ Degree=Pos _ _ _ _ 20 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 27 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 10032 # text = However, NFATc.beta neither bound to the kappa3 element ( an NFAT-binding site ) in the tumor necrosis factor-alpha promoter nor activated the tumor necrosis factor-alpha promoter in cotransfection assays. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 NFATc.beta NFATc.beta PROPN NNP Number=Sing _ _ _ _ 4 neither neither DET DT _ _ _ _ _ 5 bound bound ADJ JJ Degree=Pos _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 kappa3 kappa3 NOUN NN Number=Sing _ _ _ _ 9 element element NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 binding binding VERB VBG VerbForm=Ger _ _ _ _ 15 site site NOUN NN Number=Sing _ _ _ _ 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 tumor tumor NOUN NN Number=Sing _ _ _ _ 20 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 promoter promoter NOUN NN Number=Sing _ _ _ _ 25 nor nor CCONJ CC _ _ _ _ _ 26 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 tumor tumor NOUN NN Number=Sing _ _ _ _ 29 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 alpha alpha NOUN NN Number=Sing _ _ _ _ 33 promoter promoter NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 cotransfection cotransfection NOUN NN Number=Sing _ _ _ _ 36 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 10033 # text = These data suggest that different members or isoforms of NFAT gene family may regulate inducible expression of different cytokine genes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 different different ADJ JJ Degree=Pos _ _ _ _ 6 members member NOUN NNS Number=Plur _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 family family NOUN NN Number=Sing _ _ _ _ 13 may may AUX MD VerbForm=Fin _ _ _ _ 14 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 15 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 different different ADJ JJ Degree=Pos _ _ _ _ 19 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10034 # text = Document 0030012032 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012032 0030012032 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10035 # text = Bacterial lipopolysaccharide activates nuclear factor-kappaB through interleukin-1 signaling mediators in cultured human dermal endothelial cells and mononuclear phagocytes. 1 Bacterial Bacterial ADJ JJ Degree=Pos _ _ _ _ 2 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 3 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factor-kappaB factor-kappab NOUN NN Number=Sing _ _ _ _ 6 through through ADP IN _ _ _ _ _ 7 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 signaling signaling NOUN NN Number=Sing _ _ _ _ 11 mediators mediator NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 cultured culture ADJ JJ Degree=Pos _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 dermal dermal ADJ JJ Degree=Pos _ _ _ _ 16 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 20 phagocytes phagocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10036 # text = Bacterial lipopolysaccharide (LPS)-mediated immune responses, including activation of monocytes, macrophages, and endothelial cells, play an important role in the pathogenesis of Gram-negative bacteria-induced sepsis syndrome. 1 Bacterial Bacterial ADJ JJ Degree=Pos _ _ _ _ 2 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 6 - - PUNCT : _ _ _ _ SpaceAfter=No 7 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 immune immune ADJ JJ Degree=Pos _ _ _ _ 9 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 including include VERB VBG VerbForm=Ger _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 play play VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 23 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 important important ADJ JJ Degree=Pos _ _ _ _ 25 role role NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 Gram- Gram- SYM NFP _ _ _ _ SpaceAfter=No 31 negative negative ADJ JJ Degree=Pos _ _ _ _ 32 bacteria bacteria NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 sepsis sepsis DET DT Number=Sing|PronType=Dem _ _ _ _ 36 syndrome syndrome NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 10037 # text = Activation of NF-kappaB is thought to be required for cytokine release from LPS-responsive cells, a critical step for endotoxic effects. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 13 release release NOUN NN Number=Sing _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 critical critical ADJ JJ Degree=Pos _ _ _ _ 22 step step NOUN NN Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 endotoxic endotoxic ADJ JJ Degree=Pos _ _ _ _ 25 effects effect NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 10038 # text = Here we investigated the role and involvement of interleukin-1 (IL-1) and tumor necrosis factor (TNF-alpha) signal transducer molecules in LPS signaling in human dermal microvessel endothelial cells (HDMEC) and THP-1 monocytic cells. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 involvement involvement NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 tumor tumor NOUN NN Number=Sing _ _ _ _ 19 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 signal signal NOUN NN Number=Sing _ _ _ _ 27 transducer transducer NOUN NN Number=Sing _ _ _ _ 28 molecules molecule NOUN NNS Number=Plur _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 LPS Lp PROPN NNP Number=Sing _ _ _ _ 31 signaling signale VERB VBG VerbForm=Ger _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 human human ADJ JJ Degree=Pos _ _ _ _ 34 dermal dermal ADJ JJ Degree=Pos _ _ _ _ 35 microvessel microvessel NOUN NN Number=Sing _ _ _ _ 36 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 HDMEC HDMEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 1 1 NUM CD NumType=Card _ _ _ _ 45 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 46 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 10039 # text = LPS stimulation of HDMEC and THP-1 cells initiated an IL-1 receptor-like NF-kappaB signaling cascade. 1 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 2 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 HDMEC Hdmec NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 initiated initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - SYM SYM _ _ _ _ SpaceAfter=No 17 like like ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 signaling signaling VERB VBG VerbForm=Ger _ _ _ _ 22 cascade cascade NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 10040 # text = In transient cotransfection experiments, dominant negative mutants of the IL-1 signaling pathway, including MyD88, IRAK, IRAK2, and TRAF6 inhibited both IL-1- and LPS-induced NF-kappaB-luciferase activity. 1 In in ADP IN _ _ _ _ _ 2 transient transient ADJ JJ Degree=Pos _ _ _ _ 3 cotransfection cotransfection NOUN NN Number=Sing _ _ _ _ 4 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 7 negative negative ADJ JJ Degree=Pos _ _ _ _ 8 mutants mutant NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 signaling signaling NOUN NN Number=Sing _ _ _ _ 15 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 including include VERB VBG VerbForm=Ger _ _ _ _ 18 MyD88 MyD88 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 IRAK IRAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 IRAK2 Irak2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 TRAF6 TRAF6 PROPN NNP Number=Sing _ _ _ _ 26 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 both both CCONJ CC _ _ _ _ _ 28 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 LPS Lps NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 41 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 10041 # text = LPS-induced NF-kappaB activation was not inhibited by a dominant negative mutant of TRAF2 that is involved in TNF signaling. 1 LPS Lps INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 14 negative negative ADJ JJ Degree=Pos _ _ _ _ 15 mutant mutant NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 TRAF2 TRAF2 NUM CD NumType=Card _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 involved involved ADJ JJ Degree=Pos _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 TNF Tnf ADJ JJ Degree=Pos _ _ _ _ 23 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 10042 # text = LPS-induced activation of NF-kappaB-responsive reporter gene was not inhibited by IL-1 receptor antagonist. 1 LPS Lps INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 11 reporter reporter NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ _ 21 antagonist antagonist NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10043 # text = TLR2 and TLR4 were expressed on the cell surface of HDMEC and THP-1 cells. 1 TLR2 TLR2 NUM CD NumType=Card _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 TLR4 TLR4 NUM CD NumType=Card _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 surface surface NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 HDMEC Hdmec NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 10044 # text = These findings suggest that a signal transduction molecule in the LPS receptor complex may belong to the IL-1 receptor/toll-like receptor (TLR) super family, and the LPS signaling cascade uses an analogous molecular framework for signaling as IL-1 in mononuclear phagocytes and endothelial cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 signal signal NOUN NN Number=Sing _ _ _ _ 7 transduction transduction NOUN NN Number=Sing _ _ _ _ 8 molecule molecule NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 LPS LPS NOUN NN Number=Sing _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 complex complex NOUN NN Number=Sing _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 belong belong VERB VB VerbForm=Inf _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 / / PUNCT , _ _ _ _ SpaceAfter=No 23 toll toll NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 like like ADJ JJ Degree=Pos _ _ _ _ 26 receptor receptor NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 TLR Tlr NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 super super ADV RB _ _ _ _ _ 31 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 36 signaling signaling NOUN NN Number=Sing _ _ _ _ 37 cascade cascade NOUN NN Number=Sing _ _ _ _ 38 uses use VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 analogous analogous ADJ JJ Degree=Pos _ _ _ _ 41 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 42 framework framework NOUN NN Number=Sing _ _ _ _ 43 for for SCONJ IN _ _ _ _ _ 44 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 45 as as ADP IN _ _ _ _ _ 46 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 1 1 NUM CD NumType=Card _ _ _ _ 49 in in ADP IN _ _ _ _ _ 50 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 51 phagocytes phagocyte NOUN NNS Number=Plur _ _ _ _ 52 and and CCONJ CC _ _ _ _ _ 53 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 54 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10045 # text = Document 0030012035 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012035 0030012035 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10046 # text = The human toll signaling pathway: divergence of nuclear factor kappaB and JNK/SAPK activation upstream of tumor necrosis factor receptor-associated factor 6 (TRAF6). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 toll toll NOUN NN Number=Sing _ _ _ _ 4 signaling signaling NOUN NN Number=Sing _ _ _ _ 5 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 : : PUNCT : _ _ _ _ _ 7 divergence divergence NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 JNK JNK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 SAPK SAPK PROPN NNP Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 upstream upstream NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 tumor tumor NOUN NN Number=Sing _ _ _ _ 20 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 6 6 NUM CD NumType=Card _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 TRAF6 TRAF6 NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10047 # text = The human homologue of Drosophila Toll (hToll) is a recently cloned receptor of the interleukin 1 receptor (IL-1R) superfamily, and has been implicated in the activation of adaptive immunity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 homologue homologue NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Drosophila Drosophila PROPN NNP Number=Sing _ _ _ _ 6 Toll toll PROPN NNP Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 hToll hToll PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 recently recently ADV RB _ _ _ _ _ 13 cloned cloned ADJ JJ Degree=Pos _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 interleukin interleukin ADJ JJ Degree=Pos _ _ _ _ 18 1 1 NUM CD NumType=Card _ _ _ _ 19 receptor receptor NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1R 1R PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 superfamily superfamily NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 30 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 activation activation NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 adaptive adaptive ADJ JJ Degree=Pos _ _ _ _ 36 immunity immunity NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 10048 # text = Signaling by hToll is shown to occur through sequential recruitment of the adapter molecule MyD88 and the IL-1R-associated kinase. 1 Signaling signal VERB VBG VerbForm=Ger _ _ _ _ 2 by by ADP IN _ _ _ _ _ 3 hToll hToll PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 occur occur VERB VB VerbForm=Inf _ _ _ _ 8 through through ADP IN _ _ _ _ _ 9 sequential sequential ADJ JJ Degree=Pos _ _ _ _ 10 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 adapter adapter NOUN NN Number=Sing _ _ _ _ 14 molecule molecule NOUN NN Number=Sing _ _ _ _ 15 MyD88 Myd88 NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 IL- Il- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 1R- 1R- PUNCT , _ _ _ _ SpaceAfter=No 20 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10049 # text = Tumor necrosis factor receptor-activated factor 6 (TRAF6) and the nuclear factor kappaB (NF-kappaB)-inducing kinase (NIK) are both involved in subsequent steps of NF-kappaB activation. 1 Tumor tumor ADP IN _ _ _ _ _ 2 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 6 6 NUM CD NumType=Card _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 TRAF6 Traf6 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 -kappaB -kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 23 kinase kinase NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 NIK NIK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 both both ADV RB _ _ _ _ _ 29 involved involved ADJ JJ Degree=Pos _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 32 steps step NOUN NNS Number=Plur _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 37 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 10050 # text = Conversely, a dominant negative version of TRAF6 failed to block hToll-induced activation of stress-activated protein kinase/c-Jun NH2-terminal kinases, thus suggesting an early divergence of the two pathways. 1 Conversely Conversely ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 5 negative negative ADJ JJ Degree=Pos _ _ _ _ 6 version version NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 TRAF6 TRAF6 NUM CD NumType=Card _ _ _ _ 9 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 block block VERB VB VerbForm=Inf _ _ _ _ 12 hToll hToll NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 stress stress NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 kinase/ kinase/ PUNCT HYPH _ _ _ _ SpaceAfter=No 22 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 Jun Jun PROPN NNP Number=Sing _ _ _ _ 25 NH2 Nh2 PART TO Abbr=Yes _ _ _ SpaceAfter=No 26 -terminal -terminal ADJ JJ Degree=Pos _ _ _ _ 27 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 thus thus ADV RB _ _ _ _ _ 30 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 31 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 early early ADJ JJ Degree=Pos _ _ _ _ 33 divergence divergence NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 two two NUM CD NumType=Card _ _ _ _ 37 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10051 # text = Document 0030012037 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012037 0030012037 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10052 # text = Cell specific expression of human Bruton's agammaglobulinemia tyrosine kinase gene (Btk) is regulated by Sp1- and Spi-1/PU.1-family members. 1 Cell cell NOUN NN Number=Sing _ _ _ _ 2 specific specific ADJ JJ Degree=Pos _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 Bruton Bruton PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 's 's PART POS _ _ _ _ _ 8 agammaglobulinemia agammaglobulinemia NOUN NN Number=Sing _ _ _ _ 9 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 10 kinase kinase NOUN NN Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 Btk Btk PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 Spi-1/ spi-1/ PUNCT HYPH _ _ _ _ SpaceAfter=No 22 PU.1 Pu.1 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 family family NOUN NN Number=Sing _ _ _ _ 25 members member NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10053 # text = Bruton's agammaglobulinemia tyrosine kinase (Btk) is a cytoplasmic tyrosine kinase involved in the human disease X-linked agammaglobulinemia (XLA). 1 Bruton Bruton PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 's 's PART POS _ _ _ _ _ 3 agammaglobulinemia agammaglobulinemia NOUN NN Number=Sing _ _ _ _ 4 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 Btk Btk PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 12 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 13 kinase kinase NOUN NN Number=Sing _ _ _ _ 14 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 disease disease NOUN NN Number=Sing _ _ _ _ 19 X x SYM SYM _ _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 agammaglobulinemia agammaglobulinemia NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 XLA XLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 10054 # text = The gene is expressed in all hematopoietic cells with the exception of T-cells and plasma cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 all all DET DT _ _ _ _ _ 7 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 exception exception NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 plasma plasma NOUN NN Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 10055 # text = For this expression pattern the first 280 bp upstream of the major transcriptional start site seems to be sufficient. 1 For for ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 pattern pattern VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 7 280 280 NUM CD NumType=Card _ _ _ _ 8 bp bp NOUN NN Number=Sing _ _ _ _ 9 upstream upstream NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 major major ADJ JJ Degree=Pos _ _ _ _ 13 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 14 start start NOUN NN Number=Sing _ _ _ _ 15 site site NOUN NN Number=Sing _ _ _ _ 16 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 sufficient sufficient ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 10056 # text = In vitro footprinting analysis within this part of the promoter revealed two Sp1 binding sites as well as a PU-box. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 3 footprinting footprinting NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 within within ADP IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 part part NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 two two NUM CD NumType=Card _ _ _ _ 13 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 sites site NOUN NNS Number=Plur _ _ _ _ 16 as as ADV RB _ _ _ _ _ 17 well well ADV RB Degree=Pos _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 PU- Pu- NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10057 # text = The transcription factor Spi-1/PU.1 as well as the closely related factor Spi-B bound to the PU-box in B-cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 Spi-1 Spi-1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 PU Pu NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 .1 .1 NUM CD NumType=Card _ _ _ _ 8 as as ADV RB _ _ _ _ _ 9 well well ADV RB Degree=Pos _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 closely closely ADV RB _ _ _ _ _ 13 related related ADJ JJ Degree=Pos _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 Spi Spi NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 B b NOUN NN Number=Sing _ _ _ _ 18 bound bound ADJ JJ Degree=Pos _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 PU PU NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 box box NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 10058 # text = In the erythroleukemia cell line K562, due to the absence of Spi-B, only PU.1 bound to the Btk promoter. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 erythroleukemia erythroleukemia NOUN NN Number=Sing _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 line line NOUN NN Number=Sing _ _ _ _ 6 K562 K562 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 due due ADP IN _ _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 absence absence NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 only only ADV RB _ _ _ _ _ 18 PU.1 PU.1 NUM CD NumType=Card _ _ _ _ 19 bound bound ADJ JJ Degree=Pos _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 Btk Btk PROPN NNP Number=Sing _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 10059 # text = Mutation of either site reduced the expression in transient transfection experiments. 1 Mutation Mutation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 either either DET DT _ _ _ _ _ 4 site site NOUN NN Number=Sing _ _ _ _ 5 reduced reduce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 transient transient ADJ JJ Degree=Pos _ _ _ _ 10 transfection transfection NOUN NN Number=Sing _ _ _ _ 11 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 10060 # text = However, mutation of the PU box had no effect in the T-cell line Jurkat, where none of the Spi-1 family members is expressed. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 mutation mutation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 PU PU PROPN NNP Number=Sing _ _ _ _ 7 box box NOUN NN Number=Sing _ _ _ _ 8 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 no no DET DT _ _ _ _ _ 10 effect effect NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 line line NOUN NN Number=Sing _ _ _ _ 16 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 where where ADV WRB PronType=Rel _ _ _ _ 19 none none NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 family family NOUN NN Number=Sing _ _ _ _ 26 members member NOUN NNS Number=Plur _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 expressed expressed ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 10061 # text = In addition Spi-B as well as PU.1 were able to transactivate Btk expression. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 Spi Spi NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 B b NOUN NN Number=Sing _ _ _ _ 6 as as ADV RB _ _ _ _ _ 7 well well ADV RB Degree=Pos _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 PU.1 PU.1 PROPN NNP Number=Sing _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 able able ADJ JJ Degree=Pos _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 transactivate transactivate VERB VB VerbForm=Inf _ _ _ _ 14 Btk Btk PROPN NNP Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 10062 # text = In fetal liver of PU.1-/- mice, which lack lymphoid and myeloid cells, expression of Btk was reduced two- to threefold but not abolished. 1 In in ADP IN _ _ _ _ _ 2 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 3 liver liver NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 PU.1 PU.1 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT : _ _ _ _ SpaceAfter=No 7 /- /- PUNCT . _ _ _ _ _ 8 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 which which PRON WDT PronType=Rel _ _ _ _ 11 lack lack VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 Btk Btk PROPN NNP Number=Sing _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 threefold threefold VERB VB VerbForm=Inf _ _ _ _ 26 but but CCONJ CC _ _ _ _ _ 27 not not PART RB _ _ _ _ _ 28 abolished abolish VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 10063 # text = Collectively this study shows that expression of the Btk gene is regulated by the combined action of Sp1- and PU.1-family members. 1 Collectively collectively ADV RB _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 shows show VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 Btk Btk PROPN NNP Number=Sing _ _ _ _ 10 gene gene PROPN NNP Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 action action NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 family family NOUN NN Number=Sing _ _ _ _ 24 members member NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10064 # text = Document 0030012047 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012047 0030012047 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10065 # text = Activation of nuclear factor kappa B in human neuroblastoma cell lines. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 neuroblastoma neuroblastoma NOUN NN Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10066 # text = The nuclear factor kappa B (NF-kappa B) is a eukaryotic transcription factor. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 eukaryotic eukaryotic ADJ JJ Degree=Pos _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 10067 # text = In B cells and macrophages it is constitutively present in cell nuclei, whereas in many other cell types, NF-kappa B translocates from cytosol to nucleus as a result of transduction by tumor necrosis factor alpha (TNF alpha), phorbol ester, and other polyclonal signals. 1 In in ADP IN _ _ _ _ _ 2 B b ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 6 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 constitutively constitutively ADV RB _ _ _ _ _ 9 present present ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 nuclei nuclei NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 whereas wherea NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 many many ADJ JJ Degree=Pos _ _ _ _ 17 other other ADJ JJ Degree=Pos _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa PROPN NNP Number=Sing _ _ _ _ 24 B b PROPN NNP Number=Sing _ _ _ _ 25 translocates translocate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 from from ADP IN _ _ _ _ _ 27 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 28 to to PART TO _ _ _ _ _ 29 nucleus nucleus VERB VB VerbForm=Inf _ _ _ _ 30 as as ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 result result NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 transduction transduction NOUN NN Number=Sing _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 tumor tumor NOUN NN Number=Sing _ _ _ _ 37 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 38 factor factor NOUN NN Number=Sing _ _ _ _ 39 alpha alpha NOUN NN Number=Sing _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 TNF Tnf NOUN NN Number=Sing _ _ _ _ 42 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 46 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 other other ADJ JJ Degree=Pos _ _ _ _ 50 polyclonal polyclonal ADJ JJ Degree=Pos _ _ _ _ 51 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 10068 # text = Using neuroblastoma cell lines as models, we have shown that in neural cells NF-kappa B was present in the cytosol and translocated into nuclei as a result of TNF alpha treatment. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 neuroblastoma neuroblastoma NOUN NN Number=Sing _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 lines line NOUN NNS Number=Plur _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 models model NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 9 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 neural neural ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B b PROPN NNP Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 present present ADJ JJ Degree=Pos _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 translocated translocate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 into into ADP IN _ _ _ _ _ 27 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 28 as as ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 result result NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 TNF TNF PROPN NNP Number=Sing _ _ _ _ 33 alpha alpha ADP IN _ _ _ _ _ 34 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 10069 # text = The TNF alpha-activated NF-kappa B was transcriptionally functional. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 TNF TNF PROPN NNP Number=Sing _ _ _ _ 3 alpha- alpha- SYM NFP _ _ _ _ SpaceAfter=No 4 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B b PROPN NNP Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 transcriptionally transcriptionally ADV RB _ _ _ _ _ 11 functional functional ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 10070 # text = NF-kappa B activation by TNF alpha was not correlated with cell differentiation or proliferation. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 TNF TNF PROPN NNP Number=Sing _ _ _ _ 8 alpha alpha PROPN NNP Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 correlated correlate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 15 or or CCONJ CC _ _ _ _ _ 16 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 10071 # text = However, reagents such as nerve growth factor (NGF) and the phorbol ester phorbol 12-myristate 13-acetate (PMA), which induce phenotypical differentiation of the SH-SY5Y neuroblastoma cell line, activated NF-kappa B, but only in that particular cell line. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 reagents reagent NOUN NNS Number=Plur _ _ _ _ 4 such such ADJ JJ Degree=Pos _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 nerve nerve ADJ JJ Degree=Pos _ _ _ _ 7 growth growth NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 NGF NGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 15 ester ester NOUN NN Number=Sing _ _ _ _ 16 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 17 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT : _ _ _ _ SpaceAfter=No 19 myristate myristate NOUN NN Number=Sing _ _ _ _ 20 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT : _ _ _ _ SpaceAfter=No 22 acetate acetate NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 which which PRON WDT PronType=Rel _ _ _ _ 28 induce induce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 phenotypical phenotypical ADJ JJ Degree=Pos _ _ _ _ 30 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 SH Sh NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 SY5Y SY5y NOUN NN Number=Sing _ _ _ _ 36 neuroblastoma neuroblastoma NOUN NN Number=Sing _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 41 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 kappa kappa PROPN NNP Number=Sing _ _ _ _ 44 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 but but CCONJ CC _ _ _ _ _ 47 only only ADV RB _ _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 50 particular particular ADJ JJ Degree=Pos _ _ _ _ 51 cell cell NOUN NN Number=Sing _ _ _ _ 52 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 10072 # text = In a NGF-responsive rat pheochromocytoma cell line, PC12, PMA activated NF-kappa B, whereas NGF did not. 1 In in ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 NGF NGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 6 rat rat NOUN NN Number=Sing _ _ _ _ 7 pheochromocytoma pheochromocytoma NOUN NN Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 PC12 Pc12 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 PMA PMA PROPN NNP Number=Sing _ _ _ _ 14 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 whereas whereas SCONJ IN _ _ _ _ _ 21 NGF NGF PROPN NNP Number=Sing _ _ _ _ 22 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 not not PART RB _ _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 10073 # text = In other neuroblastoma cell lines, such as SK-N-Be(2), the lack of PMA induction of differentiation was correlated with the lack of NF-kappa B activation. 1 In in ADP IN _ _ _ _ _ 2 other other ADJ JJ Degree=Pos _ _ _ _ 3 neuroblastoma neuroblastoma NOUN NN Number=Sing _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 such such ADJ JJ Degree=Pos _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 SK SK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 N N PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 Be be PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 lack lack NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 PMA PMA PROPN NNP Number=Sing _ _ _ _ 22 induction induction NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 25 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 26 correlated correlate ADJ JJ Degree=Pos _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 lack lack NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappa kappa NOUN NN Number=Sing _ _ _ _ 34 B b NOUN NN Number=Sing _ _ _ _ 35 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 10074 # text = We found, moreover, that in SK-N-Be(2) cells protein kinase C (PKC) enzymatic activity was much lower compared with that in a control cell line and that the low PKC enzymatic activity was due to low PKC protein expression. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 moreover moreover ADV RB _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 SK SK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 N N PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 Be be PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 kinase kinase NOUN NN Number=Sing _ _ _ _ 19 C C PROPN NNP Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 enzymatic enzymatic ADJ JJ Degree=Pos _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ _ 25 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 26 much much ADV RB _ _ _ _ _ 27 lower lower ADJ JJR Degree=Cmp _ _ _ _ 28 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 control control NOUN NN Number=Sing _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 line line NOUN NN Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 that that SCONJ IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 low low ADJ JJ Degree=Pos _ _ _ _ 40 PKC Pkc NOUN NN Number=Sing _ _ _ _ 41 enzymatic enzymatic ADJ JJ Degree=Pos _ _ _ _ 42 activity activity NOUN NN Number=Sing _ _ _ _ 43 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 44 due due ADP IN _ _ _ _ _ 45 to to ADP IN _ _ _ _ _ 46 low low ADJ JJ Degree=Pos _ _ _ _ 47 PKC PKC NOUN NN Number=Sing _ _ _ _ 48 protein protein NOUN NN Number=Sing _ _ _ _ 49 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 10075 # text = NF-kappa B was not activated by retinoic acid, which induced morphological differentiation of all the neuroblastoma cell lines used in the present study. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 10 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 morphological morphological ADJ JJ Degree=Pos _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 all all DET PDT _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 neuroblastoma neuroblastoma NOUN NN Number=Sing _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 lines line NOUN NNS Number=Plur _ _ _ _ 22 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 present present ADJ JJ Degree=Pos _ _ _ _ 26 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 10076 # text = Thus, NF-kappa B activation was not required for neuroblastoma cell differentiation. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 neuroblastoma neuroblastoma NOUN NN Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 10077 # text = Furthermore, the results obtained with TNF alpha proved that NF-kappa B activation was not sufficient for induction of neuroblastoma differentiation. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 obtained obtain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 TNF TNF PROPN NNP Number=Sing _ _ _ _ 8 alpha alpha ADV RB _ _ _ _ _ 9 proved prove VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 not not PART RB _ _ _ _ _ 18 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 induction induction NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 neuroblastoma neuroblastoma NOUN NN Number=Sing _ _ _ _ 23 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10078 # text = Document 0030012050 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012050 0030012050 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10079 # text = Specific NF-kappa B subunits act in concert with Tat to stimulate human immunodeficiency virus type 1 transcription. 1 Specific specific ADJ JJ Degree=Pos _ _ _ _ 2 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 subunits subunit NOUN NNS Number=Plur _ _ _ _ 7 act act VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 concert concert NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 Tat Tat PROPN NNP Number=Sing _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ _ 17 type type NOUN NN Number=Sing _ _ _ _ 18 1 1 NUM CD NumType=Card _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10080 # text = NF-kappa B is a protein complex which functions in concert with the tat-I gene product to stimulate human immunodeficiency virus (HIV) transcription. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 complex complex NOUN NN Number=Sing _ _ _ _ 9 which which PRON WDT PronType=Rel _ _ _ _ 10 functions function VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 concert concert NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 tat tat NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 product product NOUN NN Number=Sing _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 24 virus virus NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 10081 # text = To determine whether specific members of the NF-kappa B family contribute to this effect, we have examined the abilities of different NF-kappa B subunits to act with Tat-I to stimulate transcription of HIV in Jurkat T-leukemia cells. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 members member NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 family family NOUN NN Number=Sing _ _ _ _ 13 contribute contribute NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 16 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 19 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 abilities abilitie NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 different different ADJ JJ Degree=Pos _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa PROPN NNP Number=Sing _ _ _ _ 28 B b PROPN NNP Number=Sing _ _ _ _ 29 subunits subunit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 to to PART TO _ _ _ _ _ 31 act act VERB VB VerbForm=Inf _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 Tat Tat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT , _ _ _ _ SpaceAfter=No 35 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 36 to to PART TO _ _ _ _ _ 37 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 38 transcription transcription NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 HIV HIV PROPN NNP Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 43 T- T- PUNCT , _ _ _ _ SpaceAfter=No 44 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 45 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 10082 # text = We have found that the p49(100) DNA binding subunit, together with p65, can act in concert with Tat-I to stimulate the expression of HIV-CAT plasmid. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 p49 p49 NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 100 100 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ _ 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 subunit subunit NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 together together ADV RB _ _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 can can AUX MD VerbForm=Fin _ _ _ _ 19 act act VERB VB VerbForm=Inf _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 concert concert NOUN NN Number=Sing _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 Tat Tat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 CAT cat PROPN NNP Number=Sing _ _ _ _ 34 plasmid plasmid NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 10083 # text = Little effect was observed with 50-kDa forms of p105 NF-kappa B or rel, in combination with p65 or full-length c-rel, which do not stimulate the HIV enhancer in these cells. 1 Little little ADJ JJ Degree=Pos _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kDa kDa NOUN NN Number=Sing _ _ _ _ 9 forms form NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 p105 p105 NUM CD NumType=Card _ _ _ _ 12 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 rel rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 combination combination NOUN NN Number=Sing _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 p65 p65 NUM CD NumType=Card _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 full full ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 length length NOUN NN Number=Sing _ _ _ _ 27 c- c- PUNCT , _ _ _ _ SpaceAfter=No 28 rel rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 which which PRON WDT PronType=Rel _ _ _ _ 31 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 32 not not PART RB _ _ _ _ _ 33 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 HIV Hiv PROPN NNP Number=Sing _ _ _ _ 36 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 10084 # text = These findings suggest that the combination of p49(100) and p65 NF-kappa B can act in concert with the tat-I gene product to stimulate the synthesis of HIV RNA. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 combination combination NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 p49 p49 NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 100 100 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 p65 p65 NUM CD NumType=Card _ _ _ _ 14 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 can can AUX MD VerbForm=Fin _ _ _ _ 19 act act VERB VB VerbForm=Inf _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 concert concert NOUN NN Number=Sing _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 tat tat NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 27 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 product product NOUN NN Number=Sing _ _ _ _ 29 to to PART TO _ _ _ _ _ 30 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 HIV HIV PROPN NNP Number=Sing _ _ _ _ 35 RNA. RNA. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10085 # text = Document 0030012057 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012057 0030012057 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10086 # text = Cobalt chloride-induced signaling in endothelium leading to the augmented adherence of sickle red blood cells and transendothelial migration of monocyte-like HL-60 cells is blocked by PAF-receptor antagonist. 1 Cobalt Cobal PROPN NNP Number=Sing _ _ _ _ 2 chloride chloride NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 signaling signaling NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 endothelium endothelium NOUN NN Number=Sing _ _ _ _ 8 leading lead VERB VBG VerbForm=Ger _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 augmented augment VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 adherence adherence NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 sickle sickle ADJ JJ Degree=Pos _ _ _ _ 15 red red ADJ JJ Degree=Pos _ _ _ _ 16 blood blood NOUN NN Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 transendothelial transendothelial ADJ JJ Degree=Pos _ _ _ _ 20 migration migration NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 like like ADJ JJ Degree=Pos _ _ _ _ 25 HL HL NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 60 60 NUM CD NumType=Card _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 PAF PAF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 receptor receptor NOUN NN Number=Sing _ _ _ _ 35 antagonist antagonist NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10087 # text = In response to hypoxia, sickle red blood cells (SS RBC) and leukocytes exhibit increased adherence to the vascular endothelium, while diapedesis of leukocytes through the blood vessel increases. 1 In in ADP IN _ _ _ _ _ 2 response response NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 hypoxia hypoxia PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 sickle sickle ADJ JJ Degree=Pos _ _ _ _ 7 red red ADJ JJ Degree=Pos _ _ _ _ 8 blood blood NOUN NN Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 SS Ss PROPN NNP Number=Sing _ _ _ _ 12 RBC RBC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 16 exhibit exhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 adherence adherence NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 22 endothelium endothelium NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 while while SCONJ IN _ _ _ _ _ 25 diapedesis diapedesis NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 28 through through ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 blood blood NOUN NN Number=Sing _ _ _ _ 31 vessel vessel NOUN NN Number=Sing _ _ _ _ 32 increases increase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 10088 # text = However, the cellular signaling pathway(s) caused by hypoxia is poorly understood. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 5 signaling signaling NOUN NN Number=Sing _ _ _ _ 6 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 s s X AFX _ _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 caused cause VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 hypoxia hypoxia NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 poorly poorly ADV RB _ _ _ _ _ 15 understood understand VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 10089 # text = We utilized CoCl2 as a mimetic molecule for hypoxia to study cellular signaling pathways. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 utilized utilize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 CoCl2 CoCl2 NUM CD NumType=Card _ _ _ _ 4 as as ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 mimetic mimetic ADJ JJ Degree=Pos _ _ _ _ 7 molecule molecule NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 hypoxia hypoxia NOUN NN Number=Sing _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 study study VERB VB VerbForm=Inf _ _ _ _ 12 cellular celular ADJ JJ Degree=Pos _ _ _ _ 13 signaling signal NOUN NN Number=Sing _ _ _ _ 14 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 10090 # text = We found that in human umbilical vein endothelial cells (HUVEC), CoCl2 at 2 mM concentration induced the surface expression of a subset of CAMs (VCAM-1) and activation of transcription factor NF-kappaB in the nuclear extracts of HUVEC. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 7 vein vein NOUN NN Number=Sing _ _ _ _ 8 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 HUVEC HUVEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 CoCl2 CoCl2 NUM CD NumType=Card _ _ _ _ 15 at at ADP IN _ _ _ _ _ 16 2 2 NUM CD NumType=Card _ _ _ _ 17 mM mm PROPN NNP Number=Sing _ _ _ _ 18 concentration concentration NOUN NN Number=Sing _ _ _ _ 19 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 surface surface NOUN NN Number=Sing _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 subset subset NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 CAMs Cams NOUN NNS Number=Plur _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 VCAM VCAM NUM CD NumType=Card _ _ _ SpaceAfter=No 30 - - SYM SYM _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 activation activation NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 transcription transcription NOUN NN Number=Sing _ _ _ _ 37 factor factor NOUN NN Number=Sing _ _ _ _ 38 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 44 extracts extract NOUN NNS Number=Plur _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 HUVEC HUVEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 10091 # text = Furthermore, CoCl2 also caused time-dependent tyrosine phosphorylation of mitogen-activated protein (MAP) kinase isoform ERK2 without significantly affecting ERK1, indicating ERK2 is the preferred substrate for upstream kinase of the MAPK pathway. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 CoCl2 CoCl2 PART TO Abbr=Yes _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 9 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 10 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 mitogen mitogen NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT : _ _ _ _ SpaceAfter=No 14 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 MAP map PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 kinase kinase NOUN NN Number=Sing _ _ _ _ 20 isoform isoform NOUN NN Number=Sing _ _ _ _ 21 ERK2 Erk2 NOUN NN Number=Sing _ _ _ _ 22 without without SCONJ IN _ _ _ _ _ 23 significantly significantly ADV RB _ _ _ _ _ 24 affecting affect VERB VBG VerbForm=Ger _ _ _ _ 25 ERK1 ERK1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 28 ERK2 ERK2 NOUN NN Number=Sing _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 preferred preferred ADJ JJ Degree=Pos _ _ _ _ 32 substrate substrate NOUN NN Number=Sing _ _ _ _ 33 for for ADP IN _ _ _ _ _ 34 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 35 kinase kinase NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 MAPK MAPK PROPN NNP Number=Sing _ _ _ _ 39 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 10092 # text = Inhibitors of MAP kinase (PD98059) or platelet-activating factor (PAF)- receptor antagonist (CV3988) inhibited the CoCl2-induced NF-kappaB activation and VCAM-1 expression. 1 Inhibitors Inhibitor NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 MAP map NOUN NN Number=Sing _ _ _ _ 4 kinase kinase NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 PD98059 PD98059 NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 activating activating NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 PAF PAF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 - - PUNCT : _ _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 antagonist antagonist NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 CV3988 CV3988 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 CoCl2 Cocl2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 10093 # text = Augmented expression of VCAM-1 led to increased SS RBC adhesion, inhibitable by a VCAM-1 antibody. 1 Augmented Augmented VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 increased increase VERB VB VerbForm=Inf _ _ _ _ 10 SS SS PROPN NNP Number=Sing _ _ _ _ 11 RBC RBC PROPN NNP Number=Sing _ _ _ _ 12 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 inhibitable inhibitable ADJ JJ Degree=Pos _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 10094 # text = Additionally, CoCl2 caused a two- to threefold increase in the rate of transendothelial migration of monocyte-like HL-60 cells and a twentyfold increase in phosphorylation of platelet endothelial cell adhesion molecules (PECAM-1). 1 Additionally additionally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 CoCl2 CoCl2 PART TO Abbr=Yes _ _ _ _ 4 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 threefold threefold VERB VB VerbForm=Inf _ _ _ _ 10 increase increase NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 rate rate NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 transendothelial transendothelial ADJ JJ Degree=Pos _ _ _ _ 16 migration migration NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 like like ADJ JJ Degree=Pos _ _ _ _ 21 HL HL NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 60 60 NUM CD NumType=Card _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 twentyfold twentyfold NOUN NN Number=Sing _ _ _ _ 28 increase increase NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 platelet platelet NOUN NN Number=Sing _ _ _ _ 33 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 36 molecules molecule NOUN NNS Number=Plur _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 PECAM PECAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 10095 # text = The transendothelial migration of monocytes was inhibited by an antibody to PECAM-1. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transendothelial transendothelial ADJ JJ Degree=Pos _ _ _ _ 3 migration migration NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 antibody antibody NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 PECAM PECAM NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - SYM SYM _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 10096 # text = Both phosphorylation of PECAM-1 and transendothelial migration of monocytes in response to CoCl2 were inhibited by protein kinase inhibitor (GF109203X) and augmented by protein phosphatase inhibitor (Calyculin 1 Both both DET DT _ _ _ _ _ 2 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 PECAM PECAM NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 transendothelial transendothelial ADJ JJ Degree=Pos _ _ _ _ 9 migration migration NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 response response NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 CoCl2 CoCl2 NUM CD NumType=Card _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 kinase kinase NOUN NN Number=Sing _ _ _ _ 21 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 GF109203X GF109203X PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 augmented augment VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 protein protein NOUN NN Number=Sing _ _ _ _ 29 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 30 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 Calyculin Calyculin PROPN NNP Number=Sing _ _ _ _ # sent_id = 10097 # text = A). 1 A A NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 3 . . PUNCT . _ _ _ _ _ # sent_id = 10098 # text = Our data suggests that CoCl2-induced cellular signals directing increased expression of VCAM-1 in HUVEC involve downstream activation of MAP kinase and NF-kappaB, while the phosphorylation of PECAM-1 occurs as a result of activation of PKC. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 CoCl2 Cocl2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 9 signals signal NOUN NNS Number=Plur _ _ _ _ 10 directing direct VERB VBG VerbForm=Ger _ _ _ _ 11 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 HUVEC HUVEC PROPN NNP Number=Sing _ _ _ _ 19 involve involve ADJ JJ Degree=Pos _ _ _ _ 20 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 MAP map NOUN NN Number=Sing _ _ _ _ 24 kinase kinase NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 while while SCONJ IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 PECAM PECAM NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ _ 37 occurs occur NOUN NNS Number=Plur _ _ _ _ 38 as as ADP IN _ _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 result result NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 activation activation NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 10099 # text = We conclude that PAF-receptor antagonist inhibits the CoCl2- or hypoxia-induced increase in the adhesion of SS RBC, PECAM-1 phosphorylation, and the concomitant transendothelial migration of monocytes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 PAF Paf NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 antagonist antagonist NOUN NN Number=Sing _ _ _ _ 8 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 CoCl2 Cocl2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 hypoxia hypoxia NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 increase increase NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 SS SS PROPN NNP Number=Sing _ _ _ _ 22 RBC RBC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 PECAM PECAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 concomitant concomitant ADJ JJ Degree=Pos _ _ _ _ 32 transendothelial transendothelial ADJ JJ Degree=Pos _ _ _ _ 33 migration migration NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10100 # text = Document 0030012061 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012061 0030012061 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10101 # text = Tap: a novel cellular protein that interacts with tip of herpesvirus saimiri and induces lymphocyte aggregation. 1 Tap tap NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 novel novel NOUN NN Number=Sing _ _ _ _ 5 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 interacts interact VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 tip tip NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 herpesvirus herpesvirus NOUN NN Number=Sing _ _ _ _ 13 saimiri saimirus NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 induces induces NOUN NNS Number=Plur _ _ _ _ 16 lymphocyte lymphocyte VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 aggregation aggregation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10102 # text = Tip of herpesvirus saimiri associates with Lck and down-regulates Lck-mediated activation. 1 Tip tip NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 herpesvirus herpesvirus NOUN NN Number=Sing _ _ _ _ 4 saimiri saimiri NOUN NN Number=Sing _ _ _ _ 5 associates associate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 Lck Lck PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 down down ADV RB _ _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 Lck-mediated Lck-mediated ADJ JJ Degree=Pos _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 10103 # text = We identified a novel cellular Tip-associated protein (Tap) by a yeast two-hybrid screen. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 novel novel NOUN NN Number=Sing _ _ _ _ 5 cellular celular ADJ JJ Degree=Pos _ _ _ _ 6 Tip tip NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 -associated -associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 Tap tap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 yeast yeast ADJ JJS Degree=Sup _ _ _ _ 15 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 hybrid hybrid NOUN NN Number=Sing _ _ _ _ 18 screen screen NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 10104 # text = Tap associated with Tip following transient expression in COS-1 cells and stable expression in human Jurkat-T cells. 1 Tap tap NOUN NN Number=Sing _ _ _ _ 2 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 Tip tip PROPN NNP Number=Sing _ _ _ _ 5 following follow VERB VBG VerbForm=Ger _ _ _ _ 6 transient transient ADJ JJ Degree=Pos _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 COS COS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 stable stable ADJ JJ Degree=Pos _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 T T PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10105 # text = Expression of Tip and Tap in Jurkat-T cells induced dramatic cell aggregation. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Tip tip PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 Tap tap PROPN NNP Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 T T PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 dramatic dramatic ADJ JJ Degree=Pos _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 aggregation aggregation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 10106 # text = Aggregation was likely caused by the up-regulated surface expression of adhesion molecules including integrin alpha, L-selectin, ICAM-3, and H-CAM. 1 Aggregation aggregation NOUN NN Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 likely likely ADV RB _ _ _ _ _ 4 caused cause VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 surface surface NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 14 molecules molecule NOUN NNS Number=Plur _ _ _ _ 15 including include VERB VBG VerbForm=Ger _ _ _ _ 16 integrin integrin ADP IN _ _ _ _ _ 17 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 L-selectin L-selectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 ICAM ICAM NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - SYM SYM _ _ _ _ SpaceAfter=No 23 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 H h NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 CAM CAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 10107 # text = Furthermore, NF-kappaB transcriptional factor of aggregated cells had approximately 40-fold higher activity than that of parental cells. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 aggregated aggregated ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 approximately approximately ADV RB _ _ _ _ _ 13 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 fold fold VERB VB VerbForm=Inf _ _ _ _ 16 higher higher ADJ JJR Degree=Cmp _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 than than ADP IN _ _ _ _ _ 19 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 parental parental ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 10108 # text = Thus, Tap is likely to be an important cellular mediator of Tip function in T cell transformation by herpesvirus saimiri. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Tap tap PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 likely likely ADJ JJ Degree=Pos _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 important important ADJ JJ Degree=Pos _ _ _ _ 10 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 11 mediator mediator NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Tip tip NOUN NN Number=Sing _ _ _ _ 14 function function NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 transformation transformation NOUN NN Number=Sing _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 herpesvirus herpesvirus NOUN NN Number=Sing _ _ _ _ 21 saimiri saimiri NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10109 # text = Document 0030012064 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012064 0030012064 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10110 # text = Cell-type-specific regulation of the human tumor necrosis factor alpha gene in B cells and T cells by NFATp and ATF-2/JUN. 1 Cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 type-specific type-specific ADJ JJ Degree=Pos _ _ _ _ 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 tumor tumor NOUN NN Number=Sing _ _ _ _ 9 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 alpha alpha ADP IN _ _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 B b ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 T t ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 ATF ATF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 26 JUN JUN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10111 # text = The human tumor necrosis factor alpha (TNF-alpha) gene is one of the earliest genes transcribed after the stimulation of a B cell through its antigen receptor or via the CD-40 pathway. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 tumor tumor NOUN NN Number=Sing _ _ _ _ 4 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 one one NUM CD NumType=Card _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 earliest earliest ADJ JJS Degree=Sup _ _ _ _ 18 genes gene NOUN NNS Number=Plur _ _ _ _ 19 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 after after ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 B b ADJ JJ Degree=Pos _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 through through ADP IN _ _ _ _ _ 28 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 29 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 30 receptor receptor NOUN NN Number=Sing _ _ _ _ 31 or or CCONJ CC _ _ _ _ _ 32 via via ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 40 40 NUM CD NumType=Card _ _ _ _ 37 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 10112 # text = In both cases, induction of TNF-alpha gene transcription can be blocked by the immunosuppressants cyclosporin A and FK506, which suggested a role for the NFAT family of proteins in the regulation of the gene in B cells. 1 In in ADP IN _ _ _ _ _ 2 both both DET DT _ _ _ _ _ 3 cases case NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 induction induction NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 alpha alpha NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 can can AUX MD VerbForm=Fin _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 immunosuppressants immunosuppressant NOUN NNS Number=Plur _ _ _ _ 18 cyclosporin cyclosporin ADP IN _ _ _ _ _ 19 A a PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 FK506 FK506 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 role role NOUN NN Number=Sing _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 30 family family NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 proteins protein NOUN NNS Number=Plur _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 regulation regulation NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 gene gene NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 B b ADJ JJ Degree=Pos _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 10113 # text = Furthermore, in T cells, two molecules of NFATp bind to the TNF-alpha promoter element kappa 3 in association with ATF-2 and Jun proteins bound to an immediately adjacent cyclic AMP response element (CRE) site. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 molecules molecule NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 11 bind bind NOUN NN Number=Sing _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 element element NOUN NN Number=Sing _ _ _ _ 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 3 3 NUM CD NumType=Card _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 association association NOUN NN Number=Sing _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 ATF ATF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 Jun Jun PROPN NNP Number=Sing _ _ _ _ 29 proteins protein NOUN NNS Number=Plur _ _ _ _ 30 bound bound VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 immediately immediately ADV RB _ _ _ _ _ 34 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 35 cyclic cyclic ADJ JJ Degree=Pos _ _ _ _ 36 AMP Amp NOUN NN Number=Sing _ _ _ _ 37 response response NOUN NN Number=Sing _ _ _ _ 38 element element NOUN NN Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 CRE CRE NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 10114 # text = Here, using the murine B-cell lymphoma cell line A20, we show that the TNF-alpha gene is regulated in a cell-type-specific manner. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 using use VERB VBG VerbForm=Ger _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 murine murine NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 line line NOUN NN Number=Sing _ _ _ _ 12 A20 A20 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 15 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 alpha alpha NOUN NN Number=Sing _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 specific specific ADJ JJ Degree=Pos _ _ _ _ 31 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 10115 # text = In A20 B cells, the TNF-alpha gene is not regulated by NFATp bound to the kappa 3 element. 1 In in ADP IN _ _ _ _ _ 2 A20 A20 NUM CD NumType=Card _ _ _ _ 3 B b ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 alpha alpha NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 16 bound bound ADJ JJ Degree=Pos _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 3 3 NUM CD NumType=Card _ _ _ _ 21 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10116 # text = Instead, ATF-2 and Jun proteins bind to the composite kappa 3/CRE site and NFATp binds to a newly identified second NFAT site centered at -76 nucleotides relative to the TNF-alpha transcription start site. 1 Instead instead ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 ATF ATF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 Jun Jun PROPN NNP Number=Sing _ _ _ _ 8 proteins protein NOUN NNS Number=Plur _ _ _ _ 9 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 composite composite NOUN NN Number=Sing _ _ _ _ 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 3/CRE 3/cre NOUN NN Number=Sing _ _ _ _ 15 site site NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 NFATp NFATp NOUN NN Number=Sing _ _ _ _ 18 binds bind NOUN NNS Number=Plur _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 newly newly ADV RB _ _ _ _ _ 22 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 24 NFAT Nfat NOUN NN Number=Sing _ _ _ _ 25 site site NOUN NN Number=Sing _ _ _ _ 26 centered center VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 at at ADP IN _ _ _ _ _ 28 - - SYM SYM _ _ _ _ SpaceAfter=No 29 76 76 NUM CD NumType=Card _ _ _ _ 30 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 31 relative relative ADV RB _ _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 alpha alpha NOUN NN Number=Sing _ _ _ _ 37 transcription transcription NOUN NN Number=Sing _ _ _ _ 38 start start NOUN NN Number=Sing _ _ _ _ 39 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 10117 # text = This new site plays a critical role in the calcium-mediated, cyclosporin A-sensitive induction of TNF-alpha in both A20 B cells and Ar-5 cells. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 new new ADJ JJ Degree=Pos _ _ _ _ 3 site site NOUN NN Number=Sing _ _ _ _ 4 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 critical critical ADJ JJ Degree=Pos _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 calcium- calcium- SYM SYM _ _ _ _ SpaceAfter=No 11 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 14 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 17 induction induction NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 alpha alpha NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 both both CCONJ CC _ _ _ _ _ 24 A20 A20 NUM CD NumType=Card _ _ _ _ 25 B b ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 Ar ar PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 5 5 NUM CD NumType=Card _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 10118 # text = Consistent with these results, quantitative DNase footprinting of the TNF-alpha promoter using increasing amounts of recombinant NFATp demonstrated that the -76 site binds to NFATp with a higher affinity than the kappa 3 site. 1 Consistent consistent ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 quantitative quantitative ADJ JJ Degree=Pos _ _ _ _ 7 DNase DNase NOUN NN Number=Sing _ _ _ _ 8 footprinting footprinting NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 using use VERB VBG VerbForm=Ger _ _ _ _ 16 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 17 amounts amount NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 20 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 21 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 that that SCONJ IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 76 76 NUM CD NumType=Card _ _ _ _ 26 site site NOUN NN Number=Sing _ _ _ _ 27 binds bind NOUN NNS Number=Plur _ _ _ _ 28 to to PART TO _ _ _ _ _ 29 NFATp NFATp VERB VB VerbForm=Inf _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 higher higher ADJ JJR Degree=Cmp _ _ _ _ 33 affinity affinity NOUN NN Number=Sing _ _ _ _ 34 than than ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 kappa kappa NOUN NN Number=Sing _ _ _ _ 37 3 3 NUM CD NumType=Card _ _ _ _ 38 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 10119 # text = Two other previously unrecognized NFATp-binding sites in the proximal TNF-alpha promoter were also identified by this analysis. 1 Two two NUM CD NumType=Card _ _ _ _ 2 other other ADJ JJ Degree=Pos _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 unrecognized unrecognize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 NFATp NFATp NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 binding binding VERB VBG VerbForm=Ger _ _ _ _ 8 sites site NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 12 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 alpha alpha NOUN NN Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 also also ADV RB _ _ _ _ _ 18 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 21 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10120 # text = Thus, through the differential use of the same promoter element, the composite kappa 3/CRE site, the TNF-alpha gene is regulated in a cell-type-specific manner in response to the same extracellular signal. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 through through ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 differential differential ADJ JJ Degree=Pos _ _ _ _ 6 use use NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 same same ADJ JJ Degree=Pos _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 composite composite ADJ JJ Degree=Pos _ _ _ _ 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 3/CRE 3/cre NOUN NN Number=Sing _ _ _ _ 17 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 alpha alpha NOUN NN Number=Sing _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 type-specific type-specific ADJ JJ Degree=Pos _ _ _ _ 31 manner manner NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 response response NOUN NN Number=Sing _ _ _ _ 34 to to ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 same same ADJ JJ Degree=Pos _ _ _ _ 37 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 38 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10121 # text = Document 0030012069 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012069 0030012069 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10122 # text = Regulation of human epsilon germline transcription: role of B-cell-specific activator protein. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 5 germline germline NOUN NN Number=Sing _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 : : PUNCT : _ _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 B- B- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT : _ _ _ _ SpaceAfter=No 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 activator activator NOUN NN Number=Sing _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10123 # text = Germline transcripts initiate from promoters upstream of the immunoglobulin switch region, and are necessary to target the appropriate switch region for recombination and switching. 1 Germline Germline ADJ JJ Degree=Pos _ _ _ _ 2 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 3 initiate initiate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 promoters promoter NOUN NNS Number=Plur _ _ _ _ 6 upstream upstream NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 10 switch switch NOUN NN Number=Sing _ _ _ _ 11 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 target target VERB VB VerbForm=Inf _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 appropriate appropriate ADJ JJ Degree=Pos _ _ _ _ 20 switch switch NOUN NN Number=Sing _ _ _ _ 21 region region NOUN NN Number=Sing _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 recombination recombination NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 switching switch VERB VBG Tense=Pres|VerbForm=Part _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 10124 # text = Different cytokines activate transcription at the appropriate germline promoter. 1 Different different ADJ JJ Degree=Pos _ _ _ _ 2 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 3 activate activate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 at at ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 appropriate appropriate ADJ JJ Degree=Pos _ _ _ _ 8 germline germline NOUN NN Number=Sing _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 10125 # text = Because binding sites for B-cell-specific activator protein (BSAP) are located upstream of several switch regions in the immunoglobulin heavy chain gene cluster, BSAP might play a role in the regulation of germline transcription and isotype switching. 1 Because because SCONJ IN _ _ _ _ _ 2 binding bind VERB VBG VerbForm=Ger _ _ _ _ 3 sites site NOUN NNS Number=Plur _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 activator activator NOUN NN Number=Sing _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 BSAP Bsap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 upstream upstream NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 several several ADJ JJ Degree=Pos _ _ _ _ 19 switch switch NOUN NN Number=Sing _ _ _ _ 20 regions region NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 24 heavy heavy ADJ JJ Degree=Pos _ _ _ _ 25 chain chain NOUN NN Number=Sing _ _ _ _ 26 gene gene NOUN NN Number=Sing _ _ _ _ 27 cluster cluster NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 BSAP Bsap NOUN NN Number=Sing _ _ _ _ 30 might might AUX MD VerbForm=Fin _ _ _ _ 31 play play VERB VB VerbForm=Inf _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 role role NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 regulation regulation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 germline germline NOUN NN Number=Sing _ _ _ _ 39 transcription transcription NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 isotype isotype NOUN NN Number=Sing _ _ _ _ 42 switching switch VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 10126 # text = We investigated whether BSAP plays a role in the transcriptional regulation of the epsilon germline promoter in human B cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 BSAP BSAP PROPN NNP Number=Sing _ _ _ _ 5 plays plays VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 regulation regulation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 15 germline germline NOUN NN Number=Sing _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 B b ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 10127 # text = Our results showed that BSAP plays a role in both IL-4-dependent induction and CD40-mediated upregulation of human epsilon germline transcription. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 BSAP BSAP PROPN NNP Number=Sing _ _ _ _ 6 plays plays VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 both both DET DT _ _ _ _ _ 11 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 CD40 CD40 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 25 germline germline NOUN NN Number=Sing _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 10128 # text = BSAP is unique among the transcription factors that regulate epsilon germline expression, because it is B cell specific, and is at the merging point of two signalling pathways that are critical for IgE switching. 1 BSAP Bsap SYM NFP _ _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 unique unique ADJ JJ Degree=Pos _ _ _ _ 4 among among ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factors factor NOUN NNS Number=Plur _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 epsilon epsilon ADP IN _ _ _ _ _ 11 germline germline NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 because because SCONJ IN _ _ _ _ _ 15 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 B b ADJ JJ Degree=Pos _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 at at ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 merging merging NOUN NN Number=Sing _ _ _ _ 26 point point NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 two two NUM CD NumType=Card _ _ _ _ 29 signalling signalling NOUN NN Number=Sing _ _ _ _ 30 pathways pathway NOUN NNS Number=Plur _ _ _ _ 31 that that PRON WDT PronType=Rel _ _ _ _ 32 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 critical critical ADJ JJ Degree=Pos _ _ _ _ 34 for for SCONJ IN _ _ _ _ _ 35 IgE Ige PROPN NNP Number=Sing _ _ _ _ 36 switching switching VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10129 # text = Document 0030012079 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012079 0030012079 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10130 # text = Activation of the human delta-globin gene promoter in primary adult erythroid cells. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 delta delta NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 globin globin NOUN NN Number=Sing _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 primary primary ADJ JJ Degree=Pos _ _ _ _ 12 adult adult NOUN NN Number=Sing _ _ _ _ 13 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10131 # text = Restoration of the CCAAT box or insertion of an erythroid Kruppel-like factor (EKLF) binding site in the delta promoter activates its expression in several erythroid cell lines. 1 Restoration restoration NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 CCAAT Ccaat NOUN NN Number=Sing _ _ _ _ 5 box box NOUN NN Number=Sing _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 insertion insertion NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 11 Kruppel Kruppel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 like like ADJ JJ Degree=Pos _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 EKLF EKLF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 site site NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 delta delta PROPN NNP Number=Sing _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ _ 24 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 several several ADJ JJ Degree=Pos _ _ _ _ 29 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 10132 # text = We extended these studies using a novel primary human adult erythroid cell (hAEC) system to investigate these effects at the late erythroblast stage. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 extended extend VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ _ 5 using use VERB VBG VerbForm=Ger _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 novel novel NOUN NN Number=Sing _ _ _ _ 8 primary primary ADJ JJ Degree=Pos _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 adult adult NOUN NN Number=Sing _ _ _ _ 11 erythroid erythroid NOUN NN Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 hAEC hAEC NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 system system NOUN NN Number=Sing _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 19 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 20 effects effect NOUN NNS Number=Plur _ _ _ _ 21 at at ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 late late ADJ JJ Degree=Pos _ _ _ _ 24 erythroblast erythroblast ADJ JJ Degree=Pos _ _ _ _ 25 stage stage NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 10133 # text = Restoration of the CCAAT box at -70 bp, or insertion of an EKLF binding site at -85 bp or -95 bp in the promoter significantly increased delta globin gene expression in hAEC. 1 Restoration restoration NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 CCAAT Ccaat PROPN NNP Number=Sing _ _ _ _ 5 box box NOUN NN Number=Sing _ _ _ _ 6 at at ADP IN _ _ _ _ _ 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 70 70 NUM CD NumType=Card _ _ _ _ 9 bp bp NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 insertion insertion NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 EKLF EKLF PROPN NNP Number=Sing _ _ _ _ 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 site site NOUN NN Number=Sing _ _ _ _ 18 at at ADP IN _ _ _ _ _ 19 - - SYM SYM _ _ _ _ SpaceAfter=No 20 85 85 NUM CD NumType=Card _ _ _ _ 21 bp bp NOUN NN Number=Sing _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 95 95 NUM CD NumType=Card _ _ _ _ 25 bp bp NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ _ 29 significantly significantly ADV RB _ _ _ _ _ 30 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 delta delof NOUN NN Number=Sing _ _ _ _ 32 globin globin ADP IN _ _ _ _ _ 33 gene gene ADJ JJ Degree=Pos _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 hAEC hAEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 10134 # text = Our results demonstrate that the altered CCAAT box (CCAAC) and the lack of an EKLF binding site in delta-globin contribute to its low level of expression in the hAEC model as well. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 altered alter VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 CCAAT Ccaat NOUN NN Number=Sing _ _ _ _ 8 box box NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 CCAAC CCAAC NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 lack lack NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 EKLF EKLF PROPN NNP Number=Sing _ _ _ _ 18 binding binding VERB VBG VerbForm=Ger _ _ _ _ 19 site site NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 delta delta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 globin globin ADJ JJ Degree=Pos _ _ _ _ 24 contribute contribute NOUN NN Number=Sing _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 27 low low ADJ JJ Degree=Pos _ _ _ _ 28 level level NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 hAEC hAEC PROPN NNP Number=Sing _ _ _ _ 34 model model NOUN NN Number=Sing _ _ _ _ 35 as as ADV RB _ _ _ _ _ 36 well well ADV RB Degree=Pos _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10135 # text = Document 0030012083 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012083 0030012083 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10136 # text = Induction of a functional vitamin D receptor in all-trans-retinoic acid-induced monocytic differentiation of M2-type leukemic blast cells. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 functional functional ADJ JJ Degree=Pos _ _ _ _ 5 vitamin vitamin NOUN NN Number=Sing _ _ _ _ 6 D would NOUN NN Number=Sing _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 all all DET DT _ _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 14 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 18 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 M2 m2 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 type type NOUN NN Number=Sing _ _ _ _ 23 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 24 blast blast ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10137 # text = Different types of acute myeloid leukemia blast cells were induced to differentiate in vitro with all-trans-retinoic acid (ATRA) and vitamin D3 (VD). 1 Different different ADJ JJ Degree=Pos _ _ _ _ 2 types type NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 acute acute ADJ JJ Degree=Pos _ _ _ _ 5 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 6 leukemia leukemia ADP IN _ _ _ _ _ 7 blast blast ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 differentiate differentiate VERB VB VerbForm=Inf _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 vitro vitro NOUN NN Number=Sing _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 all all DET DT _ _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 21 acid acid NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 ATRA ATRA X AFX _ _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 vitamin vitamin ADJ JJ Degree=Pos _ _ _ _ 27 D3 D3 NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 VD VD NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 10138 # text = M0/M1 leukemic cells are not sensitive to differentiating agents, whereas M3 leukemic cells are induced to undergo granulocytic differentiation after ATRA treatment but are not sensitive to VD. 1 M0/M1 M0/M1 NUM CD NumType=Card _ _ _ _ 2 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 7 to to SCONJ IN _ _ _ _ _ 8 differentiating differentiat VERB VBG VerbForm=Ger _ _ _ _ 9 agents agent NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 whereas wherea NOUN NNS Number=Plur _ _ _ _ 12 M3 M3 NUM CD NumType=Card _ _ _ _ 13 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 undergo undergo VERB VB VerbForm=Inf _ _ _ _ 19 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 20 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 21 after after ADP IN _ _ _ _ _ 22 ATRA Atra PROPN NNP Number=Sing _ _ _ _ 23 treatment treatment NOUN NN Number=Sing _ _ _ _ 24 but but CCONJ CC _ _ _ _ _ 25 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 not not PART RB _ _ _ _ _ 27 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 28 to to PART TO _ _ _ _ _ 29 VD VD VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 10139 # text = M2 leukemic blast cells behave differently because they undergo monocytic differentiation with both the differentiation inducers. 1 M2 M2 X LS _ _ _ _ _ 2 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 3 blast blast ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 behave behave VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 differently differently ADV RB _ _ _ _ _ 7 because because SCONJ IN _ _ _ _ _ 8 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 9 undergo undergo VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 11 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 both both CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 16 inducers inducer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 10140 # text = To gain some insight into the maturation of M2-type leukemic cells, we studied the molecular mechanisms underlying monocytic differentiation induced by ATRA and VD in spontaneous M2 blast cells as well as in Kasumi-1 cells (an acute myeloid leukemia M2-type cell line). 1 To to PART TO _ _ _ _ _ 2 gain gain VERB VB VerbForm=Inf _ _ _ _ 3 some some DET DT _ _ _ _ _ 4 insight insight NOUN NN Number=Sing _ _ _ _ 5 into into ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 maturation maturation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 M2 m2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT : _ _ _ _ SpaceAfter=No 11 type type NOUN NN Number=Sing _ _ _ _ 12 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 16 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 19 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 20 underlying underly VERB VBG VerbForm=Ger _ _ _ _ 21 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 22 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 23 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 ATRA ATRA PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 VD V PROPN NNP Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 spontaneous spontaneous ADJ JJ Degree=Pos _ _ _ _ 30 M2 m2 NUM CD NumType=Card _ _ _ _ 31 blast blast ADJ JJ Degree=Pos _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 as as ADV RB _ _ _ _ _ 34 well well ADV RB Degree=Pos _ _ _ _ 35 as as ADP IN _ _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 Kasumi Kasumi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT , _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 acute acute ADJ JJ Degree=Pos _ _ _ _ 44 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 45 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 46 M2 m2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 type type NOUN NN Number=Sing _ _ _ _ 49 cell cell NOUN NN Number=Sing _ _ _ _ 50 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 10141 # text = Our results indicate that ATRA as well as VD efficiently increases the nuclear abundance of VD receptor (VDR) and promotes monocytic differentiation. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 ATRA ATRA PROPN NNP Number=Sing _ _ _ _ 6 as as ADV RB _ _ _ _ _ 7 well well ADV RB Degree=Pos _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 VD VD PROPN NNP Number=Sing _ _ _ _ 10 efficiently efficiently ADV RB _ _ _ _ _ 11 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 abundance abundance NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 VD V NOUN NN Number=Sing _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 VDR VDR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 promotes promote VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 24 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 10142 # text = VDR is functionally active in ATRA-treated Kasumi-1 cells because it efficiently heterodimerizes with retinoid X receptor, binds to a DR3-type vitamin D-responsive element, and activates the transcription of a vitamin D-responsive element-regulated reporter gene. 1 VDR VDR PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 functionally functionally ADV RB _ _ _ _ _ 4 active active ADJ JJ Degree=Pos _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 ATRA ATRA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 Kasumi Kasumi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 because because SCONJ IN _ _ _ _ _ 14 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 15 efficiently efficiently ADV RB _ _ _ _ _ 16 heterodimerizes heterodimerize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 retinoid retinoid NOUN NN Number=Sing _ _ _ _ 19 X x ADP IN _ _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 DR3 DR3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 type type NOUN NN Number=Sing _ _ _ _ 28 vitamin vitamin NOUN NNS Number=Plur _ _ _ _ 29 D- D- PUNCT : _ _ _ _ SpaceAfter=No 30 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 31 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 transcription transcription NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 vitamin vitamin NOUN NN Number=Sing _ _ _ _ 40 D- D- PUNCT NFP _ _ _ _ SpaceAfter=No 41 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 42 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 reporter reporter NOUN NN Number=Sing _ _ _ _ 46 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 10143 # text = Consistent with these findings, VD-responsive genes are induced by ATRA treatment of Kasumi-1 cells, suggesting that the genetic program underlying monocytic differentiation is activated. 1 Consistent consistent ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 findings finding NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 VD V PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 9 genes gene NOUN NNS Number=Plur _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 ATRA Atra PROPN NNP Number=Sing _ _ _ _ 14 treatment treatment NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 Kasumi Kasumi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 22 that that SCONJ IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 25 program program NOUN NN Number=Sing _ _ _ _ 26 underlying underly VERB VBG VerbForm=Ger _ _ _ _ 27 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 28 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 10144 # text = The molecular mechanism by which ATRA increases the nuclear abundance of a functional VDR is still unknown, but our data clearly indicate that the M2 leukemic cell context is only permissive of monocytic differentiation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 3 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 which which PRON WDT PronType=Rel _ _ _ _ 6 ATRA ATRA PROPN NNP Number=Sing _ _ _ _ 7 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 abundance abundance NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 functional functional ADJ JJ Degree=Pos _ _ _ _ 14 VDR Vdr NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 still still ADV RB _ _ _ _ _ 17 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 21 data data NOUN NN Number=Sing _ _ _ _ 22 clearly clearly ADV RB _ _ _ _ _ 23 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 M2 m2 NOUN NN Number=Sing _ _ _ _ 27 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 context context NOUN NN Number=Sing _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 only only ADV RB _ _ _ _ _ 32 permissive permissive ADJ JJ Degree=Pos _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 35 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10145 # text = Document 0030012084 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012084 0030012084 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10146 # text = Cell type specificity and activation requirements for NFAT-1 (nuclear factor of activated T-cells) transcriptional activity determined by a new method using transgenic mice to assay transcriptional activity of an individual nuclear factor. 1 Cell cell NOUN NN Number=Sing _ _ _ _ 2 type type NOUN NN Number=Sing _ _ _ _ 3 specificity specificity NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 requirements requirement NOUN NNS Number=Plur _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 new new ADJ JJ Degree=Pos _ _ _ _ 25 method method NOUN NN Number=Sing _ _ _ _ 26 using use VERB VBG VerbForm=Ger _ _ _ _ 27 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 28 mice mouse NOUN NNS Number=Plur _ _ _ _ 29 to to PART TO _ _ _ _ _ 30 assay assay VERB VB VerbForm=Inf _ _ _ _ 31 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 32 activity activity NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 individual individual ADJ JJ Degree=Pos _ _ _ _ 36 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 37 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10147 # text = Nuclear factor of activated T-cells (NFAT-1) is a transcription factor which is considered to be an important regulator in early T-cell activation. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 X LS _ _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 considered consider VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 be be AUX VB VerbForm=Inf _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 important important ADJ JJ Degree=Pos _ _ _ _ 23 regulator regulator NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 early early ADJ JJ Degree=Pos _ _ _ _ 26 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 10148 # text = We have developed a system to monitor the transcriptional activity of NFAT-1 at the single cell level in whole animals. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 developed develop VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 system system NOUN NN Number=Sing _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 monitor monitor VERB VB VerbForm=Inf _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 at at ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 single single ADJ JJ Degree=Pos _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 level level NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 whole whole ADJ JJ Degree=Pos _ _ _ _ 22 animals animal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 10149 # text = The system is based on the use of an oligomerized NFAT-1 binding motif that directs transcription of SV40 T-antigen in transgenic mice. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 system system NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 use use NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 oligomerized oligomerize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 binding binding NOUN NN Number=Sing _ _ _ _ 15 motif motif NOUN NN Number=Sing _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 directs direct VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 SV40 SV40 NUM CD NumType=Card _ _ _ _ 21 T- T- SYM SYM _ _ _ _ SpaceAfter=No 22 antigen antigen NUM CD NumType=Card _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 25 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 10150 # text = This report represents the first demonstration that a multimerized short binding motif can function appropriately in transgenic mice. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 report report NOUN NN Number=Sing _ _ _ _ 3 represents represent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 6 demonstration demonstration NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 multimerized multimerize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 short short ADJ JJ Degree=Pos _ _ _ _ 11 binding binding NOUN NN Number=Sing _ _ _ _ 12 motif motif NOUN NN Number=Sing _ _ _ _ 13 can can AUX MD VerbForm=Fin _ _ _ _ 14 function function VERB VB VerbForm=Inf _ _ _ _ 15 appropriately appropriately ADV RB _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 18 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 10151 # text = NFAT-1 activity had previously been thought to be confined to activated T-lymphocytes upon release of intracellular calcium. 1 NFAT Nfat ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 activity activity NOUN NN Number=Sing _ _ _ _ 5 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 previously previously ADV RB _ _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 confined confine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 16 upon upon ADP IN _ _ _ _ _ 17 release release NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 20 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 10152 # text = By targeting NFAT-1-dependent gene expression in transgenic mice we discovered new sites of NFAT-1 activity. 1 By by SCONJ IN _ _ _ _ _ 2 targeting target VERB VBG VerbForm=Ger _ _ _ _ 3 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 12 mice mouse NOUN NNS Number=Plur _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 discovered discover VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 new new ADJ JJ Degree=Pos _ _ _ _ 16 sites site NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10153 # text = Besides in T-lymphocytes NFAT-1 activity could also be induced in T-lymphocyte-depleted spleen cells and purified B-lymphocytes and requires agents that both release intracellular calcium and activate protein kinase C. 1 Besides besides ADP IN _ _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 5 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 could could AUX MD VerbForm=Fin _ _ _ _ 10 also also ADV RB _ _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 depleted deplet VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 spleen spleen NOUN NNS Number=Plur _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 agents agent NOUN NNS Number=Plur _ _ _ _ 28 that that PRON WDT PronType=Rel _ _ _ _ 29 both both DET DT _ _ _ _ _ 30 release release NOUN NN Number=Sing _ _ _ _ 31 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 32 calcium calcium NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 activate activate ADJ JJ Degree=Pos _ _ _ _ 35 protein protein NOUN NN Number=Sing _ _ _ _ 36 kinase kinase NOUN NN Number=Sing _ _ _ _ 37 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 10154 # text = A difference in the time course of appearance of NFAT-1 activity between T-lymphocytes and non-T-lymphocytes was revealed. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 difference difference NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 time time NOUN NN Number=Sing _ _ _ _ 6 course course NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 appearance appearance NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 between between ADP IN _ _ _ _ _ 15 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 non-T- non-t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 revealed reveal VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10155 # text = Constitutive expression was observed in a small population of cells in the dermis and some mice have developed skin lesions. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 small small ADJ JJ Degree=Pos _ _ _ _ 8 population population NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 dermis dermis NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 some some DET DT _ _ _ _ _ 16 mice mouse NOUN NNS Number=Plur _ _ _ _ 17 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 developed develop VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 skin skin ADJ JJ Degree=Pos _ _ _ _ 20 lesions lesion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 10156 # text = Interestingly, the tissue pattern of expression of the NFAT-1 activity resembles the expression pattern described for HIV-LTR/tat transgenic mice (Vogel, J., Hinrichs, S. H., Reynolds, R. K., Luciw, P. A., and Jay, G. (1988) Nature 335, 606-611). 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 tissue tissue ADJ JJ Degree=Pos _ _ _ _ 5 pattern pattern NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 NFAT Nfat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 resembles resemble NOUN NNS Number=Plur _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 pattern pattern NOUN NN Number=Sing _ _ _ _ 18 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 24 tat tat NOUN NN Number=Sing _ _ _ _ 25 transgenic transgenic NOUN NN Number=Sing _ _ _ _ 26 mice mouse NOUN NNS Number=Plur _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 Vogel Vogel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 J. J. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 Hinrichs Hinrichs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 S. S. PROPN NNP Number=Sing _ _ _ _ 35 H. H. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 Reynolds Reynolds PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 R. R. PROPN NNP Number=Sing _ _ _ _ 40 K. K. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 Luciw Luciw PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 P. P. PROPN NNP Number=Sing _ _ _ _ 45 A. A. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 and and CCONJ CC _ _ _ _ _ 48 Jay Jay PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 G. G. PROPN NNP Number=Sing _ _ _ _ 51 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 52 1988 1988 NUM CD NumType=Card _ _ _ SpaceAfter=No 53 ) ) PUNCT -RRB- _ _ _ _ _ 54 Nature nature NOUN NN Number=Sing _ _ _ _ 55 335 335 NUM CD NumType=Card _ _ _ SpaceAfter=No 56 , , PUNCT , _ _ _ _ _ 57 606-611 606-611 NUM CD NumType=Card _ _ _ SpaceAfter=No 58 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 10157 # text = This similarity in expression and the fact that NFAT-1 has been shown to bind functional sequences in HIV-LTR suggest a role for NFAT-1 in dermal activation of the HIV-LTR. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 similarity similarity NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 fact fact NOUN NN Number=Sing _ _ _ _ 8 that that ADV WRB PronType=Rel _ _ _ _ 9 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 14 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 bind bind VERB VB VerbForm=Inf _ _ _ _ 17 functional functional ADJ JJ Degree=Pos _ _ _ _ 18 sequences sequence NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 LTR LTR PROPN NNP Number=Sing _ _ _ _ 23 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 role role NOUN NN Number=Sing _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 dermal dermal ADJ JJ Degree=Pos _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10158 # text = Document 0030012086 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012086 0030012086 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10159 # text = The ubiquitous octamer-binding protein(s) is sufficient for transcription of immunoglobulin genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 3 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 binding binding VERB VBG VerbForm=Ger _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 s s X AFX _ _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 16 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10160 # text = All immunoglobulin genes contain a conserved octanucleotide promoter element, ATGCAAAT, which has been shown to be required for their normal B-cell-specific transcription. 1 All all DET DT _ _ _ _ _ 2 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 3 genes gene NOUN NNS Number=Plur _ _ _ _ 4 contain contain VERB VB VerbForm=Inf _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 octanucleotide octanucleotide NOUN NN Number=Sing _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 ATGCAAAT ATGCAAAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 16 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 22 normal normal ADJ JJ Degree=Pos _ _ _ _ 23 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 specific specific ADJ JJ Degree=Pos _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 10161 # text = Proteins that bind this octamer have been purified, and cDNAs encoding octamer-binding proteins have been cloned. 1 Proteins Protein NOUN NNS Number=Plur _ _ _ _ 2 that that PRON WDT PronType=Rel _ _ _ _ 3 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 octamer octamer NOUN NN Number=Sing _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 purified purify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 cDNAs cDNAs SCONJ IN _ _ _ _ _ 12 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 13 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 binding binding VERB VBG VerbForm=Ger _ _ _ _ 16 proteins protein NOUN NNS Number=Plur _ _ _ _ 17 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 19 cloned clon VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 10162 # text = Some of these proteins (referred to as OTF-2) are lymphoid specific, whereas at least one other, and possibly more (referred to as OTF-1), is found ubiquitously in all cell types. 1 Some some DET DT _ _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 proteins protein NOUN NNS Number=Plur _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 referred refer VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 OTF OTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 X LS _ _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 lymphoid lymphoid VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 whereas whereas ADV RB _ _ _ _ _ 18 at at ADV RB _ _ _ _ _ 19 least least ADV RBS Degree=Sup _ _ _ _ 20 one one NUM CD NumType=Card _ _ _ _ 21 other other ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 possibly possibly ADV RB _ _ _ _ _ 25 more more ADV RBR _ _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 referred refer VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 as as ADP IN _ _ _ _ _ 30 OTF OTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 ubiquitously ubiquitously ADV RB _ _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 all all DET DT _ _ _ _ _ 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 10163 # text = The exact role of these different proteins in directing the tissue-specific expression of immunoglobulin genes is unclear. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 exact exact ADJ JJ Degree=Pos _ _ _ _ 3 role role NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 different different ADJ JJ Degree=Pos _ _ _ _ 7 proteins protein NOUN NNS Number=Plur _ _ _ _ 8 in in SCONJ IN _ _ _ _ _ 9 directing direct VERB VBG VerbForm=Ger _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 unclear unclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 10164 # text = We have identified two human pre-B-cell lines that contain extremely low levels of OTF-2 yet still express high levels of steady-state immunoglobulin heavy-chain mRNA in vivo and efficiently transcribe an immunoglobulin gene in vitro. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 pre-B pre-b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 lines line NOUN NNS Number=Plur _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 extremely extremely ADV RB _ _ _ _ _ 13 low low ADJ JJ Degree=Pos _ _ _ _ 14 levels level NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 OTF OTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 yet yet CCONJ CC _ _ _ _ _ 20 still still ADV RB _ _ _ _ _ 21 express express ADJ JJ Degree=Pos _ _ _ _ 22 high high ADJ JJ Degree=Pos _ _ _ _ 23 levels level NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 steady steady ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 state state NOUN NN Number=Sing _ _ _ _ 28 immunoglobulin immunoglobulin ADP IN _ _ _ _ _ 29 heavy heavy ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 30 -chain -chain ADJ JJ Degree=Pos _ _ _ _ 31 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 vivo vivo NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 efficiently efficiently ADV RB _ _ _ _ _ 36 transcribe transcribe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 37 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 39 gene gene NOUN NN Number=Sing _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 10165 # text = Addition of a highly enriched preparation of OTF-1 made from one of these pre-B cells or from HeLa cells specifically stimulated in vitro transcription of an immunoglobulin gene. 1 Addition Addition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 highly highly ADV RB _ _ _ _ _ 5 enriched enriched ADJ JJ Degree=Pos _ _ _ _ 6 preparation preparation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 OTF OTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 made make VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 one one NUM CD NumType=Card _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 16 pre pre X AFX _ _ _ _ SpaceAfter=No 17 -B -b ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 specifically specifically ADV RB _ _ _ _ _ 24 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 vitro vitro NOUN NN Number=Sing _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 10166 # text = Furthermore, OFT-1 appeared to have approximately the same transactivation ability as OTF-2 when normalized for binding activity. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 OFT OFT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 have have VERB VB VerbForm=Inf _ _ _ _ 9 approximately approximately ADV RB _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 same same ADJ JJ Degree=Pos _ _ _ _ 12 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 13 ability ability NOUN NN Number=Sing _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 OTF OTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 when when ADV WRB PronType=Int _ _ _ _ 19 normalized normalized VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 for for SCONJ IN _ _ _ _ _ 21 binding bind VERB VBG VerbForm=Ger _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 10167 # text = These results suggest that OTF-1, without OTF-2, is sufficient for transcription of immunoglobulin genes and that OTF-2 alone is not responsible for the B-cell-specific regulation of immunoglobulin gene expression. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 OTF OTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 without without ADP IN _ _ _ _ _ 10 OTF OTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 that that SCONJ IN _ _ _ _ _ 23 OTF Otf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - SYM SYM _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ _ 26 alone alone ADV RB _ _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 not not PART RB _ _ _ _ _ 29 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 specific specific ADJ JJ Degree=Pos _ _ _ _ 36 regulation regulation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 39 gene gene NOUN NN Number=Sing _ _ _ _ 40 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10168 # text = Document 0030012093 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012093 0030012093 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10169 # text = alpha-Tocopheryl succinate inhibits monocytic cell adhesion to endothelial cells by suppressing NF-kappa B mobilization. 1 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 Tocopheryl Tocopheryl PROPN NNP Number=Sing _ _ _ _ 4 succinate succinate ADJ JJ Degree=Pos _ _ _ _ 5 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 6 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 by by SCONJ IN _ _ _ _ _ 13 suppressing suppresse VERB VBG VerbForm=Ger _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 mobilization mobilization NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10170 # text = The adherence of monocytes to activated endothelium is an early event in atherogenesis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 adherence adherence NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 endothelium endothelium NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 early early ADJ JJ Degree=Pos _ _ _ _ 11 event event NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 atherogenesis atherogenesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 10171 # text = Because antioxidants have been considered to be of antiatherosclerotic potential, we investigated the effects of alpha-tocopherol (TCP) and its acetate and succinate esters on monocyte adhesion to cytokine-stimulated human umbilical vein endothelial cells (HUVEC). 1 Because because SCONJ IN _ _ _ _ _ 2 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 considered consider VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 antiatherosclerotic antiatherosclerotic ADJ JJ Degree=Pos _ _ _ _ 10 potential potential NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 13 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 effects effect NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 tocopherol tocopherol NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 TCP TCP NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 25 acetate acetate NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 succinate succinate ADJ JJ Degree=Pos _ _ _ _ 28 esters ester NOUN NNS Number=Plur _ _ _ _ 29 on on ADP IN _ _ _ _ _ 30 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 31 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 32 to to PART TO _ _ _ _ _ 33 cytokine cytokine VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 human human ADJ JJ Degree=Pos _ _ _ _ 37 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 38 vein vein NOUN NN Number=Sing _ _ _ _ 39 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 HUVEC HUVEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 10172 # text = Endothelial cells were treated with TCP, alpha-tocopherol acetate (TCP acetate), or alpha-tocopheryl succinate (TCP succinate) before stimulation with tumor necrosis factor-alpha (TNF-alpha; 10 U/ml, 6 h) or interleukin-1 beta (IL-1 beta; 10 U/ml, 6 h). 1 Endothelial Endothelial ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 treated treat VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 TCP Tcp NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 tocopherol tocopherol NOUN NN Number=Sing _ _ _ _ 11 acetate acetate NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 TCP TCP NOUN NN Number=Sing _ _ _ _ 14 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 tocopheryl tocopheryl NOUN NN Number=Sing _ _ _ _ 21 succinate succinate NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 TCP Tcp NOUN NN Number=Sing _ _ _ _ 24 succinate succinate NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 before before ADP IN _ _ _ _ _ 27 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 tumor tumor NOUN NN Number=Sing _ _ _ _ 30 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 31 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 alpha alpha NOUN NN Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ; ; PUNCT , _ _ _ _ _ 39 10 10 NUM CD NumType=Card _ _ _ _ 40 U/ml u/ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 6 6 NUM CD NumType=Card _ _ _ _ 43 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ _ 45 or or CCONJ CC _ _ _ _ _ 46 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 1 1 NUM CD NumType=Card _ _ _ _ 49 beta beta NOUN NN Number=Sing _ _ _ _ 50 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 51 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 1 1 NUM CD NumType=Card _ _ _ _ 54 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 ; ; PUNCT , _ _ _ _ _ 56 10 10 NUM CD NumType=Card _ _ _ _ 57 U/ml u/ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 , , PUNCT , _ _ _ _ _ 59 6 6 NUM CD NumType=Card _ _ _ _ 60 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 61 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 62 . . PUNCT . _ _ _ _ _ # sent_id = 10173 # text = Cytokine-stimulated cell surface expression of vascular cell adhesion molecule-1 (VCAM-1, CD106) and E-selectin (ELAM-1, CD62E), but not of intercellular adhesion molecule-1 (ICAM-1, CD54), was time- and dose-dependently inhibited by TCP succinate but not by TCP or TCP acetate. 1 Cytokine Cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 surface surface NOUN NN Number=Sing _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 11 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 CD106 CD106 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 E-selectin E-selectin PROPN NNP Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 ELAM ELAm PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 CD62E CD62E PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 but but CCONJ CC _ _ _ _ _ 32 not not ADV RB _ _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 intercellular intercellular ADJ JJ Degree=Pos _ _ _ _ 35 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 36 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 1 1 NUM CD NumType=Card _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 CD54 CD54 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 48 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT , _ _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT , _ _ _ _ SpaceAfter=No 53 dependently dependently ADV RB _ _ _ _ _ 54 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 55 by by ADP IN _ _ _ _ _ 56 TCP TCP NOUN NN Number=Sing _ _ _ _ 57 succinate succinate NOUN NN Number=Sing _ _ _ _ 58 but but CCONJ CC _ _ _ _ _ 59 not not ADV RB _ _ _ _ _ 60 by by ADP IN _ _ _ _ _ 61 TCP TCP NOUN NN Number=Sing _ _ _ _ 62 or or CCONJ CC _ _ _ _ _ 63 TCP TCP NOUN NN Number=Sing _ _ _ _ 64 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 65 . . PUNCT . _ _ _ _ _ # sent_id = 10174 # text = TCP succinate (200 microM, 24 h) reduced TNF-induced VCAM-1 and E-selectin expression from a specific mean fluorescence intensity of 151 +/- 28 to 12 +/- 4 channels and from 225 +/- 38 to 79 +/- 21 channels, respectively. 1 TCP TCp SYM NFP _ _ _ _ _ 2 succinate succinate NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 200 200 NUM CD NumType=Card _ _ _ _ 5 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 24 24 NUM CD NumType=Card _ _ _ _ 8 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 E- E- SYM SYM _ _ _ _ SpaceAfter=No 19 selectin selectin ADJ JJ Degree=Pos _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 specific specific ADJ JJ Degree=Pos _ _ _ _ 24 mean mean NOUN NN Number=Sing _ _ _ _ 25 fluorescence fluorescence NOUN NN Number=Sing _ _ _ _ 26 intensity intensity NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 151 151 NUM CD NumType=Card _ _ _ _ 29 +/- +/- SYM SYM _ _ _ _ _ 30 28 28 NUM CD NumType=Card _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 12 12 NUM CD NumType=Card _ _ _ _ 33 +/- +/- SYM SYM _ _ _ _ _ 34 4 4 NUM CD NumType=Card _ _ _ _ 35 channels channel NOUN NNS Number=Plur _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 from from ADP IN _ _ _ _ _ 38 225 225 NUM CD NumType=Card _ _ _ _ 39 +/- +/- SYM SYM _ _ _ _ _ 40 38 38 NUM CD NumType=Card _ _ _ _ 41 to to ADP IN _ _ _ _ _ 42 79 79 NUM CD NumType=Card _ _ _ _ 43 +/- +/- SYM SYM _ _ _ _ _ 44 21 21 NUM CD NumType=Card _ _ _ _ 45 channels channel NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 10175 # text = Succinate alone had no effect. 1 Succinate Succinate PROPN NNP Number=Sing _ _ _ _ 2 alone alone ADV RB _ _ _ _ _ 3 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 no no DET DT _ _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 . . PUNCT . _ _ _ _ _ # sent_id = 10176 # text = Decreased adhesion molecule expression was associated with a reduction of monocytic cell adhesion. 1 Decreased Decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 3 molecule molecule NOUN NN Number=Sing _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 reduction reduction NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 10177 # text = TCP succinate (20 microM, 72 h), but not TCP (200 microM, 72 h), reduced U-937 cell adhesion to TNF-alpha-stimulated (10 U/ml, 6 h) HUVEC by 30% (P < 0.025) and to IL-1 beta-stimulated HUVEC by 56% (P < 0.010). 1 TCP TCp SYM NFP _ _ _ _ _ 2 succinate succinate NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 20 20 NUM CD NumType=Card _ _ _ _ 5 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 72 72 NUM CD NumType=Card _ _ _ _ 8 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 not not ADV RB _ _ _ _ _ 13 TCP Tcp NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 200 200 NUM CD NumType=Card _ _ _ _ 16 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 72 72 NUM CD NumType=Card _ _ _ _ 19 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 937 937 NUM CD NumType=Card _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 10 10 NUM CD NumType=Card _ _ _ _ 36 U/ U/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 ml ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 6 6 NUM CD NumType=Card _ _ _ _ 40 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 HUVEC HUVEC NOUN NN Number=Sing _ _ _ _ 43 by by ADP IN _ _ _ _ _ 44 30 30 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 % % SYM NN Number=Sing _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 P p NOUN NN Number=Sing _ _ _ _ 48 < < PUNCT -LRB- _ _ _ _ _ 49 0.025 0.025 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 to to ADP IN _ _ _ _ _ 53 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 1 1 NUM CD NumType=Card _ _ _ _ 56 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 59 HUVEC Huvec PROPN NNP Number=Sing _ _ _ _ 60 by by ADP IN _ _ _ _ _ 61 56 56 NUM CD NumType=Card _ _ _ SpaceAfter=No 62 % % SYM NN Number=Sing _ _ _ _ 63 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 64 P p NOUN NN Number=Sing _ _ _ _ 65 < < PUNCT -LRB- _ _ _ _ _ 66 0.010 0.010 NUM CD NumType=Card _ _ _ SpaceAfter=No 67 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 68 . . PUNCT . _ _ _ _ _ # sent_id = 10178 # text = Electrophoretic mobility-shift assays of HUVEC nuclear proteins revealed a decrease in TNF-alpha-stimulated nuclear factor-kappa B (NF-kappa B) activation after pretreatment of HUVEC with TCP succinate but not with TCP, TCP acetate, or succinate alone. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assays assay NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 HUVEC Huvec ADJ JJ Degree=Pos _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 decrease decrease NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappa kappa NOUN NN Number=Sing _ _ _ _ 23 B b NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ _ 31 after after ADP IN _ _ _ _ _ 32 pretreatment pretreatment NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 HUVEC HUVEC PROPN NNP Number=Sing _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 TCP TCP NOUN NN Number=Sing _ _ _ _ 37 succinate succinate NOUN NN Number=Sing _ _ _ _ 38 but but CCONJ CC _ _ _ _ _ 39 not not ADV RB _ _ _ _ _ 40 with with ADP IN _ _ _ _ _ 41 TCP TCP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 TCP TCP PROPN NNP Number=Sing _ _ _ _ 44 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 or or CCONJ CC _ _ _ _ _ 47 succinate succinate VERB VB VerbForm=Inf _ _ _ _ 48 alone alone ADV RB _ _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 10179 # text = In conclusion, we demonstrate that the vitamin E derivative TCP succinate prevents monocytic cell adhesion to cytokine-stimulated endothelial cells by inhibiting the activation of NF-kappa B, further emphasizing the antiatherosclerotic potential of lipid soluble antioxidants. 1 In in ADP IN _ _ _ _ _ 2 conclusion conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 vitamin vitamin NOUN NN Number=Sing _ _ _ _ 9 E e NOUN NN Number=Sing _ _ _ _ 10 derivative derivative NOUN NN Number=Sing _ _ _ _ 11 TCP Tcp NOUN NN Number=Sing _ _ _ _ 12 succinate succinate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 prevents prevent NOUN NNS Number=Plur _ _ _ _ 14 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 cytokine cytokine VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 by by SCONJ IN _ _ _ _ _ 24 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappa kappa PROPN NNP Number=Sing _ _ _ _ 31 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 further further SCONJ IN _ _ _ _ _ 34 emphasizing emphasize VERB VBG VerbForm=Ger _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 antiatherosclerotic antiatherosclerotic ADJ JJ Degree=Pos _ _ _ _ 37 potential potential NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 lipid lipid ADJ JJ Degree=Pos _ _ _ _ 40 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 41 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10180 # text = Document 0030012098 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012098 0030012098 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10181 # text = Lineage- and stage-specific expression of runt box polypeptides in primitive and definitive hematopoiesis. 1 Lineage Lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 stage stage NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 specific specific ADJ JJ Degree=Pos _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 runt runt NOUN NN Number=Sing _ _ _ _ 10 box box NOUN NN Number=Sing _ _ _ _ 11 polypeptides polypeptide NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 primitive primitive ADJ JJ Degree=Pos _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 definitive definitive ADJ JJ Degree=Pos _ _ _ _ 16 hematopoiesis hematopoiesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10182 # text = Translocations involving the human CBFA2 locus have been associated with leukemia. 1 Translocations Translocation NOUN NNS Number=Plur _ _ _ _ 2 involving involve VERB VBG VerbForm=Ger _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 CBFA2 Cbfa2 NOUN NN Number=Sing _ _ _ _ 6 locus locus NOUN NN Number=Sing _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 9 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 10183 # text = This gene, originally named AML1, is a human homologue of the Drosophila gene runt that controls early events in fly embryogenesis. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 originally originally ADV RB _ _ _ _ _ 5 named name VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 AML1 Aml1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 homologue homologue NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 Drosophila Drosophila PROPN NNP Number=Sing _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 runt runt NOUN NN Number=Sing _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 controls control VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 early early ADJ JJ Degree=Pos _ _ _ _ 20 events event NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 fly fly ADJ JJ Degree=Pos _ _ _ _ 23 embryogenesis embryogenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 10184 # text = To clarify the role of mammalian runt products in normal and leukemic hematopoiesis, we have studied their pattern of expression in mouse hematopoietic tissues in the adult and during ontogeny using an anti-runt box antiserum. 1 To to PART TO _ _ _ _ _ 2 clarify clarify VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 7 runt runt NOUN NN Number=Sing _ _ _ _ 8 products product NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 normal normal ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 13 hematopoiesis hematopoiesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 16 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 studied studie VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 pattern pattern NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 mouse mouse NOUN NN Number=Sing _ _ _ _ 24 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 25 tissues tissue NOUN NNS Number=Plur _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 adult adult NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 during during ADP IN _ _ _ _ _ 31 ontogeny ontogeny NOUN NN Number=Sing _ _ _ _ 32 using use VERB VBG VerbForm=Ger _ _ _ _ 33 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 anti-runt anti-runt ADJ JJ Degree=Pos _ _ _ _ 35 box box NOUN NN Number=Sing _ _ _ _ 36 antiserum antiserum NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 10185 # text = In the adult bone marrow, we found expression of runt polypeptides in differentiating myeloid cells and in B lymphocytes. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 adult adult NOUN NN Number=Sing _ _ _ _ 4 bone bone NOUN NN Number=Sing _ _ _ _ 5 marrow marrow NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 8 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 runt runt ADJ JJ Degree=Pos _ _ _ _ 12 polypeptides polypeptide NOUN NNS Number=Plur _ _ _ _ 13 in in SCONJ IN _ _ _ _ _ 14 differentiating differentiat VERB VBG VerbForm=Ger _ _ _ _ 15 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 B b ADJ JJ Degree=Pos _ _ _ _ 20 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 10186 # text = Within the erythroid lineage, runt expression is biphasic, clearly present in the erythroblasts of early blood islands and of the fetal liver, but absent in the adult. 1 Within within ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 4 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 runt runt NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 biphasic biphasic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 clearly clearly ADV RB _ _ _ _ _ 12 present present ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 erythroblasts erythroblast NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 early early ADJ JJ Degree=Pos _ _ _ _ 18 blood blood NOUN NN Number=Sing _ _ _ _ 19 islands island NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 24 liver liver NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 but but CCONJ CC _ _ _ _ _ 27 absent absent VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 adult adult NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 10187 # text = Biochemical analysis by Western blotting of fetal and adult hematopoietic populations shows several runt isoforms. 1 Biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 Western western ADJ JJ Degree=Pos _ _ _ _ 5 blotting blotting NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 adult adult ADJ JJ Degree=Pos _ _ _ _ 10 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 11 populations population NOUN NNS Number=Plur _ _ _ _ 12 shows show VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 several several ADJ JJ Degree=Pos _ _ _ _ 14 runt runt NOUN NN Number=Sing _ _ _ _ 15 isoforms isoform NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 10188 # text = At least one of them appears to be myeloid specific. 1 At at ADV RB _ _ _ _ _ 2 least least ADV RBS Degree=Sup _ _ _ _ 3 one one NUM CD NumType=Card _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ _ 6 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 myeloid myeloid VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10189 # text = Document 0030012099 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012099 0030012099 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10190 # text = Some antioxidants inhibit, in a co-ordinate fashion, the production of tumor necrosis factor-alpha, IL-beta, and IL-6 by human peripheral blood mononuclear cells. 1 Some some DET DT _ _ _ _ _ 2 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ _ 3 inhibit inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 co-ordinate co-ordinate ADJ JJ Degree=Pos _ _ _ _ 8 fashion fashion NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 production production NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 tumor tumor NOUN NN Number=Sing _ _ _ _ 14 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 6 6 NUM CD NumType=Card _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 30 blood blood NOUN NN Number=Sing _ _ _ _ 31 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10191 # text = Some antioxidants, including butylated hydroxyanisole (BHA), tetrahydropapaveroline (THP), nordihydroguiauretic acid, and 10,11-dihydroxyaporphine (DHA), were found to be potent inhibitors of the production of tumor necrosis factor (TNF)-alpha, IL-1 beta, and IL-6 by human peripheral blood mononuclear cells (PBMC) stimulated by lipopolysaccharide (LPS) (IC50s in the low micromolar range). 1 Some some DET DT _ _ _ _ _ 2 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 including include VERB VBG VerbForm=Ger _ _ _ _ 5 butylated butylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 hydroxyanisole hydroxyanisole NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 BHA BHA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 tetrahydropapaveroline tetrahydropapaveroline NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 nordihydroguiauretic nordihydroguiauretic ADJ JJ Degree=Pos _ _ _ _ 17 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 10,11 10,11 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 dihydroxyaporphine dihydroxyaporphine NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 DHA DHA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 to to PART TO _ _ _ _ _ 30 be be AUX VB VerbForm=Inf _ _ _ _ 31 potent potent ADJ JJ Degree=Pos _ _ _ _ 32 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 production production NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 tumor tumor NOUN NN Number=Sing _ _ _ _ 38 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 39 factor factor NOUN NN Number=Sing _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 43 - - PUNCT , _ _ _ _ SpaceAfter=No 44 alpha alpha INTJ UH _ _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT , _ _ _ _ SpaceAfter=No 48 1 1 NUM CD NumType=Card _ _ _ _ 49 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 , , PUNCT , _ _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT , _ _ _ _ SpaceAfter=No 54 6 6 NUM CD NumType=Card _ _ _ _ 55 by by ADP IN _ _ _ _ _ 56 human human ADJ JJ Degree=Pos _ _ _ _ 57 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 58 blood blood NOUN NN Number=Sing _ _ _ _ 59 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 60 cells cell NOUN NNS Number=Plur _ _ _ _ 61 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 62 PBMC PBMC X LS _ _ _ _ SpaceAfter=No 63 ) ) PUNCT -RRB- _ _ _ _ _ 64 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 65 by by ADP IN _ _ _ _ _ 66 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 67 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 68 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 69 ) ) PUNCT -RRB- _ _ _ _ _ 70 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 71 IC50s IC50 NOUN NNS Number=Plur _ _ _ _ 72 in in ADP IN _ _ _ _ _ 73 the the DET DT Definite=Def|PronType=Art _ _ _ _ 74 low low ADJ JJ Degree=Pos _ _ _ _ 75 micromolar micromolar ADJ JJ Degree=Pos _ _ _ _ 76 range range NOUN NN Number=Sing _ _ _ SpaceAfter=No 77 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 78 . . PUNCT . _ _ _ _ _ # sent_id = 10192 # text = Inhibition of cytokine production was gene selective and not due to general effects on protein synthesis. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 4 production production NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 gene gene VERB VB VerbForm=Inf _ _ _ _ 7 selective selective ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 not not ADV RB _ _ _ _ _ 10 due due ADP IN _ _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 general general ADJ JJ Degree=Pos _ _ _ _ 13 effects effect NOUN NNS Number=Plur _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 10193 # text = Inhibition of cytokine production by PBMC was observed also when other inducers were used (staphylococci, silica, zymosan). 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 4 production production NOUN NN Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 PBMC PBMC PROPN NNP Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 also also ADV RB _ _ _ _ _ 10 when when ADV WRB PronType=Int _ _ _ _ 11 other other ADJ JJ Degree=Pos _ _ _ _ 12 inducers inducer NOUN NNS Number=Plur _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 staphylococci staphylococci NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 silica silica NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 zymosan zymosan NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10194 # text = Much higher concentrations of other antioxidants--including ascorbic acid, trolox, alpha-tocopherol, butylated hydroxytoluene, and the 5-lipoxygenase inhibitor zileuton--did not affect the production of these cytokines. 1 Much much ADJ JJ Degree=Pos _ _ _ _ 2 higher higher ADJ JJR Degree=Cmp _ _ _ _ 3 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 other other ADJ JJ Degree=Pos _ _ _ _ 6 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 -- -- PUNCT , _ _ _ _ SpaceAfter=No 8 including include VERB VBG VerbForm=Ger _ _ _ _ 9 ascorbic ascorbic ADJ JJ Degree=Pos _ _ _ _ 10 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 trolox trolox NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 tocopherol tocopherol NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 butylated butylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 hydroxytoluene hydroxytoluene NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 lipoxygenase lipoxygenase NOUN NN Number=Sing _ _ _ _ 26 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 27 zileuton zileuton PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 -- -- PUNCT , _ _ _ _ SpaceAfter=No 29 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 not not PART RB _ _ _ _ _ 31 affect affect VERB VB VerbForm=Inf _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 production production NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 36 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 10195 # text = The active compounds did not inhibit IL-1-induced production of IL-6 in fibroblasts, showing the cell selectivity of the effect. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 active active ADJ JJ Degree=Pos _ _ _ _ 3 compounds compound NOUN NNS Number=Plur _ _ _ _ 4 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 7 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 production production NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 6 6 NUM CD NumType=Card _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 showing show VERB VBG VerbForm=Ger _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 selectivity selectivity NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 10196 # text = Antioxidant-mediated inhibition of cytokine production was correlated with low levels of the corresponding messenger RNAs. 1 Antioxidant Antioxidant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 mediated mediated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 7 production production NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 correlated correlate ADJ JJ Degree=Pos _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 low low ADJ JJ Degree=Pos _ _ _ _ 12 levels level NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 corresponding correspond NOUN NN Number=Sing _ _ _ _ 16 messenger messenger NOUN NN Number=Sing _ _ _ _ 17 RNAs RNA NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 10197 # text = Nuclear run-on experiments showed that THP inhibited transcription of the IL-1 beta gene. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 run run VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 on on ADP IN _ _ _ _ _ 5 experiments experiment NOUN NNS Number=Plur _ _ _ _ 6 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 THP THP PROPN NNP Number=Sing _ _ _ _ 9 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 beta beta NOUN NN Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 10198 # text = THP decreased the concentration of the transcription factors NF-kappa B and AP-1 detected in nuclear extracts of PBMC cultured in the presence or absence of LPS. 1 THP THp SYM NFP _ _ _ _ _ 2 decreased decrease VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 concentration concentration NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 detected detect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 extracts extract NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 PBMC PBMC PROPN NNP Number=Sing _ _ _ _ 23 cultured culture VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 presence presence NOUN NN Number=Sing _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 absence absence NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 LPS Lp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 10199 # text = THP and DHA markedly decreased the levels of TNF-alpha and IL-1 beta in the circulation of mice following LPS injection. 1 THP THP SYM NFP _ _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 DHA DHA PROPN NNP Number=Sing _ _ _ _ 4 markedly markedly ADV RB _ _ _ _ _ 5 decreased decrease VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 levels level NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 alpha alpha PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 beta beta NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 circulation circulation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 mice mouse NOUN NNS Number=Plur _ _ _ _ 22 following follow VERB VBG VerbForm=Ger _ _ _ _ 23 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 24 injection injection NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 10200 # text = Thus antioxidants vary widely in potency as inhibitors of the activation of transcription factors and of the transcription of genes for pro-inflammatory cytokines. 1 Thus thus ADV RB _ _ _ _ _ 2 antioxidants antioxidant VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 vary vary ADJ JJ Degree=Pos _ _ _ _ 4 widely widely ADV RB _ _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 potency potency NOUN NN Number=Sing _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factors factor NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 pro-inflammatory pro-inflammatory ADJ JJ Degree=Pos _ _ _ _ 23 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 10201 # text = Coordinate inhibition of the transcription of genes for inflammatory cytokines could provide a strategy for therapy of diseases with inflammatory pathogenesis and for septic shock. 1 Coordinate coordinate ADJ JJ Degree=Pos _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 genes gene NOUN NNS Number=Plur _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 10 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 11 could could AUX MD VerbForm=Fin _ _ _ _ 12 provide provide VERB VB VerbForm=Inf _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 strategy strategy NOUN NN Number=Sing _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 therapy therapy NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 diseases disease NOUN NNS Number=Plur _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 21 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 septic septic ADJ JJ Degree=Pos _ _ _ _ 25 shock shock NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10202 # text = Document 0030012103 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012103 0030012103 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10203 # text = Activation of nuclear factor-kappaB by lipopolysaccharide in mononuclear leukocytes is prevented by inhibitors of cytosolic phospholipase A2. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 11 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 prevented prevent VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 18 phospholipase phospholipase NOUN NN Number=Sing _ _ _ _ 19 A2 a2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10204 # text = In monocytes, lipopolysaccharide induces synthesis and activity of the 85-kDa cytosolic phospholipase A2. 1 In in ADP IN _ _ _ _ _ 2 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 lipopolysaccharide lipopolysaccharide VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 5 induces induce NOUN NNS Number=Plur _ _ _ _ 6 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 85 85 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kDa kDa NOUN NN Number=Sing _ _ _ _ 14 cytosolic cytosolic NOUN NN Number=Sing _ _ _ _ 15 phospholipase phospholipase NOUN NN Number=Sing _ _ _ _ 16 A2 A2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 10205 # text = This enzyme releases arachidonic acid and lyso-phospholipids from membranes which are metabolized to eicosanoids and platelet-activating-factor. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 enzyme enzyme NOUN NN Number=Sing _ _ _ _ 3 releases release VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 arachidonic arachidonic ADJ JJ Degree=Pos _ _ _ _ 5 acid acid NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 lyso lyso NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 -phospholipids -phospholipid NOUN NNS Number=Plur _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 membranes membrane NOUN NNS Number=Plur _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 metabolized metabolize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 eicosanoids eicosanoid NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 -activating -activat VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 19 -factor -factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 10206 # text = These lipid mediators increase activity of transcription factors and expression of cytokine genes indicating a function for cytosolic phospholipase A2 in signal transduction and inflammation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 lipid lipid ADJ JJ Degree=Pos _ _ _ _ 3 mediators mediator NOUN NNS Number=Plur _ _ _ _ 4 increase increase NOUN NN Number=Sing _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 function function NOUN NN Number=Sing _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 19 phospholipase phospholipase NOUN NN Number=Sing _ _ _ _ 20 A2 a2 NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 signal signal NOUN NN Number=Sing _ _ _ _ 23 transduction transduction NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 10207 # text = We have shown previously that trifluoromethylketone inhibitors of cytosolic phospholipase 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 previously previously ADV RB _ _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 trifluoromethylketone trifluoromethylketone ADJ JJ Degree=Pos _ _ _ _ 7 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 10 phospholipase phospholipase NOUN NN Number=Sing _ _ _ _ # sent_id = 10208 # text = A2 suppressed interleukin-1beta protein and steady-state mRNA levels in human lipopolysaccharide-stimulated peripheral blood mononuclear leukocytes. 1 A2 A2 PART TO Abbr=Yes _ _ _ _ 2 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 beta beta NOUN NN Number=Sing _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 steady steady ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 state state NOUN NN Number=Sing _ _ _ _ 11 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 12 levels level NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 19 blood blood NOUN NN Number=Sing _ _ _ _ 20 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 21 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10209 # text = In this study, the subcellular mechanisms were analyzed by which trifluoromethylketones interfere with gene expression. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 subcellular subcellular ADJ JJ Degree=Pos _ _ _ _ 7 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 which which PRON WDT PronType=Int _ _ _ _ 12 trifluoromethylketones trifluoromethylketones NOUN NNS Number=Plur _ _ _ _ 13 interfere interfere VERB VB VerbForm=Inf _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 10210 # text = We found that they reduced the initial interleukin-1beta mRNA transcription rate through prevention of degradation of inhibitor-kappaB alpha. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 5 reduced reduce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 initial initial ADJ JJ Degree=Pos _ _ _ _ 8 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 beta beta NOUN NN Number=Sing _ _ _ _ 11 mRNA mRNa SYM SYM _ _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 rate rate NOUN NN Number=Sing _ _ _ _ 14 through through ADP IN _ _ _ _ _ 15 prevention prevention NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 degradation degradation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappaB kappab NOUN NN Number=Sing _ _ _ _ 22 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 10211 # text = Consequently, cytosolic activation, nuclear translocation and DNA-binding of nuclear factor-kappaB were decreased. 1 Consequently consequently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 translocation translocation NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappab NOUN NN Number=Sing _ _ _ _ 17 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 10212 # text = Trifluoromethylketones ameliorate chronic inflammation in vivo. 1 Trifluoromethylketones Trifluoromethylketone NOUN NNS Number=Plur _ _ _ _ 2 ameliorate ameliorate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 4 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ _ # sent_id = 10213 # text = Thus, this therapeutic potency may reside in retention of inactive nuclear factor-kappaB in the cytosol thereby abrogating interleukin-1beta gene transcription. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 5 potency potency NOUN NN Number=Sing _ _ _ _ 6 may may AUX MD VerbForm=Fin _ _ _ _ 7 reside reside VERB VB VerbForm=Inf _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 retention retention NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappab NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 19 thereby thereby ADV RB _ _ _ _ _ 20 abrogating abrogat VERB VBG VerbForm=Ger _ _ _ _ 21 interleukin interleukin ADV RB _ _ _ _ SpaceAfter=No 22 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 beta beta NOUN NN Number=Sing _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10214 # text = Document 0030012104 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012104 0030012104 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10215 # text = C/EBP activators are required for HIV-1 replication and proviral induction in monocytic cell lines. 1 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 / / PUNCT , _ _ _ _ SpaceAfter=No 3 EBP Ebp PROPN NNP Number=Sing _ _ _ _ 4 activators activator NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 replication replication NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 proviral proviral ADJ JJ Degree=Pos _ _ _ _ 14 induction induction NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10216 # text = Previous work has shown that C/EBP sites and C/EBP transcriptional activators are necessary for HIV-1 LTR activity in monocytes/macrophages. 1 Previous previous ADJ JJ Degree=Pos _ _ _ _ 2 work work NOUN NN Number=Sing _ _ _ _ 3 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 8 EBP EBP PROPN NNP Number=Sing _ _ _ _ 9 sites site NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 EBP EBP PROPN NNP Number=Sing _ _ _ _ 14 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 15 activators activator NOUN NNS Number=Plur _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 LTR Ltr NOUN NN Number=Sing _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 / / PUNCT , _ _ _ _ SpaceAfter=No 27 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 10217 # text = We have investigated the role that C/EBP proteins play in induction and replication of HIV-1. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 EBP EBP PROPN NNP Number=Sing _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ _ 11 play play VERB VB VerbForm=Inf _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 induction induction NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 replication replication NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 10218 # text = Ectopic expression of the dominant negative C/EBP protein LIP inhibited HIV-1 mRNA and virus production in activated U1 cells, demonstrating that C/EBP proteins are required for provirus induction. 1 Ectopic Ectopic ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 6 negative negative ADJ JJ Degree=Pos _ _ _ _ 7 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 EBP EBP PROPN NNP Number=Sing _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 LIP lip NOUN NN Number=Sing _ _ _ _ 12 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 virus virus NOUN NN Number=Sing _ _ _ _ 19 production production NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 U1 U1 NUM CD NumType=Card _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 demonstrating demonstrat VERB VBG VerbForm=Ger _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 29 EBP Ebp PROPN NNP Number=Sing _ _ _ _ 30 proteins protein NOUN NNS Number=Plur _ _ _ _ 31 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 32 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 for for ADP IN _ _ _ _ _ 34 provirus provirus ADJ JJ Degree=Pos _ _ _ _ 35 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 10219 # text = U1 lines overexpressing C/EBP activator NF-IL-6 produced more viral mRNA and virus particles following cellular activation than control lines, demonstrating that C/EBP proteins are limiting for virus transcription. 1 U1 U1 NUM CD NumType=Card _ _ _ _ 2 lines line NOUN NNS Number=Plur _ _ _ _ 3 overexpressing overexpresse VERB VBG VerbForm=Ger _ _ _ _ 4 C/ C/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 5 EBP EBP PROPN NNP Number=Sing _ _ _ _ 6 activator activator ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 6 6 NUM CD NumType=Card _ _ _ _ 12 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 more more ADJ JJR Degree=Cmp _ _ _ _ 14 viral viral ADJ JJ Degree=Pos _ _ _ _ 15 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 virus virus NOUN NN Number=Sing _ _ _ _ 18 particles particle NOUN NNS Number=Plur _ _ _ _ 19 following follow VERB VBG VerbForm=Ger _ _ _ _ 20 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 than than ADP IN _ _ _ _ _ 23 control control NOUN NN Number=Sing _ _ _ _ 24 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 demonstrating demonstrate VERB VBG VerbForm=Ger _ _ _ _ 27 that that SCONJ IN _ _ _ _ _ 28 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 30 EBP Ebp PROPN NNP Number=Sing _ _ _ _ 31 proteins protein NOUN NNS Number=Plur _ _ _ _ 32 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 limiting limit VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 34 for for ADP IN _ _ _ _ _ 35 virus virus NOUN NN Number=Sing _ _ _ _ 36 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 10220 # text = HIV-1 harboring mutations within two C/EBP sites were crippled in their ability to replicate in U937 promonocytic cells, indicating that these sites are required for replication. 1 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 harboring harboring NOUN NN Number=Sing _ _ _ _ 5 mutations mutation NOUN NNS Number=Plur _ _ _ _ 6 within within ADP IN _ _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 C/ C/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 EBP Ebp PROPN NNP Number=Sing _ _ _ _ 10 sites site NOUN NNS Number=Plur _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 crippled crippl ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 ability ability NOUN NN Number=Sing _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 replicate replicate VERB VB VerbForm=Inf _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 U937 U937 NUM CD NumType=Card _ _ _ _ 20 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 26 sites site NOUN NNS Number=Plur _ _ _ _ 27 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 10221 # text = These data identify C/EBP proteins as regulators of HIV-1 expression in monocytes/macrophages. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 identify identify NOUN NN Number=Sing _ _ _ _ 4 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 EBP EBP PROPN NNP Number=Sing _ _ _ _ 7 proteins protein NOUN NNS Number=Plur _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 regulators regulator NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 macrophages. macrophages. NOUN NN Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10222 # text = Document 0030012109 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012109 0030012109 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10223 # text = The ability of BHRF1 to inhibit apoptosis is dependent on stimulus and cell type. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ability ability NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 BHRF1 BHRF1 PROPN NNP Number=Sing _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 7 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 stimulus stimulus NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10224 # text = The development of resistance to host defense mechanisms such as tumor necrosis factor (TNF)- and Fas-mediated apoptosis of transformed or virus-infected cells may be a critical component in the development of disease. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 development development NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 resistance resistance NOUN NN Number=Sing _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 host host VERB VB VerbForm=Inf _ _ _ _ 7 defense defense NOUN NN Number=Sing _ _ _ _ 8 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 9 such such ADJ JJ Degree=Pos _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 tumor tumor NOUN NN Number=Sing _ _ _ _ 12 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 Fas- Fas- SYM SYM _ _ _ _ SpaceAfter=No 20 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 -infected -infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 may may AUX MD VerbForm=Fin _ _ _ _ 29 be be AUX VB VerbForm=Inf _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 critical critical ADJ JJ Degree=Pos _ _ _ _ 32 component component NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 development development NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 10225 # text = To find genes that protect cells from apoptosis, we used an expression cloning strategy and identified BHRF1, an Epstein-Barr virus (EBV) early-lytic-cycle protein with distant homology to Bcl-2, as an anti-apoptosis protein. 1 To to PART TO _ _ _ _ _ 2 find find VERB VB VerbForm=Inf _ _ _ _ 3 genes gene NOUN NNS Number=Plur _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 protect protect VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 cloning cloning NOUN NN Number=Sing _ _ _ _ 15 strategy strategy NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 BHRF1 BHRF1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 Barr Barr PROPN NNP Number=Sing _ _ _ _ 24 virus virus NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 early early ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 -lytic -lytic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 cycle cycle NOUN NN Number=Sing _ _ _ _ 32 protein protein NOUN NN Number=Sing _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 distant distant ADJ JJ Degree=Pos _ _ _ _ 35 homology homology NOUN NN Number=Sing _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 as as ADP IN _ _ _ _ _ 42 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 anti-apoptosis anti-apoptosis ADJ JJ Degree=Pos _ _ _ _ 44 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 10226 # text = Expression of BHRF1 in MCF-Fas cells conferred nearly complete resistance against both anti-Fas antibody and TNF-mediated apoptosis. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 BHRF1 BHRF1 PROPN NNP Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 MCF MCF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 Fas Fas PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 conferred confer VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 nearly nearly ADV RB _ _ _ _ _ 11 complete complete ADJ JJ Degree=Pos _ _ _ _ 12 resistance resistance NOUN NN Number=Sing _ _ _ _ 13 against against ADP IN _ _ _ _ _ 14 both both CCONJ CC _ _ _ _ _ 15 anti-Fas anti-Fas AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 antibody antibody ADJ JJ Degree=Pos _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10227 # text = In addition, BHRF1 protected these cells from monocyte-mediated killing but failed to protect them from killing mediated by lymphokine-activated killer cells. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 BHRF1 BHRF1 NUM CD NumType=Card _ _ _ _ 5 protected protect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 monocyte- monocyte- SYM NFP _ _ _ _ SpaceAfter=No 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 killing kille VERB VBG VerbForm=Ger _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 protect protect VERB VB VerbForm=Inf _ _ _ _ 16 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 killing kill NOUN NN Number=Sing _ _ _ _ 19 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 lymphokine lymphokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 killer killer NOUN NN Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 10228 # text = The ability of BHRF1 to protect MCF-Fas cells from apoptosis induced by various stimuli was identical to that of Bcl-2 and Bcl-xL. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ability ability NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 BHRF1 BHRF1 PROPN NNP Number=Sing _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 protect protect VERB VB VerbForm=Inf _ _ _ _ 7 MCF MCF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Fas Fas PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 various various ADJ JJ Degree=Pos _ _ _ _ 16 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 identical identical ADJ JJ Degree=Pos _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 xL xL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 10229 # text = Moreover, the mechanism of action of BHRF1 resembled that of Bcl-2 and Bcl-xL as it inhibited TNF- and anti-Fas-induced activation of two enzymes participating in the apoptosis pathway, cytosolic phospholipase 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 action action NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 BHRF1 BHRF1 PROPN NNP Number=Sing _ _ _ _ 9 resembled resemble VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 Bcl Bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 xL xL NOUN NN Number=Sing _ _ _ _ 19 as as SCONJ IN _ _ _ _ _ 20 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 21 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 anti-Fas-induced anti-Fas-induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 two two NUM CD NumType=Card _ _ _ _ 29 enzymes enzyme NOUN NNS Number=Plur _ _ _ _ 30 participating participate VERB VBG VerbForm=Ger _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 34 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 37 phospholipase phospholipase NOUN NN Number=Sing _ _ _ _ # sent_id = 10230 # text = A2 and caspase-3/CPP32, but did not interfere with the activation of NF-kappaB-like transcription factors. 1 A2 A2 NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 caspase-3/CPP32 caspase-3/CPP32 NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 but but CCONJ CC _ _ _ _ _ 6 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 interfere interfere VERB VB VerbForm=Inf _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 like like ADJ JJ Degree=Pos _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 10231 # text = A putative function of BHRF1 in EBV-infected epithelial cells may be to protect virus-infected cells from TNF- and/or anti-Fas- induced cell death in order to maximize virus production. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 putative putative ADJ JJ Degree=Pos _ _ _ _ 3 function function NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 BHRF1 BHRF1 PROPN NNP Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 may may AUX MD VerbForm=Fin _ _ _ _ 13 be be VERB VB VerbForm=Inf _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 protect protect VERB VB VerbForm=Inf _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ SpaceAfter=No 24 / / PUNCT , _ _ _ _ SpaceAfter=No 25 or or CCONJ CC _ _ _ _ _ 26 anti anti X AFX _ _ _ _ SpaceAfter=No 27 -Fas -Fas ADV RB _ _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ _ 29 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 death death NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 order order NOUN NN Number=Sing _ _ _ _ 34 to to PART TO _ _ _ _ _ 35 maximize maximize VERB VB VerbForm=Inf _ _ _ _ 36 virus virus NOUN NN Number=Sing _ _ _ _ 37 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 10232 # text = Surprisingly, expression of neither BHRF1 nor Bcl-2 in a B-cell line, BJAB, protected the cells from anti-Fas-mediated apoptosis even though they increased the survival of serum-starved cells. 1 Surprisingly surprisingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 neither neither DET DT _ _ _ _ _ 6 BHRF1 BHRF1 PROPN NNP Number=Sing _ _ _ _ 7 nor nor CCONJ CC _ _ _ _ _ 8 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 BJAB BJAB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 protected protect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 anti-Fas- anti-Fas- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 apoptosis apoptosis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 even even ADV RB _ _ _ _ _ 28 though though SCONJ IN _ _ _ _ _ 29 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 30 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 survival survival NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 serum serum NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 starved starve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 10233 # text = Thus, the protective role of BHRF1 against apoptosis resembles that of Bcl-2 in being cell type specific and dependent on the apoptotic stimulus. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 protective protective ADJ JJ Degree=Pos _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 BHRF1 BHRF1 NUM CD NumType=Card _ _ _ _ 8 against against ADP IN _ _ _ _ _ 9 apoptosis apoptosis ADJ JJ Degree=Pos _ _ _ _ 10 resembles resemble NOUN NNS Number=Plur _ _ _ _ 11 that that ADV WRB PronType=Dem _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 in in SCONJ IN _ _ _ _ _ 17 being being AUX VBG VerbForm=Ger _ _ _ _ 18 cell cell VERB VB VerbForm=Inf _ _ _ _ 19 type type NOUN NN Number=Sing _ _ _ _ 20 specific specific ADJ JJ Degree=Pos _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 23 on on ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 26 stimulus stimulus NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10234 # text = Document 0030012117 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012117 0030012117 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10235 # text = In vitro suppression of programmed cell death of B cells by tissue inhibitor of metalloproteinases-1. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 3 suppression suppression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 programmed programm VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 death death NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 B b ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 tissue tissue NOUN NN Number=Sing _ _ _ _ 13 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 metalloproteinases metalloproteinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10236 # text = Cellular pathways for induction of programmed cell death (PCD) have been identified, but little is known about specific extracellular matrix processes that may affect apoptosis along those pathways. 1 Cellular cellular ADJ JJ Degree=Pos _ _ _ _ 2 pathways pathway NOUN NNS Number=Plur _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 induction induction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 programmed programm VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 death death NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 PCD pCd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 14 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 little little ADJ JJ Degree=Pos _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 about about ADP IN _ _ _ _ _ 21 specific specific ADJ JJ Degree=Pos _ _ _ _ 22 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 23 matrix matrix NOUN NN Number=Sing _ _ _ _ 24 processes process NOUN NNS Number=Plur _ _ _ _ 25 that that PRON WDT PronType=Rel _ _ _ _ 26 may may AUX MD VerbForm=Fin _ _ _ _ 27 affect affect VERB VB VerbForm=Inf _ _ _ _ 28 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 29 along along ADP IN _ _ _ _ _ 30 those those DET DT Number=Plur|PronType=Dem _ _ _ _ 31 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 10237 # text = In this study, a series of Burkitt's lymphoma (BL) cell lines were assayed for their expression of tissue inhibitor of metalloproteinases (TIMP)-1. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 series series NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Burkitt Burkitt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 's 's PART POS _ _ _ _ _ 10 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 BL BL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 lines line NOUN NNS Number=Plur _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 assayed assay VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 tissue tissue NOUN NN Number=Sing _ _ _ _ 23 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 metalloproteinases metalloproteinase NOUN NNS Number=Plur _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 TIMP TIMP NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 - - SYM SYM _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 10238 # text = Results indicate that TIMP-1-positive BL lines show resistance to cold-shock-induced apoptosis. 1 Results result NOUN NNS Number=Plur _ _ _ _ 2 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 TIMP Timp NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 positive positive ADJ JJ Degree=Pos _ _ _ _ 9 BL Bl NOUN NN Number=Sing _ _ _ _ 10 lines line NOUN NNS Number=Plur _ _ _ _ 11 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 resistance resistance NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 cold cold ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 shock shock NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 10239 # text = Furthermore, recombinant TIMP-1, but not TIMP-2 or a synthetic metalloproteinase inhibitor (BB-94), confers resistance to apoptosis induced by both CD95-dependent and -independent (cold shock, serum deprivation, and gamma-radiation) pathways in TIMP-1-negative BL lines. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 4 TIMP Timp NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 but but CCONJ CC _ _ _ _ _ 9 not not ADV RB _ _ _ _ _ 10 TIMP Timp NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 synthetic synthetic ADJ JJ Degree=Pos _ _ _ _ 16 metalloproteinase metalloproteinase NOUN NN Number=Sing _ _ _ _ 17 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 BB bb NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 94 94 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 confers confer NOUN NNS Number=Plur _ _ _ _ 25 resistance resistance NOUN NN Number=Sing _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 apoptosis apoptosis DET DT Number=Sing|PronType=Dem _ _ _ _ 28 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 both both DET DT _ _ _ _ _ 31 CD95 Cd95 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 independent independent ADJ JJ Degree=Pos _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 cold cold ADJ JJ Degree=Pos _ _ _ _ 39 shock shock NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 serum serum NOUN NN Number=Sing _ _ _ _ 42 deprivation deprivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 radiation radiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ _ 49 pathways pathway NOUN NNS Number=Plur _ _ _ _ 50 in in ADP IN _ _ _ _ _ 51 TIMP TIMP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 negative negative ADJ JJ Degree=Pos _ _ _ _ 56 BL Bl NOUN NN Number=Sing _ _ _ _ 57 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 10240 # text = TIMP-1 suppression of PCD is not due to metalloproteinase inhibition, as reduction and alkylation of the TIMP-1 did not abolish this activity. 1 TIMP Timp SYM NFP _ _ _ _ SpaceAfter=No 2 - - SYM SYM _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 suppression suppression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 PCD PCD PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 due due ADP IN _ _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 metalloproteinase metalloproteinase NOUN NN Number=Sing _ _ _ _ 12 inhibition inhibition NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 reduction reduction NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 alkylation alkylation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 TIMP Timp NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 not not PART RB _ _ _ _ _ 25 abolish abolish VERB VB VerbForm=Inf _ _ _ _ 26 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 10241 # text = Retroviral induction of TIMP-1 not only resulted in cell survival but also in continued DNA synthesis for up to 5 d in the absence of serum, while controls underwent apoptosis. 1 Retroviral Retroviral ADJ JJ Degree=Pos _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 TIMP TIMP NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 not not ADV RB _ _ _ _ _ 8 only only ADV RB _ _ _ _ _ 9 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 survival survival NOUN NN Number=Sing _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 continued continue ADJ JJ Degree=Pos _ _ _ _ 17 DNA dna NOUN NN Number=Sing _ _ _ _ 18 synthesis synthesis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 up up ADP RP _ _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 5 5 NUM CD NumType=Card _ _ _ _ 23 d d PROPN NNP Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 absence absence NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 serum serum NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 while while SCONJ IN _ _ _ _ _ 31 controls control NOUN NNS Number=Plur _ _ _ _ 32 underwent underwent ADJ JJ Degree=Pos _ _ _ _ 33 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 10242 # text = This resistance to apoptosis is reversed by anti-TIMP-1 antibodies, demonstrating that secreted TIMP-1 is active in blocking apoptosis. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 resistance resistance NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 reversed reverse VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 anti-TIMP anti-TIMP NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 antibodies antibody NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 demonstrating demonstrat VERB VBG VerbForm=Ger _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 secreted secret VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 TIMP Timp NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 active active ADJ JJ Degree=Pos _ _ _ _ 21 in in SCONJ IN _ _ _ _ _ 22 blocking block VERB VBG VerbForm=Ger _ _ _ _ 23 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 10243 # text = Furthermore, TIMP-1 upregulation induced expression of Bcl-XL but not Bcl-2 as well as decreased NF-kappaB activity as compared with controls. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 TIMP TIMP NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 XL XL PROPN NNP Number=Sing _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 as as ADV RB _ _ _ _ _ 19 well well ADV RB Degree=Pos _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ _ 26 as as SCONJ IN _ _ _ _ _ 27 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 controls control NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 10244 # text = These results demonstrate that TIMP-1 suppresses apoptosis in B cells and suggests a novel activity for TIMP-1 in tissue homeostasis. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 TIMP Timp NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 suppresses suppress NOUN NNS Number=Plur _ _ _ _ 9 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 B b ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 novel novel ADJ JJ Degree=Pos _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 TIMP TIMP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 tissue tissue ADJ JJ Degree=Pos _ _ _ _ 24 homeostasis homeostasis NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10245 # text = Document 0030012126 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012126 0030012126 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10246 # text = Cooperation between core binding factor and adjacent promoter elements contributes to the tissue-specific expression of interleukin-3. 1 Cooperation cooperation NOUN NN Number=Sing _ _ _ _ 2 between between ADP IN _ _ _ _ _ 3 core core NOUN NN Number=Sing _ _ _ _ 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 elements element NOUN NNS Number=Plur _ _ _ _ 10 contributes contribute NOUN NNS Number=Plur _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10247 # text = Tissue-specific expression of interleukin-3 (IL-3) is mediated via cis-acting elements located within 315 base pairs of the transcription start. 1 Tissue Tissue ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 specific specific ADJ JJ Degree=Pos _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 3 3 NUM CD NumType=Card _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 3 3 X LS _ _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 via via ADP IN _ _ _ _ _ 17 cis cis DET DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 18 -acting -act ADJ JJ Degree=Pos _ _ _ _ 19 elements element NOUN NNS Number=Plur _ _ _ _ 20 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 within within ADP IN _ _ _ _ _ 22 315 315 NUM CD NumType=Card _ _ _ _ 23 base base NOUN NN Number=Sing _ _ _ _ 24 pairs pair NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 start start NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 10248 # text = This is achieved in part through the positive activities of the AP-1 and Elf-1 sites in the IL-3 promoter. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 achieved achieve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 part part NOUN NN Number=Sing _ _ _ _ 6 through through ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 positive positive ADJ JJ Degree=Pos _ _ _ _ 9 activities activity NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 Elf Elf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 sites site NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 3 3 NUM CD NumType=Card _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 10249 # text = The contribution to T cell-specific expression by other promoter sites was assessed in a transient expression assay with IL-3 promoter constructs linked to a luciferase gene, focusing initially on the core binding factor (CBF) site, which is footprinted in vivo upon T cell activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 contribution contribution NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 other other ADJ JJ Degree=Pos _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 sites site NOUN NNS Number=Plur _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 assessed assess VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 transient transient ADJ JJ Degree=Pos _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 assay assay NOUN NN Number=Sing _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 3 3 NUM CD NumType=Card _ _ _ _ 24 promoter promoter NOUN NN Number=Sing _ _ _ _ 25 constructs construct NOUN NNS Number=Plur _ _ _ _ 26 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 focusing focus VERB VBG VerbForm=Ger _ _ _ _ 33 initially initially ADV RB _ _ _ _ _ 34 on on ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 core core NOUN NN Number=Sing _ _ _ _ 37 binding bind VERB VBG VerbForm=Ger _ _ _ _ 38 factor factor NOUN NN Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 CBF CBF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 which which PRON WDT PronType=Rel _ _ _ _ 45 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 46 footprinted footprint VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 vivo vivo NOUN NN Number=Sing _ _ _ _ 49 upon upon ADP IN _ _ _ _ _ 50 T t PROPN NNP Number=Sing _ _ _ _ 51 cell cell NOUN NN Number=Sing _ _ _ _ 52 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 10250 # text = Activity of the CBF site is shown to be critically dependent on the adjacent activator site Act-1. 1 Activity activity NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 CBF CBF PROPN NNP Number=Sing _ _ _ _ 5 site site NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 critically critically ADV RB _ _ _ _ _ 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 15 activator activator NOUN NN Number=Sing _ _ _ _ 16 site site NOUN NN Number=Sing _ _ _ _ 17 Act act NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 10251 # text = Together the Act-1 and CBF sites form a functional unit (AC unit) with dual activity. 1 Together together SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 Act act NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 CBF CBF NOUN NN Number=Sing _ _ _ _ 8 sites site NOUN NNS Number=Plur _ _ _ _ 9 form form ADP IN Typo=Yes _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 functional functional ADJ JJ Degree=Pos _ _ _ _ 12 unit unit NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 AC Ac NOUN NN Number=Sing _ _ _ _ 15 unit unit NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 dual dual ADJ JJ Degree=Pos _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 10252 # text = The AC unit is demonstrated to enhance basal activity of promoters both in fibroblasts and T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 AC Ac NOUN NN Number=Sing _ _ _ _ 3 unit unit NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 8 basal basal ADJ JJ Degree=Pos _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 promoters promoter NOUN NNS Number=Plur _ _ _ _ 12 both both CCONJ CC _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 T t ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 10253 # text = This activity is further inducible in activated T cells, but not in fibroblasts. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 activity activity NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 further further ADV RB _ _ _ _ _ 5 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 not not ADV RB _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 10254 # text = In addition to the already identified NIP repressor site, evidence is presented for a second repressor region that restricts promoter activity in fibroblasts. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 already already ADV RB _ _ _ _ _ 6 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 NIP Nip NOUN NN Number=Sing _ _ _ _ 8 repressor repressor NOUN NN Number=Sing _ _ _ _ 9 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 evidence evidence NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 presented present VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 17 repressor repressor NOUN NN Number=Sing _ _ _ _ 18 region region NOUN NN Number=Sing _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 restricts restrict VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 promoter promoter ADJ JJ Degree=Pos _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 10255 # text = Finally, a novel positive regulatory element has been mapped in the IL-3 promoter between nucleotide -180 and -210 that leads to increased expression in T cells. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 novel novel NOUN NN Number=Sing _ _ _ _ 5 positive positive ADJ JJ Degree=Pos _ _ _ _ 6 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 7 element element NOUN NN Number=Sing _ _ _ _ 8 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 10 mapped map VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 3 3 NUM CD NumType=Card _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 between between ADP IN _ _ _ _ _ 18 nucleotide nucleotide NOUN NN Number=Sing _ _ _ _ 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 180 180 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 - - SYM SYM _ _ _ _ SpaceAfter=No 23 210 210 NUM CD NumType=Card _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 increased increase VERB VB VerbForm=Inf _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 T t PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 10256 # text = Together these results demonstrate that T cell expression of IL-3 is not specified by the activity of a single tissue-specific element, but instead involves multiple interacting elements that provide both specific positive regulation in T cells and specific negative regulation in fibroblasts. 1 Together together SCONJ IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 results result NOUN NNS Number=Plur _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 3 3 NUM CD NumType=Card _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 specified specify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 single single ADJ JJ Degree=Pos _ _ _ _ 22 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 but but CCONJ CC _ _ _ _ _ 28 instead instead ADV RB _ _ _ _ _ 29 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 31 interacting interacting ADJ JJ Degree=Pos _ _ _ _ 32 elements element NOUN NNS Number=Plur _ _ _ _ 33 that that PRON WDT PronType=Rel _ _ _ _ 34 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 both both DET DT _ _ _ _ _ 36 specific specific ADJ JJ Degree=Pos _ _ _ _ 37 positive positive ADJ JJ Degree=Pos _ _ _ _ 38 regulation regulation NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 T t PROPN NNP Number=Sing _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 specific specific ADJ JJ Degree=Pos _ _ _ _ 44 negative negative ADJ JJ Degree=Pos _ _ _ _ 45 regulation regulation NOUN NN Number=Sing _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10257 # text = Document 0030012127 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012127 0030012127 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10258 # text = Relief of cyclin 1 Relief relief NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cyclin cyclin NOUN NN Number=Sing _ _ _ _ # sent_id = 10259 # text = A gene transcriptional inhibition during activation of human primary T lymphocytes via CD2 and CD28 adhesion molecules. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 gene gene ADJ JJ Degree=Pos _ _ _ _ 3 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 4 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 5 during during ADP IN _ _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 primary primary ADJ JJ Degree=Pos _ _ _ _ 10 T t NOUN NN Number=Sing _ _ _ _ 11 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 12 via via ADP IN _ _ _ _ _ 13 CD2 CD2 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 CD28 CD28 NUM CD NumType=Card _ _ _ _ 16 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 17 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10260 # text = Cyclin 1 Cyclin Cyclin PROPN NNP Number=Sing _ _ _ _ # sent_id = 10261 # text = A transcription is cell cycle regulated and induced by cell proliferative signals. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 cycle cycle NOUN NN Number=Sing _ _ _ _ 6 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 12 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 10262 # text = To understand the mechanisms underlined in this regulation in normal human cells, we have analysed in vivo protein-DNA interactions at the Cyclin A locus in primary T lymphocytes. 1 To to PART TO _ _ _ _ _ 2 understand understand VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 underlined underlin ADJ JJ Degree=Pos _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 regulation regulation NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 normal normal ADJ JJ Degree=Pos _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 15 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 analysed analyse VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 vivo vivo NOUN NN Number=Sing _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 DNA dna NOUN NN Number=Sing _ _ _ _ 22 interactions interaction NOUN NNS Number=Plur _ _ _ _ 23 at at ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 Cyclin Cyclin PROPN NNP Number=Sing _ _ _ _ 26 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 locus locus NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 primary primary ADJ JJ Degree=Pos _ _ _ _ 30 T T PROPN NNP Number=Sing _ _ _ _ 31 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 10263 # text = Stimulation of purified T lymphocytes by a combination of monoclonal antibodies directed at CD2 and CD28 adhesion molecules gives rise to a long lasting proliferation in the absence of accessory cells. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 combination combination NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 11 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 12 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 at at ADP IN _ _ _ _ _ 14 CD2 Cd2 NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 CD28 Cd28 NOUN NN Number=Sing _ _ _ _ 17 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 18 molecules molecule NOUN NNS Number=Plur _ _ _ _ 19 gives give VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 rise rise VERB VB VerbForm=Inf _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 long long ADJ JJ Degree=Pos _ _ _ _ 24 lasting lasting NOUN NN Number=Sing _ _ _ _ 25 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 absence absence NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 accessory accessory ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 10264 # text = Cyclin 1 Cyclin Cyclin PROPN NNP Number=Sing _ _ _ _ # sent_id = 10265 # text = A was observed after 4 days of costimulation with anti CD2 + CD28 whereas stimulation by anti CD2 or anti CD28 alone was not effective. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 after after ADP IN _ _ _ _ _ 5 4 4 NUM CD NumType=Card _ _ _ _ 6 days day NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 anti anti X AFX _ _ _ _ _ 11 CD2 CD2 NUM CD NumType=Card _ _ _ _ 12 + + SYM SYM _ _ _ _ _ 13 CD28 CD28 NUM CD NumType=Card _ _ _ _ 14 whereas whereas NOUN NNS Number=Plur _ _ _ _ 15 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 anti anti X AFX _ _ _ _ _ 18 CD2 CD2 NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 anti anti X AFX _ _ _ _ _ 21 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 22 alone alone ADV RB _ _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 not not PART RB _ _ _ _ _ 25 effective effective ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 10266 # text = In vivo genomic DMS footprinting revealed upstream of the major transcription initiation sites, the presence of at least three protein binding sites, two of which were constitutively occupied. 1 In in ADP IN _ _ _ _ _ 2 vivo vivo ADJ JJ Degree=Pos _ _ _ _ 3 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 4 DMS Dm NOUN NNS Number=Plur _ _ _ _ 5 footprinting footprint VERB VBG VerbForm=Ger _ _ _ _ 6 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 upstream upstream NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 major major ADJ JJ Degree=Pos _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 initiation initiation NOUN NN Number=Sing _ _ _ _ 13 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 presence presence NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 at at ADV RB _ _ _ _ _ 19 least least ADV RBS Degree=Sup _ _ _ _ 20 three three NUM CD NumType=Card _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ _ 22 binding binding VERB VBG VerbForm=Ger _ _ _ _ 23 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 two two NUM CD NumType=Card _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 which which PRON WDT PronType=Rel _ _ _ _ 28 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 constitutively constitutively ADV RB _ _ _ _ _ 30 occupied occupy VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 10267 # text = They bind in vitro respectively ATF-1 and NF-Y proteins. 1 They they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 2 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 vitro vitro NOUN NN Number=Sing _ _ _ _ 5 respectively respectively ADV RB _ _ _ _ _ 6 ATF Atf ADV RB _ _ _ _ SpaceAfter=No 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 Y y NOUN NN Number=Sing _ _ _ _ 13 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 10268 # text = The third site was occupied in quiescent cells or in cells stimulated by anti CD2 or anti CD28 alone. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 third third ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 site site NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 occupied occupy VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 quiescent quiescent ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 anti anti X AFX _ _ _ _ _ 15 CD2 Cd2 NOUN NN Number=Sing _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 anti anti X AFX _ _ _ _ _ 18 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 19 alone alone ADV RB _ _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 10269 # text = The mitogenic combination of anti CD2 + anti CD28 released the footprint as cells were committed to proliferation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 3 combination combination NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 anti anto X AFX _ _ _ _ _ 6 CD2 CD2 NOUN NN Number=Sing _ _ _ _ 7 + + SYM SYM _ _ _ _ _ 8 anti anti X AFX _ _ _ _ _ 9 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 10 released release VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 footprint footprint NOUN NN Number=Sing _ _ _ _ 13 as as SCONJ IN _ _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 committed commit ADJ JJ Degree=Pos _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 10270 # text = Consistent with theses results, nuclear extracts prepared from quiescent cells formed a specific complex with this element, whereas extracts prepared from cells treated with anti CD2 + anti CD28 failed to do so after cells entered a proliferative state. 1 Consistent consistent ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ SpaceAfter=No 4 s 's PART POS _ _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 extracts extract NOUN NNS Number=Plur _ _ _ _ 9 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 quiescent quiescent ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 specific specific ADJ JJ Degree=Pos _ _ _ _ 16 complex complex NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 19 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 whereas whereas SCONJ IN _ _ _ _ _ 22 extracts extract NOUN NNS Number=Plur _ _ _ _ 23 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 anti anti X AFX _ _ _ _ _ 29 CD2 Cd2 NOUN NN Number=Sing _ _ _ _ 30 + + SYM SYM _ _ _ _ _ 31 anti anti X AFX _ _ _ _ _ 32 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 33 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 to to PART TO _ _ _ _ _ 35 do do VERB VB VerbForm=Inf _ _ _ _ 36 so so ADV RB _ _ _ _ _ 37 after after SCONJ IN _ _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ _ 39 entered enter VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 40 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 41 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 42 state state NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10271 # text = Document 0030012134 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012134 0030012134 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10272 # text = A factor known to bind to endogenous 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 bind bind VERB VB VerbForm=Inf _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 endogenous endogenous X ADD _ _ _ _ _ # sent_id = 10273 # text = Ig heavy chain enhancer only in lymphocytes is a ubiquitously active transcription factor. 1 Ig ig ADJ JJ Degree=Pos _ _ _ _ 2 heavy heavy ADJ JJ Degree=Pos _ _ _ _ 3 chain chain NOUN NN Number=Sing _ _ _ _ 4 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 5 only only ADV RB _ _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 lymphocytes lymphocytes NOUN NNS Number=Plur _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 ubiquitously ubiquitously ADV RB _ _ _ _ _ 11 active active ADJ JJ Degree=Pos _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10274 # text = The transcriptional enhancer located in the first intron of the immunoglobulin heavy chain constant region is a major determinant of B-cell-specific expression of immunoglobulin genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 3 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 4 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 8 intron intron NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 12 heavy heavy ADJ JJ Degree=Pos _ _ _ _ 13 chain chain NOUN NN Number=Sing _ _ _ _ 14 constant constant ADJ JJ Degree=Pos _ _ _ _ 15 region region NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 major major ADJ JJ Degree=Pos _ _ _ _ 19 determinant determinant NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 28 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 10275 # text = Like other enhancers, the Ig heavy chain enhancer contains several short sequence motifs that bind specific transcription factors. 1 Like like ADP IN _ _ _ _ _ 2 other other ADJ JJ Degree=Pos _ _ _ _ 3 enhancers enhancer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 Ig ig PROPN NNP Number=Sing _ _ _ _ 7 heavy heavy ADJ JJ Degree=Pos _ _ _ _ 8 chain chain NOUN NN Number=Sing _ _ _ _ 9 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 10 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 several several ADJ JJ Degree=Pos _ _ _ _ 12 short short ADJ JJ Degree=Pos _ _ _ _ 13 sequence sequence NOUN NN Number=Sing _ _ _ _ 14 motifs motif NOUN NNS Number=Plur _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 10276 # text = Each binding site contributes to the overall activity of the enhancer, however no single element seems absolutely required for activity. 1 Each each DET DT _ _ _ _ _ 2 binding binding VERB VBG VerbForm=Ger _ _ _ _ 3 site site NOUN NN Number=Sing _ _ _ _ 4 contributes contribute NOUN NNS Number=Plur _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 overall overall ADJ JJ Degree=Pos _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 however however ADV RB _ _ _ _ _ 14 no no DET DT _ _ _ _ _ 15 single single ADJ JJ Degree=Pos _ _ _ _ 16 element element NOUN NN Number=Sing _ _ _ _ 17 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 absolutely absolutely ADV RB _ _ _ _ _ 19 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10277 # text = For a better understanding of the 1 For for ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 better better ADJ JJR Degree=Cmp _ _ _ _ 4 understanding understanding NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ # sent_id = 10278 # text = Ig heavy chain enhancer components, we have cloned and analyzed individual sequence elements. 1 Ig ig ADJ JJ Degree=Pos _ _ _ _ 2 heavy heavy ADJ JJ Degree=Pos _ _ _ _ 3 chain chain NOUN NN Number=Sing _ _ _ _ 4 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 5 components component NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 8 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 individual individual ADJ JJ Degree=Pos _ _ _ _ 13 sequence sequence NOUN NN Number=Sing _ _ _ _ 14 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 10279 # text = We find that the factor that binds to the E3 enhancer motif, CATGTGGC, is a ubiquitous transcription factor. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 find find VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 E3 E3 NOUN NN Number=Sing _ _ _ _ 11 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 12 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 CATGTGGC CATGTGGC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 10280 # text = It is present in an active form in both B cells and non-B cells, where it can mediate transcriptional activation in vitro and in vivo. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 active active ADJ JJ Degree=Pos _ _ _ _ 7 form form NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 both both DET DT _ _ _ _ _ 10 B b ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 non non X AFX _ _ _ _ SpaceAfter=No 14 -B -b ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 where where ADV WRB PronType=Rel _ _ _ _ 18 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 19 can can AUX MD VerbForm=Fin _ _ _ _ 20 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 21 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 vitro vitro NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 10281 # text = However, despite its ability to activate transcription of a transfected reporter gene, the factor is apparently unable to bind to the endogenous 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 despite despite ADP IN _ _ _ _ _ 4 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 5 ability ability NOUN NN Number=Sing _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 activate activate VERB VB VerbForm=Inf _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 reporter reporter NOUN NN Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 apparently apparently ADV RB _ _ _ _ _ 19 unable unable ADJ JJ Degree=Pos _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 bind bind VERB VB VerbForm=Inf _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 endogenous endogenous NOUN NN Number=Sing _ _ _ _ # sent_id = 10282 # text = Ig heavy chain enhancer in non-lymphoid cells: 1 Ig ig ADJ JJ Degree=Pos _ _ _ _ 2 heavy heavy ADJ JJ Degree=Pos _ _ _ _ 3 chain chain NOUN NN Number=Sing _ _ _ _ 4 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 non-lymphoid non-lymphoid ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 : : PUNCT : _ _ _ _ _ # sent_id = 10283 # text = In previous experiments by others, the characteristic in vivo footprint of this factor, designated NF-muE3, was detected in B cells but not in non-B cells. 1 In in ADP IN _ _ _ _ _ 2 previous previous ADJ JJ Degree=Pos _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 others other NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 characteristic characteristic NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 vivo vivo ADJ JJ Degree=Pos _ _ _ _ 11 footprint footprint NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 muE3 muE3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 B b ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 but but CCONJ CC _ _ _ _ _ 27 not not PART RB _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 non non X AFX _ _ _ _ SpaceAfter=No 30 -B -b ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 10284 # text = From this and other findings the picture emerges that there are at least three categories of factors which mediate cell-type-specific transcription in B lymphocytes: (a) cell-specific factors such as Oct-2A and Oct-2B that are not expressed in most other cell types: (b) ubiquitous factors such as NF-kappa 1 From from ADP IN _ _ _ _ _ 2 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 other other ADJ JJ Degree=Pos _ _ _ _ 5 findings finding NOUN NNS Number=Plur _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 picture picture NOUN NN Number=Sing _ _ _ _ 8 emerges emerge VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 there there PRON EX _ _ _ _ _ 11 are be VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 at at ADV RB _ _ _ _ _ 13 least least ADV RBS Degree=Sup _ _ _ _ 14 three three NUM CD NumType=Card _ _ _ _ 15 categories category NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 factors factor NOUN NNS Number=Plur _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 mediate mediate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 B b ADJ JJ Degree=Pos _ _ _ _ 28 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 : : PUNCT : _ _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 a a X LS _ _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 specific specific ADJ JJ Degree=Pos _ _ _ _ 36 factors factor NOUN NNS Number=Plur _ _ _ _ 37 such such ADJ JJ Degree=Pos _ _ _ _ 38 as as ADP IN _ _ _ _ _ 39 Oct-2A Oct-2A PROPN NNP Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 2B 2b NOUN NN Number=Sing _ _ _ _ 44 that that PRON WDT PronType=Rel _ _ _ _ 45 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 46 not not PART RB _ _ _ _ _ 47 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 most most ADJ JJS Degree=Sup _ _ _ _ 50 other other ADJ JJ Degree=Pos _ _ _ _ 51 cell cell NOUN NN Number=Sing _ _ _ _ 52 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 : : PUNCT : _ _ _ _ _ 54 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 55 b b X LS _ _ _ _ SpaceAfter=No 56 ) ) PUNCT -RRB- _ _ _ _ _ 57 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 58 factors factor NOUN NNS Number=Plur _ _ _ _ 59 such such ADJ JJ Degree=Pos _ _ _ _ 60 as as ADP IN _ _ _ _ _ 61 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 62 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 63 kappa kappa PROPN NNP Number=Sing _ _ _ _ # sent_id = 10285 # text = B that are constitutively active in B cells but are sequestered in an inactive form in other cells; (c) ubiquitously active factors, exemplified by the one binding to the E3 sequence motif. 1 B b NOUN NN Number=Sing _ _ _ _ 2 that that PRON WDT PronType=Rel _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 constitutively constitutively ADV RB _ _ _ _ _ 5 active active ADJ JJ Degree=Pos _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 B b ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 sequestered sequester VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 15 form form NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 other other ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 ; ; PUNCT , _ _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 c c X LS _ _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 ubiquitously ubiquitously ADV RB _ _ _ _ _ 24 active active ADJ JJ Degree=Pos _ _ _ _ 25 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 exemplified exemplify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 one one NOUN NN Number=Sing _ _ _ _ 31 binding binding VERB VBG VerbForm=Ger _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 E3 E3 NOUN NN Number=Sing _ _ _ _ 35 sequence sequence NOUN NN Number=Sing _ _ _ _ 36 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 10286 # text = This factor is present in an active form in a variety of cell types but is apparently unable to bind to the endogenous 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 present present ADJ JJ Degree=Pos _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 active active ADJ JJ Degree=Pos _ _ _ _ 8 form form NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 variety variety NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 types type NOUN NNS Number=Plur _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 apparently apparently ADV RB _ _ _ _ _ 18 unable unable ADJ JJ Degree=Pos _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 bind bind VERB VB VerbForm=Inf _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 endogenous endogenous NOUN NN Number=Sing _ _ _ _ # sent_id = 10287 # text = Ig heavy chain enhancer in non-B cells, perhaps due to a non-permissive chromatin structure of the Ig heavy chain locus. 1 Ig ig ADJ JJ Degree=Pos _ _ _ _ 2 heavy heavy ADJ JJ Degree=Pos _ _ _ _ 3 chain chain NOUN NN Number=Sing _ _ _ _ 4 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 non non X AFX _ _ _ _ SpaceAfter=No 7 -B -b ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 perhaps perhaps ADV RB _ _ _ _ _ 11 due due ADP IN _ _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 non-permissive non-permissive ADJ JJ Degree=Pos _ _ _ _ 15 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 16 structure structure NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 Ig ig PROPN NNP Number=Sing _ _ _ _ 20 heavy heavy ADJ JJ Degree=Pos _ _ _ _ 21 chain chain NOUN NN Number=Sing _ _ _ _ 22 locus locus NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10288 # text = Document 0030012135 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012135 0030012135 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10289 # text = Direct interaction of hematopoietic transcription factors PU.1 and GATA-1: functional antagonism in erythroid cells. 1 Direct direct ADJ JJ Degree=Pos _ _ _ _ 2 interaction interaction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factors factor NOUN NNS Number=Plur _ _ _ _ 7 PU.1 PU.1 PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 : : PUNCT : _ _ _ _ _ 13 functional functional ADJ JJ Degree=Pos _ _ _ _ 14 antagonism antagonism NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10290 # text = Malignant transformation usually inhibits terminal cell differentiation but the precise mechanisms involved are not understood. 1 Malignant malignant ADJ JJ Degree=Pos _ _ _ _ 2 transformation transformation NOUN NN Number=Sing _ _ _ _ 3 usually usually ADV RB _ _ _ _ _ 4 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 8 but but CCONJ CC _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 precise precise ADJ JJ Degree=Pos _ _ _ _ 11 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 12 involved involve ADJ JJ Degree=Pos _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 understood understand VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 10291 # text = PU.1 is a hematopoietic-specific Ets family transcription factor that is required for development of some lymphoid and myeloid lineages. 1 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 specific specific ADJ JJ Degree=Pos _ _ _ _ 7 Ets et NOUN NNS Number=Plur _ _ _ _ 8 family family NOUN NN Number=Sing _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 development development NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 some some DET DT _ _ _ _ _ 18 lymphoid lymphoid NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 21 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10292 # text = PU.1 can also act as an oncoprotein as activation of its expression in erythroid precursors by proviral insertion or transgenesis causes erythroleukemias in mice. 1 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 2 can can AUX MD VerbForm=Fin _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 act act VERB VB VerbForm=Inf _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 oncoprotein oncoprotein NOUN NN Number=Sing _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 15 precursors precursor NOUN NNS Number=Plur _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 proviral proviral ADJ JJ Degree=Pos _ _ _ _ 18 insertion insertion NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 transgenesis transgenesis PRON DT Number=Sing|PronType=Dem _ _ _ _ 21 causes cause VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 erythroleukemias erythroleukemia NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 10293 # text = Restoration of terminal differentiation in the mouse erythroleukemia (MEL) cells requires a decline in the level of PU.1, indicating that PU.1 can block erythroid differentiation. 1 Restoration restoration NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 4 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 mouse mouse NOUN NN Number=Sing _ _ _ _ 8 erythroleukemia erythroleukemia NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 MEL MEL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 decline decline NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 level level NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 PU.1 PU.1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 23 that that SCONJ IN _ _ _ _ _ 24 PU.1 PU.1 PROPN NNP Number=Sing _ _ _ _ 25 can can AUX MD VerbForm=Fin _ _ _ _ 26 block block VERB VB VerbForm=Inf _ _ _ _ 27 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 28 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 10294 # text = Here we investigate the mechanism by which PU.1 interferes with erythroid differentiation. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 investigate investigate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 PU.1 PU.1 PROPN NNP Number=Sing _ _ _ _ 9 interferes interfere VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 12 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 10295 # text = We find that PU.1 interacts directly with GATA-1, a zinc finger transcription factor required for erythroid differentiation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 find find VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 PU.1 PU.1 NUM CD NumType=Card _ _ _ _ 5 interacts interact NOUN NNS Number=Plur _ _ _ _ 6 directly directly ADV RB _ _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 zinc zinc NOUN NN Number=Sing _ _ _ _ 14 finger finger NOUN NN Number=Sing _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 erythroid erythroid VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 10296 # text = Interaction between PU.1 and GATA-1 requires intact DNA-binding domains in both proteins. 1 Interaction interaction NOUN NN Number=Sing _ _ _ _ 2 between between ADP IN _ _ _ _ _ 3 PU.1 Pu.1 PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 GATA GATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 requires require NOUN NNS Number=Plur _ _ _ _ 9 intact intact NOUN NN Number=Sing _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 domains domain NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 both both DET DT _ _ _ _ _ 16 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 10297 # text = PU.1 represses GATA-1-mediated transcriptional activation. 1 PU.1 Pu.1 PROPN NNP Number=Sing _ _ _ _ 2 represses represse VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 10298 # text = Both the DNA binding and transactivation domains of PU.1 are required for repression and both domains are also needed to block terminal differentiation in MEL cells. 1 Both both CCONJ CC _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 DNA dna NOUN NN Number=Sing _ _ _ _ 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 7 domains domain NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 repression repression NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 both both DET DT _ _ _ _ _ 16 domains domain NOUN NNS Number=Plur _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 also also ADV RB _ _ _ _ _ 19 needed need VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 block block VERB VB VerbForm=Inf _ _ _ _ 22 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 23 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 MEL Mel ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 10299 # text = We also show that ectopic expression of PU.1 in Xenopus embryos is sufficient to block erythropoiesis during normal development. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 ectopic ectopic ADJ JJ Degree=Pos _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 PU.1 Pu.1 PROPN NNP Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 Xenopus Xenopus PROPN NNP Number=Sing _ _ _ _ 11 embryos embryo NOUN NNS Number=Plur _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 block block VERB VB VerbForm=Inf _ _ _ _ 16 erythropoiesis erythropoiesis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 17 during during ADP IN _ _ _ _ _ 18 normal normal ADJ JJ Degree=Pos _ _ _ _ 19 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 10300 # text = Furthermore, introduction of exogenous GATA-1 in both MEL cells and Xenopus embryos and explants relieves the block to erythroid differentiation imposed by PU.1. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 introduction introduction NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 6 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 -1 -1 NUM CD NumType=Card _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 both both DET DT _ _ _ _ _ 10 MEL Mel ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 Xenopus Xenopus ADJ JJ Degree=Pos _ _ _ _ 14 embryos embryo NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 explants explant NOUN NNS Number=Plur _ _ _ _ 17 relieves relieve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 block block NOUN NN Number=Sing _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 erythroid erythroid VERB VB VerbForm=Inf _ _ _ _ 22 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 23 imposed impose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 PU.1 Pu.1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 10301 # text = Our results indicate that the stoichiometry of directly interacting but opposing transcription factors may be a crucial determinant governing processes of normal differentiation and malignant transformation. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 stoichiometry stoichiometry NOUN NN Number=Sing _ _ _ _ 7 of of SCONJ IN _ _ _ _ _ 8 directly directly ADV RB _ _ _ _ _ 9 interacting interact VERB VBG VerbForm=Ger _ _ _ _ 10 but but CCONJ CC _ _ _ _ _ 11 opposing oppos VERB VBG VerbForm=Ger _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factors factor NOUN NNS Number=Plur _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 18 determinant determinant NOUN NN Number=Sing _ _ _ _ 19 governing govern VERB VBG VerbForm=Ger _ _ _ _ 20 processes processe NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 normal normal ADJ JJ Degree=Pos _ _ _ _ 23 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 malignant malignant ADJ JJ Degree=Pos _ _ _ _ 26 transformation transformation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10302 # text = Document 0030012137 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012137 0030012137 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10303 # text = Phosphorylation of TRAF2 inhibits binding to the CD40 cytoplasmic domain. 1 Phosphorylation Phosphorylation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 TRAF2 TRAF2 NUM CD NumType=Card _ _ _ _ 4 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 5 binding bind VERB VBG VerbForm=Ger _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 9 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 10 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10304 # text = TRAF2 is a signal transducing adaptor molecule which binds to the CD40 cytoplasmic domain. 1 TRAF2 Traf2 NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 signal signal NOUN NN Number=Sing _ _ _ _ 5 transducing transduce VERB VBG VerbForm=Ger _ _ _ _ 6 adaptor adaptor NOUN NN Number=Sing _ _ _ _ 7 molecule molecule NOUN NN Number=Sing _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 13 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 14 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 10305 # text = We have found that it is phosphorylated, predominantly on serine residues, when transiently overexpressed in 293 cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 predominantly predominantly ADV RB _ _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 serine serine NOUN NN Number=Sing _ _ _ _ 12 residues residue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 when when ADV WRB PronType=Int _ _ _ _ 15 transiently transiently ADV RB _ _ _ _ _ 16 overexpressed overexpress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 293 293 NUM CD NumType=Card _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 10306 # text = The phosphorylation appears to be related to the signaling events that are activated by TRAF2 under these circumstances, since two nonfunctional mutants were found to be phosphorylated significantly less than the wild-type protein. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 3 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 related related ADJ JJ Degree=Pos _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 signaling signaling NOUN NN Number=Sing _ _ _ _ 10 events event NOUN NNS Number=Plur _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 TRAF2 TRAF2 NUM CD NumType=Card _ _ _ _ 16 under under ADP IN _ _ _ _ _ 17 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 18 circumstances circumstance NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 since since ADP IN _ _ _ _ _ 21 two two NUM CD NumType=Card _ _ _ _ 22 nonfunctional nonfunctional ADJ JJ Degree=Pos _ _ _ _ 23 mutants mutant NOUN NNS Number=Plur _ _ _ _ 24 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 be be AUX VB VerbForm=Inf _ _ _ _ 28 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 significantly significantly ADV RB _ _ _ _ _ 30 less less ADJ JJR Degree=Cmp _ _ _ _ 31 than than ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 type type NOUN NN Number=Sing _ _ _ _ 36 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 10307 # text = Furthermore, the phosphorylation status of TRAF2 had significant effects on the ability of the protein to bind to CD40, as evidenced by our observations that the CD40 cytoplasmic domain interacted preferentially with underphosphorylated TRAF2 and that phosphatase treatment significantly enhanced the binding of TRAF2 to CD40. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 5 status status NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 TRAF2 TRAF2 NUM CD NumType=Card _ _ _ _ 8 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 significant significant ADJ JJ Degree=Pos _ _ _ _ 10 effects effect NOUN NNS Number=Plur _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 ability ability NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 bind bind VERB VB VerbForm=Inf _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 as as SCONJ IN _ _ _ _ _ 23 evidenced evidence VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 26 observations observation NOUN NNS Number=Plur _ _ _ _ 27 that that SCONJ IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 30 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 31 domain domain NOUN NN Number=Sing _ _ _ _ 32 interacted interact VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 preferentially preferentially ADV RB _ _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 underphosphorylated underphosphorylated ADJ JJ Degree=Pos _ _ _ _ 36 TRAF2 Traf2 NOUN NN Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 39 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 40 treatment treatment NOUN NN Number=Sing _ _ _ _ 41 significantly significantly ADV RB _ _ _ _ _ 42 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 binding binding NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 TRAF2 Traf2 NOUN NN Number=Sing _ _ _ _ 47 to to ADP IN _ _ _ _ _ 48 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 10308 # text = We conclude from these studies that the phosphorylation of TRAF2 is likely to play an important role in regulating signaling by virtue of its ability to influence the CD40-TRAF2 interaction. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 studies study NOUN NNS Number=Plur _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 TRAF2 TRAF2 NUM CD NumType=Card _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 likely likely ADJ JJ Degree=Pos _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 play play VERB VB VerbForm=Inf _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 important important ADJ JJ Degree=Pos _ _ _ _ 17 role role NOUN NN Number=Sing _ _ _ _ 18 in in SCONJ IN _ _ _ _ _ 19 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 20 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 virtue virtue NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 25 ability ability NOUN NN Number=Sing _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 influence influence VERB VB VerbForm=Inf _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 CD40 CD40 NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 TRAF2 Traf2 NOUN NN Number=Sing _ _ _ _ 32 interaction interaction NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 10309 # text = Copyright 1999 Academic Press. 1 Copyright copyright NOUN NN Number=Sing _ _ _ _ 2 1999 1999 NUM CD NumType=Card _ _ _ _ 3 Academic academic PROPN NNP Number=Sing _ _ _ _ 4 Press. Press. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10310 # text = Document 0030012151 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012151 0030012151 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10311 # text = Signaling pathways mediated by the TNF- and cytokine-receptor families target a common cis-element of the IFN regulatory factor 1 promoter. 1 Signaling signal VERB VBG VerbForm=Ger _ _ _ _ 2 pathways pathway NOUN NNS Number=Plur _ _ _ _ 3 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 TNF Tnf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 families family NOUN NNS Number=Plur _ _ _ _ 13 target target VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 common common ADJ JJ Degree=Pos _ _ _ _ 16 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 element element NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 IFN Ifn PROPN NNP Number=Sing _ _ _ _ 22 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ _ 24 1 1 NUM CD NumType=Card _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10312 # text = CD40 activation of B cells is strongly influenced by the presence of cytokines. 1 CD40 CD40 NUM CD NumType=Card _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 B b ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 strongly strongly ADV RB _ _ _ _ _ 8 influenced influence VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 presence presence NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 10313 # text = However, the molecular basis for the interplay between these distinct stimuli is not clearly delineated. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 5 basis basis NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 interplay interplay NOUN NN Number=Sing _ _ _ _ 9 between between ADP IN _ _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 12 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 clearly clearly ADV RB _ _ _ _ _ 16 delineated delineated VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 10314 # text = IFN regulatory factor 1 (IRF-1) is a transcription factor activated by either CD40 or cytokines. 1 IFN Ifn ADP IN _ _ _ _ _ 2 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 1 1 NUM CD NumType=Card _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 IRF IRF NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 X LS _ _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 either either CCONJ CC _ _ _ _ _ 17 CD40 CD40 NOUN NN Number=Sing _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 10315 # text = We have found that these different sets of signals target a common cis-acting element in the promoter of this gene, the IRF-1 gamma-activated site (GAS). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 different different ADJ JJ Degree=Pos _ _ _ _ 7 sets set NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 signals signal NOUN NNS Number=Plur _ _ _ _ 10 target target VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 common common ADJ JJ Degree=Pos _ _ _ _ 13 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 acting act VERB VBG VerbForm=Ger _ _ _ _ 16 element element NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 site site NOUN NN Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 GAS Gas PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 10316 # text = Targeting of the IRF-1 GAS is not confined to activation via CD40 but extends to other stimuli that mimic the CD40 signaling cascade, like TNF-alpha and EBV. 1 Targeting targeting NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 GAS gas NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 confined confine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 via via ADP IN _ _ _ _ _ 14 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 extends extend VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 other other ADJ JJ Degree=Pos _ _ _ _ 19 stimuli stimuli NOUN NNS Number=Plur _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 mimic mimic ADJ JJ Degree=Pos _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 24 signaling signaling NOUN NN Number=Sing _ _ _ _ 25 cascade cascade NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 like like ADP IN _ _ _ _ _ 28 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 alpha alpha PROPN NNP Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 10317 # text = In contrast to induction of STATs by cytokines, the IRF-1 GAS-binding complex activated by CD40, TNF-alpha, or EBV contains 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 induction induction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 STATs STAT NOUN NNS Number=Plur _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 GAS gas NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 complex complex NOUN NN Number=Sing _ _ _ _ 18 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 EBV EBV PROPN NNP Number=Sing _ _ _ _ 28 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ # sent_id = 10318 # text = Rel proteins, specifically p50 and p65. 1 Rel Rel NOUN NN Number=Sing _ _ _ _ 2 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 specifically specifically ADV RB _ _ _ _ _ 5 p50 p50 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 10319 # text = In this system, simultaneous exposure to CD40L together with either IL-4 or IFN-gamma does not lead to the activation of novel Rel/STAT complexes. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 simultaneous simultaneous ADJ JJ Degree=Pos _ _ _ _ 6 exposure exposure NOUN NN Number=Sing _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 CD40L Cd40l VERB VB VerbForm=Inf _ _ _ _ 9 together together ADV RB _ _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 either either DET DT _ _ _ _ _ 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 4 4 NUM CD NumType=Card _ _ _ _ 15 or or CCONJ CC _ _ _ _ _ 16 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 gamma gamma NOUN NN Number=Sing _ _ _ _ 19 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 lead lead VERB VB VerbForm=Inf _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 novel novel NOUN NN Number=Sing _ _ _ _ 27 Rel/ Rel/ PUNCT HYPH _ _ _ _ SpaceAfter=No 28 STAT Stat NOUN NN Number=Sing _ _ _ _ 29 complexes complexe NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 10320 # text = Given the importance of IRF-1 in a variety of biologic functions from proliferation to apoptosis, our findings support the notion that modulation of IRF-1 levels may be a critical control point in B cell activation. 1 Given give VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 importance importance NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 variety variety NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 biologic biologic ADJ JJ Degree=Pos _ _ _ _ 13 functions function NOUN NNS Number=Plur _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 20 findings finding NOUN NNS Number=Plur _ _ _ _ 21 support support VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 notion notion NOUN NN Number=Sing _ _ _ _ 24 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 25 modulation modulation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 levels level NOUN NNS Number=Plur _ _ _ _ 31 may may AUX MD VerbForm=Fin _ _ _ _ 32 be be AUX VB VerbForm=Inf _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 critical critical ADJ JJ Degree=Pos _ _ _ _ 35 control control NOUN NN Number=Sing _ _ _ _ 36 point point NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 B b ADJ JJ Degree=Pos _ _ _ _ 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10321 # text = Document 0030012160 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012160 0030012160 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10322 # text = Signal transduction pathways activated in endothelial cells following infection with Chlamydia pneumoniae. 1 Signal signal ADJ JJ Degree=Pos _ _ _ _ 2 transduction transduction NOUN NN Number=Sing _ _ _ _ 3 pathways pathway NOUN NNS Number=Plur _ _ _ _ 4 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 following follow VERB VBG VerbForm=Ger _ _ _ _ 9 infection infection NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 Chlamydia Chlamydia PROPN NNP Number=Sing _ _ _ _ 12 pneumoniae pneumonia NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10323 # text = Chlamydia pneumoniae is an important respiratory pathogen. 1 Chlamydia Chlamydia PROPN NNP Number=Sing _ _ _ _ 2 pneumoniae pneumoniae NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 important important ADJ JJ Degree=Pos _ _ _ _ 6 respiratory respiratory NOUN NN Number=Sing _ _ _ _ 7 pathogen pathogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 10324 # text = Recently, its presence has been demonstrated in atherosclerotic lesions. 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 4 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 presence presence NOUN NN Number=Sing _ _ _ _ 6 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 atherosclerotic atherosclerotic ADJ JJ Degree=Pos _ _ _ _ 11 lesions lesion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 10325 # text = In this study, we characterized C. pneumoniae-mediated activation of endothelial cells and demonstrated an enhanced expression of endothelial adhesion molecules followed by subsequent rolling, adhesion, and transmigration of leukocytes (monocytes, granulocytes). 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 characterized characterize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 C. c. PROPN NNP Number=Sing _ _ _ _ 8 pneumoniae pneumoniae NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 22 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 23 molecules molecule NOUN NNS Number=Plur _ _ _ _ 24 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 27 rolling rolling NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 transmigration transmigration NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 10326 # text = These effects were blocked by mAbs against endothelial and/or leukocyte adhesion molecules (beta1 and beta2 integrins). 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 mAbs mAb NOUN NNS Number=Plur _ _ _ _ 7 against against ADP IN _ _ _ _ _ 8 endothelial endothelial NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 or or CCONJ CC _ _ _ _ _ 12 leukocyte leukocyte VERB VB VerbForm=Inf _ _ _ _ 13 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 14 molecules molecule NOUN NNS Number=Plur _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 beta1 beta1 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 beta2 beta2 NUM CD NumType=Card _ _ _ _ 19 integrins integrin NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 10327 # text = Additionally, activation of different signal transduction pathways in C. pneumoniae-infected endothelial cells was shown: protein tyrosine phosphorylation, up-regulation of phosphorylated p42/p44 mitogen-activated protein kinase, and NF-kappaB activation/translocation occurred within 10-15 min. 1 Additionally additionally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 different different ADJ JJ Degree=Pos _ _ _ _ 6 signal signal NOUN NN Number=Sing _ _ _ _ 7 transduction transduction NOUN NN Number=Sing _ _ _ _ 8 pathways pathway NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 C. c. PROPN NNP Number=Sing _ _ _ _ 11 pneumoniae pneumonia NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 18 : : PUNCT : _ _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 21 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 up up ADP IN _ _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 regulation regulation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 p42 p42 NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 / / PUNCT , _ _ _ _ SpaceAfter=No 30 p44 p44 NUM CD NumType=Card _ _ _ _ 31 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 -activated -activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 protein protein NOUN NN Number=Sing _ _ _ _ 34 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 40 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 / / PUNCT , _ _ _ _ SpaceAfter=No 42 translocation translocation NOUN NN Number=Sing _ _ _ _ 43 occurred occur VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 within within ADP IN _ _ _ _ _ 45 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 46 - - SYM SYM _ _ _ _ SpaceAfter=No 47 15 15 NUM CD NumType=Card _ _ _ _ 48 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 10328 # text = Increased mRNA and surface expression of E-selectin, ICAM-1, and VCAM-1 were noted within hours. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 surface surface NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 E-selectin E-selectin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 ICAM ICAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 noted note VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 within within ADP IN _ _ _ _ _ 20 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 10329 # text = Thus, C. pneumoniae triggers a cascade of events that could lead to endothelial activation, inflammation, and thrombosis, which in turn may result in or may promote atherosclerosis. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 C. c. PROPN NNP Number=Sing _ _ _ _ 4 pneumoniae pneumoniae NOUN NN Number=Sing _ _ _ _ 5 triggers trigger VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 cascade cascade NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 events event NOUN NNS Number=Plur _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 could could AUX MD VerbForm=Fin _ _ _ _ 12 lead lead VERB VB VerbForm=Inf _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 thrombosis thrombosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 turn turn NOUN NN Number=Sing _ _ _ _ 25 may may AUX MD VerbForm=Fin _ _ _ _ 26 result result VERB VB VerbForm=Inf _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 may may AUX MD VerbForm=Fin _ _ _ _ 30 promote promote VERB VB VerbForm=Inf _ _ _ _ 31 atherosclerosis atherosclerosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10330 # text = Document 0030012161 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012161 0030012161 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10331 # text = A functional T-cell receptor signaling pathway is required for p95vav activity. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 functional functional ADJ JJ Degree=Pos _ _ _ _ 3 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ _ 6 signaling signaling NOUN NN Number=Sing _ _ _ _ 7 pathway pathway NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 p95vav p95vave NOUN NN Number=Sing _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10332 # text = Stimulation of the T-cell antigen receptor (TCR) induces activation of multiple tyrosine kinases, resulting in phosphorylation of numerous intracellular substrates. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 antigen antigen NOUN NN Number=Sing _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 TCR TCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 induces induce NOUN NNS Number=Plur _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 15 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 16 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 resulting result VERB VBG VerbForm=Ger _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 numerous numerous ADJ JJ Degree=Pos _ _ _ _ 23 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 24 substrates substrate NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 10333 # text = One substrate is p95vav, which is expressed exclusively in hematopoietic and trophoblast cells. 1 One one NUM CD NumType=Card _ _ _ _ 2 substrate substrate NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 p95vav p95vave NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 exclusively exclusively ADV RB _ _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 trophoblast trophoblast ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 10334 # text = It contains a number of structural motifs, including Src homology 2, Src homology 3, and pleckstrin homology domains and a putative guanine nucleotide exchange domain. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 number number NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 structural structural ADJ JJ Degree=Pos _ _ _ _ 7 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 including include VERB VBG VerbForm=Ger _ _ _ _ 10 Src Src PROPN NNP Number=Sing _ _ _ _ 11 homology homology NOUN NN Number=Sing _ _ _ _ 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 Src Src PROPN NNP Number=Sing _ _ _ _ 15 homology homology NOUN NN Number=Sing _ _ _ _ 16 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 pleckstrin pleckstrin ADJ JJ Degree=Pos _ _ _ _ 20 homology homology NOUN NN Number=Sing _ _ _ _ 21 domains domain NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 putative putative ADJ JJ Degree=Pos _ _ _ _ 25 guanine guanine NOUN NN Number=Sing _ _ _ _ 26 nucleotide nucleotide NOUN NN Number=Sing _ _ _ _ 27 exchange exchange NOUN NN Number=Sing _ _ _ _ 28 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 10335 # text = The role of p95vav in TCR-mediated signaling processes is unclear. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p95vav p95vave NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 signaling signaling NOUN NN Number=Sing _ _ _ _ 10 processes process NOUN NNS Number=Plur _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 unclear unclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 10336 # text = Here, we show that overexpression of p95vav alone in Jurkat T cells leads to activation of the nuclear factors, including NFAT, involved in interleukin-2 expression. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 p95vav p95vave NOUN NN Number=Sing _ _ _ _ 9 alone alone ADV RB _ _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 12 T T PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 including include VERB VBG VerbForm=Ger _ _ _ _ 23 NFAT Nfat ADV RB _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 involved involved ADJ JJ Degree=Pos _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 2 2 NUM CD NumType=Card _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 10337 # text = Furthermore, p95vav synergizes with TCR stimulation in inducing NFAT- and interleukin-2-dependent transcription. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 p95vav p95vave VERB VBP Abbr=Yes|Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 synergizes synergize NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 TCR Tcr NOUN NN Number=Sing _ _ _ _ 7 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 8 in in SCONJ IN _ _ _ _ _ 9 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 10 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 10338 # text = In contrast, NFAT activation by a G-protein-coupled receptor is not modulated by p95vav overexpression, suggesting that the effect is specific to the TCR signaling pathways. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 G- g- NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 protein- protein- PUNCT : _ _ _ _ SpaceAfter=No 10 coupled couple VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 modulated modulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 p95vav p95vave NOUN NN Number=Sing _ _ _ _ 17 overexpression overexpression NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 effect effect NOUN NN Number=Sing _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 TCR Tcr NOUN NN Number=Sing _ _ _ _ 28 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 29 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 10339 # text = Although removal of the first 67 amino acids of p95vav activates its transforming potential in NIH 3T3 cells, this region appears to be required for its function in T cells. 1 Although although SCONJ IN _ _ _ _ _ 2 removal removal NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 6 67 67 NUM CD NumType=Card _ _ _ _ 7 amino amino NOUN NN Number=Sing _ _ _ _ 8 acids acid NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 p95vav p95vave NOUN NN Number=Sing _ _ _ _ 11 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 transforming transforming VERB VBG VerbForm=Ger _ _ _ _ 14 potential potential NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 NIH Nih PROPN NNP Number=Sing _ _ _ _ 17 3T3 3T3 NUM CD NumType=Card _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 21 region region NOUN NN Number=Sing _ _ _ _ 22 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 be be AUX VB VerbForm=Inf _ _ _ _ 25 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 28 function function NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 T t PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 10340 # text = We further demonstrate that the p95vav-induced NFAT activation is not mimicked by Ras activation, though its function is dependent upon Ras and Raf. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 p95vav p95vave NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 NFAT Nfat NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 mimicked mimick VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 Ras Ras PROPN NNP Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 though though SCONJ IN _ _ _ _ _ 19 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 function function NOUN NN Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 23 upon upon ADP IN _ _ _ _ _ 24 Ras Ras PROPN NNP Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 Raf Raf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 10341 # text = Furthermore, the activating function of p95vav is blocked by FK506, suggesting that its activity also depends on calcineurin. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 activating activate VERB VBG VerbForm=Ger _ _ _ _ 5 function function NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 p95vav p95vav NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 FK506 FK506 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 also also ADV RB _ _ _ _ _ 18 depends depend VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 10342 # text = To further dissect p95vav involvement in TCR signaling, we analyzed various Jurkat mutants deficient in TCR signaling function or TCR expression and showed that an intact TCR signaling pathway is required for p95vav to function. 1 To to ADP IN _ _ _ _ _ 2 further further ADJ JJ Degree=Pos _ _ _ _ 3 dissect dissect NOUN NN Number=Sing _ _ _ _ 4 p95vav p95vave NOUN NN Number=Sing _ _ _ _ 5 involvement involvement NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 TCR Tcr NOUN NN Number=Sing _ _ _ _ 8 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 various various ADJ JJ Degree=Pos _ _ _ _ 13 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 14 mutants mutant NOUN NNS Number=Plur _ _ _ _ 15 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 TCR Tcr NOUN NN Number=Sing _ _ _ _ 18 signaling signaling NOUN NN Number=Sing _ _ _ _ 19 function function NOUN NN Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 TCR Tcr NOUN NN Number=Sing _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 intact intact NOUN NN Number=Sing _ _ _ _ 28 TCR Tcr NOUN NN Number=Sing _ _ _ _ 29 signaling signale VERB VBG VerbForm=Ger _ _ _ _ 30 pathway pathway NOUN NN Number=Sing _ _ _ _ 31 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 for for ADP IN _ _ _ _ _ 34 p95vav p95vave NOUN NN Number=Sing _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 function function VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 10343 # text = However, overexpression of p95vav does not appear to influence TCR-induced protein tyrosine phosphorylation or increases in cytoplasmic free calcium. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 p95vav p95vav NOUN NN Number=Sing _ _ _ _ 6 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 appear appear VERB VB VerbForm=Inf _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 influence influence VERB VB VerbForm=Inf _ _ _ _ 11 TCR Tcr ADV RBR Degree=Cmp _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 16 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 increases increase NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 21 free free ADJ JJ Degree=Pos _ _ _ _ 22 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 10344 # text = Taken together, our data suggest that p95vav plays an important role at an yet unidentified proximal position in the TCR signaling cascade. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 5 data data NOUN NN Number=Sing _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 p95vav p95vave NOUN NN Number=Sing _ _ _ _ 9 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 important important ADJ JJ Degree=Pos _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 at at ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 yet yet ADV RB _ _ _ _ _ 16 unidentified unidentified ADJ JJ Degree=Pos _ _ _ _ 17 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 18 position position NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 TCR Tcr NOUN NN Number=Sing _ _ _ _ 22 signaling signaling NOUN NN Number=Sing _ _ _ _ 23 cascade cascade NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10345 # text = Document 0030012169 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012169 0030012169 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10346 # text = Transcription factors in immune-mediated disease. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 immune-mediated immune-mediated ADJ JJ Degree=Pos _ _ _ _ 5 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10347 # text = A large amount of detailed information about the intracellular proteins regulating NF-kappa B activation and the cellular response to NF-kappa B activation has emerged recently. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 large large ADJ JJ Degree=Pos _ _ _ _ 3 amount amount NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 detailed detailed ADJ JJ Degree=Pos _ _ _ _ 6 information information NOUN NN Number=Sing _ _ _ _ 7 about about ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ _ 11 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 20 response response NOUN NN Number=Sing _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 emerged emerge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 recently recently ADV RB _ _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 10348 # text = Several small molecules, an antisense oligonucleotide, and gene therapeutic agents that inhibit NF-kappa b activation have been described. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 small small ADJ JJ Degree=Pos _ _ _ _ 3 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 antisense antisense ADJ JJ Degree=Pos _ _ _ _ 7 oligonucleotide oligonucleotide NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 12 agents agent NOUN NNS Number=Plur _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 inhibit inhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 b b NOUN NN Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 22 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 10349 # text = Despite this, there are still significant gaps in our understanding of this process and its consequences. 1 Despite despite ADP IN _ _ _ _ _ 2 this this PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 there there PRON EX _ _ _ _ _ 5 are be VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 still still ADV RB _ _ _ _ _ 7 significant significant ADJ JJ Degree=Pos _ _ _ _ 8 gaps gap NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 11 understanding understanding NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 14 process process NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 17 consequences consequences NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 10350 # text = In contrast, the characterization of transcription factors selectively regulating cytokine production by CD4+ T cell subsets is at a very early stage. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 characterization characterization NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 selectively selectively ADV RB _ _ _ _ _ 10 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 11 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 12 production production NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 + + SYM SYM _ _ _ _ _ 16 T t NUM CD NumType=Card _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 subsets subset NOUN NNS Number=Plur _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 at at ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 very very ADV RB _ _ _ _ _ 23 early early ADJ JJ Degree=Pos _ _ _ _ 24 stage stage NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 10351 # text = Three interacting proteins have recently been shown to contribute to subset-restricted expression of the IL-4 gene. 1 Three three NUM CD NumType=Card _ _ _ _ 2 interacting interacting ADJ JJ Degree=Pos _ _ _ _ 3 proteins protein NOUN NNS Number=Plur _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 recently recently ADV RB _ _ _ _ _ 6 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 7 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 subset subset VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 12 -restricted -restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 4 4 NUM CD NumType=Card _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 10352 # text = There are other elements regulating IL-4 gene expression, however, and the relative importance of these recently identified proteins has yet to be determined. 1 There there PRON EX _ _ _ _ _ 2 are be VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 elements element NOUN NNS Number=Plur _ _ _ _ 5 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 6 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 4 4 NUM CD NumType=Card _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 however however ADV RB _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 relative relative ADJ JJ Degree=Pos _ _ _ _ 17 importance importance NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 20 recently recently ADV RB _ _ _ _ _ 21 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 proteins protein NOUN NNS Number=Plur _ _ _ _ 23 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 yet yet ADV RB _ _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 be be AUX VB VerbForm=Inf _ _ _ _ 27 determined determined ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10353 # text = Document 0030012174 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012174 0030012174 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10354 # text = Separation of oxidant-initiated and redox-regulated steps in the NF-kappa B signal transduction pathway. 1 Separation separation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 oxidant oxidant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 initiated initiate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 redox redox VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 steps step NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 signal signal NOUN NN Number=Sing _ _ _ _ 18 transduction transduction NOUN NN Number=Sing _ _ _ _ 19 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10355 # text = Studies presented here show that overall NF-kappa B signal transduction begins with a parallel series of stimuli-specific pathways through which cytokines (tumor necrosis factor alpha), oxidants (hydrogen peroxide and mitomycin C), and phorbol ester (phorbol 12-myristate 13-acetate) individually initiate signaling. 1 Studies study NOUN NNS Number=Plur _ _ _ _ 2 presented present VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 overall overall ADJ JJ Degree=Pos _ _ _ _ 7 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 signal signal NOUN NN Number=Sing _ _ _ _ 12 transduction transduction NOUN NN Number=Sing _ _ _ _ 13 begins begin VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 parallel parallel ADJ JJ Degree=Pos _ _ _ _ 17 series series NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 stimuli-specific stimuli-specific ADJ JJ Degree=Pos _ _ _ _ 20 pathways pathway NOUN NNS Number=Plur _ _ _ _ 21 through through ADP IN _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 tumor tumor NOUN NN Number=Sing _ _ _ _ 26 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ _ 28 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 oxidants oxidant NOUN NNS Number=Plur _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 hydrogen hydrogen NUM CD NumType=Card _ _ _ _ 34 peroxide peroxide NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 mitomycin mitomycin NOUN NN Number=Sing _ _ _ _ 37 C C NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 42 ester ester NOUN NN Number=Sing _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 45 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 46 - - PUNCT : _ _ _ _ SpaceAfter=No 47 myristate myristate NOUN NN Number=Sing _ _ _ _ 48 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 49 - - PUNCT : _ _ _ _ SpaceAfter=No 50 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ _ 52 individually individually ADV RB _ _ _ _ _ 53 initiate initiate ADJ JJ Degree=Pos _ _ _ _ 54 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 10356 # text = These initial pathways culminate in a common pathway through which all of the stimulating agents ultimately signal NF-kappa B activation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 initial initial ADJ JJ Degree=Pos _ _ _ _ 3 pathways pathway NOUN NNS Number=Plur _ _ _ _ 4 culminate culminate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 common common ADJ JJ Degree=Pos _ _ _ _ 8 pathway pathway NOUN NN Number=Sing _ _ _ _ 9 through through ADP IN _ _ _ _ _ 10 which which PRON WDT PronType=Rel _ _ _ _ 11 all all DET DT _ _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 15 agents agent NOUN NNS Number=Plur _ _ _ _ 16 ultimately ultimately ADV RB _ _ _ _ _ 17 signal signal VERB VB VerbForm=Inf _ _ _ _ 18 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 10357 # text = We distinguish the stimuli-specific pathways by showing that the oxidative stimuli trigger NF-kappa B activation in only one of two human T-cell lines (Wurzburg but not Jurkat), whereas tumor necrosis factor alpha and phorbol 12-myristate 13-acetate readily stimulate in both lines. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 distinguish distinguish VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 stimuli-specific stimuli-specific ADJ JJ Degree=Pos _ _ _ _ 5 pathways pathway NOUN NNS Number=Plur _ _ _ _ 6 by by SCONJ IN _ _ _ _ _ 7 showing show VERB VBG VerbForm=Ger _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 11 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 12 trigger trigger NOUN NN Number=Sing _ _ _ _ 13 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 only only ADV RB _ _ _ _ _ 20 one one NUM CD NumType=Card _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 two two NUM CD NumType=Card _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 lines line NOUN NNS Number=Plur _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 Wurzburg Wurzburg PROPN NNP Number=Sing _ _ _ _ 29 but but CCONJ CC _ _ _ _ _ 30 not not ADV RB _ _ _ _ _ 31 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 whereas whereas SCONJ IN _ _ _ _ _ 35 tumor tumor NOUN NN Number=Sing _ _ _ _ 36 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 37 factor factor NOUN NN Number=Sing _ _ _ _ 38 alpha alpha NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 41 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 - - PUNCT : _ _ _ _ SpaceAfter=No 43 myristate myristate NOUN NN Number=Sing _ _ _ _ 44 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 - - PUNCT : _ _ _ _ SpaceAfter=No 46 acetate acetate NOUN NN Number=Sing _ _ _ _ 47 readily readily ADV RB _ _ _ _ _ 48 stimulate stimulate ADV RB Degree=Pos _ _ _ _ 49 in in ADP IN _ _ _ _ _ 50 both both DET DT _ _ _ _ _ 51 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 10358 # text = We propose the common pathway as the simplest way of accounting for the common requirements and properties of the signaling pathway. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 common common ADJ JJ Degree=Pos _ _ _ _ 5 pathway pathway NOUN NN Number=Sing _ _ _ _ 6 as as ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 simplest simplest ADJ JJS Degree=Sup _ _ _ _ 9 way way NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 accounting accounte NOUN NN Number=Sing _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 common common ADJ JJ Degree=Pos _ _ _ _ 15 requirements requirement NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 properties property NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 signaling signal NOUN NN Number=Sing _ _ _ _ 21 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10359 # text = We include a redox-regulatory mechanism(s) in this common pathway to account for the previously demonstrated redox regulation of NF-kappa B activation in Jurkat cells (in which oxidants don't activate NF-kappa B); we put tyrosine phosphorylation in the common pathway by showing that kinase activity (inhibitable by herbimycin A and tyrphostin 47) is required for NF-kappa B activation by all stimuli tested in both cell lines. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 include include VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 redox redox NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 7 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 s s X AFX _ _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 13 common common ADJ JJ Degree=Pos _ _ _ _ 14 pathway pathway NOUN NN Number=Sing _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 account account VERB VB VerbForm=Inf _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 previously previously ADV RB _ _ _ _ _ 20 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 redox redox NOUN NN Number=Sing _ _ _ _ 22 regulation regulation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa PROPN NNP Number=Sing _ _ _ _ 27 B b PROPN NNP Number=Sing _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 in in ADP IN _ _ _ _ _ 34 which which PRON WDT PronType=Rel _ _ _ _ 35 oxidants oxidant NOUN NNS Number=Plur _ _ _ _ 36 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 37 n't not PART RB _ _ _ _ _ 38 activate activate VERB VB VerbForm=Inf _ _ _ _ 39 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 kappa kappa NOUN NN Number=Sing _ _ _ _ 42 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 44 ; ; PUNCT , _ _ _ _ _ 45 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 46 put put VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 47 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 48 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 49 in in ADP IN _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 common common ADJ JJ Degree=Pos _ _ _ _ 52 pathway pathway NOUN NN Number=Sing _ _ _ _ 53 by by SCONJ IN _ _ _ _ _ 54 showing show VERB VBG VerbForm=Ger _ _ _ _ 55 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 56 kinase kinase NOUN NN Number=Sing _ _ _ _ 57 activity activity NOUN NN Number=Sing _ _ _ _ 58 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 59 inhibitable inhibitable ADJ JJ Degree=Pos _ _ _ _ 60 by by ADP IN _ _ _ _ _ 61 herbimycin herbimycin NOUN NN Number=Sing _ _ _ _ 62 A a NOUN NN Number=Sing _ _ _ _ 63 and and CCONJ CC _ _ _ _ _ 64 tyrphostin tyrphostin NOUN NN Number=Sing _ _ _ _ 65 47 47 NUM CD NumType=Card _ _ _ SpaceAfter=No 66 ) ) PUNCT -RRB- _ _ _ _ _ 67 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 68 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 69 for for ADP IN _ _ _ _ _ 70 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 71 - - PUNCT , _ _ _ _ SpaceAfter=No 72 kappa kappa NOUN NN Number=Sing _ _ _ _ 73 B b NOUN NN Number=Sing _ _ _ _ 74 activation activation NOUN NN Number=Sing _ _ _ _ 75 by by ADP IN _ _ _ _ _ 76 all all DET DT _ _ _ _ _ 77 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 78 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 79 in in ADP IN _ _ _ _ _ 80 both both DET DT _ _ _ _ _ 81 cell cell NOUN NN Number=Sing _ _ _ _ 82 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 83 . . PUNCT . _ _ _ _ _ # sent_id = 10360 # text = Since internal sites of oxidant production have been shown to play a key role in the cytokine-stimulated activation of NF-kappa B, and since tyrosine kinase and phosphatase activities are known to be altered by oxidants, these findings suggest that intracellular redox status controls NF-kappa B activation by regulating tyrosine phosphorylation event(s) within the common step of the NF-kappa B signal transduction pathway. 1 Since since ADP IN _ _ _ _ _ 2 internal internal ADJ JJ Degree=Pos _ _ _ _ 3 sites site NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 oxidant oxidant ADJ JJ Degree=Pos _ _ _ _ 6 production production NOUN NN Number=Sing _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 9 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 play play VERB VB VerbForm=Inf _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 key key ADJ JJ Degree=Pos _ _ _ _ 14 role role NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ 25 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 since since SCONJ IN _ _ _ _ _ 29 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 30 kinase kinase NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 33 activities activity NOUN NNS Number=Plur _ _ _ _ 34 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 to to PART TO _ _ _ _ _ 37 be be AUX VB VerbForm=Inf _ _ _ _ 38 altered alter VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 by by ADP IN _ _ _ _ _ 40 oxidants oxidant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 43 findings finding NOUN NNS Number=Plur _ _ _ _ 44 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 45 that that SCONJ IN _ _ _ _ _ 46 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 47 redox redox NOUN NN Number=Sing _ _ _ _ 48 status status NOUN NN Number=Sing _ _ _ _ 49 controls controls NOUN NN Number=Sing _ _ _ _ 50 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 kappa kappa NOUN NN Number=Sing _ _ _ _ 53 B b NOUN NN Number=Sing _ _ _ _ 54 activation activation NOUN NN Number=Sing _ _ _ _ 55 by by SCONJ IN _ _ _ _ _ 56 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 57 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 58 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 59 event event NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 61 s s X AFX _ _ _ _ SpaceAfter=No 62 ) ) PUNCT -RRB- _ _ _ _ _ 63 within within ADP IN _ _ _ _ _ 64 the the DET DT Definite=Def|PronType=Art _ _ _ _ 65 common common ADJ JJ Degree=Pos _ _ _ _ 66 step step NOUN NN Number=Sing _ _ _ _ 67 of of ADP IN _ _ _ _ _ 68 the the DET DT Definite=Def|PronType=Art _ _ _ _ 69 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 70 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 71 kappa kappa NOUN NN Number=Sing _ _ _ _ 72 B b NOUN NN Number=Sing _ _ _ _ 73 signal signal NOUN NN Number=Sing _ _ _ _ 74 transduction transduction NOUN NN Number=Sing _ _ _ _ 75 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 76 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10361 # text = Document 0030012180 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012180 0030012180 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10362 # text = CD30 ligation induces nuclear factor-kappa B activation in human T cell lines. 1 CD30 CD30 NUM CD NumType=Card _ _ _ _ 2 ligation ligation NOUN NN Number=Sing _ _ _ _ 3 induces induce NOUN NNS Number=Plur _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 T T PROPN NNP Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10363 # text = CD30 is a recently described member of the tumor necrosis factor/nerve growth factor receptor superfamily. 1 CD30 CD30 PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 recently recently ADV RB _ _ _ _ _ 5 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 member member NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 tumor tumor NOUN NN Number=Sing _ _ _ _ 10 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 nerve nerve NOUN NN Number=Sing _ _ _ _ 14 growth growth NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ _ 17 superfamily superfamily ADV RB _ _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 10364 # text = In this report, we show that following incubation of L540 cells (Hodgkin's disease-derived, T cell-like, CD30+ cells) with the agonistic anti-CD30 monoclonal antibodies (mAb) M44 and M67, two nuclear factor (NF)-kappa B DNA binding activities were induced in nuclear extracts, as determined in gel retardation assays. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 following follow VERB VBG VerbForm=Ger _ _ _ _ 9 incubation incubation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 L540 L540 PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 Hodgkin Hodgkin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 's 's PART POS _ _ _ _ _ 16 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 like like INTJ UH _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 CD30 CD30 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 + + SYM SYM _ _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 agonistic agonistic ADJ JJ Degree=Pos _ _ _ _ 32 anti-CD30 anti-CD30 NUM CD NumType=Card _ _ _ _ 33 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 34 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 mAb mAb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 M44 m44 NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 M67 M67 NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 two two NUM CD NumType=Card _ _ _ _ 43 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 44 factor factor NOUN NN Number=Sing _ _ _ _ 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 kappa kappa NOUN NN Number=Sing _ _ _ _ 50 B b NOUN NN Number=Sing _ _ _ _ 51 DNA dna NOUN NN Number=Sing _ _ _ _ 52 binding binding VERB VBG VerbForm=Ger _ _ _ _ 53 activities activity NOUN NNS Number=Plur _ _ _ _ 54 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 55 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 56 in in ADP IN _ _ _ _ _ 57 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 58 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 59 , , PUNCT , _ _ _ _ _ 60 as as SCONJ IN _ _ _ _ _ 61 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 62 in in ADP IN _ _ _ _ _ 63 gel gel NOUN NN Number=Sing _ _ _ _ 64 retardation retardation NOUN NN Number=Sing _ _ _ _ 65 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 66 . . PUNCT . _ _ _ _ _ # sent_id = 10365 # text = The effect of the mAb towards NF-kappa B activation was rapid, as it occurred within 20 min, and was sustained for up to 6 h. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 mAb mAb PROPN NNP Number=Sing _ _ _ _ 6 towards towards ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 rapid rapid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 as as SCONJ IN _ _ _ _ _ 16 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 17 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 within within ADP IN _ _ _ _ _ 19 20 20 NUM CD NumType=Card _ _ _ _ 20 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 sustained sustain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 up up ADV RB _ _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 6 6 NUM CD NumType=Card _ _ _ _ 29 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 10366 # text = By comparison, an isotype-matched antibody had no effect on NF-kappa B activation. 1 By by ADP IN _ _ _ _ _ 2 comparison comparison NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 isotype-matched isotype-matched ADJ JJ Degree=Pos _ _ _ _ 6 antibody antibody NOUN NN Number=Sing _ _ _ _ 7 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 no no DET DT _ _ _ _ _ 9 effect effect NOUN NN Number=Sing _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 10367 # text = Moreover, in human T helper (Th) clones functionally characterized as being of the type 0, type 1 and type 2 (28%, < 1% und 93% CD30+, respectively), the extent of CD30-mediated NF-kappa B activation correlated with the proportion of CD30+ cells. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 T T PROPN NNP Number=Sing _ _ _ _ 6 helper helper NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 Th th NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 clones clone NOUN NNS Number=Plur _ _ _ _ 11 functionally functionally ADV RB _ _ _ _ _ 12 characterized characterize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 as as SCONJ IN _ _ _ _ _ 14 being be AUX VBG VerbForm=Ger _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 type type NOUN NN Number=Sing _ _ _ _ 18 0 0 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 type type NOUN NN Number=Sing _ _ _ _ 21 1 1 NUM CD NumType=Card _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 type type NOUN NN Number=Sing _ _ _ _ 24 2 2 NUM CD NumType=Card _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 28 28 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 < < PUNCT -LRB- _ _ _ _ _ 30 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 % % SYM NN Number=Sing _ _ _ _ 32 und und ADJ JJ Degree=Pos _ _ _ _ 33 93 93 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 % % SYM NN Number=Sing _ _ _ _ 35 CD30 CD30 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 + + SYM SYM _ _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 extent extent NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 CD30 CD30 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 - - PUNCT : _ _ _ _ SpaceAfter=No 46 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 kappa kappa NOUN NN Number=Sing _ _ _ _ 50 B b NOUN NN Number=Sing _ _ _ _ 51 activation activation NOUN NN Number=Sing _ _ _ _ 52 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 53 with with ADP IN _ _ _ _ _ 54 the the DET DT Definite=Def|PronType=Art _ _ _ _ 55 proportion proportion NOUN NN Number=Sing _ _ _ _ 56 of of ADP IN _ _ _ _ _ 57 CD30 CD30 NUM CD NumType=Card _ _ _ SpaceAfter=No 58 + + SYM SYM _ _ _ _ _ 59 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 10368 # text = In all cell lines investigated, the NF-kappa B complexes induced following CD30 engagement were shown to contain p50 NF-kappa B1, p65 RelA, and possibly other transcription factors. 1 In in ADP IN _ _ _ _ _ 2 all all DET DT _ _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 lines line NOUN NNS Number=Plur _ _ _ _ 5 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 complexes complex NOUN NNS Number=Plur _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 following follow VERB VBG VerbForm=Ger _ _ _ _ 15 CD30 CD30 NUM CD NumType=Card _ _ _ _ 16 engagement engagement NOUN NN Number=Sing _ _ _ _ 17 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 contain contain VERB VB VerbForm=Inf _ _ _ _ 21 p50 p50 NUM CD NumType=Card _ _ _ _ 22 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B1 b1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 p65 p65 NUM CD NumType=Card _ _ _ _ 28 RelA Rela NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 possibly possibly ADV RB _ _ _ _ _ 32 other other ADJ JJ Degree=Pos _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 10369 # text = Collectively, our results demonstrate that nuclear translocation and activation of NF-kappa B rank among the short-term cellular responses elicited following CD30 ligation. 1 Collectively collectively ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 translocation translocation NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 rank rank NOUN NN Number=Sing _ _ _ _ 17 among among ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 short short ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 term term NOUN NN Number=Sing _ _ _ _ 22 cellular cellular NOUN NN Number=Sing _ _ _ _ 23 responses response NOUN NNS Number=Plur _ _ _ _ 24 elicited elicit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 following follow VERB VBG VerbForm=Ger _ _ _ _ 26 CD30 CD30 NUM CD NumType=Card _ _ _ _ 27 ligation ligation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10370 # text = Document 0030012181 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012181 0030012181 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10371 # text = Downregulation of Wilms' tumor gene (WT1) is not a prerequisite for erythroid or megakaryocytic differentiation of the leukemic cell line K562. 1 Downregulation Downregulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Wilms Wilm PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 4 ' 's PART POS _ _ _ _ _ 5 tumor tumor NOUN NN Number=Sing _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 WT1 WT1 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 prerequisite prerequisite NOUN NN Number=Sing _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 18 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 line line NOUN NN Number=Sing _ _ _ _ 24 K562 k562 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10372 # text = The Wilms' tumor gene (WT1) encodes a transcription factor of the zinc finger type. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Wilms Wilm NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 ' 's PART POS _ _ _ _ _ 4 tumor tumor NOUN NN Number=Sing _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 WT1 wt1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 zinc zinc NOUN NN Number=Sing _ _ _ _ 16 finger finger NOUN NN Number=Sing _ _ _ _ 17 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 10373 # text = A high expression of WT1 has been detected in a range of acute leukemias, and WT1 is downregulated during induced differentiation of some leukemic cell lines. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 high high ADJ JJ Degree=Pos _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 WT1 WT1 PROPN NNP Number=Sing _ _ _ _ 6 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 range range NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 acute acute ADJ JJ Degree=Pos _ _ _ _ 14 leukemias leukemia NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 WT1 WT1 PROPN NNP Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 downregulated downregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 during during ADP IN _ _ _ _ _ 21 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 some some DET DT _ _ _ _ _ 25 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 10374 # text = Overexpression of WT1 in some myeloid cell lines confers resistance to differentiation induction. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 WT1 wt1 NUM CD NumType=Card _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 some some DET DT _ _ _ _ _ 6 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 lines line NOUN NNS Number=Plur _ _ _ _ 9 confers confer NOUN NNS Number=Plur _ _ _ _ 10 resistance resistance VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 13 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 10375 # text = These observations suggest that a high WT1 expression in hematopoietic cells is incompatible with differentiation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 high high ADJ JJ Degree=Pos _ _ _ _ 7 WT1 wt1 NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 incompatible incompatible ADJ JJ Degree=Pos _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 10376 # text = In this study, each of the four different isoforms of WT1 was constitutively overexpressed in the leukemic cell line K562. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 each each DET DT _ _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 four four NUM CD NumType=Card _ _ _ _ 9 different different ADJ JJ Degree=Pos _ _ _ _ 10 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 WT1 WT1 PROPN NNP Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 constitutively constitutively ADV RB _ _ _ _ _ 15 overexpressed overexpress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 line line NOUN NN Number=Sing _ _ _ _ 21 K562 K562 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10377 # text = K562 cells express endogenous WT1, which is downregulated as a response to induced differentiation along the erythroid and megakaryocytic pathways. 1 K562 K562 NUM CD NumType=Card _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 express express ADJ JJ Degree=Pos _ _ _ _ 4 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 5 WT1 wt1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 downregulated downregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 response response NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 16 along along ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 21 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10378 # text = We now demonstrate that a forced exogenous expression of the four different isoforms of WT1 in K562 does not affect the differentiation response, as judged by accumulation of hemoglobin in response to hemin or the expression of megakaryocytic cell surface markers in response to 12-O-tetradecanoylphorbol-13-acetate (TPA). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 now now ADV RB _ _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 forced force VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 four four NUM CD NumType=Card _ _ _ _ 12 different different ADJ JJ Degree=Pos _ _ _ _ 13 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 WT1 WT1 PROPN NNP Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 K562 K562 NUM CD NumType=Card _ _ _ _ 18 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 affect affect VERB VB VerbForm=Inf _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 as as SCONJ IN _ _ _ _ _ 26 judged judge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 hemoglobin hemoglobin NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 response response NOUN NN Number=Sing _ _ _ _ 33 to to PART TO _ _ _ _ _ 34 hemin hemin VERB VB VerbForm=Inf _ _ _ _ 35 or or CCONJ CC _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 expression expression NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 surface surface NOUN NN Number=Sing _ _ _ _ 42 markers marker NOUN NNS Number=Plur _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 response response NOUN NN Number=Sing _ _ _ _ 45 to to ADP IN _ _ _ _ _ 46 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 47 - - PUNCT , _ _ _ _ SpaceAfter=No 48 O of INTJ UH _ _ _ _ SpaceAfter=No 49 -tetradecanoylphorbol -tetradecanoylphorbol INTJ UH _ _ _ _ SpaceAfter=No 50 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 51 -acetate -acetate NOUN NN Number=Sing _ _ _ _ 52 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 53 TPA TPA NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 10379 # text = We conclude that downregulation of WT1 during induced differentiation of K562 cells is not a prerequisite for erythroid or megakaryocytic differentiation of these cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 downregulation downregulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 WT1 WT1 NUM CD NumType=Card _ _ _ _ 7 during during ADP IN _ _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 K562 K562 NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 prerequisite prerequisite NOUN NN Number=Sing _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 21 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10380 # text = Document 0030012183 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012183 0030012183 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10381 # text = A critical role of the p75 tumor necrosis factor receptor (p75TNF-R) in organ inflammation independent of TNF, lymphotoxin alpha, or the p55TNF-R. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 critical critical ADJ JJ Degree=Pos _ _ _ _ 3 role role NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 p75 p75 NUM CD NumType=Card _ _ _ _ 7 tumor tumor NOUN NN Number=Sing _ _ _ _ 8 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 p75TNF p75TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 R R PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 organ organ ADJ JJ Degree=Pos _ _ _ _ 18 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 19 independent independent ADJ JJ Degree=Pos _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 lymphotoxin lymphotoxin ADP IN _ _ _ _ _ 24 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 p55TNF p55TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 R R PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10382 # text = Despite overwhelming evidence that enhanced production of the p75 tumor necrosis factor receptor (p75TNF-R) accompanies development of specific human inflammatory pathologies such as multi-organ failure during sepsis, inflammatory liver disease, pancreatitis, respiratory distress syndrome, or AIDS, the function of this receptor remains poorly defined in vivo. 1 Despite despite ADP IN _ _ _ _ _ 2 overwhelming overwhelming ADJ JJ Degree=Pos _ _ _ _ 3 evidence evidence NOUN NN Number=Sing _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 enhanced enhance VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 production production NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 p75 p75 NUM CD NumType=Card _ _ _ _ 10 tumor tumor NOUN NN Number=Sing _ _ _ _ 11 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 p75TNF p75tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 R r NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 accompanies accompany NOUN NNS Number=Plur _ _ _ _ 20 development development NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 specific specific ADJ JJ Degree=Pos _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 25 pathologies pathology NOUN NNS Number=Plur _ _ _ _ 26 such such ADJ JJ Degree=Pos _ _ _ _ 27 as as ADP IN _ _ _ _ _ 28 multi-organ multi-organ ADJ JJ Degree=Pos _ _ _ _ 29 failure failure NOUN NN Number=Sing _ _ _ _ 30 during during ADP IN _ _ _ _ _ 31 sepsis sepsis NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 34 liver liver NOUN NN Number=Sing _ _ _ _ 35 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 pancreatitis pancreatitis NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 respiratory respiratory ADJ JJ Degree=Pos _ _ _ _ 40 distress distress NOUN NN Number=Sing _ _ _ _ 41 syndrome syndrome NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 or or CCONJ CC _ _ _ _ _ 44 AIDS aids NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 function function NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 50 receptor receptor NOUN NN Number=Sing _ _ _ _ 51 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 52 poorly poorly ADV RB _ _ _ _ _ 53 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 54 in in ADP IN _ _ _ _ _ 55 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 10383 # text = We show here that at levels relevant to human disease, production of the human p75TNF-R in transgenic mice results in a severe inflammatory syndrome involving mainly the pancreas, liver, kidney, and lung, and characterized by constitutively increased NF-kappaB activity in the peripheral blood mononuclear cell compartment. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 at at ADP IN _ _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 production production NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 p75TNF p75TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 R R NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 21 mice mouse NOUN NNS Number=Plur _ _ _ _ 22 results result NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 severe severe ADJ JJ Degree=Pos _ _ _ _ 26 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 27 syndrome syndrome NOUN NN Number=Sing _ _ _ _ 28 involving involve VERB VBG VerbForm=Ger _ _ _ _ 29 mainly mainly ADV RB _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 pancreas pancrea NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 liver liver NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 kidney kidney NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 lung lung NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 by by ADP IN _ _ _ _ _ 43 constitutively constitutively ADV RB _ _ _ _ _ 44 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 48 activity activity NOUN NN Number=Sing _ _ _ _ 49 in in ADP IN _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 52 blood blood NOUN NN Number=Sing _ _ _ _ 53 mononuclear mononuclear NOUN NN Number=Sing _ _ _ _ 54 cell cell NOUN NN Number=Sing _ _ _ _ 55 compartment compartment NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 10384 # text = This process is shown to evolve independently of the presence of TNF, lymphotoxin alpha, or the p55TNF-R, although coexpression of a human TNF transgene accelerated pathology. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 process process NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 evolve evolve VERB VB VerbForm=Inf _ _ _ _ 7 independently independently ADV RB _ _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 presence presence NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 lymphotoxin lymphotoxin ADP IN _ _ _ _ _ 15 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 p55TNF p55tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 R r NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 although although SCONJ IN _ _ _ _ _ 24 coexpression coexpression NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 human human ADJ JJ Degree=Pos _ _ _ _ 28 TNF Tnf NOUN NN Number=Sing _ _ _ _ 29 transgene transgene PRON PRP _ _ _ _ _ 30 accelerated accelerate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 pathology pathology NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 10385 # text = These results establish an independent role for enhanced p75TNF-R production in the pathogenesis of inflammatory disease and implicate the direct involvement of this receptor in a wide range of human inflammatory pathologies. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 establish establish VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 independent independent ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 p75TNF p75tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 R r NOUN NN Number=Sing _ _ _ _ 12 production production NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 18 disease disease NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 implicate implicate VERB VB VerbForm=Inf _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 direct direct ADJ JJ Degree=Pos _ _ _ _ 23 involvement involvement NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 26 receptor receptor NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 wide wide ADJ JJ Degree=Pos _ _ _ _ 30 range range NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 human human ADJ JJ Degree=Pos _ _ _ _ 33 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 34 pathologies pathology NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10386 # text = Document 0030012196 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012196 0030012196 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10387 # text = A novel Ets-related transcription factor, Elf-1, binds to human immunodeficiency virus type 2 regulatory elements that are required for inducible trans activation in T cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 novel novel NOUN NN Number=Sing _ _ _ _ 3 Ets et NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 related related ADJ JJ Degree=Pos _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 human human VERB VB VerbForm=Inf _ _ _ _ 16 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 17 virus virus NOUN NN Number=Sing _ _ _ _ 18 type type NOUN NN Number=Sing _ _ _ _ 19 2 2 NUM CD NumType=Card _ _ _ _ 20 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 21 elements element NOUN NNS Number=Plur _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 27 trans tran NOUN NNS Number=Plur _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 T t PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10388 # text = Human immunodeficiency virus type 1 (HIV-1) and HIV-2 are structurally related retroviruses which both cause AIDS in humans. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 3 virus virus NOUN NN Number=Sing _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ _ 5 1 1 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 X LS _ _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 structurally structurally ADV RB _ _ _ _ _ 17 related related ADJ JJ Degree=Pos _ _ _ _ 18 retroviruses retroviruse NOUN NNS Number=Plur _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 both both DET DT _ _ _ _ _ 21 cause cause NOUN NN Number=Sing _ _ _ _ 22 AIDS aids NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 humans human NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 10389 # text = Although both viruses establish latency in quiescent human-peripheral-blood T cells, the asymptomatic phase of HIV-2 infection may be more prolonged than that of HIV-1. 1 Although although SCONJ IN _ _ _ _ _ 2 both both DET DT _ _ _ _ _ 3 viruses viruse NOUN NNS Number=Plur _ _ _ _ 4 establish establish VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 latency latency NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 quiescent quiescent ADJ JJ Degree=Pos _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 peripheral peripheral ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 blood blood NOUN NN Number=Sing _ _ _ _ 13 T t NOUN NN Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 asymptomatic asymptomatic ADJ JJ Degree=Pos _ _ _ _ 18 phase phase NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 infection infection NOUN NN Number=Sing _ _ _ _ 24 may may AUX MD VerbForm=Fin _ _ _ _ 25 be be AUX VB VerbForm=Inf _ _ _ _ 26 more more ADV RBR _ _ _ _ _ 27 prolonged prolong ADJ JJ Degree=Pos _ _ _ _ 28 than than ADP IN _ _ _ _ _ 29 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 10390 # text = The latent phases of both HIV-1 and HIV-2 infection have been shown to be disrupted by T-cell activation, a process that requires host cell transcription factors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 latent latent ADJ JJ Degree=Pos _ _ _ _ 3 phases phase NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 both both DET DT _ _ _ _ _ 6 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 infection infection NOUN NN Number=Sing _ _ _ _ 14 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 16 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 disrupted disrupt VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 process process NOUN NN Number=Sing _ _ _ _ 27 that that PRON WDT PronType=Rel _ _ _ _ 28 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 host host NOUN NN Number=Sing _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ _ 32 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 10391 # text = In the case of HIV-1, the transcription factor NF-kappa B is sufficient for inducible transcriptional activation. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 case case NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 20 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10392 # text = In contrast, factors in addition to NF-kappa B are required to activate HIV-2 transcription in infected T cells. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 factors factor NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 addition addition NOUN NN Number=Sing _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 activate activate VERB VB VerbForm=Inf _ _ _ _ 16 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 infected infect ADJ JJ Degree=Pos _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 10393 # text = In this report, we demonstrate that a novel Ets-related transcription factor, Elf-1, binds specifically to two purine-rich motifs in the HIV-2 enhancer. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 novel novel NOUN NN Number=Sing _ _ _ _ 10 Ets- Ets- SYM SYM _ _ _ _ SpaceAfter=No 11 related related ADJ JJ Degree=Pos _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 binds bind NOUN NNS Number=Plur _ _ _ _ 20 specifically specifically ADV RB _ _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 two two NUM CD NumType=Card _ _ _ _ 23 purine purine NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 rich rich ADJ JJ Degree=Pos _ _ _ _ 26 motifs motif NOUN NNS Number=Plur _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ _ 32 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 10394 # text = Mutagenesis experiments demonstrated that these Elf-1 binding sites are required for induction of HIV-2 transcription following T-cell-receptor-mediated T-cell activation. 1 Mutagenesis Mutagenesis PROPN NNP Number=Sing _ _ _ _ 2 experiments experiment NOUN NNS Number=Plur _ _ _ _ 3 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 Elf Elf NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 sites site NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 induction induction NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 following follow VERB VBG VerbForm=Ger _ _ _ _ 21 T-cell T-cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 receptor-mediated receptor-mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 10395 # text = Moreover, Elf-1 is the only factor present in activated T-cell nuclear extracts that binds to these sites in electrophoretic mobility shift assays. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 only only ADJ JJ Degree=Pos _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 present present ADJ JJ Degree=Pos _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 extracts extract NOUN NNS Number=Plur _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 21 sites site NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 24 mobility mobility NOUN NN Number=Sing _ _ _ _ 25 shift shift NOUN NN Number=Sing _ _ _ _ 26 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 10396 # text = Thus, Elf-1 is a novel transcription factor that appears to be required for the T-cell-receptor-mediated trans activation of HIV-2 gene expression. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 novel novel NOUN NN Number=Sing _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 T-cell T-cell ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 trans tran NOUN NNS Number=Plur _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ _ 29 gene gene NOUN NN Number=Sing _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 10397 # text = These results may explain differences in the clinical spectra of diseases caused by HIV-1 and HIV-2 and may also have implications for the design of therapeutic approaches to HIV-2 infection. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 may may AUX MD VerbForm=Fin _ _ _ _ 4 explain explain VERB VB VerbForm=Inf _ _ _ _ 5 differences difference NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 9 spectra spectra NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 diseases disease NOUN NNS Number=Plur _ _ _ _ 12 caused cause VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 may may AUX MD VerbForm=Fin _ _ _ _ 23 also also ADV RB _ _ _ _ _ 24 have have VERB VB VerbForm=Inf _ _ _ _ 25 implications implication NOUN NNS Number=Plur _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 design design NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 31 approaches approache NOUN NNS Number=Plur _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 2 2 NUM CD NumType=Card _ _ _ _ 36 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10398 # text = Document 0030012198 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012198 0030012198 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10399 # text = A T cell-specific enhancer in the interleukin-3 locus is activated cooperatively by Oct and NFAT elements within a DNase I-hypersensitive site. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 T T PROPN NNP Number=Sing _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 3 3 NUM CD NumType=Card _ _ _ _ 12 locus locus NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 cooperatively cooperatively ADV RB _ _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 Oct Oct PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 20 elements element NOUN NNS Number=Plur _ _ _ _ 21 within within ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 DNase DNase NOUN NN Number=Sing _ _ _ _ 24 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 27 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10400 # text = Interleukin-3 (IL-3) is a cytokine that is expressed primarily in activated T cells. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 3 3 NUM CD NumType=Card _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 3 3 X LS _ _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 primarily primarily ADV RB _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 10401 # text = Here we identified an inducible T cell-specific enhancer 14 kb upstream of the IL-3 gene that responded to activation of T cell receptor signaling pathways. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 6 T T PROPN NNP Number=Sing _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 11 14 14 NUM CD NumType=Card _ _ _ _ 12 kb kb NOUN NN Number=Sing _ _ _ _ 13 upstream upstream NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 3 3 NUM CD NumType=Card _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 responded respond VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 receptor receptor NOUN NN Number=Sing _ _ _ _ 28 signaling signale VERB VBG VerbForm=Ger _ _ _ _ 29 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 10402 # text = The IL-3 enhancer spanned an inducible cyclosporin A-sensitive DNase I-hypersensitive site found only in T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 3 3 NUM CD NumType=Card _ _ _ _ 5 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 6 spanned span VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 9 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 10 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 13 DNase DNase NOUN NN Number=Sing _ _ _ _ 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 17 site site NOUN NN Number=Sing _ _ _ _ 18 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 only only ADV RB _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 10403 # text = Four NFAT-like elements exist within the enhancer. 1 Four Four PROPN NNP Number=Sing _ _ _ _ 2 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 like like SCONJ IN _ _ _ _ _ 5 elements element NOUN NNS Number=Plur _ _ _ _ 6 exist exist VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 within within ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 10404 # text = The two most active NFAT-like elements were located at the center of the DNase I-hypersensitive site. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 most most ADV RBS _ _ _ _ _ 4 active active ADJ JJ Degree=Pos _ _ _ _ 5 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 like like SCONJ IN _ _ _ _ _ 8 elements element NOUN NNS Number=Plur _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 at at ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 center center NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 DNase DNase NOUN NN Number=Sing _ _ _ _ 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 20 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 10405 # text = One of these NFAT-like elements encompassed overlapping Oct- and NFATp/c-binding sites, which functioned in a highly synergistic manner. 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 like like SCONJ IN _ _ _ _ _ 7 elements element NOUN NNS Number=Plur _ _ _ _ 8 encompassed encompass VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 overlapping overlapp VERB VBG VerbForm=Ger _ _ _ _ 10 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 NFATp/c NFATp/c PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 -binding -binding VERB VBG VerbForm=Ger _ _ _ _ 15 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 functioned function VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 highly highly ADV RB _ _ _ _ _ 22 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 23 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 10406 # text = We suggest that the T cell-specific expression of the IL-3 gene is partly controlled through the enhancer by cooperation between Oct and NFAT family proteins. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 T T PROPN NNP Number=Sing _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 3 3 NUM CD NumType=Card _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 partly partly ADV RB _ _ _ _ _ 18 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 through through ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 cooperation cooperation NOUN NN Number=Sing _ _ _ _ 24 between between ADP IN _ _ _ _ _ 25 Oct Oct PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 28 family family NOUN NN Number=Sing _ _ _ _ 29 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10407 # text = Document 0030012203 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012203 0030012203 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10408 # text = An allosteric drug, o,o'-bismyristoyl thiamine disulfide, suppresses HIV-1 replication through prevention of nuclear translocation of both HIV-1 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 allosteric allosteric ADJ JJ Degree=Pos _ _ _ _ 3 drug drug NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 o of ADP IN Abbr=Yes _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ SpaceAfter=No 7 o of ADV RB _ _ _ _ SpaceAfter=No 8 '- '- PUNCT . _ _ _ _ SpaceAfter=No 9 bismyristoyl bismyristoyl ADJ JJ Degree=Pos _ _ _ _ 10 thiamine thiamine NOUN NN Number=Sing _ _ _ _ 11 disulfide disulfide NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 suppresses suppress VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 replication replication NOUN NN Number=Sing _ _ _ _ 18 through through ADP IN _ _ _ _ _ 19 prevention prevention NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 22 translocation translocation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 both both DET DT _ _ _ _ _ 25 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ # sent_id = 10409 # text = Tat and NF-kappa B. 1 Tat Tat PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10410 # text = The efficacy of o,o'-bismyristoyl thiamine disulfide (BMT) was examined in detail against HIV-1 laboratory isolates (HTLV-IIIB, JRFL, and MN), primary isolates (KMT and KMO), and simian immunodeficiency virus (SIVmac251) in vitro. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 efficacy efficacy NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 o of ADP IN Abbr=Yes _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ SpaceAfter=No 6 o of ADV RB _ _ _ _ SpaceAfter=No 7 '- '- PUNCT . _ _ _ _ SpaceAfter=No 8 bismyristoyl bismyristoyl ADJ JJ Degree=Pos _ _ _ _ 9 thiamine thiamine NOUN NN Number=Sing _ _ _ _ 10 disulfide disulfide NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 BMT BMT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 detail detail NOUN NN Number=Sing _ _ _ _ 18 against against ADP IN _ _ _ _ _ 19 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 laboratory laboratory NOUN NN Number=Sing _ _ _ _ 23 isolates isolate NOUN NNS Number=Plur _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 -IIIB -IIIB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 JRFL JRFL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 MN MN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 primary primary ADJ JJ Degree=Pos _ _ _ _ 35 isolates isolate NOUN NNS Number=Plur _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 KMT KMT PROPN NNP Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 KMO KMO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 simian simian ADJ JJ Degree=Pos _ _ _ _ 44 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 45 virus virus NOUN NN Number=Sing _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 SIVmac251 SIVmac251 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ _ 49 in in ADP IN _ _ _ _ _ 50 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 10411 # text = BMT inhibited the replication of HIV-1 in both laboratory and primary isolates in vitro. 1 BMT BMT PROPN NNP Number=Sing _ _ _ _ 2 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 replication replication NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 both both DET DT _ _ _ _ _ 11 laboratory laboratory NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 primary primary ADJ JJ Degree=Pos _ _ _ _ 14 isolates isolate NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 10412 # text = In addition, BMT exhibited antiviral activity against SIVmac251. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 BMT BMT PROPN NNP Number=Sing _ _ _ _ 5 exhibited exhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 antiviral antiviral ADJ JJ Degree=Pos _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 against against ADP IN _ _ _ _ _ 9 SIVmac251 SIVmac251 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 10413 # text = Minimizing energy studies of BMT structure reveal that a trans-disulfide of thiamine (holo drug) disulfide (TDS, protodrug) is allosterically transited to the reactive twisted disulfide of BMT (allo drug) by o,o'-bismyristoyl esterification of TDS. 1 Minimizing minimizing VERB VBG VerbForm=Ger _ _ _ _ 2 energy energy NOUN NN Number=Sing _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 BMT Bmt ADJ JJ Degree=Pos _ _ _ _ 6 structure structure NOUN NN Number=Sing _ _ _ _ 7 reveal reveal NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 trans tran NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 disulfide disulfide NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 thiamine thiamine PRON PRP _ _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 holo holo X AFX _ _ _ _ _ 17 drug drug NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 disulfide disulfide NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 TDS tds NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 protodrug protodrug NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 allosterically allosterically ADV RB _ _ _ _ _ 27 transited transit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 31 twisted twist VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 disulfide disulfide NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 BMT BMT PROPN NNP Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 allo allo X AFX _ _ _ _ _ 37 drug drug NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 by by ADP IN _ _ _ _ _ 40 o of ADP IN Abbr=Yes _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ SpaceAfter=No 42 o of ADV RB _ _ _ _ SpaceAfter=No 43 '- '- PUNCT . _ _ _ _ SpaceAfter=No 44 bismyristoyl bismyristoyl ADJ JJ Degree=Pos _ _ _ _ 45 esterification esterification NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 TDS TDS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 10414 # text = BMT inhibits nuclear translocation of both HIV-1 transactivator (TAT) and the cellular transcriptional nuclear factor-KB (NF-kappa B), resulting in the suppression of HIV-1 replication. 1 BMT Bmt ADJ JJS Degree=Sup _ _ _ _ 2 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 translocation translocation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 both both DET DT _ _ _ _ _ 7 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 TAT TAT NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 KB KB PROPN NNP Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 resulting result VERB VBG VerbForm=Ger _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 suppression suppression NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ _ 37 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10415 # text = Document 0030012206 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012206 0030012206 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10416 # text = Activation of nuclear factor kappa B in human lymphoblastoid cells by low-dose ionizing radiation. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 lymphoblastoid lymphoblastoid ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 low low ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dose dose NOUN NN Number=Sing _ _ _ _ 15 ionizing ionizing NOUN NN Number=Sing _ _ _ _ 16 radiation radiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10417 # text = Nuclear factor kappa B (NF-kappa B) is a pleiotropic transcription factor which is involved in the transcriptional regulation of several specific genes. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 pleiotropic pleiotropic ADJ JJ Degree=Pos _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 involved involved ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 22 regulation regulation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 several several ADJ JJ Degree=Pos _ _ _ _ 25 specific specific ADJ JJ Degree=Pos _ _ _ _ 26 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 10418 # text = Recent reports demonstrated that ionizing radiation in the dose range of 2-50 Gy results in expression of NF-kappa B in human KG-1 myeloid leukemia cells and human B-lymphocyte precursor cells; the precise mechanism involved and the significance are not yet known. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 reports report NOUN NNS Number=Plur _ _ _ _ 3 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 ionizing ionize VERB VBG VerbForm=Ger _ _ _ _ 6 radiation radiation NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 dose dose NOUN NN Number=Sing _ _ _ _ 10 range range NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 2- 2- SYM NFP _ _ _ _ SpaceAfter=No 13 50 50 NUM CD NumType=Card _ _ _ _ 14 Gy Gy ADJ JJ Degree=Pos _ _ _ _ 15 results result NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa NOUN NN Number=Sing _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 KG kg PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 29 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 human human ADJ JJ Degree=Pos _ _ _ _ 33 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 36 precursor precursor NOUN NN Number=Sing _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 ; ; PUNCT , _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 precise precise ADJ JJ Degree=Pos _ _ _ _ 41 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 42 involved involved ADJ JJ Degree=Pos _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 significance significance NOUN NN Number=Sing _ _ _ _ 46 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 47 not not PART RB _ _ _ _ _ 48 yet yet ADV RB _ _ _ _ _ 49 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 10419 # text = The present report demonstrates that even lower doses of ionizing radiation, 0.25-2.0 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ _ 4 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 even even ADV RB _ _ _ _ _ 7 lower lower ADJ JJR Degree=Cmp _ _ _ _ 8 doses dos NOUN NNS Number=Plur _ _ _ _ 9 of of SCONJ IN _ _ _ _ _ 10 ionizing ionizing VERB VBG VerbForm=Ger _ _ _ _ 11 radiation radiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 0.25 0.25 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - SYM SYM _ _ _ _ SpaceAfter=No 15 2.0 2.0 NUM CD NumType=Card _ _ _ _ # sent_id = 10420 # text = Gy, are capable of inducing expression of NF-kappa B in EBV-transformed 244B human lymphoblastoid cells. 1 Gy Gy PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 capable capable ADJ JJ Degree=Pos _ _ _ _ 5 of of SCONJ IN _ _ _ _ _ 6 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa PROPN NNP Number=Sing _ _ _ _ 12 B b PROPN NNP Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 244B 244b PROPN NNP Number=Sing _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 lymphoblastoid lymphoblastoid ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 10421 # text = These results are in a dose range where the viability of the cells remains very high. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 dose dose NOUN NN Number=Sing _ _ _ _ 7 range range NOUN NN Number=Sing _ _ _ _ 8 where where ADV WRB PronType=Rel _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 viability viability NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 very very ADV RB _ _ _ _ _ 16 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 10422 # text = After exposure to 137Cs gamma rays at a dose rate of 1.17 Gy/min, a maximum in expression of NF-kappa B was seen at 8 h after a 0.5-Gy exposure. 1 After after ADP IN _ _ _ _ _ 2 exposure exposure NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 137C 137C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 s 's PART POS _ _ _ _ _ 6 gamma gamma NOUN NN Number=Sing _ _ _ _ 7 rays ray NOUN NNS Number=Plur _ _ _ _ 8 at at ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 dose dose NOUN NN Number=Sing _ _ _ _ 11 rate rate NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 1.17 1.17 NUM CD NumType=Card _ _ _ _ 14 Gy/min Gy/min PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 maximum maximum NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa PROPN NNP Number=Sing _ _ _ _ 24 B b PROPN NNP Number=Sing _ _ _ _ 25 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 26 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 at at ADP IN _ _ _ _ _ 28 8 8 NUM CD NumType=Card _ _ _ _ 29 h h NOUN NN Number=Sing _ _ _ _ 30 after after ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 0.5 0.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 Gy Gy NOUN NN Number=Sing _ _ _ _ 35 exposure exposure NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 10423 # text = Time-course studies revealed a biphasic time-dependent expression after 0.5-, 1- and 2-Gy exposures. 1 Time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 course course NOUN NN Number=Sing _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ _ 5 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 biphasic biphasic ADJ JJ Degree=Pos _ _ _ _ 8 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 after after ADP IN _ _ _ _ _ 13 0.5 0.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT : _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 Gy Gy NOUN NN Number=Sing _ _ _ _ 22 exposures exposure NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 10424 # text = However, for each time examined, the expression of NF-kappa B was maximum after the 0.5-Gy exposure. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 each each DET DT _ _ _ _ _ 5 time time NOUN NN Number=Sing _ _ _ _ 6 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ 14 B b PROPN NNP Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 maximum maximum ADJ JJ Degree=Pos _ _ _ _ 17 after after ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 0.5 0.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 Gy Gy NOUN NN Number=Sing _ _ _ _ 22 exposure exposure NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 10425 # text = The expression of the p50 and p65 NF-kappa B subunits was also shown to be regulated differentially after exposures to 1.0 and 2.0 Gy. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 p50 p50 NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 p65 p65 NUM CD NumType=Card _ _ _ _ 8 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 subunits subunit NOUN NNS Number=Plur _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 differentially differentially ADV RB _ _ _ _ _ 20 after after ADP IN _ _ _ _ _ 21 exposures exposure NOUN NNS Number=Plur _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 1.0 1.0 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 2.0 2.0 NUM CD NumType=Card _ _ _ _ 26 Gy Gy NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10426 # text = Document 0030012208 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012208 0030012208 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10427 # text = Interleukin-10 stabilizes inhibitory kappaB-alpha in human monocytes. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 stabilizes stabilize NOUN NNS Number=Plur _ _ _ _ 5 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 alpha alpha X FW Foreign=Yes _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10428 # text = Interleukin-10 (IL-10) protects animals from lethal endotoxemia. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -10 -10 NUM CD NumType=Card _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 protects protect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 animals animal NOUN NNS Number=Plur _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 lethal lethal ADJ JJ Degree=Pos _ _ _ _ 12 endotoxemia endotoxemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 10429 # text = This beneficial effect is mediated, in part, by inhibition of inflammatory cytokine production, including tumor necrosis factor-alpha (TNF-alpha). 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 beneficial beneficial ADJ JJ Degree=Pos _ _ _ _ 3 effect effect NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 part part ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 14 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 15 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 including include VERB VBG VerbForm=Ger _ _ _ _ 18 tumor tumor NOUN NN Number=Sing _ _ _ _ 19 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 alpha alpha NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 10430 # text = Evidence suggests that IL-10 may inhibit activation of the transcription factor nuclear factor-kappaB (NF-kappaB) through an unknown mechanism. 1 Evidence evidence NOUN NN Number=Sing _ _ _ _ 2 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 10 10 NUM CD NumType=Card _ _ _ _ 7 may may AUX MD VerbForm=Fin _ _ _ _ 8 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 -kappaB -kappaB NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 through through ADP IN _ _ _ _ _ 23 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 unknown unknown ADJ JJ Degree=Pos _ _ _ _ 25 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 10431 # text = NF-kappaB activation in response to inflammatory signals is dependent upon degradation of its associated inhibitory peptide, inhibitory kappaB-alpha (IkappaB-alpha). 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 response response NOUN NN Number=Sing _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 9 signals signal NOUN NNS Number=Plur _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 upon upon ADP IN _ _ _ _ _ 13 degradation degradation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 18 peptide peptide NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 21 kappaB kappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 IkappaB- Ikappab- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 10432 # text = We hypothesized that IL-10 prevents human monocyte NF-kappaB activation and resultant TNF-alpha production by stabilization of IkappaB-alpha. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 hypothesized hypothesize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 10 10 NUM CD NumType=Card _ _ _ _ 7 prevents prevent NOUN NNS Number=Plur _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 resultant resultant NOUN NN Number=Sing _ _ _ _ 16 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 alpha alpha NOUN NN Number=Sing _ _ _ _ 19 production production NOUN NN Number=Sing _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 stabilization stabilization NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 IkappaB- Ikappab- NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 10433 # text = The purpose of this study was to determine the effect of IL-10 on lipopolysaccharide (LPS)-induced human monocyte TNF-alpha production, NF-kappaB activation, and IkappaB-alpha degradation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 purpose purpose NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 study study NOUN NN Number=Sing _ _ _ _ 6 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 determine determine VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 effect effect NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 10 10 NUM CD NumType=Card _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 LPS LPS INTJ UH _ _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 - - PUNCT : _ _ _ _ SpaceAfter=No 21 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 24 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 alpha alpha NOUN NN Number=Sing _ _ _ _ 27 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 IkappaB Ikappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 alpha alpha NOUN NN Number=Sing _ _ _ _ 38 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 10434 # text = Monocytes were isolated from human donors. 1 Monocytes Monocyte NOUN NNS Number=Plur _ _ _ _ 2 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 isolated isolate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 donors donor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ _ # sent_id = 10435 # text = Cells were stimulated with endotoxin (LPS, 100 ng/mL) with and without human IL-10 (10 ng/mL). 1 Cells cell NOUN NNS Number=Plur _ _ _ _ 2 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 endotoxin endotoxin NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 LPS LPS INTJ UH _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 100 100 NUM CD NumType=Card _ _ _ _ 10 ng/ ng/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 11 mL mL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 without without ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 IL-10 IL-10 NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 10 10 NUM CD NumType=Card _ _ _ _ 20 ng ng NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 mL mL NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 10436 # text = Following stimulation, TNF-alpha was measured in cell supernatants by ELISA, NF-kappaB activity by electrophoretic mobility shift assay, and IkappaB-alpha levels by Western blot. 1 Following follow VERB VBG VerbForm=Ger _ _ _ _ 2 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 measured measure VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 supernatants supernatant NOUN NNS Number=Plur _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 ELISA ELISA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 21 mobility mobility NOUN NN Number=Sing _ _ _ _ 22 shift shift NOUN NN Number=Sing _ _ _ _ 23 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 IkappaB Ikappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 alpha alpha NOUN NN Number=Sing _ _ _ _ 29 levels level NOUN NNS Number=Plur _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 Western western ADJ JJ Degree=Pos _ _ _ _ 32 blot blot NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 10437 # text = We observed that after LPS stimulation of human monocytes, TNF-alpha increased to 798+/-67 pg/mL (p < .001 versus control). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 4 after after ADP IN _ _ _ _ _ 5 LPS LPS ADJ JJ Degree=Pos _ _ _ _ 6 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 alpha alpha PROPN NNP Number=Sing _ _ _ _ 14 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 798+/-67 798+/-67 NUM CD NumType=Card _ _ _ _ 17 pg/mL pg/mL NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 p p NOUN NN Number=Sing _ _ _ _ 20 < < PUNCT -LRB- _ _ _ _ _ 21 .001 .001 NUM CD NumType=Card _ _ _ _ 22 versus versus ADJ JJ Degree=Pos _ _ _ _ 23 control control NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 10438 # text = IL-10 attenuated LPS-stimulated TNF-alpha production (297+/-54; p < .001 versus LPS alone). 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 attenuated attenuate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 LPS Lps NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 production production NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 297+/-54 297+/-54 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ; ; PUNCT , _ _ _ _ _ 15 p p NOUN NN Number=Sing _ _ _ _ 16 < < PUNCT -LRB- _ _ _ _ _ 17 .001 .001 NUM CD NumType=Card _ _ _ _ 18 versus versus ADP IN _ _ _ _ _ 19 LPS LPS PROPN NNP Number=Sing _ _ _ _ 20 alone alone ADV RB _ _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10439 # text = After LPS stimulation in human monocytes, IkappaB-alpha protein levels decreased, and NF-kappaB DNA binding increased. 1 After after ADP IN _ _ _ _ _ 2 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 3 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 IkappaB Ikappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 levels level NOUN NNS Number=Plur _ _ _ _ 13 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 19 DNA dna NOUN NN Number=Sing _ _ _ _ 20 binding binding VERB VBG VerbForm=Ger _ _ _ _ 21 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10440 # text = IL-10 pretreatment prevented LPS-induced decreases in IkappaB-alpha protein levels and attenuated NF-kappaB DNA binding. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 pretreatment pretreatment NOUN NN Number=Sing _ _ _ _ 5 prevented prevent VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 decreases decrease NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 levels level NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 attenuated attenuate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 DNA dna NOUN NN Number=Sing _ _ _ _ 22 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 10441 # text = IL-10 appears to prevent activation of NF-kappaB by preserving IkappaB-alpha protein levels, leading to a reduction in TNF-alpha release. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 prevent prevent VERB VB VerbForm=Inf _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 12 by by SCONJ IN _ _ _ _ _ 13 preserving preserve VERB VBG VerbForm=Ger _ _ _ _ 14 IkappaB Ikappab PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 leading lead VERB VBG VerbForm=Ger _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 reduction reduction NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 alpha alpha ADP IN _ _ _ _ _ 28 release release NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10442 # text = Document 0030012212 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012212 0030012212 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10443 # text = Human alveolar macrophages are markedly deficient in REF-1 and AP-1 DNA binding activity. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 alveolar alveolar NOUN NN Number=Sing _ _ _ _ 3 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 markedly markedly ADV RB _ _ _ _ _ 6 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 REF REF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 DNA dna NOUN NN Number=Sing _ _ _ _ 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10444 # text = Although many functions of human alveolar macrophages are altered compared with their precursor cell, the blood monocyte (monocyte), the reason(s) for these functional changes have not been determined. 1 Although although SCONJ IN _ _ _ _ _ 2 many many ADJ JJ Degree=Pos _ _ _ _ 3 functions function NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 alveolar alveolar NOUN NN Number=Sing _ _ _ _ 7 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 altered alter VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 compared compare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 precursor precursor NOUN NN Number=Sing _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 blood blood NOUN NN Number=Sing _ _ _ _ 18 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 reason reason NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 s s X AFX _ _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 30 functional functional ADJ JJ Degree=Pos _ _ _ _ 31 changes change NOUN NNS Number=Plur _ _ _ _ 32 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 not not PART RB _ _ _ _ _ 34 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 35 determined determin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 10445 # text = We recently reported that human alveolar macrophages do not express AP-1 DNA binding activity (Monick, M. M., Carter, A. B., Gudmundsson, G., Geist, L. J., and Hunninghake, G. W. (1998) 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 recently recently ADV RB _ _ _ _ _ 3 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 alveolar alveolar NOUN NN Number=Sing _ _ _ _ 7 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 8 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 express express VERB VB VerbForm=Inf _ _ _ _ 11 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 DNA dna NOUN NN Number=Sing _ _ _ _ 15 binding bind VERB VBG VerbForm=Ger _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 Monick Monick PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 M. M. PROPN NNP Number=Sing _ _ _ _ 21 M. M. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 Carter Carter PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 A. A. PROPN NNP Number=Sing _ _ _ _ 26 B. B. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 Gudmundsson Gudmundsson PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 G. G. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 Geist Geist PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 L. L. PROPN NNP Number=Sing _ _ _ _ 35 J. J. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 Hunninghake Hunninghake PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 G. G. PROPN NNP Number=Sing _ _ _ _ 41 W. W. PROPN NNP Number=Sing _ _ _ _ 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 1998 1998 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ _ # sent_id = 10446 # text = Am. 1 Am be PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ # sent_id = 10447 # text = J. Physiol. 275, L389-L397). 1 J. J. PROPN NNP Number=Sing _ _ _ _ 2 Physiol Physiol PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 . . PUNCT . _ _ _ _ _ 4 275 275 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 L389- l389- SYM SYM _ _ _ _ SpaceAfter=No 7 L397 L397 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 10448 # text = To determine why alveolar macrophages do not express AP-1 DNA binding activity, we first showed that there was not a decrease in expression of the FOS and JUN proteins that make up the AP-1 complex. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 why why ADV WRB PronType=Int _ _ _ _ 4 alveolar alveolar ADJ JJ Degree=Pos _ _ _ _ 5 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 6 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 express express VERB VB VerbForm=Inf _ _ _ _ 9 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 17 first first ADV RB _ _ _ _ _ 18 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 there there PRON EX _ _ _ _ _ 21 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 decrease decrease NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 FOS Fo NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 JUN Jun ADJ JJ Degree=Pos _ _ _ _ 32 proteins protein NOUN NNS Number=Plur _ _ _ _ 33 that that PRON WDT PronType=Rel _ _ _ _ 34 make make VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 up up ADP RP _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ _ 40 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 10449 # text = There was, however, a significant difference in the amounts of the nuclear protein, REF-1 (which regulates AP-1 DNA binding by altering the redox status of FOS and JUN proteins), in alveolar macrophages compared with monocytes. 1 There there PRON EX _ _ _ _ _ 2 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 however however ADV RB _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 significant significant ADJ JJ Degree=Pos _ _ _ _ 8 difference difference NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 amounts amount NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 REF REF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 which which PRON WDT PronType=Rel _ _ _ _ 22 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 DNA dna NOUN NN Number=Sing _ _ _ _ 27 binding bind VERB VBG VerbForm=Ger _ _ _ _ 28 by by SCONJ IN _ _ _ _ _ 29 altering alter VERB VBG VerbForm=Ger _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 redox redox NOUN NN Number=Sing _ _ _ _ 32 status status NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 FOS FOS PROPN NNP Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 JUN JUN PROPN NNP Number=Sing _ _ _ _ 37 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 alveolar alveolar ADJ JJ Degree=Pos _ _ _ _ 42 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 43 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 with with ADP IN _ _ _ _ _ 45 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 10450 # text = In addition, in vitro differentiation of monocytes to a macrophage-like cell resulted in decreased amounts of REF-1. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 6 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 macrophage macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 like like ADJ JJ Degree=Pos _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 decreased decreased VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 amounts amount NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 REF REF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 10451 # text = Finally, addition of REF-1 from activated monocytes to alveolar macrophage nuclear proteins resulted in a marked increase in AP-1 DNA binding. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 addition addition NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 REF REF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 alveolar alveolar VERB VB VerbForm=Inf _ _ _ _ 13 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 proteins protein NOUN NNS Number=Plur _ _ _ _ 16 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 increase increase NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 DNA dna NOUN NN Number=Sing _ _ _ _ 26 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 10452 # text = These studies strongly suggest that the process of differentiation of monocytes into alveolar macrophages is associated with a loss of REF-1 and AP-1 activity. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 strongly strongly ADV RB _ _ _ _ _ 4 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 process process NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 12 into into ADP IN _ _ _ _ _ 13 alveolar alveolar ADJ JJ Degree=Pos _ _ _ _ 14 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 loss loss NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 REF REF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 10453 # text = This observation may explain, in part, some of the functional differences observed for alveolar macrophages compared with monocytes. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 observation observation NOUN NN Number=Sing _ _ _ _ 3 may may AUX MD VerbForm=Fin _ _ _ _ 4 explain explain VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 part part NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 some some DET DT _ _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 functional functional ADJ JJ Degree=Pos _ _ _ _ 13 differences difference NOUN NNS Number=Plur _ _ _ _ 14 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 alveolar alveolar ADJ JJ Degree=Pos _ _ _ _ 17 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 18 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10454 # text = Document 0030012213 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012213 0030012213 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10455 # text = Control of cell cycle entry and apoptosis in B lymphocytes infected by Epstein-Barr virus. 1 Control Control NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 cycle cycle NOUN NN Number=Sing _ _ _ _ 5 entry entry NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 B b ADJ JJ Degree=Pos _ _ _ _ 10 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 11 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 Barr Barr PROPN NNP Number=Sing _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10456 # text = Infection of human B cells with Epstein-Barr virus (EBV) results in activation of the cell cycle and cell growth. 1 Infection Infection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 B b ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Barr Barr PROPN NNP Number=Sing _ _ _ _ 10 virus virus NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 results result NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 cycle cycle NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 10457 # text = To interpret the mechanisms by which EBV activates the cell, we have assayed many proteins involved in control of the G0 and G1 phases of the cell cycle and regulation of apoptosis. 1 To to PART TO _ _ _ _ _ 2 interpret interpret VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 EBV EBV PROPN NNP Number=Sing _ _ _ _ 8 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 13 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 assayed assay VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 many many ADJ JJ Degree=Pos _ _ _ _ 16 proteins protein NOUN NNS Number=Plur _ _ _ _ 17 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 control control NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 G0 G0 PROPN NNP Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 G1 G1 NUM CD NumType=Card _ _ _ _ 25 phases phasis NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 cycle cycle NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 regulation regulation NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 10458 # text = In EBV infection most of the changes, including the early induction of cyclin D2, are dependent on expression of EBV genes, but an alteration in the E2F-4 profile was partly independent of viral gene expression, presumably occurring in response to signal transduction activated when the virus binds to its receptor, CD21. 1 In in ADP IN _ _ _ _ _ 2 EBV EBV PROPN NNP Number=Sing _ _ _ _ 3 infection infection NOUN NN Number=Sing _ _ _ _ 4 most most ADJ JJS Degree=Sup _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 changes change NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 including include VERB VBG VerbForm=Ger _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 early early ADJ JJ Degree=Pos _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 cyclin cyclin NOUN NN Number=Sing _ _ _ _ 15 D2 d2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 EBV EBV PROPN NNP Number=Sing _ _ _ _ 23 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 but but CCONJ CC _ _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 alteration alteration NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 E2F E2f NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 4 4 NUM CD NumType=Card _ _ _ _ 33 profile profile NOUN NN Number=Sing _ _ _ _ 34 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 35 partly partly ADV RB _ _ _ _ _ 36 independent independent ADJ JJ Degree=Pos _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 viral viral ADJ JJ Degree=Pos _ _ _ _ 39 gene gene NOUN NN Number=Sing _ _ _ _ 40 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 presumably presumably ADV RB _ _ _ _ _ 43 occurring occurre VERB VBG VerbForm=Ger _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 response response NOUN NN Number=Sing _ _ _ _ 46 to to PART TO _ _ _ _ _ 47 signal signal VERB VB VerbForm=Inf _ _ _ _ 48 transduction transduction NOUN NN Number=Sing _ _ _ _ 49 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 50 when when ADV WRB PronType=Int _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 virus virus NOUN NN Number=Sing _ _ _ _ 53 binds bind NOUN NNS Number=Plur _ _ _ _ 54 to to ADP IN _ _ _ _ _ 55 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 56 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 , , PUNCT , _ _ _ _ _ 58 CD21 CD21 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 10459 # text = By comparing the expression of genes controlling apoptosis, including those encoding several members of the BCL-2 family of proteins, the known relative resistance of EBV-immortalized B-cell lines to apoptosis induced by low serum was found to correlate with expression of both BCL-2 and A20. 1 By by SCONJ IN _ _ _ _ _ 2 comparing compare VERB VBG VerbForm=Ger _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 genes gene NOUN NNS Number=Plur _ _ _ _ 7 controlling controlle VERB VBG VerbForm=Ger _ _ _ _ 8 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 including include VERB VBG VerbForm=Ger _ _ _ _ 11 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 12 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 13 several several ADJ JJ Degree=Pos _ _ _ _ 14 members member NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 BCL BCL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ _ 20 family family NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 relative relative ADJ JJ Degree=Pos _ _ _ _ 27 resistance resistance NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 immortalized immortalize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 lines line NOUN NNS Number=Plur _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 apoptosis apoptosis DET DT Number=Sing|PronType=Dem _ _ _ _ 38 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 by by ADP IN _ _ _ _ _ 40 low low ADJ JJ Degree=Pos _ _ _ _ 41 serum serum NOUN NN Number=Sing _ _ _ _ 42 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 43 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 44 to to PART TO _ _ _ _ _ 45 correlate correlate VERB VB VerbForm=Inf _ _ _ _ 46 with with ADP IN _ _ _ _ _ 47 expression expression NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 both both DET DT _ _ _ _ _ 50 BCL Bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 2 2 NUM CD NumType=Card _ _ _ _ 53 and and CCONJ CC _ _ _ _ _ 54 A20 A20 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 10460 # text = A20 can be regulated by the NF-kappaB transcription factor, which is known to be activated by the EBV LMP-1 protein. 1 A20 A20 NOUN NN Number=Sing _ _ _ _ 2 can can AUX MD VerbForm=Fin _ _ _ _ 3 be be AUX VB VerbForm=Inf _ _ _ _ 4 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 EBV EBV PROPN NNP Number=Sing _ _ _ _ 22 LMP LMP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 10461 # text = Quantitative assays demonstrated a direct temporal relationship between LMP-1 protein levels and active NF-kappaB during the time course of infection. 1 Quantitative Quantitative ADJ JJ Degree=Pos _ _ _ _ 2 assays assay NOUN NNS Number=Plur _ _ _ _ 3 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 direct direct ADJ JJ Degree=Pos _ _ _ _ 6 temporal temporal ADJ JJ Degree=Pos _ _ _ _ 7 relationship relationship NOUN NN Number=Sing _ _ _ _ 8 between between ADP IN _ _ _ _ _ 9 LMP LMP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 levels level NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 active active ADJ JJ Degree=Pos _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 19 during during ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 time time NOUN NN Number=Sing _ _ _ _ 22 course course NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10462 # text = Document 0030012215 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012215 0030012215 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10463 # text = Induction of immediate early response genes by macrophage colony-stimulating factor in normal human monocytes. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 4 early early ADJ JJ Degree=Pos _ _ _ _ 5 response response NOUN NN Number=Sing _ _ _ _ 6 genes gene NOUN NNS Number=Plur _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 9 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 stimulating stimulate VERB VBG VerbForm=Ger _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 normal normal ADJ JJ Degree=Pos _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10464 # text = A group of coordinately induced protooncogenes, cytoskeletal, and extracellular matrix genes have been termed immediate early response genes, and their induction has been associated with growth factor-stimulated cell proliferation. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 group group NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 coordinately coordinately ADV RB _ _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 protooncogenes protooncogene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 cytoskeletal cytoskeletal NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 12 matrix matrix NOUN NN Number=Sing _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 16 termed term VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 18 early early ADJ JJ Degree=Pos _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 induction induction NOUN NN Number=Sing _ _ _ _ 25 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 27 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 growth growth NOUN NN Number=Sing _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 cell cell NOUN NN Number=Sing _ _ _ _ 34 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 10465 # text = We have investigated the induction of these genes by macrophage-CSF (M-CSF) in human monocytes that do not proliferate in response to M-CSF but require the factor for optimal cell differentiation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 induction induction NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 genes gene NOUN NNS Number=Plur _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 macrophage macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 CSF CSF PROPN NNP Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 M m PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 21 that that PRON WDT PronType=Rel _ _ _ _ 22 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 not not PART RB _ _ _ _ _ 24 proliferate proliferate VERB VB VerbForm=Inf _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 response response NOUN NN Number=Sing _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 M- M- NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 CSF CSF NOUN NN Number=Sing _ _ _ _ 30 but but CCONJ CC _ _ _ _ _ 31 require require VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 factor factor NOUN NN Number=Sing _ _ _ _ 34 for for ADP IN _ _ _ _ _ 35 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 36 cell cell NOUN NN Number=Sing _ _ _ _ 37 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 10466 # text = Normal human monocytes were isolated, carefully washed, and incubated for 36 to 48 h in fetal bovine serum-containing medium. 1 Normal normal ADJ JJ Degree=Pos _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 isolated isolate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 carefully carefully ADV RB _ _ _ _ _ 8 washed wash VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 incubated incubate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 36 36 NUM CD NumType=Card _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 48 48 NUM CD NumType=Card _ _ _ _ 16 h h NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 19 bovine bovine NOUN NN Number=Sing _ _ _ _ 20 serum- serum- PUNCT , _ _ _ _ SpaceAfter=No 21 containing contain VERB VBG VerbForm=Ger _ _ _ _ 22 medium medium NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 10467 # text = At the end of this incubation the resting cells were stimulated with M-CSF, and RNA was isolated for analysis by Northern blotting. 1 At at ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 end end NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 incubation incubation NOUN NN Number=Sing _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 resting resting ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 CSF CSF NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 RNA RNA PROPN NNP Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 isolated isolate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 analysis analysis NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 Northern northern ADJ JJ Degree=Pos _ _ _ _ 25 blotting blotting NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 10468 # text = RNA from control resting cells contained low to undetectable levels of c-jun, fibronectin receptor, and actin mRNA. 1 RNA RNa ADP IN _ _ _ _ _ 2 from from ADP IN _ _ _ _ _ 3 control control NOUN NN Number=Sing _ _ _ _ 4 resting reste VERB VBG VerbForm=Ger _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 low low ADV RB Degree=Pos _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 undetectable undetectable ADJ JJ Degree=Pos _ _ _ _ 10 levels level NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 c- c- SYM NFP _ _ _ _ SpaceAfter=No 13 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 fibronectin fibronectin NOUN NN Number=Sing _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 actin actin PROPN NNP Number=Sing _ _ _ _ 20 mRNA mRNa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 10469 # text = Within 15 to 30 min of addition of M-CSF, however, there was a dramatic coordinate induction of these genes. 1 Within within ADP IN _ _ _ _ _ 2 15 15 NUM CD NumType=Card _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 30 30 NUM CD NumType=Card _ _ _ _ 5 min min NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 addition addition NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 CSF CSF NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 however however ADV RB _ _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 there there PRON EX _ _ _ _ _ 16 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 dramatic dramatic ADJ JJ Degree=Pos _ _ _ _ 19 coordinate coordinate NOUN NN Number=Sing _ _ _ _ 20 induction induction NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 23 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 10470 # text = The c-jun gene expression was very transient and was not detectable by 60 min after M-CSF addition. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 c- c- SYM NFP _ _ _ _ SpaceAfter=No 3 jun jun NOUN NN Number=Sing _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 very very ADV RB _ _ _ _ _ 8 transient transient ADJ JJ Degree=Pos _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 60 60 NUM CD NumType=Card _ _ _ _ 15 min min NOUN NNS Number=Plur _ _ _ _ 16 after after ADP IN _ _ _ _ _ 17 M- M- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 CSF CSF NOUN NN Number=Sing _ _ _ _ 19 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 10471 # text = In contrast, the expression of actin and fibronectin receptor mRNA was more sustained, and the expression of these genes remained elevated at 24 to 48 h after M-CSF addition. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 actin actin NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 fibronectin fibronectin NOUN NN Number=Sing _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 more more ADV RBR _ _ _ _ _ 14 sustained sustain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ _ 22 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 at at ADP IN _ _ _ _ _ 25 24 24 NUM CD NumType=Card _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 48 48 NUM CD NumType=Card _ _ _ _ 28 h h NOUN NN Number=Sing _ _ _ _ 29 after after ADP IN _ _ _ _ _ 30 M- M- NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 CSF CSF NOUN NN Number=Sing _ _ _ _ 32 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 10472 # text = We also observed the induction of the myelomonocytic specific tyrosine kinase hck gene simultaneously with the other immediate early response genes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 induction induction NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 myelomonocytic myelomonocytic ADJ JJ Degree=Pos _ _ _ _ 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 hck hck NOUN NN Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 simultaneously simultaneously ADV RB _ _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 other other ADJ JJ Degree=Pos _ _ _ _ 18 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 19 early early ADJ JJ Degree=Pos _ _ _ _ 20 response response NOUN NN Number=Sing _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10473 # text = The protein synthesis inhibitor cycloheximide did not block the induction of any of these genes, and in fact, super-induced the expression of c-jun and hck. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 4 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 5 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ _ 6 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 block block VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 any any DET DT _ _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 fact fact NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 super super ADV RB _ _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 c- c- SYM NFP _ _ _ _ SpaceAfter=No 28 jun jun NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 hck hck NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 10474 # text = Nuclear run on transcription of the c-jun, hck, and actin genes. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 run run NOUN NN Number=Sing _ _ _ _ 3 on on ADP IN _ _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 c- c- SYM NFP _ _ _ _ SpaceAfter=No 8 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 hck hck NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 actin actin ADJ JJ Degree=Pos _ _ _ _ 14 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 10475 # text = Therefore, in normal human monocytes M-CSF induces immediate early response genes without inducing cell proliferation. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 normal normal ADJ JJ Degree=Pos _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 7 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 CSF Csf NOUN NN Number=Sing _ _ _ _ 10 induces induce NOUN NNS Number=Plur _ _ _ _ 11 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 12 early early ADJ JJ Degree=Pos _ _ _ _ 13 response response NOUN NN Number=Sing _ _ _ _ 14 genes gene NOUN NNS Number=Plur _ _ _ _ 15 without without SCONJ IN _ _ _ _ _ 16 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 10476 # text = These genes may then play a role in altering the physiologic status of the cells in response to CSF. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 genes gene NOUN NNS Number=Plur _ _ _ _ 3 may may AUX MD VerbForm=Fin _ _ _ _ 4 then then ADV RB PronType=Dem _ _ _ _ 5 play play VERB VB VerbForm=Inf _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 in in SCONJ IN _ _ _ _ _ 9 altering alter VERB VBG VerbForm=Ger _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 physiologic physiologic NOUN NN Number=Sing _ _ _ _ 12 status status NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 response response NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10477 # text = Document 0030012216 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012216 0030012216 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10478 # text = An active v-abl protein tyrosine kinase blocks immunoglobulin light-chain gene rearrangement. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 active active ADJ JJ Degree=Pos _ _ _ _ 3 v- v- PUNCT , _ _ _ _ SpaceAfter=No 4 abl abl ADJ JJ Degree=Pos _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 blocks block NOUN NNS Number=Plur _ _ _ _ 9 immunoglobulin immunoglobulin ADP IN _ _ _ _ _ 10 light light NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 -chain -chain NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 rearrangement rearrangement NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10479 # text = Lymphoid cells transformed by Abelson murine leukemia virus have provided one of the classic models for study of early B-cell development and immunoglobulin rearrangement. 1 Lymphoid Lymphoid ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 Abelson Abelson PROPN NNP Number=Sing _ _ _ _ 6 murine murine NOUN NN Number=Sing _ _ _ _ 7 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 8 virus virus NOUN NN Number=Sing _ _ _ _ 9 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 provided provide VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 one one NUM CD NumType=Card _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 classic classic ADJ JJ Degree=Pos _ _ _ _ 15 models model NOUN NNS Number=Plur _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 study study NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 early early ADJ JJ Degree=Pos _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 development development NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 26 rearrangement rearrangement NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 10480 # text = Most of these cells have rearranged their heavy-chain locus but not their light chain genes, suggesting that an active v-abl protein interferes with this differentiation step. 1 Most most ADJ JJS Degree=Sup _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 rearranged rearrange VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 8 heavy heavy ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 chain chain NOUN NN Number=Sing _ _ _ _ 11 locus locus NOUN NN Number=Sing _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 not not ADV RB _ _ _ _ _ 14 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 light light NOUN NN Number=Sing _ _ _ _ 16 chain chain NOUN NN Number=Sing _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 active active ADJ JJ Degree=Pos _ _ _ _ 23 v- v- PUNCT , _ _ _ _ SpaceAfter=No 24 abl abl ADJ JJ Degree=Pos _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ _ 26 interferes interfere VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 29 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 30 step step NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 10481 # text = To test this hypothesis, light-chain gene structure was examined in pre-B cells transformed by temperature-sensitive mutants of the Abelson virus and in derivatives that survive at the nonpermissive temperature because they express a human BCL-2 gene. 1 To to PART TO _ _ _ _ _ 2 test test VERB VB VerbForm=Inf _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 hypothesis hypothesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 light light NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 chain chain NOUN NN Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 structure structure NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 pre pre X AFX _ _ _ _ SpaceAfter=No 15 -B -b ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 temperature temperature NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 22 mutants mutant NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 Abelson Abelson PROPN NNP Number=Sing _ _ _ _ 26 virus virus NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 derivatives derivative NOUN NNS Number=Plur _ _ _ _ 30 that that PRON WDT PronType=Rel _ _ _ _ 31 survive survive VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 32 at at ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 nonpermissive nonpermissive ADJ JJ Degree=Pos _ _ _ _ 35 temperature temperature NOUN NN Number=Sing _ _ _ _ 36 because because SCONJ IN _ _ _ _ _ 37 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 38 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 human human ADJ JJ Degree=Pos _ _ _ _ 41 BCL Bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 2 2 NUM CD NumType=Card _ _ _ _ 44 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 10482 # text = Our studies reveal that inactivation of the v-abl protein tyrosine kinase triggers high-frequency rearrangement of kappa and lambda light-chain genes. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 studies study VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 reveal reveal ADJ JJ Degree=Pos _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 inactivation inactivation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 v- v- SYM SYM _ _ _ _ SpaceAfter=No 9 abl abl ADJ JJ Degree=Pos _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 12 kinase kinase NOUN NN Number=Sing _ _ _ _ 13 triggers trigger NOUN NNS Number=Plur _ _ _ _ 14 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 -frequency -frequency NOUN NN Number=Sing _ _ _ _ 16 rearrangement rearrangement NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 lambda lambda NOUN NN Number=Sing _ _ _ _ 21 light light NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 chain chain NOUN NN Number=Sing _ _ _ _ 24 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 10483 # text = These events are accompanied by marked increases in the expression of RAG-1 and RAG-2 RNAs. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 events event NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 increases increase NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 RAG RAG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 RAG rag NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 RNAs RNA NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 10484 # text = These increases occur in the absence of protein synthesis but are dependent on inactivation of the v-abl protein tyrosine kinase. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 increases increase NOUN NNS Number=Plur _ _ _ _ 3 occur occur VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 absence absence NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 10 but but CCONJ CC _ _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 inactivation inactivation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 v- v- SYM SYM _ _ _ _ SpaceAfter=No 18 abl abl ADJ JJ Degree=Pos _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 21 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10485 # text = As documented in the accompanying paper (Klug et al., this issue), an active v-abl protein also suppresses the activity of NF-kappa B/rel and expression controlled by the kappa intron enhancer. 1 As as SCONJ IN _ _ _ _ _ 2 documented document VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 accompanying accompanying NOUN NN Number=Sing _ _ _ _ 6 paper paper NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 Klug Klug X ADD _ _ _ _ _ 9 et et X FW _ _ _ _ _ 10 al. al. X FW _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 13 issue issue NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 active active ADJ JJ Degree=Pos _ _ _ _ 18 v- v- PUNCT , _ _ _ _ SpaceAfter=No 19 abl abl ADJ JJ Degree=Pos _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 also also ADV RB _ _ _ _ _ 22 suppresses suppress VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 / / PUNCT , _ _ _ _ SpaceAfter=No 31 rel rel NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 expression expression NOUN NN Number=Sing _ _ _ _ 34 controlled control VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 kappa kappa NOUN NN Number=Sing _ _ _ _ 38 intron intron ADP IN _ _ _ _ _ 39 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 10486 # text = Together these data demonstrate that the v-abl protein specifically interferes with light-chain gene rearrangement by suppressing at least two pathways essential for this stage of B-cell differentiation and suggest that tyrosine phosphorylation is important in regulating RAG gene expression. 1 Together together SCONJ IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 data data NOUN NN Number=Sing _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 v- v- SYM NFP _ _ _ _ SpaceAfter=No 8 abl abl ADJ JJ Degree=Pos _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 specifically specifically ADV RB _ _ _ _ _ 11 interferes interfere VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 light light NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 chain chain NOUN NN Number=Sing _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 rearrangement rearrangement NOUN NN Number=Sing _ _ _ _ 18 by by SCONJ IN _ _ _ _ _ 19 suppressing suppresse VERB VBG VerbForm=Ger _ _ _ _ 20 at at ADV RB _ _ _ _ _ 21 least least ADV RBS Degree=Sup _ _ _ _ 22 two two NUM CD NumType=Card _ _ _ _ 23 pathways pathway NOUN NNS Number=Plur _ _ _ _ 24 essential essential ADJ JJ Degree=Pos _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 27 stage stage NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 35 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 36 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 37 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 important important ADJ JJ Degree=Pos _ _ _ _ 39 in in SCONJ IN _ _ _ _ _ 40 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 41 RAG RAG PROPN NNP Number=Sing _ _ _ _ 42 gene gene NOUN NN Number=Sing _ _ _ _ 43 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10487 # text = Document 0030012219 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012219 0030012219 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10488 # text = Concomitant downregulation of IgH 3' enhancer activity and c-myc expression in a plasmacytoma x fibroblast environment: implications for dysregulation of translocated c-myc. 1 Concomitant Concomitant ADJ JJ Degree=Pos _ _ _ _ 2 downregulation downregulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 IgH Igh PROPN NNP Number=Sing _ _ _ _ 5 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 ' ' PUNCT `` _ _ _ _ _ 7 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 c- c- PUNCT : _ _ _ _ SpaceAfter=No 11 myc myc ADJ JJ Degree=Pos _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 plasmacytoma plasmacytoma NOUN NN Number=Sing _ _ _ _ 16 x x SYM SYM _ _ _ _ _ 17 fibroblast fibroblast NOUN NN Number=Sing _ _ _ _ 18 environment environment NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 : : PUNCT : _ _ _ _ _ 20 implications implication NOUN NNS Number=Plur _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 dysregulation dysregulation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 translocated translocate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 c- c- SYM NFP _ _ _ _ SpaceAfter=No 26 myc myc NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10489 # text = Regulation of immunoglobulin heavy chain (IgH) gene expression is controlled by a B cell-specific promoter, intronic enhancer and additional B cell-specific enhancer elements identified recently in the 3' end of the IgH locus. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 4 heavy heavy ADJ JJ Degree=Pos _ _ _ _ 5 chain chain NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 IgH IgH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 B b PROPN NNP Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 specific specific ADJ JJ Degree=Pos _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 intronic intronic ADJ JJ Degree=Pos _ _ _ _ 22 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 additional additional ADJ JJ Degree=Pos _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 specific specific ADJ JJ Degree=Pos _ _ _ _ 29 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 30 elements element NOUN NNS Number=Plur _ _ _ _ 31 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 recently recently ADV RB _ _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ' ' PUNCT `` _ _ _ _ _ 37 end end NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 IgH Igh PROPN NNP Number=Sing _ _ _ _ 41 locus locus PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 10490 # text = One of the latter elements, the IgH 3' enhancer, is of particular interest: (1) it is B cell-specific and active only in late B cell development; (2) in rodent plasmacytomas and in some human Burkitt's lymphomas it is part of a locus control region (LCR) that is involved in deregulation of the c-myc oncogene as a result of translocation into the IgH locus; and (3) it has been implicated in the mechanisms that control 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 latter latter ADJ JJ Degree=Pos _ _ _ _ 5 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 IgH Igh PROPN NNP Number=Sing _ _ _ _ 9 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ' ' PUNCT '' _ _ _ _ _ 11 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 particular particular ADJ JJ Degree=Pos _ _ _ _ 16 interest interest NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 : : PUNCT : _ _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 1 1 X LS _ _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 B b PROPN NNP Number=Sing _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 specific specific ADJ JJ Degree=Pos _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 active active ADJ JJ Degree=Pos _ _ _ _ 29 only only ADV RB _ _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 late late ADJ JJ Degree=Pos _ _ _ _ 32 B b NOUN NN Number=Sing _ _ _ _ 33 cell cell NOUN NN Number=Sing _ _ _ _ 34 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ; ; PUNCT , _ _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 2 2 X LS _ _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 rodent rodent ADJ JJ Degree=Pos _ _ _ _ 41 plasmacytomas plasmacytoma NOUN NNS Number=Plur _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 some some DET DT _ _ _ _ _ 45 human human ADJ JJ Degree=Pos _ _ _ _ 46 Burkitt Burkitt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 's 's PART POS _ _ _ _ _ 48 lymphomas lymphoma NOUN NNS Number=Plur _ _ _ _ 49 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 50 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 51 part part NOUN NN Number=Sing _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 54 locus locus ADJ JJ Degree=Pos _ _ _ _ 55 control control NOUN NN Number=Sing _ _ _ _ 56 region region NOUN NN Number=Sing _ _ _ _ 57 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 58 LCR LCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 59 ) ) PUNCT -RRB- _ _ _ _ _ 60 that that PRON WDT PronType=Rel _ _ _ _ 61 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 62 involved involved ADJ JJ Degree=Pos _ _ _ _ 63 in in ADP IN _ _ _ _ _ 64 deregulation deregulation NOUN NN Number=Sing _ _ _ _ 65 of of ADP IN _ _ _ _ _ 66 the the DET DT Definite=Def|PronType=Art _ _ _ _ 67 c- c- SYM NFP _ _ _ _ SpaceAfter=No 68 myc myc ADJ JJ Degree=Pos _ _ _ _ 69 oncogene oncogene NOUN NN Number=Sing _ _ _ _ 70 as as ADP IN _ _ _ _ _ 71 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 72 result result NOUN NN Number=Sing _ _ _ _ 73 of of ADP IN _ _ _ _ _ 74 translocation translocation NOUN NN Number=Sing _ _ _ _ 75 into into ADP IN _ _ _ _ _ 76 the the DET DT Definite=Def|PronType=Art _ _ _ _ 77 IgH Igh PROPN NNP Number=Sing _ _ _ _ 78 locus locus NOUN NN Number=Sing _ _ _ SpaceAfter=No 79 ; ; PUNCT , _ _ _ _ _ 80 and and CCONJ CC _ _ _ _ _ 81 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 82 3 3 X LS _ _ _ _ SpaceAfter=No 83 ) ) PUNCT -RRB- _ _ _ _ _ 84 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 85 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 86 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 87 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 88 in in ADP IN _ _ _ _ _ 89 the the DET DT Definite=Def|PronType=Art _ _ _ _ 90 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 91 that that PRON WDT PronType=Rel _ _ _ _ 92 control control VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ # sent_id = 10491 # text = Ig gene class switch recombination. 1 Ig ig ADJ JJ Degree=Pos _ _ _ _ 2 gene gene ADJ JJ Degree=Pos _ _ _ _ 3 class class NOUN NN Number=Sing _ _ _ _ 4 switch switch NOUN NN Number=Sing _ _ _ _ 5 recombination recombination NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 . . PUNCT . _ _ _ _ _ # sent_id = 10492 # text = We have used a somatic cell hybridization approach to genetically analyse regulation of the activity of the IgH 3' enhancer. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 somatic somatic ADJ JJ Degree=Pos _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 hybridization hybridization NOUN NN Number=Sing _ _ _ _ 8 approach approach NOUN NN Number=Sing _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 genetically genetically ADV RB _ _ _ _ _ 11 analyse analyse VERB VB VerbForm=Inf _ _ _ _ 12 regulation regulation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 IgH IgH PROPN NNP Number=Sing _ _ _ _ 19 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ' ' PUNCT '' _ _ _ _ _ 21 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10493 # text = When mouse MPC11 plasmacytoma cells, in which the IgH 3' enhancer is active, are fused with fibroblasts, Ig expression is extinguished at the level of transcription. 1 When when ADV WRB PronType=Int _ _ _ _ 2 mouse mouse NOUN NN Number=Sing _ _ _ _ 3 MPC MPC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 11 11 NUM CD NumType=Card _ _ _ _ 5 plasmacytoma plasmacytoma NOUN NN Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 which which PRON WDT PronType=Rel _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 IgH Igh NOUN NN Number=Sing _ _ _ _ 12 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ' ' PUNCT `` _ _ _ _ _ 14 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 active active ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 fused fuse VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 Ig ig PROPN NNP Number=Sing _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 extinguished extinguish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 at at ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 level level NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 10494 # text = Here we show that in a MPC11 plasmacytoma x fibroblast environment, the IgH 3' enhancer is transcriptionally inactive. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 MPC MPC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 11 11 NUM CD NumType=Card _ _ _ _ 9 plasmacytoma plasmacytoma NOUN NN Number=Sing _ _ _ _ 10 x x SYM SYM _ _ _ _ _ 11 fibroblast fibroblast ADJ JJ Degree=Pos _ _ _ _ 12 environment environment NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 IgH Igh PROPN NNP Number=Sing _ _ _ _ 16 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ' ' PUNCT '' _ _ _ _ _ 18 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 transcriptionally transcriptionally ADV RB _ _ _ _ _ 21 inactive inactive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10495 # text = Furthermore, we demonstrate that binding of several B cell-specific transcription factors, essential for IgH 3' enhancer activity, is lacking, which may explain 3' enhancer inactivity, although the binding of repressors cannot be excluded. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 binding binding VERB VBG VerbForm=Ger _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 several several ADJ JJ Degree=Pos _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 essential essential ADJ JJ Degree=Pos _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 IgH Igh PROPN NNP Number=Sing _ _ _ _ 19 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ' ' PUNCT `` _ _ _ _ _ 21 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 lacking lack VERB VBG Tense=Pres|VerbForm=Part _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 which which PRON WDT PronType=Rel _ _ _ _ 28 may may AUX MD VerbForm=Fin _ _ _ _ 29 explain explain VERB VB VerbForm=Inf _ _ _ _ 30 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ' ' PUNCT `` _ _ _ _ _ 32 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 33 inactivity inactivity NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 although although SCONJ IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 binding binding NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 repressors repressor NOUN NNS Number=Plur _ _ _ _ 40 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 41 not not PART RB _ _ _ _ _ 42 be be AUX VB VerbForm=Inf _ _ _ _ 43 excluded exclude VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 10496 # text = Moreover, the high expression level of c-myc, characteristic of the parental MPC11 cells carrying the t(12;15) translocation, is down-regulated in the hybrids to that in unfused fibroblasts. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 high high ADJ JJ Degree=Pos _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 level level NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 c- c- PUNCT : _ _ _ _ SpaceAfter=No 9 myc myc NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 characteristic characteristic NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 parental parental ADJ JJ Degree=Pos _ _ _ _ 15 MPC11 Mpc11 NUM CD NumType=Card _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 t t NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 12;15 12;15 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 translocation translocation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 down down ADV RB _ _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 hybrids hybrid NOUN NNS Number=Plur _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 unfused unfused ADJ JJ Degree=Pos _ _ _ _ 36 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 10497 # text = Therefore, inactivation of the IgH 3' enhancer is a multifactorial process affecting several transcription factors that control the cell-specific and developmental activity of the enhancer. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 inactivation inactivation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 IgH Igh PROPN NNP Number=Sing _ _ _ _ 7 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ' ' PUNCT '' _ _ _ _ _ 9 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 multifactorial multifactorial ADJ JJ Degree=Pos _ _ _ _ 13 process process NOUN NN Number=Sing _ _ _ _ 14 affecting affect VERB VBG VerbForm=Ger _ _ _ _ 15 several several ADJ JJ Degree=Pos _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factors factor NOUN NNS Number=Plur _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 control control VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 specific specific ADJ JJ Degree=Pos _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 26 activity activity NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10498 # text = Document 0030012224 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012224 0030012224 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10499 # text = Sp1 is a critical factor for the monocytic specific expression of human CD14. 1 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 critical critical ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 CD14 CD14 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10500 # text = CD14 is a membrane glycoprotein expressed specifically on monocytes and macrophages, and its expression is markedly increased during the process of monocyte differentiation. 1 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 14 14 NUM CD NumType=Card _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 membrane membrane NOUN NN Number=Sing _ _ _ _ 6 glycoprotein glycoprotein NOUN NN Number=Sing _ _ _ _ 7 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 specifically specifically ADV RB _ _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 16 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 markedly markedly ADV RB _ _ _ _ _ 20 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 during during ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 process process NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 monocyte monocyte ADJ JJ Degree=Pos _ _ _ _ 26 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 10501 # text = In order to study CD14 gene regulation, the human CD14 gene was cloned from a partial EcoRI digested chromosome 5 library. 1 In in ADP IN _ _ _ _ _ 2 order order NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 study study VERB VB VerbForm=Inf _ _ _ _ 5 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 14 14 NUM CD NumType=Card _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 14 14 NUM CD NumType=Card _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 cloned clon VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 partial partial ADJ JJ Degree=Pos _ _ _ _ 20 EcoRI Ecori PROPN NNP Number=Sing _ _ _ _ 21 digested digest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 chromosome chromosome DET DT _ _ _ _ _ 23 5 5 NUM CD NumType=Card _ _ _ _ 24 library library NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 10502 # text = A 5.5-kilobase genomic clone contained the full-length CD14 coding sequence and 4.2 kilobases of 5'-upstream sequence. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 5.5 5.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kilobase kilobase NOUN NN Number=Sing _ _ _ _ 5 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 6 clone clone NOUN NN Number=Sing _ _ _ _ 7 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 full full ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 length length NOUN NN Number=Sing _ _ _ _ 12 CD14 Cd14 NOUN NN Number=Sing _ _ _ _ 13 coding coding NOUN NN Number=Sing _ _ _ _ 14 sequence sequence NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 4.2 4.2 NUM CD NumType=Card _ _ _ _ 17 kilobases kilobase NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ' ' NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 - - SYM SYM _ _ _ _ SpaceAfter=No 22 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 23 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 10503 # text = One major and one minor transcription start site were identified 101 and 130 base pairs (bp) upstream, respectively, from the protein translation start ATG. 1 One one NUM CD NumType=Card _ _ _ _ 2 major major ADJ JJ Degree=Pos _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 one one NUM CD NumType=Card _ _ _ _ 5 minor minor ADJ JJ Degree=Pos _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 start start NOUN NN Number=Sing _ _ _ _ 8 site site NOUN NN Number=Sing _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 101 101 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 130 130 NUM CD NumType=Card _ _ _ _ 14 base base NOUN NN Number=Sing _ _ _ _ 15 pairs pair NOUN NNS Number=Plur _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 bp bp NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 upstream upstream NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ _ 26 translation translation NOUN NN Number=Sing _ _ _ _ 27 start start NOUN NN Number=Sing _ _ _ _ 28 ATG ATG ADV RB _ _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 10504 # text = A DNA fragment containing 128 bp of upstream sequence had strong, monocyte-specific promoter activity in the CD14 positive monocytic cell line Mono Mac 6 as compared to the nonmonocytic cell lines HeLa and REX. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ _ 3 fragment fragment NOUN NN Number=Sing _ _ _ _ 4 containing contain VERB VBG VerbForm=Ger _ _ _ _ 5 128 128 NUM CD NumType=Card _ _ _ _ 6 bp bp NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 9 sequence sequence NOUN NN Number=Sing _ _ _ _ 10 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 strong strong ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 monocyte-specific monocyte-specific ADJ JJ Degree=Pos _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 14 14 NUM CD NumType=Card _ _ _ _ 20 positive positive ADJ JJ Degree=Pos _ _ _ _ 21 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 line line NOUN NN Number=Sing _ _ _ _ 24 Mono Mono PROPN NNP Number=Sing _ _ _ _ 25 Mac Mac PROPN NNP Number=Sing _ _ _ _ 26 6 6 NUM CD NumType=Card _ _ _ _ 27 as as ADP IN _ _ _ _ _ 28 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 nonmonocytic nonmonocytic ADJ JJ Degree=Pos _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 lines line NOUN NNS Number=Plur _ _ _ _ 34 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 REX REX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 10505 # text = Four regions in this DNA fragment interact with nuclear proteins isolated from monocytic cells. 1 Four four NUM CD NumType=Card _ _ _ _ 2 regions region NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 DNA dna NOUN NN Number=Sing _ _ _ _ 6 fragment fragment NOUN NN Number=Sing _ _ _ _ 7 interact interact NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ _ 11 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 10506 # text = The Sp1 transcription factor bound to three different regions in the CD14 promoter. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Sp1 sp1 NUM CD NumType=Card _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 bound bound ADJ JJ Degree=Pos _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 three three NUM CD NumType=Card _ _ _ _ 8 different different ADJ JJ Degree=Pos _ _ _ _ 9 regions region NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 14 14 NUM CD NumType=Card _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 10507 # text = Mutation of the major Sp1 binding site (-110 bp) decreased tissue-specific promoter activity, and these results, together with transactivation experiments, demonstrate that Sp1 plays a critical role in the tissue-specific expression of CD14 in monocytic cells. 1 Mutation Mutation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 major major ADJ JJ Degree=Pos _ _ _ _ 5 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 site site NOUN NN Number=Sing _ _ _ _ 8 (- (- PUNCT . _ _ _ _ SpaceAfter=No 9 110 110 NUM CD NumType=Card _ _ _ _ 10 bp bp NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 tissue- tissue- SYM SYM _ _ _ _ SpaceAfter=No 14 specific specific ADJ JJ Degree=Pos _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 20 results result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 together together ADV RB _ _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 25 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 that that SCONJ IN _ _ _ _ _ 29 Sp1 sp1 PROPN NNP Number=Sing _ _ _ _ 30 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 critical critical ADJ JJ Degree=Pos _ _ _ _ 33 role role NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 specific specific ADJ JJ Degree=Pos _ _ _ _ 39 expression expression NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 CD14 CD14 PROPN NNP Number=Sing _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 10508 # text = CD14 Sp1 site oligonucleotides bound preferentially to a 105-kDa Sp1 species, which is present in higher relative levels in monocytic than non-monocytic cells, suggesting that modification of Sp1, such as phosphorylation, may explain how the Sp1 site mediates monocytic specific promoter activity. 1 CD14 CD14 NUM CD NumType=Card _ _ _ _ 2 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 3 site site NOUN NN Number=Sing _ _ _ _ 4 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 5 bound bound VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 preferentially preferentially ADV RB _ _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 105 105 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kDa kDa NOUN NN Number=Sing _ _ _ _ 12 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 13 species species NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 present present ADJ JJ Degree=Pos _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 higher higher ADJ JJR Degree=Cmp _ _ _ _ 20 relative relative ADJ JJ Degree=Pos _ _ _ _ 21 levels level NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 24 than than ADP IN _ _ _ _ _ 25 non-monocytic non-monocytic ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 29 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 30 modification modification NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 such such ADJ JJ Degree=Pos _ _ _ _ 35 as as ADP IN _ _ _ _ _ 36 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 may may AUX MD VerbForm=Fin _ _ _ _ 39 explain explain VERB VB VerbForm=Inf _ _ _ _ 40 how how ADV WRB PronType=Int _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 43 site site NOUN NN Number=Sing _ _ _ _ 44 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 45 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 46 specific specific ADJ JJ Degree=Pos _ _ _ _ 47 promoter promoter NOUN NN Number=Sing _ _ _ _ 48 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10509 # text = Document 0030012226 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012226 0030012226 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10510 # text = Redox signals and NF-kappaB activation in T cells. 1 Redox Redox VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 signals signal NOUN NNS Number=Plur _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10511 # text = Accumulating data from a number of laboratories have recently indicated that the response of transcription factor NF-kappaB to alterations in the redox homeostasis of cells may play an important role in modulating immune function. 1 Accumulating accumulate VERB VBG VerbForm=Ger _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 number number NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 laboratories laboratory NOUN NNS Number=Plur _ _ _ _ 8 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 recently recently ADV RB _ _ _ _ _ 10 indicated indicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 response response NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 alterations alteration NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 redox redox NOUN NN Number=Sing _ _ _ _ 25 homeostasis homeostasis NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 may may AUX MD VerbForm=Fin _ _ _ _ 29 play play VERB VB VerbForm=Inf _ _ _ _ 30 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 important important ADJ JJ Degree=Pos _ _ _ _ 32 role role NOUN NN Number=Sing _ _ _ _ 33 in in SCONJ IN _ _ _ _ _ 34 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 35 immune immune ADJ JJ Degree=Pos _ _ _ _ 36 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 10512 # text = The activation of NF-kappaB has been recognized to regulate a number of genes necessary for normal T cell responses including IL-2, IL-6, IL-8, and several T cell surface receptors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 9 recognized recognize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 number number NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ _ 16 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 normal normal ADJ JJ Degree=Pos _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 responses response NOUN NNS Number=Plur _ _ _ _ 22 including include VERB VBG VerbForm=Ger _ _ _ _ 23 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 IL il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 -6 -6 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 several several ADJ JJ Degree=Pos _ _ _ _ 36 T t PROPN NNP Number=Sing _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 surface surface NOUN NN Number=Sing _ _ _ _ 39 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 10513 # text = Diminished NF-kappaB activity has been shown to occur in T cells with aging, suggesting that impaired activation of NF-kappaB might occur during cellular senescence. 1 Diminished Diminish PROPN NNP Number=Sing _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 occur occur VERB VB VerbForm=Inf _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 aging ag NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 impaired impaire ADJ JJ Degree=Pos _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 25 might might AUX MD VerbForm=Fin _ _ _ _ 26 occur occur VERB VB VerbForm=Inf _ _ _ _ 27 during during ADP IN _ _ _ _ _ 28 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 29 senescence senescence NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 10514 # text = In addition, aberrancies in NF-kappaB activity have been implicated in the immunopathogenesis of diseases involving immune or inflammatory processes such as atherosclerosis and HIV-1 infection. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 aberrancies aberrancy NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 12 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 immunopathogenesis immunopathogenesis NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 diseases disease NOUN NNS Number=Plur _ _ _ _ 18 involving involve VERB VBG VerbForm=Ger _ _ _ _ 19 immune immune ADJ JJ Degree=Pos _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 22 processes process NOUN NNS Number=Plur _ _ _ _ 23 such such ADJ JJ Degree=Pos _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 atherosclerosis atherosclerosis NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 10515 # text = The role of H2O2 and other reactive oxygen species (ROS) as an integratory secondary messenger for divergent T cell signals has been complicated by the fact that various T cell lines and peripheral blood T cells differ markedly in the levels of NF-kappaB activation induced by oxidant stress. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 H2 H2 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 O2 O2 NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 other other ADJ JJ Degree=Pos _ _ _ _ 8 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 9 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 10 species species NOUN NNS Number=Plur _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 ROS ROS X ADD _ _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 integratory integratory ADJ JJ Degree=Pos _ _ _ _ 17 secondary secondary ADJ JJ Degree=Pos _ _ _ _ 18 messenger messenger NOUN NN Number=Sing _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 divergent divergent ADJ JJ Degree=Pos _ _ _ _ 21 T T PROPN NNP Number=Sing _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 signals signal NOUN NNS Number=Plur _ _ _ _ 24 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 26 complicated complicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 fact fact NOUN NN Number=Sing _ _ _ _ 30 that that SCONJ IN _ _ _ _ _ 31 various various ADJ JJ Degree=Pos _ _ _ _ 32 T t PROPN NNP Number=Sing _ _ _ _ 33 cell cell NOUN NN Number=Sing _ _ _ _ 34 lines line NOUN NNS Number=Plur _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 37 blood blood NOUN NN Number=Sing _ _ _ _ 38 T t PROPN NNP Number=Sing _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ _ 40 differ differ VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 41 markedly markedly ADV RB _ _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 levels level NOUN NNS Number=Plur _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 49 activation activation NOUN NN Number=Sing _ _ _ _ 50 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 51 by by ADP IN _ _ _ _ _ 52 oxidant oxidant ADJ JJ Degree=Pos _ _ _ _ 53 stress stress NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 10516 # text = Additionally, proposed pathways of NF-kappaB activation have been based on indirect evidence provided by experiments which used antioxidants to inhibit active NF-kappaB formation. 1 Additionally additionally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 proposed propose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 pathways pathway NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 12 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 indirect indirect ADJ JJ Degree=Pos _ _ _ _ 15 evidence evidence NOUN NN Number=Sing _ _ _ _ 16 provided provide VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 experiments experiment NOUN NNS Number=Plur _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 24 active active ADJ JJ Degree=Pos _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 28 formation formation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 10517 # text = Further, complete activation of T cells requires at least two signals, one that stimulates an increase in intracellular calcium and one that stimulates enzymatic processes including kinases. 1 Further further ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 complete complete ADJ JJ Degree=Pos _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 at at ADV RB _ _ _ _ _ 10 least least ADV RBS Degree=Sup _ _ _ _ 11 two two NUM CD NumType=Card _ _ _ _ 12 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 one one NUM CD NumType=Card _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 increase increase NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 21 calcium calcium NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 one one NUM CD NumType=Card _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 enzymatic enzymatic ADJ JJ Degree=Pos _ _ _ _ 27 processes process NOUN NNS Number=Plur _ _ _ _ 28 including include VERB VBG VerbForm=Ger _ _ _ _ 29 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 10518 # text = Similarly, substantial evidence indicates that full activation of NF-kappaB requires dual signals. 1 Similarly similarly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 substantial substantial ADJ JJ Degree=Pos _ _ _ _ 4 evidence evidence NOUN NN Number=Sing _ _ _ _ 5 indicates indicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 full full ADJ JJ Degree=Pos _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 dual dual ADJ JJ Degree=Pos _ _ _ _ 15 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 10519 # text = The ability of H2O2 or other ROS to induce T cell signals and functional responses by these two mechanisms is reviewed and the specific response of NF-kappaB to redox changes in T cells is examined. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ability ability NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 H2O2 H2O2 NUM CD NumType=Card _ _ _ _ 5 or or CCONJ CC _ _ _ _ _ 6 other other ADJ JJ Degree=Pos _ _ _ _ 7 ROS Ro NOUN NNS Number=Plur _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 induce induce VERB VB VerbForm=Inf _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 signals signal NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 functional functional ADJ JJ Degree=Pos _ _ _ _ 15 responses response NOUN NNS Number=Plur _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 18 two two NUM CD NumType=Card _ _ _ _ 19 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 reviewed review VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 response response NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 30 to to PART TO _ _ _ _ _ 31 redox redox VERB VB VerbForm=Inf _ _ _ _ 32 changes change NOUN NNS Number=Plur _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 T t PROPN NNP Number=Sing _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ _ 36 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 10520 # text = Data are also presented to suggest that the redox regulation in NF-kappaB activation may be relevant to immune-related diseases and to aging. 1 Data data NOUN NN Number=Sing _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 presented present VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 redox redox NOUN NN Number=Sing _ _ _ _ 10 regulation regulation NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 may may AUX MD VerbForm=Fin _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 immune immune VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 related related ADJ JJ Degree=Pos _ _ _ _ 23 diseases diseasis NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 to to SCONJ IN _ _ _ _ _ 26 aging ag VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10521 # text = Document 0030012227 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012227 0030012227 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10522 # text = PGG-glucan, a soluble beta-(1,3)-glucan, enhances the oxidative burst response, microbicidal activity, and activates an NF-kappa B-like factor in human PMN: evidence for a glycosphingolipid beta-(1,3)-glucan receptor. 1 PGG- PGG- SYM NFP _ _ _ _ SpaceAfter=No 2 glucan glucan PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 6 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 -( -( PUNCT . _ _ _ _ SpaceAfter=No 8 1,3 1,3 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 glucan glucan ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 enhances enhance VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 16 burst burst NOUN NN Number=Sing _ _ _ _ 17 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 microbicidal microbicidal ADJ JJ Degree=Pos _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 like like ADJ JJ Degree=Pos _ _ _ _ 31 factor factor NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 human human ADJ JJ Degree=Pos _ _ _ _ 34 PMN Pmn NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 : : PUNCT : _ _ _ _ _ 36 evidence evidence NOUN NN Number=Sing _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 glycosphingolipid glycosphingolipid ADJ JJ Degree=Pos _ _ _ _ 40 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 -( -( PUNCT . _ _ _ _ SpaceAfter=No 42 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 ,3 ,3 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 glucan glucan ADJ JJ Degree=Pos _ _ _ _ 47 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10523 # text = PGG-Glucan, a soluble beta-(1,6)-branched beta-(1,3)-linked glucose homopolymer derived from the cell wall of the yeast Saccharomyces cerevisiae, is an immunomodulator which enhances leukocyte anti-infective activity and enhances myeloid and megakaryocyte progenitor proliferation. 1 PGG- PGG- SYM NFP _ _ _ _ SpaceAfter=No 2 Glucan Glucan PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 6 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 -( -( PUNCT . _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ,6 ,6 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 - - PUNCT : _ _ _ _ SpaceAfter=No 12 branched branch VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 -( -( PUNCT . _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ,3 ,3 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 glucose glucose DET DT Number=Plur|PronType=Dem _ _ _ _ 21 homopolymer homopolymer NOUN NN Number=Sing _ _ _ _ 22 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 wall wall NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 yeast yeast PROPN NNP Number=Sing _ _ _ _ 30 Saccharomyces Saccharomyces PROPN NNP Number=Sing _ _ _ _ 31 cerevisiae cerevisia NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 immunomodulator immunomodulator NOUN NN Number=Sing _ _ _ _ 36 which which PRON WDT PronType=Rel _ _ _ _ 37 enhances enhance VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 leukocyte leukocyte ADJ JJ Degree=Pos _ _ _ _ 39 anti-infective anti-infective ADJ JJ Degree=Pos _ _ _ _ 40 activity activity NOUN NN Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 enhances enhance NOUN NNS Number=Plur _ _ _ _ 43 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 megakaryocyte megakaryocyte ADJ JJ Degree=Pos _ _ _ _ 46 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 47 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 10524 # text = Incubation of human whole blood with PGG-Glucan significantly enhanced the oxidative burst response of subsequently isolated blood leukocytes to both soluble and particulate activators in a dose-dependent manner, and increased leukocyte microbicidal activity. 1 Incubation incubation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 whole whole ADJ JJ Degree=Pos _ _ _ _ 5 blood blood NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 PGG PGG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Glucan Glucan PROPN NNP Number=Sing _ _ _ _ 10 significantly significantly ADV RB _ _ _ _ _ 11 enhanced enhance VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 14 burst burst NOUN NN Number=Sing _ _ _ _ 15 response response NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 subsequently subsequently ADV RB _ _ _ _ _ 18 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 blood blood NOUN NN Number=Sing _ _ _ _ 20 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 both both CCONJ CC _ _ _ _ _ 23 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 particulate particulate ADJ JJ Degree=Pos _ _ _ _ 26 activators activator NOUN NNS Number=Plur _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 32 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 37 microbicidal microbicidal ADJ JJ Degree=Pos _ _ _ _ 38 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 10525 # text = No evidence for inflammatory cytokine production was obtained under these conditions. 1 No no DET DT _ _ _ _ _ 2 evidence evidence NOUN NN Number=Sing _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 5 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 6 production production NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 obtained obtain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 under under ADP IN _ _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 10526 # text = Electrophoretic mobility shift assays demonstrated that PGG-Glucan induced the activation of an NF-kappaB-like nuclear transcription factor in purified human neutrophils. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assays assays NOUN NNS Number=Plur _ _ _ _ 5 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 PGG PGG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Glucan Glucan PROPN NNP Number=Sing _ _ _ _ 10 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 like like ADP IN _ _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 purified purified ADJ JJ Degree=Pos _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 10527 # text = The binding of 3H-PGG-Glucan to human leukocyte membranes was specific, concentration-dependent, saturable, and high affinity 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 binding binding NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 3H 3H PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 PGG PGG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 Glucan Glucan PROPN NNP Number=Sing _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 human human VERB VB VerbForm=Inf _ _ _ _ 11 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 12 membranes membrane NOUN NNS Number=Plur _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 concentration concentration NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 saturable saturable ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 high high ADJ JJ Degree=Pos _ _ _ _ 24 affinity affinity NOUN NN Number=Sing _ _ _ _ # sent_id = 10528 # text = (Kd approximately 6 nM). 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 Kd K VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 approximately approximately ADV RB _ _ _ _ _ 4 6 6 NUM CD NumType=Card _ _ _ _ 5 nM nm NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ _ # sent_id = 10529 # text = A monoclonal antibody specific to the glycosphingolipid lactosylceramide was able to inhibit activation of the NF-kappaB-like factor by PGG-Glucan, and ligand binding data, including polysaccharide specificity, suggested that the PGG-Glucan binding moiety was lactosylceramide. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 3 antibody antibody NOUN NN Number=Sing _ _ _ _ 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 glycosphingolipid glycosphingolipid ADJ JJ Degree=Pos _ _ _ _ 8 lactosylceramide lactosylceramide NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 able able ADJ JJ Degree=Pos _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 like like ADJ JJ Degree=Pos _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 PGG PGG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 Glucan Glucan PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 ligand ligand NOUN NN Number=Sing _ _ _ _ 29 binding bind VERB VBG VerbForm=Ger _ _ _ _ 30 data data NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 including include VERB VBG VerbForm=Ger _ _ _ _ 33 polysaccharide polysaccharide NOUN NN Number=Sing _ _ _ _ 34 specificity specificity NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 37 that that SCONJ IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 PGG PGG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 Glucan Glucan PROPN NNP Number=Sing _ _ _ _ 42 binding binding VERB VBG VerbForm=Ger _ _ _ _ 43 moiety moiety NOUN NN Number=Sing _ _ _ _ 44 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 45 lactosylceramide lactosylceramide ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 10530 # text = These results indicate that PGG-Glucan enhances neutrophil anti-microbial functions and that interaction between this beta-glucan and human neutrophils is mediated by the glycosphingolipid lactosylceramide present at the cell surface. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 PGG PGG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 Glucan Glucan PROPN NNP Number=Sing _ _ _ _ 8 enhances enhance NOUN NNS Number=Plur _ _ _ _ 9 neutrophil neutrophil ADP IN _ _ _ _ _ 10 anti-microbial anti-microbial ADJ JJ Degree=Pos _ _ _ _ 11 functions function NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 14 interaction interaction NOUN NN Number=Sing _ _ _ _ 15 between between ADP IN _ _ _ _ _ 16 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 17 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 glucan glucan ADJ JJ Degree=Pos _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 glycosphingolipid glycosphingolipid ADJ JJ Degree=Pos _ _ _ _ 28 lactosylceramide lactosylceramide NOUN NN Number=Sing _ _ _ _ 29 present present VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 at at ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 surface surface NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10531 # text = Document 0030012228 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012228 0030012228 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10532 # text = Cloning of the novel human myeloid-cell-specific C/EBP-epsilon transcription factor. 1 Cloning Cloning NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 novel novel NOUN NN Number=Sing _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 myeloid-cell myeloid-cell ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 C C NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 EBP EBP NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10533 # text = Chicken NF-M transcription factor, in cooperation with either c-Myb or v-Myb, is active in the combinatorial activation of myeloid-cell-specific genes in heterologous cell types, such as embryonic fibroblasts. 1 Chicken Chicken PROPN NNP Number=Sing _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 M M NOUN NN Number=Sing _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 cooperation cooperation NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 either either CCONJ CC _ _ _ _ _ 12 c- c- SYM NFP _ _ _ _ SpaceAfter=No 13 Myb Myb NOUN NN Number=Sing _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 v v NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 Myb Myb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 active active ADJ JJ Degree=Pos _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 combinatorial combinatorial ADJ JJ Degree=Pos _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 myeloid-cell myeloid-cell ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 specific specific ADJ JJ Degree=Pos _ _ _ _ 29 genes gene NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 such such ADJ JJ Degree=Pos _ _ _ _ 36 as as ADP IN _ _ _ _ _ 37 embryonic embryonic ADJ JJ Degree=Pos _ _ _ _ 38 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 10534 # text = In humans, similar effects were observed with homologous members of the CCAAT/enhancer-binding protein (C/EBP) family of transcriptional regulators, especially the human homolog of chicken NF-M, C/EBP-beta (NF-IL6). 1 In in ADP IN _ _ _ _ _ 2 humans human NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 similar similar ADJ JJ Degree=Pos _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 10 members member NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 CCAAT Ccaat NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 binding binding VERB VBG VerbForm=Ger _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 C/ Cith NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 EBP EBP NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 family family NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 26 regulators regulator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 especially especially ADV RB _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 homolog homolog NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 chicken chicken NOUN NN Number=Sing _ _ _ _ 34 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 C/EBP- C/EBP- NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 beta beta NOUN NN Number=Sing _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 IL6 IL6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 10535 # text = However, the NF-IL6 gene is expressed in a variety of nonmyeloid cell types and is strongly inducible in response to inflammatory stimuli, making it an unlikely candidate to have an exclusive role as a combinatorial differentiation switch during myelopoiesis in human cells. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 variety variety NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 nonmyeloid nonmyeloid ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 types type NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 strongly strongly ADV RB _ _ _ _ _ 20 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 response response NOUN NN Number=Sing _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 25 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 making make VERB VBG VerbForm=Ger _ _ _ _ 28 it it PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 29 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 unlikely unlikely ADJ JJ Degree=Pos _ _ _ _ 31 candidate candidate NOUN NN Number=Sing _ _ _ _ 32 to to PART TO _ _ _ _ _ 33 have have VERB VB VerbForm=Inf _ _ _ _ 34 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 exclusive exclusive ADJ JJ Degree=Pos _ _ _ _ 36 role role NOUN NN Number=Sing _ _ _ _ 37 as as ADP IN _ _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 combinatorial combinatorial ADJ JJ Degree=Pos _ _ _ _ 40 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 41 switch switch NOUN NN Number=Sing _ _ _ _ 42 during during ADP IN _ _ _ _ _ 43 myelopoiesis myelopoiesis NOUN NN Number=Sing _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 human human ADJ JJ Degree=Pos _ _ _ _ 46 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 10536 # text = By using a reverse transcription-PCR-based approach and a set of primers specific for the DNA-binding domains of highly homologous members of the C/EBP family of transcriptional regulators, we have cloned a novel human gene encoding a member of the C/EBP gene family, identified as the human homolog of CRP1, C/EBP-epsilon. 1 By by SCONJ IN _ _ _ _ _ 2 using use VERB VBG VerbForm=Ger _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 reverse reverse NOUN NN Number=Sing _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 PCR Pcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 approach approach NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 set set NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 primers primer NOUN NNS Number=Plur _ _ _ _ 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 binding binding VERB VBG VerbForm=Ger _ _ _ _ 22 domains domain NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 highly highly ADV RB _ _ _ _ _ 25 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 26 members member NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 / / PUNCT , _ _ _ _ SpaceAfter=No 31 EBP EBP PROPN NNP Number=Sing _ _ _ _ 32 family family NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 35 regulators regulator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 38 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 39 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 41 novel novel NOUN NN Number=Sing _ _ _ _ 42 human human ADJ JJ Degree=Pos _ _ _ _ 43 gene gene NOUN NN Number=Sing _ _ _ _ 44 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 45 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 46 member member NOUN NN Number=Sing _ _ _ _ 47 of of ADP IN _ _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 / / PUNCT , _ _ _ _ SpaceAfter=No 51 EBP EBP PROPN NNP Number=Sing _ _ _ _ 52 gene gene ADJ JJ Degree=Pos _ _ _ _ 53 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 , , PUNCT , _ _ _ _ _ 55 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 56 as as ADP IN _ _ _ _ _ 57 the the DET DT Definite=Def|PronType=Art _ _ _ _ 58 human human ADJ JJ Degree=Pos _ _ _ _ 59 homolog homolog NOUN NN Number=Sing _ _ _ _ 60 of of ADP IN _ _ _ _ _ 61 CRP1 CRP1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 62 , , PUNCT , _ _ _ _ _ 63 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 64 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 65 EBP EBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 66 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 67 epsilon epsilon PROPN NNP Number=Sing _ _ _ SpaceAfter=No 68 . . PUNCT . _ _ _ _ _ # sent_id = 10537 # text = A 1.2-kb cDNA encoding full-length human C/EBP-epsilon was cloned from a promyelocyte-late myeloblast-derived lambda gt11 library. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 1.2 1.2 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kb kb NOUN NN Number=Sing _ _ _ _ 5 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 6 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 7 full full ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 length length NOUN NN Number=Sing _ _ _ _ 10 human human NOUN NN Number=Sing _ _ _ _ 11 C c PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 EBP- EBP- SYM NFP _ _ _ _ SpaceAfter=No 14 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 cloned clon VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 promyelocyte promyelocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 late late ADJ JJ Degree=Pos _ _ _ _ 22 myeloblast myeloblast NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 lambda lambda NOUN NN Number=Sing _ _ _ _ 26 gt11 gt11 NUM CD NumType=Card _ _ _ _ 27 library library NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 10538 # text = Molecular analysis of the cDNA and genomic clones indicated the presence of two exons encoding a protein with an apparent molecular mass of 32 kDa and a pI of 9.5. 1 Molecular Molecular ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 cDNA cDNa PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 8 clones clone NOUN NNS Number=Plur _ _ _ _ 9 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 presence presence NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 two two NUM CD NumType=Card _ _ _ _ 14 exons exon NOUN NNS Number=Plur _ _ _ _ 15 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 apparent apparent ADJ JJ Degree=Pos _ _ _ _ 21 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 22 mass mass NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 32 32 NUM CD NumType=Card _ _ _ _ 25 kDa kDa PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 pI pi NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 9.5 9.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 10539 # text = Primer extension analysis of C/EBP-epsilon mRNA detected a single major transcription start site approximately 200 bp upstream of the start codon. 1 Primer Primer NOUN NN Number=Sing _ _ _ _ 2 extension extension NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 / / PUNCT , _ _ _ _ SpaceAfter=No 7 EBP EBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 epsilon epsilon PROPN NNP Number=Sing _ _ _ _ 10 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 11 detected detect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 single single ADJ JJ Degree=Pos _ _ _ _ 14 major major ADJ JJ Degree=Pos _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 start start NOUN NN Number=Sing _ _ _ _ 17 site site NOUN NN Number=Sing _ _ _ _ 18 approximately approximately ADV RB _ _ _ _ _ 19 200 200 NUM CD NumType=Card _ _ _ _ 20 bp bp NOUN NN Number=Sing _ _ _ _ 21 upstream upstream NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 start start NOUN NN Number=Sing _ _ _ _ 25 codon codon NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 10540 # text = The putative promoter area is similar to those of several other myeloid-cell-specific genes in that it contains no TATAAA box but has a number of purine-rich stretches with multiple sites for the factors of the Ets family of transcriptional regulators. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 putative putative ADJ JJ Degree=Pos _ _ _ _ 3 promoter promoter NOUN NN Number=Sing _ _ _ _ 4 area area NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 similar similar ADJ JJ Degree=Pos _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 several several ADJ JJ Degree=Pos _ _ _ _ 11 other other ADJ JJ Degree=Pos _ _ _ _ 12 myeloid myeloid NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 in in SCONJ IN _ _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 21 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 no no DET DT _ _ _ _ _ 23 TATAAA TATAAa NOUN NN Number=Sing _ _ _ _ 24 box box NOUN NN Number=Sing _ _ _ _ 25 but but CCONJ CC _ _ _ _ _ 26 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 number number NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 purine purine NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 rich rich ADJ JJ Degree=Pos _ _ _ _ 33 stretches stretch NOUN NNS Number=Plur _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 36 sites site NOUN NNS Number=Plur _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 factors factor NOUN NNS Number=Plur _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 Ets et NOUN NNS Number=Plur _ _ _ _ 43 family family NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 46 regulators regulator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 10541 # text = Northern blot analyses indicated a highly restricted mRNA expression pattern, with the strongest expression occurring in promyelocyte and late-myeloblast-like cell lines. 1 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 analyses analysis NOUN NNS Number=Plur _ _ _ _ 4 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 highly highly ADV RB _ _ _ _ _ 7 restricted restricted VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 mRNA mRNa DET DT Definite=Ind|PronType=Art _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 pattern pattern NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 strongest strongest ADJ JJS Degree=Sup _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 occurring occurre VERB VBG VerbForm=Ger _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 promyelocyte promyelocyte NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 late late ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 myeloblast myeloblast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 like like ADJ JJ Degree=Pos _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 10542 # text = Western blot and immunoprecipitation studies using rabbit anti-C/EBP-epsilon antibodies raised against the N-terminal portion of C/EBP-epsilon (amino acids 1 to 115) showed that C/EBP-epsilon is a 32-kDa nuclear phosphoprotein. 1 Western western ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 immunoprecipitation immunoprecipitation NOUN NN Number=Sing _ _ _ _ 5 studies study NOUN NNS Number=Plur _ _ _ _ 6 using use VERB VBG VerbForm=Ger _ _ _ _ 7 rabbit rabbit NOUN NN Number=Sing _ _ _ _ 8 anti-C anti-c NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 / / PUNCT , _ _ _ _ SpaceAfter=No 10 EBP Ebp NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 13 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 14 raised raise VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 against against ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 N- N- SYM SYM _ _ _ _ SpaceAfter=No 18 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 19 portion portion NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 23 EBP EBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 epsilon epsilon PROPN NNP Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 amino amino DET DT _ _ _ _ _ 28 acids acid NOUN NNS Number=Plur _ _ _ _ 29 1 1 NUM CD NumType=Card _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 115 115 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 that that SCONJ IN _ _ _ _ _ 35 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 / / PUNCT , _ _ _ _ SpaceAfter=No 37 EBP- EBP- PUNCT : _ _ _ _ SpaceAfter=No 38 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 39 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 40 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 41 32 32 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 kDa kDa NOUN NN Number=Sing _ _ _ _ 44 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 45 phosphoprotein phosphoprotein NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 10543 # text = The human C/EBP-epsilon protein exhibited strong and specific binding to double-stranded DNA containing consensus C/EBP sites. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 C C NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 / / PUNCT , _ _ _ _ SpaceAfter=No 5 EBP EBP NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 exhibited exhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 strong strong ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 stranded stranded VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 DNA dna NOUN NN Number=Sing _ _ _ _ 19 containing contain VERB VBG VerbForm=Ger _ _ _ _ 20 consensus consensus NOUN NN Number=Sing _ _ _ _ 21 C/ C/ PUNCT HYPH _ _ _ _ SpaceAfter=No 22 EBP EBP NOUN NN Number=Sing _ _ _ _ 23 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 10544 # text = Cotransfection of the C/EBP-epsilon sense and antisense expression constructs together with chloramphenicol acetyltransferase reporter vectors containing myeloid-cell-specific c-mim and human myeloperoxidase promoters suggested a role for C/EBP-epsilon transcription factor in the regulation of a subset of myeloid-cell-specific genes. 1 Cotransfection Cotransfection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 6 EBP EBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 9 sense sense NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 antisense antisense ADJ JJ Degree=Pos _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 constructs construct NOUN NNS Number=Plur _ _ _ _ 14 together together ADV RB _ _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 17 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 18 reporter reporter NOUN NN Number=Sing _ _ _ _ 19 vectors vector NOUN NNS Number=Plur _ _ _ _ 20 containing contain VERB VBG VerbForm=Ger _ _ _ _ 21 myeloid-cell myeloid-cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 specific specific ADJ JJ Degree=Pos _ _ _ _ 24 c-mim c-mim NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 myeloperoxidase myeloperoxidase NOUN NN Number=Sing _ _ _ _ 28 promoters promoter NOUN NNS Number=Plur _ _ _ _ 29 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 role role NOUN NN Number=Sing _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 / / PUNCT , _ _ _ _ SpaceAfter=No 35 EBP EBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 38 transcription transcription NOUN NN Number=Sing _ _ _ _ 39 factor factor NOUN NN Number=Sing _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 regulation regulation NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 45 subset subset NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 myeloid myeloid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 specific specific ADJ JJ Degree=Pos _ _ _ _ 52 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 10545 # text = Transient tranfection of a promyelocyte cell line (NB4) with a C/EBP-epsilon expression plasmid increased cell growth by sevenfold, while antisense C/EBP-epsilon caused a fivefold decrease in clonal growth of these cells. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 tranfection tranfection NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 promyelocyte promyelocyte NOUN NN Number=Sing _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 line line NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 NB4 NB4 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 EBP EBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 epsilon epsilon X FW Foreign=Yes _ _ _ _ 18 expression expression X GW _ _ _ _ _ 19 plasmid plasmid X AFX _ _ _ _ _ 20 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 growth growth NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 sevenfold sevenfold ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 while while SCONJ IN _ _ _ _ _ 27 antisense antisense ADJ JJ Degree=Pos _ _ _ _ 28 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 / / PUNCT , _ _ _ _ SpaceAfter=No 30 EBP- EBP- SYM NFP _ _ _ _ SpaceAfter=No 31 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 32 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 fivefold fivefold ADJ JJ Degree=Pos _ _ _ _ 35 decrease decrease NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 clonal clonal ADJ JJ Degree=Pos _ _ _ _ 38 growth growth NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10546 # text = Document 0030012232 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012232 0030012232 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10547 # text = Regulation of the Ets-related transcription factor Elf-1 by binding to the retinoblastoma protein. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 Ets- Ets- SYM SYM _ _ _ _ SpaceAfter=No 5 related related ADJ JJ Degree=Pos _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 by by SCONJ IN _ _ _ _ _ 12 binding bind VERB VBG VerbForm=Ger _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 retinoblastoma retinoblastoma NOUN NN Number=Sing _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10548 # text = The retinoblastoma gene product (Rb) is a nuclear phosphoprotein that regulates cell cycle progression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 retinoblastoma retinoblastoma NOUN NN Number=Sing _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ _ 4 product product NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 Rb Rb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 phosphoprotein phosphoprotein NOUN NN Number=Sing _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 cycle cycle NOUN NN Number=Sing _ _ _ _ 16 progression progression NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 10549 # text = Elf-1 is a lymphoid-specific Ets transcription factor that regulates inducible gene expression during T cell activation. 1 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 lymphoid lymphoid NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 Ets et NOUN NNS Number=Plur _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 during during ADP IN _ _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 10550 # text = In this report, it is demonstrated that Elf-1 contains a sequence motif that is highly related to the Rb binding sites of several viral oncoproteins and binds to the pocket region of Rb both in vitro and in vivo. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - SYM SYM _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 sequence sequence NOUN NN Number=Sing _ _ _ _ 15 motif motif NOUN NN Number=Sing _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 highly highly ADV RB _ _ _ _ _ 19 related related ADJ JJ Degree=Pos _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 Rb Rb NOUN NN Number=Sing _ _ _ _ 23 binding bind VERB VBG VerbForm=Ger _ _ _ _ 24 sites site NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 several several ADJ JJ Degree=Pos _ _ _ _ 27 viral viral ADJ JJ Degree=Pos _ _ _ _ 28 oncoproteins oncoprotein NOUN NNS Number=Plur _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 binds bind NOUN NNS Number=Plur _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 pocket pocket NOUN NN Number=Sing _ _ _ _ 34 region region NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 Rb Rb PROPN NNP Number=Sing _ _ _ _ 37 both both CCONJ CC _ _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 vitro vitro NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 vivo. vivo. NOUN NN Number=Sing _ _ _ _ # sent_id = 10551 # text = Elf-1 binds exclusively to the underphosphorylated form of Rb and fails to bind to Rb mutants derived from patients with retinoblastoma. 1 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 binds bind NOUN NNS Number=Plur _ _ _ _ 5 exclusively exclusively ADV RB _ _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 underphosphorylated underphosphorylated ADJ JJ Degree=Pos _ _ _ _ 9 form form NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 Rb Rb PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 fails fail VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 bind bind VERB VB VerbForm=Inf _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 Rb Rb PROPN NNP Number=Sing _ _ _ _ 18 mutants mutant NOUN NNS Number=Plur _ _ _ _ 19 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 patients patient NOUN NNS Number=Plur _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 retinoblastoma retinoblastoma NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 10552 # text = Co-immunoprecipitation experiments demonstrated an association between Elf-1 and Rb in resting normal human T cells. 1 Co co PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -immunoprecipitation -immunoprecipitation NOUN NN Number=Sing _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ _ 4 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 association association NOUN NN Number=Sing _ _ _ _ 7 between between ADP IN _ _ _ _ _ 8 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 Rb Rb PROPN NNP Number=Sing _ _ _ _ 13 in in SCONJ IN _ _ _ _ _ 14 resting rest VERB VBG VerbForm=Ger _ _ _ _ 15 normal normal ADJ JJ Degree=Pos _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 10553 # text = After T cell activation, the phosphorylation of Rb results in the release of Elf-1, which is correlated temporally with the activation of Elf-1-mediated transcription. 1 After after SCONJ IN _ _ _ _ _ 2 T t PROPN NNP Number=Sing _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 Rb Rb PROPN NNP Number=Sing _ _ _ _ 10 results result NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 release release NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 correlated correlate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 temporally temporally ADV RB _ _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 10554 # text = Overexpression of a phosphorylation-defective form of Rb inhibited Elf-1-dependent transcription during T cell activation. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 defective defective ADJ JJ Degree=Pos _ _ _ _ 7 form form NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 Rb Rb PROPN NNP Number=Sing _ _ _ _ 10 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 during during ADP IN _ _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 10555 # text = These results demonstrate that Rb interacts specifically with a lineage-restricted Ets transcription factor. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Rb Rb PROPN NNP Number=Sing _ _ _ _ 6 interacts interact NOUN NNS Number=Plur _ _ _ _ 7 specifically specifically ADV RB _ _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 Ets Et NOUN NNS Number=Plur _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 10556 # text = This regulated interaction may be important for the coordination of lineage-specific effector functions such as lymphokine production with cell cycle progression in activated T cells. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 regulated regulate ADJ JJ Degree=Pos _ _ _ _ 3 interaction interaction NOUN NN Number=Sing _ _ _ _ 4 may may AUX MD VerbForm=Fin _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 important important ADJ JJ Degree=Pos _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 coordination coordination NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 effector effector NOUN NN Number=Sing _ _ _ _ 15 functions function NOUN NNS Number=Plur _ _ _ _ 16 such such ADJ JJ Degree=Pos _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 lymphokine lymphokine ADJ JJ Degree=Pos _ _ _ _ 19 production production NOUN NN Number=Sing _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 cycle cycle NOUN NN Number=Sing _ _ _ _ 23 progression progression NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 T T PROPN NNP Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10557 # text = Document 0030012238 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012238 0030012238 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10558 # text = Human cytomegalovirus induces interleukin-8 production by a human monocytic cell line, THP-1, through acting concurrently on AP-1- and NF-kappaB-binding sites of the interleukin-8 gene. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 cytomegalovirus cytomegalovirus NOUN NN Number=Sing _ _ _ _ 3 induces induce NOUN NNS Number=Plur _ _ _ _ 4 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 8 8 NUM CD NumType=Card _ _ _ _ 7 production production NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 through through SCONJ IN _ _ _ _ _ 20 acting act VERB VBG VerbForm=Ger _ _ _ _ 21 concurrently concurrently ADV RB _ _ _ _ _ 22 on on ADP IN _ _ _ _ _ 23 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 kappaB- kappaB- PUNCT , _ _ _ _ SpaceAfter=No 31 binding bind VERB VBG VerbForm=Ger _ _ _ _ 32 sites site NOUN NNS Number=Plur _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT , _ _ _ _ SpaceAfter=No 37 8 8 NUM CD NumType=Card _ _ _ _ 38 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10559 # text = Cytomegalovirus (CMV) infection induced interleukin-8 (IL-8) gene transcription in a human monocytic cell line, THP-1 cells, leading to IL-8 secretion. 1 Cytomegalovirus Cytomegalovirus PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 CMV CMV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 infection infection NOUN NN Number=Sing _ _ _ _ 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 8 8 NUM CD NumType=Card _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 8 8 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 leading lead VERB VBG VerbForm=Ger _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 8 8 NUM CD NumType=Card _ _ _ _ 34 secretion secretion NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 10560 # text = The functional analysis of the IL-8 gene revealed that both AP-1- and NF-kappaB factor-binding elements were involved in conferring the responsiveness to CMV. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 functional functional ADJ JJ Degree=Pos _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 8 8 NUM CD NumType=Card _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 both both DET DT _ _ _ _ _ 13 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 binding binding VERB VBG VerbForm=Ger _ _ _ _ 24 elements element NOUN NNS Number=Plur _ _ _ _ 25 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 involved involved ADJ JJ Degree=Pos _ _ _ _ 27 in in SCONJ IN _ _ _ _ _ 28 conferring conferr VERB VBG VerbForm=Ger _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 CMV CMV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 10561 # text = Moreover, electrophoretic mobility shift assays demonstrated that CMV induced the formation of NF-kappaB and AP-1 complexes. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 4 mobility mobility NOUN NN Number=Sing _ _ _ _ 5 shift shift NOUN NN Number=Sing _ _ _ _ 6 assays assays NOUN NNS Number=Plur _ _ _ _ 7 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 CMV CMV PROPN NNP Number=Sing _ _ _ _ 10 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 formation formation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 complexes complexe NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10562 # text = These results suggest that CMV activates these transcriptional factors, resulting in IL-8 gene expression. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 CMV CMV PROPN NNP Number=Sing _ _ _ _ 6 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 resulting result VERB VBG VerbForm=Ger _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 8 8 NUM CD NumType=Card _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10563 # text = Document 0030012240 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012240 0030012240 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10564 # text = The NF kappa B independent cis-acting sequences in HIV-1 LTR responsive to T-cell activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ _ 3 kappa kappa PROPN NNP Number=Sing _ _ _ _ 4 B B PROPN NNP Number=Sing _ _ _ _ 5 independent independent ADJ JJ Degree=Pos _ _ _ _ 6 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 acting acte VERB VBG VerbForm=Ger _ _ _ _ 9 sequences sequence NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 LTR Ltr NOUN NN Number=Sing _ _ _ _ 15 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 T- t- SYM NFP _ _ _ _ SpaceAfter=No 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10565 # text = The rate of transcription initiation directed by the long terminal repeat (LTR) of HIV-1 increases in response to mitogenic stimuli of T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 rate rate NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 initiation initiation NOUN NN Number=Sing _ _ _ _ 6 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 long long ADJ JJ Degree=Pos _ _ _ _ 10 terminal terminal NOUN NN Number=Sing _ _ _ _ 11 repeat repeat NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 LTR Ltr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 increases increase NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 response response NOUN NN Number=Sing _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 24 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 T t PROPN NNP Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 10566 # text = Here we show that the response of the HIV-1 LTR may be governed by two independent sequences located 5' to the site of transcription initiation sequences that bind either NFAT-1 or NF kappa B. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 response response NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 LTR Ltr NOUN NN Number=Sing _ _ _ _ 13 may may AUX MD VerbForm=Fin _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 governed govern VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 two two NUM CD NumType=Card _ _ _ _ 18 independent independent ADJ JJ Degree=Pos _ _ _ _ 19 sequences sequence NOUN NNS Number=Plur _ _ _ _ 20 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ' ' NOUN NNS Number=Plur _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 site site NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 initiation initiation NOUN NN Number=Sing _ _ _ _ 29 sequences sequence NOUN NNS Number=Plur _ _ _ _ 30 that that PRON WDT PronType=Rel _ _ _ _ 31 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 32 either either CCONJ CC _ _ _ _ _ 33 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ _ 36 or or CCONJ CC _ _ _ _ _ 37 NF NF PROPN NNP Number=Sing _ _ _ _ 38 kappa kappa PROPN NNP Number=Sing _ _ _ _ 39 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 10567 # text = The rate of LTR-directed gene expression increased in response to treatment with either a phorbol ester or tumor necrosis factor alpha if either the NFAT-1 or NF kappa B binding sites were deleted, but failed to respond to these mitogenic stimuli if both sequences were absent. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 rate rate NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 response response NOUN NN Number=Sing _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 treatment treatment VERB VB VerbForm=Inf _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 either either CCONJ CC _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 18 ester ester NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 tumor tumor NOUN NN Number=Sing _ _ _ _ 21 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 if if SCONJ IN _ _ _ _ _ 25 either either CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ _ 32 kappa kappa PROPN NNP Number=Sing _ _ _ _ 33 B b PROPN NNP Number=Sing _ _ _ _ 34 binding binding VERB VBG VerbForm=Ger _ _ _ _ 35 sites site NOUN NNS Number=Plur _ _ _ _ 36 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 37 deleted delete VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 but but CCONJ CC _ _ _ _ _ 40 failed fail VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 to to PART TO _ _ _ _ _ 42 respond respond VERB VB VerbForm=Inf _ _ _ _ 43 to to ADP IN _ _ _ _ _ 44 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 45 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 46 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 47 if if SCONJ IN _ _ _ _ _ 48 both both DET DT _ _ _ _ _ 49 sequences sequence NOUN NNS Number=Plur _ _ _ _ 50 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 51 absent absend VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 10568 # text = The HIV-1 mutant virus containing both NF kappa B and NFAT-1 deletion was able to replicate although at a much decreased growth rate, while the deletion of NFAT-1 alone increased the viral growth rate in Jurkat cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 mutant mutant NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 containing contain VERB VBG VerbForm=Ger _ _ _ _ 8 both both CCONJ CC _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ _ 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B B PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 deletion deletion NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 able able ADJ JJ Degree=Pos _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 replicate replicate VERB VB VerbForm=Inf _ _ _ _ 21 although although SCONJ IN _ _ _ _ _ 22 at at ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 much much ADJ JJ Degree=Pos _ _ _ _ 25 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 growth growth NOUN NN Number=Sing _ _ _ _ 27 rate rate NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 while while SCONJ IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 deletion deletion NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ _ 36 alone alone ADV RB _ _ _ _ _ 37 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 viral viral ADJ JJ Degree=Pos _ _ _ _ 40 growth growth NOUN NN Number=Sing _ _ _ _ 41 rate rate NOUN NN Number=Sing _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 10569 # text = Neither deletion of NF kappa B nor deletion of NFAT-1 decreased activation of viral replication by phorbol ester. 1 Neither neither DET DT _ _ _ _ _ 2 deletion deletion NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ _ 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B B PROPN NNP Number=Sing _ _ _ _ 7 nor nor ADJ JJ Degree=Pos _ _ _ _ 8 deletion deletion NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 viral viral ADJ JJ Degree=Pos _ _ _ _ 17 replication replication NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 20 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10570 # text = Document 0030012241 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012241 0030012241 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10571 # text = Control of NF-kappa B activity by the I kappa B beta inhibitor. 1 Control Control PROPN NNP Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B b ADJ JJ Degree=Pos _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 kappa kappa X FW Foreign=Yes _ _ _ _ 12 B b ADJ JJ Degree=Pos _ _ _ _ 13 beta beta NOUN NN Number=Sing _ _ _ _ 14 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10572 # text = The transcription factor NF-kappa B is maintained in an inactive cytoplasmic state by I kappa B inhibitors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 maintained maintain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 13 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 14 state state NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 17 kappa kappa X FW Foreign=Yes _ _ _ _ 18 B b ADJ JJ Degree=Pos _ _ _ _ 19 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 10573 # text = In mammalian cells, I kappa B alpha and I kappa B beta proteins have been purified and shown to be the inhibitors of NF-kappa B through their association with the p65 or c-Rel subunits. 1 In in ADP IN _ _ _ _ _ 2 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B B PROPN NNP Number=Sing _ _ _ _ 8 alpha alpha PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 kappa kappa X FW Foreign=Yes _ _ _ _ 12 B b ADJ JJ Degree=Pos _ _ _ _ 13 beta beta NOUN NN Number=Sing _ _ _ _ 14 proteins protein NOUN NNS Number=Plur _ _ _ _ 15 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 17 purified purify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa PROPN NNP Number=Sing _ _ _ _ 28 B b PROPN NNP Number=Sing _ _ _ _ 29 through through ADP IN _ _ _ _ _ 30 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 31 association association NOUN NN Number=Sing _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 p65 p65 NOUN NN Number=Sing _ _ _ _ 35 or or CCONJ CC _ _ _ _ _ 36 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 Rel Rel NOUN NN Number=Sing _ _ _ _ 39 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 10574 # text = In addition, we have isolated a third NF-kappa B inhibitor, I kappa B epsilon (1). 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 third third ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 9 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 kappa kappa PROPN NNP Number=Sing _ _ _ _ 17 B b PROPN NNP Number=Sing _ _ _ _ 18 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10575 # text = Upon treatment with a large variety of inducers, I kappa B alpha, I kappa B beta are proteolytically degraded, resulting in NF-kappa B translocation into the nucleus. 1 Upon upon ADP IN _ _ _ _ _ 2 treatment treatment NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 large large ADJ JJ Degree=Pos _ _ _ _ 6 variety variety NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 inducers inducer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 kappa kappa X FW Foreign=Yes _ _ _ _ 12 B b ADJ JJ Degree=Pos _ _ _ _ 13 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 kappa kappa X FW Foreign=Yes _ _ _ _ 17 B b ADJ JJ Degree=Pos _ _ _ _ 18 beta beta NOUN NN Number=Sing _ _ _ _ 19 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 proteolytically proteolytically ADV RB _ _ _ _ _ 21 degraded degrad VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 resulting result VERB VBG VerbForm=Ger _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa PROPN NNP Number=Sing _ _ _ _ 28 B b PROPN NNP Number=Sing _ _ _ _ 29 translocation translocation NOUN NN Number=Sing _ _ _ _ 30 into into ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 10576 # text = Here we show that in E29.1 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 E29.1 E29.1 PROPN NNP Number=Sing _ _ _ _ # sent_id = 10577 # text = T cell hybridoma 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 hybridoma hybridoma NOUN NN Number=Sing _ _ _ _ # sent_id = 10578 # text = I kappa B alpha and I kappa B beta are equally associated with p65 and that I kappa B beta is degraded in response to TNF alpha in contrast to what has been originally published. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa PROPN NNP Number=Sing _ _ _ _ 3 B b PROPN NNP Number=Sing _ _ _ _ 4 alpha alpha PROPN NNP Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 kappa kappa X FW Foreign=Yes _ _ _ _ 8 B b ADJ JJ Degree=Pos _ _ _ _ 9 beta beta NOUN NN Number=Sing _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 equally equally ADV RB _ _ _ _ _ 12 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 p65 p65 NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B b PROPN NNP Number=Sing _ _ _ _ 20 beta beta PROPN NNP Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 degraded degrad VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 response response NOUN NN Number=Sing _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 TNF TNF PROPN NNP Number=Sing _ _ _ _ 27 alpha alpha ADV RB _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 contrast contrast NOUN NN Number=Sing _ _ _ _ 30 to to SCONJ IN _ _ _ _ _ 31 what what PRON WP PronType=Int _ _ _ _ 32 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 34 originally originally ADV RB _ _ _ _ _ 35 published publish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 10579 # text = Our data also suggest that, unlike I kappa B alpha, I kappa B beta is constitutively phosphorylated and resynthesized as a hypophosphorylated form. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 5 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 unlike unlike ADP IN _ _ _ _ _ 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B b PROPN NNP Number=Sing _ _ _ _ 11 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 14 kappa kappa X FW Foreign=Yes _ _ _ _ 15 B b ADJ JJ Degree=Pos _ _ _ _ 16 beta beta NOUN NN Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 constitutively constitutively ADV RB _ _ _ _ _ 19 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 resynthesized resynthesize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 as as ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 hypophosphorylated hypophosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 form form NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 10580 # text = The absence of slow migrating forms of I kappa B beta following stimulation suggests that the phosphorylation does not necessarily constitute the signal-induced event which targets the molecule for proteolysis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 absence absence NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 slow slow ADJ JJ Degree=Pos _ _ _ _ 5 migrating migrating NOUN NN Number=Sing _ _ _ _ 6 forms form NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 kappa kappa X FW Foreign=Yes _ _ _ _ 10 B b ADJ JJ Degree=Pos _ _ _ _ 11 beta beta NOUN NN Number=Sing _ _ _ _ 12 following follow VERB VBG VerbForm=Ger _ _ _ _ 13 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 14 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 18 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 necessarily necessarily ADV RB _ _ _ _ _ 21 constitute constitute VERB VB VerbForm=Inf _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 event event NOUN NN Number=Sing _ _ _ _ 27 which which PRON WDT PronType=Rel _ _ _ _ 28 targets target AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 molecule molecule NOUN NN Number=Sing _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 proteolysis proteolysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10581 # text = Document 0030012248 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012248 0030012248 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10582 # text = Lipopolysaccharide induction of tissue factor gene expression in monocytic cells is mediated by binding of c-Rel/p65 heterodimers to a kappa B-like site. 1 Lipopolysaccharide Lipopolysaccharide VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 tissue tissue NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by SCONJ IN _ _ _ _ _ 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 / / PUNCT , _ _ _ _ SpaceAfter=No 20 p65 p65 NUM CD NumType=Card _ _ _ _ 21 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 like like ADJ JJ Degree=Pos _ _ _ _ 28 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10583 # text = Exposure of monocytic cells to bacterial lipopolysaccharide (LPS) activates the NF-kappa 1 Exposure exposure NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 7 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 LPS LPS NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 10584 # text = B/Rel family of proteins and leads to the rapid induction of inflammatory gene products, including tissue factor (TF). 1 B benefit ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 / / PUNCT , _ _ _ _ SpaceAfter=No 3 Rel Rel ADJ JJ Degree=Pos _ _ _ _ 4 family family NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 proteins protein NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 leads lead NOUN NNS Number=Plur _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 products product NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 including include VERB VBG VerbForm=Ger _ _ _ _ 19 tissue tissue NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 TF TF NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 10585 # text = TF is the primary cellular initiator of the coagulation protease cascades. 1 TF TF PRON PRP Case=Acc|Number=Sing|Person=1|PronType=Prs|Reflex=Yes _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 primary primary ADJ JJ Degree=Pos _ _ _ _ 5 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 6 initiator initiator NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 coagulation coagulation NOUN NN Number=Sing _ _ _ _ 10 protease protease NOUN NN Number=Sing _ _ _ _ 11 cascades cascade NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 10586 # text = Here we report the characterization of a nuclear complex from human monocytic cells that bound to a kappa B-like site, 5'-CGGAGTTTCC-3', in the 5'-flanking region of the human TF gene. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 characterization characterization NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 complex complex NOUN NN Number=Sing _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 bound bound VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 like like ADJ JJ Degree=Pos _ _ _ _ 22 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 26 -CGGAGTTTCC -cggagtttcc NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 37 region region NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 human human ADJ JJ Degree=Pos _ _ _ _ 41 TF Tf NOUN NN Number=Sing _ _ _ _ 42 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 10587 # text = This nuclear complex was activated by LPS with kinetics that preceded induction of the TF gene. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 complex complex NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 LPS Lps NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 preceded proceed VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 TF TF PROPN NNP Number=Sing _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 10588 # text = In vitro binding studies demonstrated that the TF site bound translated c-Rel and p65 homodimers but not p50/p65 heterodimers or p50 homodimers. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro NOUN NN Number=Sing _ _ _ _ 3 binding binding VERB VBG VerbForm=Ger _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ _ 5 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 TF TF PROPN NNP Number=Sing _ _ _ _ 9 site site NOUN NN Number=Sing _ _ _ _ 10 bound bound ADJ JJ Degree=Pos _ _ _ _ 11 translated translate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 c- c- SYM NFP _ _ _ _ SpaceAfter=No 13 Rel Rel PROPN NNP Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 p65 p65 NUM CD NumType=Card _ _ _ _ 16 homodimers homodimer NOUN NNS Number=Plur _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 not not ADV RB _ _ _ _ _ 19 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 / / SYM SYM _ _ _ _ SpaceAfter=No 21 p65 p65 NUM CD NumType=Card _ _ _ _ 22 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 p50 p50 NOUN NN Number=Sing _ _ _ _ 25 homodimers homodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 10589 # text = Base-pair substitutions in the TF site indicated that the presence of a cytosine at position 1 precluded binding of NF-kappa B. 1 Base base NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 pair pair NOUN NN Number=Sing _ _ _ _ 4 substitutions substitution NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 TF TF PROPN NNP Number=Sing _ _ _ _ 8 site site NOUN NN Number=Sing _ _ _ _ 9 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 presence presence NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 cytosine cytosine NOUN NN Number=Sing _ _ _ _ 16 at at ADP IN _ _ _ _ _ 17 position position NOUN NN Number=Sing _ _ _ _ 18 1 1 NUM CD NumType=Card _ _ _ _ 19 precluded preclude VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 binding binding VERB VBG VerbForm=Ger _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ 25 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 10590 # text = In fact, under low-ionic-strength conditions, the TF complex did not migrate with translated p50/p65 dimers but instead comigrated with c-Rel/p65 dimers. 1 In in ADP IN _ _ _ _ _ 2 fact fact NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 under under ADP IN _ _ _ _ _ 5 low-ionic low-ionic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 strength strength NOUN NN Number=Sing _ _ _ _ 8 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 TF TF PROPN NNP Number=Sing _ _ _ _ 12 complex complex NOUN NN Number=Sing _ _ _ _ 13 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 migrate migrate VERB VB VerbForm=Inf _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 translated translate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 / / PUNCT , _ _ _ _ SpaceAfter=No 20 p65 p65 NUM CD NumType=Card _ _ _ _ 21 dimers dimer NOUN NNS Number=Plur _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 instead instead ADV RB _ _ _ _ _ 24 comigrated comigrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 c- c- SYM NFP _ _ _ _ SpaceAfter=No 27 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 / / PUNCT , _ _ _ _ SpaceAfter=No 29 p65 p65 NUM CD NumType=Card _ _ _ _ 30 dimers dimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 10591 # text = Antibodies against the NF-kappa B and Rel proteins and UV cross-linking studies revealed the presence of c-Rel and p65 and the absence of p50 in the TF complex and further showed that c-Rel/p65 heterodimers selectively bound to the TF kappa B-like site. 1 Antibodies Antibody NOUN NNS Number=Plur _ _ _ _ 2 against against ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B b PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 Rel Rel PROPN NNP Number=Sing _ _ _ _ 10 proteins protein PROPN NNPS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 UV UV PROPN NNP Number=Sing _ _ _ _ 13 cross cross VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 14 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 15 studies study NOUN NNS Number=Plur _ _ _ _ 16 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 presence presence NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 Rel Rel NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 p65 p65 NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 absence absence NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 p50 p50 NUM CD NumType=Card _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 TF TF NOUN NN Number=Sing _ _ _ _ 33 complex complex NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 further further ADV RB _ _ _ _ _ 36 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 37 that that SCONJ IN _ _ _ _ _ 38 c- c- SYM NFP _ _ _ _ SpaceAfter=No 39 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 / / PUNCT , _ _ _ _ SpaceAfter=No 41 p65 p65 NUM CD NumType=Card _ _ _ _ 42 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 43 selectively selectively ADV RB _ _ _ _ _ 44 bound bound ADJ JJ Degree=Pos _ _ _ _ 45 to to ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 TF TF PROPN NNP Number=Sing _ _ _ _ 48 kappa kappa PROPN NNP Number=Sing _ _ _ _ 49 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 like like ADJ JJ Degree=Pos _ _ _ _ 52 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 10592 # text = Functional studies indicated that the TF site conferred LPS inducibility on a heterologous promoter and was transactivated by c-Rel or p65. 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 TF TF PROPN NNP Number=Sing _ _ _ _ 7 site site NOUN NN Number=Sing _ _ _ _ 8 conferred confer VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 LPS LPS ADJ JJ Degree=Pos _ _ _ _ 10 inducibility inducibility NOUN NN Number=Sing _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 transactivated transactivate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 Rel Rel NOUN NN Number=Sing _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 10593 # text = Taken together, our results demonstrated that binding of c-Rel/p65 heterodimers to a novel kappa 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 / / PUNCT , _ _ _ _ SpaceAfter=No 14 p65 p65 NUM CD NumType=Card _ _ _ _ 15 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 novel novel NOUN NN Number=Sing _ _ _ _ 19 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 10594 # text = B-like site mediated LPS induction of TF gene expression in monocytic cells. 1 B b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 like like ADJ JJ Degree=Pos _ _ _ _ 4 site site NOUN NN Number=Sing _ _ _ _ 5 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 LPS LPS PROPN NNP Number=Sing _ _ _ _ 7 induction induction NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 TF TF PROPN NNP Number=Sing _ _ _ _ 10 gene gene PROPN NNP Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10595 # text = Document 0030012250 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012250 0030012250 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10596 # text = A thiol antioxidant regulates IgE isotype switching by inhibiting activation of nuclear factor-kappaB. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 thiol thiol ADJ JJ Degree=Pos _ _ _ _ 3 antioxidant antioxidant NOUN NN Number=Sing _ _ _ _ 4 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 IgE Ige ADJ JJ Degree=Pos _ _ _ _ 6 isotype isotype NOUN NN Number=Sing _ _ _ _ 7 switching switch VERB VBG VerbForm=Ger _ _ _ _ 8 by by SCONJ IN _ _ _ _ _ 9 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10597 # text = The binding site for nuclear factor-kappaB (NF-kappaB) is present at the promoter region of the germline Cepsilon gene, but there is little information on whether this factor is involved in regulating IgE synthesis by human B cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 binding binding VERB VBG VerbForm=Ger _ _ _ _ 3 site site NOUN NN Number=Sing _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 -kappaB -kappaB PROPN NNP Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 present present ADJ JJ Degree=Pos _ _ _ _ 15 at at ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 region region NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 germline germline PROPN NNP Number=Sing _ _ _ _ 22 Cepsilon Cepsilon PROPN NNP Number=Sing _ _ _ _ 23 gene gene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 but but CCONJ CC _ _ _ _ _ 26 there there PRON EX _ _ _ _ _ 27 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 little little ADJ JJ Degree=Pos _ _ _ _ 29 information information NOUN NN Number=Sing _ _ _ _ 30 on on SCONJ IN _ _ _ _ _ 31 whether whether SCONJ IN _ _ _ _ _ 32 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 33 factor factor NOUN NN Number=Sing _ _ _ _ 34 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 involved involved ADJ JJ Degree=Pos _ _ _ _ 36 in in SCONJ IN _ _ _ _ _ 37 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 38 IgE Ige ADJ JJ Degree=Pos _ _ _ _ 39 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 40 by by ADP IN _ _ _ _ _ 41 human human ADJ JJ Degree=Pos _ _ _ _ 42 B b ADJ JJ Degree=Pos _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 10598 # text = Accordingly, we studied the role of NF-kappaB in germline Cepsilon transcription by using two human Burkitt's lymphoma B cell lines, DND39 and DG75. 1 Accordingly accordingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 germline germline PROPN NNP Number=Sing _ _ _ _ 13 Cepsilon Cepsilon PROPN NNP Number=Sing _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 by by SCONJ IN _ _ _ _ _ 16 using use VERB VBG VerbForm=Ger _ _ _ _ 17 two two NUM CD NumType=Card _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 Burkitt Burkitt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 's 's PART POS _ _ _ _ _ 21 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 DND39 DND39 PROPN NNP Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 DG75 DG75 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 10599 # text = In both cell lines, n-acetyl-L-cysteine (NAC), a potent thiol antioxidant, inhibited the triggering of the nuclear expression of NF-kappaB by IL-4 and by anti-CD40 monoclonal antibody. 1 In in ADP IN _ _ _ _ _ 2 both both DET DT _ _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 n- n- SYM NFP _ _ _ _ SpaceAfter=No 7 acetyl acetyl ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 -L- -l- NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 NAC NAC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 potent potent NOUN NN Number=Sing _ _ _ _ 16 thiol thiol NOUN NN Number=Sing _ _ _ _ 17 antioxidant antioxidant NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 triggering triggering NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 4 4 NUM CD NumType=Card _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 anti-CD40 anti-CD40 NUM CD NumType=Card _ _ _ _ 37 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 38 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 10600 # text = Although IL-4 activated signal transducers and activators of transcription (STAT) 6 in addition to NF-kappaB, NAC treatment or the transfection of decoy oligodeoxynucleotides for NF-kappaB or STAT6 only partly blocked IL-4-induced germline Cepsilon transcription. 1 Although although SCONJ IN _ _ _ _ _ 2 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - SYM SYM _ _ _ _ SpaceAfter=No 4 4 4 NUM CD NumType=Card _ _ _ _ 5 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 signal signal ADJ JJ Degree=Pos _ _ _ _ 7 transducers transducer NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 activators activator NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 STAT STAT NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 6 6 NUM CD NumType=Card _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 addition addition NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 NAC NAC PROPN NNP Number=Sing _ _ _ _ 24 treatment treatment NOUN NN Number=Sing _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 transfection transfection NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 decoy decoy NOUN NN Number=Sing _ _ _ _ 30 oligodeoxynucleotides oligodeoxynucleotide NOUN NNS Number=Plur _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 35 or or CCONJ CC _ _ _ _ _ 36 STAT6 STAT6 PROPN NNP Number=Sing _ _ _ _ 37 only only ADV RB _ _ _ _ _ 38 partly partly ADV RB _ _ _ _ _ 39 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 germline germline NOUN NN Number=Sing _ _ _ _ 46 Cepsilon Cepsilon NOUN NN Number=Sing _ _ _ _ 47 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 10601 # text = However, these two decoy oligodeoxynucleotides together almost completely abrogated IL-4-induced germline Cepsilon transcription. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 decoy decoy NOUN NN Number=Sing _ _ _ _ 6 oligodeoxynucleotides oligodeoxynucleotide NOUN NNS Number=Plur _ _ _ _ 7 together together ADV RB _ _ _ _ _ 8 almost almost ADV RB _ _ _ _ _ 9 completely completely ADV RB _ _ _ _ _ 10 abrogated abrogate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 germline germline NOUN NN Number=Sing _ _ _ _ 17 Cepsilon Cepsilon NOUN NN Number=Sing _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 10602 # text = Of note, CD40-mediated enhancement of IL-4-driven germline Cepsilon transcription was markedly decreased by NAC or by a decoy oligodeoxynucleotide for NF-kappaB. 1 Of of ADP IN _ _ _ _ _ 2 note note NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 CD40 CD40 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 driven driven VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 germline germline NOUN NN Number=Sing _ _ _ _ 15 Cepsilon Cepsilon NOUN NN Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 markedly markedly ADV RB _ _ _ _ _ 19 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 NAC NAC PROPN NNP Number=Sing _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 decoy decoy NOUN NN Number=Sing _ _ _ _ 26 oligodeoxynucleotide oligodeoxynucleotide ADV RB _ _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 10603 # text = The effect of NAC was also examined on deletional switch recombination underlying the isotype switch to IgE. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NAC NAC PROPN NNP Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 deletional deletional ADJ JJ Degree=Pos _ _ _ _ 10 switch switch NOUN NN Number=Sing _ _ _ _ 11 recombination recombination NOUN NN Number=Sing _ _ _ _ 12 underlying underly VERB VBG VerbForm=Ger _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 isotype isotype NOUN NN Number=Sing _ _ _ _ 15 switch switch NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 IgE IgE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 10604 # text = NAC inhibited the generation of Smu/Sepsilon switch fragments in normal human B cells costimulated with IL-4 and anti-CD40 monoclonal antibody. 1 NAC NAC PROPN NNP Number=Sing _ _ _ _ 2 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 generation generation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 Smu/ Smuith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 7 Sepsilon Sepsilon PROPN NNP Number=Sing _ _ _ _ 8 switch switch NOUN NN Number=Sing _ _ _ _ 9 fragments fragment NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 normal normal ADJ JJ Degree=Pos _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 costimulated costimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 4 4 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 anti-CD40 anti-CD40 NUM CD NumType=Card _ _ _ _ 22 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 23 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 10605 # text = It also abolished IL-4-induced upregulation of CD40 but promoted upregulation of CD23. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 abolished abolish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 -induced -induced ADJ JJ Degree=Pos _ _ _ _ 8 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 promoted promote VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 CD23 CD23 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 10606 # text = These results suggest that coordination of NF-kappaB and STAT6 may be required for induction of germline Cepsilon transcription by IL-4, and that CD40-mediated NF-kappaB activation may be important in regulating both enhancement of germline Cepsilon transcription and class switching to IgE. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 coordination coordination NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 STAT6 Stat6 PROPN NNP Number=Sing _ _ _ _ 12 may may AUX MD VerbForm=Fin _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 germline germline PROPN NNP Number=Sing _ _ _ _ 19 Cepsilon Cepsilon PROPN NNP Number=Sing _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 that that SCONJ IN _ _ _ _ _ 28 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 -mediated -mediate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 33 activation activation NOUN NN Number=Sing _ _ _ _ 34 may may AUX MD VerbForm=Fin _ _ _ _ 35 be be AUX VB VerbForm=Inf _ _ _ _ 36 important important ADJ JJ Degree=Pos _ _ _ _ 37 in in SCONJ IN _ _ _ _ _ 38 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 39 both both DET DT _ _ _ _ _ 40 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 germline germline PROPN NNP Number=Sing _ _ _ _ 43 Cepsilon Cepsilon PROPN NNP Number=Sing _ _ _ _ 44 transcription transcription NOUN NN Number=Sing _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 class class NOUN NN Number=Sing _ _ _ _ 47 switching switch VERB VBG VerbForm=Ger _ _ _ _ 48 to to ADP IN _ _ _ _ _ 49 IgE IgE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10607 # text = Document 0030012253 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012253 0030012253 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10608 # text = Two distinct pathways of interleukin-5 synthesis in allergen-specific human T-cell clones are suppressed by glucocorticoids. 1 Two two NUM CD NumType=Card _ _ _ _ 2 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 3 pathways pathway NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 5 5 NUM CD NumType=Card _ _ _ _ 8 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 allergen allergen ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 clones clone NOUN NNS Number=Plur _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10609 # text = Glucocorticoids (GC) have long been used as the most effective agents for the treatment of allergic diseases accompanied by eosinophilia such as chronic asthma and atopic dermatitis. 1 Glucocorticoids Glucocorticoid NOUN NNS Number=Plur _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 GC GC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 long long ADV RB Degree=Pos _ _ _ _ 7 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 8 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 most most ADV RBS _ _ _ _ _ 12 effective effective ADJ JJ Degree=Pos _ _ _ _ 13 agents agent NOUN NNS Number=Plur _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 treatment treatment NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 allergic allergic ADJ JJ Degree=Pos _ _ _ _ 19 diseases disease NOUN NNS Number=Plur _ _ _ _ 20 accompanied accompany VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 eosinophilia eosinophilion NOUN NN Number=Sing _ _ _ _ 23 such such ADJ JJ Degree=Pos _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 26 asthma asthma NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 atopic atopic ADJ JJ Degree=Pos _ _ _ _ 29 dermatitis dermatitis NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 10610 # text = The development of chronic eosinophilic inflammation is dependent on interleukin-5 (IL-5), a selective eosinophil-activating factor, produced by helper T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 development development NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 5 eosinophilic eosinophilic ADJ JJ Degree=Pos _ _ _ _ 6 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 5 5 NUM CD NumType=Card _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 selective selective ADJ JJ Degree=Pos _ _ _ _ 21 eosinophil eosinophil NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 activating activating VERB VBG VerbForm=Ger _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 helper helper ADJ JJR Degree=Cmp _ _ _ _ 29 T t PROPN NNP Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 10611 # text = To delineate the regulatory mechanisms of human IL-5 synthesis, we established allergen-specific CD4+ T-cell clones from asthmatic patients. 1 To to PART TO _ _ _ _ _ 2 delineate delineate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 5 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 5 5 NUM CD NumType=Card _ _ _ _ 11 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 established establish VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 allergen-specific allergen-specific ADJ JJ Degree=Pos _ _ _ _ 16 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 + + SYM SYM _ _ _ _ _ 18 T- T- SYM SYM _ _ _ _ SpaceAfter=No 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 clones clone NOUN NNS Number=Plur _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 asthmatic asthmatic ADJ JJ Degree=Pos _ _ _ _ 23 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 10612 # text = GC efficiently suppressed IL-5 synthesis of T-cell clones activated via either T-cell receptor (TCR) or IL-2 receptor (IL-2R). 1 GC GC PROPN NNP Number=Sing _ _ _ _ 2 efficiently efficiently ADV RB _ _ _ _ _ 3 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 5 5 NUM CD NumType=Card _ _ _ _ 7 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 clones clone NOUN NNS Number=Plur _ _ _ _ 12 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 via via ADP IN _ _ _ _ _ 14 either either DET DT _ _ _ _ _ 15 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 TCR TCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 or or CCONJ CC _ _ _ _ _ 22 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 receptor receptor NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 2R 2r PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 10613 # text = Induction of IL-5 mRNA upon TCR and IL-2R stimulation was totally inhibited by dexamethasone. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 5 5 NUM CD NumType=Card _ _ _ _ 6 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 7 upon upon ADP IN _ _ _ _ _ 8 TCR TCR PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 X LS _ _ _ _ SpaceAfter=No 13 R r X GW _ _ _ _ _ 14 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 totally totally ADV RB _ _ _ _ _ 17 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 10614 # text = Human IL-5 promoter/enhancer-luciferase gene construct transfected to T-cell clones was transcribed on either TCR or IL-2R stimulation and was clearly downregulated by dexamethasone, indicating that the approximately 500-bp human IL-5 gene segment located 5' upstream of the coding region contains activation-inducible enhancer elements responsible for the regulation by GC. 1 Human human PROPN NNP Number=Sing _ _ _ _ 2 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 5 5 NUM CD NumType=Card _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 / / PUNCT , _ _ _ _ SpaceAfter=No 7 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 -luciferase -luciferase NOUN NN Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 construct construct NOUN NN Number=Sing _ _ _ _ 11 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 clones clone NOUN NNS Number=Plur _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 either either DET DT _ _ _ _ _ 20 TCR Tcr NOUN NN Number=Sing _ _ _ _ 21 or or CCONJ CC _ _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2R 2r NOUN NN Number=Sing _ _ _ _ 25 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 28 clearly clearly ADV RB _ _ _ _ _ 29 downregulated downregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 34 that that SCONJ IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 approximately approximately ADV RB _ _ _ _ _ 37 500 500 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 bp bp NOUN NN Number=Sing _ _ _ _ 40 human human ADJ JJ Degree=Pos _ _ _ _ 41 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT , _ _ _ _ SpaceAfter=No 43 5 5 NUM CD NumType=Card _ _ _ _ 44 gene gene NOUN NN Number=Sing _ _ _ _ 45 segment segment NOUN NN Number=Sing _ _ _ _ 46 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 ' ' PUNCT '' _ _ _ _ _ 49 upstream upstream NOUN NN Number=Sing _ _ _ _ 50 of of ADP IN _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 coding coding NOUN NN Number=Sing _ _ _ _ 53 region region NOUN NN Number=Sing _ _ _ _ 54 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 55 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 57 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 58 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 59 elements element NOUN NNS Number=Plur _ _ _ _ 60 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 61 for for ADP IN _ _ _ _ _ 62 the the DET DT Definite=Def|PronType=Art _ _ _ _ 63 regulation regulation NOUN NN Number=Sing _ _ _ _ 64 by by ADP IN _ _ _ _ _ 65 GC GC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 66 . . PUNCT . _ _ _ _ _ # sent_id = 10615 # text = Electrophoretic mobility shift assay analysis suggested that AP-1 and NF-kappaB are among the possible targets of GC actions on TCR-stimulated T cells. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assay assay NOUN NN Number=Sing _ _ _ _ 5 analysis analysis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 6 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappab PROPN NNP Number=Sing _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 among among ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 possible possible ADJ JJ Degree=Pos _ _ _ _ 19 targets target NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 GC Gc PROPN NNP Number=Sing _ _ _ _ 22 actions action NOUN NNS Number=Plur _ _ _ _ 23 on on ADP IN _ _ _ _ _ 24 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 T t PROPN NNP Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 10616 # text = NF-AT and NF-kappaB were not significantly induced by IL-2 stimulation. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 AT AT PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 significantly significantly ADV RB _ _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 10617 # text = Our results showing that GC suppressed IL-5 production by human CD4+ T cells activated by two distinct stimuli, TCR and IL-2R stimulation, underscore the efficacy of GC in the treatment of allergic diseases via suppression of T-cell IL-5 synthesis. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 showing show VERB VBG VerbForm=Ger _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 GC GC PROPN NNP Number=Sing _ _ _ _ 6 suppressed suppress VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 5 5 NUM CD NumType=Card _ _ _ _ 10 production production NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 + + SYM SYM _ _ _ _ _ 15 T t NUM CD NumType=Card _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 two two NUM CD NumType=Card _ _ _ _ 20 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 21 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 TCR TCR PROPN NNP Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2R 2R PROPN NNP Number=Sing _ _ _ _ 28 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 underscore underscore ADV RB _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 efficacy efficacy NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 GC GC PROPN NNP Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 treatment treatment NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 allergic allergic ADJ JJ Degree=Pos _ _ _ _ 40 diseases diseasis NOUN NNS Number=Plur _ _ _ _ 41 via via ADP IN _ _ _ _ _ 42 suppression suppression NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 cell cell NOUN NN Number=Sing _ _ _ _ 46 IL il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT , _ _ _ _ SpaceAfter=No 48 5 5 NUM CD NumType=Card _ _ _ _ 49 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10618 # text = Document 0030012258 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012258 0030012258 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10619 # text = Transcription of a minimal promoter from the NF-IL6 gene is regulated by CREB/ATF and SP1 proteins in U937 promonocytic cells. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 / / PUNCT , _ _ _ _ SpaceAfter=No 17 ATF ATF PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 SP1 SP1 NUM CD NumType=Card _ _ _ _ 20 proteins protein NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 U937 U937 NUM CD NumType=Card _ _ _ _ 23 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10620 # text = NF-IL6 is an important transcriptional regulator of genes induced in activated monocytes/macrophages, and NF-IL6 is the only CCAAT/enhancer-binding protein (C/EBP) family member whose steady-state mRNA levels increase upon activation of monocytes (1). 1 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 important important ADJ JJ Degree=Pos _ _ _ _ 7 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 8 regulator regulator NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 only only ADJ JJ Degree=Pos _ _ _ _ 25 CCAAT Ccaat NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 / / PUNCT , _ _ _ _ SpaceAfter=No 27 enhancer-binding enhancer-binding VERB VBG VerbForm=Ger _ _ _ _ 28 protein protein NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 C/ Cith NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 EBP EBP NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 family family NOUN NN Number=Sing _ _ _ _ 34 member member NOUN NN Number=Sing _ _ _ _ 35 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 36 steady steady ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 state state NOUN NN Number=Sing _ _ _ _ 39 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 40 levels level NOUN NNS Number=Plur _ _ _ _ 41 increase increase NOUN NN Number=Sing _ _ _ _ 42 upon upon ADP IN _ _ _ _ _ 43 activation activation NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 10621 # text = We show that increased transcription of the NF-IL6 gene is responsible, at least in part, for induction of NF-IL6 mRNA following activation of U937 promonocytic cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 responsible responsible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 at at ADV RB _ _ _ _ _ 16 least least ADV RBS Degree=Sup _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 part part NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 induction induction NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 26 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 27 following follow VERB VBG VerbForm=Ger _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 U937 U937 NUM CD NumType=Card _ _ _ _ 31 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 10622 # text = We have identified a 104-bp minimal promoter region of the NF-IL6 gene that is sufficient for basal and activation-dependent induction of transcription in U937 cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 104 104 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 bp bp NOUN NN Number=Sing _ _ _ _ 8 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 region region NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 IL6 Il6 PROPN NNP Number=Sing _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 basal basal NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 26 induction induction NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 U937 U937 NUM CD NumType=Card _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 10623 # text = This region contains binding sites for the cAMP response element-binding protein/activation transcription factor (CREB/ATF) and Sp1 families of transcription factors. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 region region NOUN NN Number=Sing _ _ _ _ 3 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 sites site NOUN NNS Number=Plur _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 cAMP camp NOUN NN Number=Sing _ _ _ _ 9 response response NOUN NN Number=Sing _ _ _ _ 10 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 binding bind VERB VBG VerbForm=Ger _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 ATF ATF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 25 families family NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 10624 # text = Each site is functionally important and contributes independently to transcription of the NF-IL6 gene in U937 cells. 1 Each each DET DT _ _ _ _ _ 2 site site NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 functionally functionally ADV RB _ _ _ _ _ 5 important important ADJ JJ Degree=Pos _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 contributes contribute VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 independently independently ADV RB _ _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 IL6 IL6 PROPN NNP Number=Sing _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 U937 U937 NUM CD NumType=Card _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10625 # text = Document 0030012260 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012260 0030012260 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10626 # text = Identification of nucleotide sequences that regulate transcription of the MCF13 murine leukemia virus long terminal repeat in activated T cells. 1 Identification identification NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 nucleotide nucleotide ADJ JJ Degree=Pos _ _ _ _ 4 sequences sequence NOUN NNS Number=Plur _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 MCF Mcf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 13 13 NUM CD NumType=Card _ _ _ _ 12 murine murine NOUN NN Number=Sing _ _ _ _ 13 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 14 virus virus NOUN NN Number=Sing _ _ _ _ 15 long long ADV RB Degree=Pos _ _ _ _ 16 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 17 repeat repeat NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10627 # text = The region downstream of the enhancer (DEN) of the long terminal repeat of the mink cell focus-forming murine leukemia virus is important for viral pathogenicity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 region region NOUN NN Number=Sing _ _ _ _ 3 downstream downstream NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 DEN DEN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 long long ADJ JJ Degree=Pos _ _ _ _ 13 terminal terminal NOUN NN Number=Sing _ _ _ _ 14 repeat repeat NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 mink mink NOUN NN Number=Sing _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 focus focus NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 forming form VERB VBG VerbForm=Ger _ _ _ _ 22 murine murine NOUN NN Number=Sing _ _ _ _ 23 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 24 virus virus NOUN NN Number=Sing _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 important important ADJ JJ Degree=Pos _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 viral viral ADJ JJ Degree=Pos _ _ _ _ 29 pathogenicity pathogenicity NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 10628 # text = Another important activity of DEN is its control of transcription in activated T cells, and we have determined that an NF-kappaB site is critical for this activity. 1 Another another DET DT _ _ _ _ _ 2 important important ADJ JJ Degree=Pos _ _ _ _ 3 activity activity NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 DEN DEN PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 8 control control NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 18 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 25 site site NOUN NN Number=Sing _ _ _ _ 26 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 critical critical ADJ JJ Degree=Pos _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 30 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10629 # text = Document 0030012261 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012261 0030012261 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10630 # text = Lymphoid specific gene expression of the adenovirus early region 3 promoter is mediated by NF-kappa B binding motifs. 1 Lymphoid Lymphoid ADJ JJ Degree=Pos _ _ _ _ 2 specific specific ADJ JJ Degree=Pos _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 adenovirus adenovirus ADJ JJ Degree=Pos _ _ _ _ 8 early early ADJ JJ Degree=Pos _ _ _ _ 9 region region NOUN NN Number=Sing _ _ _ _ 10 3 3 NUM CD NumType=Card _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10631 # text = A primary site of infection by human adenoviruses is lymphoid cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 primary primary ADJ JJ Degree=Pos _ _ _ _ 3 site site NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 infection infection NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 adenoviruses adenoviruse NOUN NNS Number=Plur _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 10632 # text = However, analysis of the viral control elements and the cellular factors that regulate adenoviral gene expression in lymphocytes has not been reported. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 viral viral ADJ JJ Degree=Pos _ _ _ _ 7 control control NOUN NN Number=Sing _ _ _ _ 8 elements element NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 adenoviral adenoviral ADJ JJ Degree=Pos _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 20 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 23 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 10633 # text = The adenovirus early region 3 (ES) gene products are involved in the maintenance of viral persistence by complexing with the class I MHC antigens, thus preventing their cell surface expression with a resultant decrease in host immunologic destruction. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 adenovirus adenovirus ADJ JJ Degree=Pos _ _ _ _ 3 early early ADJ JJ Degree=Pos _ _ _ _ 4 region region NOUN NN Number=Sing _ _ _ _ 5 3 3 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 ES ES NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 products product NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 involved involved ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 maintenance maintenance NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 viral viral ADJ JJ Degree=Pos _ _ _ _ 18 persistence persistence NOUN NN Number=Sing _ _ _ _ 19 by by SCONJ IN _ _ _ _ _ 20 complexing complex VERB VBG VerbForm=Ger _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 class class NOUN NN Number=Sing _ _ _ _ 24 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 25 MHC MHC PROPN NNP Number=Sing _ _ _ _ 26 antigens antigens NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 thus thus ADV RB _ _ _ _ _ 29 preventing prevent VERB VBG VerbForm=Ger _ _ _ _ 30 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 surface surface NOUN NN Number=Sing _ _ _ _ 33 expression expression NOUN NN Number=Sing _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 resultant resultant ADJ JJ Degree=Pos _ _ _ _ 37 decrease decrease NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 host host NOUN NN Number=Sing _ _ _ _ 40 immunologic immunologic ADJ JJ Degree=Pos _ _ _ _ 41 destruction destruction NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 10634 # text = To determine whether different cellular factors were involved in E3 regulation in lymphocytes as compared with HeLa cells, both DNA binding and transfection analysis with the E3 promoter in both cell types were performed. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 different different ADJ JJ Degree=Pos _ _ _ _ 5 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 6 factors factor NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 involved involved ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 E3 E3 NUM CD NumType=Card _ _ _ _ 11 regulation regulation NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 14 as as SCONJ IN _ _ _ _ _ 15 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 both both CCONJ CC _ _ _ _ _ 21 DNA dna NOUN NN Number=Sing _ _ _ _ 22 binding binding NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 transfection transfection NOUN NN Number=Sing _ _ _ _ 25 analysis analysis NOUN NN Number=Sing _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 E3 E3 NOUN NN Number=Sing _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 both both DET DT _ _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 types type NOUN NNS Number=Plur _ _ _ _ 34 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 performed perform VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 10635 # text = These studies detected two novel domains referred to as L1 and L2 with a variety of lymphoid but not HeLa extracts. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 detected detect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 novel novel NOUN NN Number=Sing _ _ _ _ 6 domains domain NOUN NNS Number=Plur _ _ _ _ 7 referred refer VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 as as ADP IN _ _ _ _ _ 10 L1 L1 PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 L2 L2 NUM CD NumType=Card _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 variety variety NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 lymphoid lymphoid NOUN NN Number=Sing _ _ _ _ 18 but but CCONJ CC _ _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 HeLa Hela PROPN NNP Number=Sing _ _ _ _ 21 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10636 # text = Each of these domains possessed strong homology to motifs previously found to bind the cellular factor NF-kappa B. 1 Each each DET DT _ _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 domains domains NOUN NNS Number=Plur _ _ _ _ 5 possessed possess VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 strong strong ADJ JJ Degree=Pos _ _ _ _ 7 homology homology NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 motifs motif NOUN NNS Number=Plur _ _ _ _ 10 previously previously ADV RB _ _ _ _ _ 11 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 bind bind VERB VB VerbForm=Inf _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 10637 # text = Transfections of E3 constructs linked to the chloramphenicol acetyltransferase gene revealed that mutagenesis of the distal NF-kappa B motif (L2) had minimal effects on promoter expression in HeLa cells, but resulted in dramatic decreases in expression by lymphoid cells. 1 Transfections Transfection NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 E3 E3 NUM CD NumType=Card _ _ _ _ 4 constructs construct NOUN NNS Number=Plur _ _ _ _ 5 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 9 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 13 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 distal distal ADJ JJ Degree=Pos _ _ _ _ 17 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 motif motif NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 L2 l2 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 27 effects effect NOUN NNS Number=Plur _ _ _ _ 28 on on ADP IN _ _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 but but CCONJ CC _ _ _ _ _ 36 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 dramatic dramatic ADJ JJ Degree=Pos _ _ _ _ 39 decreases decrease NOUN NNS Number=Plur _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 expression expression NOUN NN Number=Sing _ _ _ _ 42 by by ADP IN _ _ _ _ _ 43 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 10638 # text = In contrast, mutagenesis of proximal NF-kappa B motif (L1) had minimal effects on gene expression in both HeLa cells and lymphoid cells but resulted in a small, but reproducible, increase in gene expression in lymphoid cells when coupled to the L2 mutation. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 7 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 motif motif NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 L1 L1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 17 effects effect NOUN NNS Number=Plur _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 both both DET DT _ _ _ _ _ 23 HeLa Hela PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 but but CCONJ CC _ _ _ _ _ 29 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 small small ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 but but CCONJ CC _ _ _ _ _ 35 reproducible reproducible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 increase increase NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 gene gene ADJ JJ Degree=Pos _ _ _ _ 40 expression expression NOUN NN Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ _ 44 when when ADV WRB PronType=Int _ _ _ _ 45 coupled couple VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 to to ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 L2 l2 NOUN NN Number=Sing _ _ _ _ 49 mutation mutation NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 10639 # text = Reversing the position and subsequent mutagenesis of the L1 and L2 domains indicated that the primary sequence of these motifs rather than their position in the E3 promoter was critical for regulating gene expression. 1 Reversing Reverse VERB VBG VerbForm=Ger _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 position position NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 6 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 L1 L1 PROPN NNP Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 L2 L2 NUM CD NumType=Card _ _ _ _ 12 domains domain NOUN NNS Number=Plur _ _ _ _ 13 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 primary primary ADJ JJ Degree=Pos _ _ _ _ 17 sequence sequence NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 20 motifs motif NOUN NNS Number=Plur _ _ _ _ 21 rather rather ADV RB _ _ _ _ _ 22 than than ADP IN _ _ _ _ _ 23 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 position position NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 E3 E3 NOUN NN Number=Sing _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 critical critical ADJ JJ Degree=Pos _ _ _ _ 31 for for SCONJ IN _ _ _ _ _ 32 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 33 gene gene ADJ JJ Degree=Pos _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 10640 # text = (ABSTRACT TRUNCATED AT 250 WORDS) 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 ABSTRACT ABSTRACT X GW _ _ _ _ _ 3 TRUNCATED Truncate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 AT at ADV RB _ _ _ _ _ 5 250 250 NUM CD NumType=Card _ _ _ _ 6 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10641 # text = Document 0030012262 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012262 0030012262 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10642 # text = The Megakaryocyte/Platelet-specific enhancer of the alpha2beta1 integrin gene: two tandem AP1 sites and the mitogen-activated protein kinase signaling cascade. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Megakaryocyte Megakaryocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 / / PUNCT , _ _ _ _ SpaceAfter=No 4 Platelet Platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 specific specific ADJ JJ Degree=Pos _ _ _ _ 7 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 alpha2 alpha2 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 beta1 beta1 NUM CD NumType=Card _ _ _ _ 12 integrin integrin NOUN NN Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 : : PUNCT : _ _ _ _ _ 15 two two NUM CD NumType=Card _ _ _ _ 16 tandem tandem NOUN NN Number=Sing _ _ _ _ 17 AP1 AP1 NUM CD NumType=Card _ _ _ _ 18 sites site NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 mitogen mitogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 protein protein NOUN NN Number=Sing _ _ _ _ 25 kinase kinase NOUN NN Number=Sing _ _ _ _ 26 signaling signaling VERB VBG VerbForm=Ger _ _ _ _ 27 cascade cascade NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10643 # text = The alpha2beta1 integrin, a collagen receptor on platelets and megakaryocytes, is required for normal platelet function. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 alpha2 alpha2 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 beta1 beta1 NUM CD NumType=Card _ _ _ _ 4 integrin integrin NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 collagen collagen ADJ JJ Degree=Pos _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 platelets platelet NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 megakaryocytes megakaryocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 normal normal ADJ JJ Degree=Pos _ _ _ _ 18 platelet platelet NOUN NN Number=Sing _ _ _ _ 19 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 10644 # text = Transcriptional regulation of the alpha2 integrin gene in cells undergoing megakaryocytic differentiation requires a core promoter between bp -30 and -92, a silencer between bp -92 and -351, and megakaryocytic enhancers in the distal 5' flank. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 alpha2 alpha2 NUM CD NumType=Card _ _ _ _ 6 integrin integrin ADJ JJ Degree=Pos _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 undergoing undergo VERB VBG VerbForm=Ger _ _ _ _ 11 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 12 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 13 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 core core NOUN NN Number=Sing _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 between between ADP IN _ _ _ _ _ 18 bp bp NOUN NN Number=Sing _ _ _ _ 19 -30 -30 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 - - SYM SYM _ _ _ _ SpaceAfter=No 22 92 92 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 silencer silencer NOUN NN Number=Sing _ _ _ _ 26 between between ADP IN _ _ _ _ _ 27 bp bp NOUN NN Number=Sing _ _ _ _ 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 92 92 NUM CD NumType=Card _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 - - SYM SYM _ _ _ _ SpaceAfter=No 32 351 351 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 36 enhancers enhancer NOUN NNS Number=Plur _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 distal distal ADJ JJ Degree=Pos _ _ _ _ 40 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 ' ' PUNCT '' _ _ _ _ _ 42 flank flank NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 10645 # text = We have now identified a 229-bp region of the distal 5' flank of the alpha2 integrin gene required for high-level enhancer activity in cells with megakaryocytic features. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 now now ADV RB _ _ _ _ _ 4 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 229 229 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 bp bp NOUN NN Number=Sing _ _ _ _ 9 region region NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 distal distal ADJ JJ Degree=Pos _ _ _ _ 13 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ' ' PUNCT '' _ _ _ _ _ 15 flank flank NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 alpha2 alpha2 NUM CD NumType=Card _ _ _ _ 19 integrin integrin ADJ JJ Degree=Pos _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 level level NOUN NN Number=Sing _ _ _ _ 26 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 32 features feature NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 10646 # text = Two tandem AP1 binding sites with dyad symmetry are required for enhancer activity and for DNA-protein complex formation with members of the c-fos/c-jun family. 1 Two two NUM CD NumType=Card _ _ _ _ 2 tandem tandem NOUN NN Number=Sing _ _ _ _ 3 AP1 AP1 NOUN NN Number=Sing _ _ _ _ 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 sites site NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 dyad dyad NOUN NN Number=Sing _ _ _ _ 8 symmetry symmetry NOUN NN Number=Sing _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 enhancer enhancer ADJ JJR Degree=Cmp _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 complex complex NOUN NN Number=Sing _ _ _ _ 20 formation formation NOUN NN Number=Sing _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 members member NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 c- c- SYM SYM _ _ _ _ SpaceAfter=No 26 fos/c fos/c ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 -jun -jun ADJ JJ Degree=Pos _ _ _ _ 28 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 10647 # text = The requirement for AP1 activation suggested a role for the mitogen-activated protein kinase (MAPK) signaling pathway in regulating alpha2 integrin gene expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 requirement requirement NOUN NN Number=Sing _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 AP1 AP1 NUM CD NumType=Card _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 mitogen mitogen VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 kinase kinase NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 MAPK MAPK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 signaling signale NOUN NN Number=Sing _ _ _ _ 20 pathway pathway NOUN NN Number=Sing _ _ _ _ 21 in in SCONJ IN _ _ _ _ _ 22 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 23 alpha2 alpha2 NUM CD NumType=Card _ _ _ _ 24 integrin integrin NOUN NN Number=Sing _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 10648 # text = Inhibition of the MAP kinase cascade with PD98059, a specific inhibitor of MAPK kinase 1, prevented the expression of the alpha2 integrin subunit in cells induced to become megakaryocytic. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 MAP map PROPN NNP Number=Sing _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ _ 6 cascade cascade NOUN NN Number=Sing _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 PD98059 PD98059 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 specific specific ADJ JJ Degree=Pos _ _ _ _ 12 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 MAPK MAPK PROPN NNP Number=Sing _ _ _ _ 15 kinase kinase NOUN NN Number=Sing _ _ _ _ 16 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 alpha2 alpha2 NUM CD NumType=Card _ _ _ _ 24 integrin integrin ADJ JJ Degree=Pos _ _ _ _ 25 subunit subunit NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 to to PART TO _ _ _ _ _ 30 become become VERB VB VerbForm=Inf _ _ _ _ 31 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 10649 # text = We provide a model of megakaryocytic differentiation in which expression of the alpha2 integrin gene requires signaling via the MAP kinase pathway to activate two tandem AP1 binding sites in the alpha2 integrin enhancer. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 model model NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 7 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 which which PRON WDT PronType=Rel _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 alpha2 alpha2 NOUN NN Number=Sing _ _ _ _ 14 integrin integrin ADP IN _ _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 requires require NOUN NNS Number=Plur _ _ _ _ 17 signaling signale VERB VBG VerbForm=Ger _ _ _ _ 18 via via ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 MAP map PROPN NNP Number=Sing _ _ _ _ 21 kinase kinase NOUN NN Number=Sing _ _ _ _ 22 pathway pathway NOUN NN Number=Sing _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 activate activate VERB VB VerbForm=Inf _ _ _ _ 25 two two NUM CD NumType=Card _ _ _ _ 26 tandem tandem NOUN NN Number=Sing _ _ _ _ 27 AP1 AP1 NOUN NN Number=Sing _ _ _ _ 28 binding binding VERB VBG VerbForm=Ger _ _ _ _ 29 sites site NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 alpha2 alpha2 NOUN NN Number=Sing _ _ _ _ 33 integrin integrin ADP IN _ _ _ _ _ 34 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10650 # text = Document 0030012269 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012269 0030012269 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10651 # text = Constitutive NF-kappa B activation, enhanced granulopoiesis, and neonatal lethality in I kappa B alpha-deficient mice. 1 Constitutive Constitutive ADJ JJ Degree=Pos _ _ _ _ 2 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 granulopoiesis granulopoiesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 13 lethality lethality NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 kappa kappa PROPN NNP Number=Sing _ _ _ _ 17 B B PROPN NNP Number=Sing _ _ _ _ 18 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 21 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10652 # text = Transcription factors belonging to the NF-kappa B family are controlled by inhibitory I kappa B proteins, mainly I kappa B alpha and I kappa B beta. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 belonging belong VERB VBG VerbForm=Ger _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 family family NOUN NN Number=Sing _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 kappa kappa X GW _ _ _ _ _ 17 B b ADJ JJ Degree=Pos _ _ _ _ 18 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 mainly mainly ADV RB _ _ _ _ _ 21 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 22 kappa kappa PROPN NNP Number=Sing _ _ _ _ 23 B b PROPN NNP Number=Sing _ _ _ _ 24 alpha alpha PROPN NNP Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 27 kappa kappa X FW Foreign=Yes _ _ _ _ 28 B b ADJ JJ Degree=Pos _ _ _ _ 29 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 10653 # text = Apparently normal at birth, I kappa B alpha-/- mice exhibit severe runting, skin defects, and extensive granulopoiesis postnatally, typically dying by 8 days. 1 Apparently apparently ADV RB _ _ _ _ _ 2 normal normal ADJ JJ Degree=Pos _ _ _ _ 3 at at ADP IN _ _ _ _ _ 4 birth birth NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 kappa kappa X FW Foreign=Yes _ _ _ _ 8 B b ADJ JJ Degree=Pos _ _ _ _ 9 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 -/- -/- PUNCT . _ _ _ _ _ 11 mice mouse NOUN NNS Number=Plur _ _ _ _ 12 exhibit exhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 severe severe ADJ JJ Degree=Pos _ _ _ _ 14 runting runting NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 skin skin NOUN NN Number=Sing _ _ _ _ 17 defects defects NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 extensive extensive ADJ JJ Degree=Pos _ _ _ _ 21 granulopoiesis granulopoiesis NOUN NN Number=Sing _ _ _ _ 22 postnatally postnatally ADV RB _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 typically typically ADV RB _ _ _ _ _ 25 dying die VERB VBG VerbForm=Ger _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 8 8 NUM CD NumType=Card _ _ _ _ 28 days day NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 10654 # text = Hematopoietic tissues from these mice display elevated levels of both nuclear NF-kappa B and mRNAs of some, but not all, genes thought to be regulated by NF-kappa B. NF-kappa B elevation results in these phenotypic abnormalities because mice lacking both I kappa B alpha and the p50 subunit of NF-kappa B show a dramatically delayed onset of abnormalities. 1 Hematopoietic Hematopoietic ADJ JJ Degree=Pos _ _ _ _ 2 tissues tissue NOUN NNS Number=Plur _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 mice mouse NOUN NNS Number=Plur _ _ _ _ 6 display display VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 both both DET DT _ _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 mRNAs mRNA NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 some some DET DT _ _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 but but CCONJ CC _ _ _ _ _ 22 not not ADV RB _ _ _ _ _ 23 all all ADV RB _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 genes gene NOUN NNS Number=Plur _ _ _ _ 26 thought think VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 be be AUX VB VerbForm=Inf _ _ _ _ 29 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 kappa kappa NOUN NN Number=Sing _ _ _ _ 34 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ 36 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 kappa kappa NOUN NN Number=Sing _ _ _ _ 39 B b NOUN NN Number=Sing _ _ _ _ 40 elevation elevation NOUN NN Number=Sing _ _ _ _ 41 results result NOUN NNS Number=Plur _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 44 phenotypic phenotypic ADJ JJ Degree=Pos _ _ _ _ 45 abnormalities abnormality NOUN NNS Number=Plur _ _ _ _ 46 because because SCONJ IN _ _ _ _ _ 47 mice mouse NOUN NNS Number=Plur _ _ _ _ 48 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 49 both both CCONJ CC _ _ _ _ _ 50 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 51 kappa kappa PROPN NNP Number=Sing _ _ _ _ 52 B b PROPN NNP Number=Sing _ _ _ _ 53 alpha alpha PROPN NNP Number=Sing _ _ _ _ 54 and and CCONJ CC _ _ _ _ _ 55 the the DET DT Definite=Def|PronType=Art _ _ _ _ 56 p50 p50 NOUN NN Number=Sing _ _ _ _ 57 subunit subunit NOUN NN Number=Sing _ _ _ _ 58 of of ADP IN _ _ _ _ _ 59 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 60 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 61 kappa kappa PROPN NNP Number=Sing _ _ _ _ 62 B B PROPN NNP Number=Sing _ _ _ _ 63 show show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 64 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 65 dramatically dramatically ADV RB _ _ _ _ _ 66 delayed delayed ADJ JJ Degree=Pos _ _ _ _ 67 onset onset NOUN NN Number=Sing _ _ _ _ 68 of of ADP IN _ _ _ _ _ 69 abnormalities abnormality NOUN NNS Number=Plur _ _ _ SpaceAfter=No 70 . . PUNCT . _ _ _ _ _ # sent_id = 10655 # text = In contrast to hematopoietic cells, I kappa B alpha-/- embryonic fibroblasts show minimal constitutive NF-kappa B, as well as normal signal-dependent NF-kappa B activation that is concomitant with I kappa B beta degradation. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 8 kappa kappa X FW Foreign=Yes _ _ _ _ 9 B b ADJ JJ Degree=Pos _ _ _ _ 10 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 -/- -/- PUNCT . _ _ _ _ _ 12 embryonic embryonic ADJ JJ Degree=Pos _ _ _ _ 13 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 14 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 16 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 17 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 as as ADV RB _ _ _ _ _ 23 well well ADV RB Degree=Pos _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 normal normal ADJ JJ Degree=Pos _ _ _ _ 26 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 29 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappa kappa NOUN NN Number=Sing _ _ _ _ 32 B b NOUN NN Number=Sing _ _ _ _ 33 activation activation NOUN NN Number=Sing _ _ _ _ 34 that that PRON WDT PronType=Rel _ _ _ _ 35 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 concomitant concomitant ADJ JJ Degree=Pos _ _ _ _ 37 with with SCONJ IN _ _ _ _ _ 38 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 39 kappa kappa X FW Foreign=Yes _ _ _ _ 40 B benefit ADJ JJ Degree=Pos _ _ _ _ 41 beta beof NOUN NN Number=Sing _ _ _ _ 42 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 10656 # text = Our results indicate that I kappa b beta, but not I kappa B alpha, is required for the signal-dependent activation of NF-kappa B in fibroblasts. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 b benefit NOUN NN Number=Sing _ _ _ _ 8 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 but but CCONJ CC _ _ _ _ _ 11 not not ADV RB _ _ _ _ _ 12 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ 14 B b PROPN NNP Number=Sing _ _ _ _ 15 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 signal signal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 10657 # text = However, I kappa B alpha is required for the postinduction repression of NF-kappa B in fibroblasts. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 4 kappa kappa X FW Foreign=Yes _ _ _ _ 5 B b ADJ JJ Degree=Pos _ _ _ _ 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 postinduction postinduction NOUN NN Number=Sing _ _ _ _ 12 repression repression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 10658 # text = These results define distinct roles for the two forms of I kappa B and demonstrate the necessity for stringent control of NF-kappa B. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 define define VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 5 roles role NOUN NNS Number=Plur _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 two two NUM CD NumType=Card _ _ _ _ 9 forms form NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 12 kappa kappa PROPN NNP Number=Sing _ _ _ _ 13 B B PROPN NNP Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 necessity necessity NOUN NN Number=Sing _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 stringent stringent ADJ JJ Degree=Pos _ _ _ _ 20 control control NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ 25 B. B. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10659 # text = Document 0030012274 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012274 0030012274 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10660 # text = The evolutionarily conserved sequence upstream of the human Ig heavy chain S gamma 3 region is an inducible promoter: synergistic activation by CD40 ligand and IL-4 via cooperative NF-kappa B and STAT-6 binding sites. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 evolutionarily evolutionarily ADV RB Degree=Pos _ _ _ _ 3 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 sequence sequence NOUN NN Number=Sing _ _ _ _ 5 upstream upstream NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 Ig ig PROPN NNP Number=Sing _ _ _ _ 10 heavy heavy ADJ JJ Degree=Pos _ _ _ _ 11 chain chain NOUN NN Number=Sing _ _ _ _ 12 S 's PART POS _ _ _ _ _ 13 gamma gamma NOUN NN Number=Sing _ _ _ _ 14 3 3 NUM CD NumType=Card _ _ _ _ 15 region region NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 : : PUNCT : _ _ _ _ _ 21 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 25 ligand ligand PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 4 4 NUM CD NumType=Card _ _ _ _ 30 via via ADP IN _ _ _ _ _ 31 cooperative cooperative ADJ JJ Degree=Pos _ _ _ _ 32 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappa kappa PROPN NNP Number=Sing _ _ _ _ 35 B b PROPN NNP Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 STAT Stat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT , _ _ _ _ SpaceAfter=No 39 6 6 NUM CD NumType=Card _ _ _ _ 40 binding binding VERB VBG VerbForm=Ger _ _ _ _ 41 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10661 # text = Germline C gamma gene transcription is a crucial event in the process that leads to switch DNA recombination to IgG, but its regulation in the human is poorly understood. 1 Germline Germline PROPN NNP Number=Sing _ _ _ _ 2 C C PROPN NNP Number=Sing _ _ _ _ 3 gamma gamma NOUN NN Number=Sing _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 9 event event NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 process process NOUN NN Number=Sing _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 switch switch VERB VB VerbForm=Inf _ _ _ _ 17 DNA dna NOUN NN Number=Sing _ _ _ _ 18 recombination recombination NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 IgG IgG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 regulation regulation NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 human human NOUN NN Number=Sing _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 poorly poorly ADV RB _ _ _ _ _ 30 understood understand VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 10662 # text = We took advantage of our monoclonal model of germinal center B cell differentiation, IgM+ IgD+ CL-01 cells, to define the role of the I gamma 3 evolutionarily conserved sequence (ECS) in the germline transcriptional activation of the human C gamma 3 gene. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 took take VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 advantage advantage NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 6 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 7 model model NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 germinal germinal ADJ JJ Degree=Pos _ _ _ _ 10 center center NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 IgM IgM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 + + SYM SYM _ _ _ _ _ 17 IgD IgD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 + + SYM SYM _ _ _ _ _ 19 CL CL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 01 01 NUM CD NumType=Card _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 define define VERB VB VerbForm=Inf _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 role role NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 I I PROPN NNP Number=Sing _ _ _ _ 31 gamma gamma NOUN NN Number=Sing _ _ _ _ 32 3 3 NUM CD NumType=Card _ _ _ _ 33 evolutionarily evolutionarily ADV RB _ _ _ _ _ 34 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 sequence sequence NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 ECS ECS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 germline germline NOUN NN Number=Sing _ _ _ _ 42 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 43 activation activation NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 human human ADJ JJ Degree=Pos _ _ _ _ 47 C C PROPN NNP Number=Sing _ _ _ _ 48 gamma gamma NOUN NN Number=Sing _ _ _ _ 49 3 3 NUM CD NumType=Card _ _ _ _ 50 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 10663 # text = The I gamma 3 ECS lies upstream of the major I gamma 3 transcription initiation site and displays more than 90% identity with the corresponding human I gamma 1, I gamma 2, and I gamma 4 regions. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 3 gamma gamma NOUN NN Number=Sing _ _ _ _ 4 3 3 NUM CD NumType=Card _ _ _ _ 5 ECS ECS PROPN NNP Number=Sing _ _ _ _ 6 lies lie VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 upstream upstream NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 major major ADJ JJ Degree=Pos _ _ _ _ 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 12 gamma gamma NOUN NN Number=Sing _ _ _ _ 13 3 3 NUM CD NumType=Card _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 initiation initiation NOUN NN Number=Sing _ _ _ _ 16 site site NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 displays display VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 more more ADJ JJR Degree=Cmp _ _ _ _ 20 than than ADP IN _ _ _ _ _ 21 90 90 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 % % SYM NN Number=Sing _ _ _ _ 23 identity identity NOUN NN Number=Sing _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 corresponding corresponding NOUN NN Number=Sing _ _ _ _ 27 human human AUX MD VerbForm=Fin _ _ _ _ 28 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 29 gamma gamma NOUN NN Number=Sing _ _ _ _ 30 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 33 gamma gamma NOUN NN Number=Sing _ _ _ _ 34 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 38 gamma gamma NOUN NN Number=Sing _ _ _ _ 39 4 4 NUM CD NumType=Card _ _ _ _ 40 regions region NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 10664 # text = Reporter luciferase gene vectors containing the human gamma 3 ECS were used to transfect CL-01 cells, which have been shown to undergo Smu-->S gamma 3 DNA recombination, upon engagement of CD40 by CD40 ligand (CD40L) and exposure to IL-4. 1 Reporter reporter NOUN NN Number=Sing _ _ _ _ 2 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ _ 4 vectors vector NOUN NNS Number=Plur _ _ _ _ 5 containing contain VERB VBG VerbForm=Ger _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 gamma gamma NOUN NN Number=Sing _ _ _ _ 9 3 3 NUM CD NumType=Card _ _ _ _ 10 ECS Ec PROPN NNP Number=Sing _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 transfect transfect VERB VB VerbForm=Inf _ _ _ _ 15 CL Cl NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 01 01 NUM CD NumType=Card _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 which which PRON WDT PronType=Rel _ _ _ _ 21 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 23 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 undergo undergo PROPN NNP Number=Sing _ _ _ _ 26 Smu Smu PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 --> --> PUNCT , _ _ _ _ SpaceAfter=No 28 S s PROPN NNP Number=Sing _ _ _ _ 29 gamma gamma NOUN NN Number=Sing _ _ _ _ 30 3 3 NUM CD NumType=Card _ _ _ _ 31 DNA dna NOUN NN Number=Sing _ _ _ _ 32 recombination recombination NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 upon upon ADP IN _ _ _ _ _ 35 engagement engagement NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 CD40 CD40 NUM CD NumType=Card _ _ _ _ 38 by by ADP IN _ _ _ _ _ 39 CD40 CD40 NUM CD NumType=Card _ _ _ _ 40 ligand ligand NOUN NN Number=Sing _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 CD40L CD40L NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 exposure exposure NOUN NN Number=Sing _ _ _ _ 46 to to ADP IN _ _ _ _ _ 47 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 10665 # text = In these transfected CL-01 cells, CD40:CD40L engagement and exposure to IL-4 synergistically induced gamma 3 ECS-dependent luciferase reporter gene activation. 1 In in ADP IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 CL CL NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 01 01 NUM CD NumType=Card _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 CD40:CD40L Cd40:cd40l PROPN NNP Number=Sing _ _ _ _ 10 engagement engagement NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 exposure exposure NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - SYM SYM _ _ _ _ SpaceAfter=No 16 4 for NUM CD NumType=Card _ _ _ _ 17 synergistically synergistically ADV RB _ _ _ _ _ 18 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 gamma gamma NOUN NN Number=Sing _ _ _ _ 20 3 3 NUM CD NumType=Card _ _ _ _ 21 ECS ECS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - SYM SYM _ _ _ _ SpaceAfter=No 23 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 24 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 25 reporter reporter NOUN NN Number=Sing _ _ _ _ 26 gene gene NOUN NN Number=Sing _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 10666 # text = Targeted mutational analysis demonstrated that a tandem NF-kappa B/Rel binding motif is critical for the gamma 3 ECS responsiveness to both CD40L and IL-4, while a STAT-6-binding site is additionally required for IL-4 inducibility. 1 Targeted target VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 mutational mutational ADJ JJ Degree=Pos _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 tandem tandem NOUN NN Number=Sing _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 Rel Rel PROPN NNP Number=Sing _ _ _ _ 14 binding binding VERB VBG VerbForm=Ger _ _ _ _ 15 motif motif NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 critical critical ADJ JJ Degree=Pos _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 gamma gamma NOUN NN Number=Sing _ _ _ _ 21 3 3 NUM CD NumType=Card _ _ _ _ 22 ECS ECS PROPN NNP Number=Sing _ _ _ _ 23 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 both both CCONJ CC _ _ _ _ _ 26 CD40L CD40L PROPN NNP Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 while while SCONJ IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 STAT Stat NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 binding binding VERB VBG VerbForm=Ger _ _ _ _ 39 site site NOUN NN Number=Sing _ _ _ _ 40 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 41 additionally additionally ADV RB _ _ _ _ _ 42 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 43 for for ADP IN _ _ _ _ _ 44 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT , _ _ _ _ SpaceAfter=No 46 4 4 NUM CD NumType=Card _ _ _ _ 47 inducibility inducibility NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 10667 # text = Electrophoretic mobility shift assays showed that p50/p65/c-Rel and STAT-6 are effectively induced by CD40L and IL-4, respectively, and bind to specific DNA motifs within the ECS. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assays assays ADV RB _ _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 p50/p65/c p50/p65/c NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Rel Rel NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 STAT Stat NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 6 6 NUM CD NumType=Card _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 effectively effectively ADV RB _ _ _ _ _ 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 CD40L Cd40l PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 bind bind VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 specific specific ADJ JJ Degree=Pos _ _ _ _ 30 DNA dna NOUN NN Number=Sing _ _ _ _ 31 motifs motif NOUN NNS Number=Plur _ _ _ _ 32 within within ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 ECS ECS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 10668 # text = These partially overlapping CD40L and IL-4 responsive elements are functionally cooperative as the disruption of one of them prevents synergistic promoter activation. 1 These these PRON DT Number=Plur|PronType=Dem _ _ _ _ 2 partially partially ADV RB _ _ _ _ _ 3 overlapping overlapp VERB VBG VerbForm=Ger _ _ _ _ 4 CD40L Cd40l PROPN NNP Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 4 4 NUM CD NumType=Card _ _ _ _ 9 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 10 elements element NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 functionally functionally ADV RB _ _ _ _ _ 13 cooperative cooperative ADJ JJ Degree=Pos _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 disruption disruption NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 one one NUM CD NumType=Card _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ _ 21 prevents prevent NOUN NNS Number=Plur _ _ _ _ 22 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 10669 # text = Thus, the gamma 3 ECS is an inducible promoter containing cis elements that critically mediate CD40L and IL-4-triggered transcriptional activation of the human C gamma 3 gene. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 gamma gamma NOUN NN Number=Sing _ _ _ _ 5 3 3 NUM CD NumType=Card _ _ _ _ 6 ECS ECS PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 containing contain VERB VBG VerbForm=Ger _ _ _ _ 12 cis cis NOUN NN Number=Sing _ _ _ _ 13 elements element NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 critically critically ADV RB _ _ _ _ _ 16 mediate mediate ADJ JJ Degree=Pos _ _ _ _ 17 CD40L Cd40l NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 triggered trigger VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 C C PROPN NNP Number=Sing _ _ _ _ 30 gamma gamma NOUN NN Number=Sing _ _ _ _ 31 3 3 NUM CD NumType=Card _ _ _ _ 32 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10670 # text = Document 0030012283 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012283 0030012283 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10671 # text = Transcriptional control of the IL-5 gene by human helper T cells: IL-5 synthesis is regulated independently from IL-2 or IL-4 synthesis. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 control control NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 5 5 NUM CD NumType=Card _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 helper helper NOUN NN Number=Sing _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 : : PUNCT : _ _ _ _ _ 15 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 5 5 NUM CD NumType=Card _ _ _ _ 18 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 independently independently ADV RB _ _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 4 4 NUM CD NumType=Card _ _ _ _ 30 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10672 # text = BACKGROUND: IL-5 is fundamentally involved in eosinophilic inflammation. 1 BACKGROUND background ADP IN _ _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 5 5 NUM CD NumType=Card _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 fundamentally fundamentally ADV RB _ _ _ _ _ 8 involved involved ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 eosinophilic eosinophilic ADJ JJ Degree=Pos _ _ _ _ 11 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 10673 # text = Control of IL-5 production may be effective for the management of allergic diseases. 1 Control Control PROPN NNP Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 5 5 NUM CD NumType=Card _ _ _ _ 6 production production NOUN NN Number=Sing _ _ _ _ 7 may may AUX MD VerbForm=Fin _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 effective effective ADJ JJ Degree=Pos _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 management management NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 allergic allergic ADJ JJ Degree=Pos _ _ _ _ 15 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 10674 # text = OBJECTIVE: 1 OBJECTIVE objective NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 10675 # text = We aimed to find the transcriptional mechanisms that regulate the IL-5 gene to selectively control IL-5 synthesis. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 aimed aim VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 find find VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 5 5 NUM CD NumType=Card _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 selectively selectively ADV RB _ _ _ _ _ 17 control control VERB VB VerbForm=Inf _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 5 5 NUM CD NumType=Card _ _ _ _ 21 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10676 # text = METHODS: Allergen-specific T-cell clones and T-cell hybridomas were established from the peripheral blood lymphocytes of patients with asthma, and the transcriptional regulation of the IL-5 gene was investigated with transient transfection and electrophoretic mobility shift analysis. 1 METHODS method NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Allergen Allergen PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 clones clone NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 hybridomas hybridoma NOUN NNS Number=Plur _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 established establish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 18 blood blood NOUN NN Number=Sing _ _ _ _ 19 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 patients patient NOUN NNS Number=Plur _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 asthma asthma NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 28 regulation regulation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 5 5 NUM CD NumType=Card _ _ _ _ 34 gene gene NOUN NN Number=Sing _ _ _ _ 35 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 36 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 transient transient NOUN NN Number=Sing _ _ _ _ 39 transfection transfection NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 42 mobility mobility NOUN NN Number=Sing _ _ _ _ 43 shift shift NOUN NN Number=Sing _ _ _ _ 44 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 10677 # text = RESULTS: A human IL-5 promoter/enhancer-luciferase gene construct, pIL-5(-511)Luc, was transcribed on activation of IL-5-producing T-cell clones, but not IL-5-nonproducing clones. 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 5 5 NUM CD NumType=Card _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 / / PUNCT , _ _ _ _ SpaceAfter=No 10 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 construct construct NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 pIL pil NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 (-511 (-511 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 Luc Luc NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 producing produce VERB VBG VerbForm=Ger _ _ _ _ 33 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 but but CCONJ CC _ _ _ _ _ 38 not not ADV RB _ _ _ _ _ 39 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 nonproducing nonproducing VERB VBG VerbForm=Ger _ _ _ _ 44 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 10678 # text = pIL-5(-511)Luc was transcribed by T-cell hybridomas derived from fusion between IL-5-producing T-cell clones and an IL-5 gene-nonexpressing T-cell line, but not by hybridomas derived from IL-5-nonproducing T-cell clones. 1 pIL pil NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 (-511 (-511 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 6 Luc Luc NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 hybridomas hybridoma AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 fusion fusion NOUN NN Number=Sing _ _ _ _ 16 between between ADP IN _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 producing produce VERB VBG VerbForm=Ger _ _ _ _ 22 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 clones clone NOUN NNS Number=Plur _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 5 5 NUM CD NumType=Card _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 nonexpressing nonexpresse VERB VBG VerbForm=Ger _ _ _ _ 33 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 but but CCONJ CC _ _ _ _ _ 38 not not ADV RB _ _ _ _ _ 39 by by ADP IN _ _ _ _ _ 40 hybridomas hybridoma NOUN NNS Number=Plur _ _ _ _ 41 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 from from ADP IN _ _ _ _ _ 43 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 nonproducing nonproducing NOUN NN Number=Sing _ _ _ _ 48 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 cell cell NOUN NN Number=Sing _ _ _ _ 50 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 10679 # text = IL-5 synthesis was not only induced by T-cell receptor stimulation but also by IL-2 receptor stimulation. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 5 5 NUM CD NumType=Card _ _ _ _ 4 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 5 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 not not ADV RB _ _ _ _ _ 7 only only ADV RB _ _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 also also ADV RB _ _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ _ 21 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10680 # text = Binding of NF-AT, NF-kappaB, and AP-1 was induced by T-cell receptor (TcR) stimulation, although there was no significant upregulation of binding by IL-2 stimulation. 1 Binding binding NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 TcR TcR NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 although although SCONJ IN _ _ _ _ _ 27 there there PRON EX _ _ _ _ _ 28 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 29 no no DET DT _ _ _ _ _ 30 significant significant ADJ JJ Degree=Pos _ _ _ _ 31 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 32 of of SCONJ IN _ _ _ _ _ 33 binding bind VERB VBG VerbForm=Ger _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 2 2 NUM CD NumType=Card _ _ _ _ 38 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 10681 # text = CONCLUSION: IL-5 synthesis by human helper 1 CONCLUSION conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 5 5 NUM CD NumType=Card _ _ _ _ 6 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 helper helper NOUN NN Number=Sing _ _ _ _ # sent_id = 10682 # text = T cells is regulated at the transcriptional level. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 at at ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 8 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 10683 # text = A unique transcriptional mechanism distinct from those regulating the IL-2 or IL-4 genes seems to control the IL-5 gene. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 unique unique ADJ JJ Degree=Pos _ _ _ _ 3 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 4 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 5 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 8 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 4 4 NUM CD NumType=Card _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 control control VERB VB VerbForm=Inf _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 5 5 NUM CD NumType=Card _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 10684 # text = Selective regulation of IL-5 gene transcription may be useful for treating eosinophlic inflammation. 1 Selective selective ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 5 5 NUM CD NumType=Card _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 may may AUX MD VerbForm=Fin _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 useful useful ADJ JJ Degree=Pos _ _ _ _ 12 for for SCONJ IN _ _ _ _ _ 13 treating treat VERB VBG VerbForm=Ger _ _ _ _ 14 eosinophlic eosinophlic ADJ JJ Degree=Pos _ _ _ _ 15 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10685 # text = Document 0030012284 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012284 0030012284 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10686 # text = Monochloramine inhibits phorbol ester-inducible neutrophil respiratory burst activation and T cell interleukin-2 receptor expression by inhibiting inducible protein kinase C activity. 1 Monochloramine Monochloramine PRON PRP _ _ _ _ _ 2 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 4 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 7 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 8 respiratory respiratory NOUN NN Number=Sing _ _ _ _ 9 burst burst NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 T t NUM CD NumType=Card _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 by by SCONJ IN _ _ _ _ _ 20 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 21 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 kinase kinase NOUN NN Number=Sing _ _ _ _ 24 C C NOUN NN Number=Sing _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10687 # text = Monochloramine derivatives are long lived physiological oxidants produced by neutrophils during the respiratory burst. 1 Monochloramine Monochloramine NOUN NN Number=Sing _ _ _ _ 2 derivatives derivative NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 long long ADV RB Degree=Pos _ _ _ _ 5 lived live VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 physiological physiological ADJ JJ Degree=Pos _ _ _ _ 7 oxidants oxidant NOUN NNS Number=Plur _ _ _ _ 8 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 11 during during ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 respiratory respiratory ADJ JJ Degree=Pos _ _ _ _ 14 burst burst NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 10688 # text = The effects of chemically prepared monochloramine (NH2Cl) on protein kinase C (PKC) and PKC-mediated cellular responses were studied in elicited rat peritoneal neutrophils and human Jurkat T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 chemically chemically ADV RB _ _ _ _ _ 5 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 monochloramine monochloramine NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 NH2Cl NH2Cl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 kinase kinase NOUN NN Number=Sing _ _ _ _ 13 C C PROPN NNP Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 22 responses response NOUN NNS Number=Plur _ _ _ _ 23 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 elicited elicit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 rat rat NOUN NN Number=Sing _ _ _ _ 28 peritoneal peritoneal ADJ JJ Degree=Pos _ _ _ _ 29 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 human human ADJ JJ Degree=Pos _ _ _ _ 32 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 33 T T PROPN NNP Number=Sing _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 10689 # text = Neutrophils pretreated with NH2Cl (30-50 microM) showed a marked decrease in the respiratory burst activity induced by phorbol 12-myristate 13-acetate (PMA), which is a potent PKC activator. 1 Neutrophils Neutrophil NOUN NNS Number=Plur _ _ _ _ 2 pretreated pretreate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 NH2Cl NH2Cl PROPN NNP Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 30 30 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 50 50 NUM CD NumType=Card _ _ _ _ 9 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 decrease decrease NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 respiratory respiratory ADJ JJ Degree=Pos _ _ _ _ 18 burst burst NOUN NN Number=Sing _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ _ 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 23 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 myristate myristate NOUN NN Number=Sing _ _ _ _ 26 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 acetate acetate NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 which which PRON WDT PronType=Rel _ _ _ _ 34 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 potent potent NOUN NN Number=Sing _ _ _ _ 37 PKC Pkc NOUN NN Number=Sing _ _ _ _ 38 activator activator NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 10690 # text = These cells, however, were viable and showed a complete respiratory burst upon arachidonic acid stimulation, which induces the respiratory burst by a PKC-independent mechanism. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 however however ADV RB _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 viable viable ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 complete complete ADJ JJ Degree=Pos _ _ _ _ 12 respiratory respiratory NOUN NN Number=Sing _ _ _ _ 13 burst burst NOUN NN Number=Sing _ _ _ _ 14 upon upon ADP IN _ _ _ _ _ 15 arachidonic arachidonic ADJ JJ Degree=Pos _ _ _ _ 16 acid acid ADJ JJ Degree=Pos _ _ _ _ 17 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 respiratory respiratory ADJ JJ Degree=Pos _ _ _ _ 23 burst burst NOUN NN Number=Sing _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 PKC Pkc NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 independent independent ADJ JJ Degree=Pos _ _ _ _ 29 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 10691 # text = The NH2Cl-treated neutrophils showed a decrease in both PKC activity and PMA-induced phosphorylation of a 47-kDa protein, which corresponds to the cytosolic factor of NADPH oxidase, p47(phox). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 NH2Cl NH2Cl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 6 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 decrease decrease NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 both both DET DT _ _ _ _ _ 11 PKC PKC NOUN NN Number=Sing _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 PMA Pma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 47 47 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kDa kDa NOUN NN Number=Sing _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 which which PRON WDT PronType=Rel _ _ _ _ 26 corresponds correspond VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 NADPH NADPH DET DT _ _ _ _ _ 33 oxidase oxidase NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 p47 p47 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 phox phox NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 10692 # text = Jurkat T cells pretreated with NH2Cl (20-70 microM) showed a decrease in the expression of the interleukin-2 receptor alpha chain following PMA stimulation. 1 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 2 T t PROPN NNP Number=Sing _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 pretreated pretreate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 NH2Cl NH2Cl PROPN NNP Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - SYM SYM _ _ _ _ SpaceAfter=No 10 70 70 NUM CD NumType=Card _ _ _ _ 11 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 decrease decrease NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ _ 24 receptor receptor NOUN NN Number=Sing _ _ _ _ 25 alpha alpha NOUN NN Number=Sing _ _ _ _ 26 chain chain NOUN NN Number=Sing _ _ _ _ 27 following follow VERB VBG VerbForm=Ger _ _ _ _ 28 PMA PMA DET DT Definite=Ind|PronType=Art _ _ _ _ 29 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 10693 # text = This was also accompanied by a decrease in both PKC activity and nuclear transcription factor-kappaB activation, also without loss of cell viability. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 decrease decrease NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 both both DET DT _ _ _ _ _ 10 PKC PKC NOUN NN Number=Sing _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappab NOUN NN Number=Sing _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 also also ADV RB _ _ _ _ _ 21 without without ADP IN _ _ _ _ _ 22 loss loss NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 viability viability NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 10694 # text = These results show that NH2Cl inhibits PKC-mediated cellular responses through inhibition of the inducible PKC activity. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 NH2 NH2 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 Cl Cl NOUN NN Number=Sing _ _ _ _ 7 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 8 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 12 responses response NOUN NNS Number=Plur _ _ _ _ 13 through through ADP IN _ _ _ _ _ 14 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 18 PKC PKC NOUN NN Number=Sing _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10695 # text = Document 0030012289 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012289 0030012289 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10696 # text = Expression of IkappaBalpha in the nucleus of human peripheral blood T lymphocytes. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 10 blood blood NOUN NN Number=Sing _ _ _ _ 11 T t NOUN NN Number=Sing _ _ _ _ 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10697 # text = According to current models the inhibitory capacity of I(kappa)B(alpha) would be mediated through the retention of Rel/NF-kappaB proteins in the cytosol. 1 According accord VERB VBG VerbForm=Ger _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 current current ADJ JJ Degree=Pos _ _ _ _ 4 models model NOUN NNS Number=Plur _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 7 capacity capacity NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 I I PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 kappa kappa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 alpha alpha X FW Foreign=Yes _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 would would AUX MD VerbForm=Fin _ _ _ _ 18 be be AUX VB VerbForm=Inf _ _ _ _ 19 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 through through ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 retention retention NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 / / PUNCT , _ _ _ _ SpaceAfter=No 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 29 proteins protein NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 cytosol cytosol NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 10698 # text = However, I(kappa)B(alpha) has also been detected in the nucleus of cell lines and when overexpressed by transient transfection. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 kappa kappa X FW Foreign=Yes _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 7 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 also also ADV RB _ _ _ _ _ 13 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 14 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 lines line NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 when when ADV WRB PronType=Int _ _ _ _ 23 overexpressed overexpress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 transient transient ADJ JJ Degree=Pos _ _ _ _ 26 transfection transfection NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 10699 # text = To gain better insight into the potential role of nuclear I(kappa)B(alpha) in a physiological context we have analysed its presence in the nucleus of human peripheral blood T lymphocytes (PBL). 1 To to PART TO _ _ _ _ _ 2 gain gain VERB VB VerbForm=Inf _ _ _ _ 3 better better ADJ JJR Degree=Cmp _ _ _ _ 4 insight insight NOUN NN Number=Sing _ _ _ _ 5 into into ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 potential potential ADJ JJ Degree=Pos _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 alpha alpha X FW Foreign=Yes _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 physiological physiological ADJ JJ Degree=Pos _ _ _ _ 22 context context NOUN NN Number=Sing _ _ _ _ 23 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 24 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 analysed analyse VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 27 presence presence NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 human human ADJ JJ Degree=Pos _ _ _ _ 33 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 34 blood blood NOUN NN Number=Sing _ _ _ _ 35 T t PROPN NNP Number=Sing _ _ _ _ 36 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 PBL PBL NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 10700 # text = We demonstrate the nuclear localization of I(kappa)B(alpha) in PBL by different techniques: Western blot, indirect immunofluorescence and electron microscopy. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 localization localization NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 alpha alpha INTJ UH _ _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 PBL PBL PROPN NNP Number=Sing _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 different different ADJ JJ Degree=Pos _ _ _ _ 19 techniques technique NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 : : PUNCT : _ _ _ _ _ 21 Western western ADJ JJ Degree=Pos _ _ _ _ 22 blot blot NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 indirect indirect ADJ JJ Degree=Pos _ _ _ _ 25 immunofluorescence immunofluorescence NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 electron electron NOUN NN Number=Sing _ _ _ _ 28 microscopy microscopy NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 10701 # text = Low levels of nuclear 1 Low low VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ # sent_id = 10702 # text = I(kappa)B(alpha) were detected in resting cells whereas a superinduction was obtained after PMA activation. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 kappa kappa X FW Foreign=Yes _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 5 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 alpha alpha X FW Foreign=Yes _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 resting rest VERB VBG VerbForm=Ger _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 whereas whereas SCONJ IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 superinduction superinduction NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 obtained obtain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 after after ADP IN _ _ _ _ _ 20 PMA PMA DET DT Definite=Ind|PronType=Art _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10703 # text = The nuclear pool of I(kappa)B(alpha) showed a higher stability than cytosolic I(kappa)B(alpha) and was partially independent of the resynthesis of the protein. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 pool pool NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 kappa kappa X FW Foreign=Yes _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 alpha alpha X FW Foreign=Yes _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 higher higher ADJ JJR Degree=Cmp _ _ _ _ 16 stability stability NOUN NN Number=Sing _ _ _ _ 17 than than ADP IN _ _ _ _ _ 18 cytosolic cytosolic NOUN NN Number=Sing _ _ _ _ 19 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 kappa kappa NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 29 partially partially ADV RB _ _ _ _ _ 30 independent independent ADJ JJ Degree=Pos _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 resynthesis resynthesis NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 10704 # text = Unexpectedly, the presence of nuclear 1 Unexpectedly unexpectedly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 presence presence NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ # sent_id = 10705 # text = I(kappa)B(alpha) did not inhibit NF-kappaB binding to DNA and this phenomenon was not due to the presence of IkappaBbeta at the nuclear level. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 kappa kappa X FW Foreign=Yes _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 5 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 alpha alpha X FW Foreign=Yes _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 15 binding bind VERB VBG VerbForm=Ger _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 DNA Dna NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 20 phenomenon phenomenon NOUN NN Number=Sing _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 due due ADP IN _ _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 presence presence NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 IkappaBbeta IkappaBbeta PROPN NNP Number=Sing _ _ _ _ 29 at at ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 32 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 10706 # text = Immunoprecipitation experiments failed to demonstrate an association between nuclear 1 Immunoprecipitation Immunoprecipitation NOUN NN Number=Sing _ _ _ _ 2 experiments experiment NOUN NNS Number=Plur _ _ _ _ 3 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 demonstrate demonstrate VERB VB VerbForm=Inf _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 association association NOUN NN Number=Sing _ _ _ _ 8 between between ADP IN _ _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ # sent_id = 10707 # text = I(kappa)B(alpha) and NF-kappaB proteins. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 kappa kappa X FW Foreign=Yes _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 5 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 10708 # text = Our results demonstrate that in resting and PMA-activated human PBL, I(kappa)B(alpha) is present in the nucleus in an apparently inactive form unable to disrupt NF-kappaB binding from DNA. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 in in ADV RB _ _ _ _ _ 6 resting rest VERB VBG VerbForm=Ger _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 PBL pBl NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 present present ADJ JJ Degree=Pos _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 apparently apparently ADV RB _ _ _ _ _ 30 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 31 form form NOUN NN Number=Sing _ _ _ _ 32 unable unable ADJ JJ Degree=Pos _ _ _ _ 33 to to PART TO _ _ _ _ _ 34 disrupt disrupt VERB VB VerbForm=Inf _ _ _ _ 35 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 38 binding bind VERB VBG VerbForm=Ger _ _ _ _ 39 from from ADP IN _ _ _ _ _ 40 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10709 # text = Document 0030012290 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012290 0030012290 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10710 # text = Tolerance to lipopolysaccharide involves mobilization of nuclear factor kappa B with predominance of p50 homodimers. 1 Tolerance Tolerance NOUN NN Number=Sing _ _ _ _ 2 to to PART TO _ _ _ _ _ 3 lipopolysaccharide lipopolysaccharide VERB VB VerbForm=Inf _ _ _ _ 4 involves involves NOUN NNS Number=Plur _ _ _ _ 5 mobilization mobilization NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 predominance predominance NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 p50 p50 NUM CD NumType=Card _ _ _ _ 15 homodimers homodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10711 # text = Stimulation of the human monocytic cell line Mono Mac 6 with lipopolysaccharide (LPS) leads to rapid and transient expression of cytokines like tumor necrosis factor (TNF). 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 line line NOUN NN Number=Sing _ _ _ _ 8 Mono Mono PROPN NNP Number=Sing _ _ _ _ 9 Mac Mac PROPN NNP Number=Sing _ _ _ _ 10 6 6 NUM CD NumType=Card _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 transient transient ADJ JJ Degree=Pos _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 24 like like ADP IN _ _ _ _ _ 25 tumor tumor NOUN NN Number=Sing _ _ _ _ 26 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 10712 # text = When such cells are precultured for 2 days with a low dose of LPS (20 ng/ml) followed by stimulation with a high dose of LPS (1 microgram/ml), expression of the TNF gene is minimal, i.e. the cells are tolerant. 1 When when ADV WRB PronType=Int _ _ _ _ 2 such such ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 precultured preculture VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 2 2 NUM CD NumType=Card _ _ _ _ 8 days day NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 low low ADJ JJ Degree=Pos _ _ _ _ 12 dose dose NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 LPS LPS PROPN NNP Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 20 20 NUM CD NumType=Card _ _ _ _ 17 ng ng NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 / / PUNCT , _ _ _ _ SpaceAfter=No 19 ml ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 high high ADJ JJ Degree=Pos _ _ _ _ 27 dose dose NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 LPS LPS NOUN NNS Number=Plur _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 microgram microgram NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 / / PUNCT , _ _ _ _ SpaceAfter=No 34 ml ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 expression expression NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 TNF TNF PROPN NNP Number=Sing _ _ _ _ 41 gene gene NOUN NN Number=Sing _ _ _ _ 42 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 43 minimal minimal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 i.e. i.e. X FW _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 cells cell NOUN NNS Number=Plur _ _ _ _ 48 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 49 tolerant tolerant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 10713 # text = In nuclear run-on analysis, such tolerant cells show only a low degree of transcription, indicating that tolerance operates at or upstream of the transcription level. 1 In in ADP IN _ _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 run run NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 on on ADP IN _ _ _ _ _ 6 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 such such ADJ JJ Degree=Pos _ _ _ _ 9 tolerant tolerant ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 only only ADV RB _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 low low ADJ JJ Degree=Pos _ _ _ _ 15 degree degree NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 tolerance tolerance NOUN NN Number=Sing _ _ _ _ 22 operates operate NOUN NNS Number=Plur _ _ _ _ 23 at at ADP IN _ _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 upstream upstream NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 10714 # text = The CD14 LPS receptor is, however, up-regulated (not down-regulated) in tolerant cells, and LPS can, in fact, still lead to activation of tolerant cells as evidenced by mobilization of the transcription factor nuclear factor kappa B (NF-kappa B). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 14 14 NUM CD NumType=Card _ _ _ _ 4 LPS Lps NOUN NN Number=Sing _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 however however ADV RB _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 up up ADV RB _ _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 regulated regulated VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 not not PART RB _ _ _ _ _ 15 down down ADV RB _ _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 tolerant tolerant ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 LPS Lp PROPN NNP Number=Sing _ _ _ _ 25 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 fact fact NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 still still ADV RB _ _ _ _ _ 31 lead lead VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 activation activation NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 tolerant tolerant ADJ JJ Degree=Pos _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ _ 37 as as SCONJ IN _ _ _ _ _ 38 evidenced evidence VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 by by ADP IN _ _ _ _ _ 40 mobilization mobilization NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 transcription transcription NOUN NN Number=Sing _ _ _ _ 44 factor factor NOUN NN Number=Sing _ _ _ _ 45 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 46 factor factor NOUN NN Number=Sing _ _ _ _ 47 kappa kappa NOUN NN Number=Sing _ _ _ _ 48 B b NOUN NN Number=Sing _ _ _ _ 49 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 50 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 kappa kappa NOUN NN Number=Sing _ _ _ _ 53 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 10715 # text = Resolution of the NF-kappa B complex in gel shift analysis shows that the binding protein, mobilized in naive Mono Mac 6 cells, consists mainly of p50-p65 heterodimers, while in tolerant cells, the p50 homodimer is predominant. 1 Resolution resolution NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 complex complex NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 gel gel NOUN NN Number=Sing _ _ _ _ 11 shift shift NOUN NN Number=Sing _ _ _ _ 12 analysis analysis NOUN NN Number=Sing _ _ _ _ 13 shows show VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 mobilized mobilize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 naive naive ADJ JJ Degree=Pos _ _ _ _ 22 Mono Mono PROPN NNP Number=Sing _ _ _ _ 23 Mac Mac PROPN NNP Number=Sing _ _ _ _ 24 6 6 NUM CD NumType=Card _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 consists consist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 mainly mainly ADV RB _ _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - SYM SYM _ _ _ _ SpaceAfter=No 32 p65 p65 NUM CD NumType=Card _ _ _ _ 33 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 while while SCONJ IN _ _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 tolerant tolerant ADJ JJ Degree=Pos _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 p50 p50 NOUN NN Number=Sing _ _ _ _ 42 homodimer homodimer NOUN NN Number=Sing _ _ _ _ 43 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 44 predominant predominant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 10716 # text = This increase in p50 homodimers coincides with an increase in p105 mRNA, suggestive of a transcriptional up-regulation of p50. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 increase increase NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 p50 p50 NUM CD NumType=Card _ _ _ _ 5 homodimers homodimer NOUN NNS Number=Plur _ _ _ _ 6 coincides coincide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 increase increase NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 p105 p105 NUM CD NumType=Card _ _ _ _ 12 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 suggestive suggestive NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 regulation regulation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 10717 # text = Reporter gene analysis reveals that the NF-kappa B complex mobilized in tolerant cells is functionally inactive in that NF-kappa B-dependent luciferase constructs containing the human immunodeficiency virus long terminal repeat or the TNF 5'-region show only minimal transactivation after LPS stimulation. 1 Reporter reporter NOUN NN Number=Sing _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 reveals reveal NOUN NNS Number=Plur _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 complex complex NOUN NN Number=Sing _ _ _ _ 12 mobilized mobilize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 tolerant tolerant ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 functionally functionally ADV RB _ _ _ _ _ 18 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa PROPN NNP Number=Sing _ _ _ _ 24 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 27 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 28 constructs construct NOUN NNS Number=Plur _ _ _ _ 29 containing contain VERB VBG VerbForm=Ger _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 human human ADJ JJ Degree=Pos _ _ _ _ 32 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 33 virus virus NOUN NN Number=Sing _ _ _ _ 34 long long ADV RB Degree=Pos _ _ _ _ 35 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 36 repeat repeat NOUN NN Number=Sing _ _ _ _ 37 or or CCONJ CC _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 TNF Tnf PROPN NNP Number=Sing _ _ _ _ 40 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 region region NOUN NN Number=Sing _ _ _ _ 44 show show NOUN NN Number=Sing _ _ _ _ 45 only only ADV RB _ _ _ _ _ 46 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 47 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 48 after after ADP IN _ _ _ _ _ 49 LPS LPS ADJ JJ Degree=Pos _ _ _ _ 50 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 10718 # text = Similar to Mono Mac 6 cells, primary blood monocytes, when precultured with a low dose of LPS, also become tolerant and produce little TNF after LPS stimulation. 1 Similar similar ADJ JJ Degree=Pos _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 Mono Mono PROPN NNP Number=Sing _ _ _ _ 4 Mac Mac PROPN NNP Number=Sing _ _ _ _ 5 6 6 NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 primary primary ADJ JJ Degree=Pos _ _ _ _ 9 blood blood NOUN NN Number=Sing _ _ _ _ 10 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 when when ADV WRB PronType=Int _ _ _ _ 13 precultured preculture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 low low ADJ JJ Degree=Pos _ _ _ _ 17 dose dose NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 also also ADV RB _ _ _ _ _ 22 become become VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 tolerant tolerant NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 produce produce VERB VB VerbForm=Inf _ _ _ _ 26 little little ADJ JJ Degree=Pos _ _ _ _ 27 TNF TNF PROPN NNP Number=Sing _ _ _ _ 28 after after ADP IN _ _ _ _ _ 29 LPS LPS PROPN NNP Number=Sing _ _ _ _ 30 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 10719 # text = The tolerant blood monocytes also up-regulate CD14, and they mobilize NF-kappa B with a predominance of p50 homodimers. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 tolerant tolerant ADJ JJ Degree=Pos _ _ _ _ 3 blood blood NOUN NN Number=Sing _ _ _ _ 4 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 up up ADV RB _ _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 9 CD14 CD14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 13 mobilize mobilize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 predominance predominance NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 p50 p50 NUM CD NumType=Card _ _ _ _ 23 homodimers homodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 10720 # text = Taken together, these results demonstrate that tolerance to LPS is determined by post-receptor mechanisms that involve an altered composition of the NF-kappa B complex. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 tolerance tolerance NOUN NN Number=Sing _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 LPS LPS PROPN NNP Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 post post X AFX _ _ _ _ SpaceAfter=No 15 -receptor -receptor ADJ JJ Degree=Pos _ _ _ _ 16 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 involve involve VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 altered alter VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 composition composition NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa NOUN NN Number=Sing _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ _ 28 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10721 # text = Document 0030012299 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012299 0030012299 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10722 # text = Evidence for suppressed activity of the transcription factor NFAT1 at its proximal binding element P0 in the IL-4 promoter associated with enhanced IL-4 gene transcription in T cells of atopic patients. 1 Evidence evidence NOUN NN Number=Sing _ _ _ _ 2 for for ADP IN _ _ _ _ _ 3 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 activity activity NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 NFAT1 nfat1 NOUN NN Number=Sing _ _ _ _ 10 at at ADP IN _ _ _ _ _ 11 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 12 proximal proximal NOUN NN Number=Sing _ _ _ _ 13 binding binding VERB VBG VerbForm=Ger _ _ _ _ 14 element element NOUN NN Number=Sing _ _ _ _ 15 P0 P0 NUM CD NumType=Card _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 4 4 NUM CD NumType=Card _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 4 4 NUM CD NumType=Card _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 atopic atopic ADJ JJ Degree=Pos _ _ _ _ 35 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10723 # text = Allergen-specific T cells in atopic patients are polarized IL-4-producing Th2 cells, promoting IgE synthesis by B cells. 1 Allergen Allergen PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 specific specific ADJ JJ Degree=Pos _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 atopic atopic ADJ JJ Degree=Pos _ _ _ _ 8 patients patient NOUN NNS Number=Plur _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 polarized polarize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 producing produce VERB VBG VerbForm=Ger _ _ _ _ 16 Th2 Th2 NUM CD NumType=Card _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 promoting promote VERB VBG VerbForm=Ger _ _ _ _ 20 IgE Ige ADJ JJ Degree=Pos _ _ _ _ 21 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 B b ADJ JJ Degree=Pos _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 10724 # text = The molecular basis for increased IL-4 gene expression in atopy is not fully understood. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 3 basis basis NOUN NN Number=Sing _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 4 4 NUM CD NumType=Card _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 atopy atopy NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 fully fully ADV RB _ _ _ _ _ 16 understood understand VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 10725 # text = IL-4 gene regulation in general involves the nuclear factor of activated T cells (NFAT) family of transcription factors, of which NFAT1 and NFAT2 are most prominent in peripheral T cells. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 regulation regulation NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 general general ADJ JJ Degree=Pos _ _ _ _ 8 involves involf NOUN NNS Number=Plur _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 T T PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 family family NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 which which PRON WDT PronType=Rel _ _ _ _ 26 NFAT1 nfat1 PROPN NNP Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 NFAT2 Nfat2 NUM CD NumType=Card _ _ _ _ 29 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 most most ADV RBS _ _ _ _ _ 31 prominent prominent ADJ JJ Degree=Pos _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 34 T t PROPN NNP Number=Sing _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 10726 # text = Recently, a unique inhibitory role of NFAT1 in IL-4 gene control was shown in the mouse. 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 unique unique ADJ JJ Degree=Pos _ _ _ _ 5 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NFAT1 NFAT1 PROPN NNP Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 4 4 NUM CD NumType=Card _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 control control NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 mouse mouse NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 10727 # text = In a series of electrophoretic mobility shift assays with protein extracts of highly polarized 1 In in ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 series series NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 6 mobility mobility NOUN NN Number=Sing _ _ _ _ 7 shift shift NOUN NN Number=Sing _ _ _ _ 8 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 extracts extract NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 highly highly ADV RB _ _ _ _ _ 14 polarized polarize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ # sent_id = 10728 # text = Th2 clones from atopics and Th1 clones from controls we compared DNA-binding activities at the two NFAT-binding elements P0 and P1 of the crucial proximal human IL-4 promoter. 1 Th2 Th2 NUM CD NumType=Card _ _ _ _ 2 clones clone NOUN NNS Number=Plur _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 atopics atopic NOUN NNS Number=Plur _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 Th1 Th1 NUM CD NumType=Card _ _ _ _ 7 clones clone NOUN NNS Number=Plur _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 controls controls NOUN NNS Number=Plur _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 binding binding VERB VBG VerbForm=Ger _ _ _ _ 15 activities activity NOUN NNS Number=Plur _ _ _ _ 16 at at ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 two two NUM CD NumType=Card _ _ _ _ 19 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 binding binding VERB VBG VerbForm=Ger _ _ _ _ 22 elements element NOUN NNS Number=Plur _ _ _ _ 23 P0 P0 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 P1 P1 NUM CD NumType=Card _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 29 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 4 4 NUM CD NumType=Card _ _ _ _ 34 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 10729 # text = At the most proximal P0 site, NFAT-containing complexes devoid of NFAT2 were readily inducible in the Th1 clones, but hardly or not in the Th2 clones. 1 At at ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 most most ADV RBS _ _ _ _ _ 4 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 5 P0 P0 NOUN NN Number=Sing _ _ _ _ 6 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 NFAT NFAT NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 containing contain VERB VBG VerbForm=Ger _ _ _ _ 11 complexes complex NOUN NNS Number=Plur _ _ _ _ 12 devoid devoid NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NFAT2 NFAT2 NUM CD NumType=Card _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 readily readily ADV RB _ _ _ _ _ 17 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 Th1 th1 NOUN NN Number=Sing _ _ _ _ 21 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 but but CCONJ CC _ _ _ _ _ 24 hardly hardly ADV RB _ _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 not not PART RB _ _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 Th2 Th2 NOUN NN Number=Sing _ _ _ _ 30 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 10730 # text = In contrast, both in Th1 and Th2 clones NFAT-containing complexes were strongly inducible at the P1 site, consisting of NFAT2 and a P0-compatible NFAT activity, without apparent differences between Th1 and Th2 clones. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 both both CCONJ CC _ _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 Th1 Th1 NUM CD NumType=Card _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 Th2 Th2 NUM CD NumType=Card _ _ _ _ 9 clones clone NOUN NNS Number=Plur _ _ _ _ 10 NFAT Nfat ADV RB _ _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 containing containing VERB VBG VerbForm=Ger _ _ _ _ 13 complexes complex NOUN NNS Number=Plur _ _ _ _ 14 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 strongly strongly ADV RB _ _ _ _ _ 16 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 17 at at ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 P1 P1 PROPN NNP Number=Sing _ _ _ _ 20 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 consisting consisting VERB VBG VerbForm=Ger _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 NFAT2 NFAT2 NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 P0- p0- NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 compatible compatible ADJ JJ Degree=Pos _ _ _ _ 29 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 30 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 without without ADP IN _ _ _ _ _ 33 apparent apparent ADJ JJ Degree=Pos _ _ _ _ 34 differences difference NOUN NNS Number=Plur _ _ _ _ 35 between between ADP IN _ _ _ _ _ 36 Th1 Th1 NUM CD NumType=Card _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 Th2 Th2 NUM CD NumType=Card _ _ _ _ 39 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 10731 # text = Like in Th2 clones, suppressed NFAT-P0 complex formation was observed also at the polyclonal level in peripheral blood mononuclear cells (PBMC) of three of five severe atopic dermatitis patients with strongly elevated serum IgE levels, but not in control PBMC. 1 Like like ADP IN _ _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 Th2 Th2 NUM CD NumType=Card _ _ _ _ 4 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 P0 P0 PROPN NNP Number=Sing _ _ _ _ 10 complex complex ADJ JJ Degree=Pos _ _ _ _ 11 formation formation NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 at at ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 polyclonal polyclonal ADJ JJ Degree=Pos _ _ _ _ 18 level level NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 21 blood blood NOUN NN Number=Sing _ _ _ _ 22 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 PBMC PBMC X LS _ _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 three three NUM CD NumType=Card _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 five five NUM CD NumType=Card _ _ _ _ 31 severe severe ADJ JJ Degree=Pos _ _ _ _ 32 atopic atopic ADJ JJ Degree=Pos _ _ _ _ 33 dermatitis dermatitis NOUN NN Number=Sing _ _ _ _ 34 patients patient NOUN NN Number=Sing _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 strongly strongly ADV RB _ _ _ _ _ 37 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 serum serum NOUN NN Number=Sing _ _ _ _ 39 IgE Ige NOUN NN Number=Sing _ _ _ _ 40 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 but but CCONJ CC _ _ _ _ _ 43 not not ADV RB _ _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 control control NOUN NN Number=Sing _ _ _ _ 46 PBMC PBMC NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 10732 # text = These findings suggest that high-level IL-4 production in atopic 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 level level NOUN NN Number=Sing _ _ _ _ 8 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 4 4 NUM CD NumType=Card _ _ _ _ 11 production production NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 atopic atopic NOUN NN Number=Sing _ _ _ _ # sent_id = 10733 # text = Th2 cells is associated with selective reduction of suppressive NFAT1 activity at the IL-4 P0 element and that some patients with this multifactorial disease may have a putative systemic disorder at this level. 1 Th2 Th2 NUM CD NumType=Card _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 selective selective ADJ JJ Degree=Pos _ _ _ _ 7 reduction reduction NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 suppressive suppressive ADJ JJ Degree=Pos _ _ _ _ 10 NFAT1 NFAT1 NUM CD NumType=Card _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 at at ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 4 4 NUM CD NumType=Card _ _ _ _ 17 P0 P0 NUM CD NumType=Card _ _ _ _ 18 element element NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 some some DET DT _ _ _ _ _ 22 patients patient NOUN NN Number=Sing _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 25 multifactorial multifactorial ADJ JJ Degree=Pos _ _ _ _ 26 disease disease NOUN NN Number=Sing _ _ _ _ 27 may may AUX MD VerbForm=Fin _ _ _ _ 28 have have VERB VB VerbForm=Inf _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 putative putative ADJ JJ Degree=Pos _ _ _ _ 31 systemic systemic ADJ JJ Degree=Pos _ _ _ _ 32 disorder disorder NOUN NN Number=Sing _ _ _ _ 33 at at ADP IN _ _ _ _ _ 34 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 35 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10734 # text = Document 0030012307 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012307 0030012307 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10735 # text = Platelet-activating factor induces phospholipid turnover, calcium flux, arachidonic acid liberation, eicosanoid generation, and oncogene expression in a human B cell line. 1 Platelet Platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 activating activate VERB VBG VerbForm=Ger _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 induces induces NOUN NNS Number=Plur _ _ _ _ 6 phospholipid phospholipid ADJ JJ Degree=Pos _ _ _ _ 7 turnover turnover NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 calcium calcium NOUN NN Number=Sing _ _ _ _ 10 flux flux NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 arachidonic arachidonic ADJ JJ Degree=Pos _ _ _ _ 13 acid acid ADJ JJ Degree=Pos _ _ _ _ 14 liberation liberation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 eicosanoid eicosanoid ADJ JJ Degree=Pos _ _ _ _ 17 generation generation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 oncogene oncogene ADJ JJ Degree=Pos _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10736 # text = Platelet-activating factor is a potent mediator of the inflammatory response. 1 Platelet Platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 activating activating NOUN NN Number=Sing _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 potent potent NOUN NN Number=Sing _ _ _ _ 8 mediator mediator NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 12 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 10737 # text = Studies of the actions of platelet-activating factor have centered mainly around neutrophils, monocytes, and platelets. 1 Studies study NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 actions action NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 activating activating NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 centered center VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 mainly mainly ADV RB _ _ _ _ _ 13 around around ADP IN _ _ _ _ _ 14 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 platelets platelet NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 10738 # text = In this report we begin to uncover the influence of platelet-activating factor on B lymphocytes. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 begin begin VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 uncover uncover VERB VB VerbForm=Inf _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 influence influence NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 activating activate VERB VBG VerbForm=Ger _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 B b ADJ JJ Degree=Pos _ _ _ _ 17 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 10739 # text = Employing the EBV-transformed human B cell line SKW6.4, we demonstrate that platelet-activating factor significantly alters membrane phospholipid metabolism indicated by the incorporation of 32P into phosphatidylcholine, phosphatidylinositol, and phosphatidic acid but not significantly into phosphatidylethanolamine at concentrations ranging from 10(-9) to 10(-6) M. 1 Employing Employ VERB VBG VerbForm=Ger _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 line line NOUN NN Number=Sing _ _ _ _ 10 SKW6.4 Skw6.4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 13 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 15 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 activating activating VERB VBG VerbForm=Ger _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 significantly significantly ADV RB _ _ _ _ _ 20 alters alter VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 membrane membrane PRON NN Number=Sing _ _ _ _ 22 phospholipid phospholipid ADJ JJ Degree=Pos _ _ _ _ 23 metabolism metabolism NOUN NN Number=Sing _ _ _ _ 24 indicated indicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 incorporation incorporation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 32P 32p NOUN NN Number=Sing _ _ _ _ 30 into into ADP IN _ _ _ _ _ 31 phosphatidylcholine phosphatidylcholine NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 phosphatidylinositol phosphatidylinositol NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 phosphatidic phosphatidic ADJ JJ Degree=Pos _ _ _ _ 37 acid acid NOUN NN Number=Sing _ _ _ _ 38 but but CCONJ CC _ _ _ _ _ 39 not not ADV RB _ _ _ _ _ 40 significantly significantly ADV RB _ _ _ _ _ 41 into into ADP IN _ _ _ _ _ 42 phosphatidylethanolamine phosphatidylethanolamine NOUN NN Number=Sing _ _ _ _ 43 at at ADP IN _ _ _ _ _ 44 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 45 ranging range VERB VBG VerbForm=Ger _ _ _ _ 46 from from ADP IN _ _ _ _ _ 47 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 (- (- PUNCT . _ _ _ _ SpaceAfter=No 49 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ _ 51 to to ADP IN _ _ _ _ _ 52 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 53 (-6 (-6 NUM CD NumType=Card _ _ _ SpaceAfter=No 54 ) ) PUNCT -RRB- _ _ _ _ _ 55 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 10740 # text = The inactive precursor, lyso-platelet-activating factor, at a concentration as high as 10(-7) M had no effect on any of the membrane phospholipids. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 3 precursor precursor NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 lyso lyso NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 activating activating VERB VBG VerbForm=Ger _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 at at ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 concentration concentration NOUN NN Number=Sing _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 high high ADJ JJ Degree=Pos _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 (- (- PUNCT . _ _ _ _ SpaceAfter=No 20 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 M m NOUN NN Number=Sing _ _ _ _ 23 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 no no DET DT _ _ _ _ _ 25 effect effect NOUN NN Number=Sing _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 any any DET DT _ _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 membrane membrane NOUN NN Number=Sing _ _ _ _ 31 phospholipids phospholipid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 10741 # text = We also show that platelet-activating factor from 10(-12) to 10(-6) M induced rapid and significant elevation in intracellular calcium levels, whereas lyso-platelet-activating factor was again ineffective. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 activating activat VERB VBG VerbForm=Ger _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 (-12 (-12 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 (-6 (-6 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 M be NOUN NN Number=Sing _ _ _ _ 18 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 significant significant ADJ JJ Degree=Pos _ _ _ _ 22 elevation elevation NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 25 calcium calcium NOUN NN Number=Sing _ _ _ _ 26 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 whereas whereas SCONJ IN _ _ _ _ _ 29 lyso lyso NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 -platelet -platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 activating activating VERB VBG VerbForm=Ger _ _ _ _ 33 factor factor NOUN NN Number=Sing _ _ _ _ 34 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 35 again again ADV RB _ _ _ _ _ 36 ineffective ineffective ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 10742 # text = We further demonstrate the impact of platelet-activating factor binding to B cells by measuring platelet-activating factor induced arachidonic acid release and 5-hydroxyeicosatetraenoic acid production. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 impact impact NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 activating activat VERB VBG VerbForm=Ger _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 B b ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 by by SCONJ IN _ _ _ _ _ 16 measuring measure VERB VBG VerbForm=Ger _ _ _ _ 17 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 activating activate VERB VBG VerbForm=Ger _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 arachidonic arachidonic ADJ JJ Degree=Pos _ _ _ _ 23 acid acid NOUN NN Number=Sing _ _ _ _ 24 release release NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 hydroxyeicosatetraenoic hydroxyeicosatetraenoic ADJ JJ Degree=Pos _ _ _ _ 29 acid acid ADJ JJ Degree=Pos _ _ _ _ 30 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 10743 # text = Moreover, platelet-activating factor was capable of inducing transcription of the nuclear proto-oncogenes c-fos and c-jun. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 activating activating VERB VBG VerbForm=Ger _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 capable capable ADJ JJ Degree=Pos _ _ _ _ 9 of of SCONJ IN _ _ _ _ _ 10 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 -oncogenes -oncogene NOUN NNS Number=Plur _ _ _ _ 17 c- c- PUNCT : _ _ _ _ SpaceAfter=No 18 fos fo NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 c- c- SYM NFP _ _ _ _ SpaceAfter=No 21 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10744 # text = Finally we explored the possible role of 5-hydroxyeicosatetraenoic acid as a regulator of arachidonic acid liberation demonstrating that endogenous 5-lipoxygenase activity modulates platelet-activating factor induced arachidonic acid release perhaps acting at the level of phospholipase A2. 1 Finally finally ADV RB _ _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 explored explore VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 possible possible ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 hydroxyeicosatetraenoic hydroxyeicosatetraenoic NOUN NN Number=Sing _ _ _ _ 11 acid acid NOUN NN Number=Sing _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 regulator regulator NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 arachidonic arachidonic ADJ JJ Degree=Pos _ _ _ _ 17 acid acid NOUN NN Number=Sing _ _ _ _ 18 liberation liberation NOUN NN Number=Sing _ _ _ _ 19 demonstrating demonstrating VERB VBG VerbForm=Ger _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 22 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 lipoxygenase lipoxygenase NOUN NN Number=Sing _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ _ 26 modulates modulate NOUN NNS Number=Plur _ _ _ _ 27 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 activating activate VERB VBG VerbForm=Ger _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ _ 31 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 arachidonic arachidonic ADJ JJ Degree=Pos _ _ _ _ 33 acid acid NOUN NN Number=Sing _ _ _ _ 34 release release NOUN NN Number=Sing _ _ _ _ 35 perhaps perhaps ADV RB _ _ _ _ _ 36 acting act VERB VBG VerbForm=Ger _ _ _ _ 37 at at ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 level level NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 phospholipase phospholipase NOUN NN Number=Sing _ _ _ _ 42 A2 a2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 10745 # text = In summary, platelet-activating factor is shown here to have a direct and profound effect on a pure B cell line. 1 In in ADP IN _ _ _ _ _ 2 summary summary NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 activating activating NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 here here ADV RB PronType=Dem _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 have have VERB VB VerbForm=Inf _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 direct direct ADJ JJ Degree=Pos _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 profound profound ADJ JJ Degree=Pos _ _ _ _ 17 effect effect NOUN NN Number=Sing _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 pure pure ADJ JJ Degree=Pos _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10746 # text = Document 0030012308 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012308 0030012308 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10747 # text = Molecular mechanisms of neutrophil-endothelial cell adhesion induced by redox imbalance. 1 Molecular Molecular ADJ JJ Degree=Pos _ _ _ _ 2 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 neutrophil neutrophil NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 redox redox NOUN NN Number=Sing _ _ _ _ 12 imbalance imbalance NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10748 # text = Previous studies have implicated a role for intracellular thiols in the activation of nuclear factor-kappaB and transcriptional regulation of endothelial cell adhesion molecules. 1 Previous previous ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 implicated implicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 9 thiols thiol NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappab NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 20 regulation regulation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 25 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 10749 # text = This study was designed to determine whether changes in endothelial cell glutathione (GSH) or oxidized glutathione (GSSG) can alter neutrophil adhesivity and to define the molecular mechanism that underlies this GSSG/GSH-induced adhesion response. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 designed design VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 determine determine VERB VB VerbForm=Inf _ _ _ _ 7 whether whether SCONJ IN _ _ _ _ _ 8 changes change NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 glutathione glutathione NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 GSH GSH NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 oxidized oxidize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 glutathione glutathione NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 GSSG GSSG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 can can AUX MD VerbForm=Fin _ _ _ _ 23 alter alter VERB VB VerbForm=Inf _ _ _ _ 24 neutrophil neutrophil ADP IN _ _ _ _ _ 25 adhesivity adhesivity NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 define define VERB VB VerbForm=Inf _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 31 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 32 that that PRON WDT PronType=Rel _ _ _ _ 33 underlies underly VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 35 GSSG/GSH GSSG/GSh NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 39 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 10750 # text = Treatment of human umbilical vein endothelial cell (HUVEC) monolayers for 6 hours with 0.2 mmol/L diamide and 1 mmol/L buthionine sulfoximine (BSO) decreased GSH levels and increased the ratio of GSSG to GSH without cell toxicity. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 5 vein vein NOUN NN Number=Sing _ _ _ _ 6 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 HUVEC HUVEC NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 monolayers monolayer NOUN NNS Number=Plur _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 6 6 NUM CD NumType=Card _ _ _ _ 14 hours hour NOUN NNS Number=Plur _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 0.2 0.2 NUM CD NumType=Card _ _ _ _ 17 mmol/L mmol/l NOUN NN Number=Sing _ _ _ _ 18 diamide diamide NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 1 1 NUM CD NumType=Card _ _ _ _ 21 mmol/L mmol/l NOUN NN Number=Sing _ _ _ _ 22 buthionine buthionine NUM CD NumType=Card _ _ _ _ 23 sulfoximine sulfoximine NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 BSO BSO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 decreased decrease VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 GSH Gsh ADJ JJ Degree=Pos _ _ _ _ 29 levels level NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 ratio ratio NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 GSSG GSSG PROPN NNP Number=Sing _ _ _ _ 36 to to PART TO _ _ _ _ _ 37 GSH Gsh VERB VB VerbForm=Inf _ _ _ _ 38 without without ADP IN _ _ _ _ _ 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 toxicity toxicity NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 10751 # text = These redox changes are similar to those observed with anoxia/reoxygenation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 redox redox NOUN NN Number=Sing _ _ _ _ 3 changes change NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 similar similar ADJ JJ Degree=Pos _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 8 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 anoxia anoxia NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 reoxygenation reoxygenation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 10752 # text = Diamide plus BSO-induced thiol/disulfide imbalance was associated with a biphasic increase in neutrophil adhesion to HUVECs with peak responses observed at 15 minutes (phase 1) and 240 minutes (phase 2). 1 Diamide Diamide PROPN NNP Number=Sing _ _ _ _ 2 plus plus CCONJ CC _ _ _ _ _ 3 BSO Bso PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 induced induced VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 thiol thiol NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 disulfide disulfide NOUN NN Number=Sing _ _ _ _ 9 imbalance imbalance NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 biphasic biphasic ADJ JJ Degree=Pos _ _ _ _ 15 increase increase NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 18 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 peak peak NOUN NN Number=Sing _ _ _ _ 23 responses response NOUN NNS Number=Plur _ _ _ _ 24 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 at at ADP IN _ _ _ _ _ 26 15 15 NUM CD NumType=Card _ _ _ _ 27 minutes minute NOUN NNS Number=Plur _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 phase phase NOUN NN Number=Sing _ _ _ _ 30 1 1 X LS _ _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 240 240 NUM CD NumType=Card _ _ _ _ 34 minutes minute NOUN NNS Number=Plur _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 phase phase NOUN NN Number=Sing _ _ _ _ 37 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 10753 # text = N-Acetylcysteine treatment attenuated neutrophil adhesion in both phases, which indicated a role for GSH in the adhesion responses. 1 N not CCONJ CC Abbr=Yes _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 Acetylcysteine Acetylcysteine ADJ JJ Degree=Pos _ _ _ _ 4 treatment treatment NOUN NN Number=Sing _ _ _ _ 5 attenuated attenuate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 neutrophil neutrophil ADP IN _ _ _ _ _ 7 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 both both DET DT _ _ _ _ _ 10 phases phase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 role role NOUN NN Number=Sing _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 GSH GSH PROPN NNP Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 21 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10754 # text = Interestingly, phase 1 adhesion was inversely correlated with GSH levels but not with the GSSG/GSH ratio, whereas phase 2 neutrophil adhesion was positively correlated with GSSG/GSH ratio but not with GSH levels. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 phase phase NOUN NN Number=Sing _ _ _ _ 4 1 1 NUM CD NumType=Card _ _ _ _ 5 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 inversely inversely ADV RB _ _ _ _ _ 8 correlated correlate ADJ JJ Degree=Pos _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 GSH Gsh ADJ JJ Degree=Pos _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 GSSG Gssg PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 GSH Gsh PROPN NNP Number=Sing _ _ _ _ 19 ratio ratio NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 whereas whereas SCONJ IN _ _ _ _ _ 22 phase phase NOUN NN Number=Sing _ _ _ _ 23 2 2 NUM CD NumType=Card _ _ _ _ 24 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 25 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 positively positively ADV RB _ _ _ _ _ 28 correlated correlate ADJ JJ Degree=Pos _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 GSSG GSSG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 / / PUNCT , _ _ _ _ SpaceAfter=No 32 GSH Gsh PROPN NNP Number=Sing _ _ _ _ 33 ratio ratio NOUN NN Number=Sing _ _ _ _ 34 but but CCONJ CC _ _ _ _ _ 35 not not PART RB _ _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 GSH Gsh DET DT _ _ _ _ _ 38 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 10755 # text = Intercellular adhesion molecule-1 and P-selectin-specific monoclonal antibodies attenuated the increased neutrophil adhesion during both phases, whereas an anti-E-selectin monoclonal antibody also attenuated the phase 2 response. 1 Intercellular Intercelular ADJ JJ Degree=Pos _ _ _ _ 2 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 3 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 P-selectin-specific P-selectin-specific ADJ JJ Degree=Pos _ _ _ _ 8 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 9 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 10 attenuated attenuate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 14 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 15 during during ADP IN _ _ _ _ _ 16 both both DET DT _ _ _ _ _ 17 phases phase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 whereas whereas SCONJ IN _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 anti-E- anti-E- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 selectin selectin VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 24 antibody antibody NOUN NN Number=Sing _ _ _ _ 25 also also ADV RB _ _ _ _ _ 26 attenuated attenuate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 phase phase NOUN NN Number=Sing _ _ _ _ 29 2 2 NUM CD NumType=Card _ _ _ _ 30 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 10756 # text = Pretreatment with actinomycin D and cycloheximide or with competing ds-oligonucleotides that contained nuclear factor-kappaB or activator protein-1 cognate DNA sequences significantly attenuated the phase 2 response, which implicated a role for de novo protein synthesis. 1 Pretreatment Pretreatment NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 actinomycin actinomycin NOUN NN Number=Sing _ _ _ _ 4 D d NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 with with SCONJ IN _ _ _ _ _ 9 competing compete VERB VBG VerbForm=Ger _ _ _ _ 10 ds d NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 contained contain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappab NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 activator activator NOUN NN Number=Sing _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 cognate cognate NOUN NN Number=Sing _ _ _ _ 25 DNA dna NOUN NN Number=Sing _ _ _ _ 26 sequences sequence NOUN NNS Number=Plur _ _ _ _ 27 significantly significantly ADV RB _ _ _ _ _ 28 attenuated attenuate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 phase phase NOUN NN Number=Sing _ _ _ _ 31 2 2 NUM CD NumType=Card _ _ _ _ 32 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 which which PRON WDT PronType=Rel _ _ _ _ 35 implicated implicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 role role NOUN NN Number=Sing _ _ _ _ 38 for for ADP IN _ _ _ _ _ 39 de de PROPN NNP Number=Sing _ _ _ _ 40 novo novo PROPN NNP Number=Sing _ _ _ _ 41 protein protein NOUN NN Number=Sing _ _ _ _ 42 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 10757 # text = Surface expression of intercellular adhesion molecule-1, P-selectin, and E-selectin on HUVECs correlated with the phase 1 and 2 neutrophil adhesion responses. 1 Surface surface NOUN NN Number=Sing _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 intercellular intercellular ADJ JJ Degree=Pos _ _ _ _ 5 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 6 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 P-selectin P-selectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 E- E- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 selectin selectin NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ _ 17 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 phase phase NOUN NN Number=Sing _ _ _ _ 21 1 1 NUM CD NumType=Card _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 2 2 NUM CD NumType=Card _ _ _ _ 24 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 25 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 26 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 10758 # text = This study demonstrates that changes in endothelial cell GSSG/GSH cause transcription-independent and transcription-dependent surface expression of different endothelial cell adhesion molecules, which leads to a 2-phase neutrophil-endothelial adhesion response. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 changes change NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 GSSG GSSG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 GSH Gsh ADJ JJ Degree=Pos _ _ _ _ 12 cause cause NOUN NN Number=Sing _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 independent independent ADJ JJ Degree=Pos _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 20 surface surface NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 different different ADJ JJ Degree=Pos _ _ _ _ 24 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 27 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 which which PRON WDT PronType=Rel _ _ _ _ 30 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 phase phase NOUN NN Number=Sing _ _ _ _ 36 neutrophil neutrophil NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 39 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 40 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10759 # text = Document 0030012311 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012311 0030012311 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10760 # text = Alpha-tocopherol inhibits agonist-induced monocytic cell adhesion to cultured human endothelial cells. 1 Alpha Alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 tocopherol tocopherol NOUN NN Number=Sing _ _ _ _ 4 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 5 agonist agonist ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 cultured cultured ADJ JJ Degree=Pos _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10761 # text = Antioxidants have been proposed to be anti-atherosclerotic agents; however, the mechanisms underlying their beneficial effects are poorly understood. 1 Antioxidants Antioxidant NOUN NNS Number=Plur _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 4 proposed propose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 anti-atherosclerotic anti-atherosclerotic ADJ JJ Degree=Pos _ _ _ _ 8 agents agent NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 ; ; PUNCT , _ _ _ _ _ 10 however however ADV RB _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 14 underlying underly VERB VBG VerbForm=Ger _ _ _ _ 15 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 beneficial beneficial ADJ JJ Degree=Pos _ _ _ _ 17 effects effect NOUN NNS Number=Plur _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 poorly poorly ADV RB _ _ _ _ _ 20 understood understand VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 10762 # text = We have examined the effect of alpha-tocopherol (alpha-tcp) on one cellular event in atherosclerotic plaque development, monocyte adhesion to stimulated endothelial cells (ECs). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 tocopherol tocopherol NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 tcp tcp NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 one one NUM CD NumType=Card _ _ _ _ 17 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 18 event event NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 atherosclerotic atherosclerotic ADJ JJ Degree=Pos _ _ _ _ 21 plaque plaque NOUN NN Number=Sing _ _ _ _ 22 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 monocyte monocyte ADJ JJ Degree=Pos _ _ _ _ 25 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 stimulated stimulate VERB VB VerbForm=Inf _ _ _ _ 28 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 ECs EC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 10763 # text = Human umbilical vein ECs were pretreated with alpha-tcp before stimulation with known agonists of monocyte adhesion: IL-1 (10 ng/ml), LPS (10 ng/ml), thrombin (30 U/ml), or PMA (10 nM). 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 3 vein vein NOUN NN Number=Sing _ _ _ _ 4 ECs EC NOUN NNS Number=Plur _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 pretreated pretreate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 tcp tcp NOUN NN Number=Sing _ _ _ _ 11 before before ADP IN _ _ _ _ _ 12 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 agonists agonist NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 18 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 : : PUNCT : _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 10 10 NUM CD NumType=Card _ _ _ _ 25 ng/ ng/ PUNCT HYPH _ _ _ _ SpaceAfter=No 26 ml ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 LPS LPS PROPN NNP Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 10 10 NUM CD NumType=Card _ _ _ _ 32 ng/ ng/ PUNCT HYPH _ _ _ _ SpaceAfter=No 33 ml ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 thrombin thrombin PROPN NNP Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 30 30 NUM CD NumType=Card _ _ _ _ 39 U/ U/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 ml ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 or or CCONJ CC _ _ _ _ _ 44 PMA PMA PROPN NNP Number=Sing _ _ _ _ 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 10 10 NUM CD NumType=Card _ _ _ _ 47 nM nm NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 10764 # text = Agonist-induced monocytic cell adhesion, but not basal adhesion, was inhibited in a time- and concentration-dependent manner by alpha-tcp. 1 Agonist Agonist PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -induced -induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 but but CCONJ CC _ _ _ _ _ 8 not not ADV RB _ _ _ _ _ 9 basal basal ADJ JJ Degree=Pos _ _ _ _ 10 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 concentration concentration NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 22 manner manner NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 tcp tcp NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 10765 # text = The IC50 of alpha-tcp on an IL-1-induced response was 45 microM. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 IC50 IC50 NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 tcp tcp NOUN NN Number=Sing _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 response response NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 45 45 NUM CD NumType=Card _ _ _ _ 17 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 10766 # text = The inhibition correlated with a decrease in steady state levels of E-selectin mRNA and cell surface expression of E-selectin which is consistent with the ability of a monoclonal antibody to E-selectin to inhibit monocytic cell adhesion in this system. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 decrease decrease NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 steady steady ADJ JJ Degree=Pos _ _ _ _ 9 state state NOUN NN Number=Sing _ _ _ _ 10 levels level NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 selectin selectin NOUN NN Number=Sing _ _ _ _ 14 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 surface surface NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 selectin selectin NOUN NN Number=Sing _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 ability ability NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 31 antibody antibody NOUN NN Number=Sing _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 E- E- X GW _ _ _ _ SpaceAfter=No 34 selectin selectin NOUN NN Number=Sing _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 37 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 42 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 10767 # text = Probucol (50 microM) and N-acetylcysteine (20 mM) also inhibited agonist-induced monocytic cell adhesion; whereas, several other antioxidants had no significant effect. 1 Probucol Probucol PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 50 50 NUM CD NumType=Card _ _ _ _ 4 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 N- N- SYM NFP _ _ _ _ SpaceAfter=No 8 acetylcysteine acetylcysteine NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 20 20 NUM CD NumType=Card _ _ _ _ 11 mM mm NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 also also ADV RB _ _ _ _ _ 14 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 agonist agonist NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ; ; PUNCT , _ _ _ _ _ 22 whereas wherea NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 several several ADJ JJ Degree=Pos _ _ _ _ 25 other other ADJ JJ Degree=Pos _ _ _ _ 26 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ _ 27 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 no no DET DT _ _ _ _ _ 29 significant significant ADJ JJ Degree=Pos _ _ _ _ 30 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 10768 # text = Protein kinase C (PKC) does not appear to play a role in the alpha-tcp effect since no suppression of phosphorylation of PKC substrates was observed. 1 Protein protein NOUN NN Number=Sing _ _ _ _ 2 kinase kinase NOUN NN Number=Sing _ _ _ _ 3 C C PROPN NNP Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 appear appear VERB VB VerbForm=Inf _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 play play VERB VB VerbForm=Inf _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 role role NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 tcp tcp NOUN NN Number=Sing _ _ _ _ 19 effect effect NOUN NN Number=Sing _ _ _ _ 20 since since ADP IN _ _ _ _ _ 21 no no DET DT _ _ _ _ _ 22 suppression suppression NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 PKC Pkc NOUN NN Number=Sing _ _ _ _ 27 substrates substrate NOUN NNS Number=Plur _ _ _ _ 28 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 29 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 10769 # text = Activation of the transcription factor NF-kappa B is reported to be necessary but not sufficient for E-selectin expression in EC. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 not not ADV RB _ _ _ _ _ 17 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 E- E- SYM SYM _ _ _ _ SpaceAfter=No 20 selectin selectin ADJ JJ Degree=Pos _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 EC EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 10770 # text = Electrophoretic mobility shift assays failed to show an alpha-tcp-induced decrease in activation of this transcription factor after cytokine stimulation. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assays assays NOUN NNS Number=Plur _ _ _ _ 5 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 show show VERB VB VerbForm=Inf _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 alpha- alpha- SYM SYM _ _ _ _ SpaceAfter=No 10 tcp-induced tcp-induced VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 decrease decrease NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 after after ADP IN _ _ _ _ _ 19 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 20 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 10771 # text = It has been hypothesized that alpha-tcp acts as an anti-atherosclerotic molecule by inhibiting generation of oxidized LDL--a putative triggering molecule in the atherosclerotic process. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 4 hypothesized hypothesize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 tcp tcp NOUN NN Number=Sing _ _ _ _ 9 acts act NOUN NNS Number=Plur _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 anti-atherosclerotic anti-atherosclerotic ADJ JJ Degree=Pos _ _ _ _ 13 molecule molecule NOUN NN Number=Sing _ _ _ _ 14 by by SCONJ IN _ _ _ _ _ 15 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 16 generation generation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 oxidized oxidized ADJ JJ Degree=Pos _ _ _ _ 19 LDL LDL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 -- -- PUNCT , _ _ _ _ SpaceAfter=No 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 putative putative ADJ JJ Degree=Pos _ _ _ _ 23 triggering triggering NOUN NN Number=Sing _ _ _ _ 24 molecule molecule NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 atherosclerotic atherosclerotic ADJ JJ Degree=Pos _ _ _ _ 28 process process NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 10772 # text = Our results point to a novel alternative mechanism of action of alpha-tcp. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 point point VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 novel novel NOUN NN Number=Sing _ _ _ _ 7 alternative alternative NOUN NN Number=Sing _ _ _ _ 8 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 action action NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 tcp. tcp. NOUN NN Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10773 # text = Document 0030012317 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012317 0030012317 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10774 # text = CD14-mediated translocation of nuclear factor-kappa B induced by lipopolysaccharide does not require tyrosine kinase activity. 1 CD14 CD14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -mediated -mediated VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 translocation translocation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 13 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 require require VERB VB VerbForm=Inf _ _ _ _ 16 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 17 kinase kinase NOUN NN Number=Sing _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10775 # text = During the course of serious bacterial infections, lipopolysaccharide (LPS) is believed to interact with macrophage receptors, resulting in the generation of inflammatory mediators and systemic symptoms including hemodynamic instability and shock. 1 During during ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 course course NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 serious serious ADJ JJ Degree=Pos _ _ _ _ 6 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 7 infections infection NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 believed believe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 interact interact VERB VB VerbForm=Inf _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 19 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 resulting result VERB VBG VerbForm=Ger _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 generation generation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 27 mediators mediator NOUN NNS Number=Plur _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 systemic systemic ADJ JJ Degree=Pos _ _ _ _ 30 symptoms symptom NOUN NNS Number=Plur _ _ _ _ 31 including include VERB VBG VerbForm=Ger _ _ _ _ 32 hemodynamic hemodynamic ADJ JJ Degree=Pos _ _ _ _ 33 instability instability NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 shock shock NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 10776 # text = CD14, a glycosylphosphatidylinositol-linked antigen, functions as an LPS signaling receptor. 1 CD14 CD14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 glycosylphosphatidylinositol glycosylphosphatidylinositol NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 antigen antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 functions function NOUN NNS Number=Plur _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 LPS LPS PROPN NNP Number=Sing _ _ _ _ 13 signaling signaling NOUN NN Number=Sing _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 10777 # text = A critical issue concerns the mechanism by which CD14, which has no transmembrane domain, transduces its signal following LPS binding. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 critical critical ADJ JJ Degree=Pos _ _ _ _ 3 issue issue NOUN NN Number=Sing _ _ _ _ 4 concerns concern NOUN NNS Number=Plur _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 CD14 CD14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 no no DET DT _ _ _ _ _ 14 transmembrane transmembrane NOUN NN Number=Sing _ _ _ _ 15 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 transduces transduce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 signal signal NOUN NN Number=Sing _ _ _ _ 20 following follow VERB VBG VerbForm=Ger _ _ _ _ 21 LPS Lp NOUN NNS Number=Plur _ _ _ _ 22 binding bind VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 10778 # text = Recently, investigators have hypothesized that CD14-mediated signaling is effected through a receptor-associated tyrosine kinase (TK), suggesting a multicomponent receptor model of LPS signaling. 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 investigators investigator NOUN NNS Number=Plur _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 hypothesized hypothesize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 CD14 Cd14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 -mediated -mediated ADJ JJ Degree=Pos _ _ _ _ 9 signaling signaling NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 effected effect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 through through ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 18 kinase kinase NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 TK TK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 multicomponent multicomponent ADJ JJ Degree=Pos _ _ _ _ 26 receptor receptor NOUN NN Number=Sing _ _ _ _ 27 model model NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 LPS LPS ADJ JJ Degree=Pos _ _ _ _ 30 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 10779 # text = Wild-type Chinese hamster ovary (CHO)-K1 cells can be activated by endotoxin to release arachidonate following transfection with human CD14 (CHO/CD14). 1 Wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 type type NOUN NN Number=Sing _ _ _ _ 4 Chinese chinese ADJ JJ Degree=Pos _ _ _ _ 5 hamster hamster NOUN NN Number=Sing _ _ _ _ 6 ovary ovary NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 CHO Cho PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 - - SYM SYM _ _ _ _ SpaceAfter=No 11 K1 K1 NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 can can AUX MD VerbForm=Fin _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 endotoxin endotoxin NOUN NN Number=Sing _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 release release VERB VB VerbForm=Inf _ _ _ _ 20 arachidonate arachidonate NOUN NN Number=Sing _ _ _ _ 21 following follow VERB VBG VerbForm=Ger _ _ _ _ 22 transfection transfection NOUN NN Number=Sing _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 CD14 CD14 PROPN NNP Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 CHO/CD CHO/CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 14 14 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 10780 # text = Nuclear translocation of cytosolic NF-kappa B is correlated with a number of LPS-inducible responses. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 translocation translocation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B b PROPN NNP Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 correlated correlate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 number number NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 18 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 10781 # text = We sought to determine if this pathway were present in CHO/CD14 cells and to elucidate the relationship of NF-kappa B activation to the CD14 receptor system. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 sought seek VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 determine determine VERB VB VerbForm=Inf _ _ _ _ 5 if if SCONJ IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 pathway pathway NOUN NN Number=Sing _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 present present ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 CHO/CD Cho/cd ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 14 14 NUM CD NumType=Card _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 elucidate elucidate VERB VB VerbForm=Inf _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 relationship relationship NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappa kappa NOUN NN Number=Sing _ _ _ _ 23 B b NOUN NN Number=Sing _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 14 14 NUM CD NumType=Card _ _ _ _ 29 receptor receptor NOUN NN Number=Sing _ _ _ _ 30 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 10782 # text = LPS-stimulated translocation of NF-kappa B in CHO/CD14 cells resembled the same response in the murine macrophage-like cell line RAW 264.7. 1 LPS Lps INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 translocation translocation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B b PROPN NNP Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 CHO/CD Cho/cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 14 14 NUM CD NumType=Card _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 resembled resemble VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 same same ADJ JJ Degree=Pos _ _ _ _ 17 response response NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 murine murine NOUN NN Number=Sing _ _ _ _ 21 macrophage macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 like like ADJ JJ Degree=Pos _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 line line NOUN NN Number=Sing _ _ _ _ 26 RAW RAW PROPN NNP Number=Sing _ _ _ _ 27 264.7 264.7 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 10783 # text = Protein synthesis inhibitors and corticosteroids, which suppress arachidonate release and the synthesis of proinflammatory cytokines, had no effect on translocation of NF-kappa B in CHO/CD14 or RAW 264.7 cells, demonstrating that NF-kappa B translocation is an early event. 1 Protein protein NOUN NN Number=Sing _ _ _ _ 2 synthesis synthesis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 corticosteroids corticosteroid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 suppress suppress VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 arachidonate arachidonate ADJ JJ Degree=Pos _ _ _ _ 10 release release NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 16 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 no no DET DT _ _ _ _ _ 20 effect effect NOUN NN Number=Sing _ _ _ _ 21 on on ADP IN _ _ _ _ _ 22 translocation translocation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa PROPN NNP Number=Sing _ _ _ _ 27 B b PROPN NNP Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 CHO/CD14 CHO/CD14 PROPN NNP Number=Sing _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 RAW RAW PROPN NNP Number=Sing _ _ _ _ 32 264.7 264.7 NUM CD NumType=Card _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 demonstrating demonstrat VERB VBG VerbForm=Ger _ _ _ _ 36 that that SCONJ IN _ _ _ _ _ 37 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 kappa kappa NOUN NN Number=Sing _ _ _ _ 40 B b NOUN NN Number=Sing _ _ _ _ 41 translocation translocation NOUN NN Number=Sing _ _ _ _ 42 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 43 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 44 early early ADJ JJ Degree=Pos _ _ _ _ 45 event event NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 10784 # text = Although TK activity was consistently observed by immunoblotting extracts from activated RAW 264.7 cells, LPS-induced phosphotyrosine residues were not observed from similarly treated CHO/CD14 cells. 1 Although although SCONJ IN _ _ _ _ _ 2 TK TK PROPN NNP Number=Sing _ _ _ _ 3 activity activity NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 consistently consistently ADV RB _ _ _ _ _ 6 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by SCONJ IN _ _ _ _ _ 8 immunoblotting immunoblott VERB VBG VerbForm=Ger _ _ _ _ 9 extracts extract NOUN NNS Number=Plur _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 RAW RAW PROPN NNP Number=Sing _ _ _ _ 13 264.7 264.7 NUM CD NumType=Card _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 phosphotyrosine phosphotyrosine NOUN NN Number=Sing _ _ _ _ 20 residues residue NOUN NNS Number=Plur _ _ _ _ 21 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 similarly similarly ADV RB _ _ _ _ _ 26 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 CHO/CD Cho/cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 14 14 NUM CD NumType=Card _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 10785 # text = Furthermore, the TK inhibitors herbimycin A and genistein failed to inhibit translocation of NF-kappa B in CHO/CD14 or RAW 264.7 cells, although both of these agents inhibited LPS-induced TK activity in RAW 264.7 cells. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 TK TK PROPN NNP Number=Sing _ _ _ _ 5 inhibitors inhibitor VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 herbimycin herbimycin ADJ JJ Degree=Pos _ _ _ _ 7 A a NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 genistein genistein NOUN NN Number=Sing _ _ _ _ 10 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 13 translocation translocation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B b PROPN NNP Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 CHO/CD14 CHO/CD14 PROPN NNP Number=Sing _ _ _ _ 21 or or CCONJ CC _ _ _ _ _ 22 RAW RAW PROPN NNP Number=Sing _ _ _ _ 23 264.7 264.7 NUM CD NumType=Card _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 although although SCONJ IN _ _ _ _ _ 27 both both DET DT _ _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 30 agents agent NOUN NNS Number=Plur _ _ _ _ 31 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 LPS Lp NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 TK TK PROPN NNP Number=Sing _ _ _ _ 36 activity activity NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 RAW RAW PROPN NNP Number=Sing _ _ _ _ 39 264.7 264.7 NUM CD NumType=Card _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 10786 # text = These results imply that TK activity is not obligatory for CD14-mediated signal transduction to occur in response to LPS. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 imply imply ADV RB _ _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 TK TK PROPN NNP Number=Sing _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 obligatory obligatory ADJ JJ Degree=Pos _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 CD14 CD14 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT : _ _ _ _ SpaceAfter=No 13 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 signal signal ADJ JJ Degree=Pos _ _ _ _ 15 transduction transduction NOUN NN Number=Sing _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 occur occur VERB VB VerbForm=Inf _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10787 # text = Document 0030012318 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012318 0030012318 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10788 # text = Itk, a T cell-specific tyrosine kinase, is required for CD2-mediated interleukin-2 promoter activation in the human T cell line Jurkat. 1 Itk Itk PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 T T PROPN NNP Number=Sing _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 9 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 CD2 CD2 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT : _ _ _ _ SpaceAfter=No 16 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ _ 20 promoter promoter NOUN NN Number=Sing _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 T T PROPN NNP Number=Sing _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 line line NOUN NN Number=Sing _ _ _ _ 28 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10789 # text = We investigated the functional role of Itk, a member of the cytoplasmic tyrosine kinase Tec family, in T cell activation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 functional functional ADJ JJ Degree=Pos _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Itk Itk PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 member member NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 14 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 15 kinase kinase NOUN NN Number=Sing _ _ _ _ 16 Tec Tec PROPN NNP Number=Sing _ _ _ _ 17 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 10790 # text = Stimulation of either CD2 or T cell receptor (TCR)/CD3 on Tcells by monoclonal antibody-mediated cross-linking induced tyrosine phosphorylation of Itk, which was maximal as early as 1 min after stimulation. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 either either CCONJ CC _ _ _ _ _ 4 CD2 CD2 NUM CD NumType=Card _ _ _ _ 5 or or CCONJ CC _ _ _ _ _ 6 T t NUM CD NumType=Card _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 TCR) TCR) NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 /CD3 /CD3 NOUN NN Number=Sing _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 Tcells Tcells NOUN NNS Number=Plur _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 16 antibody antibody ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 21 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 23 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 Itk Itk PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 which which PRON WDT PronType=Rel _ _ _ _ 28 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 29 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 30 as as ADV RB _ _ _ _ _ 31 early early ADV RB Degree=Pos _ _ _ _ 32 as as SCONJ IN _ _ _ _ _ 33 1 1 NUM CD NumType=Card _ _ _ _ 34 min min NOUN NNS Number=Plur _ _ _ _ 35 after after ADP IN _ _ _ _ _ 36 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 10791 # text = The tyrosine kinase activity in the anti-Itk immunoprecipitate was significantly activated upon these stimulations. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 3 kinase kinase NOUN NN Number=Sing _ _ _ _ 4 activity activity NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 anti anti X AFX _ _ _ _ SpaceAfter=No 8 -Itk -Itk ADJ JJ Degree=Pos _ _ _ _ 9 immunoprecipitate immunoprecipitate NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 significantly significantly ADV RB _ _ _ _ _ 12 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 upon upon ADP IN _ _ _ _ _ 14 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 15 stimulations stimulation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 10792 # text = Interleukin-2 (IL-2) promoter activity stimulated by cross-linking of CD2, TCR/CD3, and CD28 with antibodies was significantly reduced by transient expression of an Itk mutant lacking the kinase activity. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 -linking -linking NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 CD2 Cd2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 TCR/CD3 TCR/CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 CD28 CD28 NOUN NN Number=Sing _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 significantly significantly ADV RB _ _ _ _ _ 26 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 transient transient ADJ JJ Degree=Pos _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 Itk Itk PROPN NNP Number=Sing _ _ _ _ 33 mutant mutant NOUN NN Number=Sing _ _ _ _ 34 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 kinase kinase NOUN NN Number=Sing _ _ _ _ 37 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 10793 # text = The reduction paralleled a decrease in tyrosine phosphorylation of endogenous wild-type Itk. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 reduction reduction NOUN NN Number=Sing _ _ _ _ 3 paralleled parallel VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 decrease decrease NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 8 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 11 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 type type NOUN NN Number=Sing _ _ _ _ 14 Itk Itk NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 10794 # text = Stimulation of CD2 or TCR/CD3 induced activation of the nuclear factor of activated T cells (NFAT), the binding site of which is included in the IL-2 gene promoter. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 CD2 CD2 NOUN NN Number=Sing _ _ _ _ 4 or or CCONJ CC _ _ _ _ _ 5 TCR/ TCR/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 site site NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 which which PRON WDT PronType=Rel _ _ _ _ 26 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 included include VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 2 2 NUM CD NumType=Card _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ _ 34 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 10795 # text = The activation of NFAT was also impaired by expression of the Itk mutant. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 impaired impaire VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 Itk Itk PROPN NNP Number=Sing _ _ _ _ 13 mutant mutant NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 10796 # text = These results demonstrate that Itk plays a role in IL-2 production, indicating a critical involvement of Itk in the initial stage of T cell activation by mediating signals from the TCR/CD3 complex, CD2, and CD28. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Itk Itk PROPN NNP Number=Sing _ _ _ _ 6 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 critical critical ADJ JJ Degree=Pos _ _ _ _ 18 involvement involvement NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 Itk Itk PROPN NNP Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 initial initial ADJ JJ Degree=Pos _ _ _ _ 24 stage stage NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 T t PROPN NNP Number=Sing _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 by by SCONJ IN _ _ _ _ _ 30 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 31 signals signal NOUN NNS Number=Plur _ _ _ _ 32 from from ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 TCR/CD3 TCR/CD3 NOUN NN Number=Sing _ _ _ _ 35 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 CD2 Cd2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 CD28 CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10797 # text = Document 0030012321 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012321 0030012321 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10798 # text = Involvement of a second lymphoid-specific enhancer element in the regulation of immunoglobulin heavy-chain gene expression. 1 Involvement involvement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 5 lymphoid lymphoid NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 9 element element NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 regulation regulation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 15 heavy heavy ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 chain chain NOUN NN Number=Sing _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10799 # text = To determine whether enhancer elements in addition to the highly conserved octamer (OCTA)-nucleotide motif are important for lymphoid-specific expression of the immunoglobulin heavy-chain (IgH) gene, we have investigated the effect of mutating the binding site for a putative additional lymphoid-specific transcription factor, designated NF-microB, in the murine IgH enhancer. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 5 elements element NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 addition addition NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 highly highly ADV RB _ _ _ _ _ 11 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 octamer octamer NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 OCTA OCTA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 nucleotide nucleotide ADJ JJ Degree=Pos _ _ _ _ 18 motif motif NOUN NN Number=Sing _ _ _ _ 19 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 important important ADJ JJ Degree=Pos _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 29 heavy heavy ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 chain chain NOUN NN Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 IgH IgH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 38 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 39 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 effect effect NOUN NN Number=Sing _ _ _ _ 42 of of SCONJ IN _ _ _ _ _ 43 mutating mutat VERB VBG VerbForm=Ger _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 binding binding VERB VBG VerbForm=Ger _ _ _ _ 46 site site NOUN NN Number=Sing _ _ _ _ 47 for for ADP IN _ _ _ _ _ 48 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 49 putative putative ADJ JJ Degree=Pos _ _ _ _ 50 additional additional ADJ JJ Degree=Pos _ _ _ _ 51 lymphoid lymphoid NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 specific specific ADJ JJ Degree=Pos _ _ _ _ 54 transcription transcription NOUN NN Number=Sing _ _ _ _ 55 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 , , PUNCT , _ _ _ _ _ 57 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 58 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 59 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 60 microB microB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 61 , , PUNCT , _ _ _ _ _ 62 in in ADP IN _ _ _ _ _ 63 the the DET DT Definite=Def|PronType=Art _ _ _ _ 64 murine murine NOUN NN Number=Sing _ _ _ _ 65 IgH Igh ADP IN _ _ _ _ _ 66 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 67 . . PUNCT . _ _ _ _ _ # sent_id = 10800 # text = We demonstrate that the NF-microB-binding site plays a critical role in the IgH enhancer, because mutation of the microB DNA motif decreased transcriptional activity of the IgH enhancer in cells of the B-cell lineage but not in nonlymphoid cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 microB microb NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 site site NOUN NN Number=Sing _ _ _ _ 11 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 critical critical ADJ JJ Degree=Pos _ _ _ _ 14 role role NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 IgH IgH PROPN NNP Number=Sing _ _ _ _ 18 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 because because SCONJ IN _ _ _ _ _ 21 mutation mutation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 microB microB PROPN NNP Number=Sing _ _ _ _ 25 DNA dna NOUN NN Number=Sing _ _ _ _ 26 motif motif NOUN NN Number=Sing _ _ _ _ 27 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 29 activity activity NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 IgH Igh PROPN NNP Number=Sing _ _ _ _ 33 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 lineage lineage NOUN NN Number=Sing _ _ _ _ 42 but but CCONJ CC _ _ _ _ _ 43 not not PART RB _ _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 nonlymphoid nonlymphoid ADJ JJ Degree=Pos _ _ _ _ 46 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 10801 # text = This effect was comparable to or even stronger than the effect of a mutation in the OCTA site. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 comparable comparable ADJ JJ Degree=Pos _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 even even ADV RB _ _ _ _ _ 8 stronger stronger ADJ JJR Degree=Cmp _ _ _ _ 9 than than ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 effect effect NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 mutation mutation NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 OCTA OCTA PROPN NNP Number=Sing _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 10802 # text = Moreover, combined mutation of both microB and OCTA sites further reduced enhancer activity in lymphoid cells. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 mutation mutation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 both both CCONJ CC _ _ _ _ _ 7 microB microB PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 OCTA OCTA PROPN NNP Number=Sing _ _ _ _ 10 sites site NOUN NNS Number=Plur _ _ _ _ 11 further further ADV RB _ _ _ _ _ 12 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 10803 # text = Interestingly, alteration of either the microB or E3 site in a 70-base-pair fragment of the IgH enhancer that lacks the binding site for OCTA abolished enhancer activity in lymphoid cells completely. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 alteration alteration NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 either either CCONJ CC _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 microB microb NOUN NN Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 E3 E3 NUM CD NumType=Card _ _ _ _ 10 site site NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 70 70 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 base base NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 pair pair NOUN NN Number=Sing _ _ _ _ 18 fragment fragment NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 IgH Igh ADJ JJ Degree=Pos _ _ _ _ 22 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 23 that that PRON WDT PronType=Rel _ _ _ _ 24 lacks lack VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 binding bind VERB VBG VerbForm=Ger _ _ _ _ 27 site site NOUN NN Number=Sing _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 OCTA OCTA PROPN NNP Number=Sing _ _ _ _ 30 abolished abolish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 32 activity activity NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ _ 36 completely completely ADV RB _ _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 10804 # text = Nevertheless, a multimer of the microB motif alone showed no enhancer activity. 1 Nevertheless nevertheless ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 multimer multimer NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 microB microB PROPN NNP Number=Sing _ _ _ _ 8 motif motif NOUN NN Number=Sing _ _ _ _ 9 alone alone ADV RB _ _ _ _ _ 10 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 no no DET DT _ _ _ _ _ 12 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 10805 # text = DNase footprinting analysis corroborated the functional data showing that a lymphoid-specific protein binds to the microB DNA motif. 1 DNase DNase NOUN NN Number=Sing _ _ _ _ 2 footprinting footprint NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 corroborated corroborate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 functional functional ADJ JJ Degree=Pos _ _ _ _ 7 data data NOUN NN Number=Sing _ _ _ _ 8 showing show VERB VBG VerbForm=Ger _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 lymphoid lymphoid NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 binds bind NOUN NNS Number=Plur _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 microB microB PROPN NNP Number=Sing _ _ _ _ 19 DNA dna NOUN NN Number=Sing _ _ _ _ 20 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 10806 # text = Our results suggest that the microB element is a new crucial element important for lymphoid-specific expression of the IgH gene but that interaction with another enhancer element is essential for its activity. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 microB microb NOUN NN Number=Sing _ _ _ _ 7 element element NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 new new ADJ JJ Degree=Pos _ _ _ _ 11 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ _ 13 important important ADJ JJ Degree=Pos _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 IgH Igh ADJ JJ Degree=Pos _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 but but CCONJ CC _ _ _ _ _ 24 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 25 interaction interaction NOUN NN Number=Sing _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 another another DET DT _ _ _ _ _ 28 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 29 element element NOUN NN Number=Sing _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 essential essential ADJ JJ Degree=Pos _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 34 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10807 # text = Document 0030012328 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012328 0030012328 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10808 # text = Molecular regulation of cytokine gene expression during the immune response. 1 Molecular Molecular ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 during during ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 immune immune ADJ JJ Degree=Pos _ _ _ _ 10 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10809 # text = Cytokine expression by immune system cells plays an important role in the regulation of the immune response. 1 Cytokine Cytokine NOUN NN Number=Sing _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 immune immune ADJ JJ Degree=Pos _ _ _ _ 5 system system NOUN NN Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 important important ADJ JJ Degree=Pos _ _ _ _ 10 role role NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 regulation regulation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 immune immune ADJ JJ Degree=Pos _ _ _ _ 17 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 10810 # text = On first encounter with antigen, naive CD4+ T helper (Th) cells differentiate into cytokine-producing effector cells. 1 On on ADP IN _ _ _ _ _ 2 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 encounter encounter NOUN NN Number=Sing _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 antigen antigen ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 naive naive ADJ JJ Degree=Pos _ _ _ _ 8 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 + + SYM SYM _ _ _ _ _ 10 T t NUM CD NumType=Card _ _ _ _ 11 helper helper NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 Th th NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 differentiate differentiate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 into into ADP IN _ _ _ _ _ 18 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 producing produce VERB VBG VerbForm=Ger _ _ _ _ 21 effector effector NOUN NN Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 10811 # text = Two types of effector cells characterized by their distinct expression of cytokine profiles have been described. 1 Two two NUM CD NumType=Card _ _ _ _ 2 types type NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 effector effector NOUN NN Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 9 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 13 profiles profile NOUN NNS Number=Plur _ _ _ _ 14 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 16 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 10812 # text = Th1 cells produce IL-2 and IFN-gamma, whereas Th2 cells produce IL-4, IL-5, IL-6, IL-10, and IL-13. 1 Th1 Th1 NUM CD NumType=Card _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 produce produce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 whereas whereas SCONJ IN _ _ _ _ _ 13 Th2 Th2 NUM CD NumType=Card _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 produce produce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 -4 -4 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 IL il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 10813 # text = In many pathological situations, the balance between Th1 and Th2 immune responses determines the outcome of diverse immunologically mediated clinical syndromes including infectious, autoimmune, and allergic diseases. 1 In in ADP IN _ _ _ _ _ 2 many many ADJ JJ Degree=Pos _ _ _ _ 3 pathological pathological ADJ JJ Degree=Pos _ _ _ _ 4 situations situation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 balance balance NOUN NN Number=Sing _ _ _ _ 8 between between ADP IN _ _ _ _ _ 9 Th1 Th1 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 Th2 Th2 NUM CD NumType=Card _ _ _ _ 12 immune immune ADJ JJ Degree=Pos _ _ _ _ 13 responses response NOUN NNS Number=Plur _ _ _ _ 14 determines determine VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 outcome outcome NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 diverse diverse ADJ JJ Degree=Pos _ _ _ _ 19 immunologically immunologically ADV RB _ _ _ _ _ 20 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 22 syndromes syndrome NOUN NNS Number=Plur _ _ _ _ 23 including include VERB VBG VerbForm=Ger _ _ _ _ 24 infectious infectious ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 autoimmune autoimmune NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 allergic allergic ADJ JJ Degree=Pos _ _ _ _ 30 diseases disease NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 10814 # text = However, the molecular basis for the tissue-specific expression of Th1/Th2-like cytokines has remained elusive. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 5 basis basis NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 specific specific ADJ JJ Degree=Pos _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Th1 Th1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 / / SYM SYM _ _ _ _ SpaceAfter=No 15 Th2 Th2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 -like -like ADJ JJ Degree=Pos _ _ _ _ 17 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 18 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 remained remain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 elusive elusive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 10815 # text = In this review we evaluate the possible in vivo role of different transcription factors and transcriptional mechanisms in T cell differentiation and the immune response. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 review review NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 evaluate evaluate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 possible possible ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 vivo vivo ADJ JJ Degree=Pos _ _ _ _ 10 role role NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 different different ADJ JJ Degree=Pos _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factors factor NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 17 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 immune immune ADJ JJ Degree=Pos _ _ _ _ 25 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10816 # text = Document 0030012330 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012330 0030012330 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10817 # text = Characterization of NF(P), the nuclear factor that interacts with the regulatory P sequence (5'-CGAAAATTTCC-3') of the human interleukin-4 gene: relationship to NF-kappa B and NF-AT. 1 Characterization Characterization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 P p PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 interacts interact VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 16 P p NOUN NN Number=Sing _ _ _ _ 17 sequence sequence NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 5'-CGAAAATTTCC 5'-cgaaaatttcc NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 4 4 NUM CD NumType=Card _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 : : PUNCT : _ _ _ _ _ 32 relationship relationship NOUN NN Number=Sing _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 kappa kappa PROPN NNP Number=Sing _ _ _ _ 37 B b PROPN NNP Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 AT at PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10818 # text = The P sequence of the human interleukin-4 (IL-4) gene, which was defined as a responsive element for phorbol 12-myristate 13-acetate and calcium ionophore (A23187) in Jurkat 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 P p NOUN NN Number=Sing _ _ _ _ 3 sequence sequence NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 4 4 NUM CD NumType=Card _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 23 element element NOUN NN Number=Sing _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 26 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - PUNCT : _ _ _ _ SpaceAfter=No 28 myristate myristate NOUN NN Number=Sing _ _ _ _ 29 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 acetate acetate NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 calcium calcium NOUN NN Number=Sing _ _ _ _ 34 ionophore ionophore ADV RB _ _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 A23187 A23187 X LS _ _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ # sent_id = 10819 # text = T cells, shares sequence similarity with the NF-kappa B and the NF-AT binding sites. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 shares share NOUN NNS Number=Plur _ _ _ _ 5 sequence sequence NOUN NN Number=Sing _ _ _ _ 6 similarity similarity NOUN NN Number=Sing _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 AT AT SCONJ IN _ _ _ _ _ 18 binding binding VERB VBG VerbForm=Ger _ _ _ _ 19 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 10820 # text = We examined whether NF(P), a nuclear factor specific for the P sequence, is related to NF-kappa B and NF-AT. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 P P PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 P P NOUN NN Number=Sing _ _ _ _ 16 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 related related ADJ JJ Degree=Pos _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa PROPN NNP Number=Sing _ _ _ _ 24 B B PROPN NNP Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 AT at PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 10821 # text = NF-kappa B (P65 or P65/P50 heterodimer) bound to the P sequence in electrophoretic mobility shift assays (EMSA) and activated transcription through the P sequence when expression plasmids were cotransfected with P sequence-driven reporter plasmids in Jurkat T cells. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 P65 P65 NUM CD NumType=Card _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 P65 P65 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 / / SYM SYM _ _ _ _ SpaceAfter=No 10 P50 P50 NUM CD NumType=Card _ _ _ _ 11 heterodimer heterodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 bound bound ADJ JJ Degree=Pos _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 P p NOUN NN Number=Sing _ _ _ _ 17 sequence sequence NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 20 mobility mobility NOUN NN Number=Sing _ _ _ _ 21 shift shift NOUN NN Number=Sing _ _ _ _ 22 assays assay NOUN NNS Number=Plur _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 EMSA EMSA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 through through ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 P P NOUN NN Number=Sing _ _ _ _ 32 sequence sequence NOUN NN Number=Sing _ _ _ _ 33 when when ADV WRB PronType=Int _ _ _ _ 34 expression expression NUM CD NumType=Card _ _ _ _ 35 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 36 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 37 cotransfected cotransfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 with with ADP IN _ _ _ _ _ 39 P p NOUN NN Number=Sing _ _ _ _ 40 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 reporter reporter NOUN NN Number=Sing _ _ _ _ 44 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 47 T T PROPN NNP Number=Sing _ _ _ _ 48 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 10822 # text = In EMSAs, NF(P) binding was inhibited by the unlabeled NF-AT binding site but not by the unlabeled AP1 binding site and purified NF-AT contained an activity that bound to the P sequence. 1 In in ADP IN _ _ _ _ _ 2 EMSAs EMSAs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 P p PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 binding binding NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 unlabeled unlabel ADJ JJ Degree=Pos _ _ _ _ 14 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 AT at SCONJ IN _ _ _ _ _ 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 not not ADV RB _ _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 unlabeled unlabel ADJ JJ Degree=Pos _ _ _ _ 24 AP1 Ap1 NOUN NN Number=Sing _ _ _ _ 25 binding bind VERB VBG VerbForm=Ger _ _ _ _ 26 site site NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 purified purify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 AT at ADV RB _ _ _ _ _ 32 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 activity activity NOUN NN Number=Sing _ _ _ _ 35 that that SCONJ IN _ _ _ _ _ 36 bound bound ADJ JJ Degree=Pos _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 P P NOUN NN Number=Sing _ _ _ _ 40 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 10823 # text = Both mobility shift and sequence specificity of NF-AT were similar to those of NF(P) and only a small amount of P65 was detected in NF(P) in crude nuclear extracts. 1 Both both DET DT _ _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 sequence sequence NOUN NN Number=Sing _ _ _ _ 6 specificity specificity NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 AT AT PRON WDT PronType=Rel _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 similar similar ADJ JJ Degree=Pos _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 P p PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 only only ADV RB _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 small small ADJ JJ Degree=Pos _ _ _ _ 24 amount amount NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 P65 P65 PROPN NNP Number=Sing _ _ _ _ 27 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 28 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 P P PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 crude crude ADJ JJ Degree=Pos _ _ _ _ 36 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 37 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 10824 # text = These results indicate that the component(s) of NF-AT has the potential to reconstitute NF(P) whereas NF-kappa B alone cannot account for NF(P) in crude extracts. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 component component NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 s s X AFX _ _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 AT AT PROPN NNP Number=Sing _ _ _ _ 14 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 potential potential NOUN NN Number=Sing _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 reconstitute reconstitute VERB VB VerbForm=Inf _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 P P PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 whereas whereas SCONJ IN _ _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa NOUN NN Number=Sing _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ _ 28 alone alone ADV RB _ _ _ _ _ 29 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 30 not not PART RB _ _ _ _ _ 31 account account VERB VB VerbForm=Inf _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 P P PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 crude crude ADJ JJ Degree=Pos _ _ _ _ 39 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 10825 # text = Unlike NF-AT, NF(P) does not contain AP1 as its DNA binding component. 1 Unlike unlike ADP IN _ _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 P p PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 contain contain VERB VB VerbForm=Inf _ _ _ _ 13 AP1 Ap1 NUM CD NumType=Card _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ _ 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 component component NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10826 # text = Document 0030012342 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012342 0030012342 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10827 # text = Activation of early growth response 1 gene transcription and pp90rsk during induction of monocytic differentiation. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 early early ADJ JJ Degree=Pos _ _ _ _ 4 growth growth NOUN NN Number=Sing _ _ _ _ 5 response response NOUN NN Number=Sing _ _ _ _ 6 1 1 NUM CD NumType=Card _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 pp90rsk pp90rsk NOUN NN Number=Sing _ _ _ _ 11 during during ADP IN _ _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10828 # text = The present work has studied mechanisms responsible for induction of early growth response 1 (EGR-1) gene expression during monocytic differentiation of U-937 myeloid leukemia cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 work work NOUN NN Number=Sing _ _ _ _ 4 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 studied studie VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 7 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 early early ADJ JJ Degree=Pos _ _ _ _ 12 growth growth NOUN NN Number=Sing _ _ _ _ 13 response response NOUN NN Number=Sing _ _ _ _ 14 1 1 NUM CD NumType=Card _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 EGR Egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 during during ADP IN _ _ _ _ _ 23 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 24 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 937 937 NUM CD NumType=Card _ _ _ _ 29 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 30 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 10829 # text = Differentiation of U-937 cells with 12-O-tetradecanoylphorbol-13-acetate (TPA), an activator of the serine/threonine protein kinase C, was associated with transcriptional activation of EGR-1 promoter-reporter constructs. 1 Differentiation Differentiation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 937 937 NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 12-O-tetradecanoylphorbol 12-O-tetradecanoylphorbol PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 -acetate -acetate NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 activator activator NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 threonine threonine NUM CD NumType=Card _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 kinase kinase NOUN NN Number=Sing _ _ _ _ 24 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 EGR EGR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ _ 35 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 reporter reporter NOUN NN Number=Sing _ _ _ _ 38 constructs construct NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 10830 # text = The EGR-1 promoter contains six CC(A/T)6GG (CArG) motifs. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 EGR Egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ _ 6 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 six six NUM CD NumType=Card _ _ _ _ 8 CC cc NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 A/T A/T NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 6GG 6gg NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 CArG CArG NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 10831 # text = The two 5'-most distal CArG sequences conferred TPA inducibility. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 most most ADV RBS _ _ _ _ _ 7 distal distal ADJ JJ Degree=Pos _ _ _ _ 8 CArG CArG PROPN NNP Number=Sing _ _ _ _ 9 sequences sequence NOUN NNS Number=Plur _ _ _ _ 10 conferred confer VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 TPA TPA DET DT Definite=Ind|PronType=Art _ _ _ _ 12 inducibility inducibility NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 10832 # text = In contrast, there was little effect of TPA on EGR-1 transcription in a TPA-resistant U-937 cell variant, designated TUR. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 there there PRON EX _ _ _ _ _ 5 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 little little ADJ JJ Degree=Pos _ _ _ _ 7 effect effect NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 TPA TPA PROPN NNP Number=Sing _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 EGR EGR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 TPA TPa NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 resistant resistant NOUN NN Number=Sing _ _ _ _ 20 U u PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 937 937 NUM CD NumType=Card _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 variant variant NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 TUR Tur NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 10833 # text = Treatment of both U-937 and TUR cells with okadaic acid, an inhibitor of serine/threonine protein phosphatases 1 and 2A, was associated with induction of monocytic differentiation and EGR-1 transcription through the 5'-most CArG element. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 both both DET DT _ _ _ _ _ 4 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 937 937 NUM CD NumType=Card _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 TUR Tur NUM CD NumType=Card _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 12 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 / / PUNCT , _ _ _ _ SpaceAfter=No 19 threonine threonine NUM CD NumType=Card _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ _ 22 1 1 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 2A 2a NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 induction induction NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 32 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 EGR Egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ _ 37 transcription transcription NOUN NN Number=Sing _ _ _ _ 38 through through ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 42 - - PUNCT , _ _ _ _ SpaceAfter=No 43 most most ADJ JJS Degree=Sup _ _ _ _ 44 CArG Carg NOUN NN Number=Sing _ _ _ _ 45 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 10834 # text = Since these findings supported the involvement of serine/threonine protein phosphorylation in the regulation of EGR-1 expression, we studied activation of the 40S ribosomal protein S6 serine/threonine kinases, pp70S6K and pp90rsk. 1 Since since SCONJ IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 findings finding NOUN NNS Number=Plur _ _ _ _ 4 supported support VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 involvement involvement NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 / / PUNCT , _ _ _ _ SpaceAfter=No 10 threonine threonine NUM CD NumType=Card _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 regulation regulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 EGR EGR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 23 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 S s NOUN NN Number=Sing _ _ _ _ 29 ribosomal ribosomal ADJ JJ Degree=Pos _ _ _ _ 30 protein protein NOUN NN Number=Sing _ _ _ _ 31 S6 S6 NUM CD NumType=Card _ _ _ _ 32 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 / / PUNCT , _ _ _ _ SpaceAfter=No 34 threonine threonine NUM CD NumType=Card _ _ _ _ 35 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 pp70S6 pp70S6 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 K k NUM CD NumType=Card _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 pp90rsk pp90rsk NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 10835 # text = Although both kinases participate in regulating cell growth, there was no detectable activation of pp70S6K during TPA- or okadaic acid-induced monocytic differentiation. 1 Although although SCONJ IN _ _ _ _ _ 2 both both DET DT _ _ _ _ _ 3 kinases kinase NOUN NNS Number=Plur _ _ _ _ 4 participate participate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 in in SCONJ IN _ _ _ _ _ 6 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 there there PRON EX _ _ _ _ _ 11 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 no no DET DT _ _ _ _ _ 13 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 pp70S6 pp70S6 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 K k NUM CD NumType=Card _ _ _ _ 18 during during ADP IN _ _ _ _ _ 19 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ _ 21 or or CCONJ CC _ _ _ _ _ 22 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 23 acid acid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 27 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 10836 # text = Moreover, rapamycin, an inhibitor of pp70S6K activation, had no effect on induction of EGR-1 expression. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 rapamycin rapamycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 pp70S6 pp70S6 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 K k NUM CD NumType=Card _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 no no DET DT _ _ _ _ _ 14 effect effect NOUN NN Number=Sing _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 EGR EGR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10837 # text = In contrast, analysis of pp90rsk activity by phosphorylation of a peptide derived from S6 protein demonstrated stimulation of this kinase in TPA-treated U-937, and not TUR, cells. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 pp90rsk pp90rsk NOUN NN Number=Sing _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 peptide peptide NOUN NN Number=Sing _ _ _ _ 13 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 S6 S6 NUM CD NumType=Card _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 21 kinase kinase NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 U u PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 937 937 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 not not ADV RB _ _ _ _ _ 32 TUR Tur ADV RB _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 10838 # text = Okadaic acid treatment of both cell types was associated with activation of pp90rsk. 1 Okadaic Okadaic ADJ JJ Degree=Pos _ _ _ _ 2 acid acid ADJ JJ Degree=Pos _ _ _ _ 3 treatment treatment NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 both both DET DT _ _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 types type NOUN NNS Number=Plur _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 pp90rsk pp90rsk NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10839 # text = Document 0030012356 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012356 0030012356 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10840 # text = Human immunodeficiency virus type 1 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 3 virus virus NOUN NN Number=Sing _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ _ 5 1 1 NUM CD NumType=Card _ _ _ _ # sent_id = 10841 # text = Tat upregulates interleukin-2 secretion in activated T cells. 1 Tat Tat VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 upregulates upregulate X GW _ _ _ _ _ 3 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 secretion secretion NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10842 # text = Dysregulation of cytokines secreted by T cells may play an important role in the pathogenesis of AIDS. 1 Dysregulation Dysregulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 4 secreted secret VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 may may AUX MD VerbForm=Fin _ _ _ _ 9 play play VERB VB VerbForm=Inf _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 important important ADJ JJ Degree=Pos _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 AIDS aids NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 10843 # text = To investigate the effects of human immunodeficiency virus type 1 (HIV-1) 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effects effect NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 8 virus virus NOUN NN Number=Sing _ _ _ _ 9 type type NOUN NN Number=Sing _ _ _ _ 10 1 1 NUM CD NumType=Card _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ # sent_id = 10844 # text = Tat on interleukin-2 (IL-2) expression, we used IL-2 promoter-chloramphenicol acetyltransferase constructs and IL-2-secreting Jurkat T cells as a model system. 1 Tat Tat VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 on on ADP IN _ _ _ _ _ 3 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 21 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 22 constructs construct NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 secreting secreting NOUN NN Number=Sing _ _ _ _ 29 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 30 T t PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 as as ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 model model NOUN NN Number=Sing _ _ _ _ 35 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 10845 # text = Transient expression of HIV-1 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 -1 -1 NUM CD NumType=Card _ _ _ _ # sent_id = 10846 # text = Tat induced a five- to eightfold increase in IL-2 promoter activity in Jurkat T cells stimulated with phytohemagglutinin and phorbol myristate acetate. 1 Tat Tat PROPN NNP Number=Sing _ _ _ _ 2 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 five five NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 eightfold eightfold VERB VB VerbForm=Inf _ _ _ _ 8 increase increase NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 phytohemagglutinin phytohemagglutinin NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 24 myristate myristate NOUN NN Number=Sing _ _ _ _ 25 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 10847 # text = IL-2 secretion was increased more than twofold in both Jurkat T cells and primary T cells stimulated by extracellular HIV-1 1 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 secretion secretion NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 more more ADJ JJR Degree=Cmp _ _ _ _ 8 than than ADP IN _ _ _ _ _ 9 twofold twofold VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 both both DET DT _ _ _ _ _ 12 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 13 T T PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 primary primary ADJ JJ Degree=Pos _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 22 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ # sent_id = 10848 # text = Tat protein. 1 Tat Tat NOUN NN Number=Sing _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 . . PUNCT . _ _ _ _ _ # sent_id = 10849 # text = Analysis of mRNA suggested that 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 4 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ # sent_id = 10850 # text = Tat exerts its effect on IL-2 primarily at the transcriptional level. 1 Tat Tat PROPN NNP Number=Sing _ _ _ _ 2 exerts exert VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 4 effect effect NOUN NN Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 primarily primarily ADV RB _ _ _ _ _ 10 at at ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 13 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 10851 # text = The NF-kappa B site at positions -206 to -195 of the IL-2 promoter was required but not sufficient for the Tat effect. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 site site NOUN NN Number=Sing _ _ _ _ 7 at at ADP IN _ _ _ _ _ 8 positions position NOUN NNS Number=Plur _ _ _ _ 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 206 206 NUM CD NumType=Card _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 195 195 NUM CD NumType=Card _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 not not PART RB _ _ _ _ _ 24 sufficient sufficient VERB VB VerbForm=Inf _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 Tat Tat PROPN NNP Number=Sing _ _ _ _ 28 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 10852 # text = The Tat-mediated increase in IL-2 promoter activity could selectively be blocked by antisense tat or-unlike the analogous effect of human T-cell lymphotropic virus type 1 Tax-by cyclosporin A. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Tat Tat NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 increase increase NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 could could AUX MD VerbForm=Fin _ _ _ _ 13 selectively selectively ADV RB _ _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 antisense antisense NOUN NN Number=Sing _ _ _ _ 18 tat tat NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 unlike unlike ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 analogous analogous ADJ JJ Degree=Pos _ _ _ _ 24 effect effect NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 lymphotropic lymphotropic NOUN NN Number=Sing _ _ _ _ 30 virus virus NOUN NN Number=Sing _ _ _ _ 31 type type NOUN NN Number=Sing _ _ _ _ 32 1 1 NUM CD NumType=Card _ _ _ _ 33 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT , _ _ _ _ SpaceAfter=No 35 by by ADP IN _ _ _ _ _ 36 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 37 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 10853 # text = The observed increase in IL-2 levels might facilitate virus spread from or to T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 observed observed ADJ JJ Degree=Pos _ _ _ _ 3 increase increase NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 might might AUX MD VerbForm=Fin _ _ _ _ 10 facilitate facilitate VERB VB VerbForm=Inf _ _ _ _ 11 virus virus NOUN NN Number=Sing _ _ _ _ 12 spread spread NOUN NN Number=Sing _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 10854 # text = Furthermore, it might contribute to the hypergammaglobulinemia or, together with other cytokines found to be dysregulated, the T-helper cell dysfunctions observed in AIDS patients. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 4 might might AUX MD VerbForm=Fin _ _ _ _ 5 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 hypergammaglobulinemia hypergammaglobulinemia NOUN NN Number=Sing _ _ _ _ 9 or or CCONJ CC _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 together together ADV RB _ _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 other other ADJ JJ Degree=Pos _ _ _ _ 14 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 15 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 dysregulated dysregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 helper helper NOUN NN Number=Sing _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 dysfunctions dysfunction NOUN NNS Number=Plur _ _ _ _ 25 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 AIDS aids NOUN NN Number=Sing _ _ _ _ 28 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10855 # text = Document 0030012358 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012358 0030012358 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10856 # text = Pyrrolidine dithiocarbamate, a potent inhibitor of nuclear factor kappa B (NF-kappa B) activation, prevents apoptosis in human promyelocytic leukemia HL-60 cells and thymocytes. 1 Pyrrolidine Pyrrolidine NOUN NN Number=Sing _ _ _ _ 2 dithiocarbamate dithiocarbamate NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 potent potent ADJ JJ Degree=Pos _ _ _ _ 6 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 prevents prevent NOUN NNS Number=Plur _ _ _ _ 21 apoptosis apoptosis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ _ 25 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 26 HL Hl NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 60 60 NUM CD NumType=Card _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10857 # text = We examined the effect of pyrrolidine dithiocarbamate (PDTC), which potently blocks the activation of nuclear factor kappa B (NF-kappa B), on the induction of apoptosis by a variety of agents. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effect effect NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 pyrrolidine pyrrolidine NOUN NN Number=Sing _ _ _ _ 7 dithiocarbamate dithiocarbamate NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 PDTC PDTC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 potently potently ADV RB _ _ _ _ _ 14 blocks block VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 on on ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 induction induction NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 variety variety NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 agents agent NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 10858 # text = Treatment of a human promyelocytic leukemia cell line, HL-60, with 10 micrograms/mL etoposide or 2 microM 1-beta-D-arabinofuranosylcytosine induced NF-kappa B activation within 1 hr and subsequently caused apoptosis within 3-4 hr. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ _ 6 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 HL HL NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 60 60 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 10 10 NUM CD NumType=Card _ _ _ _ 16 micrograms microgram NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 mL mL ADJ JJ Degree=Pos _ _ _ _ 19 etoposide etoposide NOUN NN Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 2 2 NUM CD NumType=Card _ _ _ _ 22 microM microm NOUN NN Number=Sing _ _ _ _ 23 1-beta 1-beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 D- D- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 arabinofuranosylcytosine arabinofuranosylcytosine NOUN NN Number=Sing _ _ _ _ 27 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappa kappa PROPN NNP Number=Sing _ _ _ _ 31 B b PROPN NNP Number=Sing _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ _ 33 within within ADP IN _ _ _ _ _ 34 1 1 NUM CD NumType=Card _ _ _ _ 35 hr hr NOUN NN Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 subsequently subsequently ADV RB _ _ _ _ _ 38 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 39 apoptosis apoptosis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 40 within within ADP IN _ _ _ _ _ 41 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 - - SYM SYM _ _ _ _ SpaceAfter=No 43 4 4 NUM CD NumType=Card _ _ _ _ 44 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 10859 # text = The simultaneous addition of 50-500 microM PDTC with these agents blocked NF-kappa B activation and completely abrogated both morphologically apoptotic changes and internucleosomal DNA fragmentation for up to 6 hr. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 simultaneous simultaneous ADJ JJ Degree=Pos _ _ _ _ 3 addition addition NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 500 500 NUM CD NumType=Card _ _ _ _ 8 microM microm NUM CD NumType=Card _ _ _ _ 9 PDTC PDTC NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 12 agents agent NOUN NNS Number=Plur _ _ _ _ 13 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 completely completely ADV RB _ _ _ _ _ 21 abrogated abrogate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 both both DET DT _ _ _ _ _ 23 morphologically morphologically ADV RB _ _ _ _ _ 24 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 25 changes change NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 internucleosomal internucleosomal ADJ JJ Degree=Pos _ _ _ _ 28 DNA dna NOUN NN Number=Sing _ _ _ _ 29 fragmentation fragmentation NOUN NN Number=Sing _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 up up ADV RB _ _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 6 6 NUM CD NumType=Card _ _ _ _ 34 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 10860 # text = However, PDTC failed to inhibit the endonuclease activity contained in the whole cell lysates. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 PDTC PDTC PROPN NNP Number=Sing _ _ _ _ 4 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 endonuclease endonuclease NOUN NN Number=Sing _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 whole whole ADJ JJ Degree=Pos _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 lysates lysate NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 10861 # text = The inhibitory effect of PDTC was also observed in etoposide- and dexamethasone-induced apoptosis in human thymocytes at a concentration of 1-10 microM. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 3 effect effect NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 PDTC PDTC PROPN NNP Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 etoposide etoposide NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 dexamethasone dexamethasone VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 20 at at ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 concentration concentration NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - SYM SYM _ _ _ _ SpaceAfter=No 26 10 10 NUM CD NumType=Card _ _ _ _ 27 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 10862 # text = Since PDTC has both antioxidant and metal-ion chelating activities, we tested the effects of N-acetyl-L-cysteine (NAC) (antioxidant) or o-phenanthroline (OP) (metal-ion chelator) on the induction of apoptosis. 1 Since since SCONJ IN _ _ _ _ _ 2 PDTC PDTC PROPN NNP Number=Sing _ _ _ _ 3 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 both both CCONJ CC _ _ _ _ _ 5 antioxidant antioxidant NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 metal metal NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 ion ion NOUN NN Number=Sing _ _ _ _ 10 chelating chelating NOUN NN Number=Sing _ _ _ _ 11 activities activity NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 tested test VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 effects effect NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 acetyl acetyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 -L -l NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 NAC NAC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 antioxidant antioxidant NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 or or CCONJ CC _ _ _ _ _ 30 o-phenanthroline o-phenanthroline NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 OP op PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 metal metal NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 -ion -ion NOUN NN Number=Sing _ _ _ _ 37 chelator chelator NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 on on ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 induction induction NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 10863 # text = Pretreatment of HL-60 cells or thymocytes with 100-500 microM OP for 2 hr, but not 10-60 mM 1 Pretreatment Pretreatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 60 60 NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 100 100 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - SYM SYM _ _ _ _ SpaceAfter=No 12 500 500 NUM CD NumType=Card _ _ _ _ 13 microM microm PROPN NNP Number=Sing _ _ _ _ 14 OP op PROPN NNP Number=Sing _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 2 2 NUM CD NumType=Card _ _ _ _ 17 hr hr NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 not not ADV RB _ _ _ _ _ 21 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 -60 -60 NUM CD NumType=Card _ _ _ _ 23 mM mm NOUN NN Number=Sing _ _ _ _ # sent_id = 10864 # text = NAC, suppressed subsequent occurrence of apoptosis induced by etoposide. 1 NAC NAC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 5 occurrence occurrence NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 apoptosis apoptosis DET DT Number=Sing|PronType=Dem _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 etoposide etoposide NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 10865 # text = These results suggest that the activation of NF-kappa B plays an important role in the apoptotic process of human hematopoietic cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 important important ADJ JJ Degree=Pos _ _ _ _ 15 role role NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 19 process process NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10866 # text = Document 0030012360 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012360 0030012360 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10867 # text = The development of functionally responsive T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 development development NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 functionally functionally ADV RB _ _ _ _ _ 5 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10868 # text = The work reviewed in this article separates T cell development into four phases. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 work work NOUN NN Number=Sing _ _ _ _ 3 reviewed review VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 article article NOUN NN Number=Sing _ _ _ _ 7 separates separate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 T t NUM CD NumType=Card _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 development development NOUN NN Number=Sing _ _ _ _ 11 into into ADP IN _ _ _ _ _ 12 four four NUM CD NumType=Card _ _ _ _ 13 phases phase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 10869 # text = First is an expansion phase prior to TCR rearrangement, which appears to be correlated with programming of at least some response genes for inducibility. 1 First first ADV RB _ _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 expansion expansion NOUN NN Number=Sing _ _ _ _ 5 phase phase NOUN NN Number=Sing _ _ _ _ 6 prior prior ADJ JJ Degree=Pos _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 TCR TCR ADJ JJR Degree=Cmp _ _ _ _ 9 rearrangement rearrangement NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 correlated correlate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 programming programming NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 at at ADV RB _ _ _ _ _ 20 least least ADV RBS Degree=Sup _ _ _ _ 21 some some DET DT _ _ _ _ _ 22 response response NOUN NN Number=Sing _ _ _ _ 23 genes gene NOUN NNS Number=Plur _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 inducibility inducibility NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 10870 # text = This phase can occur to some extent outside of the thymus. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 phase phase NOUN NN Number=Sing _ _ _ _ 3 can can AUX MD VerbForm=Fin _ _ _ _ 4 occur occur VERB VB VerbForm=Inf _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 some some DET DT _ _ _ _ _ 7 extent extent NOUN NN Number=Sing _ _ _ _ 8 outside outside ADP IN _ _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 thymus thymus NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 10871 # text = However, the profound T cell deficit of nude mice indicates that the thymus is by far the most potent site for inducing the expansion per se, even if other sites can induce some response acquisition. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 profound profound ADJ JJ Degree=Pos _ _ _ _ 5 T T PROPN NNP Number=Sing _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 deficit deficit NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 nude nude ADJ JJ Degree=Pos _ _ _ _ 10 mice mouse NOUN NNS Number=Plur _ _ _ _ 11 indicates indicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 thymus thymus NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 far far ADV RB Degree=Pos _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 most most ADV RBS _ _ _ _ _ 20 potent potent ADJ JJ Degree=Pos _ _ _ _ 21 site site NOUN NN Number=Sing _ _ _ _ 22 for for SCONJ IN _ _ _ _ _ 23 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 expansion expansion NOUN NN Number=Sing _ _ _ _ 26 per per ADP IN _ _ _ _ _ 27 se se NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 even even ADV RB _ _ _ _ _ 30 if if SCONJ IN _ _ _ _ _ 31 other other ADJ JJ Degree=Pos _ _ _ _ 32 sites site NOUN NNS Number=Plur _ _ _ _ 33 can can AUX MD VerbForm=Fin _ _ _ _ 34 induce induce VERB VB VerbForm=Inf _ _ _ _ 35 some some DET DT _ _ _ _ _ 36 response response NOUN NN Number=Sing _ _ _ _ 37 acquisition acquisition NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 10872 # text = Second is a controlled phase of TCR gene rearrangement. 1 Second second ADV RB _ _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 controlled controll VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 phase phase NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 TCR TCR NOUN NN Number=Sing _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 rearrangement rearrangement NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 10873 # text = The details of the regulatory mechanism that selects particular loci for rearrangement are still not known. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 details detail NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 6 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 selects select VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 particular particular ADJ JJ Degree=Pos _ _ _ _ 10 loci loci NOUN NNS Number=Plur _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 rearrangement rearrangement NOUN NN Number=Sing _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 still still ADV RB _ _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 known known ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 10874 # text = It seems that the rearrangement of the TCR gamma loci in the gamma delta lineage may not always take place at a developmental stage strictly equivalent to the rearrangement of TCR beta in the alpha beta lineage, and it is not clear just how early the two lineages diverge. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 rearrangement rearrangement NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 TCR TCR PROPN NNP Number=Sing _ _ _ _ 9 gamma gamma NOUN NN Number=Sing _ _ _ _ 10 loci loci NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 gamma gamma NOUN NN Number=Sing _ _ _ _ 14 delta delta NOUN NN Number=Sing _ _ _ _ 15 lineage lineage NOUN NN Number=Sing _ _ _ _ 16 may may AUX MD VerbForm=Fin _ _ _ _ 17 not not PART RB _ _ _ _ _ 18 always always ADV RB _ _ _ _ _ 19 take take VERB VB VerbForm=Inf _ _ _ _ 20 place place NOUN NN Number=Sing _ _ _ _ 21 at at ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 24 stage stage NOUN NN Number=Sing _ _ _ _ 25 strictly strictly ADV RB _ _ _ _ _ 26 equivalent equivalent ADJ JJ Degree=Pos _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 rearrangement rearrangement NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 TCR Tcr NOUN NN Number=Sing _ _ _ _ 32 beta beta NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 alpha alpha NOUN NN Number=Sing _ _ _ _ 36 beta beta NOUN NN Number=Sing _ _ _ _ 37 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 41 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 42 not not PART RB _ _ _ _ _ 43 clear clear ADJ JJ Degree=Pos _ _ _ _ 44 just just ADV RB _ _ _ _ _ 45 how how ADV WRB PronType=Int _ _ _ _ 46 early early ADV RB Degree=Pos _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 two two NUM CD NumType=Card _ _ _ _ 49 lineages lineage NOUN NNS Number=Plur _ _ _ _ 50 diverge diverge NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 10875 # text = In the TCR alpha beta lineage, however, the final gene rearrangement events are accompanied by rapid proliferation and an interruption in cellular response gene inducibility. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 TCR Tcr NOUN NN Number=Sing _ _ _ _ 4 alpha alpha NOUN NN Number=Sing _ _ _ _ 5 beta beta NOUN NN Number=Sing _ _ _ _ 6 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 however however ADV RB _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 final final ADJ JJ Degree=Pos _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 rearrangement rearrangement NOUN NN Number=Sing _ _ _ _ 14 events event NOUN NNS Number=Plur _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 19 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 interruption interruption NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 25 response response NOUN NN Number=Sing _ _ _ _ 26 gene gene NOUN NN Number=Sing _ _ _ _ 27 inducibility inducibility NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 10876 # text = The loss of conventional responsiveness is probably caused by alterations at the level of signaling, and may be a manifestation of the physiological state that is a precondition for selection. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 loss loss NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 conventional conventional ADJ JJ Degree=Pos _ _ _ _ 5 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 probably probably ADV RB _ _ _ _ _ 8 caused cause VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 alterations alteration NOUN NNS Number=Plur _ _ _ _ 11 at at ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 level level NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 may may AUX MD VerbForm=Fin _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 manifestation manifestation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 physiological physiological ADJ JJ Degree=Pos _ _ _ _ 25 state state NOUN NN Number=Sing _ _ _ _ 26 that that PRON WDT PronType=Rel _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 precondition precondition NOUN NN Number=Sing _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 selection selection NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 10877 # text = Third is the complex process of selection. 1 Third third ADV RB _ _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 complex complex ADJ JJ Degree=Pos _ _ _ _ 5 process process NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 selection selection NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 10878 # text = Whereas peripheral T cells can undergo forms of positive selection (by antigen-driven clonal expansion) and negative selection (by abortive stimulation leading to anergy or death), neither is exactly the same phenomenon that occurs in the thymic cortex. 1 Whereas whereas SCONJ IN _ _ _ _ _ 2 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 can can AUX MD VerbForm=Fin _ _ _ _ 6 undergo undergo VERB VB VerbForm=Inf _ _ _ _ 7 forms form NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 positive positive ADJ JJ Degree=Pos _ _ _ _ 10 selection selection NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 by by ADP IN _ _ _ _ _ 13 antigen antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 driven driven VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 clonal clonal ADJ JJ Degree=Pos _ _ _ _ 17 expansion expansion NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 negative negative ADJ JJ Degree=Pos _ _ _ _ 21 selection selection NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 by by ADP IN _ _ _ _ _ 24 abortive abortive ADJ JJ Degree=Pos _ _ _ _ 25 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 26 leading lead VERB VBG VerbForm=Ger _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 anergy anergy NOUN NN Number=Sing _ _ _ _ 29 or or CCONJ CC _ _ _ _ _ 30 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 neither neither CCONJ CC _ _ _ _ _ 34 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 exactly exactly ADV RB _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 same same ADJ JJ Degree=Pos _ _ _ _ 38 phenomenon phenomenon NOUN NN Number=Sing _ _ _ _ 39 that that PRON WDT PronType=Rel _ _ _ _ 40 occurs occur VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 thymic thymic ADJ JJ Degree=Pos _ _ _ _ 44 cortex cortex NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 10879 # text = Negative selection in the cortex appears to be a suicidal inversion of antigen responsiveness: instead of turning on IL-2 expression, the activated cell destroys its own chromatin. 1 Negative negative ADJ JJ Degree=Pos _ _ _ _ 2 selection selection NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 cortex cortex NOUN NN Number=Sing _ _ _ _ 6 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 suicidal suicidal ADJ JJ Degree=Pos _ _ _ _ 11 inversion inversion NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 14 responsiveness responsiveness NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 : : PUNCT : _ _ _ _ _ 16 instead instead ADV RB _ _ _ _ _ 17 of of SCONJ IN _ _ _ _ _ 18 turning turn VERB VBG VerbForm=Ger _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 destroys destroy VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 30 own own ADJ JJ Degree=Pos _ _ _ _ 31 chromatin chromatin NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 10880 # text = The genes that need to be induced for this response are not yet identified, but it is unquestionably a form of activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 genes gene NOUN NNS Number=Plur _ _ _ _ 3 that that PRON WDT PronType=Rel _ _ _ _ 4 need need VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 10 response response NOUN NN Number=Sing _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 yet yet ADV RB _ _ _ _ _ 14 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 but but CCONJ CC _ _ _ _ _ 17 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 unquestionably unquestionably ADV RB _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 form form NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 10881 # text = It is interesting that in humans and rats, cortical thymocytes undergoing negative selection can still induce IL-2R alpha expression and even be rescued in vitro, if exogenous IL-2 is provided. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 interesting interesting ADJ JJ Degree=Pos _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 humans human NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 rats rat NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 cortical cortical ADJ JJ Degree=Pos _ _ _ _ 11 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 12 undergoing undergoing VERB VBG VerbForm=Ger _ _ _ _ 13 negative negative ADJ JJ Degree=Pos _ _ _ _ 14 selection selection NOUN NN Number=Sing _ _ _ _ 15 can can AUX MD VerbForm=Fin _ _ _ _ 16 still still ADV RB _ _ _ _ _ 17 induce induce VERB VB VerbForm=Inf _ _ _ _ 18 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2R 2r PROPN NNP Number=Sing _ _ _ _ 21 alpha alpha NOUN NN Number=Sing _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 even even ADV RB _ _ _ _ _ 25 be be AUX VB VerbForm=Inf _ _ _ _ 26 rescued rescue VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 if if SCONJ IN _ _ _ _ _ 31 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 32 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 2 2 NUM CD NumType=Card _ _ _ _ 35 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 provided provide VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 10882 # text = Perhaps murine thymocytes are denied this form of rescue because they shut off IL-2R beta chain expression at an earlier stage or because they may be uncommonly Bcl-2 deficient (cf. Sentman et al., 1991; Strasser et al., 1991). 1 Perhaps perhaps ADV RB _ _ _ _ _ 2 murine murine ADJ JJ Degree=Pos _ _ _ _ 3 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 denied deny VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 form form NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 rescue rescue NOUN NN Number=Sing _ _ _ _ 10 because because SCONJ IN _ _ _ _ _ 11 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 12 shut shut VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 off off ADP RP _ _ _ _ _ 14 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2R 2r PROPN NNP Number=Sing _ _ _ _ 17 beta beta NOUN NN Number=Sing _ _ _ _ 18 chain chain NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 at at ADP IN _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 earlier earlier ADJ JJR Degree=Cmp _ _ _ _ 23 stage stage NOUN NN Number=Sing _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 because because SCONJ IN _ _ _ _ _ 26 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 27 may may AUX MD VerbForm=Fin _ _ _ _ 28 be be AUX VB VerbForm=Inf _ _ _ _ 29 uncommonly uncommonly ADV RB _ _ _ _ _ 30 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 2 2 NUM CD NumType=Card _ _ _ _ 33 deficient deficient NOUN NN Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 cf. cf. X FW _ _ _ _ _ 36 Sentman Sentman X GW _ _ _ _ _ 37 et et X FW _ _ _ _ _ 38 al. al. X FW _ _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 1991 1991 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 ; ; PUNCT , _ _ _ _ _ 42 Strasser Strasser PROPN NNP Number=Sing _ _ _ _ 43 et et X FW _ _ _ _ _ 44 al. al. X FW _ _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 1991 1991 NUM CD NumType=Card _ _ _ SpaceAfter=No 47 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 10883 # text = Even so, medullary thymocytes remain at least partially susceptible to negative selection even as they continue to mature . 1 Even even ADV RB _ _ _ _ _ 2 so so ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 medullary medullary ADJ JJ Degree=Pos _ _ _ _ 5 thymocytes thymocyte NOUN NNS Number=Plur _ _ _ _ 6 remain remain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 at at ADV RB _ _ _ _ _ 8 least least ADV RBS Degree=Sup _ _ _ _ 9 partially partially ADV RB _ _ _ _ _ 10 susceptible susceptible ADJ JJ Degree=Pos _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 negative negative ADJ JJ Degree=Pos _ _ _ _ 13 selection selection NOUN NN Number=Sing _ _ _ _ 14 even even ADV RB _ _ _ _ _ 15 as as SCONJ IN _ _ _ _ _ 16 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 17 continue continue VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 mature mature VERB VB VerbForm=Inf _ _ _ _ 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10884 # text = Document 0030012361 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012361 0030012361 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10885 # text = LPS tolerance in monocytes/macrophages: three 3' cytosins are required in the DNA binding motif for detection of upregulated NF-kappa B p50 homodimers. 1 LPS Lp ADJ JJ Degree=Pos _ _ _ _ 2 tolerance tolerance NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 : : PUNCT : _ _ _ _ _ 8 three three NUM CD NumType=Card _ _ _ _ 9 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ' ' PUNCT `` _ _ _ _ _ 11 cytosins cytosin NOUN NNS Number=Plur _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ _ 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 motif motif NOUN NN Number=Sing _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 detection detection NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 upregulated upregulate ADJ JJ Degree=Pos _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa PROPN NNP Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 p50 p50 NUM CD NumType=Card _ _ _ _ 28 homodimers homodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10886 # text = When monocytes are stimulated with LPS (lipopolysaccharide) repeatedly then the initially high expression of the TNF (tumor necrosis factor) gene is only very low, i.e. the cells are tolerant to LPS. 1 When when ADV WRB PronType=Int _ _ _ _ 2 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 LPS Lps NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 repeatedly repeatedly ADV RB _ _ _ _ _ 11 then then ADV RB PronType=Dem _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 initially initially ADV RB _ _ _ _ _ 14 high high ADJ JJ Degree=Pos _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 TNF Tnf NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 tumor tumor NOUN NN Number=Sing _ _ _ _ 21 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 only only ADV RB _ _ _ _ _ 27 very very ADV RB _ _ _ _ _ 28 low low ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 i.e. i.e. X FW _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 tolerant tolerant ADJ JJ Degree=Pos _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 10887 # text = Tolerant cells still express the CD14 receptor and they can still be activated to mobilize NF-kappa B into nucleus. 1 Tolerant tolerant ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 still still ADV RB _ _ _ _ _ 4 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 14 14 NUM CD NumType=Card _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 11 can can AUX MD VerbForm=Fin _ _ _ _ 12 still still ADV RB _ _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 mobilize mobilize VERB VB VerbForm=Inf _ _ _ _ 17 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 into into ADP IN _ _ _ _ _ 22 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 10888 # text = Analysis of the binding proteins employing the -605 motif of the human TNF promoter (GGGGCTGTCCC) revealed that in tolerant cells of the human monocytic cell line Mono Mac 6 there is a predominance of p50p50 of NF-kappa B. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ _ 6 employing employ VERB VBG VerbForm=Ger _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 - - SYM SYM _ _ _ _ SpaceAfter=No 9 605 605 NUM CD NumType=Card _ _ _ _ 10 motif motif NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 TNF Tnf NOUN NN Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 GGGGCTGTCCC GGGGCTGTCCC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 tolerant tolerant ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 line line NOUN NN Number=Sing _ _ _ _ 30 Mono Mono PROPN NNP Number=Sing _ _ _ _ 31 Mac Mac PROPN NNP Number=Sing _ _ _ _ 32 6 6 NUM CD NumType=Card _ _ _ _ 33 there there PRON EX _ _ _ _ _ 34 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 predominance predominance NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 p50p50 p50p50 NUM CD NumType=Card _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 kappa kappa PROPN NNP Number=Sing _ _ _ _ 43 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 10889 # text = We now show that a mutant motif that exchanges the terminal 3' C for a G fails to bind the p50 homodimer that is upregulated in LPS toler ant human Mono Mac 6 cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 now now ADV RB _ _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 7 motif motif NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 exchanges exchange VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 terminal terminal NOUN NN Number=Sing _ _ _ _ 12 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ' ' PUNCT `` _ _ _ _ _ 14 C c NOUN NN Number=Sing _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 G g NOUN NN Number=Sing _ _ _ _ 18 fails fail VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 bind bind VERB VB VerbForm=Inf _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 p50 p50 NOUN NN Number=Sing _ _ _ _ 23 homodimer homodimer NOUN NN Number=Sing _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 upregulated upregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 LPS LPS PROPN NNP Number=Sing _ _ _ _ 29 toler toler ADV RB _ _ _ _ _ 30 ant ant VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 human human ADJ JJ Degree=Pos _ _ _ _ 32 Mono Mono PROPN NNP Number=Sing _ _ _ _ 33 Mac Mac PROPN NNP Number=Sing _ _ _ _ 34 6 6 NUM CD NumType=Card _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 10890 # text = The same is true for nuclear extracts taken from the murine P388D1 macrophage cell line when tested with the -516 motif of the murine TNF promoter (GGGGGCTTTCCC). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 same same ADJ JJ Degree=Pos _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 true true ADJ JJ Degree=Pos _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 extracts extract NOUN NNS Number=Plur _ _ _ _ 8 taken take VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 murine murine NOUN NN Number=Sing _ _ _ _ 12 P388D1 P388d1 NOUN NN Number=Sing _ _ _ _ 13 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 line line NOUN NN Number=Sing _ _ _ _ 16 when when ADV WRB PronType=Int _ _ _ _ 17 tested tested VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 - - SYM SYM _ _ _ _ SpaceAfter=No 21 516 516 NUM CD NumType=Card _ _ _ _ 22 motif motif NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 murine murine PROPN NNP Number=Sing _ _ _ _ 26 TNF Tnf PROPN NNP Number=Sing _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 GGGGGCTTTCCC GGGGGCTTTCCC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 10891 # text = Here the wild type motif gives efficient binding of p50p50 that again is upregulated in tolerant cells whereas a mutant with a 3' G shows hardly any binding of p50p50. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 wild wild ADJ JJ Degree=Pos _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ _ 5 motif motif NOUN NN Number=Sing _ _ _ _ 6 gives give VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 8 binding binding NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 p50p50 p50p50 NUM CD NumType=Card _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 again again ADV RB _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 upregulated upregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 tolerant tolerant ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 whereas whereas SCONJ IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 mutant mutant NOUN NN Number=Sing _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 ' ' PUNCT `` _ _ _ _ _ 25 G g NOUN NN Number=Sing _ _ _ _ 26 shows show NOUN NNS Number=Plur _ _ _ _ 27 hardly hardly ADV RB _ _ _ _ _ 28 any any DET DT _ _ _ _ _ 29 binding binding NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 p50p50 p50p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 10892 # text = Conversely, the murine kappa light chain enhancer motif (GGGGACTTTCCG) does not efficiently bind the nuclear p50p50 from tolerant murine P388 macrophages. 1 Conversely Conversely ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 murine murine NOUN NN Number=Sing _ _ _ _ 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 light light NOUN NN Number=Sing _ _ _ _ 7 chain chain NOUN NN Number=Sing _ _ _ _ 8 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 9 motif motif NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 GGGGACTTTCCG GGGGACTTTCCG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 efficiently efficiently ADV RB _ _ _ _ _ 16 bind bind VERB VB VerbForm=Inf _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 p50p50 p50p50 NOUN NN Number=Sing _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 tolerant tolerant NOUN NN Number=Sing _ _ _ _ 22 murine murine NOUN NN Number=Sing _ _ _ _ 23 P388 P388 NOUN NN Number=Sing _ _ _ _ 24 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 10893 # text = Binding is, however, readily detected when the 3' G is replaced by a C. 1 Binding binding NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 however however ADV RB _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 readily readily ADV RB _ _ _ _ _ 7 detected detect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 when when ADV WRB PronType=Int _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ' ' PUNCT `` _ _ _ _ _ 12 G g NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 replaced replace VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 C c NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 10894 # text = These data show that the detection of upregulated p50 homodimers in LPS tolerant cells is dependent on subtle differences in the sequence of the DNA binding motif. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 detection detection NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 upregulated upregulate ADJ JJ Degree=Pos _ _ _ _ 9 p50 p50 NUM CD NumType=Card _ _ _ _ 10 homodimers homodimer NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 LPS LPS ADJ JJ Degree=Pos _ _ _ _ 13 tolerant tolerant NOUN NN Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 subtle subtle ADJ JJ Degree=Pos _ _ _ _ 19 differences difference NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 sequence sequence NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 DNA dna NOUN NN Number=Sing _ _ _ _ 26 binding binding VERB VBG VerbForm=Ger _ _ _ _ 27 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10895 # text = Document 0030012364 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012364 0030012364 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10896 # text = Cellular disposition of sulphamethoxazole and its metabolites: implications for hypersensitivity. 1 Cellular celular ADJ JJ Degree=Pos _ _ _ _ 2 disposition disposition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 sulphamethoxazole sulphamethoxazole NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 7 metabolites metabolite NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 : : PUNCT : _ _ _ _ _ 9 implications implication NOUN NNS Number=Plur _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 hypersensitivity hypersensitivity NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10897 # text = 1. Bioactivation of sulphamethoxazole (SMX) to chemically-reactive metabolites and subsequent protein conjugation is thought to be involved in SMX hypersensitivity. 1 1 1 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ 3 Bioactivation Bioactivation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 sulphamethoxazole sulphamethoxazole NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 SMX SMX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 chemically chemically ADV RB _ _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 13 metabolites metabolite NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 conjugation conjugation NOUN NN Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 involved involved ADJ JJ Degree=Pos _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 SMX Smx ADJ JJ Degree=Pos _ _ _ _ 25 hypersensitivity hypersensitivity NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 10898 # text = We have therefore examined the cellular metabolism, disposition and conjugation of SMX and its metabolites in vitro. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 therefore therefore ADV RB _ _ _ _ _ 4 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 7 metabolism metabolism NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 disposition disposition NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 conjugation conjugation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 SMX SMX PROPN NNP Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 metabolites metabolite NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 10899 # text = 2. Flow cytometry revealed binding of N-hydroxy (SMX-NHOH) and nitroso (SMX-NO) metabolites of SMX, but not of SMX itself, to the surface of viable white blood cells. 1 2 2 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ 3 Flow flow ADJ JJ Degree=Pos _ _ _ _ 4 cytometry cytometry NOUN NN Number=Sing _ _ _ _ 5 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 binding binding VERB VBG VerbForm=Ger _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 N- n- NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 hydroxy hydroxy NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 SMX SMX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 NHOH NHOH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 nitroso nitroso NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 SMX Smx NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 NO no NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 metabolites metabolite NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 SMX SMX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 but but CCONJ CC _ _ _ _ _ 27 not not ADV RB _ _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 SMX SMX PROPN NNP Number=Sing _ _ _ _ 30 itself itself PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs|Reflex=Yes _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 surface surface NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 viable viable ADJ JJ Degree=Pos _ _ _ _ 37 white white ADJ JJ Degree=Pos _ _ _ _ 38 blood blood NOUN NN Number=Sing _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 10900 # text = Cellular haptenation by SMX-NO was reduced by exogenous glutathione (GSH). 1 Cellular cellular ADJ JJ Degree=Pos _ _ _ _ 2 haptenation haptenation NOUN NN Number=Sing _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 SMX SMX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 NO no DET DT _ _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 11 glutathione glutathione NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 GSH GSH NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 10901 # text = 3. SMX-NHOH and SMX-NO were rapidly reduced back to the parent compound by cysteine (CYS), GSH, human peripheral blood cells and plasma, suggesting that this is an important and ubiquitous bioinactivation mechanism. 1 3 3 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ 3 SMX SMX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 NHOH NHOH PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 SMX SMX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 NO no INTJ UH _ _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 rapidly rapidly ADV RB _ _ _ _ _ 12 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 back back ADV RB _ _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 parent parent NOUN NN Number=Sing _ _ _ _ 17 compound compound VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 CYS CYS INTJ UH _ _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 GSH Gsh PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 28 blood blood NOUN NN Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 plasma plasma NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 34 that that SCONJ IN _ _ _ _ _ 35 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 36 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 important important ADJ JJ Degree=Pos _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 41 bioinactivation bioinactivation NOUN NN Number=Sing _ _ _ _ 42 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 10902 # text = 4. 1 4 4 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ # sent_id = 10903 # text = Fluorescence HPLC showed that SMX-NHOH and SMX-NO depleted CYS and GSH in buffer, and to a lesser extent, in cells and plasma. 1 Fluorescence Fluorescence PROPN NNP Number=Sing _ _ _ _ 2 HPLC HPLC PROPN NNP Number=Sing _ _ _ _ 3 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 SMX SMX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 NHOH NHOH PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 SMX SMX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 NO no DET DT _ _ _ _ _ 12 depleted deplete VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 CYS CYS NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 GSH GSH NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 buffer buffer NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 lesser lesser ADJ JJR Degree=Cmp _ _ _ _ 23 extent extent NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 plasma plasma NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 10904 # text = 5. 1 5 5 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ # sent_id = 10905 # text = Neutrophil apoptosis and inhibition of neutrophil function were induced at lower concentrations of SMX-NHOH and SMX-NO than those inducing loss of membrane viability, with SMX having no effect. 1 Neutrophil Neutrophil ADJ JJ Degree=Pos _ _ _ _ 2 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 7 function function NOUN NN Number=Sing _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 at at ADP IN _ _ _ _ _ 11 lower lower ADJ JJR Degree=Cmp _ _ _ _ 12 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 SMX SMX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 NHOH NHOH PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 SMX SMX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 NO no INTJ UH _ _ _ _ _ 21 than than ADP IN _ _ _ _ _ 22 those those DET DT Number=Plur|PronType=Dem _ _ _ _ 23 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 24 loss loss NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 membrane membrane NOUN NN Number=Sing _ _ _ _ 27 viability viability NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 with with SCONJ IN _ _ _ _ _ 30 SMX SMX PROPN NNP Number=Sing _ _ _ _ 31 having have VERB VBG VerbForm=Ger _ _ _ _ 32 no no DET DT _ _ _ _ _ 33 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 10906 # text = Lymphocytes were significantly (P<0.05) more sensitive to the direct cytotoxic effects of SMX-NO than neutrophils. 1 Lymphocytes Lymphocyte NOUN NNS Number=Plur _ _ _ _ 2 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 significantly significantly ADV RB _ _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 P p NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 < < PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 0.05 0.05 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 more more ADV RBR _ _ _ _ _ 10 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 direct direct ADJ JJ Degree=Pos _ _ _ _ 14 cytotoxic cytotoxic NOUN NN Number=Sing _ _ _ _ 15 effects effect NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 SMX SMX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 NO no INTJ UH _ _ _ _ _ 20 than than ADP IN _ _ _ _ _ 21 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10907 # text = 6. Partitioning of SMX-NHOH into red blood cells was significantly (P<0.05) lower than with the hydroxylamine of dapsone. 1 6 6 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ 3 Partitioning Partitioning NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 SMX SMX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 NHOH NHOH PROPN NNP Number=Sing _ _ _ _ 8 into into ADP IN _ _ _ _ _ 9 red red ADJ JJ Degree=Pos _ _ _ _ 10 blood blood NOUN NN Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 significantly significantly ADV RB _ _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 P p NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 < < PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 0.05 0.05 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 lower lower ADJ JJR Degree=Cmp _ _ _ _ 20 than than ADP IN _ _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 hydroxylamine hydroxylamine NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 dapsone dapsone NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 10908 # text = 7. Our results suggest that the balance between oxidation of SMX to its toxic metabolites and their reduction is an important protective cellular mechanism. 1 7 7 X LS _ _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ 3 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 balance balance NOUN NN Number=Sing _ _ _ _ 9 between between ADP IN _ _ _ _ _ 10 oxidation oxidation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 SMX Smx PROPN NNP Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 toxic toxic ADJ JJ Degree=Pos _ _ _ _ 16 metabolites metabolite NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 reduction reduction NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 important important ADJ JJ Degree=Pos _ _ _ _ 23 protective protective ADJ JJ Degree=Pos _ _ _ _ 24 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 25 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 10909 # text = If an imbalance exists, haptenation of the toxic metabolites to bodily proteins including the surface of viable cells can occur, and may result in drug hypersensitivity. 1 If if SCONJ IN _ _ _ _ _ 2 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 imbalance imbalance NOUN NN Number=Sing _ _ _ _ 4 exists exist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 haptenation haptenation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 toxic toxic ADJ JJ Degree=Pos _ _ _ _ 10 metabolites metabolite NOUN NNS Number=Plur _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 bodily bodily VERB VB VerbForm=Inf _ _ _ _ 13 proteins protein NOUN NNS Number=Plur _ _ _ _ 14 including include VERB VBG VerbForm=Ger _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 surface surface NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 viable viable ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 can can AUX MD VerbForm=Fin _ _ _ _ 21 occur occur VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 may may AUX MD VerbForm=Fin _ _ _ _ 25 result result VERB VB VerbForm=Inf _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 drug drug NOUN NN Number=Sing _ _ _ _ 28 hypersensitivity hypersensitivity NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10910 # text = Document 0030012370 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012370 0030012370 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10911 # text = Induction of Mn SOD in human monocytes without inflammatory cytokine production by a mutant endotoxin. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Mn Mn PROPN NNP Number=Sing _ _ _ _ 4 SOD SOD PROPN NNP Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 8 without without ADP IN _ _ _ _ _ 9 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 10 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 11 production production NOUN NN Number=Sing _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 15 endotoxin endotoxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10912 # text = Endotoxin selectively induces monocyte 1 Endotoxin Endotoxin PROPN NNP Number=Sing _ _ _ _ 2 selectively selectively ADV RB _ _ _ _ _ 3 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 monocyte monocyte NOUN NN Number=Sing _ _ _ _ # sent_id = 10913 # text = Mn superoxide dismutase (SOD) without affecting levels of Cu,Zn SOD, catalase, or glutathione peroxidase. 1 Mn Mn ADJ JJ Degree=Pos _ _ _ _ 2 superoxide superoxide NOUN NN Number=Sing _ _ _ _ 3 dismutase dismutase NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 SOD Sod NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 without without SCONJ IN _ _ _ _ _ 8 affecting affecte VERB VBG VerbForm=Ger _ _ _ _ 9 levels level NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 Cu Cu PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ SpaceAfter=No 13 Zn Zn PROPN NNP Number=Sing _ _ _ _ 14 SOD SOD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 catalase catalase NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 glutathione glutathione VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 peroxidase peroxidase NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 10914 # text = However, little is known about the structure-activity relationship and the mechanism by which endotoxin induces Mn SOD. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 little little ADJ JJ Degree=Pos _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 about about ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 structure structure NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 relationship relationship NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 endotoxin endotoxin ADP IN _ _ _ _ _ 18 induces induce NOUN NNS Number=Plur _ _ _ _ 19 Mn Mn PROPN NNP Number=Sing _ _ _ _ 20 SOD SOD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 10915 # text = In this study we demonstrated that a mutant Escherichia coli endotoxin lacking myristoyl fatty acid at the 3' R-3-hydroxymyristate position of the lipid A moiety retained its full capacity to coagulate Limulus amoebocyte lysate compared with the wild-type E. coli endotoxin and markedly stimulated the activation of human monocyte nuclear factor-kappaB and the induction of Mn SOD mRNA and enzyme activity. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 9 Escherichia Escherichia PROPN NNP Number=Sing _ _ _ _ 10 coli coli NOUN NN Number=Sing _ _ _ _ 11 endotoxin endotoxin NOUN NN Number=Sing _ _ _ _ 12 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 13 myristoyl myristoyl ADJ JJ Degree=Pos _ _ _ _ 14 fatty fatty NOUN NN Number=Sing _ _ _ _ 15 acid acid VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 at at ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ' ' PUNCT `` _ _ _ _ _ 20 R- R- SYM SYM _ _ _ _ SpaceAfter=No 21 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 hydroxymyristate hydroxymyristate NOUN NN Number=Sing _ _ _ _ 24 position position NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 lipid lipid NOUN NN Number=Sing _ _ _ _ 28 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 moiety moiety NOUN NN Number=Sing _ _ _ _ 30 retained retain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 32 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 full full ADJ JJ Degree=Pos _ _ _ _ 34 capacity capacity NOUN NN Number=Sing _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 coagulate coagulate VERB VB VerbForm=Inf _ _ _ _ 37 Limulus Limulus PROPN NNP Number=Sing _ _ _ _ 38 amoebocyte amoebocyte NOUN NN Number=Sing _ _ _ _ 39 lysate lysate NOUN NN Number=Sing _ _ _ _ 40 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 with with ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 type type NOUN NN Number=Sing _ _ _ _ 46 E. E. NOUN NN Number=Sing _ _ _ _ 47 coli coli NOUN NN Number=Sing _ _ _ _ 48 endotoxin endotoxin NOUN NN Number=Sing _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 markedly markedly ADV RB _ _ _ _ _ 51 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 52 the the DET DT Definite=Def|PronType=Art _ _ _ _ 53 activation activation NOUN NN Number=Sing _ _ _ _ 54 of of ADP IN _ _ _ _ _ 55 human human ADJ JJ Degree=Pos _ _ _ _ 56 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 57 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 58 factor-kappaB factor-kappab NOUN NN Number=Sing _ _ _ _ 59 and and CCONJ CC _ _ _ _ _ 60 the the DET DT Definite=Def|PronType=Art _ _ _ _ 61 induction induction NOUN NN Number=Sing _ _ _ _ 62 of of ADP IN _ _ _ _ _ 63 Mn Mn PROPN NNP Number=Sing _ _ _ _ 64 SOD SOD PROPN NNP Number=Sing _ _ _ _ 65 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 66 and and CCONJ CC _ _ _ _ _ 67 enzyme enzyme ADJ JJ Degree=Pos _ _ _ _ 68 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 69 . . PUNCT . _ _ _ _ _ # sent_id = 10916 # text = However, in contrast to the wild-type endotoxin, it failed to induce significant production of tumor necrosis factor-alpha and macrophage inflammatory protein-1alpha by monocytes and did not induce the phosphorylation and nuclear translocation of mitogen-activated protein kinase. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 contrast contrast NOUN NN Number=Sing _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 type type NOUN NN Number=Sing _ _ _ _ 10 endotoxin endotoxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 13 failed fail VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 induce induce VERB VB VerbForm=Inf _ _ _ _ 16 significant significant ADJ JJ Degree=Pos _ _ _ _ 17 production production NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 tumor tumor NOUN NN Number=Sing _ _ _ _ 20 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 -alpha -alpha NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 25 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 alpha alpha NOUN NN Number=Sing _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 33 not not PART RB _ _ _ _ _ 34 induce induce VERB VB VerbForm=Inf _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 39 translocation translocation NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 - - PUNCT , _ _ _ _ SpaceAfter=No 43 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 protein protein NOUN NN Number=Sing _ _ _ _ 45 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 10917 # text = These results suggest that 1) lipid A myristoyl fatty acid, although it is important for the induction of inflammatory cytokine production by human monocytes, is not necessary for the induction of Mn SOD, 2) endotoxin-mediated induction of Mn SOD and inflammatory cytokines are regulated, at least in part, through different signal transduction pathways, and 3) failure of the mutant endotoxin to induce tumor necrosis factor-alpha production is, at least in part, due to its inability to activate mitogen-activated protein kinase. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 1 1 X LS _ _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 lipid lipid VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 myristoyl myristoyl ADJ JJ Degree=Pos _ _ _ _ 10 fatty fatty NOUN NN Number=Sing _ _ _ _ 11 acid acid VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 although although SCONJ IN _ _ _ _ _ 14 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 important important ADJ JJ Degree=Pos _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 induction induction NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 22 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 23 production production NOUN NN Number=Sing _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 not not PART RB _ _ _ _ _ 30 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 induction induction NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 Mn Mn PROPN NNP Number=Sing _ _ _ _ 36 SOD SOD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 2 2 X LS _ _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 endotoxin- endotoxin- SYM NFP _ _ _ _ SpaceAfter=No 41 mediated mediated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 induction induction NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 Mn Mn PROPN NNP Number=Sing _ _ _ _ 45 SOD SOD PROPN NNP Number=Sing _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 48 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 49 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 50 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 51 , , PUNCT , _ _ _ _ _ 52 at at ADV RB _ _ _ _ _ 53 least least ADV RBS Degree=Sup _ _ _ _ 54 in in ADP IN _ _ _ _ _ 55 part part NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 , , PUNCT , _ _ _ _ _ 57 through through ADP IN _ _ _ _ _ 58 different different ADJ JJ Degree=Pos _ _ _ _ 59 signal signal NOUN NN Number=Sing _ _ _ _ 60 transduction transduction NOUN NN Number=Sing _ _ _ _ 61 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 62 , , PUNCT , _ _ _ _ _ 63 and and CCONJ CC _ _ _ _ _ 64 3 3 X LS _ _ _ _ SpaceAfter=No 65 ) ) PUNCT -RRB- _ _ _ _ _ 66 failure failure NOUN NN Number=Sing _ _ _ _ 67 of of ADP IN _ _ _ _ _ 68 the the DET DT Definite=Def|PronType=Art _ _ _ _ 69 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 70 endotoxin endotoxin NOUN NN Number=Sing _ _ _ _ 71 to to PART TO _ _ _ _ _ 72 induce induce VERB VB VerbForm=Inf _ _ _ _ 73 tumor tumor NOUN NN Number=Sing _ _ _ _ 74 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 75 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 76 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 77 alpha alpha NOUN NN Number=Sing _ _ _ _ 78 production production NOUN NN Number=Sing _ _ _ _ 79 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 80 , , PUNCT , _ _ _ _ _ 81 at at ADV RB _ _ _ _ _ 82 least least ADV RBS Degree=Sup _ _ _ _ 83 in in ADP IN _ _ _ _ _ 84 part part NOUN NN Number=Sing _ _ _ SpaceAfter=No 85 , , PUNCT , _ _ _ _ _ 86 due due ADP IN _ _ _ _ _ 87 to to ADP IN _ _ _ _ _ 88 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 89 inability inability NOUN NN Number=Sing _ _ _ _ 90 to to PART TO _ _ _ _ _ 91 activate activate VERB VB VerbForm=Inf _ _ _ _ 92 mitogen mitogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 93 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 94 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 95 protein protein NOUN NN Number=Sing _ _ _ _ 96 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 97 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10918 # text = Document 0030012371 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012371 0030012371 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10919 # text = Of the GATA-binding proteins, only GATA-4 selectively regulates the human IL-5 gene promoter in IL-5 producing cells which express multiple GATA-binding proteins. 1 Of of ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 binding binding VERB VBG VerbForm=Ger _ _ _ _ 6 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 only only ADV RB _ _ _ _ _ 9 GATA GATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - SYM SYM _ _ _ _ SpaceAfter=No 11 4 4 NUM CD NumType=Card _ _ _ _ 12 selectively selectively ADV RB _ _ _ _ _ 13 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 5 5 NUM CD NumType=Card _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ _ 20 promoter promoter NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 5 5 NUM CD NumType=Card _ _ _ _ 25 producing producing VERB VBG VerbForm=Ger _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 which which PRON WDT PronType=Rel _ _ _ _ 28 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 30 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 binding binding VERB VBG VerbForm=Ger _ _ _ _ 33 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10920 # text = Interleukin-5 (IL-5) is produced by T lymphocytes and known to support B cell growth and eosinophilic differentiation of the progenitor cells. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 5 5 NUM CD NumType=Card _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 produced produce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 support support NOUN NN Number=Sing _ _ _ _ 18 B b PROPN NNP Number=Sing _ _ _ _ 19 cell cell PROPN NNP Number=Sing _ _ _ _ 20 growth growth PROPN NNP Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 eosinophilic eosinophilic ADJ JJ Degree=Pos _ _ _ _ 23 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 progenitor progenitor ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 10921 # text = Using ATL-16T cells which express IL-5 mRNA, we have identified a region, within the human IL-5 gene promoter, that regulates IL-5 gene transcription. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 ATL Atl ADV RB _ _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 16T 16t ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 5 5 NUM CD NumType=Card _ _ _ _ 11 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 within within ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 5 5 NUM CD NumType=Card _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 29 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 5 5 NUM CD NumType=Card _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 10922 # text = This cis-acting sequence contains the core binding motif, (A/T)GATA(A/G), for GATA-binding family proteins and thus suggests the involvement of these family members. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 acting acting VERB VBG VerbForm=Ger _ _ _ _ 5 sequence sequence NOUN NN Number=Sing _ _ _ _ 6 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 core core NOUN NN Number=Sing _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 A/T Aetween PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 A/G A/G PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 binding binding VERB VBG VerbForm=Ger _ _ _ _ 24 family family NOUN NN Number=Sing _ _ _ _ 25 proteins protein NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 thus thus ADV RB _ _ _ _ _ 28 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 involvement involvement NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 33 family family NOUN NN Number=Sing _ _ _ _ 34 members member NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 10923 # text = In this report, we describe the cloning of human GATA-4 (hGATA-4) and show that hGATA-4 selectively interacts with the -70 GATA site within the IL-5 proximal promoter region. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 describe describe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 cloning cloning NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 GATA GATA NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 4 4 NUM CD NumType=Card _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 hGATA hGATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 hGATA hGATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - SYM SYM _ _ _ _ SpaceAfter=No 24 4 4 NUM CD NumType=Card _ _ _ _ 25 selectively selectively ADV RB _ _ _ _ _ 26 interacts interact NOUN NNS Number=Plur _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 - - SYM SYM _ _ _ _ SpaceAfter=No 30 70 70 NUM CD NumType=Card _ _ _ _ 31 GATA GATa NOUN NN Number=Sing _ _ _ _ 32 site site NOUN NN Number=Sing _ _ _ _ 33 within within ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT , _ _ _ _ SpaceAfter=No 37 5 5 NUM CD NumType=Card _ _ _ _ 38 proximal proximal NOUN NN Number=Sing _ _ _ _ 39 promoter promoter NOUN NN Number=Sing _ _ _ _ 40 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 10924 # text = By promoter deletion and mutation analyses, we established this region as a positive regulatory element. 1 By by ADP IN _ _ _ _ _ 2 promoter promoter NOUN NN Number=Sing _ _ _ _ 3 deletion deletion NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 mutation mutation NOUN NN Number=Sing _ _ _ _ 6 analyses analysis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 9 established establish VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 region region NOUN NN Number=Sing _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 positive positive ADJ JJ Degree=Pos _ _ _ _ 15 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 16 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 10925 # text = Cotransfection experiments revealed that both hGATA-4 and PMA/A23187 stimulation are necessary for the IL-5 promoter activation. 1 Cotransfection Cotransfection NOUN NN Number=Sing _ _ _ _ 2 experiments experiment NOUN NNS Number=Plur _ _ _ _ 3 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 both both DET DT _ _ _ _ _ 6 hGATA hGATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 4 4 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 A23187 A23187 NUM CD NumType=Card _ _ _ _ 13 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 5 5 NUM CD NumType=Card _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 10926 # text = The requirement of another regulatory element called CLE0, which lies downstream of the -70 GATA site, was also demonstrated. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 requirement requirement NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 another another DET DT _ _ _ _ _ 5 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 6 element element NOUN NN Number=Sing _ _ _ _ 7 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 CLE0 CLE0 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 which which PRON WDT PronType=Rel _ _ _ _ 11 lies lie VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 downstream downstream NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 -70 -70 NUM CD NumType=Card _ _ _ _ 16 GATA GATa NOUN NN Number=Sing _ _ _ _ 17 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 also also ADV RB _ _ _ _ _ 21 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10927 # text = ATL-16T cells express mRNA of three GATA-binding proteins, hGATA-2, hGATA-3 and hGATA-4, and each of them has a potential to bind to the consensus (A/T)GATA(G/ A) motif. 1 ATL Atl ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 16T 16t ADJ JJS Degree=Sup _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 express express ADJ JJ Degree=Pos _ _ _ _ 6 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 three three NUM CD NumType=Card _ _ _ _ 9 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 hGATA hGATA NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 hGATA hGATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 3 3 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 hGATA hGATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 each each DET DT _ _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ _ 30 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 potential potential NOUN NN Number=Sing _ _ _ _ 33 to to PART TO _ _ _ _ _ 34 bind bind VERB VB VerbForm=Inf _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 consensus consensus NOUN NN Number=Sing _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 A/T A/T PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 GATA GATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 G/ G/ X ADD _ _ _ _ _ 44 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ _ 46 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 10928 # text = However, using ATL-16T nuclear extract, we demonstrated that GATA-4 is the only GATA-binding protein that forms specific DNA-protein complex with the -70 GATA site. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 using use VERB VBG VerbForm=Ger _ _ _ _ 4 ATL ATL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 16T 16T PROPN NNP Number=Sing _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 extract extract NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - SYM SYM _ _ _ _ SpaceAfter=No 15 4 4 NUM CD NumType=Card _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 only only ADJ JJ Degree=Pos _ _ _ _ 19 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 binding binding VERB VBG VerbForm=Ger _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 that that PRON WDT PronType=Rel _ _ _ _ 24 forms form VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 specific specific ADJ JJ Degree=Pos _ _ _ _ 26 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 protein protein NOUN NN Number=Sing _ _ _ _ 29 complex complex NOUN NN Number=Sing _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 - - SYM SYM _ _ _ _ SpaceAfter=No 33 70 70 NUM CD NumType=Card _ _ _ _ 34 GATA GATa NOUN NN Number=Sing _ _ _ _ 35 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 10929 # text = The electrophoretic mobility shift assay with extracts of COS cells expressing GATA-binding proteins showed that GATA-4 has the highest binding affinity to the -70 GATA site among the three GATA-binding proteins. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 3 mobility mobility NOUN NN Number=Sing _ _ _ _ 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assay assay NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 extracts extract NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 COS Cos NOUN NN Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 12 GATA GATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 binding binding VERB VBG VerbForm=Ger _ _ _ _ 15 proteins protein NOUN NNS Number=Plur _ _ _ _ 16 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - SYM SYM _ _ _ _ SpaceAfter=No 20 4 4 NUM CD NumType=Card _ _ _ _ 21 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 highest highest ADJ JJS Degree=Sup _ _ _ _ 24 binding binding NOUN NN Number=Sing _ _ _ _ 25 affinity affinity NOUN NN Number=Sing _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 - - SYM SYM _ _ _ _ SpaceAfter=No 29 70 70 NUM CD NumType=Card _ _ _ _ 30 GATA GATa NOUN NN Number=Sing _ _ _ _ 31 site site NOUN NN Number=Sing _ _ _ _ 32 among among ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 three three NUM CD NumType=Card _ _ _ _ 35 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 binding binding NOUN NN Number=Sing _ _ _ _ 38 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 10930 # text = When the transactivation ability was compared among the three, GATA-4 showed the highest activity. 1 When when ADV WRB PronType=Int _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 4 ability ability NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 compared compare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 among among ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 three three NUM CD NumType=Card _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 4 4 NUM CD NumType=Card _ _ _ _ 14 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 highest highest ADJ JJS Degree=Sup _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 10931 # text = These results demonstrate the selective role of GATA-4 in the transcriptional regulation of the IL-5 gene in a circumstance where multiple members of the GATA-binding proteins are expressed. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 selective selective ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 4 4 NUM CD NumType=Card _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 14 regulation regulation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 5 5 NUM CD NumType=Card _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 circumstance circumstance NOUN NN Number=Sing _ _ _ _ 24 where where ADV WRB PronType=Rel _ _ _ _ 25 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 26 members member NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 binding binding VERB VBG VerbForm=Ger _ _ _ _ 32 proteins protein NOUN NNS Number=Plur _ _ _ _ 33 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 expressed expressed VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10932 # text = Document 0030012376 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012376 0030012376 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10933 # text = Transcriptional and posttranscriptional regulation of erythroid gene expression in anthracycline-induced differentiation of human erythroleukemic cells. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 posttranscriptional posttranscriptional ADJ JJ Degree=Pos _ _ _ _ 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 anthracycline anthracycline NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 erythroleukemic erythroleukemic ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10934 # text = Aclacinomycin (ACLA) and doxorubicin (DOX) were used at subtoxic concentrations to induce erythroid differentiation in the human leukemic cell line K562. 1 Aclacinomycin Aclacinomycin PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 ACLA ACLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 doxorubicin doxorubicin NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 DOX DOX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 at at ADP IN _ _ _ _ _ 13 subtoxic subtoxic ADJ JJ Degree=Pos _ _ _ _ 14 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 induce induce VERB VB VerbForm=Inf _ _ _ _ 17 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 18 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 line line NOUN NN Number=Sing _ _ _ _ 25 K562 k562 NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 10935 # text = Cell hemoglobinization was accompanied by the increased expression of genes encoding gamma-globin and porphobilinogen deaminase (PBGD), an enzyme of heme synthesis. 1 Cell cell NOUN NN Number=Sing _ _ _ _ 2 hemoglobinization hemoglobinization NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ _ 11 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 12 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 globin globin NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 porphobilinogen porphobilinogen NOUN NN Number=Sing _ _ _ _ 17 deaminase deaminase NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 PBGD pBGd NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 enzyme enzyme NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 heme heme ADJ JJ Degree=Pos _ _ _ _ 26 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 10936 # text = By using run-on assays, ACLA was shown to induce an enhancement of the transcription of erythroid genes, including gamma-globin, PBGD, erythropoietin receptor, and GATA-1 transcription factor. 1 By by SCONJ IN _ _ _ _ _ 2 using use VERB VBG VerbForm=Ger _ _ _ _ 3 run run NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 on on ADP IN _ _ _ _ _ 6 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 ACLA ACLA PROPN NNP Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 induce induce VERB VB VerbForm=Inf _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 including include VERB VBG VerbForm=Ger _ _ _ _ 23 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 globin globin NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 PBGD pBGd NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 erythropoietin erythropoietin NOUN NN Number=Sing _ _ _ _ 30 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 GATA GATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ _ 36 transcription transcription NOUN NN Number=Sing _ _ _ _ 37 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 10937 # text = In contrast, in DOX-treated cells, the transcription rate of these genes was unchanged in comparison with control cells. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 DOX DOX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 rate rate NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 unchanged unchange ADJ JJ Degree=Pos _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 comparison comparison NOUN NN Number=Sing _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 control control NOUN NN Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 10938 # text = In addition, inhibition of mRNA synthesis with actinomycin D indicated that DOX induced an increased stability of PBGD and GATA-1 mRNAs, whereas ACLA did not affect the half-lives of these mRNAs. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 7 synthesis synthesis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 actinomycin actinomycin PROPN NNP Number=Sing _ _ _ _ 10 D D PROPN NNP Number=Sing _ _ _ _ 11 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 DOX DOX PROPN NNP Number=Sing _ _ _ _ 14 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 stability stability NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 PBGD PBGD PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 mRNAs mRNA NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 whereas whereas SCONJ IN _ _ _ _ _ 27 ACLA ACLA PROPN NNP Number=Sing _ _ _ _ 28 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 not not PART RB _ _ _ _ _ 30 affect affect VERB VB VerbForm=Inf _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 half half NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 lives life NOUN NNS Number=Plur _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 37 mRNAs mRNA NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 10939 # text = Because the increase in erythroid mRNA steady-state level in anthracycline-treated cells was inhibited by cycloheximide, this suggests that transcriptional activation in ACLA-treated cells and mRNA stabilization in DOX-treated cells were dependent on de novo protein synthesis. 1 Because because SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 increase increase NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 erythroid erythroid PROPN NNP Number=Sing _ _ _ _ 6 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 7 steady steady ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 state state NOUN NN Number=Sing _ _ _ _ 10 level level NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 anthracycline anthracycline NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 22 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 24 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 ACLA ACLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 treated treated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 33 stabilization stabilization NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 DOX DOX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ _ 39 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 40 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 41 on on ADP IN _ _ _ _ _ 42 de de X FW Foreign=Yes _ _ _ _ 43 novo novo ADJ JJ Degree=Pos _ _ _ _ 44 protein protein NOUN NN Number=Sing _ _ _ _ 45 synthesis synthesis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 10940 # text = Finally, GATA-1 protein level was shown to be increased in ACLA-treated but not in DOX-treated cells. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 level level NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 ACLA ACLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 not not PART RB _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 DOX DOX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 10941 # text = These two anthracyclines, although closely related in their structures, appeared to act as differentiation inducers by distinct mechanisms. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 anthracyclines anthracycline NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 although although SCONJ IN _ _ _ _ _ 6 closely closely ADV RB _ _ _ _ _ 7 related related ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 10 structures structure NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 act act VERB VB VerbForm=Inf _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 17 inducers inducer NOUN NNS Number=Plur _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 20 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 10942 # text = Indeed, erythroid gene expression was demonstrated to be regulated transcriptionally by ACLA and mainly posttranscriptionally by DOX. 1 Indeed indeed ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 transcriptionally transcriptionally ADV RB _ _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 ACLA ACLA PROPN NNP Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 mainly mainly ADV RB _ _ _ _ _ 16 posttranscriptionally posttranscriptionally ADV RB _ _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 DOX DOX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10943 # text = Document 0030012381 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012381 0030012381 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10944 # text = Expression of erythroid-specific genes in megakaryoblastic disorders. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 specific specific ADJ JJ Degree=Pos _ _ _ _ 6 genes gene NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 megakaryoblastic megakaryoblastic ADJ JJ Degree=Pos _ _ _ _ 9 disorders disorder NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10945 # text = Currently available data indicate that erythroid and megakaryocytic differentiation pathways are closely related to each other, and there may exist progenitor cells common to those two lineages may exist. 1 Currently currently ADV RB _ _ _ _ _ 2 available available ADJ JJ Degree=Pos _ _ _ _ 3 data data NOUN NN Number=Sing _ _ _ _ 4 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 9 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 10 pathways pathway NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 closely closely ADV RB _ _ _ _ _ 13 related related ADJ JJ Degree=Pos _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 each each DET DT _ _ _ _ _ 16 other other ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 there there PRON EX _ _ _ _ _ 20 may may AUX MD VerbForm=Fin _ _ _ _ 21 exist exist VERB VB VerbForm=Inf _ _ _ _ 22 progenitor progenitor ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 common common ADJ JJ Degree=Pos _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 those those DET DT Number=Plur|PronType=Dem _ _ _ _ 27 two two NUM CD NumType=Card _ _ _ _ 28 lineages lineage NOUN NNS Number=Plur _ _ _ _ 29 may may AUX MD VerbForm=Fin _ _ _ _ 30 exist exist VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 10946 # text = Acute megakaryoblastic leukemia (AML-M7) and transient myeloproliferative disorder in Down's syndrome (TMD) are characterized by rapid growth of abnormal blast cells which express megakaryocytic markers. 1 Acute Acute ADV RB _ _ _ _ _ 2 megakaryoblastic megakaryoblastic ADJ JJ Degree=Pos _ _ _ _ 3 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 AML aml NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 M7 M7 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 transient transient ADJ JJ Degree=Pos _ _ _ _ 11 myeloproliferative myeloproliferative ADJ JJ Degree=Pos _ _ _ _ 12 disorder disorder NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 Down Down PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 's 's PART POS _ _ _ _ _ 16 syndrome syndrome NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 TMD tMd NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 characterized characterize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 24 growth growth NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 abnormal abnormal ADJ JJ Degree=Pos _ _ _ _ 27 blast blast ADJ JJ Degree=Pos _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 which which PRON WDT PronType=Rel _ _ _ _ 30 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 32 markers marker NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 10947 # text = These blast cells express lineage-specific transcription factors such as GATA-1 common to these lineages and frequently express erythroid-specific mRNAs such as gamma-globin and erythroid delta-aminolevulinate synthase (ALAS-E), indicating that most of the blasts in M7 and TMD cases have erythroid and megakaryocytic phenotypes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 blast blast ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factors factor NOUN NNS Number=Plur _ _ _ _ 10 such such ADJ JJ Degree=Pos _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 common common NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 18 lineages lineage NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 frequently frequently ADV RB _ _ _ _ _ 21 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 mRNAs mRNA NOUN NNS Number=Plur _ _ _ _ 26 such such ADJ JJ Degree=Pos _ _ _ _ 27 as as ADP IN _ _ _ _ _ 28 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 globin globin NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 33 delta- delta- PUNCT , _ _ _ _ SpaceAfter=No 34 aminolevulinate aminolevulinate ADJ JJ Degree=Pos _ _ _ _ 35 synthase synthase NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 ALAS Alas NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 E e NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 43 that that SCONJ IN _ _ _ _ _ 44 most most ADJ JJS Degree=Sup _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 blasts blast NOUN NNS Number=Plur _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 M7 M7 NOUN NN Number=Sing _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 TMD tMd NOUN NN Number=Sing _ _ _ _ 52 cases cas NOUN NNS Number=Plur _ _ _ _ 53 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 54 erythroid erythroid VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 55 and and CCONJ CC _ _ _ _ _ 56 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 57 phenotypes phenotype NOUN NNS Number=Plur _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 10948 # text = These results suggest that blasts in M7 and TMD may correspond to progenitors of both erythroid and megakaryocytic lineages. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 blasts blast NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 M7 M7 NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 TMD tMd NOUN NN Number=Sing _ _ _ _ 10 may may AUX MD VerbForm=Fin _ _ _ _ 11 correspond correspond VERB VB VerbForm=Inf _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 progenitors progenitor NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 both both CCONJ CC _ _ _ _ _ 16 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 19 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10949 # text = Document 0030012383 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012383 0030012383 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10950 # text = Replication of human immunodeficiency virus-1 in primary human T cells is dependent on the autocrine secretion of tumor necrosis factor through the control of nuclear factor-kappa B activation. 1 Replication Replication NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 -1 -1 NUM CD NumType=Card _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 primary primary ADJ JJ Degree=Pos _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 autocrine autocrine NOUN NN Number=Sing _ _ _ _ 17 secretion secretion NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 tumor tumor NOUN NN Number=Sing _ _ _ _ 20 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 through through ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 control control NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ _ 31 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10951 # text = Tumor necrosis factor (TNF)-alpha controls T-cell activation and is a major inducer of human immunodeficiency virus (HIV)-1 replication in chronically infected cells. 1 Tumor tumor ADP IN _ _ _ _ _ 2 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 7 - - PUNCT : _ _ _ _ SpaceAfter=No 8 alpha alpha NOUN NN Number=Sing _ _ _ _ 9 controls control NOUN NNS Number=Plur _ _ _ _ 10 T- T- PUNCT : _ _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 major major ADJ JJ Degree=Pos _ _ _ _ 17 inducer inducer NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 21 virus virus NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 - - PUNCT : _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 replication replication NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 chronically chronically ADV RB _ _ _ _ _ 30 infected infect ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 10952 # text = Therefore, we have investigated its role in primary cultures of HIV-infected human T lymphocytes by using neutralizing anti-TNF-alpha antibodies or TNF-alpha. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 7 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 primary primary ADJ JJ Degree=Pos _ _ _ _ 11 cultures culture NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 HIV- HIV- SYM NFP _ _ _ _ SpaceAfter=No 14 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 18 by by SCONJ IN _ _ _ _ _ 19 using use VERB VBG VerbForm=Ger _ _ _ _ 20 neutralizing neutralize VERB VBG VerbForm=Ger _ _ _ _ 21 anti-TNF anti-tnf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 alpha alpha NOUN NN Number=Sing _ _ _ _ 24 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 10953 # text = Primary resting 1 Primary primary X GW _ _ _ _ _ 2 resting resting X ADD _ _ _ _ _ # sent_id = 10954 # text = T lymphocytes produced TNF-alpha and supported HIV replication after T-cell receptor activation. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 3 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 supported support VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 HIV Hiv NOUN NN Number=Sing _ _ _ _ 10 replication replication NOUN NN Number=Sing _ _ _ _ 11 after after ADP IN _ _ _ _ _ 12 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 10955 # text = Addition of neutralizing anti-TNF-alpha antibodies drastically reduced p24 antigen release and prevented CD4+ cell depletion associated with infection. 1 Addition Addition PROPN NNP Number=Sing _ _ _ _ 2 of of SCONJ IN _ _ _ _ _ 3 neutralizing neutralizing VERB VBG VerbForm=Ger _ _ _ _ 4 anti-TNF anti-tnf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 8 drastically drastically ADV RB _ _ _ _ _ 9 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 p24 p24 NUM CD NumType=Card _ _ _ _ 11 antigen antigen NUM CD NumType=Card _ _ _ _ 12 release release NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 + + SYM SYM _ _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 depletion depletion NOUN NN Number=Sing _ _ _ _ 19 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 10956 # text = Anti-TNF-alpha also prevented nuclear factor-kappa B (NF-kappa B) activation, and a good correlation between this inhibition and inhibition of HIV replication was observed. 1 Anti-TNF Anti-tnf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 alpha alpha NOUN NN Number=Sing _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 good good ADJ JJ Degree=Pos _ _ _ _ 22 correlation correlation NOUN NN Number=Sing _ _ _ _ 23 between between ADP IN _ _ _ _ _ 24 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 25 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 HIV Hiv NOUN NN Number=Sing _ _ _ _ 30 replication replication NOUN NN Number=Sing _ _ _ _ 31 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 32 observed observe ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 10957 # text = Moreover, supplementing the cultures with high doses of IL-2 reverted anti-TNF-alpha inhibition of cell proliferation but did not affect the inhibition of HIV p24 antigen release or NF-kappa B activation in the same cultures. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 supplementing supplement VERB VBG VerbForm=Ger _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 cultures culture NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 high high ADJ JJ Degree=Pos _ _ _ _ 8 doses dos NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 reverted revert VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 anti-TNF anti-tnf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 21 but but CCONJ CC _ _ _ _ _ 22 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 not not PART RB _ _ _ _ _ 24 affect affect VERB VB VerbForm=Inf _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 HIV HIV PROPN NNP Number=Sing _ _ _ _ 29 p24 p24 NUM CD NumType=Card _ _ _ _ 30 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 31 release release NOUN NN Number=Sing _ _ _ _ 32 or or CCONJ CC _ _ _ _ _ 33 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 kappa kappa NOUN NN Number=Sing _ _ _ _ 36 B b NOUN NN Number=Sing _ _ _ _ 37 activation activation NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 same same ADJ JJ Degree=Pos _ _ _ _ 41 cultures culture NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 10958 # text = Moreover, anti-TNF-alpha inhibited HIV-1 long terminal repeat (LTR)-driven transcription of a reporter gene in primary T cells in response to activation, either in the presence or the absence of HIV-1 Tat. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 anti-TNF anti-tnf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 alpha alpha ADV RB _ _ _ _ _ 6 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 long long ADJ JJ Degree=Pos _ _ _ _ 11 terminal terminal NOUN NN Number=Sing _ _ _ _ 12 repeat repeat NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 reporter reporter NOUN NN Number=Sing _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 primary primary ADJ JJ Degree=Pos _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 response response NOUN NN Number=Sing _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 either either CCONJ CC _ _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 presence presence NOUN NN Number=Sing _ _ _ _ 36 or or CCONJ CC _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 absence absence NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 1 1 NUM CD NumType=Card _ _ _ _ 43 Tat Tat NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 10959 # text = Our results support an important role for autocrine TNF-alpha secretion in controlling HIV replication in primary T cells because of its ability to maintain NF-kappa B elevated in the nucleus of T cells. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 support support VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 important important ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 autocrine autocrine NOUN NN Number=Sing _ _ _ _ 9 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 secretion secretion NOUN NN Number=Sing _ _ _ _ 13 in in SCONJ IN _ _ _ _ _ 14 controlling controlle VERB VBG VerbForm=Ger _ _ _ _ 15 HIV HIV PROPN NNP Number=Sing _ _ _ _ 16 replication replication NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 primary primary ADJ JJ Degree=Pos _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 because because ADP IN _ _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 ability ability NOUN NN Number=Sing _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 maintain maintain VERB VB VerbForm=Inf _ _ _ _ 27 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ _ 31 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 T t PROPN NNP Number=Sing _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10960 # text = Document 0030012384 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012384 0030012384 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10961 # text = A novel lipopolysaccharide-induced transcription factor regulating tumor necrosis factor alpha gene expression: molecular cloning, sequencing, characterization, and chromosomal assignment. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 novel novel NOUN NN Number=Sing _ _ _ _ 3 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 9 tumor tumor NOUN NN Number=Sing _ _ _ _ 10 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 alpha alpha ADP IN _ _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 : : PUNCT : _ _ _ _ _ 16 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 17 cloning cloning NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 sequencing sequencing NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 characterization characterization NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 chromosomal chromosomal ADJ JJ Degree=Pos _ _ _ _ 25 assignment assignment NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10962 # text = Lipopolysaccharide (LPS) is a potent stimulator of monocytes and macrophages, causing secretion of tumor necrosis factor alpha (TNF-alpha) and other inflammatory mediators. 1 Lipopolysaccharide Lipopolysaccharide PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 potent potent NOUN NN Number=Sing _ _ _ _ 8 stimulator stimulator NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 causing cause VERB VBG VerbForm=Ger _ _ _ _ 15 secretion secretion NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 tumor tumor NOUN NN Number=Sing _ _ _ _ 18 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 alpha alpha NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 other other ADJ JJ Degree=Pos _ _ _ _ 28 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 29 mediators mediator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 10963 # text = Given the deleterious effects to the host of TNF-alpha, it has been postulated that TNF-alpha gene expression must be tightly regulated. 1 Given give VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 deleterious deleterious ADJ JJ Degree=Pos _ _ _ _ 4 effects effect NOUN NNS Number=Plur _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 host host NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 alpha alpha INTJ UH _ _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 14 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 16 postulated postulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 18 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 alpha alpha NOUN NN Number=Sing _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 must must AUX MD VerbForm=Fin _ _ _ _ 24 be be AUX VB VerbForm=Inf _ _ _ _ 25 tightly tightly ADV RB _ _ _ _ _ 26 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 10964 # text = The nature of the nuclear factor(s) that control TNF-alpha gene transcription in humans remains obscure, although NF-kappaB has been suggested. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 nature nature NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 s s X AFX _ _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 11 control control NOUN NN Number=Sing _ _ _ _ 12 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 alpha alpha NOUN NN Number=Sing _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 humans human NOUN NNS Number=Plur _ _ _ _ 19 remains remains VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 obscure obscure ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 although although SCONJ IN _ _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 26 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 28 suggested suggest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 10965 # text = Our previous studies pertaining to macrophage response to LPS identified a novel DNA-binding domain located from -550 to -487 in the human TNF-alpha promoter that contains transcriptional activity, but lacks any known NF-kappaB-binding sites. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 previous previous ADJ JJ Degree=Pos _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 pertaining pertai VERB VBG VerbForm=Ger _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 macrophage macrophage VERB VB VerbForm=Inf _ _ _ _ 7 response response NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 LPS LPS PROPN NNP Number=Sing _ _ _ _ 10 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 novel novel NOUN NN Number=Sing _ _ _ _ 13 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 binding bind VERB VBG VerbForm=Ger _ _ _ _ 16 domain domain NOUN NN Number=Sing _ _ _ _ 17 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 550 550 NUM CD NumType=Card _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 - - SYM SYM _ _ _ _ SpaceAfter=No 23 487 487 NUM CD NumType=Card _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 alpha alpha NOUN NN Number=Sing _ _ _ _ 30 promoter promoter NOUN NN Number=Sing _ _ _ _ 31 that that PRON WDT PronType=Rel _ _ _ _ 32 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 34 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 but but CCONJ CC _ _ _ _ _ 37 lacks lack VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 any any DET DT _ _ _ _ _ 39 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 kappaB- kappab- NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 binding binding VERB VBG VerbForm=Ger _ _ _ _ 44 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 10966 # text = We have used this DNA fragment to isolate and purify a 60-kDa protein binding to this fragment and obtained its amino-terminal sequence, which was used to design degenerate probes to screen a cDNA library from THP-1 cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 DNA dna NOUN NN Number=Sing _ _ _ _ 6 fragment fragment NOUN NN Number=Sing _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 isolate isolate VERB VB VerbForm=Inf _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 purify purify VERB VB VerbForm=Inf _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 60 60 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kDa kDa NOUN NN Number=Sing _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 19 fragment fragment NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 obtained obtain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 23 amino amino NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 terminal terminal NOUN NN Number=Sing _ _ _ _ 26 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 which which PRON WDT PronType=Rel _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 design design VERB VB VerbForm=Inf _ _ _ _ 33 degenerate degenerate ADJ JJ Degree=Pos _ _ _ _ 34 probes probe NOUN NNS Number=Plur _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 screen screen NOUN NN Number=Sing _ _ _ _ 37 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 39 library library NOUN NN Number=Sing _ _ _ _ 40 from from ADP IN _ _ _ _ _ 41 THP THP NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT , _ _ _ _ SpaceAfter=No 43 1 1 NUM CD NumType=Card _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 10967 # text = A novel cDNA clone (1.8 kb) was isolated and fully sequenced. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 novel novel NOUN NN Number=Sing _ _ _ _ 3 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 4 clone clone NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 1.8 1.8 NUM CD NumType=Card _ _ _ _ 7 kb kb NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 isolated isolate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 fully fully ADV RB _ _ _ _ _ 13 sequenced sequence VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 10968 # text = Characterization of this cDNA clone revealed that its induction was dependent on LPS activation of THP-1 cells; hence, the name LPS-induced TNF-alpha factor (LITAF). 1 Characterization Characterization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 5 clone clone PRON NN Number=Sing _ _ _ _ 6 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 THP THP NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 ; ; PUNCT , _ _ _ _ _ 21 hence hence ADV RB _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 name name NOUN NN Number=Sing _ _ _ _ 25 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 alpha alpha NOUN NN Number=Sing _ _ _ _ 31 factor factor NOUN NN Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 LITAF LITAF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 10969 # text = Inhibition of LITAF mRNA expression in THP-1 cells resulted in a reduction of TNF-alpha transcripts. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 LITAF LITAF PROPN NNP Number=Sing _ _ _ _ 4 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 THP THP NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 reduction reduction NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 alpha alpha NOUN NN Number=Sing _ _ _ _ 19 transcripts transcript NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 10970 # text = In addition, high level of expression of LITAF mRNA was observed predominantly in the placenta, peripheral blood leukocytes, lymph nodes, and the spleen. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 high high ADJ JJ Degree=Pos _ _ _ _ 5 level level NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 LITAF LITAF PROPN NNP Number=Sing _ _ _ _ 10 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 predominantly predominantly ADV RB _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 placenta placenta NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 19 blood blood NOUN NN Number=Sing _ _ _ _ 20 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 lymph lymph NOUN NN Number=Sing _ _ _ _ 23 nodes node NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 spleen spleen NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 10971 # text = Finally, chromosomal localization using fluorescence in situ hybridization revealed that LITAF mapped to chromosome 16p12-16p13.3. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 chromosomal chromosomal ADJ JJ Degree=Pos _ _ _ _ 4 localization localization NOUN NN Number=Sing _ _ _ _ 5 using use VERB VBG VerbForm=Ger _ _ _ _ 6 fluorescence fluorescence NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 situ situ NOUN NN Number=Sing _ _ _ _ 9 hybridization hybridization NOUN NN Number=Sing _ _ _ _ 10 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 LITAF LITAF PROPN NNP Number=Sing _ _ _ _ 13 mapped map VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 chromosome chromosome VERB VB VerbForm=Inf _ _ _ _ 16 16p12-16p13.3 16p12-16p13.3 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 10972 # text = Together, these findings suggest that LITAF plays an important role in the activation of the human TNF-alpha gene and proposes a new mechanism to control TNF-alpha gene expression. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 findings finding NOUN NNS Number=Plur _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 LITAF LITAF PROPN NNP Number=Sing _ _ _ _ 8 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 important important ADJ JJ Degree=Pos _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 alpha alpha NOUN NN Number=Sing _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 proposes propose VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 new new ADJ JJ Degree=Pos _ _ _ _ 26 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 control control VERB VB VerbForm=Inf _ _ _ _ 29 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 alpha alpha NOUN NN Number=Sing _ _ _ _ 32 gene gene NOUN NN Number=Sing _ _ _ _ 33 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10973 # text = Document 0030012388 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012388 0030012388 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10974 # text = BCL-6, a POZ/zinc-finger protein, is a sequence-specific transcriptional repressor. 1 BCL Bcl INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 POZ Poz NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 zinc zinc NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 finger finger NOUN NN Number=Sing _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 19 repressor repressor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10975 # text = Approximately 40% of diffuse large cell lymphoma are associated with chromosomal translocations that deregulate the expression of the BCL6 gene by juxtaposing heterologous promoters to the BCL-6 coding domain. 1 Approximately approximately ADV RB _ _ _ _ _ 2 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 % % SYM NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 diffuse diffuse ADJ JJ Degree=Pos _ _ _ _ 6 large large ADJ JJ Degree=Pos _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 chromosomal chromosomal NOUN NN Number=Sing _ _ _ _ 13 translocations translocation NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 deregulate deregulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 BCL6 Bcl6 PROPN NNP Number=Sing _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 by by SCONJ IN _ _ _ _ _ 23 juxtaposing juxtapose VERB VBG VerbForm=Ger _ _ _ _ 24 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 25 promoters promoter NOUN NNS Number=Plur _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 BCL BCL NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 6 6 NUM CD NumType=Card _ _ _ _ 31 coding coding NOUN NN Number=Sing _ _ _ _ 32 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 10976 # text = The BCL6 gene encodes a 95-kDa protein containing six C-terminal zinc-finger motifs and an N-terminal POZ domain, suggesting that it may function as a transcription factor. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 BCL6 Bcl6 PROPN NNP Number=Sing _ _ _ _ 3 gene gene NOUN NN Number=Sing _ _ _ _ 4 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 95 95 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kDa kDa NOUN NN Number=Sing _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 containing contain VERB VBG VerbForm=Ger _ _ _ _ 11 six six NUM CD NumType=Card _ _ _ _ 12 C- C- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 terminal terminal NOUN NN Number=Sing _ _ _ _ 14 zinc zinc NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 finger finger NOUN NN Number=Sing _ _ _ _ 17 motifs motif NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 N- n- NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 terminal terminal NOUN NN Number=Sing _ _ _ _ 22 POZ Poz NOUN NN Number=Sing _ _ _ _ 23 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 28 may may AUX MD VerbForm=Fin _ _ _ _ 29 function function VERB VB VerbForm=Inf _ _ _ _ 30 as as ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 transcription transcription NOUN NN Number=Sing _ _ _ _ 33 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 10977 # text = By using a DNA sequence selected for its ability to bind recombinant BCL-6 in vitro, we show here that BCL-6 is present in DNA-binding complexes in nuclear extracts from various B-cell lines. 1 By by SCONJ IN _ _ _ _ _ 2 using use VERB VBG VerbForm=Ger _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ _ 5 sequence sequence NOUN NN Number=Sing _ _ _ _ 6 selected select VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 9 ability ability NOUN NN Number=Sing _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 bind bind VERB VB VerbForm=Inf _ _ _ _ 12 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 13 BCL BCL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - SYM SYM _ _ _ _ SpaceAfter=No 15 6 6 NUM CD NumType=Card _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 20 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 here here ADV RB PronType=Dem _ _ _ _ 22 that that SCONJ IN _ _ _ _ _ 23 BCL BCL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - SYM SYM _ _ _ _ SpaceAfter=No 25 6 6 NUM CD NumType=Card _ _ _ _ 26 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 present present ADJ JJ Degree=Pos _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 binding binding VERB VBG VerbForm=Ger _ _ _ _ 32 complexes complex NOUN NNS Number=Plur _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 35 extracts extract NOUN NNS Number=Plur _ _ _ _ 36 from from ADP IN _ _ _ _ _ 37 various various ADJ JJ Degree=Pos _ _ _ _ 38 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 10978 # text = In transient transfectin experiments, BCL6 can repress transcription from promoters linked to its DNA target sequence and this activity is dependent upon specific DNA-binding and the presence of an intact N-terminal half of the protein. 1 In in ADP IN _ _ _ _ _ 2 transient transient ADJ JJ Degree=Pos _ _ _ _ 3 transfectin transfectin NOUN NN Number=Sing _ _ _ _ 4 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 BCL6 Bcl6 PROPN NNP Number=Sing _ _ _ _ 7 can can AUX MD VerbForm=Fin _ _ _ _ 8 repress repress VERB VB VerbForm=Inf _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 promoters promoter NOUN NNS Number=Plur _ _ _ _ 12 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 DNA dna NOUN NN Number=Sing _ _ _ _ 16 target target NOUN NN Number=Sing _ _ _ _ 17 sequence sequence NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 23 upon upon ADP IN _ _ _ _ _ 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 binding binding NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 presence presence NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 intact intact NOUN NN Number=Sing _ _ _ _ 34 N- N- PUNCT , _ _ _ _ SpaceAfter=No 35 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 36 half half NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 10979 # text = We demonstrate that this part of the BCL6 molecule contains an autonomous transrepressor domain and that two noncontiguous regions, including the POZ motif, mediate maximum transrepressive activity. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 part part NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 BCL6 Bcl6 PROPN NNP Number=Sing _ _ _ _ 9 molecule molecule NOUN NN Number=Sing _ _ _ _ 10 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 autonomous autonomous ADJ JJ Degree=Pos _ _ _ _ 13 transrepressor transrepressor NOUN NN Number=Sing _ _ _ _ 14 domain domain NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 17 two two NUM CD NumType=Card _ _ _ _ 18 noncontiguous noncontiguous ADJ JJ Degree=Pos _ _ _ _ 19 regions region NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 including include VERB VBG VerbForm=Ger _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 POZ POZ NOUN NN Number=Sing _ _ _ _ 24 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 mediate mediate ADJ JJ Degree=Pos _ _ _ _ 27 maximum maximum ADJ JJ Degree=Pos _ _ _ _ 28 transrepressive transrepressive ADJ JJ Degree=Pos _ _ _ _ 29 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 10980 # text = These results indicate that the BCL-6 protein can function as a sequence-specific transcriptional repressor and have implications for the role of BCL6 in normal lymphoid development and lymphomagenesis. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 BCL Bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 6 6 NUM CD NumType=Card _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 can can AUX MD VerbForm=Fin _ _ _ _ 11 function function VERB VB VerbForm=Inf _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 repressor repressor NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 implications implication NOUN NNS Number=Plur _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 role role NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 BCL6 BCL6 NUM CD NumType=Card _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 normal normal ADJ JJ Degree=Pos _ _ _ _ 29 lymphoid lymphoid NOUN NN Number=Sing _ _ _ _ 30 development development NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 lymphomagenesis lymphomagenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10981 # text = Document 0030012390 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012390 0030012390 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10982 # text = Expression of c-fos and c-jun proteins and AP-1 binding activity during cell cycle progression of 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 fos fo NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 c- c- SYM NFP _ _ _ _ SpaceAfter=No 8 jun jun ADJ JJ Degree=Pos _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 binding binding VERB VBG VerbForm=Ger _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 during during ADP IN _ _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 cycle cycle NOUN NN Number=Sing _ _ _ _ 19 progression progression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ # sent_id = 10983 # text = HL60 cells and phytohemagglutinin-stimulated lymphocytes. 1 HL60 HL60 NUM CD NumType=Card _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 phytohemagglutinin phytohemagglutinin NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10984 # text = The protein products of the c-fos (p62c-fos) and c-jun (p39c-jun) genes are members of the AP-1 transcription factor family and are thought to play important roles in the regulation of gene expression during the cell cycle. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 products product NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 c- c- PUNCT : _ _ _ _ SpaceAfter=No 7 fos fo NOUN NNS Number=Plur _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 p62c p62c NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 c- c- SYM NFP _ _ _ _ SpaceAfter=No 15 jun jun NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 p39c p39c NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ _ 22 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 members member NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ _ 31 family family NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 play play VERB VB VerbForm=Inf _ _ _ _ 37 important important ADJ JJ Degree=Pos _ _ _ _ 38 roles role NOUN NNS Number=Plur _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 regulation regulation NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 gene gene NOUN NN Number=Sing _ _ _ _ 44 expression expression NOUN NN Number=Sing _ _ _ _ 45 during during ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 cell cell NOUN NN Number=Sing _ _ _ _ 48 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 10985 # text = Most studies on the expression of these proteins in relation to the cell cycle have been performed at the mRNA level, and therefore do not give direct information about the presence of the proteins during the cell cycle. 1 Most most ADJ JJS Degree=Sup _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 on on ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 proteins protein NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 relation relation NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 cycle cycle NOUN NN Number=Sing _ _ _ _ 15 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 17 performed perform VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 at at ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 21 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 therefore therefore ADV RB _ _ _ _ _ 25 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 not not PART RB _ _ _ _ _ 27 give give VERB VB VerbForm=Inf _ _ _ _ 28 direct direct ADJ JJ Degree=Pos _ _ _ _ 29 information information NOUN NN Number=Sing _ _ _ _ 30 about about ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 presence presence NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 proteins protein NOUN NNS Number=Plur _ _ _ _ 36 during during ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 10986 # text = We have used Western blotting to investigate the presence of these proteins during the cell cycles of two different cellular systems: a continuously growing myeloid leukemic cell line, HL60, and normal cells stimulated into cycle, phyto- hemagglutinin (PHA)-stimulated normal human peripheral blood lymphocytes (PBL). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 Western western ADJ JJ Degree=Pos _ _ _ _ 5 blotting blotting NOUN NN Number=Sing _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 presence presence NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 12 proteins protein NOUN NNS Number=Plur _ _ _ _ 13 during during ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 cycles cycle NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 two two NUM CD NumType=Card _ _ _ _ 19 different different ADJ JJ Degree=Pos _ _ _ _ 20 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 21 systems system NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 : : PUNCT : _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 continuously continuously NOUN NN Number=Sing _ _ _ _ 25 growing grow VERB VBG VerbForm=Ger _ _ _ _ 26 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 27 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 HL60 HL60 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 normal normal ADJ JJ Degree=Pos _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ _ 36 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 into into ADP IN _ _ _ _ _ 38 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 phyto phyto NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ _ 42 hemagglutinin hemagglutinin NOUN NN Number=Sing _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 PHA PHA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 48 normal normal ADJ JJ Degree=Pos _ _ _ _ 49 human human ADJ JJ Degree=Pos _ _ _ _ 50 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 51 blood blood NOUN NN Number=Sing _ _ _ _ 52 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 53 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 54 PBL PBL NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 10987 # text = The binding activity of transcription factor AP-1, which consists of dimers of Fos and Jun family proteins, was also studied using a gel shift assay. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 binding bind VERB VBG VerbForm=Ger _ _ _ _ 3 activity activity NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 consists consist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 dimers dimer NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 Fos Fos PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 Jun Jun PROPN NNP Number=Sing _ _ _ _ 19 family family NOUN NN Number=Sing _ _ _ _ 20 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 also also ADV RB _ _ _ _ _ 24 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 using use VERB VBG VerbForm=Ger _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 gel gel NOUN NN Number=Sing _ _ _ _ 28 shift shift NOUN NN Number=Sing _ _ _ _ 29 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 10988 # text = We found nuclear p62c-fos, p39c-jun, and AP-1 binding activity throughout the cell cycle both in HL60 cells and in PHA-stimulated PBL, and we postulate that these proteins are required throughout the cell cycle and not transiently in the G0 to G1 transition as previous mRNA studies have indicated. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 p62c p62c NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 p39c p39c NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 throughout throughout ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 cycle cycle NOUN NN Number=Sing _ _ _ _ 22 both both CCONJ CC _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 HL60 HL60 NUM CD NumType=Card _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 PHA PHA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 PBL pBl NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 35 postulate postulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 36 that that SCONJ IN _ _ _ _ _ 37 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 38 proteins protein NOUN NNS Number=Plur _ _ _ _ 39 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 40 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 41 throughout throughout ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 cell cell NOUN NN Number=Sing _ _ _ _ 44 cycle cycle NOUN NN Number=Sing _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 not not ADV RB _ _ _ _ _ 47 transiently transiently ADV RB _ _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 G0 G0 PROPN NNP Number=Sing _ _ _ _ 51 to to ADP IN _ _ _ _ _ 52 G1 G1 NUM CD NumType=Card _ _ _ _ 53 transition transition NOUN NN Number=Sing _ _ _ _ 54 as as ADP IN _ _ _ _ _ 55 previous previous ADJ JJ Degree=Pos _ _ _ _ 56 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 57 studies study NOUN NNS Number=Plur _ _ _ _ 58 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 59 indicated indicate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 10989 # text = We demonstrated an uncoupling of AP-1 binding activity from p62c-fos, and p39c-jun AP-1 activity was expressed more strongly in the G1- and G2/M-phase enriched samples than in the S-phase enriched samples of HL60 cells, while levels of nuclear p62c-fos and p39c-jun were constant. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 uncoupling uncoupling NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 p62c p62c NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 p39c p39c NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 jun jun NOUN NN Number=Sing _ _ _ _ 20 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 more more ADV RBR _ _ _ _ _ 27 strongly strongly ADV RB _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 G1 g1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 G2/ g2/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 M- M- PUNCT , _ _ _ _ SpaceAfter=No 35 phase phase NOUN NN Number=Sing _ _ _ _ 36 enriched enrich VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 samples sample NOUN NNS Number=Plur _ _ _ _ 38 than than ADP IN _ _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 S- s- NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 phase phase NOUN NN Number=Sing _ _ _ _ 43 enriched enrich VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 samples sample NOUN NNS Number=Plur _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 HL60 HL60 PROPN NNP Number=Sing _ _ _ _ 47 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 while while SCONJ IN _ _ _ _ _ 50 levels level NOUN NNS Number=Plur _ _ _ _ 51 of of ADP IN _ _ _ _ _ 52 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 53 p62c p62c NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 fos fo NOUN NNS Number=Plur _ _ _ _ 56 and and CCONJ CC _ _ _ _ _ 57 p39c p39c NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 59 jun jun NOUN NN Number=Sing _ _ _ _ 60 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 61 constant constant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 62 . . PUNCT . _ _ _ _ _ # sent_id = 10990 # text = Nuclei of unstimulated PBL from different donors expressed p62c-fos and p39c-jun, but AP-1 was not detected in the majority of samples. 1 Nuclei Nuclei NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 4 PBL pBl NOUN NN Number=Sing _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 different different ADJ JJ Degree=Pos _ _ _ _ 7 donors donor NOUN NNS Number=Plur _ _ _ _ 8 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 p62c p62c NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 fos fo NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 p39c p39c NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 but but CCONJ CC _ _ _ _ _ 18 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 majority majority NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 samples sample NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 10991 # text = Following PHA stimulation of PBL, the increase in AP-1 activity was delayed with respect to the augmentation of p39c-jun expression. 1 Following follow VERB VBG VerbForm=Ger _ _ _ _ 2 PHA PHa DET DT Definite=Ind|PronType=Art _ _ _ _ 3 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 PBL PBL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 increase increase NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 delayed delay VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 respect respect NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 augmentation augmentation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 p39c p39c NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 jun jun NOUN NN Number=Sing _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 10992 # text = We also observed that cytoplasmic p62c-fos and p39c-jun were present in HL60 cells and PHA-stimulated PBL. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 6 p62c p62c NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 fos fo NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 p39c p39c NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 jun jun NOUN NN Number=Sing _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 present present ADJ JJ Degree=Pos _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 HL60 HL60 NUM CD NumType=Card _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 PHA PHa NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 PBL pBl NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 10993 # text = However, no cytoplasmic p62c-fos was detected in unstimulated PBL, although in some cases cytoplasmic p39c-jun was detected, suggesting that subcellular compartmentalization of these proteinsmay occur under certain circumstances. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 no no DET DT _ _ _ _ _ 4 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 5 p62c p62c NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 fos fos NOUN NNS Number=Plur _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 12 PBL pBl NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 although although SCONJ IN _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 some some DET DT _ _ _ _ _ 17 cases case NOUN NNS Number=Plur _ _ _ _ 18 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 19 p39c p39c NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 jun jun NOUN NN Number=Sing _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 subcellular subcellular ADJ JJ Degree=Pos _ _ _ _ 28 compartmentalization compartmentalization NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 these these PRON DT Number=Plur|PronType=Dem _ _ _ _ 31 proteinsmay proteinsmay AUX MD VerbForm=Fin _ _ _ _ 32 occur occur VERB VB VerbForm=Inf _ _ _ _ 33 under under ADP IN _ _ _ _ _ 34 certain certain ADJ JJ Degree=Pos _ _ _ _ 35 circumstances circumstance NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 10994 # text = Document 0030012393 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012393 0030012393 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 10995 # text = Inhibition of T cell signaling by mitogen-activated protein kinase-targeted hematopoietic tyrosine phosphatase (HePTP). 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cell cell PROPN NNP Number=Sing _ _ _ _ 5 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 targeted target VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 15 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 16 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 HePTP HePTP NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 10996 # text = Activation of T lymphocytes to produce cytokines is regulated by the counterbalance of protein-tyrosine kinases and protein-tyrosine phosphatases, many of which have a high degree of substrate specificity because of physical association with their targets. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 produce produce VERB VB VerbForm=Inf _ _ _ _ 7 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 counterbalance counterbalance NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 15 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 16 kinases kinase NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 19 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 20 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 many many ADJ JJ Degree=Pos _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 high high ADJ JJ Degree=Pos _ _ _ _ 28 degree degree NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 substrate substrate ADJ JJ Degree=Pos _ _ _ _ 31 specificity specificity NOUN NN Number=Sing _ _ _ _ 32 because because ADP IN _ _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 physical physical ADJ JJ Degree=Pos _ _ _ _ 35 association association NOUN NN Number=Sing _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 38 targets target NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 10997 # text = Overexpression of hematopoietic protein-tyrosine phosphatase (HePTP) results in suppression of T lymphocyte activation as measured by T cell antigen receptor-induced activation of transcription factors binding to the 5' promoter of the interleukin-2 gene. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 4 protein- protein- PUNCT : _ _ _ _ SpaceAfter=No 5 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 6 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 HePTP Heptp NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 results result NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 suppression suppression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 as as SCONJ IN _ _ _ _ _ 18 measured measure VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cell cell PROPN NNP Number=Sing _ _ _ _ 22 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 23 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 factors factor NOUN NNS Number=Plur _ _ _ _ 30 binding bind VERB VBG VerbForm=Ger _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 ' 's PUNCT `` _ _ _ _ _ 35 promoter promoter NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 2 2 NUM CD NumType=Card _ _ _ _ 41 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 10998 # text = Efforts to pinpoint the exact site of action and specificity of HePTP in the signaling cascade revealed that HePTP acts directly on the mitogen-activated protein (MAP) kinases Erk1 and 2 and consequently reduces the magnitude and duration of their catalytic activation in intact T cells. 1 Efforts effort VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 2 to to PART TO _ _ _ _ _ 3 pinpoint pinpoint VERB VB VerbForm=Inf _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 exact exact ADJ JJ Degree=Pos _ _ _ _ 6 site site NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 action action NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 specificity specificity NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 HePTP Heptp NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 signaling signaling NOUN NN Number=Sing _ _ _ _ 16 cascade cascade NOUN NN Number=Sing _ _ _ _ 17 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 HePTP HePTP PROPN NNP Number=Sing _ _ _ _ 20 acts acts PROPN NNPS Number=Plur _ _ _ _ 21 directly directly ADV RB _ _ _ _ _ 22 on on ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 mitogen mitogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 protein protein NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 MAP map NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 kinases kinase NOUN NNS Number=Plur _ _ _ _ 32 Erk1 Erk1 PROPN NNP Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 2 2 NUM CD NumType=Card _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 consequently consequently ADV RB _ _ _ _ _ 37 reduces reduce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 magnitude magnitude NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 duration duration NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 44 catalytic catalytic ADJ JJ Degree=Pos _ _ _ _ 45 activation activation NOUN NN Number=Sing _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 intact intact ADJ JJ Degree=Pos _ _ _ _ 48 T t PROPN NNP Number=Sing _ _ _ _ 49 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 10999 # text = In contrast, HePTP had no effects on N-terminal c-Jun kinase or on events upstream of the MAP kinases. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 HePTP HePTP PROPN NNP Number=Sing _ _ _ _ 5 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 no no DET DT _ _ _ _ _ 7 effects effect NOUN NNS Number=Plur _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 terminal terminal NOUN NN Number=Sing _ _ _ _ 11 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 Jun Jun PROPN NNP Number=Sing _ _ _ _ 14 kinase kinase NOUN NN Number=Sing _ _ _ _ 15 or or CCONJ CC _ _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 events event NOUN NNS Number=Plur _ _ _ _ 18 upstream upstream NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 MAP map NOUN NN Number=Sing _ _ _ _ 22 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 11000 # text = The specificity of HePTP correlated with its physical association through its noncatalytic N terminus with Erk and another MAP kinase, p38, but not Jnk or other proteins. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 specificity specificity NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 HePTP HePTP PROPN NNP Number=Sing _ _ _ _ 5 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 8 physical physical ADJ JJ Degree=Pos _ _ _ _ 9 association association NOUN NN Number=Sing _ _ _ _ 10 through through ADP IN _ _ _ _ _ 11 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 12 noncatalytic noncatalytic ADJ JJ Degree=Pos _ _ _ _ 13 N n PROPN NNP Number=Sing _ _ _ _ 14 terminus terminus NOUN NN Number=Sing _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 Erk Erk PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 another another DET DT _ _ _ _ _ 19 MAP map NOUN NN Number=Sing _ _ _ _ 20 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 p38 p38 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 but but CCONJ CC _ _ _ _ _ 25 not not ADV RB _ _ _ _ _ 26 Jnk Jnk PROPN NNP Number=Sing _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 other other ADJ JJ Degree=Pos _ _ _ _ 29 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 11001 # text = We propose that HePTP plays a negative role in antigen receptor signaling by specifically regulating MAP kinases in the cytosol and at early time points of T cell activation before the activation-induced expression of nuclear dual-specific MAP kinase phosphatases. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 HePTP HePTP PROPN NNP Number=Sing _ _ _ _ 5 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 negative negative ADJ JJ Degree=Pos _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 signaling signale VERB VBG VerbForm=Ger _ _ _ _ 13 by by SCONJ IN _ _ _ _ _ 14 specifically specifically ADV RB _ _ _ _ _ 15 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 16 MAP map NOUN NN Number=Sing _ _ _ _ 17 kinases kinase NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 at at ADP IN _ _ _ _ _ 23 early early ADJ JJ Degree=Pos _ _ _ _ 24 time time NOUN NN Number=Sing _ _ _ _ 25 points point NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 T t PROPN NNP Number=Sing _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ _ 30 before before ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 38 dual dual ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 specific specific ADJ JJ Degree=Pos _ _ _ _ 41 MAP map NOUN NN Number=Sing _ _ _ _ 42 kinase kinase NOUN NN Number=Sing _ _ _ _ 43 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11002 # text = Document 0030012394 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012394 0030012394 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11003 # text = Human T cell activation through the activation-inducer molecule/CD69 enhances the activity of transcription factor AP-1. 1 Human human PROPN NNP Number=Sing _ _ _ _ 2 T t PROPN NNP Number=Sing _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 through through ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 inducer inducer NOUN NN Number=Sing _ _ _ _ 10 molecule/CD69 molecule/cd69 NOUN NN Number=Sing _ _ _ _ 11 enhances enhance VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11004 # text = The induction of the AP-1 transcription factor has been ascribed to the early events leading to T cell differentiation and activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 12 ascribed ascribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 early early ADJ JJ Degree=Pos _ _ _ _ 16 events event NOUN NNS Number=Plur _ _ _ _ 17 leading lead VERB VBG VerbForm=Ger _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 11005 # text = We have studied the regulation of AP-1 activity in human peripheral blood T lymphocytes stimulated through the activation inducer molecule (AIM)/CD69 activation pathway. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 studied studie VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 regulation regulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 14 blood blood NOUN NN Number=Sing _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 17 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 through through ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 inducer inducer NOUN NN Number=Sing _ _ _ _ 22 molecule molecule NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 AIM aim NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 /CD69 /CD69 NUM CD NumType=Card _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ _ 28 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 11006 # text = Phorbol esters are required to induce AIM/CD69 cell-surface expression as well as for triggering the proliferation of T cells in conjunction with anti-AIM mAb. 1 Phorbol Phorbol NOUN NN Number=Sing _ _ _ _ 2 esters ester NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 induce induce VERB VB VerbForm=Inf _ _ _ _ 7 AIM/CD69 AIM/CD69 NUM CD NumType=Card _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 surface surface NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 as as ADV RB _ _ _ _ _ 13 well well ADV RB Degree=Pos _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 for for SCONJ IN _ _ _ _ _ 16 triggering trigger VERB VBG VerbForm=Ger _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 conjunction conjunction NOUN NN Number=Sing _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 anti anti X AFX _ _ _ _ SpaceAfter=No 26 -AIM -AIM PROPN NNP Number=Sing _ _ _ _ 27 mAb mAb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 11007 # text = Mobility shift assays showed that addition of anti-AIM mAb to PMA-treated T lymphocytes markedly enhanced the binding activity of AP-1 to its cognate sequence, the phorbol ester response element. 1 Mobility Mobility NOUN NN Number=Sing _ _ _ _ 2 shift shift NOUN NN Number=Sing _ _ _ _ 3 assays assays ADV RB _ _ _ _ _ 4 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 addition addition NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 anti anti X AFX _ _ _ _ SpaceAfter=No 9 -AIM -AIM PROPN NNP Number=Sing _ _ _ _ 10 mAb mAb PROPN NNP Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 17 markedly markedly ADV RB _ _ _ _ _ 18 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 binding bind VERB VBG VerbForm=Ger _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 28 cognate cognate NOUN NN Number=Sing _ _ _ _ 29 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 33 ester ester NOUN NN Number=Sing _ _ _ _ 34 response response NOUN NN Number=Sing _ _ _ _ 35 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 11008 # text = In contrast, anti-AIM mAb did not induce any change in the binding activity of NF-kappa B, a transcription factor whose activity is also regulated by protein kinase C. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 anti anti X AFX _ _ _ _ SpaceAfter=No 5 -AIM -AIM PROPN NNP Number=Sing _ _ _ _ 6 mAb mAb PROPN NNP Number=Sing _ _ _ _ 7 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 induce induce VERB VB VerbForm=Inf _ _ _ _ 10 any any DET DT _ _ _ _ _ 11 change change NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa PROPN NNP Number=Sing _ _ _ _ 20 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 26 activity activity NOUN NN Number=Sing _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 also also ADV RB _ _ _ _ _ 29 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 protein protein NOUN NN Number=Sing _ _ _ _ 32 kinase kinase NOUN NN Number=Sing _ _ _ _ 33 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 11009 # text = The increase in AP-1-binding activity was accompanied by the marked stimulation of the transcription of c-fos but not that of c-jun. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 increase increase NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 fos fo NOUN NNS Number=Plur _ _ _ _ 23 but but CCONJ CC _ _ _ _ _ 24 not not PART RB _ _ _ _ _ 25 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 c- c- SYM NFP _ _ _ _ SpaceAfter=No 28 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 11010 # text = Blockade of the DNA-binding complexes with an anti-Fos mAb demonstrated a direct participation of c-Fos in the AP-1 complexes induced by anti-AIM mAb. 1 Blockade Blockade NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 complexes complex NOUN NNS Number=Plur _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 anti anti X AFX _ _ _ _ SpaceAfter=No 11 -Fos -Fos PROPN NNP Number=Sing _ _ _ _ 12 mAb mAb PROPN NNP Number=Sing _ _ _ _ 13 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 direct direct ADJ JJ Degree=Pos _ _ _ _ 16 participation participation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 Fos Fo NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 complexes complexe NOUN NNS Number=Plur _ _ _ _ 27 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 anti anti X AFX _ _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 AIM aim PROPN NNP Number=Sing _ _ _ _ 32 mAb mAb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 11011 # text = Most of the AP-1 activity could be eliminated when the anti-AIM mAb was added to the culture medium in the presence of cycloheximide, suggesting that de novo protein synthesis is crucial for the induction of AP-1-binding activity. 1 Most most ADJ JJS Degree=Sup _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 could could AUX MD VerbForm=Fin _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 eliminated eliminate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 when when ADV WRB PronType=Int _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 anti anti X AFX _ _ _ _ SpaceAfter=No 14 -AIM -AIM PROPN NNP Number=Sing _ _ _ _ 15 mAb mAb PROPN NNP Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 added add VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 culture culture NOUN NN Number=Sing _ _ _ _ 21 medium medium NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 presence presence NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 29 that that SCONJ IN _ _ _ _ _ 30 de de PROPN NNP Number=Sing _ _ _ _ 31 novo novo NOUN NN Number=Sing _ _ _ _ 32 protein protein NOUN NN Number=Sing _ _ _ _ 33 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 34 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 36 for for ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 induction induction NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 binding bind VERB VBG VerbForm=Ger _ _ _ _ 45 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 11012 # text = These data provide the evidence that activation of human peripheral blood T cells through the AIM activation pathway regulate the activity of AP-1. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 provide provide VERB VB VerbForm=Inf _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 evidence evidence NOUN NN Number=Sing _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 11 blood blood NOUN NN Number=Sing _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 through through ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 AIM aim NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 pathway pathway NOUN NN Number=Sing _ _ _ _ 19 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11013 # text = Therefore, this pathway appears as a crucial step in the initiation of early T cell activation events. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 pathway pathway NOUN NN Number=Sing _ _ _ _ 5 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 as as ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 9 step step NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 initiation initiation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 early early ADJ JJ Degree=Pos _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 events event NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11014 # text = Document 0030012399 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012399 0030012399 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11015 # text = A critical role of Sp1- and Ets-related transcription factors in maintaining CTL-specific expression of the mouse perforin gene. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 critical critical ADJ JJ Degree=Pos _ _ _ _ 3 role role NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 Ets ets NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 related related ADJ JJ Degree=Pos _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 in in SCONJ IN _ _ _ _ _ 14 maintaining maintain VERB VBG VerbForm=Ger _ _ _ _ 15 CTL CTL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 mouse mouse NOUN NN Number=Sing _ _ _ _ 22 perforin perforin ADP IN _ _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11016 # text = This study was designed to determine the potential cis-elements involved in transcriptional regulation of the mouse perforin gene. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 designed design VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 determine determine VERB VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 potential potential ADJ JJ Degree=Pos _ _ _ _ 9 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 elements element NOUN NNS Number=Plur _ _ _ _ 12 involved involved ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 15 regulation regulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 mouse mouse NOUN NN Number=Sing _ _ _ _ 19 perforin perforin ADP IN _ _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 11017 # text = DNase I hypersensitive site (DHS) mapping revealed that the perforin locus contained six DHS within 7.0 kb of the 5' upstream sequence (-7.0 kb) and two DHS in intron 2. 1 DNase DNase INTJ UH _ _ _ _ _ 2 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 3 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 4 site site NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 DHS DHS NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 mapping mapping NOUN NN Number=Sing _ _ _ _ 9 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 perforin perforin NOUN NN Number=Sing _ _ _ _ 13 locus locus NOUN NN Number=Sing _ _ _ _ 14 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 six six NUM CD NumType=Card _ _ _ _ 16 DHS D NOUN NNS Number=Plur _ _ _ _ 17 within within ADP IN _ _ _ _ _ 18 7.0 7.0 NUM CD NumType=Card _ _ _ _ 19 kb kb NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ' ' PUNCT `` _ _ _ _ _ 24 upstream upstream NOUN NN Number=Sing _ _ _ _ 25 sequence sequence NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 7.0 7.0 NUM CD NumType=Card _ _ _ _ 29 kb kb NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 two two NUM CD NumType=Card _ _ _ _ 33 DHS D NOUN NNS Number=Plur _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 intron intron NOUN NN Number=Sing _ _ _ _ 36 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 11018 # text = The six 5' upstream and one intronic DHS were detected in only perforin-expressing lymphocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 six six NUM CD NumType=Card _ _ _ _ 3 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 ' ' PUNCT '' _ _ _ _ _ 5 upstream upstream NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 one one NUM CD NumType=Card _ _ _ _ 8 intronic intronic ADJ JJ Degree=Pos _ _ _ _ 9 DHS D NOUN NNS Number=Plur _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 only only ADV RB _ _ _ _ _ 14 perforin perforin ADV RB _ _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 17 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 11019 # text = Chloramphenicol acetyltransferase (CAT) activities directed by 5' upstream promoter were detected preferentially in perforin-expressing cell lines. 1 Chloramphenicol Chloramphenicol PROPN NNP Number=Sing _ _ _ _ 2 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 CAT Cat NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 activities activity NOUN NNS Number=Plur _ _ _ _ 7 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ' ' PUNCT `` _ _ _ _ _ 11 upstream upstream NOUN NN Number=Sing _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 preferentially preferentially ADV RB _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 perforin perforin NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 11020 # text = A construct termed PFP5a containing -795 bp exhibited the highest CAT activity, and PFP9a20 containing only -73 bp also produced significantly high CAT activity in CTLL-R8 cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 construct construct NOUN NN Number=Sing _ _ _ _ 3 termed term VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 PFP5 PFP5 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 containing containing VERB VBG VerbForm=Ger _ _ _ _ 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 795 795 NUM CD NumType=Card _ _ _ _ 9 bp bp NOUN NN Number=Sing _ _ _ _ 10 exhibited exhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 highest highest ADJ JJS Degree=Sup _ _ _ _ 13 CAT cat NOUN NN Number=Sing _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 PFP9a20 PFP9a20 PROPN NNP Number=Sing _ _ _ _ 18 containing contain VERB VBG VerbForm=Ger _ _ _ _ 19 only only ADV RB _ _ _ _ _ 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 73 73 NUM CD NumType=Card _ _ _ _ 22 bp bp NOUN NN Number=Sing _ _ _ _ 23 also also ADV RB _ _ _ _ _ 24 produced produce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 significantly significantly ADV RB _ _ _ _ _ 26 high high ADJ JJ Degree=Pos _ _ _ _ 27 CAT cat NOUN NN Number=Sing _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 CTLL CTLL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 R8 R8 NUM CD NumType=Card _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 11021 # text = The proximal region in PFP9a20 contained two potential Sp1 binding sites (GC box and GT box) and one Ets binding site (EBS). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 3 region region NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 PFP9a20 PFP9a20 NUM CD NumType=Card _ _ _ _ 6 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 potential potential NOUN NN Number=Sing _ _ _ _ 9 Sp1 Sp1 NOUN NN Number=Sing _ _ _ _ 10 binding binding VERB VBG VerbForm=Ger _ _ _ _ 11 sites site NOUN NNS Number=Plur _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 GC Gc NOUN NN Number=Sing _ _ _ _ 14 box box NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 GT Gt NOUN NN Number=Sing _ _ _ _ 17 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 one one NUM CD NumType=Card _ _ _ _ 21 Ets ets PROPN NNPS Number=Plur _ _ _ _ 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 site site NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 EBS EBS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 11022 # text = Electrophoretic mobility shift assay showed that each of the cis-elements bound specific protein factors. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assay assay NOUN NN Number=Sing _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 each each DET DT _ _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 -elements -element NOUN NNS Number=Plur _ _ _ _ 12 bound bound ADJ JJ Degree=Pos _ _ _ _ 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 11023 # text = When single-point mutation was introduced to each GC box, EBS, and GT box in PFP9a20, at least 3-fold less CAT activity was observed in CTLL-R8 cells. 1 When when ADV WRB PronType=Int _ _ _ _ 2 single single ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 point point NOUN NN Number=Sing _ _ _ _ 5 mutation mutation NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 introduced introduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 each each DET DT _ _ _ _ _ 10 GC Gc PROPN NNP Number=Sing _ _ _ _ 11 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 EBS EBS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 GT Gt NOUN NN Number=Sing _ _ _ _ 17 box box NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 PFP9a20 PFP9a20 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 at at ADV RB _ _ _ _ _ 22 least least ADV RBS Degree=Sup _ _ _ _ 23 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 fold fold VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 less less ADV RBR Degree=Cmp _ _ _ _ 27 CAT cat ADJ JJ Degree=Pos _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 CTLL CTLL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 R8 R8 NUM CD NumType=Card _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 11024 # text = To confirm the importance of the three cis-acting elements in the perforin gene expression, point mutation was introduced again to each proximal GC box, EBS, and GT box of PFP5a. 1 To to PART TO _ _ _ _ _ 2 confirm confirm VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 importance importance NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 three three NUM CD NumType=Card _ _ _ _ 8 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 -acting -acting VERB VBG VerbForm=Ger _ _ _ _ 10 elements element NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 perforin perforin ADJ JJ Degree=Pos _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 point point NOUN NN Number=Sing _ _ _ _ 18 mutation mutation NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 introduced introduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 again again ADV RB _ _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 each each DET DT _ _ _ _ _ 24 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 25 GC Gc NOUN NN Number=Sing _ _ _ _ 26 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 EBS EBS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 GT gt NOUN NN Number=Sing _ _ _ _ 32 box box NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 PFP5 PFP5 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 a a NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 11025 # text = The point mutations resulted in a 2.5- to 3-fold reduction of CAT activity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 point point NOUN NN Number=Sing _ _ _ _ 3 mutations mutation NOUN NNS Number=Plur _ _ _ _ 4 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 2.5 2.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 fold fold NOUN NN Number=Sing _ _ _ _ 13 reduction reduction NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 CAT Cat ADJ JJ Degree=Pos _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 11026 # text = The results suggest that a combination of the three proximal cis-acting elements may constitute a minimal region responsible for CTL-specific expression of perforin. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 combination combination NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 three three NUM CD NumType=Card _ _ _ _ 10 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 11 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 -acting -act ADJ JJ Degree=Pos _ _ _ _ 13 elements element NOUN NNS Number=Plur _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 constitute constitute VERB VB VerbForm=Inf _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 18 region region NOUN NN Number=Sing _ _ _ _ 19 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 CTL CTL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 specific specific ADJ JJ Degree=Pos _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 perforin perforin NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11027 # text = Document 0030012400 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012400 0030012400 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11028 # text = Retinoic acid downmodulates erythroid differentiation and GATA1 expression in purified adult-progenitor culture. 1 Retinoic Retinoic ADJ JJ Degree=Pos _ _ _ _ 2 acid acid NOUN NN Number=Sing _ _ _ _ 3 downmodulates downmodulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 5 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 GATA1 Gata1 NUM CD NumType=Card _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 adult adult NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 14 culture culture NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11029 # text = All-trans retinoic acid (RA) is an important morphogen in vertebrate development, a normal constituent in human adult blood and is also involved in the control of cell growth and differentiation in acute promyelocytic leukemia. 1 All all DET DT _ _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 trans tran NOUN NNS Number=Plur _ _ _ _ 4 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 5 acid acid NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 important important ADJ JJ Degree=Pos _ _ _ _ 12 morphogen morphogen NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 vertebrate vertebrate ADJ JJ Degree=Pos _ _ _ _ 15 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 normal normal ADJ JJ Degree=Pos _ _ _ _ 19 constituent constituent NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 adult adult NOUN NN Number=Sing _ _ _ _ 23 blood blood NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 also also ADV RB _ _ _ _ _ 27 involved involved ADJ JJ Degree=Pos _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 control control NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 growth growth NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 acute acute ADJ JJ Degree=Pos _ _ _ _ 38 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ _ 39 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 11030 # text = We have examined the effects of RA on normal hematopoiesis by using early hematopoietic progenitor cells (HPC) stringently purified from adult peripheral blood. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 RA RA PROPN NNP Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 normal normal ADJ JJ Degree=Pos _ _ _ _ 10 hematopoiesis hematopoiesis NOUN NN Number=Sing _ _ _ _ 11 by by SCONJ IN _ _ _ _ _ 12 using use VERB VBG VerbForm=Ger _ _ _ _ 13 early early ADV RB Degree=Pos _ _ _ _ 14 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 15 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 HPC HPC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 stringently stringently ADV RB _ _ _ _ _ 21 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 adult adult NOUN NN Number=Sing _ _ _ _ 24 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 25 blood blood NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11031 # text = In clonogenetic fetal calf serum-supplemented (FCS+) or -nonsupplemented (FCS-) culture treated with saturating levels of interleukin-3 (IL-3) granulocyte-macrophage colony-stimulating factor (GM-CSF) and erythropoietin (Ep) (combined with c-kit ligand in FCS(-)-culture conditions), RA induces a dramatic dose-dependent shift from erythroid to granulomonocytic colony formation, the latter colonies being essentially represented by granulocytic clones. 1 In in ADP IN _ _ _ _ _ 2 clonogenetic clonogenetic ADJ JJ Degree=Pos _ _ _ _ 3 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 4 calf calf NOUN NN Number=Sing _ _ _ _ 5 serum- serum- PUNCT : _ _ _ _ SpaceAfter=No 6 supplemented supplement VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 FCS FCS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 + + SYM SYM _ _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 nonsupplemented nonsupplemented ADJ JJ Degree=Pos _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 FCS Fcs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 culture culture NOUN NN Number=Sing _ _ _ _ 19 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 saturating saturating NOUN NN Number=Sing _ _ _ _ 22 levels level NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 3 3 NUM CD NumType=Card _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 35 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 38 factor factor NOUN NN Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 erythropoietin erythropoietin NOUN NN Number=Sing _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 Ep Ep PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ _ 49 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 50 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 51 with with ADP IN _ _ _ _ _ 52 c- c- SYM NFP _ _ _ _ SpaceAfter=No 53 kit kit NOUN NN Number=Sing _ _ _ _ 54 ligand ligand NOUN NN Number=Sing _ _ _ _ 55 in in ADP IN _ _ _ _ _ 56 FCS FCS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 57 (- (- PUNCT . _ _ _ _ SpaceAfter=No 58 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 59 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 60 culture culture NOUN NN Number=Sing _ _ _ _ 61 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 62 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 63 , , PUNCT , _ _ _ _ _ 64 RA RA PROPN NNP Number=Sing _ _ _ _ 65 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 66 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 67 dramatic dramatic ADJ JJ Degree=Pos _ _ _ _ 68 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 69 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 70 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 71 shift shift NOUN NN Number=Sing _ _ _ _ 72 from from ADP IN _ _ _ _ _ 73 erythroid erythroid NOUN NN Number=Sing _ _ _ _ 74 to to ADP IN _ _ _ _ _ 75 granulomonocytic granulomonocytic ADJ JJ Degree=Pos _ _ _ _ 76 colony colony NOUN NN Number=Sing _ _ _ _ 77 formation formation NOUN NN Number=Sing _ _ _ SpaceAfter=No 78 , , PUNCT , _ _ _ _ _ 79 the the DET DT Definite=Def|PronType=Art _ _ _ _ 80 latter latter ADJ JJ Degree=Pos _ _ _ _ 81 colonies colony NOUN NNS Number=Plur _ _ _ _ 82 being be AUX VBG VerbForm=Ger _ _ _ _ 83 essentially essentially ADV RB _ _ _ _ _ 84 represented represent VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 85 by by ADP IN _ _ _ _ _ 86 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 87 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 88 . . PUNCT . _ _ _ _ _ # sent_id = 11032 # text = This shift is apparently not caused by a recruitment phenomenon, because in FCS+ culture, the total number of colonies is not significantly modified by RA addition. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 shift shift NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 apparently apparently ADV RB _ _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 caused cause VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 10 phenomenon phenomenon NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 because because SCONJ IN _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 FCS FCS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 + + SYM SYM _ _ _ _ _ 16 culture culture NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 total total ADJ JJ Degree=Pos _ _ _ _ 20 number number NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 colonies colony NOUN NNS Number=Plur _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 not not PART RB _ _ _ _ _ 25 significantly significantly ADV RB _ _ _ _ _ 26 modified modify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 RA RA PROPN NNP Number=Sing _ _ _ _ 29 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 11033 # text = In FCS- liquid-suspension culture supplemented with saturating Ep level and low-dose IL-3/GM-CSF, adult HPC undergo unilineage erythropoietic differentiation: 1 In in ADP IN _ _ _ _ _ 2 FCS FCS ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ _ 4 liquid liquid NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 suspension suspension NOUN NN Number=Sing _ _ _ _ 7 culture culture NOUN NN Number=Sing _ _ _ _ 8 supplemented supplement VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 with with SCONJ IN _ _ _ _ _ 10 saturating saturat VERB VBG VerbForm=Ger _ _ _ _ 11 Ep Ep PROPN NNP Number=Sing _ _ _ _ 12 level level NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 low low ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 dose dose NOUN NN Number=Sing _ _ _ _ 17 IL-3/GM IL-3/Gm NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 CSF Csf NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 adult adult NOUN NN Number=Sing _ _ _ _ 22 HPC Hpc NOUN NN Number=Sing _ _ _ _ 23 undergo undergo NOUN NN Number=Sing _ _ _ _ 24 unilineage unilineage NOUN NN Number=Sing _ _ _ _ 25 erythropoietic erythropoietic ADJ JJ Degree=Pos _ _ _ _ 26 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 : : PUNCT : _ _ _ _ _ # sent_id = 11034 # text = Here again, treatment with high-dose RA induces a shift from the erythroid to granulocytic differentiation pathway. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 again again ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 treatment treatment NOUN NN Number=Sing _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 dose dose NOUN NN Number=Sing _ _ _ _ 9 RA Ra NOUN NN Number=Sing _ _ _ _ 10 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 shift shift NOUN NN Number=Sing _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 erythroid erythroid NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 18 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 19 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 11035 # text = Studies on RA time-response or pulse treatment in semisolid or liquid culture show that early RA addition is most effective, thus indicating that early but not late HPC are sensitive to its action. 1 Studies study NOUN NNS Number=Plur _ _ _ _ 2 on on ADP IN _ _ _ _ _ 3 RA RA PROPN NNP Number=Sing _ _ _ _ 4 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 response response NOUN NN Number=Sing _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 pulse pulse NOUN NN Number=Sing _ _ _ _ 9 treatment treatment NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 semisolid semisolid ADJ JJ Degree=Pos _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 liquid liquid ADJ JJ Degree=Pos _ _ _ _ 14 culture culture NOUN NN Number=Sing _ _ _ _ 15 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 early early ADJ JJ Degree=Pos _ _ _ _ 18 RA RA NOUN NN Number=Sing _ _ _ _ 19 addition addition NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 most most ADV RBS _ _ _ _ _ 22 effective effective ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 thus thus ADV RB _ _ _ _ _ 25 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 early early ADJ JJ Degree=Pos _ _ _ _ 28 but but CCONJ CC _ _ _ _ _ 29 not not ADV RB _ _ _ _ _ 30 late late ADJ JJ Degree=Pos _ _ _ _ 31 HPC Hpc PROPN NNPS Number=Plur _ _ _ _ 32 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 34 to to ADP IN _ _ _ _ _ 35 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 36 action action NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 11036 # text = We then analyzed the expression of the master GATA1 gene, which encodes a finger transcription factor required for normal erythroid development; addition of RA to HPC stimulated into unilineage erythropoietic differentiation in liquid culture caused a virtually complete inhibition of GATA1 mRNA induction. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 then then ADV RB PronType=Dem _ _ _ _ 3 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 master master NOUN NN Number=Sing _ _ _ _ 9 GATA1 GATA1 PROPN NNP Number=Sing _ _ _ _ 10 gene gene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 finger finger NOUN NN Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 normal normal ADJ JJ Degree=Pos _ _ _ _ 21 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 22 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ; ; PUNCT , _ _ _ _ _ 24 addition addition NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 RA RA PROPN NNP Number=Sing _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 HPC HPC PROPN NNP Number=Sing _ _ _ _ 29 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 into into ADP IN _ _ _ _ _ 31 unilineage unilineage ADJ JJ Degree=Pos _ _ _ _ 32 erythropoietic erythropoietic ADJ JJ Degree=Pos _ _ _ _ 33 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 liquid liquid ADJ JJ Degree=Pos _ _ _ _ 36 culture culture NOUN NN Number=Sing _ _ _ _ 37 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 virtually virtually ADV RB _ _ _ _ _ 40 complete complete ADJ JJ Degree=Pos _ _ _ _ 41 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 GATA1 GATA1 PROPN NNP Number=Sing _ _ _ _ 44 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 45 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 11037 # text = These results indicate that RA directly inhibits the erythroid differentiation program at the level of early adult HPC, and may lead to a shift from the erythroid to granulocytic differentiation pathway. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 RA RA PROPN NNP Number=Sing _ _ _ _ 6 directly directly ADV RB _ _ _ _ _ 7 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 10 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 11 program program NOUN NN Number=Sing _ _ _ _ 12 at at ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 level level NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 early early ADJ JJ Degree=Pos _ _ _ _ 17 adult adult NOUN NN Number=Sing _ _ _ _ 18 HPC Hpc NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 may may AUX MD VerbForm=Fin _ _ _ _ 22 lead lead VERB VB VerbForm=Inf _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 shift shift NOUN NN Number=Sing _ _ _ _ 26 from from ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 erythroid erythroid NOUN NN Number=Sing _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 31 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 32 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 11038 # text = This phenomenon is correlated with inhibition of GATA1 induction in the early stages of erythropoietic differentiation. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 phenomenon phenomenon NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 correlated correlate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 GATA1 GATA1 NUM CD NumType=Card _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 early early ADJ JJ Degree=Pos _ _ _ _ 13 stages stage NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 erythropoietic erythropoietic ADJ JJ Degree=Pos _ _ _ _ 16 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11039 # text = Document 0030012410 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012410 0030012410 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11040 # text = STAT-related transcription factors are constitutively activated in peripheral blood cells from acute leukemia patients. 1 STAT Stat ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 related related ADJ JJ Degree=Pos _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 factors factor NOUN NNS Number=Plur _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 constitutively constitutively ADV RB _ _ _ _ _ 8 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 11 blood blood NOUN NN Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 acute acute ADJ JJ Degree=Pos _ _ _ _ 15 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 16 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11041 # text = A signal transduction pathway activated by many cytokines has recently been elaborated. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 signal signal NOUN NN Number=Sing _ _ _ _ 3 transduction transduction NOUN NN Number=Sing _ _ _ _ 4 pathway pathway NOUN NN Number=Sing _ _ _ _ 5 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 many many ADJ JJ Degree=Pos _ _ _ _ 8 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 9 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 recently recently ADV RB _ _ _ _ _ 11 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 12 elaborated elaborate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 11042 # text = The JAK kinases and the signal transducers and activators of transcription (STAT) factors have been found to be essential components. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 JAK JAK PROPN NNP Number=Sing _ _ _ _ 3 kinases kinase NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 signal signal ADJ JJ Degree=Pos _ _ _ _ 7 transducers transducer NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 activators activator NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 STAT Stat NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ _ 16 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 18 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 be be AUX VB VerbForm=Inf _ _ _ _ 21 essential essential ADJ JJ Degree=Pos _ _ _ _ 22 components component NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 11043 # text = In this report, we describe the presence of constitutively activated 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 describe describe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 presence presence NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 constitutively constitutively ADV RB _ _ _ _ _ 11 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ # sent_id = 11044 # text = STAT factors in peripheral blood cells from patients with acute leukemia. 1 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 5 blood blood NOUN NN Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 patients patient NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 acute acute NOUN NN Number=Sing _ _ _ _ 11 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 11045 # text = We used oligonucleotide probes from the beta-casein and IRF-1 gene promoters and the ISRE probe to detect STAT proteins in nuclear extracts from acute leukemia cells in bandshift assays. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 oligonucleotide oligonucleotide ADJ JJ Degree=Pos _ _ _ _ 4 probes probe NOUN NNS Number=Plur _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 casein casein NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 IRF Irf NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 promoters promoter NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 ISRE Isre ADJ JJ Degree=Pos _ _ _ _ 19 probe probe NOUN NN Number=Sing _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 detect detect VERB VB VerbForm=Inf _ _ _ _ 22 STAT Stat NOUN NN Number=Sing _ _ _ _ 23 proteins protein NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 26 extracts extract NOUN NNS Number=Plur _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 acute acute ADJ JJ Degree=Pos _ _ _ _ 29 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 bandshift bandshift ADJ JJ Degree=Pos _ _ _ _ 33 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 11046 # text = Specific DNA protein complex formation was observed with the probes from the beta-casein and IRF-1 gene promoters, but not with the ISRE oligonucleotide probe, when cell extracts from acute lymphoblastic leukemia (ALL) and acute myeloid leukemia (AML) were investigated. 1 Specific specific ADJ JJ Degree=Pos _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 complex complex NOUN NN Number=Sing _ _ _ _ 5 formation formation NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 probes probe NOUN NNS Number=Plur _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 casein casein NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 IRF IRF NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 but but CCONJ CC _ _ _ _ _ 24 not not ADV RB _ _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 ISRE Isre NOUN NN Number=Sing _ _ _ _ 28 oligonucleotide oligonucleotide ADV RB _ _ _ _ _ 29 probe probe ADV RB _ _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 when when ADV WRB PronType=Int _ _ _ _ 32 cell cell VERB VB VerbForm=Inf _ _ _ _ 33 extracts extract NOUN NNS Number=Plur _ _ _ _ 34 from from ADP IN _ _ _ _ _ 35 acute acute ADJ JJ Degree=Pos _ _ _ _ 36 lymphoblastic lymphoblastic ADJ JJ Degree=Pos _ _ _ _ 37 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 ALL all ADV RB _ _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 acute acute VERB VB VerbForm=Inf _ _ _ _ 43 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 44 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 AML aml PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 ) ) PUNCT -RRB- _ _ _ _ _ 48 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 49 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 11047 # text = We used nonradioactive oligonucleotides as competitors to show the specificity of the complex formation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 nonradioactive nonradioactive ADJ JJ Degree=Pos _ _ _ _ 4 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 competitors competitor NOUN NNS Number=Plur _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 show show VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 specificity specificity NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 complex complex ADJ JJ Degree=Pos _ _ _ _ 14 formation formation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 11048 # text = Specific antibodies directed against the individual STAT proteins were used in supershift experiments. 1 Specific specific ADJ JJ Degree=Pos _ _ _ _ 2 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 3 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 against against ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 individual individual ADJ JJ Degree=Pos _ _ _ _ 7 STAT Stat NOUN NN Number=Sing _ _ _ _ 8 proteins protein NOUN NNS Number=Plur _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 supershift supershift ADJ JJ Degree=Pos _ _ _ _ 13 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 11049 # text = STAT5- and STAT1-related factors were detected in ALL and STAT1-, STAT3-, and STAT5-related proteins were present in nuclear cell extracts from AML. 1 STAT5 stat5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 STAT1 stat1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 related related ADJ JJ Degree=Pos _ _ _ _ 7 factors factor NOUN NNS Number=Plur _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 ALL all PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 STAT STAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 STAT3 STAT3 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 STAT5 stat5 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 related related ADJ JJ Degree=Pos _ _ _ _ 24 proteins protein NOUN NNS Number=Plur _ _ _ _ 25 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 present presend ADJ JJ Degree=Pos _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 extracts extract NOUN NNS Number=Plur _ _ _ _ 31 from from ADP IN _ _ _ _ _ 32 AML AML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 11050 # text = Since the cells were not treated with cytokines before the nuclear proteins were extracted, we conclude that these factors are constitutively activated in vivo. 1 Since since SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 treated treat VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 9 before before ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 proteins protein NOUN NNS Number=Plur _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 extracted extract VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 17 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 20 factors factor NOUN NNS Number=Plur _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 constitutively constitutively ADV RB _ _ _ _ _ 23 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11051 # text = It is likely that the constitutive activation of 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 likely likely ADJ JJ Degree=Pos _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ # sent_id = 11052 # text = STAT proteins is a part of the events of leukemogenesis. 1 STAT Stat PRON WP PronType=Int _ _ _ _ 2 proteins protein VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 part part NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 events event NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 leukemogenesis leukemogenesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11053 # text = Document 0030012413 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012413 0030012413 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11054 # text = Glucocorticoid-induced apoptosis of lymphoid cells. 1 Glucocorticoid Glucocorticoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11055 # text = The induction of cell death in lymphoid cells by glucocorticoids is one of the earliest and most thoroughly studied models of apoptosis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 death death NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 one one NUM CD NumType=Card _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 earliest earliest ADJ JJS Degree=Sup _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 most most ADV RBS _ _ _ _ _ 18 thoroughly thoroughly ADV RB _ _ _ _ _ 19 studied study VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 models model NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 11056 # text = Although the exact mechanism by which apoptosis occurs in lymphocytes is unknown many biochemical and molecular changes have been shown to occur in these cells in response to glucocorticoids. 1 Although although SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 exact exact ADJ JJ Degree=Pos _ _ _ _ 4 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 apoptosis apoptosis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 occurs occur NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 unknown unknown ADV RB _ _ _ _ _ 13 many many ADJ JJ Degree=Pos _ _ _ _ 14 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 17 changes change NOUN NNS Number=Plur _ _ _ _ 18 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 20 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 occur occur VERB VB VerbForm=Inf _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 response response NOUN NN Number=Sing _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 11057 # text = The role of chromatin degradation and endonucleases in the apoptotic process has been closely studied, as well as the involvement of several oncogenes in glucocorticoid-induced cell lysis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 5 degradation degradation NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 endonucleases endonuclease NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 11 process process NOUN NN Number=Sing _ _ _ _ 12 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 14 closely closely ADV RB _ _ _ _ _ 15 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 as as ADV RB _ _ _ _ _ 18 well well ADV RB Degree=Pos _ _ _ _ 19 as as ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 involvement involvement NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 several several ADJ JJ Degree=Pos _ _ _ _ 24 oncogenes oncogene NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 lysis lysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11058 # text = In addition, the clinical importance of glucocorticoid-induced apoptosis in the treatment of lymphoid neoplasms has recently received increased attention. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 6 importance importance NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 glucocorticoid glucocorticoid VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 treatment treatment NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 17 neoplasms neoplasm NOUN NNS Number=Plur _ _ _ _ 18 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 recently recently ADV RB _ _ _ _ _ 20 received receive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 attention attention NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11059 # text = Document 0030012420 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012420 0030012420 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11060 # text = Targeted degradation of c-Fos, but not v-Fos, by a phosphorylation-dependent signal on c-Jun. 1 Targeted target VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 degradation degradation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 Fos Fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 but but CCONJ CC _ _ _ _ _ 9 not not ADV RB _ _ _ _ _ 10 v- v- SYM NFP _ _ _ _ SpaceAfter=No 11 Fos Fos PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 18 signal signal NOUN NN Number=Sing _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11061 # text = The proto-oncogene products c-Fos and c-Jun heterodimerize through their leucine zippers to form the AP-1 transcription factor. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 -oncogene -oncogene NOUN NN Number=Sing _ _ _ _ 4 products product NOUN NNS Number=Plur _ _ _ _ 5 c- c- PUNCT : _ _ _ _ SpaceAfter=No 6 Fos Fo NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 Jun Jun PROPN NNP Number=Sing _ _ _ _ 11 heterodimerize heterodimerize VERB VB VerbForm=Inf _ _ _ _ 12 through through ADP IN _ _ _ _ _ 13 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 leucine leucine NOUN NN Number=Sing _ _ _ _ 15 zippers zipper NOUN NNS Number=Plur _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 form form VERB VB VerbForm=Inf _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 11062 # text = The transcriptional activity of the heterodimer is regulated by signal-dependent phosphorylation and dephosphorylation events. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 3 activity activity NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 13 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 dephosphorylation dephosphorylation NOUN NN Number=Sing _ _ _ _ 16 events event NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 11063 # text = The stability of c-Fos was found to also be controlled by intracellular signal transduction. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 stability stability NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 Fos Fos PROPN NNP Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 also also ADV RB _ _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 15 signal signal NOUN NN Number=Sing _ _ _ _ 16 transduction transduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 11064 # text = In transient expression and in vitro degradation experiments, the stability of c-Fos was decreased when the protein was dimerized with phosphorylated c-Jun. 1 In in ADP IN _ _ _ _ _ 2 transient transient ADJ JJ Degree=Pos _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 7 degradation degradation NOUN NN Number=Sing _ _ _ _ 8 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 stability stability NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 Fos Fos PROPN NNP Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 when when ADV WRB PronType=Int _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 dimerized dimerize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 c- c- SYM SYM _ _ _ _ SpaceAfter=No 26 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 11065 # text = c-Jun protein isolated from phorbol ester-induced cells did not target c-Fos for degradation, which suggests that c-Fos is transiently stabilized after stimulation of cell growth. 1 c class NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 Jun Jun PROPN NNP Number=Sing _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 8 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 target target VERB VB VerbForm=Inf _ _ _ _ 15 c- c- PUNCT : _ _ _ _ SpaceAfter=No 16 Fos Fo NOUN NNS Number=Plur _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 which which PRON WDT PronType=Rel _ _ _ _ 21 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 that that SCONJ IN _ _ _ _ _ 23 c- c- SYM NFP _ _ _ _ SpaceAfter=No 24 Fos Fos PROPN NNP Number=Sing _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 transiently transiently ADV RB _ _ _ _ _ 27 stabilized stabilize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 after after ADP IN _ _ _ _ _ 29 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 11066 # text = v-Fos protein, the retroviral counterpart of c-Fos, was not susceptible to degradation targeted by c-Jun. 1 v- v- SYM NFP _ _ _ _ SpaceAfter=No 2 Fos Fos PROPN NNP Number=Sing _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 retroviral retroviral ADJ JJ Degree=Pos _ _ _ _ 7 counterpart counterpart NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 Fos Fos NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 susceptible susceptible ADJ JJ Degree=Pos _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 degradation degradation NOUN NN Number=Sing _ _ _ _ 18 targeted target VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11067 # text = Document 0030012427 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012427 0030012427 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11068 # text = Functional antagonism between vitamin D3 and retinoic acid in the regulation of CD14 and CD23 expression during monocytic differentiation of U-937 cells. 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 antagonism antagonism NOUN NN Number=Sing _ _ _ _ 3 between between ADP IN _ _ _ _ _ 4 vitamin vitamin ADJ JJ Degree=Pos _ _ _ _ 5 D3 D3 NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 8 acid acid NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 regulation regulation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 14 14 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 CD23 CD23 NUM CD NumType=Card _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 during during ADP IN _ _ _ _ _ 19 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 20 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 937 937 NUM CD NumType=Card _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11069 # text = 1,25 alpha-Dihydroxicholecalciferol (VitD3) and retinoic acid (RA) are important regulators of the proliferation and differentiation of several cell types. 1 1,25 1,25 NUM CD NumType=Card _ _ _ _ 2 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT : _ _ _ _ SpaceAfter=No 4 Dihydroxicholecalciferol Dihydroxicholecalciferol PROPN NNP Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 VitD3 VitD3 X LS _ _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 10 acid acid NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 RA Ra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 important important ADJ JJ Degree=Pos _ _ _ _ 16 regulators regulator NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 several several ADJ JJ Degree=Pos _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11070 # text = This paper describes how the expression of the monocyte-macrophage Ag, CD14, and the low affinity Fc receptor for IgE, CD23, were inversely regulated during VitD3- and RA-induced monocytic differentiation of human U-937 monoblasts. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 paper paper NOUN NN Number=Sing _ _ _ _ 3 describes describe VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 how how ADV WRB PronType=Int _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 monocyte- monocyte- SYM SYM _ _ _ _ SpaceAfter=No 10 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 11 Ag ag PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 CD14 CD14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 low low ADJ JJ Degree=Pos _ _ _ _ 18 affinity affinity NOUN NN Number=Sing _ _ _ _ 19 Fc Fc NOUN NN Number=Sing _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 IgE IgE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 CD23 CD23 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 inversely inversely ADV RB _ _ _ _ _ 28 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 during during ADP IN _ _ _ _ _ 30 VitD3 VitD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 RA Ra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 37 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 human human ADJ JJ Degree=Pos _ _ _ _ 40 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - SYM SYM _ _ _ _ SpaceAfter=No 42 937 937 NUM CD NumType=Card _ _ _ _ 43 monoblasts monoblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 11071 # text = PMA induced the expression of both CD14 and CD23 mRNA and protein. 1 PMA PMA PROPN NNP Number=Sing _ _ _ _ 2 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 both both DET DT _ _ _ _ _ 7 CD CD NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 14 14 NUM CD NumType=Card _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 CD23 CD23 NUM CD NumType=Card _ _ _ _ 11 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 11072 # text = Exposure to VitD3 rapidly induced the de novo expression of CD14 mRNA and protein. 1 Exposure exposure NOUN NN Number=Sing _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 VitD3 VitD3 NUM CD NumType=Card _ _ _ _ 4 rapidly rapidly ADV RB _ _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 de de PROPN NNP Number=Sing _ _ _ _ 8 novo novo NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 14 14 NUM CD NumType=Card _ _ _ _ 13 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 11073 # text = The addition of cycloheximide completely blocked the VitD3 induction of CD14 mRNA expression, indicating that the induction was dependent on ongoing protein synthesis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ _ 5 completely completely ADV RB _ _ _ _ _ 6 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 VitD3 VitD3 NOUN NN Number=Sing _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 CD CD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 14 14 NUM CD NumType=Card _ _ _ _ 13 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 induction induction NOUN NN Number=Sing _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 22 on on ADP IN _ _ _ _ _ 23 ongoing ongoing ADJ JJ Degree=Pos _ _ _ _ 24 protein protein NOUN NN Number=Sing _ _ _ _ 25 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11074 # text = While inducing CD14 expression, VitD3 concomitantly suppressed the basal, PMA-, and RA-inducible CD23 expression in a dose-dependent manner. 1 While while SCONJ IN _ _ _ _ _ 2 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 3 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 14 14 NUM CD NumType=Card _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 VitD3 VitD3 NUM CD NumType=Card _ _ _ _ 8 concomitantly concomitantly ADV RB _ _ _ _ _ 9 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 basal basal NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 20 CD23 CD23 NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 27 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 11075 # text = In contrast, U-937 cells induced by RA strongly increased their expression of CD23 mRNA and protein, whereas they completely lacked detectable CD14 cell surface or mRNA expression. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 937 937 NUM CD NumType=Card _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 RA RA PROPN NNP Number=Sing _ _ _ _ 11 strongly strongly ADV RB _ _ _ _ _ 12 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 CD23 CD23 NUM CD NumType=Card _ _ _ _ 17 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 whereas whereas SCONJ IN _ _ _ _ _ 22 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 23 completely completely ADV RB _ _ _ _ _ 24 lacked lack VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 26 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 14 14 NUM CD NumType=Card _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 surface surface NOUN NN Number=Sing _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 mRNA mRNa DET DT Definite=Ind|PronType=Art _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 11076 # text = Furthermore, the VitD3- and the PMA-induced CD14 expression was inhibited as a temporal consequence of the RA-induced differentiation. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 VitD3 VitD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 14 14 NUM CD NumType=Card _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 temporal temporal ADJ JJ Degree=Pos _ _ _ _ 19 consequence consequence NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11077 # text = The results suggest that there exists a functional antagonism between VitD3 and RA that may have important implications for the regulation of certain immune and inflammatory responses through their inverse effects on CD14 and CD23 gene expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 there there PRON EX _ _ _ _ _ 6 exists exist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 functional functional ADJ JJ Degree=Pos _ _ _ _ 9 antagonism antagonism NOUN NN Number=Sing _ _ _ _ 10 between between ADP IN _ _ _ _ _ 11 VitD3 VitD3 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 RA Ra PROPN NNP Number=Sing _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 may may AUX MD VerbForm=Fin _ _ _ _ 16 have have VERB VB VerbForm=Inf _ _ _ _ 17 important important ADJ JJ Degree=Pos _ _ _ _ 18 implications implication NOUN NNS Number=Plur _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 regulation regulation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 certain certain ADJ JJ Degree=Pos _ _ _ _ 24 immune immune ADJ JJ Degree=Pos _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 27 responses response NOUN NNS Number=Plur _ _ _ _ 28 through through ADP IN _ _ _ _ _ 29 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 30 inverse inverse NOUN NN Number=Sing _ _ _ _ 31 effects effect NOUN NNS Number=Plur _ _ _ _ 32 on on ADP IN _ _ _ _ _ 33 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 14 14 NUM CD NumType=Card _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 CD23 CD23 NUM CD NumType=Card _ _ _ _ 37 gene gene NOUN NN Number=Sing _ _ _ _ 38 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11078 # text = Document 0030012433 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012433 0030012433 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11079 # text = Peripheral blood mononuclear cells isolated from patients with diabetic nephropathy show increased activation of the oxidative-stress sensitive transcription factor NF-kappaB. 1 Peripheral Peripheral ADJ JJ Degree=Pos _ _ _ _ 2 blood blood NOUN NN Number=Sing _ _ _ _ 3 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 patients patient NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 diabetic diabetic ADJ JJ Degree=Pos _ _ _ _ 10 nephropathy nephropathy ADJ JJ Degree=Pos _ _ _ _ 11 show show NOUN NN Number=Sing _ _ _ _ 12 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 oxidative oxidative ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 stress stress NOUN NN Number=Sing _ _ _ _ 19 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11080 # text = Increased oxidative stress and subsequent activation of the transcription factor NF-kappaB has been linked to the development of late diabetic complications. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 3 stress stress NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 14 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 16 linked link VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 development development NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 late late ADJ JJ Degree=Pos _ _ _ _ 22 diabetic diabetic ADJ JJ Degree=Pos _ _ _ _ 23 complications complication NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 11081 # text = To determine whether oxidative stress dependent NF-kappaB activation is evident in patients with diabetic nephropathy we used an Electrophoretic Mobility Shift Assay based semiquantitative detection system which enabled us to determine NF-kappaB activation in ex vivo isolated peripheral blood mononuclear cells. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 5 stress stress NOUN NN Number=Sing _ _ _ _ 6 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 evident evident ADJ JJ Degree=Pos _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 patients patient NOUN NNS Number=Plur _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 diabetic diabetic ADJ JJ Degree=Pos _ _ _ _ 17 nephropathy nephropathy NOUN NN Number=Sing _ _ _ _ 18 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 19 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 Electrophoretic Electrophoretic PROPN NNP Number=Sing _ _ _ _ 22 Mobility Mobility NOUN NN Number=Sing _ _ _ _ 23 Shift shift PROPN NNP Number=Sing _ _ _ _ 24 Assay assay PROPN NNP Number=Sing _ _ _ _ 25 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 semiquantitative semiquantitative ADJ JJ Degree=Pos _ _ _ _ 27 detection detection NOUN NN Number=Sing _ _ _ _ 28 system system NOUN NN Number=Sing _ _ _ _ 29 which which PRON WDT PronType=Rel _ _ _ _ 30 enabled enable VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 us we PRON PRP Case=Acc|Number=Plur|Person=1|PronType=Prs _ _ _ _ 32 to to PART TO _ _ _ _ _ 33 determine determine VERB VB VerbForm=Inf _ _ _ _ 34 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 37 activation activation NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 ex ex ADJ JJ Degree=Pos _ _ _ _ 40 vivo vivo NOUN NN Number=Sing _ _ _ _ 41 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 43 blood blood NOUN NN Number=Sing _ _ _ _ 44 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 45 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 11082 # text = We examined 33 patients with diabetes mellitus (Type I and 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 33 33 NUM CD NumType=Card _ _ _ _ 4 patients patient NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 diabetes diabete NOUN NNS Number=Plur _ _ _ _ 7 mellitus mellitus NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 Type type NOUN NN Number=Sing _ _ _ _ 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ # sent_id = 11083 # text = Type II). 1 Type type NOUN NN Number=Sing _ _ _ _ 2 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ _ # sent_id = 11084 # text = Patients with diabetic nephropathy showed higher NF-kappaB binding activity in Electrophoretic Mobility Shift Assays and stronger immunohistological staining for activated NF-kappaBp65 than patients without renal complications. 1 Patients patient NOUN NNS Number=Plur _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 diabetic diabetic ADJ JJ Degree=Pos _ _ _ _ 4 nephropathy nephropathy NOUN NN Number=Sing _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 higher higher ADJ JJR Degree=Cmp _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 binding bind VERB VBG VerbForm=Ger _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 Electrophoretic Electrophoretic PROPN NNP Number=Sing _ _ _ _ 14 Mobility Mobility PROPN NNP Number=Sing _ _ _ _ 15 Shift shift PROPN NNP Number=Sing _ _ _ _ 16 Assays Assays PROPN NNPS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 stronger stronger ADJ JJR Degree=Cmp _ _ _ _ 19 immunohistological immunohistological ADJ JJ Degree=Pos _ _ _ _ 20 staining staining VERB VBG VerbForm=Ger _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappaBp65 kappaBp65 PROPN NNP Number=Sing _ _ _ _ 26 than than ADP IN _ _ _ _ _ 27 patients patient NOUN NNS Number=Plur _ _ _ _ 28 without without ADP IN _ _ _ _ _ 29 renal renal ADJ JJ Degree=Pos _ _ _ _ 30 complications complication NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11085 # text = NF-kappaB binding activity correlated with the degree of albuminuria (r = 0.316) and with thrombomodulin plasma concentrations (r = 0.33), indicative for albuminuria associated endothelial dysfunction. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 degree degree NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 albuminuria albuminuria NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 r be NOUN NN Number=Sing _ _ _ _ 14 = = SYM SYM _ _ _ _ _ 15 0.316 0.316 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 thrombomodulin thrombomodulin NOUN NN Number=Sing _ _ _ _ 20 plasma plasma NOUN NN Number=Sing _ _ _ _ 21 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 r be NOUN NN Number=Sing _ _ _ _ 24 = = SYM SYM _ _ _ _ _ 25 0.33 0.33 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 indicative indicative ADJ JJ Degree=Pos _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 albuminuria albuminurion X GW _ _ _ _ _ 31 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 33 dysfunction dysfunction NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 11086 # text = In a 3 day intervention study in which 600 mg of the antioxidant thioctic acid (alpha-lipoic acid) per day were given to nine patients with diabetic nephropathy oxidative stress in plasma samples was decreased by 48% and NF-kappaB binding activity in ex vivo isolated peripheral blood mononuclear cells by 38%. 1 In in ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 3 3 NUM CD NumType=Card _ _ _ _ 4 day day NOUN NN Number=Sing _ _ _ _ 5 intervention intervention NOUN NN Number=Sing _ _ _ _ 6 study study NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 600 600 NUM CD NumType=Card _ _ _ _ 10 mg mg NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 antioxidant antioxidant ADJ JJ Degree=Pos _ _ _ _ 14 thioctic thioctic ADJ JJ Degree=Pos _ _ _ _ 15 acid acid NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 lipoic lipoic ADJ JJ Degree=Pos _ _ _ _ 20 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 per per ADP IN _ _ _ _ _ 23 day day NOUN NN Number=Sing _ _ _ _ 24 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 given give VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 nine nine NUM CD NumType=Card _ _ _ _ 28 patients patient NOUN NN Number=Sing _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 diabetic diabetic ADJ JJ Degree=Pos _ _ _ _ 31 nephropathy nephropathy NOUN NN Number=Sing _ _ _ _ 32 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 33 stress stress NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 plasma plasma NOUN NN Number=Sing _ _ _ _ 36 samples sample NOUN NNS Number=Plur _ _ _ _ 37 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 38 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 by by ADP IN _ _ _ _ _ 40 48 48 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 % % SYM NN Number=Sing _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 46 binding binding VERB VBG VerbForm=Ger _ _ _ _ 47 activity activity NOUN NN Number=Sing _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 ex ex ADJ JJ Degree=Pos _ _ _ _ 50 vivo vivo NOUN NN Number=Sing _ _ _ _ 51 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 52 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 53 blood blood NOUN NN Number=Sing _ _ _ _ 54 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 55 cells cell NOUN NNS Number=Plur _ _ _ _ 56 by by ADP IN _ _ _ _ _ 57 38% 38% SYM NN Number=Sing _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 11087 # text = In conclusion, activation of the transcription factor NF-kappaB in ex vivo isolated peripheral blood mononuclear cells of patients with diabetes mellitus correlates with the degree of diabetic nephropathy. 1 In in ADP IN _ _ _ _ _ 2 conclusion conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 ex ex NUM CD NumType=Card _ _ _ _ 14 vivo vivo NOUN NN Number=Sing _ _ _ _ 15 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 17 blood blood NOUN NN Number=Sing _ _ _ _ 18 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 patients patient NOUN NN Number=Sing _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 diabetes diabete NOUN NNS Number=Plur _ _ _ _ 24 mellitus mellitus CCONJ CC _ _ _ _ _ 25 correlates correlate NOUN NNS Number=Plur _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 degree degree NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 diabetic diabetic ADJ JJ Degree=Pos _ _ _ _ 31 nephropathy nephropathy NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 11088 # text = NF-kappaB activation is at least in part dependent on oxidative stress since thioctic acid (alpha-lipoic acid) reduced NF-kappaB binding activity. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 at at ADV RB _ _ _ _ _ 7 least least ADV RBS Degree=Sup _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 part part ADJ JJ Degree=Pos _ _ _ _ 10 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 13 stress stress NOUN NN Number=Sing _ _ _ _ 14 since since ADP IN _ _ _ _ _ 15 thioctic thioctic ADJ JJ Degree=Pos _ _ _ _ 16 acid acid NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 lipoic lipoic ADJ JJ Degree=Pos _ _ _ _ 21 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 27 binding binding VERB VBG VerbForm=Ger _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11089 # text = Document 0030012434 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012434 0030012434 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11090 # text = Oxidative stress suppresses transcription factor activities in stimulated lymphocytes. 1 Oxidative Oxidative ADJ JJ Degree=Pos _ _ _ _ 2 stress stress NOUN NN Number=Sing _ _ _ _ 3 suppresses suppress VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 activities activity NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 stimulated stimulated ADJ JJ Degree=Pos _ _ _ _ 9 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11091 # text = Effects of oxidative stress on stimulation-dependent signal transduction, leading to IL-2 expression, were studied. 1 Effects Effects NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 4 stress stress NOUN NN Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 9 signal signal NOUN NN Number=Sing _ _ _ _ 10 transduction transduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 leading lead VERB VBG VerbForm=Ger _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 11092 # text = Purified quiescent human blood T lymphocytes were subjected to: (i) acute exposure to hydrogen peroxide; (ii) chronic exposure to hydrogen peroxide; and (iii) acute exposure to ionizing radiation. 1 Purified Purify ADJ JJ Degree=Pos _ _ _ _ 2 quiescent quiescent ADJ JJ Degree=Pos _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 blood blood NOUN NN Number=Sing _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 subjected subject VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to ADP IN _ _ _ _ SpaceAfter=No 10 : : PUNCT : _ _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 i i X LS _ _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 acute acute ADJ JJ Degree=Pos _ _ _ _ 15 exposure exposure NOUN NN Number=Sing _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 hydrogen hydrogen VERB VB VerbForm=Inf _ _ _ _ 18 peroxide peroxide NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ; ; PUNCT , _ _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 ii ii X LS _ _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 24 exposure exposure NOUN NN Number=Sing _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 hydrogen hydrogen VERB VB VerbForm=Inf _ _ _ _ 27 peroxide peroxide NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ; ; PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 iii iii X LS _ _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 acute acute ADJ JJ Degree=Pos _ _ _ _ 34 exposure exposure NOUN NN Number=Sing _ _ _ _ 35 to to SCONJ IN _ _ _ _ _ 36 ionizing ionizing VERB VBG VerbForm=Ger _ _ _ _ 37 radiation radiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 11093 # text = The cells were then stimulated for 6 h. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 then then ADV RB PronType=Dem _ _ _ _ 5 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 6 6 NUM CD NumType=Card _ _ _ _ 8 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 11094 # text = DNA-binding activities (determined by the electrophoretic mobility shift assay) of three transcription factors: NFkappaB, AP-1 and NFAT, were abolished in the lymphocytes by all three modes of oxidative stress. 1 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 binding binding VERB VBG VerbForm=Ger _ _ _ _ 4 activities activity NOUN NNS Number=Plur _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 10 mobility mobility NOUN NN Number=Sing _ _ _ _ 11 shift shift NOUN NN Number=Sing _ _ _ _ 12 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 three three NUM CD NumType=Card _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 : : PUNCT : _ _ _ _ _ 19 NFkappaB Nfkappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 NFAT Nfat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 abolished abolish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 all all DET DT _ _ _ _ _ 34 three three NUM CD NumType=Card _ _ _ _ 35 modes mode NOUN NNS Number=Plur _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 38 stress stress NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 11095 # text = The lymphocytes exhibited lipid peroxidation only upon exposure to the lowest level of hydrogen peroxide used (20 microM). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 3 exhibited exhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 lipid lipid ADJ JJ Degree=Pos _ _ _ _ 5 peroxidation peroxidation NOUN NN Number=Sing _ _ _ _ 6 only only ADV RB _ _ _ _ _ 7 upon upon ADP IN _ _ _ _ _ 8 exposure exposure NOUN NN Number=Sing _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 lowest lowest ADJ JJS Degree=Sup _ _ _ _ 12 level level NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 hydrogen hydrogen NOUN NN Number=Sing _ _ _ _ 15 peroxide peroxide NOUN NN Number=Sing _ _ _ _ 16 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 20 20 NUM CD NumType=Card _ _ _ _ 19 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 11096 # text = All three modes of oxidative stress induced catalase activity in the lymphocytes. 1 All all DET DT _ _ _ _ _ 2 three three NUM CD NumType=Card _ _ _ _ 3 modes mode NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 6 stress stress NOUN NN Number=Sing _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 catalase catalase NOUN NN Number=Sing _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 11097 # text = The only exception was hydrogen peroxide at 20 microM, which did not induce catalase activity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 only only ADJ JJ Degree=Pos _ _ _ _ 3 exception exception NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 hydrogen hydrogen VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 peroxide peroxide ADV RB _ _ _ _ _ 7 at at ADP IN _ _ _ _ _ 8 20 20 NUM CD NumType=Card _ _ _ _ 9 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 induce induce VERB VB VerbForm=Inf _ _ _ _ 15 catalase catalase ADJ JJ Degree=Pos _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 11098 # text = We conclude that: (i) suppression of specific transcription factor functions can potentially serve as a marker of exposure to oxidative stress and its effects on human lymphocytes; (ii) lipid peroxidation is only detectable in human lymphocytes upon exposure to weak oxidative stress which does not induce catalase activity; (iii) therefore, transcription factor DNA-binding activities are more sensitive to oxidative stress than lipid peroxidation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 i i X LS _ _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 suppression suppression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 specific specific ADJ JJ Degree=Pos _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 functions function NOUN NNS Number=Plur _ _ _ _ 14 can can AUX MD VerbForm=Fin _ _ _ _ 15 potentially potentially ADV RB _ _ _ _ _ 16 serve serve VERB VB VerbForm=Inf _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 marker marker NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 exposure exposure NOUN NN Number=Sing _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 24 stress stress NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 27 effects effect NOUN NNS Number=Plur _ _ _ _ 28 on on ADP IN _ _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 ; ; PUNCT , _ _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 ii ii X LS _ _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 lipid lipid ADJ JJ Degree=Pos _ _ _ _ 36 peroxidation peroxidation NOUN NN Number=Sing _ _ _ _ 37 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 only only ADV RB _ _ _ _ _ 39 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 human human ADJ JJ Degree=Pos _ _ _ _ 42 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 43 upon upon ADP IN _ _ _ _ _ 44 exposure exposure NOUN NN Number=Sing _ _ _ _ 45 to to PART TO _ _ _ _ _ 46 weak weak VERB VB VerbForm=Inf _ _ _ _ 47 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 48 stress stress NOUN NN Number=Sing _ _ _ _ 49 which which PRON WDT PronType=Rel _ _ _ _ 50 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 51 not not PART RB _ _ _ _ _ 52 induce induce VERB VB VerbForm=Inf _ _ _ _ 53 catalase catalase NOUN NN Number=Sing _ _ _ _ 54 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 ; ; PUNCT , _ _ _ _ _ 56 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 57 iii iii X LS _ _ _ _ SpaceAfter=No 58 ) ) PUNCT -RRB- _ _ _ _ _ 59 therefore therefore ADV RB _ _ _ _ SpaceAfter=No 60 , , PUNCT , _ _ _ _ _ 61 transcription transcription NOUN NN Number=Sing _ _ _ _ 62 factor factor NOUN NN Number=Sing _ _ _ _ 63 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 64 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 65 binding binding VERB VBG VerbForm=Ger _ _ _ _ 66 activities activity NOUN NNS Number=Plur _ _ _ _ 67 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 68 more more ADV RBR _ _ _ _ _ 69 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 70 to to ADP IN _ _ _ _ _ 71 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 72 stress stress NOUN NN Number=Sing _ _ _ _ 73 than than ADP IN _ _ _ _ _ 74 lipid lipid ADJ JJ Degree=Pos _ _ _ _ 75 peroxidation peroxidation NOUN NN Number=Sing _ _ _ SpaceAfter=No 76 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11099 # text = Document 0030012440 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012440 0030012440 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11100 # text = Induction of NF-kappa B during monocyte differentiation is associated with activation of HIV-gene expression. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 during during ADP IN _ _ _ _ _ 8 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 9 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11101 # text = Cells of the monocyte-macrophage lineage are important targets of HIV infection. 1 Cells cell NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 7 lineage lineage NOUN NN Number=Sing _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 important important ADJ JJ Degree=Pos _ _ _ _ 10 targets target NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 HIV Hiv NOUN NN Number=Sing _ _ _ _ 13 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 11102 # text = We report here that the phenotypic differentiation of monocyte cell lines induced by phorbol esters or tumour necrosis factor alpha (TNF alpha) is associated with expression of nuclear factor kappa B (NF-kappa B). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 phenotypic phenotypic ADJ JJ Degree=Pos _ _ _ _ 7 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 lines line NOUN NNS Number=Plur _ _ _ _ 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 15 esters ester NOUN NNS Number=Plur _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 tumour tumour NOUN NN Number=Sing _ _ _ _ 18 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 alpha alpha NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 TNF Tnf NOUN NN Number=Sing _ _ _ _ 23 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 31 factor factor NOUN NN Number=Sing _ _ _ _ 32 kappa kappa NOUN NN Number=Sing _ _ _ _ 33 B b NOUN NN Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 kappa kappa NOUN NN Number=Sing _ _ _ _ 38 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 11103 # text = In parallel with such differentiation, HIV transcription, monitored using an HIV long terminal repeat reporter gene construct, is activated in such cells under the influence of enhanced NF-kappa B expression. 1 In in ADP IN _ _ _ _ _ 2 parallel parallel NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 such such ADJ JJ Degree=Pos _ _ _ _ 5 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 HIV HIV PROPN NNP Number=Sing _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 monitored monitor VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 using use VERB VBG VerbForm=Ger _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 HIV Hiv PROPN NNP Number=Sing _ _ _ _ 14 long long ADJ JJ Degree=Pos _ _ _ _ 15 terminal terminal NOUN NN Number=Sing _ _ _ _ 16 repeat repeat VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 17 reporter reporter NOUN NN Number=Sing _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 construct construct NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 such such ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 under under ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 influence influence NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappa kappa NOUN NN Number=Sing _ _ _ _ 34 B b NOUN NN Number=Sing _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 11104 # text = Also, in a promonocyte cell line chronically infected with HIV, NF-kappa B expression and HIV transcription were enhanced on stimulation with phorbol ester or TNF alpha. 1 Also also ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 promonocyte promonocyte NOUN NN Number=Sing _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 line line NOUN NN Number=Sing _ _ _ _ 8 chronically chronically ADV RB _ _ _ _ _ 9 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 HIV Hiv NOUN NN Number=Sing _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 on on ADP IN _ _ _ _ _ 24 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 27 ester ester NOUN NN Number=Sing _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 TNF Tnf PROPN NNP Number=Sing _ _ _ _ 30 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11105 # text = Thus, stimulation of monocyte cell lines by phorbol esters or TNF alpha induces cell differentiation and activates HIV transcription. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 lines line NOUN NNS Number=Plur _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 10 esters ester NOUN NNS Number=Plur _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 TNF TNF PROPN NNP Number=Sing _ _ _ _ 13 alpha alpha ADV RB _ _ _ _ _ 14 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 HIV HIV PROPN NNP Number=Sing _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 11106 # text = Such a process may have fundamental implications in AIDS pathogenesis in vivo and may be important in disease progression induced by opportunistic infections directly or indirectly involving macrophages. 1 Such such DET PDT _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 process process NOUN NN Number=Sing _ _ _ _ 4 may may AUX MD VerbForm=Fin _ _ _ _ 5 have have VERB VB VerbForm=Inf _ _ _ _ 6 fundamental fundamental ADJ JJ Degree=Pos _ _ _ _ 7 implications implication NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 AIDS aids NOUN NN Number=Sing _ _ _ _ 10 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 vivo vivo NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 important important ADJ JJ Degree=Pos _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 disease disease NOUN NN Number=Sing _ _ _ _ 19 progression progression NOUN NN Number=Sing _ _ _ _ 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 opportunistic opportunistic ADJ JJ Degree=Pos _ _ _ _ 23 infections infection NOUN NNS Number=Plur _ _ _ _ 24 directly directly ADV RB _ _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 indirectly indirectly ADV RB _ _ _ _ _ 27 involving involve VERB VBG VerbForm=Ger _ _ _ _ 28 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11107 # text = Document 0030012441 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012441 0030012441 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11108 # text = Hypoxia causes the activation of nuclear factor kappa B through the phosphorylation of I kappa B alpha on tyrosine residues. 1 Hypoxia Hypoxia PROPN NNP Number=Sing _ _ _ _ 2 causes cause VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 through through ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 15 kappa kappa X FW Foreign=Yes _ _ _ _ 16 B benefit ADJ JJ Degree=Pos _ _ _ _ 17 alpha alpha NOUN NN Number=Sing _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 20 residues residue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11109 # text = The response of mammalian cells to stress is controlled by transcriptional regulatory proteins such as nuclear factor kappa B (NF-kappa B) to induce a wide variety of early response genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 response response NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 stress stress NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 13 proteins protein NOUN NNS Number=Plur _ _ _ _ 14 such such ADJ JJ Degree=Pos _ _ _ _ 15 as as ADP IN _ _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa NOUN NN Number=Sing _ _ _ _ 24 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 induce induce VERB VB VerbForm=Inf _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 wide wide ADJ JJ Degree=Pos _ _ _ _ 30 variety variety NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 early early ADJ JJ Degree=Pos _ _ _ _ 33 response response NOUN NN Number=Sing _ _ _ _ 34 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 11110 # text = In this report, we show that exposure of cells to hypoxia (0.02% O2) results in I kappa B alpha degradation, increased NF-kappa B DNA binding activity, and transactivation of a reporter gene construct containing two NF-kappa B DNA binding sites. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 exposure exposure NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 hypoxia hypoxia NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 0.02 0.02 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 % % SYM NN Number=Sing _ _ _ _ 16 O2 O2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 results result NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 21 kappa kappa X GW _ _ _ _ _ 22 B b X GW _ _ _ _ _ 23 alpha alpha X GW _ _ _ _ _ 24 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ _ 31 DNA dna NOUN NN Number=Sing _ _ _ _ 32 binding binding VERB VBG VerbForm=Ger _ _ _ _ 33 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 reporter reporter NOUN NN Number=Sing _ _ _ _ 40 gene gene NOUN NN Number=Sing _ _ _ _ 41 construct construct NOUN NN Number=Sing _ _ _ _ 42 containing contain VERB VBG VerbForm=Ger _ _ _ _ 43 two two NUM CD NumType=Card _ _ _ _ 44 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 kappa kappa NOUN NN Number=Sing _ _ _ _ 47 B b NOUN NN Number=Sing _ _ _ _ 48 DNA dna NOUN NN Number=Sing _ _ _ _ 49 binding bind VERB VBG VerbForm=Ger _ _ _ _ 50 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 11111 # text = Pretreatment of cells with protein tyrosine kinase inhibitors and the dominant negative allele of c-Raf-1 (Raf 301) inhibited I kappa B alpha degradation, NF-kappa B binding, and transactivation of kappa B reporter constructs by hypoxia. 1 Pretreatment Pretreatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 12 negative negative ADJ JJ Degree=Pos _ _ _ _ 13 allele allele NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 Raf Raf NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 Raf Raf NOUN NN Number=Sing _ _ _ _ 22 301 301 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 26 kappa kappa X FW Foreign=Yes _ _ _ _ 27 B b ADJ JJ Degree=Pos _ _ _ _ 28 alpha alpha NOUN NN Number=Sing _ _ _ _ 29 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappa kappa NOUN NN Number=Sing _ _ _ _ 34 B b NOUN NN Number=Sing _ _ _ _ 35 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 kappa kappa NOUN NN Number=Sing _ _ _ _ 41 B b NOUN NN Number=Sing _ _ _ _ 42 reporter reporter NOUN NN Number=Sing _ _ _ _ 43 constructs construct NOUN NNS Number=Plur _ _ _ _ 44 by by ADP IN _ _ _ _ _ 45 hypoxia hypoxia NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 11112 # text = To demonstrate a direct link between changes in the phosphorylation pattern of I kappa B alpha with NF-kappa B activation, we immunoprecipitated I kappa B alpha after varying times of hypoxic exposure and found that its tyrosine phosphorylation status increased during hypoxic exposure. 1 To to PART TO _ _ _ _ _ 2 demonstrate demonstrate VERB VB VerbForm=Inf _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 direct direct ADJ JJ Degree=Pos _ _ _ _ 5 link link NOUN NN Number=Sing _ _ _ _ 6 between between ADP IN _ _ _ _ _ 7 changes change NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 11 pattern pattern NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 14 kappa kappa PROPN NNP Number=Sing _ _ _ _ 15 B b PROPN NNP Number=Sing _ _ _ _ 16 alpha alpha ADV RB _ _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 25 immunoprecipitated immunoprecipitate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 27 kappa kappa PROPN NNP Number=Sing _ _ _ _ 28 B b PROPN NNP Number=Sing _ _ _ _ 29 alpha alpha ADV RB _ _ _ _ _ 30 after after SCONJ IN _ _ _ _ _ 31 varying vary VERB VBG VerbForm=Ger _ _ _ _ 32 times time NOUN NNS Number=Plur _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 hypoxic hypoxic ADJ JJ Degree=Pos _ _ _ _ 35 exposure exposure NOUN NN Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 38 that that SCONJ IN _ _ _ _ _ 39 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 40 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 41 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 42 status status NOUN NN Number=Sing _ _ _ _ 43 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 during during ADP IN _ _ _ _ _ 45 hypoxic hypoxic ADJ JJ Degree=Pos _ _ _ _ 46 exposure exposure NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 11113 # text = Inhibition of the transfer of tyrosine phosphoryl groups onto I kappa B alpha prevented I kappa B alpha degradation and NF-kappa B binding. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 transfer transfer NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 7 phosphoryl phosphoryl NOUN NN Number=Sing _ _ _ _ 8 groups group NOUN NNS Number=Plur _ _ _ _ 9 onto onto ADP IN _ _ _ _ _ 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 kappa kappa PROPN NNP Number=Sing _ _ _ _ 12 B B PROPN NNP Number=Sing _ _ _ _ 13 alpha alpha ADV RB _ _ _ _ _ 14 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 kappa kappa PROPN NNP Number=Sing _ _ _ _ 17 B b PROPN NNP Number=Sing _ _ _ _ 18 alpha alpha ADP IN _ _ _ _ _ 19 degradation degradation NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa NOUN NN Number=Sing _ _ _ _ 24 B b NOUN NN Number=Sing _ _ _ _ 25 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11114 # text = In comparison to other activators of NF-kappa B such as phorbol myristate acetate or tumor necrosis factor, we did not detect changes in the tyrosine phosphorylation status of I kappa B alpha following treatment with either of these agents. 1 In in ADP IN _ _ _ _ _ 2 comparison comparison NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 other other ADJ JJ Degree=Pos _ _ _ _ 5 activators activator NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B b PROPN NNP Number=Sing _ _ _ _ 11 such such ADJ JJ Degree=Pos _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 14 myristate myristate NOUN NN Number=Sing _ _ _ _ 15 acetate acetate NOUN NN Number=Sing _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 tumor tumor NOUN NN Number=Sing _ _ _ _ 18 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 22 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 not not PART RB _ _ _ _ _ 24 detect detect VERB VB VerbForm=Inf _ _ _ _ 25 changes change NOUN NNS Number=Plur _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 29 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 30 status status NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 33 kappa kappa NOUN NN Number=Sing _ _ _ _ 34 B b NOUN NN Number=Sing _ _ _ _ 35 alpha alpha NOUN NN Number=Sing _ _ _ _ 36 following follow VERB VBG VerbForm=Ger _ _ _ _ 37 treatment treatment NOUN NN Number=Sing _ _ _ _ 38 with with ADP IN _ _ _ _ _ 39 either either CCONJ CC _ _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 42 agents agent NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 11115 # text = These results suggest that tyrosine phosphorylation of I kappa B alpha during hypoxia is an important proximal step which precedes its dissociation and degradation from NF-kappa B. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 tyrosine tyrosine PRON PRP _ _ _ _ _ 6 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b ADJ JJ Degree=Pos _ _ _ _ 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 during during ADP IN _ _ _ _ _ 13 hypoxia hypoxia NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 important important ADJ JJ Degree=Pos _ _ _ _ 17 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 18 step step NOUN NN Number=Sing _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 precedes precede VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 22 dissociation dissociation NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 degradation degradation NOUN NN Number=Sing _ _ _ _ 25 from from ADP IN _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa PROPN NNP Number=Sing _ _ _ _ 29 B. B. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11116 # text = Document 0030012443 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012443 0030012443 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11117 # text = A polymorphism that affects OCT-1 binding to the TNF promoter region is associated with severe malaria [see comments] 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 polymorphism polymorphism NOUN NN Number=Sing _ _ _ _ 3 that that PRON WDT PronType=Rel _ _ _ _ 4 affects affect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 OCT oct NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 TNF TNF PROPN NNP Number=Sing _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 region region NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 severe severe ADJ JJ Degree=Pos _ _ _ _ 18 malaria malaria NOUN NN Number=Sing _ _ _ _ 19 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 see see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 comments comment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 11118 # text = Genetic variation in cytokine promoter regions is postulated to influence susceptibility to infection, but the molecular mechanisms by which such polymorphisms might affect gene regulation are unknown. 1 Genetic genetic ADJ JJ Degree=Pos _ _ _ _ 2 variation variation NOUN NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 cytokine cytokine ADJ JJ Degree=Pos _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ _ 6 regions region NOUN NNS Number=Plur _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 postulated postulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 influence influence VERB VB VerbForm=Inf _ _ _ _ 11 susceptibility susceptibility NOUN NN Number=Sing _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 18 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 which which DET WDT PronType=Int _ _ _ _ 21 such such ADJ JJ Degree=Pos _ _ _ _ 22 polymorphisms polymorphism NOUN NNS Number=Plur _ _ _ _ 23 might might AUX MD VerbForm=Fin _ _ _ _ 24 affect affect VERB VB VerbForm=Inf _ _ _ _ 25 gene gene ADJ JJ Degree=Pos _ _ _ _ 26 regulation regulation NOUN NN Number=Sing _ _ _ _ 27 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 11119 # text = Through systematic DNA footprinting of the TNF (encoding tumour necrosis factor, TNF) promoter region, we have identified a single nucleotide polymorphism (SNP) that causes the helix-turn-helix transcription factor OCT-1 to bind to a novel region of complex protein-DNA interactions and alters gene expression in human monocytes. 1 Through through ADP IN _ _ _ _ _ 2 systematic systematic ADJ JJ Degree=Pos _ _ _ _ 3 DNA dna NOUN NN Number=Sing _ _ _ _ 4 footprinting footprinting NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 TNF Tnf NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 10 tumour tumour NUM CD NumType=Card _ _ _ _ 11 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 20 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 single single ADJ JJ Degree=Pos _ _ _ _ 24 nucleotide nucleotide NOUN NN Number=Sing _ _ _ _ 25 polymorphism polymorphism NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 SNP SNP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 that that PRON WDT PronType=Rel _ _ _ _ 30 causes cause VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 helix helix NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 turn turn NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 helix helix NOUN NN Number=Sing _ _ _ _ 37 transcription transcription NOUN NN Number=Sing _ _ _ _ 38 factor factor NOUN NN Number=Sing _ _ _ _ 39 OCT oct NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 1 1 NUM CD NumType=Card _ _ _ _ 42 to to PART TO _ _ _ _ _ 43 bind bind VERB VB VerbForm=Inf _ _ _ _ 44 to to ADP IN _ _ _ _ _ 45 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 46 novel novel NOUN NN Number=Sing _ _ _ _ 47 region region NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 complex complex ADJ JJ Degree=Pos _ _ _ _ 50 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 DNA dna NOUN NN Number=Sing _ _ _ _ 53 interactions interaction NOUN NNS Number=Plur _ _ _ _ 54 and and CCONJ CC _ _ _ _ _ 55 alters alter NOUN NNS Number=Plur _ _ _ _ 56 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 57 expression expression NOUN NN Number=Sing _ _ _ _ 58 in in ADP IN _ _ _ _ _ 59 human human ADJ JJ Degree=Pos _ _ _ _ 60 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ _ # sent_id = 11120 # text = The OCT-1-binding genotype, found in approximately 5% of Africans, is associated with fourfold increased susceptibility to cerebral malaria in large case-control studies of 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 OCT Oct NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 binding binding VERB VBG VerbForm=Ger _ _ _ _ 7 genotype genotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 approximately approximately ADV RB _ _ _ _ _ 12 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 % % SYM NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 Africans Africans PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 fourfold fourfold VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 susceptibility susceptibility NOUN NN Number=Sing _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 cerebral cerebral ADJ JJ Degree=Pos _ _ _ _ 25 malaria malarion NOUN NNS Number=Plur _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 large large ADJ JJ Degree=Pos _ _ _ _ 28 case case NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 control control NOUN NN Number=Sing _ _ _ _ 31 studies study NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ # sent_id = 11121 # text = West African and East African populations, after correction for other known TNF polymorphisms and linked HLA alleles. 1 West West PROPN NNP Number=Sing _ _ _ _ 2 African African PROPN NNP Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 East East PROPN NNP Number=Sing _ _ _ _ 5 African african ADJ JJ Degree=Pos _ _ _ _ 6 populations population NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 after after ADP IN _ _ _ _ _ 9 correction correction NOUN NN Number=Sing _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 other other ADJ JJ Degree=Pos _ _ _ _ 12 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 TNF Tnf ADP RP _ _ _ _ _ 14 polymorphisms polymorphism NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 linked link VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 HLA Hla PROPN NNP Number=Sing _ _ _ _ 18 alleles allele NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11122 # text = Document 0030012448 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012448 0030012448 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11123 # text = NF-kappaB activation is required for C5a-induced interleukin-8 gene expression in mononuclear cells. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 C5 C5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 a- a- PUNCT : _ _ _ _ SpaceAfter=No 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 8 8 NUM CD NumType=Card _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11124 # text = C5a, a potent peptide chemoattractant, stimulates interleukin-8 (IL-8) secretion from peripheral blood mononuclear cells (PBMC). 1 C5a C5a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 potent potent NOUN NN Number=Sing _ _ _ _ 5 peptide peptide NOUN NN Number=Sing _ _ _ _ 6 chemoattractant chemoattractant NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 stimulates stimulate NOUN NNS Number=Plur _ _ _ _ 9 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT : _ _ _ _ SpaceAfter=No 11 8 8 NUM CD NumType=Card _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 8 8 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 secretion secretion NOUN NN Number=Sing _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 20 blood blood NOUN NN Number=Sing _ _ _ _ 21 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 PBMC PBMC NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11125 # text = Experiments were conducted to understand the mechanisms for C5a-induced IL-8 production, which was 14-fold greater than that in unstimulated cells by 2 hours. 1 Experiments Experiment NOUN NNS Number=Plur _ _ _ _ 2 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 conducted conduct VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 understand understand VERB VB VerbForm=Inf _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 C5 C5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 a- a- PUNCT , _ _ _ _ SpaceAfter=No 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 8 8 NUM CD NumType=Card _ _ _ _ 15 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 14 14 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 fold fold VERB VB VerbForm=Inf _ _ _ _ 22 greater greater ADJ JJR Degree=Cmp _ _ _ _ 23 than than ADP IN _ _ _ _ _ 24 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 2 2 NUM CD NumType=Card _ _ _ _ 30 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11126 # text = IL-8 secretion was accompanied by accumulation of IL-8 mRNA in the cytosol and by nuclear expression of a kappaB DNA binding activity within 30 minutes. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 8 8 NUM CD NumType=Card _ _ _ _ 4 secretion secretion NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 8 8 NUM CD NumType=Card _ _ _ _ 13 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 24 DNA dna NOUN NN Number=Sing _ _ _ _ 25 binding binding VERB VBG VerbForm=Ger _ _ _ _ 26 activity activity NOUN NN Number=Sing _ _ _ _ 27 within within ADP IN _ _ _ _ _ 28 30 30 NUM CD NumType=Card _ _ _ _ 29 minutes minute NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 11127 # text = AP-1 but not NF-IL-6 DNA binding activity was also detected in C5a-stimulated PBMC; however, its delayed expression (maximal at 4 hours) suggested a less important role in the rapid production of IL-8. 1 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 but but CCONJ CC _ _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 6 6 NUM CD NumType=Card _ _ _ _ 11 DNA dna NOUN NN Number=Sing _ _ _ _ 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 also also ADV RB _ _ _ _ _ 16 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 C5 C5 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 a- a- PUNCT : _ _ _ _ SpaceAfter=No 20 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 PBMC Pbmc NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ; ; PUNCT , _ _ _ _ _ 23 however however ADV RB _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 26 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 delayed delay VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 31 at at ADP IN _ _ _ _ _ 32 4 4 NUM CD NumType=Card _ _ _ _ 33 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 less less ADJ JJR Degree=Cmp _ _ _ _ 38 important important ADJ JJ Degree=Pos _ _ _ _ 39 role role NOUN NN Number=Sing _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 43 production production NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 11128 # text = The correlation between C5a-induced kappaB binding activity and IL-8 gene expression was examined in the RAW264.7 macrophage cells using reporter genes directed by the kappaB sequence from IkappaBalpha and IL-8 promoter regions. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 correlation correlation NOUN NN Number=Sing _ _ _ _ 3 between between ADP IN _ _ _ _ _ 4 C5 C5 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 a- a- PUNCT : _ _ _ _ SpaceAfter=No 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 8 8 NUM CD NumType=Card _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 RAW RAW PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 264.7 264.7 NUM CD NumType=Card _ _ _ _ 22 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 using use VERB VBG VerbForm=Ger _ _ _ _ 25 reporter reporter NOUN NN Number=Sing _ _ _ _ 26 genes gene NOUN NNS Number=Plur _ _ _ _ 27 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 kappaB kappab PROPN NNP Number=Sing _ _ _ _ 31 sequence sequence NOUN NN Number=Sing _ _ _ _ 32 from from ADP IN _ _ _ _ _ 33 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 8 8 NUM CD NumType=Card _ _ _ _ 38 promoter promoter NOUN NN Number=Sing _ _ _ _ 39 regions region NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 11129 # text = C5a-induced reporter gene expression was abolished by introducing mutations into the kappaB sites and by coexpression of a dominant negative IkappaBalpha construct resistant to agonist-induced phosphorylation. 1 C5 C5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 a a DET DT Definite=Ind|PronType=Art _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 reporter reporter NOUN NN Number=Sing _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 abolished abolish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by SCONJ IN _ _ _ _ _ 11 introducing introduce VERB VBG VerbForm=Ger _ _ _ _ 12 mutations mutation NOUN NNS Number=Plur _ _ _ _ 13 into into ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 16 sites site NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 coexpression coexpression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 23 negative negative ADJ JJ Degree=Pos _ _ _ _ 24 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 25 construct construct ADJ JJ Degree=Pos _ _ _ _ 26 resistant resistant NOUN NN Number=Sing _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 agonist agonist VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 29 -induced -induce ADJ JJ Degree=Pos _ _ _ _ 30 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11130 # text = Pertussis toxin, which ADP-ribosylates the Gi proteins known to couple to the C5a receptor, produced minimal inhibition of C5a-induced IL-8 expression and had little effect on C5a-induced calcium mobilization in RAW264.7 cells. 1 Pertussis Pertussis PROPN NNP Number=Sing _ _ _ _ 2 toxin toxin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 which which DET WDT PronType=Int _ _ _ _ 5 ADP ADP NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 ribosylates ribosylate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 Gi gi PROPN NNP Number=Sing _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ _ 11 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 couple couple NOUN NN Number=Sing _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 C5 C5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 22 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 C5 C5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 a- a- PUNCT , _ _ _ _ SpaceAfter=No 26 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 8 8 NUM CD NumType=Card _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 33 little little ADJ JJ Degree=Pos _ _ _ _ 34 effect effect NOUN NN Number=Sing _ _ _ _ 35 on on ADP IN _ _ _ _ _ 36 C5 C5 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 a- a- PUNCT : _ _ _ _ SpaceAfter=No 38 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 calcium calcium NOUN NN Number=Sing _ _ _ _ 40 mobilization mobilization NOUN NN Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 RAW RAW PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 264.7 264.7 NUM CD NumType=Card _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 11131 # text = These results suggest that NF-kappaB activation is required for C5a-induced IL-8 gene expression and that this response is mediated primarily through a pertussis toxin-insensitive pathway. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 C5 C5 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 a- a- PUNCT : _ _ _ _ SpaceAfter=No 14 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 8 8 NUM CD NumType=Card _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 primarily primarily ADV RB _ _ _ _ _ 27 through through ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 pertussis pertussis NOUN NN Number=Sing _ _ _ _ 30 toxin toxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 insensitive insensitive ADJ JJ Degree=Pos _ _ _ _ 33 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11132 # text = Document 0030012461 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012461 0030012461 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11133 # text = CIITA-induced occupation of MHC class II promoters is independent of the cooperative stabilization of the promoter-bound multi-protein complexes. 1 CIITA CIITa NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 occupation occupation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 MHC MHC PROPN NNP Number=Sing _ _ _ _ 7 class class NOUN NN Number=Sing _ _ _ _ 8 II ii NUM CD NumType=Card _ _ _ _ 9 promoters promoter NOUN NNS Number=Plur _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 independent independent ADJ JJ Degree=Pos _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 cooperative cooperative ADJ JJ Degree=Pos _ _ _ _ 15 stabilization stabilization NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 bound bound ADJ JJ Degree=Pos _ _ _ _ 21 multi-protein multi-protein NOUN NN Number=Sing _ _ _ _ 22 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11134 # text = Precise regulation of MHC class II expression plays a crucial role in the control of the immune response. 1 Precise precise VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 MHC MHC PROPN NNP Number=Sing _ _ _ _ 5 class class NOUN NN Number=Sing _ _ _ _ 6 II ii NUM CD NumType=Card _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 control control NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 immune immune ADJ JJ Degree=Pos _ _ _ _ 18 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 11135 # text = The transactivator CIITA behaves as a master controller of constitutive and inducible MHC class II gene activation, but its exact mechanism of action is not known. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 3 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 4 behaves behave VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 master master NOUN NN Number=Sing _ _ _ _ 8 controller controller NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 13 MHC MHC PROPN NNP Number=Sing _ _ _ _ 14 class class NOUN NN Number=Sing _ _ _ _ 15 II ii NUM CD NumType=Card _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 21 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 exact exact ADV RB _ _ _ _ _ 23 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 action action NOUN NN Number=Sing _ _ _ _ 26 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 not not PART RB _ _ _ _ _ 28 known known ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 11136 # text = Activation of MHC class II promoters requires binding of at least three distinct multi-protein complexes (RFX, X2BP and NF-Y). 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 MHC MHC PROPN NNP Number=Sing _ _ _ _ 4 class class NOUN NN Number=Sing _ _ _ _ 5 II ii NUM CD NumType=Card _ _ _ _ 6 promoters promoter NOUN NNS Number=Plur _ _ _ _ 7 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 at at ADV RB _ _ _ _ _ 11 least least ADV RBS Degree=Sup _ _ _ _ 12 three three NUM CD NumType=Card _ _ _ _ 13 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 14 multi-protein multi-protein NOUN NN Number=Sing _ _ _ _ 15 complexes complex NOUN NNS Number=Plur _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 RFX RFX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 X2BP X2BP PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 Y y PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 11137 # text = It is known that the stability of this binding results from cooperative interactions between these proteins. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 stability stability NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 results result NOUN NNS Number=Plur _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 cooperative cooperative ADJ JJ Degree=Pos _ _ _ _ 13 interactions interaction NOUN NNS Number=Plur _ _ _ _ 14 between between ADP IN _ _ _ _ _ 15 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 16 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 11138 # text = We show here that expression of CIITA in MHC class II- cells triggers occupation of the promoters by these complexes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 MHC MHC PROPN NNP Number=Sing _ _ _ _ 10 class class NOUN NN Number=Sing _ _ _ _ 11 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 triggers trigger NOUN NNS Number=Plur _ _ _ _ 15 occupation occupation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 promoters promoter NOUN NNS Number=Plur _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 21 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 11139 # text = This observation raised the possibility that the effect of CIITA on promoter occupation is mediated by an effect on the cooperative stabilization of the DNA-bound multi-protein complexes. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 observation observation NOUN NN Number=Sing _ _ _ _ 3 raised raise VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 possibility possibility NOUN NN Number=Sing _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 effect effect NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 occupation occupation NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 effect effect NOUN NN Number=Sing _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 cooperative cooperative ADJ JJ Degree=Pos _ _ _ _ 22 stabilization stabilization NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 bound bound ADJ JJ Degree=Pos _ _ _ _ 28 multi-protein multi-protein NOUN NN Number=Sing _ _ _ _ 29 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 11140 # text = We show, however, that the presence of CIITA does not affect the stability of the higher-order protein complex formed on DNA by RFX, X2BP and NF-Y. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 however however ADV RB _ _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 presence presence NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 11 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 affect affect VERB VB VerbForm=Inf _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 stability stability NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 higher higher ADJ JJR Degree=Cmp _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 order order NOUN NN Number=Sing _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ _ 22 complex complex NOUN NN Number=Sing _ _ _ _ 23 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 DNA dna NOUN NN Number=Sing _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 RFX RFX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 X2BP X2BP PROPN NNP Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 Y y PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 11141 # text = This suggests other mechanisms for CIITA-induced promoter occupancy, such as an effect on chromatin structure leading to increased accessibility of MHC class II promoters. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 CIITA CIITA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 occupancy occupancy NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 such such ADJ JJ Degree=Pos _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 effect effect NOUN NN Number=Sing _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 18 structure structure NOUN NN Number=Sing _ _ _ _ 19 leading lead VERB VBG VerbForm=Ger _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 accessibility accessibility NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 MHC MHC PROPN NNP Number=Sing _ _ _ _ 25 class class NOUN NN Number=Sing _ _ _ _ 26 II ii NUM CD NumType=Card _ _ _ _ 27 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 11142 # text = This ability of CIITA to facilitate promoter occupation is undissociable from its transactivation potential. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 ability ability NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 facilitate facilitate VERB VB VerbForm=Inf _ _ _ _ 7 promoter promoter NOUN NN Number=Sing _ _ _ _ 8 occupation occupation NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 undissociable undissociable ADJ JJ Degree=Pos _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 14 potential potential NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 11143 # text = Finally, we conclude that this effect of CIITA is cell-type specific, since expression of CIITA is not required for normal occupation of MHC class II promoters in B lymphocytes. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 effect effect NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 type type NOUN NN Number=Sing _ _ _ _ 14 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 since since ADP IN _ _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 CIITA CIITA PROPN NNP Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 normal normal ADJ JJ Degree=Pos _ _ _ _ 25 occupation occupation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 MHC MHC PROPN NNP Number=Sing _ _ _ _ 28 class class NOUN NN Number=Sing _ _ _ _ 29 II ii NUM CD NumType=Card _ _ _ _ 30 promoters promoter NOUN NNS Number=Plur _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 B b ADJ JJ Degree=Pos _ _ _ _ 33 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11144 # text = Document 0030012465 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012465 0030012465 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11145 # text = Activation of distinct transcription factors in neutrophils by bacterial LPS, interferon-gamma, and GM-CSF and the necessity to overcome the action of endogenous proteases. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 factors factor NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 10 LPS Lps NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 CSF CSF PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 necessity necessity NOUN NN Number=Sing _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 overcome overcome VERB VB VerbForm=Inf _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 action action NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 29 proteases protease NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11146 # text = Human neutrophils can be induced to actively transcribe a number of early-response genes, in particular those encoding cytokines, chemokines, and the high-affinity surface receptor for IgG, FcgammaRI. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 3 can can AUX MD VerbForm=Fin _ _ _ _ 4 be be AUX VB VerbForm=Inf _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 actively actively ADV RB _ _ _ _ _ 8 transcribe transcribe VERB VB VerbForm=Inf _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 number number NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 early early ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 response response NOUN NN Number=Sing _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 particular particular ADJ JJ Degree=Pos _ _ _ _ 19 those those DET DT Number=Plur|PronType=Dem _ _ _ _ 20 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 21 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 chemokines chemokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 affinity affinity NOUN NN Number=Sing _ _ _ _ 30 surface surface NOUN NN Number=Sing _ _ _ _ 31 receptor receptor NOUN NN Number=Sing _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 IgG IgG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 FcgammaRI FcgammaRI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 11147 # text = Although little is known to date about the regulation of gene transcription in neutrophils, several indications point to a role for distinct transcription factors, such as members of the NF-kappaB and STAT families. 1 Although although SCONJ IN _ _ _ _ _ 2 little little ADJ JJ Degree=Pos _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 date date NOUN NN Number=Sing _ _ _ _ 7 about about ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 regulation regulation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 several several ADJ JJ Degree=Pos _ _ _ _ 17 indications indication NOUN NNS Number=Plur _ _ _ _ 18 point point VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 role role NOUN NN Number=Sing _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 such such ADJ JJ Degree=Pos _ _ _ _ 28 as as ADP IN _ _ _ _ _ 29 members member NOUN NNS Number=Plur _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 STAT Stat PROPN NNP Number=Sing _ _ _ _ 37 families family NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 11148 # text = In this study, we investigated whether these transcription factors become activated under stimulatory conditions which are known to induce gene transcription in neutrophils. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 whether whether SCONJ IN _ _ _ _ _ 8 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ _ 11 become become VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 under under ADP IN _ _ _ _ _ 14 stimulatory stimulatory ADJ JJ Degree=Pos _ _ _ _ 15 conditions condition NOUN NNS Number=Plur _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 induce induce VERB VB VerbForm=Inf _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 11149 # text = Unexpectedly, we found that conventional procedures employed to prepare cellular extracts cause the release of proteolytic activities that are normally stored in intracellular granules, resulting in the degradation of various NF-kappaB/Rel and STAT proteins. 1 Unexpectedly unexpectedly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 conventional conventional ADJ JJ Degree=Pos _ _ _ _ 7 procedures procedure NOUN NNS Number=Plur _ _ _ _ 8 employed employ VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 prepare prepare VERB VB VerbForm=Inf _ _ _ _ 11 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 12 extracts extract NOUN NNS Number=Plur _ _ _ _ 13 cause cause SCONJ IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 release release NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 proteolytic proteolytic ADJ JJ Degree=Pos _ _ _ _ 18 activities activity NOUN NNS Number=Plur _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 normally normally ADV RB _ _ _ _ _ 22 stored store VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 25 granules granule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 resulting result VERB VBG VerbForm=Ger _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 degradation degradation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 various various ADJ JJ Degree=Pos _ _ _ _ 33 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 37 Rel Rel PROPN NNP Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 40 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 11150 # text = To circumvent this problem, we developed an alternative procedure which allowed us to show that in neutrophils, LPS and TNFalpha induce a NF-kappaB DNA-binding activity which essentially consists of p50/RelA dimers, and that IFNgamma promotes the binding of STAT1 homodimers to the IFNgamma response region of the FcgammaRI promoter. 1 To to PART TO _ _ _ _ _ 2 circumvent circumvent VERB VB VerbForm=Inf _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 problem problem NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 developed develop VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 10 procedure procedure NOUN NN Number=Sing _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 allowed allow VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 us we PRON PRP Case=Acc|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 show show VERB VB VerbForm=Inf _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 LPS LPS PROPN NNP Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 23 induce induce VERB VB VerbForm=Inf _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 28 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 binding bind VERB VBG VerbForm=Ger _ _ _ _ 31 activity activity NOUN NN Number=Sing _ _ _ _ 32 which which PRON WDT PronType=Rel _ _ _ _ 33 essentially essentially ADV RB _ _ _ _ _ 34 consists consist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 p50/ p50ith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 37 RelA RelA NOUN NN Number=Sing _ _ _ _ 38 dimers dimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 that that SCONJ IN _ _ _ _ _ 42 IFNgamma IFNgamma PROPN NNP Number=Sing _ _ _ _ 43 promotes promote VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 binding binding NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 STAT1 STAT1 NUM CD NumType=Card _ _ _ _ 48 homodimers homodimer NOUN NNS Number=Plur _ _ _ _ 49 to to ADP IN _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 IFNgamma IFNgamma PROPN NNP Number=Sing _ _ _ _ 52 response response NOUN NN Number=Sing _ _ _ _ 53 region region NOUN NN Number=Sing _ _ _ _ 54 of of ADP IN _ _ _ _ _ 55 the the DET DT Definite=Def|PronType=Art _ _ _ _ 56 FcgammaRI FcgammaRI PROPN NNP Number=Sing _ _ _ _ 57 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 11151 # text = Moreover, we report that neutrophil stimulation with GM-CSF results in the formation of a STAT5-containing DNA-binding activity. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 7 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 CSF CSF PROPN NNP Number=Sing _ _ _ _ 12 results result NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 formation formation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 STAT5 STAT5 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 containing containing VERB VBG VerbForm=Ger _ _ _ _ 21 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 binding binding VERB VBG VerbForm=Ger _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 11152 # text = Collectively, the current findings open new perspectives about mechanisms that are likely to regulate gene transcription in neutrophils. 1 Collectively collectively ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 current current ADJ JJ Degree=Pos _ _ _ _ 5 findings finding NOUN NNS Number=Plur _ _ _ _ 6 open open ADJ JJ Degree=Pos _ _ _ _ 7 new new ADJ JJ Degree=Pos _ _ _ _ 8 perspectives perspective NOUN NNS Number=Plur _ _ _ _ 9 about about ADP IN _ _ _ _ _ 10 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 likely likely ADJ JJ Degree=Pos _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 11153 # text = In addition, the procedure described herein could prove useful in other cell types that express high levels of endogenous proteases. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 procedure procedure NOUN NN Number=Sing _ _ _ _ 6 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 herein herein ADV RB _ _ _ _ _ 8 could could AUX MD VerbForm=Fin _ _ _ _ 9 prove prove VERB VB VerbForm=Inf _ _ _ _ 10 useful useful ADJ JJ Degree=Pos _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 other other ADJ JJ Degree=Pos _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 types type NOUN NNS Number=Plur _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 high high ADJ JJ Degree=Pos _ _ _ _ 18 levels level NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 21 proteases protease NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11154 # text = Document 0030012472 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012472 0030012472 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11155 # text = Transcription of the hypersensitive site HS2 enhancer in erythroid cells. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 5 site site NOUN NN Number=Sing _ _ _ _ 6 HS2 Hs2 NUM CD NumType=Card _ _ _ _ 7 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11156 # text = In the human genome, the erythroid-specific hypersensitive site HS2 enhancer regulates the transcription of the downstream beta-like globin genes 10-50 kilobases away. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 genome genome NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 hypersensitive hypersensitive ADJ JJ Degree=Pos _ _ _ _ 11 site site NOUN NN Number=Sing _ _ _ _ 12 HS2 HS2 NUM CD NumType=Card _ _ _ _ 13 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 14 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 20 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 like like ADJ JJ Degree=Pos _ _ _ _ 23 globin globin NOUN NN Number=Sing _ _ _ _ 24 genes gene NOUN NNS Number=Plur _ _ _ _ 25 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - SYM SYM _ _ _ _ SpaceAfter=No 27 50 50 NUM CD NumType=Card _ _ _ _ 28 kilobases kilobase NOUN NNS Number=Plur _ _ _ _ 29 away away ADV RB _ _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 11157 # text = The mechanism of HS2 enhancer function is not known. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 HS2 HS2 NUM CD NumType=Card _ _ _ _ 5 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 6 function function NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 known known ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 11158 # text = The present study employs RNA protection assays to analyze the transcriptional status of the HS2 enhancer in transfected recombinant chloramphenicol acetyltransferase (CAT) plasmids. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 employs employ VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 RNA RNA DET DT Definite=Ind|PronType=Art _ _ _ _ 6 protection protection NOUN NN Number=Sing _ _ _ _ 7 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 analyze analyze VERB VB VerbForm=Inf _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 status status NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 HS2 Hs2 NOUN NN Number=Sing _ _ _ _ 16 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 recombinant recombinant NOUN NN Number=Sing _ _ _ _ 20 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 21 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 CAT cat NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 plasmids plasmid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11159 # text = In erythroid K562 cells in which the HS2 enhancer is active, the HS2 sequence directs the synthesis of long enhancer transcripts that are initiated apparently from within the enhancer and elongated through the intervening DNA into the cis-linked CAT gene. 1 In in ADP IN _ _ _ _ _ 2 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 3 K562 K562 NUM CD NumType=Card _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 HS2 Hs2 NOUN NN Number=Sing _ _ _ _ 9 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 active active ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 HS2 Hs2 NOUN NN Number=Sing _ _ _ _ 15 sequence sequence NOUN NN Number=Sing _ _ _ _ 16 directs direct VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 long long ADJ JJ Degree=Pos _ _ _ _ 21 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 22 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 23 that that PRON WDT PronType=Rel _ _ _ _ 24 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 initiated initiate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 apparently apparently ADV RB _ _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 within within ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 elongated elongate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 through through ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 intervening intervene VERB VBG VerbForm=Ger _ _ _ _ 36 DNA dna NOUN NN Number=Sing _ _ _ _ 37 into into ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 cis cis PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 40 -linked -link VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 41 CAT cat ADJ JJ Degree=Pos _ _ _ _ 42 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 11160 # text = In nonerythroid HL-60 cells in which the HS2 enhancer is inactive, long enhancer transcripts are not detectable. 1 In in ADP IN _ _ _ _ _ 2 nonerythroid nonerythroid ADJ JJ Degree=Pos _ _ _ _ 3 HL Hl NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 60 60 NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 HS2 Hs2 NOUN NN Number=Sing _ _ _ _ 11 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 inactive inactive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 long long ADJ JJ Degree=Pos _ _ _ _ 16 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 17 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 detectable detectable ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 11161 # text = Splitting the HS2 enhancer between two tandem Ap1 sites abolishes the synthesis of a group of long enhancer transcripts and results in loss of enhancer function and transcriptional silencing of the cis-linked CAT gene. 1 Splitting split VERB VBG VerbForm=Ger _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 HS2 Hs2 NOUN NN Number=Sing _ _ _ _ 4 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 5 between between ADP IN _ _ _ _ _ 6 two two NUM CD NumType=Card _ _ _ _ 7 tandem tandem NOUN NN Number=Sing _ _ _ _ 8 Ap1 Ap1 NUM CD NumType=Card _ _ _ _ 9 sites site NOUN NNS Number=Plur _ _ _ _ 10 abolishes abolish VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 group group NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 long long ADJ JJ Degree=Pos _ _ _ _ 18 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 19 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 results result NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 loss loss NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 26 function function NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 29 silencing silencing NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 cis cis PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 33 -linked -link VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 CAT cat ADJ JJ Degree=Pos _ _ _ _ 35 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 11162 # text = In directing the synthesis of RNA through the intervening DNA and the gene by a tracking and transcription mechanism, the HS2 enhancer may (i) open up the chromatin structure of a gene domain and (ii) deliver enhancer binding proteins to the promoter sequence where they may stimulate the transcription of the gene at the cap site. 1 In in SCONJ IN _ _ _ _ _ 2 directing direct VERB VBG VerbForm=Ger _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 RNA RNA PROPN NNP Number=Sing _ _ _ _ 7 through through ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 intervening intervening VERB VBG VerbForm=Ger _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 tracking tracking NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 HS2 Hs2 NOUN NN Number=Sing _ _ _ _ 23 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 24 may may AUX MD VerbForm=Fin _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 i i X LS _ _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 open open VERB VB VerbForm=Inf _ _ _ _ 29 up up ADP RP _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 32 structure structure NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 gene gene NOUN NN Number=Sing _ _ _ _ 36 domain domain NOUN NN Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 ii ii X LS _ _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 deliver deliver NOUN NN Number=Sing _ _ _ _ 42 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 43 binding bind VERB VBG VerbForm=Ger _ _ _ _ 44 proteins protein NOUN NNS Number=Plur _ _ _ _ 45 to to ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 promoter promoter NOUN NN Number=Sing _ _ _ _ 48 sequence sequence NOUN NN Number=Sing _ _ _ _ 49 where where ADV WRB PronType=Rel _ _ _ _ 50 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 51 may may AUX MD VerbForm=Fin _ _ _ _ 52 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 53 the the DET DT Definite=Def|PronType=Art _ _ _ _ 54 transcription transcription NOUN NN Number=Sing _ _ _ _ 55 of of ADP IN _ _ _ _ _ 56 the the DET DT Definite=Def|PronType=Art _ _ _ _ 57 gene gene NOUN NN Number=Sing _ _ _ _ 58 at at ADP IN _ _ _ _ _ 59 the the DET DT Definite=Def|PronType=Art _ _ _ _ 60 cap cap NOUN NN Number=Sing _ _ _ _ 61 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 62 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11163 # text = Document 0030012485 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012485 0030012485 NUM CD NumType=Card _ _ _ _ 3 ends. ends. NOUN NN Number=Sing _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11164 # text = Low CD3+CD28-induced interleukin-2 production correlates with decreased reactive oxygen intermediate formation in neonatal T cells. 1 Low low ADV RB Degree=Pos _ _ _ _ 2 CD3+CD28-induced CD3+CD28-induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 production production NOUN NN Number=Sing _ _ _ _ 7 correlates correlate NOUN NNS Number=Plur _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 11 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 12 intermediate intermediate ADJ JJ Degree=Pos _ _ _ _ 13 formation formation NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 16 T T PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11165 # text = The capacity of neonatal T cells to secrete interleukin-2 (IL-2) has been reported to be variable. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 capacity capacity NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 secrete secrete VERB VB VerbForm=Inf _ _ _ _ 9 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 X LS _ _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 19 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 variable variable ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 11166 # text = We analysed IL-2 production in purified neonatal and adult T cells using polyclonal activator phorbol ester + calcium ionophore (PDBu + iono) or receptor-mediated anti-CD3/anti-CD3+ anti-CD28 stimulation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 analysed analyse VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 production production NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 purified purified ADJ JJ Degree=Pos _ _ _ _ 9 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 adult adult ADJ JJ Degree=Pos _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 using use VERB VBG VerbForm=Ger _ _ _ _ 15 polyclonal polyclonal ADJ JJ Degree=Pos _ _ _ _ 16 activator activator NOUN NN Number=Sing _ _ _ _ 17 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 18 ester ester NOUN NN Number=Sing _ _ _ _ 19 + + SYM SYM _ _ _ _ _ 20 calcium calcium NOUN NN Number=Sing _ _ _ _ 21 ionophore ionophore NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 PDBu PDBu NOUN NN Number=Sing _ _ _ _ 24 + + SYM SYM _ _ _ _ _ 25 iono iono NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 receptor- receptor- SYM NFP _ _ _ _ SpaceAfter=No 29 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 anti-CD3/anti-CD3+ anti-CD3/anti-CD3+ SYM SYM _ _ _ _ _ 31 anti-CD28 anti-CD28 NUM CD NumType=Card _ _ _ _ 32 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 11167 # text = PDBu + iono induced equally high IL-2 levels in both groups and, when stimulated with plate-bound anti-CD3 monoclonal antibody (mAb), the IL-2 secretion by neonatal cells was undetectable and adult cells produced low amounts of IL-2 (mean 331 +/- 86 pg/ml). 1 PDBu PDBu PROPN NNP Number=Sing _ _ _ _ 2 + + SYM SYM _ _ _ _ _ 3 iono iono ADV RB _ _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 equally equally ADV RB _ _ _ _ _ 6 high high ADJ JJ Degree=Pos _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 levels level NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 both both DET DT _ _ _ _ _ 13 groups group NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 when when ADV WRB PronType=Int _ _ _ _ 17 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 plate plate NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 -bound -bound NOUN NN Number=Sing _ _ _ _ 21 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 22 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 23 antibody antibody NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 mAb mAb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ _ 32 secretion secretion NOUN NN Number=Sing _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ _ 36 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 37 undetectable undetectable ADJ JJ Degree=Pos _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 adult adult ADJ JJ Degree=Pos _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ _ 41 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 low low ADJ JJ Degree=Pos _ _ _ _ 43 amounts amount NOUN NNS Number=Plur _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 2 2 NUM CD NumType=Card _ _ _ _ 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 mean mean VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 50 331 331 NUM CD NumType=Card _ _ _ _ 51 +/- +/- SYM SYM _ _ _ _ _ 52 86 86 NUM CD NumType=Card _ _ _ _ 53 pg/ml pg/ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 11168 # text = The addition of anti-CD28 mAb to anti-CD3-stimulated cells markedly increased IL-2 production in both cell types, but levels of IL-2 in neonatal T cells remained clearly lower than those of adult T cells (respective mean values: 385 +/- 109 pg/ml and 4494 +/- 1199 pg/ml). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 anti-CD28 anti-CD28 NUM CD NumType=Card _ _ _ _ 5 mAb mAb PROPN NNP Number=Sing _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 -stimulated -stimulated ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 markedly markedly ADV RB _ _ _ _ _ 11 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 production production NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 both both DET DT _ _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 but but CCONJ CC _ _ _ _ _ 22 levels level NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 29 T T PROPN NNP Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 clearly clearly ADV RB _ _ _ _ _ 33 lower lower ADJ JJR Degree=Cmp _ _ _ _ 34 than than ADP IN _ _ _ _ _ 35 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 adult adult ADJ JJ Degree=Pos _ _ _ _ 38 T t PROPN NNP Number=Sing _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 respective respective ADJ JJ Degree=Pos _ _ _ _ 42 mean mean NOUN NN Number=Sing _ _ _ _ 43 values value NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 : : PUNCT : _ _ _ _ _ 45 385 385 NUM CD NumType=Card _ _ _ _ 46 +/- +/- SYM SYM _ _ _ _ _ 47 109 109 NUM CD NumType=Card _ _ _ _ 48 pg/ml pg/ml NOUN NN Number=Sing _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 4494 4494 NUM CD NumType=Card _ _ _ _ 51 +/- +/- SYM SYM _ _ _ _ _ 52 1199 1199 NUM CD NumType=Card _ _ _ _ 53 pg/ml pg/ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 11169 # text = As NF-kappa B is a critical transcription factor in the control of IL-2 expression, we next analysed its nuclear translocation in neonatal and adult T cells using the electrophoretic mobility shift assay and, because induction of reactive oxygen intermediates (ROI) is required for the activation of NF-kappa B, we also analysed levels of intracellular ROI in these cells using the ROI-reactive fluorochrome DCFH-DA and flow cytometry. 1 As as ADP IN _ _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa PROPN NNP Number=Sing _ _ _ _ 5 B b PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 critical critical ADJ JJ Degree=Pos _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 control control NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 21 next next ADV RB _ _ _ _ _ 22 analysed analyse VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 25 translocation translocation NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 adult adult ADJ JJ Degree=Pos _ _ _ _ 30 T t PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 using use VERB VBG VerbForm=Ger _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 35 mobility mobility NOUN NN Number=Sing _ _ _ _ 36 shift shift NOUN NN Number=Sing _ _ _ _ 37 assay assay NOUN NN Number=Sing _ _ _ _ 38 and and CCONJ CC _ _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 because because SCONJ IN _ _ _ _ _ 41 induction induction NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 44 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 45 intermediates intermediate NOUN NNS Number=Plur _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 ROI ROI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ _ 49 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 50 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 51 for for ADP IN _ _ _ _ _ 52 the the DET DT Definite=Def|PronType=Art _ _ _ _ 53 activation activation NOUN NN Number=Sing _ _ _ _ 54 of of ADP IN _ _ _ _ _ 55 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 56 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 57 kappa kappa PROPN NNP Number=Sing _ _ _ _ 58 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 59 , , PUNCT , _ _ _ _ _ 60 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 61 also also ADV RB _ _ _ _ _ 62 analysed analyse VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 63 levels level NOUN NNS Number=Plur _ _ _ _ 64 of of ADP IN _ _ _ _ _ 65 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 66 ROI ROI NOUN NNS Number=Plur _ _ _ _ 67 in in ADP IN _ _ _ _ _ 68 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 69 cells cell NOUN NNS Number=Plur _ _ _ _ 70 using use VERB VBG VerbForm=Ger _ _ _ _ 71 the the DET DT Definite=Def|PronType=Art _ _ _ _ 72 ROI ROI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 73 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 74 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 75 fluorochrome fluorochrome NOUN NN Number=Sing _ _ _ _ 76 DCFH DCFh NOUN NN Number=Sing _ _ _ SpaceAfter=No 77 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 78 DA da NOUN NN Number=Sing _ _ _ _ 79 and and CCONJ CC _ _ _ _ _ 80 flow flow NOUN NN Number=Sing _ _ _ _ 81 cytometry cytometry NOUN NN Number=Sing _ _ _ SpaceAfter=No 82 . . PUNCT . _ _ _ _ _ # sent_id = 11170 # text = In neonatal T cells NF-kappa B activation and ROI formation after anti-CD3 stimulation were low compared with adult T cells and, although addition of anti-CD28 mAb increased induction of NF-kappa B and ROI formation, levels similar to those of adults were not achieved. 1 In in ADP IN _ _ _ _ _ 2 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 ROI Roi NOUN NN Number=Sing _ _ _ _ 12 formation formation NOUN NN Number=Sing _ _ _ _ 13 after after ADP IN _ _ _ _ _ 14 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 15 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 low low ADJ JJ Degree=Pos _ _ _ _ 18 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 adult adult NOUN NN Number=Sing _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 although although SCONJ IN _ _ _ _ _ 26 addition addition NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 anti-CD28 anti-CD28 NUM CD NumType=Card _ _ _ _ 29 mAb mAb PROPN NNP Number=Sing _ _ _ _ 30 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 induction induction NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 kappa kappa PROPN NNP Number=Sing _ _ _ _ 36 B b PROPN NNP Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 ROI Roi PROPN NNP Number=Sing _ _ _ _ 39 formation formation NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 levels level NOUN NNS Number=Plur _ _ _ _ 42 similar similar ADJ JJ Degree=Pos _ _ _ _ 43 to to ADP IN _ _ _ _ _ 44 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 adults adult NOUN NNS Number=Plur _ _ _ _ 47 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 48 not not PART RB _ _ _ _ _ 49 achieved achieve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 11171 # text = After PDBu + iono stimulation, the cells showed similar ROI formation and IL-2 secretion. 1 After after SCONJ IN _ _ _ _ _ 2 PDBu PDBu PROPN NNP Number=Sing _ _ _ _ 3 + + SYM SYM _ _ _ _ _ 4 iono iono ADJ JJ Degree=Pos _ _ _ _ 5 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 similar similar ADJ JJ Degree=Pos _ _ _ _ 11 ROI Roi NOUN NN Number=Sing _ _ _ _ 12 formation formation NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 secretion secretion NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 11172 # text = Our results suggest that reduced IL-2 production by neonatal T cells is specific for anti-CD3 and anti-CD3+ anti-CD28-mediated stimulation and that these activators cannot effectively activate the ROI-NF-kappa B signalling pathway in neonatal T cells. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 production production NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 specific specific ADJ JJ Degree=Pos _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 + + SYM SYM _ _ _ _ _ 21 anti-CD28 anti-CD28 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 -mediated -mediated ADJ JJ Degree=Pos _ _ _ _ 23 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 27 activators activator NOUN NNS Number=Plur _ _ _ _ 28 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 29 not not PART RB _ _ _ _ _ 30 effectively effectively ADV RB _ _ _ _ _ 31 activate activate VERB VB VerbForm=Inf _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 ROI Roi NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 kappa kappa NOUN NN Number=Sing _ _ _ _ 38 B b NOUN NN Number=Sing _ _ _ _ 39 signalling signall VERB VBG VerbForm=Ger _ _ _ _ 40 pathway pathway NOUN NN Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 43 T t PROPN NNP Number=Sing _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11173 # text = Document 0030012490 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012490 0030012490 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11174 # text = Control of NFATx1 nuclear translocation by a calcineurin-regulated inhibitory domain. 1 Control Control NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NFATx1 NFATx1 NUM CD NumType=Card _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 translocation translocation NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 calcineurin- calcineurin- SYM SYM _ _ _ _ SpaceAfter=No 9 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 11 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11175 # text = The nuclear factor of activated T cells (NFAT) regulates cytokine gene expression in T cells through cis-acting elements located in the promoters of several cytokine genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 T T PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 cytokine cytokine PRON PRP _ _ _ _ _ 13 gene gene ADJ JJ Degree=Pos _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 through through ADP IN _ _ _ _ _ 19 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 acting acting VERB VBG VerbForm=Ger _ _ _ _ 22 elements element NOUN NNS Number=Plur _ _ _ _ 23 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 promoters promoter NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 several several ADJ JJ Degree=Pos _ _ _ _ 29 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 30 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11176 # text = NFATx1, which is preferentially expressed in the thymus and peripheral blood leukocytes, is one of four members of the NFAT family of transcription factors. 1 NFATx1 NFATx1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 which which PRON WDT PronType=Rel _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 preferentially preferentially ADV RB _ _ _ _ _ 6 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 thymus thymus NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 12 blood blood NOUN NN Number=Sing _ _ _ _ 13 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 one one NUM CD NumType=Card _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 four four NUM CD NumType=Card _ _ _ _ 19 members member NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 23 family family NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 11177 # text = We have performed domain analysis of NFATx1 by examining the effects of deletion mutations. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 performed perform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 domain domain ADJ JJ Degree=Pos _ _ _ _ 5 analysis analysis NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NFATx1 NFATx1 PROPN NNP Number=Sing _ _ _ _ 8 by by SCONJ IN _ _ _ _ _ 9 examining examine VERB VBG VerbForm=Ger _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 effects effect NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 deletion deletion NOUN NN Number=Sing _ _ _ _ 14 mutations mutation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 11178 # text = We found that NFATx1 DNA binding activity and interaction with AP-1 polypeptides were dependent on its central Rel similarity region and that transcriptional activation was reduced by deletions of either its N-terminal domain or its C-terminal domain, suggesting the presence of intrinsic transcriptional activation motifs in both regions. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 NFATx1 NFATx1 PROPN NNP Number=Sing _ _ _ _ 5 DNA Dna NOUN NN Number=Sing _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 interaction interaction NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 polypeptides polypeptide NOUN NNS Number=Plur _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 central central ADJ JJ Degree=Pos _ _ _ _ 20 Rel Rel NOUN NN Number=Sing _ _ _ _ 21 similarity similarity NOUN NN Number=Sing _ _ _ _ 22 region region NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 25 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 28 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 deletions deletion NOUN NNS Number=Plur _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 either either CCONJ CC _ _ _ _ _ 33 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 34 N- N- SYM NFP _ _ _ _ SpaceAfter=No 35 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 36 domain domain NOUN NN Number=Sing _ _ _ _ 37 or or CCONJ CC _ _ _ _ _ 38 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 39 C- C- NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 41 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 presence presence NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 intrinsic intrinsic ADJ JJ Degree=Pos _ _ _ _ 48 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 49 activation activation NOUN NN Number=Sing _ _ _ _ 50 motifs motif NOUN NNS Number=Plur _ _ _ _ 51 in in ADP IN _ _ _ _ _ 52 both both DET DT _ _ _ _ _ 53 regions region NOUN NNS Number=Plur _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 11179 # text = We also identified a potent inhibitory sequence within its N-terminal domain. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 potent potent NOUN NN Number=Sing _ _ _ _ 6 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 7 sequence sequence NOUN NN Number=Sing _ _ _ _ 8 within within ADP IN _ _ _ _ _ 9 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 10 N- N- PUNCT : _ _ _ _ SpaceAfter=No 11 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 12 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 11180 # text = We show that the inactivation of the inhibition was dependent on the activity of calcineurin, a calcium-calmodulin-dependent phosphatase. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 inactivation inactivation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 calcium-calmodulin calcium-calmodulin NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 21 phosphatase phosphatase NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 11181 # text = We also show that calcineurin associated with the N-terminal domain of NFATx1 at multiple docking sites and caused a reduction of size, indicative of dephosphorylation, in NFATx1. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 6 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 N- n- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 terminal terminal NOUN NN Number=Sing _ _ _ _ 11 domain domain NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NFATx1 Nfatx1 PROPN NNP Number=Sing _ _ _ _ 14 at at ADP IN _ _ _ _ _ 15 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 16 docking docking NOUN NN Number=Sing _ _ _ _ 17 sites site NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 reduction reduction NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 size size NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 indicative indicative NUM CD NumType=Card _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 dephosphorylation dephosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ATx1 ATx1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 11182 # text = We have mapped the inhibitory activity to less than 60 residues, containing motifs that are conserved in all NFAT proteins. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 mapped map VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 less less VERB VB VerbForm=Inf _ _ _ _ 9 than than ADP IN _ _ _ _ _ 10 60 60 NUM CD NumType=Card _ _ _ _ 11 residues residue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 containing contain VERB VBG VerbForm=Ger _ _ _ _ 14 motifs motif NOUN NNS Number=Plur _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 conserved conserve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 all all DET DT _ _ _ _ _ 20 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 21 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 11183 # text = Finally, we demonstrate that deletion in NFATx1 of the mapped 60 residues leads to its nuclear translocation independent of calcium signaling. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 deletion deletion NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 NFATx1 NFATx1 NUM CD NumType=Card _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 mapped map ADJ JJ Degree=Pos _ _ _ _ 12 60 60 NUM CD NumType=Card _ _ _ _ 13 residues residue NOUN NNS Number=Plur _ _ _ _ 14 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 translocation translocation NOUN NN Number=Sing _ _ _ _ 19 independent independent ADJ JJ Degree=Pos _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 calcium calcium NOUN NN Number=Sing _ _ _ _ 22 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 11184 # text = Our results support the model proposing that the N-terminal domain confers calcium-signaling dependence on NFATx1 transactivation activity by regulating its intracellular localization through a protein module that associates with calcineurin and is a target of its phosphatase activity. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 support support VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 model model NOUN NN Number=Sing _ _ _ _ 6 proposing propose VERB VBG VerbForm=Ger _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 N- n- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 terminal terminal NOUN NN Number=Sing _ _ _ _ 11 domain domain NOUN NN Number=Sing _ _ _ _ 12 confers confer NOUN NNS Number=Plur _ _ _ _ 13 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 signaling signaling NOUN NN Number=Sing _ _ _ _ 16 dependence dependence NOUN NN Number=Sing _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 NFATx1 NFATx1 NUM CD NumType=Card _ _ _ _ 19 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 by by SCONJ IN _ _ _ _ _ 22 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 23 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 25 localization localization NOUN NN Number=Sing _ _ _ _ 26 through through ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 protein protein NOUN NN Number=Sing _ _ _ _ 29 module module NOUN NN Number=Sing _ _ _ _ 30 that that PRON WDT PronType=Rel _ _ _ _ 31 associates associate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 target target NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 40 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 41 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11185 # text = Document 0030012492 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012492 0030012492 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11186 # text = Precise alignment of sites required for mu enhancer activation in B cells. 1 Precise precise NOUN NN Number=Sing _ _ _ _ 2 alignment alignment NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 sites site NOUN NNS Number=Plur _ _ _ _ 5 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 mu mu NOUN NN Number=Sing _ _ _ _ 8 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 B b ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11187 # text = The lymphocyte-specific immunoglobulin mu heavy-chain gene intronic enhancer is regulated by multiple nuclear factors. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 6 mu mu NOUN NN Number=Sing _ _ _ _ 7 heavy heavy ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 -chain -chain ADJ JJ Degree=Pos _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 intronic intronic ADJ JJ Degree=Pos _ _ _ _ 11 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 11188 # text = The previously defined minimal enhancer containing the muA, muE3, and muB sites is transactivated by a combination of the ETS-domain proteins PU.1 and Ets-1 in nonlymphoid cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 previously previously ADV RB _ _ _ _ _ 3 defined define VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 5 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 6 containing contain VERB VBG VerbForm=Ger _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 muA mua NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 muE3 muE3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 muB mub NOUN NN Number=Sing _ _ _ _ 14 sites site NOUN NNS Number=Plur _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 transactivated transactivate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 combination combination NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 ETS Et NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 domain domain NOUN NN Number=Sing _ _ _ _ 25 proteins protein NOUN NNS Number=Plur _ _ _ _ 26 PU.1 PU.1 NUM CD NumType=Card _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 Ets Ets NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 nonlymphoid nonlymphoid ADJ JJ Degree=Pos _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 11189 # text = The core GGAAs of the muA and muB sites are separated by 30 nucleotides, suggesting that ETS proteins bind to these sites from these same side of the DNA helix. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 core core NOUN NN Number=Sing _ _ _ _ 3 GGAAs GGAA NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 muA mua NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 muB mub NOUN NN Number=Sing _ _ _ _ 9 sites site NOUN NNS Number=Plur _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 separated separate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 30 30 NUM CD NumType=Card _ _ _ _ 14 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 ETS Ets NOUN NN Number=Sing _ _ _ _ 19 proteins proteins NOUN NNS Number=Plur _ _ _ _ 20 bind bind ADP IN _ _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 23 sites site NOUN NNS Number=Plur _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 26 same same ADJ JJ Degree=Pos _ _ _ _ 27 side side NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 DNA dna NOUN NN Number=Sing _ _ _ _ 31 helix helix NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 11190 # text = We tested the necessity for appropriate spatial alignment of these elements by using mutated enhancers with altered spacings. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 tested test VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 necessity necessity NOUN NN Number=Sing _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 appropriate appropriate ADJ JJ Degree=Pos _ _ _ _ 7 spatial spatial ADJ JJ Degree=Pos _ _ _ _ 8 alignment alignment NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 elements element NOUN NNS Number=Plur _ _ _ _ 12 by by SCONJ IN _ _ _ _ _ 13 using use VERB VBG VerbForm=Ger _ _ _ _ 14 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 enhancers enhancer NOUN NNS Number=Plur _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 altered alter VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 spacings spacing NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 11191 # text = A 4- or 10-bp insertion between muE3 and muB inactivated the mu enhancer in S194 plasma cells but did not affect in vitro binding of Ets-1, PU.1, or the muE3-binding protein TFE3, alone or in pairwise combinations. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ _ 4 or or CCONJ CC _ _ _ _ _ 5 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 bp bp NOUN NN Number=Sing _ _ _ _ 8 insertion insertion NOUN NN Number=Sing _ _ _ _ 9 between between ADP IN _ _ _ _ _ 10 muE3 muE3 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 muB muB PROPN NNP Number=Sing _ _ _ _ 13 inactivated inactivate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 mu mu NOUN NN Number=Sing _ _ _ _ 16 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 S194 S194 NUM CD NumType=Card _ _ _ _ 19 plasma plasma NOUN NN Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 but but CCONJ CC _ _ _ _ _ 22 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 not not PART RB _ _ _ _ _ 24 affect affect VERB VB VerbForm=Inf _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 vitro vitro NOUN NN Number=Sing _ _ _ _ 27 binding binding VERB VBG VerbForm=Ger _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 Ets ets PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 30 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 or or CCONJ CC _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 muE3 muE3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 binding bind VERB VBG VerbForm=Ger _ _ _ _ 39 protein protein NOUN NN Number=Sing _ _ _ _ 40 TFE3 TFE3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 alone alone ADJ JJ Degree=Pos _ _ _ _ 43 or or CCONJ CC _ _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 pairwise pairwise ADJ JJ Degree=Pos _ _ _ _ 46 combinations combination NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 11192 # text = Circular permutation and phasing analyses demonstrated that PU.1 binding but not TFE3 or Ets-1 bends mu enhancer DNA toward the major groove. 1 Circular circular ADJ JJ Degree=Pos _ _ _ _ 2 permutation permutation NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 phasing phasing VERB VBG VerbForm=Ger _ _ _ _ 5 analyses analysis NOUN NNS Number=Plur _ _ _ _ 6 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 PU.1 PU.1 PROPN NNP Number=Sing _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 but but CCONJ CC _ _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 TFE3 TFE3 NUM CD NumType=Card _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 Ets ets NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 bends bend NOUN NNS Number=Plur _ _ _ _ 18 mu mu NOUN NN Number=Sing _ _ _ _ 19 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 20 DNA dna NOUN NN Number=Sing _ _ _ _ 21 toward toward ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 major major ADJ JJ Degree=Pos _ _ _ _ 24 groove groove NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 11193 # text = We propose that the requirement for precise spacing of the muA and muB elements is due in part to a directed DNA bend induced by PU.1. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 requirement requirement NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 precise precise ADJ JJ Degree=Pos _ _ _ _ 8 spacing spacing NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 muA mua NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 muB mub NOUN NN Number=Sing _ _ _ _ 14 elements element NOUN NNS Number=Plur _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 due due ADP IN _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 part part NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 DNA dna NOUN NN Number=Sing _ _ _ _ 23 bend bend NOUN NN Number=Sing _ _ _ _ 24 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 PU.1 Pu.1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11194 # text = Document 0030012495 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012495 0030012495 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11195 # text = Regulation of the megakaryocytic glycoprotein IX promoter by the oncogenic Ets transcription factor Fli-1. Glycoprotein (GP) IX is a subunit of the von Willebrand receptor, GPIb-V-IX, which mediates adhesion of platelets to the subendothelium of damaged blood vessels. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 5 glycoprotein glycoprotein NOUN NN Number=Sing _ _ _ _ 6 IX ix NOUN NN Number=Sing _ _ _ _ 7 promoter promoter NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 oncogenic oncogenic ADJ JJ Degree=Pos _ _ _ _ 11 Ets Ets PROPN NNPS Number=Plur _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 Fli Fli PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 1 1 X LS _ _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n 18 Glycoprotein Glycoprotein PROPN NNP Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 GP GP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 IX Ix PROPN NNP Number=Sing _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 subunit subunit NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 von von PROPN NNP Number=Sing _ _ _ _ 29 Willebrand Willebrand PROPN NNP Number=Sing _ _ _ _ 30 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 GPIb GPIb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 V V PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 IX IX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 which which PRON WDT PronType=Rel _ _ _ _ 39 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 40 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 platelets platelet NOUN NNS Number=Plur _ _ _ _ 43 to to ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 subendothelium subendothelium NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 damaged damage VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 48 blood blood NOUN NN Number=Sing _ _ _ _ 49 vessels vessel NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 11196 # text = Previous characterization of the GPIX promoter identified a functional Ets site that, when disrupted, reduced promoter activity. 1 Previous previous ADJ JJ Degree=Pos _ _ _ _ 2 characterization characterization NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 GPIX GPIX PROPN NNP Number=Sing _ _ _ _ 6 promoter promoter NOUN NN Number=Sing _ _ _ _ 7 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 functional functional ADJ JJ Degree=Pos _ _ _ _ 10 Ets Ets PROPN NNPS Number=Plur _ _ _ _ 11 site site NOUN NN Number=Sing _ _ _ _ 12 that that ADV WRB PronType=Rel _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 when when ADV WRB PronType=Int _ _ _ _ 15 disrupted disrupt VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 promoter promoter ADJ JJ Degree=Pos _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 11197 # text = However, the Ets protein(s) that regulated GPIX promoter expression was unknown. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 Ets ets PROPN NNPS Number=Plur _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 s s X AFX _ _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 regulated regulate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 GPIX Gpix PROPN NNP Number=Sing _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 11198 # text = In this study, transient cotransfection of several GPIX promoter/reporter constructs into 293T kidney fibroblasts with a Fli-1 expression vector shows that the oncogenic protein Fli-1 can transactivate the GPIX promoter when an intact GPIX Ets site is present. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 transient transient ADJ JJ Degree=Pos _ _ _ _ 6 cotransfection cotransfection NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 several several ADJ JJ Degree=Pos _ _ _ _ 9 GPIX GPIX PROPN NNP Number=Sing _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 reporter reporter NOUN NN Number=Sing _ _ _ _ 13 constructs construct NOUN NNS Number=Plur _ _ _ _ 14 into into ADP IN _ _ _ _ _ 15 293T 293t ADJ JJ Degree=Pos _ _ _ _ 16 kidney kidney NOUN NN Number=Sing _ _ _ _ 17 fibroblasts fibroblast VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 Fli Fli NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 vector vector NOUN NN Number=Sing _ _ _ _ 25 shows show VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 oncogenic oncogenic ADJ JJ Degree=Pos _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ _ 30 Fli Fli NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ _ 33 can can AUX MD VerbForm=Fin _ _ _ _ 34 transactivate transactivate VERB VB VerbForm=Inf _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 GPIX GPIX PROPN NNP Number=Sing _ _ _ _ 37 promoter promoter NOUN NN Number=Sing _ _ _ _ 38 when when ADV WRB PronType=Int _ _ _ _ 39 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 intact intact NOUN NN Number=Sing _ _ _ _ 41 GPIX Gpix PROPN NNP Number=Sing _ _ _ _ 42 Ets Et PROPN NNPS Number=Plur _ _ _ _ 43 site site NOUN NN Number=Sing _ _ _ _ 44 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 45 present present ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 11199 # text = In addition, Fli-1 binding of the GPIX Ets site was identified in antibody supershift experiments in nuclear extracts derived from hematopoietic human erythroleukemia cells. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 Fli Fli PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 binding binding NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 GPIX GPIX PROPN NNP Number=Sing _ _ _ _ 11 Ets ets PROPN NNPS Number=Plur _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 antibody antibody PRON NN Number=Sing _ _ _ _ 17 supershift supershift ADJ JJ Degree=Pos _ _ _ _ 18 experiments experiment NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 extracts extract NOUN NNS Number=Plur _ _ _ _ 22 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 erythroleukemia erythroleukemia NOUN NN Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 11200 # text = Comparative studies showed that Fli-1 was also able to transactivate the GPIbalpha and, to a lesser extent, the GPIIb promoter. 1 Comparative Comparative ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Fli Fli PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 -1 -1 NUM CD NumType=Card _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 also also ADV RB _ _ _ _ _ 9 able able ADJ JJ Degree=Pos _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 transactivate transactivate VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 GPIbalpha GPIbalpha PROPN NNP Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 lesser lesser ADJ JJR Degree=Cmp _ _ _ _ 19 extent extent NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 GPIIb GPIIb PROPN NNP Number=Sing _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 11201 # text = Immunoblot analysis identified Fli-1 protein in lysates derived from platelets. 1 Immunoblot Immunoblot ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 Fli Fli PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 lysates lysate NOUN NNS Number=Plur _ _ _ _ 10 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 platelets platelet NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 11202 # text = In addition, expression of Fli-1 was identified immunohistochemically in megakaryocytes derived from CD34(+) cells treated with the megakaryocyte differentiation and proliferation factor, thrombopoietin. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 Fli Fli PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 immunohistochemically immunohistochemically ADV RB _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 megakaryocytes megakaryocyte NOUN NNS Number=Plur _ _ _ _ 14 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 CD34 CD34 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 +) +) SYM NFP _ _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 megakaryocyte megakaryocyte NOUN NN Number=Sing _ _ _ _ 24 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 thrombopoietin thrombopoietin NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 11203 # text = These results suggest that Fli-1 is likely to regulate lineage-specific genes during megakaryocytopoiesis. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Fli Fli PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 -1 -1 NUM CD NumType=Card _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 likely likely ADJ JJ Degree=Pos _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 11 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 genes gene NOUN NNS Number=Plur _ _ _ _ 15 during during ADP IN _ _ _ _ _ 16 megakaryocytopoiesis megakaryocytopoiesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11204 # text = Document 0030012500 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012500 0030012500 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11205 # text = Aspirin inhibits nuclear factor-kappa B mobilization and monocyte adhesion in stimulated human endothelial cells. 1 Aspirin aspirin PROPN NNP Number=Sing _ _ _ _ 2 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 mobilization mobilization NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 11 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 stimulated stimulated ADJ JJ Degree=Pos _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11206 # text = BACKGROUND: The induction of vascular cell adhesion molecule-1 (VCAM-1) and E-selectin by tumor necrosis factor-alpha (TNF) is mediated by mobilization of the transcription factor nuclear factor-kappa B (NF-kappa B). 1 BACKGROUND background ADP IN _ _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 The the DET DT Definite=Def|PronType=Art _ _ _ _ 4 induction induction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 9 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT : _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 X LS _ _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 E- E- PUNCT : _ _ _ _ SpaceAfter=No 19 selectin selectin VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 tumor tumor NOUN NN Number=Sing _ _ _ _ 22 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 -alpha -alpha NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 mobilization mobilization NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ _ 36 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 37 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 kappa kappa NOUN NN Number=Sing _ _ _ _ 40 B b NOUN NN Number=Sing _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 kappa kappa NOUN NN Number=Sing _ _ _ _ 45 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 11207 # text = Since salicylates have been reported to inhibit NF-kappa B activation by preventing the degradation of its inhibitor 1 Since since SCONJ IN _ _ _ _ _ 2 salicylates salicylate NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 8 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 by by SCONJ IN _ _ _ _ _ 14 preventing prevent VERB VBG VerbForm=Ger _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 degradation degradation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ # sent_id = 11208 # text = I kappa B, we studied a potential inhibition of this pathway by acetylsalicylate (aspirin) in human umbilical vein endothelial cells (HUVECs). 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa PROPN NNP Number=Sing _ _ _ _ 3 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 potential potential ADJ JJ Degree=Pos _ _ _ _ 9 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 12 pathway pathway NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 acetylsalicylate acetylsalicylate NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 aspirin aspirin NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 21 vein vein NOUN NN Number=Sing _ _ _ _ 22 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 11209 # text = METHODS AND RESULTS: Gel-shift analyses demonstrated dose-dependent inhibition of TNF-induced NF-kappa B mobilization by aspirin at concentrations ranging from 1 to 10 mmol/L. 1 METHODS method NOUN NNS Number=Plur _ _ _ _ 2 AND and CCONJ CC _ _ _ _ _ 3 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ 5 Gel- Gel- SYM NFP _ _ _ _ SpaceAfter=No 6 shift shift VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 analyses analysis NOUN NNS Number=Plur _ _ _ _ 8 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 mobilization mobilization NOUN NN Number=Sing _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 aspirin aspirin NOUN NN Number=Sing _ _ _ _ 24 at at ADP IN _ _ _ _ _ 25 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 26 ranging range VERB VBG VerbForm=Ger _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 1 1 NUM CD NumType=Card _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 10 10 NUM CD NumType=Card _ _ _ _ 31 mmol/ mmol/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 32 L L PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 11210 # text = Induction of VCAM-1 and E-selectin surface expression by TNF was dose-dependently reduced by aspirin over the same range, while induction of intercellular adhesion molecule-1 (ICAM-1) was hardly affected. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 E- E- SYM SYM _ _ _ _ SpaceAfter=No 8 selectin selectin ADJ JJ Degree=Pos _ _ _ _ 9 surface surface NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 TNF TNF PROPN NNP Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 dependently dependently ADV RB _ _ _ _ _ 17 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 aspirin aspirin NOUN NN Number=Sing _ _ _ _ 20 over over ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 same same ADJ JJ Degree=Pos _ _ _ _ 23 range range NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 while while SCONJ IN _ _ _ _ _ 26 induction induction NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 intercellular intercellular ADJ JJ Degree=Pos _ _ _ _ 29 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 30 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 X LS _ _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 39 hardly hardly ADV RB _ _ _ _ _ 40 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 11211 # text = Aspirin appeared to prevent VCAM-1 transcription, since it dose-dependently inhibited induction of VCAM-1 mRNA by TNF. 1 Aspirin aspirin PROPN NNP Number=Sing _ _ _ _ 2 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 prevent prevent VERB VB VerbForm=Inf _ _ _ _ 5 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 since since SCONJ IN _ _ _ _ _ 11 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 12 dose dose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 13 -dependently -dependently ADV RB _ _ _ _ _ 14 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 induction induction NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 11212 # text = As a functional consequence, adhesion of U937 monocytes to TNF-stimulated HUVECs was markedly reduced by aspirin due to suppression of VCAM-1 and E-selectin upregulation. 1 As as ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 functional functional ADJ JJ Degree=Pos _ _ _ _ 4 consequence consequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 U937 U937 NUM CD NumType=Card _ _ _ _ 9 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 stimulated stimulate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 HUVECs HUVEC PROPN NNP Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 markedly markedly ADV RB _ _ _ _ _ 17 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 aspirin aspirin NOUN NN Number=Sing _ _ _ _ 20 due due ADP IN _ _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 suppression suppression NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 VCAM VCAM NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - SYM SYM _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 E- E- SYM SYM _ _ _ _ SpaceAfter=No 29 selectin selectin ADJ JJ Degree=Pos _ _ _ _ 30 upregulation upregulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11213 # text = These effects of aspirin were not related to the inhibition of cyclooxygenase activity, since indomethacin was ineffective. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 aspirin aspirin NOUN NN Number=Sing _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 related related ADJ JJ Degree=Pos _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 cyclooxygenase cyclooxygenase NOUN NN Number=Sing _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 since since SCONJ IN _ _ _ _ _ 16 indomethacin indomethacin NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 ineffective ineffective ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 11214 # text = CONCLUSIONS: 1 CONCLUSIONS conclusion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 11215 # text = Our data suggest that aspirin inhibits NF-kappa B mobilization, induction of VCAM-1 and E-selectin, and subsequent monocyte adhesion in endothelial cells stimulated by TNF, thereby providing an additional mechanism for therapeutic effects of aspirin. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 aspirin aspirin ADJ JJ Degree=Pos _ _ _ _ 6 inhibits inhibits NOUN NNS Number=Plur _ _ _ _ 7 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 mobilization mobilization NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 induction induction NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 VCAM VCAM NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - SYM SYM _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 selectin selectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 24 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 25 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ _ 29 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 thereby thereby ADV RB _ _ _ _ _ 34 providing provide VERB VBG VerbForm=Ger _ _ _ _ 35 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 additional additional ADJ JJ Degree=Pos _ _ _ _ 37 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 38 for for ADP IN _ _ _ _ _ 39 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 40 effects effect NOUN NNS Number=Plur _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 aspirin aspirin NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11216 # text = Document 0030012501 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012501 0030012501 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11217 # text = The role of early growth response gene 1 (egr-1) in regulation of the immune response. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 early early ADJ JJ Degree=Pos _ _ _ _ 5 growth growth NOUN NN Number=Sing _ _ _ _ 6 response response NOUN NN Number=Sing _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 1 1 NUM CD NumType=Card _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 egr egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 X LS _ _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 regulation regulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 immune immune ADJ JJ Degree=Pos _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11218 # text = The induction of immediate early genes in cells of the immune system is critical to determining the ultimate outcome of exposure to antigen. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 5 early early ADJ JJ Degree=Pos _ _ _ _ 6 genes gene NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 immune immune ADJ JJ Degree=Pos _ _ _ _ 12 system system NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 critical critical ADJ JJ Degree=Pos _ _ _ _ 15 to to SCONJ IN _ _ _ _ _ 16 determining determine VERB VBG VerbForm=Ger _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 ultimate ultimate ADJ JJ Degree=Pos _ _ _ _ 19 outcome outcome NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 exposure exposure NOUN NN Number=Sing _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 antigen antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 11219 # text = The importance of many of these genes relates to the role their transcription factor products play in dictating patterns of expression of downstream, function-related genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 importance importance NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 many many ADJ JJ Degree=Pos _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 genes gene NOUN NNS Number=Plur _ _ _ _ 8 relates relate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 products product NOUN NNS Number=Plur _ _ _ _ 16 play play VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 dictating dictat ADJ JJ Degree=Pos _ _ _ _ 19 patterns pattern NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 downstream downstream NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 related relate ADJ JJ Degree=Pos _ _ _ _ 28 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 11220 # text = Evidence from several systems indicates that the immediate early gene, egr-1 may be of particular importance in the immune system. 1 Evidence evidence NOUN NN Number=Sing _ _ _ _ 2 from from ADP IN _ _ _ _ _ 3 several several ADJ JJ Degree=Pos _ _ _ _ 4 systems system NOUN NNS Number=Plur _ _ _ _ 5 indicates indicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 9 early early ADJ JJ Degree=Pos _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 egr egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 may may AUX MD VerbForm=Fin _ _ _ _ 16 be be AUX VB VerbForm=Inf _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 particular particular ADJ JJ Degree=Pos _ _ _ _ 19 importance importance NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 immune immune ADJ JJ Degree=Pos _ _ _ _ 23 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 11221 # text = Recently, the egr-1 promoter has been shown to be highly responsive to the diverse biochemical signals generated by antigen and cytokines in cells of the immune system. 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 egr egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 -1 -1 NUM CD NumType=Card _ _ _ _ 6 promoter promoter NOUN NN Number=Sing _ _ _ _ 7 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 9 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 highly highly ADV RB _ _ _ _ _ 13 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 diverse diverse ADJ JJ Degree=Pos _ _ _ _ 17 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 18 signals signal NOUN NNS Number=Plur _ _ _ _ 19 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 antigen antigen NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 immune immune ADJ JJ Degree=Pos _ _ _ _ 29 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 11222 # text = Furthermore, an important role for egr-1 in determining the differentiation pathway of myeloid cell precursors has been recently elaborated. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 important important ADJ JJ Degree=Pos _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 egr egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 -1 -1 NUM CD NumType=Card _ _ _ _ 9 in in SCONJ IN _ _ _ _ _ 10 determining determine VERB VBG VerbForm=Ger _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 13 pathway pathway NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 precursors precursor NOUN NNS Number=Plur _ _ _ _ 18 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 20 recently recently ADV RB _ _ _ _ _ 21 elaborated elaborate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 11223 # text = Finally, potential targets of regulation by the zinc-finger transcription factor encoded by egr-1 include the interleukin-2, CD44, ICAM-1, and tumor necrosis factor genes. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 potential potential ADJ JJ Degree=Pos _ _ _ _ 4 targets target NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 regulation regulation NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 zinc zinc NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 finger finger NOUN NN Number=Sing _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 egr egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 -1 -1 NUM CD NumType=Card _ _ _ _ 18 include include VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 CD44 Cd44 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 tumor tumor NOUN NN Number=Sing _ _ _ _ 32 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 33 factor factor NOUN NN Number=Sing _ _ _ _ 34 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 11224 # text = The role of egr-1 in regulation of the immune response will be discussed in the context of these recent studies. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 egr egr NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 -1 -1 NUM CD NumType=Card _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 regulation regulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 immune immune ADJ JJ Degree=Pos _ _ _ _ 11 response response NOUN NN Number=Sing _ _ _ _ 12 will will AUX MD VerbForm=Fin _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 discussed discuss VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 context context NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 20 recent recent ADJ JJ Degree=Pos _ _ _ _ 21 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11225 # text = Document 0030012506 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012506 0030012506 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11226 # text = T-cell functional regions of the human IL-3 proximal promoter. 1 T- T- SYM NFP _ _ _ _ SpaceAfter=No 2 cell cell VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 3 functional functional ADJ JJ Degree=Pos _ _ _ _ 4 regions region NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 3 3 NUM CD NumType=Card _ _ _ _ 11 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11227 # text = The human interleukin-3 (IL-3) gene is expressed almost exclusively in activated T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 3 3 NUM CD NumType=Card _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 almost almost ADV RB _ _ _ _ _ 15 exclusively exclusively ADV RB _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 11228 # text = Its expression is regulated at both the transcriptional and post-transcriptional level. 1 Its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 at at ADP IN _ _ _ _ _ 6 both both CCONJ CC _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 post post X AFX _ _ _ _ SpaceAfter=No 11 -transcriptional -transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 11229 # text = We have previously shown that treatment of Jurkat T cells with phytohemaglutinin (PHA) and the phorbol ester, PMA, activated transcription initiation from the IL-3 gene. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 treatment treatment NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 9 T T PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 phytohemaglutinin phytohemaglutinin NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 PHA PHA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 19 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 initiation initiation NOUN NN Number=Sing _ _ _ _ 26 from from ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 3 3 NUM CD NumType=Card _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 11230 # text = To define the regions of the gene required for transcription activation, we generated a series of reporter constructs containing different regions of the IL-3 gene 5' and 3' flanking sequences. 1 To to PART TO _ _ _ _ _ 2 define define VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 regions region NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 generated generate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 series series NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 reporter reporter NOUN NN Number=Sing _ _ _ _ 19 constructs construct NOUN NNS Number=Plur _ _ _ _ 20 containing contain VERB VBG VerbForm=Ger _ _ _ _ 21 different different ADJ JJ Degree=Pos _ _ _ _ 22 regions region NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 3 3 NUM CD NumType=Card _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 ' ' NOUN NNS Number=Plur _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ' ' PUNCT `` _ _ _ _ _ 34 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 35 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 11231 # text = Both positive and negative regulatory elements were identified in the proximal 5' flanking region of the IL-3 gene. 1 Both both CCONJ CC _ _ _ _ _ 2 positive positive ADJ JJ Degree=Pos _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 negative negative ADJ JJ Degree=Pos _ _ _ _ 5 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 6 elements element NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 12 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ' ' PUNCT `` _ _ _ _ _ 14 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 15 region region NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 3 3 NUM CD NumType=Card _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 11232 # text = The promoter region between -173 and -60 contained the strongest activating elements. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 promoter promoter NOUN NN Number=Sing _ _ _ _ 3 region region NOUN NN Number=Sing _ _ _ _ 4 between between ADP IN _ _ _ _ _ 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 173 173 NUM CD NumType=Card _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 - - SYM SYM _ _ _ _ SpaceAfter=No 9 60 60 NUM CD NumType=Card _ _ _ _ 10 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 strongest strongest ADJ JJS Degree=Sup _ _ _ _ 13 activating activating NOUN NN Number=Sing _ _ _ _ 14 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 11233 # text = The transcription factor AP-1 could bind to this positive activator region of the promoter. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 could could AUX MD VerbForm=Fin _ _ _ _ 8 bind bind VERB VB VerbForm=Inf _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 11 positive positive ADJ JJ Degree=Pos _ _ _ _ 12 activator activator NOUN NN Number=Sing _ _ _ _ 13 region region NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 11234 # text = We also examined the function of the IL-3 CK-1/CK-2 elements that are present in many cytokine genes and found that they acted as a repressor of basal level expression when cloned upstream of a heterologous promoter but were also inducible by PMA/PHA. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 function function NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 3 3 NUM CD NumType=Card _ _ _ _ 11 CK ck NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 -1/CK -1/ck NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - SYM SYM _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 elements element NOUN NNS Number=Plur _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 present present ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 many many ADJ JJ Degree=Pos _ _ _ _ 21 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 22 genes gene NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 27 acted act VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 as as ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 repressor repressor NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 basal basal ADJ JJ Degree=Pos _ _ _ _ 33 level level NOUN NN Number=Sing _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ _ 35 when when ADV WRB PronType=Int _ _ _ _ 36 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 upstream upstream NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 41 promoter promoter NOUN NN Number=Sing _ _ _ _ 42 but but CCONJ CC _ _ _ _ _ 43 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 44 also also ADV RB _ _ _ _ _ 45 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 46 by by ADP IN _ _ _ _ _ 47 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 / / PUNCT , _ _ _ _ SpaceAfter=No 49 PHA. PHA. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11235 # text = Document 0030012512 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012512 0030012512 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11236 # text = Negative regulation of human immunodeficiency virus type 1 expression in monocytes: role of the 65-kDa plus 50-kDa NF-kappa B dimer. 1 Negative negative ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 type type NOUN NN Number=Sing _ _ _ _ 8 1 1 NUM CD NumType=Card _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 : : PUNCT : _ _ _ _ _ 13 role role NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 65 65 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kDa kDa NOUN NN Number=Sing _ _ _ _ 19 plus plus CCONJ CC _ _ _ _ _ 20 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 kDa kDa PROPN NNP Number=Sing _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 dimer dimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11237 # text = Although monocytic cells can provide a reservoir for viral production in vivo, their regulation of human immunodeficiency virus type 1 (HIV-1) transcription can be either latent, restricted, or productive. 1 Although although SCONJ IN _ _ _ _ _ 2 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 can can AUX MD VerbForm=Fin _ _ _ _ 5 provide provide VERB VB VerbForm=Inf _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 reservoir reservoir NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 viral viral ADJ JJ Degree=Pos _ _ _ _ 10 production production NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 regulation regulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 19 virus virus NOUN NN Number=Sing _ _ _ _ 20 type type NOUN NN Number=Sing _ _ _ _ 21 1 1 NUM CD NumType=Card _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 can can AUX MD VerbForm=Fin _ _ _ _ 29 be be AUX VB VerbForm=Inf _ _ _ _ 30 either either ADV RB _ _ _ _ _ 31 latent latent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 restricted restricted VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 or or CCONJ CC _ _ _ _ _ 36 productive productive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 11238 # text = These differences in gene expression have not been molecularly defined. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 differences difference NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 gene gene ADJ JJ Degree=Pos _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 9 molecularly molecularly ADV RB _ _ _ _ _ 10 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 11239 # text = In THP-1 cells with restricted HIV expression, there is an absence of DNA-protein binding complex formation with the HIV-1 promoter-enhancer associated with markedly less viral RNA production. 1 In in ADP IN _ _ _ _ _ 2 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 HIV Hiv NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 there there PRON EX _ _ _ _ _ 12 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 absence absence NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 complex complex ADJ JJ Degree=Pos _ _ _ _ 21 formation formation NOUN NN Number=Sing _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 30 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 markedly markedly ADV RB _ _ _ _ _ 33 less less ADV RBR Degree=Cmp _ _ _ _ 34 viral viral ADJ JJ Degree=Pos _ _ _ _ 35 RNA RNa PROPN NNP Number=Sing _ _ _ _ 36 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 11240 # text = This absence of binding was localized to the NF-kappa B region of the HIV-1 enhancer; the 65-kDa plus 50-kDa NF-kappa B heterodimer was preferentially lost. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 absence absence NOUN NN Number=Sing _ _ _ _ 3 of of SCONJ IN _ _ _ _ _ 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 localized localize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 region region NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ; ; PUNCT , _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 65 65 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kDa kDa NOUN NN Number=Sing _ _ _ _ 25 plus plus CCONJ CC _ _ _ _ _ 26 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kDa kDa NOUN NN Number=Sing _ _ _ _ 29 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappa kappa NOUN NN Number=Sing _ _ _ _ 32 B b NOUN NN Number=Sing _ _ _ _ 33 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 34 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 35 preferentially preferentially ADV RB _ _ _ _ _ 36 lost lose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 11241 # text = Adding purified NF-kappa B protein to nuclear extracts from cells with restricted expression overcomes this lack of binding. 1 Adding add AUX VBG VerbForm=Ger _ _ _ _ 2 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 extracts extract NOUN NNS Number=Plur _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 overcomes overcome VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 18 lack lack NOUN NN Number=Sing _ _ _ _ 19 of of SCONJ IN _ _ _ _ _ 20 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 11242 # text = In addition, treatment of these nuclear extracts with sodium deoxycholate restored their ability to form the heterodimer, suggesting the presence of an inhibitor of NF-kappa B activity. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 treatment treatment NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 extracts extract NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 sodium sodium NOUN NN Number=Sing _ _ _ _ 11 deoxycholate deoxycholate NOUN NN Number=Sing _ _ _ _ 12 restored restore VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 ability ability NOUN NN Number=Sing _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 form form VERB VB VerbForm=Inf _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 heterodimer heterodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 presence presence NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa PROPN NNP Number=Sing _ _ _ _ 30 B b ADJ JJ Degree=Pos _ _ _ _ 31 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 11243 # text = Furthermore, treatment of nuclear extracts from these cells that had restricted expression with lipopolysaccharide increased viral production and NF-kappa B activity. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 treatment treatment NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 extracts extract NOUN NNS Number=Plur _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 16 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 viral viral ADJ JJ Degree=Pos _ _ _ _ 18 production production NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappa kappa NOUN NN Number=Sing _ _ _ _ 23 B b NOUN NN Number=Sing _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 11244 # text = Antiserum specific for NF-kappa B binding proteins, but not c-rel-specific antiserum, disrupted heterodimer complex formation. 1 Antiserum Antiserum PROPN NNP Number=Sing _ _ _ _ 2 specific specific ADJ JJ Degree=Pos _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 not not ADV RB _ _ _ _ _ 13 c- c- SYM NFP _ _ _ _ SpaceAfter=No 14 rel-specific rel-specific ADJ JJ Degree=Pos _ _ _ _ 15 antiserum antiserum NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 disrupted disrupt VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 19 complex complex NOUN NN Number=Sing _ _ _ _ 20 formation formation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 11245 # text = Thus, both NF-kappa B-binding complexes are needed for optimal viral transcription. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 both both CCONJ CC _ _ _ _ _ 4 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 complexes complex NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 needed need VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 15 viral viral ADJ JJ Degree=Pos _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 11246 # text = Binding of the 65-kDa plus 50-kDa heterodimer to the HIV-1 enhancer can be negatively regulated in monocytes, providing one mechanism restricting HIV-1 gene expression. 1 Binding binding NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 65 65 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kDa kDa NOUN NN Number=Sing _ _ _ _ 7 plus plus CCONJ CC _ _ _ _ _ 8 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kDa kDa NOUN NN Number=Sing _ _ _ _ 11 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 18 can can AUX MD VerbForm=Fin _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 negatively negatively ADV RB _ _ _ _ _ 21 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 providing provid VERB VBG VerbForm=Ger _ _ _ _ 26 one one NUM CD NumType=Card _ _ _ _ 27 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 28 restricting restrict VERB VBG VerbForm=Ger _ _ _ _ 29 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 gene gene NOUN NN Number=Sing _ _ _ _ 33 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11247 # text = Document 0030012516 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012516 0030012516 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11248 # text = Cooperation of binding sites for STAT6 and NF kappa B/rel in the IL-4-induced up-regulation of the human IgE germline promoter. 1 Cooperation cooperation NOUN NN Number=Sing _ _ _ _ 2 of of SCONJ IN _ _ _ _ _ 3 binding bind VERB VBG VerbForm=Ger _ _ _ _ 4 sites site NOUN NNS Number=Plur _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 STAT6 Stat6 PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ _ 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 rel rel NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 regulation regulation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 human human ADJ JJ Degree=Pos _ _ _ _ 26 IgE Ige NOUN NN Number=Sing _ _ _ _ 27 germline germline NOUN NN Number=Sing _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11249 # text = Ig heavy chain class switching is directed by cytokines inducing transcription from unrearranged CH genes. 1 Ig ig ADJ JJ Degree=Pos _ _ _ _ 2 heavy heavy ADJ JJ Degree=Pos _ _ _ _ 3 chain chain NOUN NN Number=Sing _ _ _ _ 4 class class NOUN NN Number=Sing _ _ _ _ 5 switching switching VERB VBG VerbForm=Ger _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 directed direct VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 10 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 unrearranged unrearrange ADJ JJ Degree=Pos _ _ _ _ 14 CH Ch NOUN NN Number=Sing _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 11250 # text = Subsequently, such primed cells can undergo switch recombination to express the selected new isotype. 1 Subsequently subsequently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 such such ADJ JJ Degree=Pos _ _ _ _ 4 primed prim ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 can can AUX MD VerbForm=Fin _ _ _ _ 7 undergo undergo ADV RB _ _ _ _ _ 8 switch switch VERB VB VerbForm=Inf _ _ _ _ 9 recombination recombination NOUN NN Number=Sing _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 express express VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 selected select VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 new new ADJ JJ Degree=Pos _ _ _ _ 15 isotype isotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 11251 # text = In the case of IgE class switching, IL-4 activates the IgE germline promoter by inducing the interaction of the transcription factor STAT6 (IL-4STAT) with a responsive DNA element in the proximal region of the promoter. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 case case NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 IgE Ige ADJ JJ Degree=Pos _ _ _ _ 6 class class NOUN NN Number=Sing _ _ _ _ 7 switching switching VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 4 4 NUM CD NumType=Card _ _ _ _ 12 activates activate NOUN NNS Number=Plur _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 IgE Ige PROPN NNP Number=Sing _ _ _ _ 15 germline germline NOUN NN Number=Sing _ _ _ _ 16 promoter promoter ADV RB _ _ _ _ _ 17 by by SCONJ IN _ _ _ _ _ 18 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 interaction interaction NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 STAT6 STAT6 PROPN NNP Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 4STAT 4stat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 34 DNA dna NOUN NN Number=Sing _ _ _ _ 35 element element NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 39 region region NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 11252 # text = This study describes the characterization of two additional cis-acting elements that interact with members of the NF kappa B/rel transcription factor family in an IL-4-independent fashion. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 describes describe VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 characterization characterization NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 additional additional ADJ JJ Degree=Pos _ _ _ _ 9 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 -acting -act VERB VBG VerbForm=Ger _ _ _ _ 11 elements element NOUN NNS Number=Plur _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 interact interact VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 members member NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ _ 19 kappa kappa PROPN NNP Number=Sing _ _ _ _ 20 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 rel rel NOUN NN Number=Sing _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 family family NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 independent independent ADJ JJ Degree=Pos _ _ _ _ 33 fashion fashion NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 11253 # text = Electrophoretic mobility shift assays show that the nucleoprotein complex formed on the upstream site (NF kappa B1) contains the classical p50/p65 heterodimer. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assays assay NOUN NNS Number=Plur _ _ _ _ 5 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 nucleoprotein nucleoprotein NOUN NN Number=Sing _ _ _ _ 9 complex complex NOUN NN Number=Sing _ _ _ _ 10 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 NF NF PROPN NNP Number=Sing _ _ _ _ 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B1 B1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 classical classical ADJ JJ Degree=Pos _ _ _ _ 23 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 / / PUNCT , _ _ _ _ SpaceAfter=No 25 p65 p65 NUM CD NumType=Card _ _ _ _ 26 heterodimer heterodimer NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 11254 # text = The complex on the proximal site (NF kappa B2) appears to be composed of p50 and relB. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 complex complex NOUN NN Number=Sing _ _ _ _ 3 on on ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 6 site site NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 NF NF PROPN NNP Number=Sing _ _ _ _ 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B2 b2 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 p50 p50 NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 relB relb NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 11255 # text = IgE germline promoter reporter gene constructs carrying point mutations in the NF kappa B2 site were largely unresponsive to IL-4 stimulation in transient transfection experiments, while plasmids with similar mutations in the NF kappa B1 site responded to cytokine stimulation better than the wild-type promoter. 1 IgE Ige ADJ JJ Degree=Pos _ _ _ _ 2 germline germline NOUN NN Number=Sing _ _ _ _ 3 promoter promoter NOUN NN Number=Sing _ _ _ _ 4 reporter reporter NOUN NN Number=Sing _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 constructs construct NOUN NNS Number=Plur _ _ _ _ 7 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 8 point point NOUN NN Number=Sing _ _ _ _ 9 mutations mutation NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ _ 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B2 B2 NUM CD NumType=Card _ _ _ _ 15 site site NOUN NN Number=Sing _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 largely largely ADV RB _ _ _ _ _ 18 unresponsive unresponsive ADJ JJ Degree=Pos _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 4 4 NUM CD NumType=Card _ _ _ _ 23 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 transient transient ADJ JJ Degree=Pos _ _ _ _ 26 transfection transfection NOUN NN Number=Sing _ _ _ _ 27 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 while while SCONJ IN _ _ _ _ _ 30 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 similar similar ADJ JJ Degree=Pos _ _ _ _ 33 mutations mutation NOUN NNS Number=Plur _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 NF NF PROPN NNP Number=Sing _ _ _ _ 37 kappa kappa PROPN NNP Number=Sing _ _ _ _ 38 B1 B1 PROPN NNP Number=Sing _ _ _ _ 39 site site NOUN NN Number=Sing _ _ _ _ 40 responded respond VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 41 to to PART TO _ _ _ _ _ 42 cytokine cytokine VERB VB VerbForm=Inf _ _ _ _ 43 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 44 better better ADJ JJR Degree=Cmp _ _ _ _ 45 than than ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 type type NOUN NN Number=Sing _ _ _ _ 50 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 11256 # text = The NF kappa 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ _ 3 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 11257 # text = B2 effect was dependent on the presence of the STAT6 binding site, demonstrating that the NF kappa B2 motif is necessary but not sufficient for mediating cytokine up-regulation. 1 B2 B2 NUM CD NumType=Card _ _ _ _ 2 effect effect NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 presence presence NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 STAT6 Stat6 NOUN NN Number=Sing _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 demonstrating demonstrat VERB VBG VerbForm=Ger _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ _ 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B2 b2 NUM CD NumType=Card _ _ _ _ 20 motif motif NOUN NN Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 23 but but CCONJ CC _ _ _ _ _ 24 not not ADV RB _ _ _ _ _ 25 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 26 for for SCONJ IN _ _ _ _ _ 27 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 28 cytokine cytokine PRON PRP _ _ _ _ _ 29 up up ADP RP _ _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 11258 # text = In addition, the combination of a NF kappa B/rel binding site and the STAT6 response element conferred IL-4 inducibility to a heterologous minimal promoter, while the individual sites had no effect. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 combination combination NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ _ 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 rel rel X FW Foreign=Yes _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 STAT6 Stat6 PROPN NNP Number=Sing _ _ _ _ 18 response response NOUN NN Number=Sing _ _ _ _ 19 element element NOUN NN Number=Sing _ _ _ _ 20 conferred confer VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 4 4 NUM CD NumType=Card _ _ _ _ 24 inducibility inducibility NOUN NN Number=Sing _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 28 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 while while SCONJ IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 individual individual ADJ JJ Degree=Pos _ _ _ _ 34 sites site NOUN NNS Number=Plur _ _ _ _ 35 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 no no DET DT _ _ _ _ _ 37 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 11259 # text = The available data suggest that the NF kappa B2 nucleoprotein complex may cooperate with DNA-bound STAT6 to achieve IL-4-dependent activation of the human IgE germline gene. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 available available ADJ JJ Degree=Pos _ _ _ _ 3 data data NOUN NN Number=Sing _ _ _ _ 4 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ _ 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B2 B2 NUM CD NumType=Card _ _ _ _ 10 nucleoprotein nucleoprotein NOUN NN Number=Sing _ _ _ _ 11 complex complex NOUN NN Number=Sing _ _ _ _ 12 may may AUX MD VerbForm=Fin _ _ _ _ 13 cooperate cooperate VERB VB VerbForm=Inf _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 bound bound ADJ JJ Degree=Pos _ _ _ _ 18 STAT6 Stat6 NOUN NN Number=Sing _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 achieve achieve VERB VB VerbForm=Inf _ _ _ _ 21 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 IgE Ige NOUN NN Number=Sing _ _ _ _ 31 germline germline NOUN NN Number=Sing _ _ _ _ 32 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11260 # text = Document 0030012522 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012522 0030012522 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11261 # text = Retinoic acid inhibits CD40 + interleukin-4-mediated IgE production in vitro. 1 Retinoic Retinoic ADJ JJ Degree=Pos _ _ _ _ 2 acid acid ADJ JJ Degree=Pos _ _ _ _ 3 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 4 CD40 CD40 NUM CD NumType=Card _ _ _ _ 5 + + SYM SYM _ _ _ _ _ 6 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 -mediated -mediated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 IgE Ige ADJ JJ Degree=Pos _ _ _ _ 11 production production NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11262 # text = To elucidate the role of retinoic acid (RA) in anti-CD40 + interleukin-4 (IL-4)-mediated B-cell activation, the effect of 10(-12) to 10(-6) mol/L RA was studied in anti-CD40 (1 microgram/mL) + IL-4 (5 ng/mL)-mediated proliferation and Ig synthesis by human peripheral blood mononuclear cells (PBMC) and B cells in healthy donors. 1 To to PART TO _ _ _ _ _ 2 elucidate elucidate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 7 acid acid NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 RA RA X AFX _ _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 anti-CD40 anti-CD40 NUM CD NumType=Card _ _ _ _ 13 + + SYM SYM _ _ _ _ _ 14 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 4 4 NUM CD NumType=Card _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - SYM SYM _ _ _ _ SpaceAfter=No 20 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 effect effect NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 (-12 (-12 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 to to ADP IN _ _ _ _ _ 35 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 (- (- PUNCT . _ _ _ _ SpaceAfter=No 37 6 6 X LS _ _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 mol/ molith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 40 L L PROPN NNP Number=Sing _ _ _ _ 41 RA RA PROPN NNP Number=Sing _ _ _ _ 42 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 43 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 anti-CD40 anti-CD40 NUM CD NumType=Card _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ _ 48 microgram/ microgram/ PUNCT HYPH _ _ _ _ SpaceAfter=No 49 mL ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ _ 51 + + SYM SYM _ _ _ _ _ 52 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 53 - - SYM SYM _ _ _ _ SpaceAfter=No 54 4 4 NUM CD NumType=Card _ _ _ _ 55 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 56 5 5 NUM CD NumType=Card _ _ _ _ 57 ng/mL ng/ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 59 -mediated -mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 60 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 61 and and CCONJ CC _ _ _ _ _ 62 Ig ig PROPN NNP Number=Sing _ _ _ _ 63 synthesis synthesis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 64 by by ADP IN _ _ _ _ _ 65 human human ADJ JJ Degree=Pos _ _ _ _ 66 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 67 blood blood NOUN NN Number=Sing _ _ _ _ 68 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 69 cells cell NOUN NNS Number=Plur _ _ _ _ 70 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 71 PBMC PBMC NOUN NN Number=Sing _ _ _ SpaceAfter=No 72 ) ) PUNCT -RRB- _ _ _ _ _ 73 and and CCONJ CC _ _ _ _ _ 74 B b ADJ JJ Degree=Pos _ _ _ _ 75 cells cell NOUN NNS Number=Plur _ _ _ _ 76 in in ADP IN _ _ _ _ _ 77 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 78 donors donor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 79 . . PUNCT . _ _ _ _ _ # sent_id = 11263 # text = Anti-CD40 + 1 Anti-CD40 Anti-CD40 NUM CD NumType=Card _ _ _ _ 2 + + SYM NFP _ _ _ _ _ # sent_id = 11264 # text = IL-4-mediated proliferation of PBMC and B cells was inhibited by RA in a dose-dependent manner, with maximal inhibition of 62% +/- 1 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 PBMC PBMC PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 B b ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 RA RA PROPN NNP Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 21 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 25 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 62 62 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 % % SYM NN Number=Sing _ _ _ _ 29 +/- +/- SYM NFP _ _ _ _ _ # sent_id = 11265 # text = 5% in PBMC and 55% 1 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 % % SYM NN Number=Sing _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 PBMC PBMC PROPN NNP Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 55 55 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 % % SYM NN Number=Sing _ _ _ _ # sent_id = 11266 # text = +/- 4.4% in B cells by all-trans RA, and 58% +/- 6.7% and 51% +/- 4.7%, respectively by 13-cis RA. 1 +/- +/- SYM NFP _ _ _ _ _ 2 4.4 4.4 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 % % SYM NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 B b ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 all all DET DT _ _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 trans tran NOUN NNS Number=Plur _ _ _ _ 11 RA Ra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 58 58 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 % % SYM NN Number=Sing _ _ _ _ 16 +/- +/- SYM SYM _ _ _ _ _ 17 6.7 6.7 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 % % SYM NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 51 51 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 % % SYM NN Number=Sing _ _ _ _ 22 +/- +/- SYM SYM _ _ _ _ _ 23 4.7 4.7 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 respectively respectively ADV RB _ _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT : _ _ _ _ SpaceAfter=No 30 cis cis NOUN NN Number=Sing _ _ _ _ 31 RA Ra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 11267 # text = IgE synthesis was even more markedly inhibited by RA starting at concentrations of >10(-14) mol/L for B cells and >10(-10) mol/L for PBMC. 1 IgE Ige VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 synthesis synthesis PRON DT Number=Sing|PronType=Dem _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 even even ADV RB _ _ _ _ _ 5 more more ADV RBR _ _ _ _ _ 6 markedly markedly ADV RB _ _ _ _ _ 7 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 RA RA PROPN NNP Number=Sing _ _ _ _ 10 starting start VERB VBG VerbForm=Ger _ _ _ _ 11 at at ADP IN _ _ _ _ _ 12 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 >10(-14 >10(-14 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 mol/L mol/l NOUN NN Number=Sing _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 B b ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 >10(-10 >10(-10 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 mol/L mol/l NOUN NN Number=Sing _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 PBMC PBMC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11268 # text = Maximal inhibition of IgE production for B cells was at 10(-8) mol/L for all-trans RA (94% +/- 1.8%) and 96% +/- 3.2% for 13-cis RA. 1 Maximal Maximal ADJ JJ Degree=Pos _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 IgE Ige ADJ JJ Degree=Pos _ _ _ _ 5 production production NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 B b ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 at at ADP IN _ _ _ _ _ 11 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 (- (- PUNCT . _ _ _ _ SpaceAfter=No 13 8 8 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 mol/L mol/l NOUN NN Number=Sing _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 all all DET DT _ _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 trans trans NOUN NNS Number=Plur _ _ _ _ 20 RA RA PROPN NNP Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 94 94 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 % % SYM NN Number=Sing _ _ _ _ 24 +/- +/- SYM SYM _ _ _ _ _ 25 1.8 1.8 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 96 96 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 % % SYM NN Number=Sing _ _ _ _ 31 +/- +/- SYM SYM _ _ _ _ _ 32 3.2 3.2 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 % % SYM NN Number=Sing _ _ _ _ 34 for for ADP IN _ _ _ _ _ 35 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 - - PUNCT : _ _ _ _ SpaceAfter=No 37 cis cis NOUN NN Number=Sing _ _ _ _ 38 RA Ra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 11269 # text = Low concentrations of RA inhibiting IgE synthesis (10(-10) mol/L) affected neither B-cell proliferation nor the production of IgA, IgG, and IgM. 1 Low low VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 RA RA PROPN NNP Number=Sing _ _ _ _ 5 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 6 IgE Ige ADJ JJ Degree=Pos _ _ _ _ 7 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 (- (- PUNCT . _ _ _ _ SpaceAfter=No 11 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 mol/L mol/l NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 neither neither DET DT _ _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 21 nor nor CCONJ CC _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 production production NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 IgA IgA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 IgG IgG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 IgM IgM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11270 # text = Elucidation of the mechanism involved in this inhibition of IgE production shows that epsilon germline transcription is decreased by RA, whereas production of interferon-gamma (IFN-gamma) was not enhanced in the presence of RA. 1 Elucidation Elucidation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 5 involved involve ADJ JJ Degree=Pos _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 IgE Ige ADJ JJ Degree=Pos _ _ _ _ 11 production production NOUN NN Number=Sing _ _ _ _ 12 shows show VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 14 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 15 germline germline NOUN NN Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 whereas whereas SCONJ IN _ _ _ _ _ 23 production production NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 interferon interferon ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 gamma gamma NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 34 not not PART RB _ _ _ _ _ 35 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 presence presence NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 11271 # text = To differentiate whether the RA effect was mediated by RA receptors alpha, beta, and gamma, the expression of the retinoic acid receptors (RAR) was examined by reverse transcriptase-polymerase chain reaction (RT-PCR). 1 To to PART TO _ _ _ _ _ 2 differentiate differentiate VERB VB VerbForm=Inf _ _ _ _ 3 whether whether SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 RA RA PROPN NNP Number=Sing _ _ _ _ 6 effect effect NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 RA RA PROPN NNP Number=Sing _ _ _ _ 11 receptors receptor NOUN NNS Number=Plur _ _ _ _ 12 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 24 acid acid NOUN NN Number=Sing _ _ _ _ 25 receptors receptor NOUN NNS Number=Plur _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 RAR RAR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 reverse reverse NOUN NN Number=Sing _ _ _ _ 33 transcriptase transcriptase NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 36 chain chain NOUN NN Number=Sing _ _ _ _ 37 reaction reaction NOUN NN Number=Sing _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 RT-PCR RT-PCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 11272 # text = The data show that unstimulated human peripheral B cells express mRNA of the RA receptor alpha, beta, and gamma. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 express express ADJ JJ Degree=Pos _ _ _ _ 11 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 RA RA PROPN NNP Number=Sing _ _ _ _ 15 receptor receptor NOUN NN Number=Sing _ _ _ _ 16 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 11273 # text = Using retinoids with different receptor binding specificity (CD336, CD437, CD2019, CD367), dose-dependent inhibition of IgE synthesis was shown by all four derivates, but was most marked by an RA binding the alpha receptor with high specificity. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 retinoids retinoid NOUN NNS Number=Plur _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 different different ADJ JJ Degree=Pos _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ _ 6 binding binde VERB VBG VerbForm=Ger _ _ _ _ 7 specificity specificity NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 CD336 CD336 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 CD437 CD437 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 CD2019 Cd2019 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 CD367 CD367 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 21 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 IgE IgE PROPN NNP Number=Sing _ _ _ _ 24 synthesis synthesis PROPN NNP Number=Sing _ _ _ _ 25 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 26 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 all all DET DT _ _ _ _ _ 29 four four NUM CD NumType=Card _ _ _ _ 30 derivates derivate NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 but but CCONJ CC _ _ _ _ _ 33 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 34 most most ADV RBS _ _ _ _ _ 35 marked mark VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 RA Ra NOUN NN Number=Sing _ _ _ _ 39 binding bind VERB VBG VerbForm=Ger _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 alpha alpha NOUN NN Number=Sing _ _ _ _ 42 receptor receptor NOUN NN Number=Sing _ _ _ _ 43 with with ADP IN _ _ _ _ _ 44 high high ADJ JJ Degree=Pos _ _ _ _ 45 specificity specificity NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 11274 # text = Taken together, this study shows that RA inhibits 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 study study NOUN NN Number=Sing _ _ _ _ 6 shows show VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 RA RA PROPN NNP Number=Sing _ _ _ _ 9 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ # sent_id = 11275 # text = IgE production of anti-CD40 + IL-4-stimulated B cells in vitro. 1 IgE Ige ADJ JJ Degree=Pos _ _ _ _ 2 production production NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 anti-CD40 anti-CD40 NUM CD NumType=Card _ _ _ _ 5 + + SYM SYM _ _ _ _ _ 6 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 B b ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 11276 # text = Copyright 1998 by The American Society of Hematology. 1 Copyright copyright NOUN NN Number=Sing _ _ _ _ 2 1998 1998 NUM CD NumType=Card _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 The the DET DT Definite=Def|PronType=Art _ _ _ _ 5 American american ADJ JJ Degree=Pos _ _ _ _ 6 Society Society NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Hematology Hematology NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11277 # text = Document 0030012523 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012523 0030012523 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11278 # text = Interferons inhibit activation of STAT6 by interleukin 4 in human monocytes by inducing SOCS-1 gene expression. 1 Interferons Interferon NOUN NNS Number=Plur _ _ _ _ 2 inhibit inhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 STAT6 STAT6 NUM CD NumType=Card _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 interleukin interleukin ADV RB _ _ _ _ _ 8 4 4 NUM CD NumType=Card _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 12 by by SCONJ IN _ _ _ _ _ 13 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 14 SOCS SOCS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11279 # text = Interferons (IFNs) inhibit induction by IL-4 of multiple genes in human monocytes. 1 Interferons Interferon NOUN NNS Number=Plur _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 IFNs IFNs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 inhibit inhibit NOUN NN Number=Sing _ _ _ _ 6 induction induction NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 4 4 NUM CD NumType=Card _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 11280 # text = However, the mechanism by which IFNs mediate this inhibition has not been defined. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 IFNs IFNs PROPN NNPS Number=Plur _ _ _ _ 8 mediate mediate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 10 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 11 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 14 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 11281 # text = IL-4 activates gene expression by inducing tyrosine phosphorylation, homodimerization, and nuclear translocation of the latent transcription factor, STAT6 (signal transducer and activator of transcription-6). 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ _ 4 activates activate NOUN NNS Number=Plur _ _ _ _ 5 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 by by SCONJ IN _ _ _ _ _ 8 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 9 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 10 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 homodimerization homodimerization NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 translocation translocation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 latent latent ADJ JJ Degree=Pos _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 STAT6 Stat6 NUM CD NumType=Card _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 signal signal NOUN NN Number=Sing _ _ _ _ 26 transducer transducer NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 activator activator NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - SYM SYM _ _ _ _ SpaceAfter=No 32 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 11282 # text = STAT6-responsive elements are characteristically present in the promoters of IL-4-inducible genes. 1 STAT6 STAT6 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 -responsive -responsive ADJ JJ Degree=Pos _ _ _ _ 3 elements element NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 characteristically characteristically ADV RB _ _ _ _ _ 6 present present ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 promoters promoter NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 16 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 11283 # text = Because STAT6 activation is essential for IL-4-induced gene expression, we examined the ability of type I and type II IFNs to regulate activation of STAT6 by IL-4 in primary human monocytes. 1 Because because SCONJ IN _ _ _ _ _ 2 STAT6 STAT6 PROPN NNP Number=Sing _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 essential essential ADJ JJ Degree=Pos _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 16 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 ability ability NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 type type NOUN NN Number=Sing _ _ _ _ 21 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 type type VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 II ii NUM CD NumType=Card _ _ _ _ 25 IFNs IFN NOUN NNS Number=Plur _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 STAT6 STAT6 PROPN NNP Number=Sing _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 4 4 NUM CD NumType=Card _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 primary primary ADJ JJ Degree=Pos _ _ _ _ 37 human human ADJ JJ Degree=Pos _ _ _ _ 38 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 11284 # text = Pretreatment of monocytes with IFN-beta or IFN-gamma, but not IL-1, IL-2, macrophage colony-stimulating factor, granulocyte/macrophage colony-stimulating factor, IL-6, or transforming growth factor beta suppressed activation of STAT6 by IL-4. 1 Pretreatment Pretreatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 beta beta NOUN NN Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 not not ADV RB _ _ _ _ _ 15 IL Il ADV RB _ _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 24 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 / / PUNCT , _ _ _ _ SpaceAfter=No 31 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 32 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 or or CCONJ CC _ _ _ _ _ 42 transforming transform VERB VBG VerbForm=Ger _ _ _ _ 43 growth growth NOUN NN Number=Sing _ _ _ _ 44 factor factor NOUN NN Number=Sing _ _ _ _ 45 beta beof NOUN NN Number=Sing _ _ _ _ 46 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 activation activation NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 STAT6 STAT6 PROPN NNP Number=Sing _ _ _ _ 50 by by ADP IN _ _ _ _ _ 51 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 11285 # text = This inhibition was associated with decreased tyrosine phosphorylation and nuclear translocation of STAT6 and was not evident unless the cells were preincubated with IFN for at least 1 hr before IL-4 stimulation. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 8 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 translocation translocation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 STAT6 Stat6 PROPN NNP Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 evident evident ADJ JJ Degree=Pos _ _ _ _ 18 unless unless SCONJ IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 preincubated preincubate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 IFN Ifn PROPN NNP Number=Sing _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 at at ADV RB _ _ _ _ _ 27 least least ADV RBS Degree=Sup _ _ _ _ 28 1 1 NUM CD NumType=Card _ _ _ _ 29 hr hr NOUN NN Number=Sing _ _ _ _ 30 before before ADP IN _ _ _ _ _ 31 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 4 4 NUM CD NumType=Card _ _ _ _ 34 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 11286 # text = Furthermore, inhibition by IFN could be blocked by cotreatment with actinomycin D and correlated temporally with induction of the JAK/STAT inhibitory gene, SOCS-1. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 inhibition inhibition NOUN NN Number=Sing|Typo=Yes _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 IFN IFN PROPN NNP Number=Sing _ _ _ _ 6 could could AUX MD VerbForm=Fin _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 cotreatment cotreatment NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 actinomycin actinomycin NOUN NN Number=Sing _ _ _ _ 13 D d NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 temporally temporally ADV RB _ _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 induction induction NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 JAK JAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 / / PUNCT , _ _ _ _ SpaceAfter=No 23 STAT Stat PROPN NNP Number=Sing _ _ _ _ 24 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 SOCS SOCS NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 11287 # text = Forced expression of SOCS-1 in a macrophage cell line, RAW264, markedly suppressed trans-activation of an IL-4-inducible reporter as well as IL-6- and IFN-gamma-induced reporter gene activity. 1 Forced forced ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 SOCS SOCS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 RAW264 RAW264 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 markedly markedly ADV RB _ _ _ _ _ 16 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 trans- trans- SYM NFP _ _ _ _ SpaceAfter=No 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 26 reporter reporter NOUN NN Number=Sing _ _ _ _ 27 as as ADV RB _ _ _ _ _ 28 well well ADV RB Degree=Pos _ _ _ _ 29 as as ADP IN _ _ _ _ _ 30 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 -gamma -gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 reporter reporter NOUN NN Number=Sing _ _ _ _ 40 gene gene NOUN NN Number=Sing _ _ _ _ 41 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 11288 # text = These findings demonstrate that IFNs inhibit IL-4-induced activation of STAT6 and STAT6-dependent gene expression, at least in part, by inducing expression of SOCS-1. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 IFNs IFNs PROPN NNPS Number=Plur _ _ _ _ 6 inhibit inhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - SYM SYM _ _ _ _ SpaceAfter=No 9 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 -induced -induced ADJ JJ Degree=Pos _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 STAT6 Stat6 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 STAT6 Stat6 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 at at ADV RB _ _ _ _ _ 22 least least ADV RBS Degree=Sup _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 part part NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 by by SCONJ IN _ _ _ _ _ 27 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 SOCS SOCS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11289 # text = Document 0030012536 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012536 0030012536 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11290 # text = Regulation of IkB alpha phosphorylation by PKC- and Ca(2+)-dependent signal transduction pathways. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 IkB IkB PROPN NNP Number=Sing _ _ _ _ 4 alpha alpha NOUN NN Number=Sing _ _ _ _ 5 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 Ca ca PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 +) +) SYM NFP _ _ _ _ SpaceAfter=No 14 - - SYM SYM _ _ _ _ SpaceAfter=No 15 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 16 signal signal NOUN NN Number=Sing _ _ _ _ 17 transduction transduction NOUN NN Number=Sing _ _ _ _ 18 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11291 # text = The Ca(2+)-dependent phosphatase calcineurin, a target of FK506 and CsA, synergizes with PKC-induced activation of nuclear factor (NF)-kappa B in T cell lines. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Ca ca NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 +) +) SYM NFP _ _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 8 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 9 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 target target NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 FK506 FK506 PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 synergizes synergize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 26 factor factor NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappa kappa NOUN NN Number=Sing _ _ _ _ 32 B b NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 T t PROPN NNP Number=Sing _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ _ 36 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 11292 # text = We have investigated whether this synergy is present in other cell types and the mechanism(s) by which these two pathways lead to NF-kappa B activation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 whether whether SCONJ IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 synergy synergy NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 present present ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 other other ADJ JJ Degree=Pos _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 types type NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 s s X AFX _ _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 which which PRON WDT PronType=Rel _ _ _ _ 21 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 22 two two NUM CD NumType=Card _ _ _ _ 23 pathways pathway NOUN NNS Number=Plur _ _ _ _ 24 lead lead VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11293 # text = While this synergy is present in other cell types, in the monocytic cell line U937 calcineurin is also sufficient to activate NF-kappa B. 1 While while SCONJ IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 synergy synergy NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 present present ADJ JJ Degree=Pos _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 other other ADJ JJ Degree=Pos _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 line line NOUN NN Number=Sing _ _ _ _ 16 U937 U937 NUM CD NumType=Card _ _ _ _ 17 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 also also ADV RB _ _ _ _ _ 20 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 activate activate VERB VB VerbForm=Inf _ _ _ _ 23 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 11294 # text = Having previously shown that Ca(2+)- and PKC-dependent pathways synergize by accelerating the degradation of IkB alpha, we focused on the regulation of IkB alpha phosphorylation. 1 Having have VERB VBG VerbForm=Ger _ _ _ _ 2 previously previously ADV RB _ _ _ _ _ 3 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Ca ca PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 +) +) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 PKC Pkc NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 14 pathways pathway NOUN NNS Number=Plur _ _ _ _ 15 synergize synergize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 by by SCONJ IN _ _ _ _ _ 17 accelerating accelerat VERB VBG VerbForm=Ger _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 degradation degradation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 IkB IkB PROPN NNP Number=Sing _ _ _ _ 22 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 25 focused focus VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 regulation regulation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 IkB Ikb PROPN NNP Number=Sing _ _ _ _ 31 alpha alpha ADP IN _ _ _ _ _ 32 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 11295 # text = While PKC-dependent pathways sequentially result in the phosphorylation and in an incomplete degradation of IkB alpha in T cell lines, co-activation of Ca(2+)-dependent pathways accelerates the rate of IkB alpha phosphorylation and results in its complete degradation. 1 While while SCONJ IN _ _ _ _ _ 2 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 5 pathways pathway NOUN NNS Number=Plur _ _ _ _ 6 sequentially sequentially ADV RB _ _ _ _ _ 7 result result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 incomplete incomplete ADJ JJ Degree=Pos _ _ _ _ 15 degradation degradation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 IkB Ikb PROPN NNP Number=Sing _ _ _ _ 18 alpha alpha PROPN NNP Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 co-activation co-activation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 Ca ca PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 +) +) SYM NFP _ _ _ _ SpaceAfter=No 30 - - SYM SYM _ _ _ _ SpaceAfter=No 31 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 32 pathways pathway NOUN NNS Number=Plur _ _ _ _ 33 accelerates accelerate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 rate rate NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 IkB Ikb PROPN NNP Number=Sing _ _ _ _ 38 alpha alpha NOUN NN Number=Sing _ _ _ _ 39 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 results result NOUN NNS Number=Plur _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 44 complete complete ADJ JJ Degree=Pos _ _ _ _ 45 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 11296 # text = Activation of Ca(2+)-dependent pathways alone do not result in the phosphorylation and/or degradation of IkB alpha in Jurkat T or in U937 cells. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Ca ca PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 +) +) SYM NFP _ _ _ _ SpaceAfter=No 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 9 pathways pathway NOUN NNS Number=Plur _ _ _ _ 10 alone alone ADV RB _ _ _ _ _ 11 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 result result VERB VB VerbForm=Inf _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ SpaceAfter=No 18 / / PUNCT , _ _ _ _ SpaceAfter=No 19 or or CCONJ CC _ _ _ _ _ 20 degradation degradation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 IkB IkB PROPN NNP Number=Sing _ _ _ _ 23 alpha alpha PROPN NNP Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 26 T T PROPN NNP Number=Sing _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 U937 U937 NUM CD NumType=Card _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11297 # text = Treatment of T cells with the selective PKC inhibitor GF109203X abrogates the PMA-induced 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 selective selective ADJ JJ Degree=Pos _ _ _ _ 8 PKC Pkc NOUN NN Number=Sing _ _ _ _ 9 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 10 GF gf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 109203X 109203X PROPN NNP Number=Sing _ _ _ _ 12 abrogates abrogate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 PMA Pma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ # sent_id = 11298 # text = IkB alpha phosphorylation/degradation irrespective of activation of Ca(2+)-dependent pathways, but not the phosphorylation and degradation of IkB alpha induced by TNF-alpha, a PKC-independent stimulus. 1 IkB Ikb X LS _ _ _ _ _ 2 alpha alpha X FW Foreign=Yes _ _ _ _ 3 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 / / PUNCT , _ _ _ _ SpaceAfter=No 5 degradation degradation NOUN NN Number=Sing _ _ _ _ 6 irrespective irrespective ADJ JJ Degree=Pos _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 Ca ca PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 +) +) SYM NFP _ _ _ _ SpaceAfter=No 14 - - SYM SYM _ _ _ _ SpaceAfter=No 15 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 16 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 but but CCONJ CC _ _ _ _ _ 19 not not ADV RB _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 degradation degradation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 IkB Ikb PROPN NNP Number=Sing _ _ _ _ 26 alpha alpha NOUN NN Number=Sing _ _ _ _ 27 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 PKC Pkc NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 independent independent ADJ JJ Degree=Pos _ _ _ _ 37 stimulus stimulus NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 11299 # text = Contrary to the interaction with PKC, Ca(2+)-dependent pathways synergize with TNF-alpha not at the level of IkB alpha phosphorylation, but at the level of its degradation. 1 Contrary contrary ADJ JJ Degree=Pos _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 interaction interaction NOUN NN Number=Sing _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 Ca ca PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 +) +) SYM NFP _ _ _ _ SpaceAfter=No 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 14 pathways pathway NOUN NNS Number=Plur _ _ _ _ 15 synergize synergize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 alpha alpha PROPN NNP Number=Sing _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 at at ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 level level NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 IkB Ikb PROPN NNP Number=Sing _ _ _ _ 26 alpha alpha ADP IN _ _ _ _ _ 27 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 but but CCONJ CC _ _ _ _ _ 30 at at ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 level level NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 35 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 11300 # text = These results indicate that Ca(2+)-dependent pathways, including the phosphatase calcineurin, participate in the regulation of NF-kappa B in a cell specific fashion and synergize with PKC-dependent and -independent pathways at the level of IkB alpha phosphorylation and degradation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Ca ca PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 +) +) SYM NFP _ _ _ _ SpaceAfter=No 9 - - SYM SYM _ _ _ _ SpaceAfter=No 10 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 11 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 including include VERB VBG VerbForm=Ger _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 16 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 participate participate VERB VB VerbForm=Inf _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 regulation regulation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 specific specific ADJ JJ Degree=Pos _ _ _ _ 31 fashion fashion NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 synergize synergize NOUN NN Number=Sing _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 independent independent ADJ JJ Degree=Pos _ _ _ _ 41 pathways pathway NOUN NNS Number=Plur _ _ _ _ 42 at at ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 level level NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 IkB Ikb PROPN NNP Number=Sing _ _ _ _ 47 alpha alpha ADP IN _ _ _ _ _ 48 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11301 # text = Document 0030012539 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012539 0030012539 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11302 # text = Protein kinase C is not a downstream effector of p21ras in activated T cells. 1 Protein protein NOUN NN Number=Sing _ _ _ _ 2 kinase kinase NOUN NN Number=Sing _ _ _ _ 3 C C PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 8 effector effector NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 p21ras p21ra NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11303 # text = The aim of this present study was to investigate the role of protein kinase C (PKC), downstream of p21ras, in activating interleukin-2 (IL-2) gene expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 aim aim NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 present present ADJ JJ Degree=Pos _ _ _ _ 6 study study NOUN NN Number=Sing _ _ _ _ 7 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 kinase kinase NOUN NN Number=Sing _ _ _ _ 15 C C PROPN NNP Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 p21ras p21ra NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 in in SCONJ IN _ _ _ _ _ 25 activating activat VERB VBG VerbForm=Ger _ _ _ _ 26 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 gene gene NOUN NN Number=Sing _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 11304 # text = It has been reported that PKC is an effector of p21ras in T cells. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 4 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 PKC PKC PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 effector effector NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 p21ras p21ra NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 11305 # text = Data is presented, using the potent and selective PKC inhibitor Ro 31-8425 and transient expression of a constitutively active ras mutant, which clearly shows that PKC is not downstream of p21ras in the induction of NF-AT and AP-1 transcriptional activity and in the expression of IL-2 in human Jurkat T cells. 1 Data data PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 presented present VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 using use VERB VBG VerbForm=Ger _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 potent potent NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 selective selective ADJ JJ Degree=Pos _ _ _ _ 10 PKC Pkc PROPN NNP Number=Sing _ _ _ _ 11 inhibitor inhibitor ADP IN _ _ _ _ _ 12 Ro Ro PROPN NNP Number=Sing _ _ _ _ 13 31- 31- SYM SYM _ _ _ _ SpaceAfter=No 14 8425 8425 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 transient transient ADJ JJ Degree=Pos _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 constitutively constitutively ADV RB _ _ _ _ _ 21 active active ADJ JJ Degree=Pos _ _ _ _ 22 ras ra NOUN NNS Number=Plur _ _ _ _ 23 mutant mutant NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 which which PRON WDT PronType=Rel _ _ _ _ 26 clearly clearly ADV RB _ _ _ _ _ 27 shows show VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 that that SCONJ IN _ _ _ _ _ 29 PKC PKC PROPN NNP Number=Sing _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 not not PART RB _ _ _ _ _ 32 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 p21ras p21ra NOUN NNS Number=Plur _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 induction induction NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 AT at PROPN NNP Number=Sing _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 1 1 NUM CD NumType=Card _ _ _ _ 46 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 47 activity activity NOUN NN Number=Sing _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 in in ADP IN _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 expression expression NOUN NN Number=Sing _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 2 2 NUM CD NumType=Card _ _ _ _ 56 in in ADP IN _ _ _ _ _ 57 human human ADJ JJ Degree=Pos _ _ _ _ 58 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 59 T t PROPN NNP Number=Sing _ _ _ _ 60 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ _ # sent_id = 11306 # text = Reporter gene experiments demonstrated that NF-kappa B transcriptional activity is not affected by expression of activated p21ras. 1 Reporter reporter NOUN NN Number=Sing _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ _ 4 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B b PROPN NNP Number=Sing _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 p21ras p21ra NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 11307 # text = The signaling pathways involving PKC activation, calcium mobilization and ras activation combine to provide the necessary components for production of IL-2 during T cell activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 signaling signaling NOUN NN Number=Sing _ _ _ _ 3 pathways pathway NOUN NNS Number=Plur _ _ _ _ 4 involving involve VERB VBG VerbForm=Ger _ _ _ _ 5 PKC Pkc PROPN NNP Number=Sing _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 calcium calcium NOUN NN Number=Sing _ _ _ _ 9 mobilization mobilization NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 ras ras NOUN NN Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 combine combine NOUN NN Number=Sing _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 provide provide VERB VB VerbForm=Inf _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 18 components component NOUN NNS Number=Plur _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 production production NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 during during ADP IN _ _ _ _ _ 26 T t NUM CD NumType=Card _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11308 # text = Document 0030012541 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012541 0030012541 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11309 # text = Involvement of mitogen-activated protein kinase pathways in interleukin-8 production by human monocytes and polymorphonuclear cells stimulated with lipopolysaccharide or Mycoplasma fermentans membrane lipoproteins. 1 Involvement involvement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 mitogen mitogen NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT : _ _ _ _ SpaceAfter=No 5 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 pathways pathway NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 8 8 NUM CD NumType=Card _ _ _ _ 13 production production NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 polymorphonuclear polymorphonuclear ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 Mycoplasma Mycoplasma PROPN NNP Number=Sing _ _ _ _ 25 fermentans fermentan VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 membrane membrane NOUN NN Number=Sing _ _ _ _ 27 lipoproteins. lipoprotein. NOUN NN Number=Sing _ _ _ SpacesAfter=\s\n # sent_id = 11310 # text = Interleukin-8 (IL-8) is a chemokine that belongs to the alpha-chemokine or CXC subfamily and is produced by a wide variety of human cells, including monocytes and polymorphonuclear cells (PMN). 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 8 8 PROPN NNP Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 8 8 X LS _ _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 chemokine chemokine NOUN NN Number=Sing _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 belongs belong VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 chemokine chemokine NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 CXC CXC PROPN NNP Number=Sing _ _ _ _ 21 subfamily subfamily ADV RB _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 produced produce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 wide wide ADJ JJ Degree=Pos _ _ _ _ 28 variety variety NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 including include VERB VBG VerbForm=Ger _ _ _ _ 34 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 polymorphonuclear polymorphonuclear ADJ JJ Degree=Pos _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 PMN PMN NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 11311 # text = IL-8 is secreted in response to inflammatory stimuli, notably bacterial products such as lipopolysaccharide (LPS), but little is known about the mechanisms by which these agents mediate IL-8 induction. 1 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 8 8 PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 secreted secret VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 response response NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 10 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 notably notably ADV RB _ _ _ _ _ 13 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 14 products product NOUN NNS Number=Plur _ _ _ _ 15 such such ADJ JJ Degree=Pos _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 LPS LPS INTJ UH _ _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 little little ADJ JJ Degree=Pos _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 about about ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 mechanisms mechanisms NOUN NNS Number=Plur _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 which which PRON WDT PronType=Rel _ _ _ _ 31 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 32 agents agent NOUN NNS Number=Plur _ _ _ _ 33 mediate mediate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 8 8 NUM CD NumType=Card _ _ _ _ 37 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 11312 # text = In this report, we show that Mycoplasma fermentans lipid-associated membrane proteins (LAMPf) induce the production of high levels of IL-8 by THP-1 (human monocyte) cells and PMN at the same extent as LPS. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 Mycoplasma Mycoplasma PROPN NNP Number=Sing _ _ _ _ 9 fermentans fermentan VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 lipid-associated lipid-associated ADJ JJ Degree=Pos _ _ _ _ 11 membrane membrane NOUN NN Number=Sing _ _ _ _ 12 proteins protein NOUN NNS Number=Plur _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 LAMPf LAMPf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 induce induce VERB VB VerbForm=Inf _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 production production NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 high high ADJ JJ Degree=Pos _ _ _ _ 21 levels level NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 8 8 NUM CD NumType=Card _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 THP THP NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 human human ADJ JJ Degree=Pos _ _ _ _ 32 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 PMN Pmn NOUN NN Number=Sing _ _ _ _ 37 at at ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 same same ADJ JJ Degree=Pos _ _ _ _ 40 extent extent NOUN NN Number=Sing _ _ _ _ 41 as as ADP IN _ _ _ _ _ 42 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 11313 # text = It was previously demonstrated that stimulation of monocytic cells with either LPS or LAMPf led to a series of common downstream signaling events, including the activation of protein tyrosine kinase and of mitogen-activated protein kinase cascades. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 either either CCONJ CC _ _ _ _ _ 12 LPS LPS PROPN NNP Number=Sing _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 LAMPf LAMPf PROPN NNP Number=Sing _ _ _ _ 15 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 series series NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 common common ADJ JJ Degree=Pos _ _ _ _ 21 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 22 signaling signale NOUN NN Number=Sing _ _ _ _ 23 events event NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 including include VERB VBG VerbForm=Ger _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ _ 30 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 31 kinase kinase NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 mitogen mitogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 protein protein NOUN NN Number=Sing _ _ _ _ 38 kinase kinase NOUN NN Number=Sing _ _ _ _ 39 cascades cascade NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 11314 # text = By using PD-98059 and SB203580, two potent and selective inhibitors of MEK1 (a kinase upstream of ERK1/2) and p38, respectively, we have demonstrated that both ERK1/2 and p38 cascades play a key role in the production of IL-8 by monocytes and PMN stimulated with bacterial fractions. 1 By by SCONJ IN _ _ _ _ _ 2 using use VERB VBG VerbForm=Ger _ _ _ _ 3 PD PD NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 98059 98059 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 SB Sb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 203580 203580 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 two two NUM CD NumType=Card _ _ _ _ 11 potent potent NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 selective selective ADJ JJ Degree=Pos _ _ _ _ 14 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 MEK1 MEK1 PROPN NNP Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 kinase kinase NOUN NN Number=Sing _ _ _ _ 20 upstream upstream NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 ERK ERK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 1/2 1/2 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 p38 p38 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 31 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 32 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 that that SCONJ IN _ _ _ _ _ 34 both both DET DT _ _ _ _ _ 35 ERK ERK NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 1/ 1/ PUNCT HYPH _ _ _ _ SpaceAfter=No 37 2 2 NUM CD NumType=Card _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 p38 p38 NUM CD NumType=Card _ _ _ _ 40 cascades cascade NOUN NNS Number=Plur _ _ _ _ 41 play play VERB VB VerbForm=Inf _ _ _ _ 42 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 key key ADJ JJ Degree=Pos _ _ _ _ 44 role role NOUN NN Number=Sing _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 production production NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT , _ _ _ _ SpaceAfter=No 51 8 8 NUM CD NumType=Card _ _ _ _ 52 by by ADP IN _ _ _ _ _ 53 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 54 and and CCONJ CC _ _ _ _ _ 55 PMN Pmn NOUN NN Number=Sing _ _ _ _ 56 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 57 with with ADP IN _ _ _ _ _ 58 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 59 fractions fraction NOUN NNS Number=Plur _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11315 # text = Document 0030012543 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012543 0030012543 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11316 # text = Interleukin-10 and transforming growth factor-beta promoter polymorphisms in allergies and asthma. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 10 10 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 transforming transform VERB VBG VerbForm=Ger _ _ _ _ 6 growth growth NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 beta beta NOUN NN Number=Sing _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 polymorphisms polymorphism NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 allergies allergy NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 asthma asthma NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11317 # text = Interleukin-10 (IL-10) and transforming growth factor beta (TGF-beta) are inhibitory for B and T cells, IgE production, and mast cell proliferation, and they induce apoptosis in eosinophils. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -10 -10 NUM CD NumType=Card _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 transforming transform VERB VBG VerbForm=Ger _ _ _ _ 10 growth growth NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 beta beta NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 TGF Tgf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 B b PROPN NNP Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 IgE Ige PROPN NNP Number=Sing _ _ _ _ 27 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 mast mast ADJ JJ Degree=Pos _ _ _ _ 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 36 induce induce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 37 apoptosis apoptosis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 11318 # text = These cytokines are therefore candidate genes which could contribute to the development of asthma or allergies. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 therefore therefore ADV RB _ _ _ _ _ 5 candidate candidate NOUN NN Number=Sing _ _ _ _ 6 genes gene NOUN NNS Number=Plur _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 could could AUX MD VerbForm=Fin _ _ _ _ 9 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 development development NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 asthma asthma NOUN NN Number=Sing _ _ _ _ 15 or or CCONJ CC _ _ _ _ _ 16 allergies allergy NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 11319 # text = We investigated the hypothesis that polymorphic nucleotides within the IL-10 and TGF-beta gene promoters would link to the expression of allergies and asthma. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 polymorphic polymorphic ADJ JJ Degree=Pos _ _ _ _ 7 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 8 within within ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 10 10 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 TGF Tgf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 beta beta NOUN NN Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 promoters promoter NOUN NNS Number=Plur _ _ _ _ 19 would would AUX MD VerbForm=Fin _ _ _ _ 20 link link VERB VB VerbForm=Inf _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 allergies allergy NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 asthma asthma NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 11320 # text = DNA taken from families with an asthmatic proband was examined for base exchanges by single-stranded conformational polymorphism (SSCP). 1 DNA dna NOUN NN Number=Sing _ _ _ _ 2 taken take VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 families family NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 asthmatic asthmatic ADJ JJ Degree=Pos _ _ _ _ 8 proband proband NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 base base NOUN NN Number=Sing _ _ _ _ 13 exchanges exchange NOUN NNS Number=Plur _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 single single ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 stranded strand VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 conformational conformational ADJ JJ Degree=Pos _ _ _ _ 19 polymorphism polymorphism NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 SSCP SSCP NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 11321 # text = We demonstrated the presence of a polymorphism in the promoter region of the IL-10 gene and four in the TGF-beta gene promoters (3 in TGF-beta1 and 1 in TGF-beta2). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 presence presence NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 polymorphism polymorphism NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 region region NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 10 10 NUM CD NumType=Card _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 four four NUM CD NumType=Card _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 TGF Tgf NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 beta beta NOUN NN Number=Sing _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 promoters promoter NOUN NNS Number=Plur _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 3 3 NUM CD NumType=Card _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 beta1 beta1 NUM CD NumType=Card _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 1 1 NUM CD NumType=Card _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - SYM SYM _ _ _ _ SpaceAfter=No 38 beta2 beta2 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 11322 # text = The IL-10 gene polymorphism was a C-to-A exchange 571 base pairs upstream from the translation start site and was present between consensus binding sequences for Sp1 and elevated total serum. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 10 10 NUM CD NumType=Card _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 polymorphism polymorphism NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 C c NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 to to ADP IN _ _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 A a NOUN NN Number=Sing _ _ _ _ 14 exchange exchange NOUN NN Number=Sing _ _ _ _ 15 571 571 NUM CD NumType=Card _ _ _ _ 16 base base NOUN NN Number=Sing _ _ _ _ 17 pairs pair NOUN NNS Number=Plur _ _ _ _ 18 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 translation translation NOUN NN Number=Sing _ _ _ _ 22 start start NOUN NN Number=Sing _ _ _ _ 23 site site NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 26 present present ADJ JJ Degree=Pos _ _ _ _ 27 between between ADP IN _ _ _ _ _ 28 consensus consensus NOUN NN Number=Sing _ _ _ _ 29 binding bind VERB VBG VerbForm=Ger _ _ _ _ 30 sequences sequence NOUN NNS Number=Plur _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 total total ADJ JJ Degree=Pos _ _ _ _ 36 serum serum NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 11323 # text = This polymorphism was associated with elevated total serum IgE in subjects heterozygotic or homozygotic for this base exchange (p < 0.009). 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 polymorphism polymorphism NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 total total ADJ JJ Degree=Pos _ _ _ _ 8 serum serum NOUN NN Number=Sing _ _ _ _ 9 IgE Ige NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 subjects subject NOUN NNS Number=Plur _ _ _ _ 12 heterozygotic heterozygotic ADJ JJ Degree=Pos _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 homozygotic homozygotic ADJ JJ Degree=Pos _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 17 base base NOUN NN Number=Sing _ _ _ _ 18 exchange exchange NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 p p NOUN NN Number=Sing _ _ _ _ 21 < < PUNCT -LRB- _ _ _ _ _ 22 0.009 0.009 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 11324 # text = The base exchange at -509 (from the transcription initiation site) in the TGF-beta promoter also linked to elevated total IgE (p < 0.01). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 base base NOUN NN Number=Sing _ _ _ _ 3 exchange exchange NOUN NN Number=Sing _ _ _ _ 4 at at ADP IN _ _ _ _ _ 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 509 509 NUM CD NumType=Card _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 from from ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 initiation initiation NOUN NN Number=Sing _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 TGF Tgf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 beta beta NOUN NN Number=Sing _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 also also ADV RB _ _ _ _ _ 21 linked link VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 total total ADJ JJ Degree=Pos _ _ _ _ 25 IgE Ige NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 p p NOUN NN Number=Sing _ _ _ _ 28 < < PUNCT -LRB- _ _ _ _ _ 29 0.01 0.01 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11325 # text = This polymorphism represented a C-to-T base exchange which induced a YY1 consensus sequence and is present in a region of the promoter associated with negative transcription regulation. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 polymorphism polymorphism NOUN NN Number=Sing _ _ _ _ 3 represented represent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 to to PART TO _ _ _ _ SpaceAfter=No 8 -T -t VERB VB VerbForm=Inf _ _ _ _ 9 base base NOUN NN Number=Sing _ _ _ _ 10 exchange exchange NOUN NN Number=Sing _ _ _ _ 11 which which PRON WDT PronType=Rel _ _ _ _ 12 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 YY1 YY1 NUM CD NumType=Card _ _ _ _ 15 consensus consensus NOUN NN Number=Sing _ _ _ _ 16 sequence sequence NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 present present ADJ JJ Degree=Pos _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 region region NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ _ 26 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 negative negative ADJ JJ Degree=Pos _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11326 # text = Document 0030012546 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012546 0030012546 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11327 # text = Nuclear accumulation of NFAT4 opposed by the JNK signal transduction pathway. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NFAT4 NFAT4 PROPN NNP Number=Sing _ _ _ _ 5 opposed oppose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 JNK JNK PROPN NNP Number=Sing _ _ _ _ 9 signal signal NOUN NN Number=Sing _ _ _ _ 10 transduction transduction NOUN NN Number=Sing _ _ _ _ 11 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11328 # text = The nuclear factor of activated T cells (NFAT) group of transcription factors is retained in the cytoplasm of quiescent cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 T T PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 group group NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factors factor NOUN NNS Number=Plur _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 retained retain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 quiescent quiescent ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 11329 # text = NFAT activation is mediated in part by induced nuclear import. 1 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 part part NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 import import NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 11330 # text = This process requires calcium-dependent dephosphorylation of NFAT caused by the phosphatase calcineurin. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 process process NOUN NN Number=Sing _ _ _ _ 3 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 7 dephosphorylation dephosphorylation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 10 caused cause VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 14 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 11331 # text = The c-Jun amino-terminal kinase (JNK) phosphorylates NFAT4 on two sites. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 Jun Jun PROPN NNP Number=Sing _ _ _ _ 5 amino amino NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 terminal terminal NOUN NN Number=Sing _ _ _ _ 8 kinase kinase NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 JNK JNK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 phosphorylates phosphorylate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 NFAT4 NFAT4 NUM CD NumType=Card _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 two two NUM CD NumType=Card _ _ _ _ 16 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 11332 # text = Mutational removal of the JNK phosphorylation sites caused constitutive nuclear localization of NFAT4. 1 Mutational Mutational ADJ JJ Degree=Pos _ _ _ _ 2 removal removal NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 JNK JNK PROPN NNP Number=Sing _ _ _ _ 6 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 7 sites site NOUN NNS Number=Plur _ _ _ _ 8 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 localization localization NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NFAT4 NFAT4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 11333 # text = In contrast, JNK activation in calcineurin-stimulated cells caused nuclear exclusion of NFAT4. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 JNK JNK PROPN NNP Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 calcineurin- calcineurin- SYM NFP _ _ _ _ SpaceAfter=No 8 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 exclusion exclusion NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NFAT4 NFAT4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 11334 # text = These findings show that the nuclear accumulation of NFAT4 promoted by calcineurin is opposed by the JNK signal transduction pathway. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NFAT4 NFAT4 PROPN NNP Number=Sing _ _ _ _ 10 promoted promote VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 opposed oppose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 JNK JNK PROPN NNP Number=Sing _ _ _ _ 18 signal signal NOUN NN Number=Sing _ _ _ _ 19 transduction transduction NOUN NN Number=Sing _ _ _ _ 20 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11335 # text = Document 0030012547 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012547 0030012547 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11336 # text = Stimulation of neutrophil interleukin-8 production by eosinophil granule major basic protein. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 4 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT : _ _ _ _ SpaceAfter=No 6 8 8 NUM CD NumType=Card _ _ _ _ 7 production production NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 eosinophil eosinophil NOUN NN Number=Sing _ _ _ _ 10 granule granule NOUN NN Number=Sing _ _ _ _ 11 major major ADJ JJ Degree=Pos _ _ _ _ 12 basic basic ADJ JJ Degree=Pos _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11337 # text = We evaluated the ability of eosinophil granule major basic protein (MBP) to stimulate interleukin (IL)-8 production by neutrophils. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 evaluated evaluate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 ability ability NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 eosinophil eosinophil NOUN NN Number=Sing _ _ _ _ 7 granule granule NOUN NN Number=Sing _ _ _ _ 8 major major ADJ JJ Degree=Pos _ _ _ _ 9 basic basic ADJ JJ Degree=Pos _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 MBP MBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 16 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 - - SYM SYM _ _ _ _ SpaceAfter=No 21 8 8 NUM CD NumType=Card _ _ _ _ 22 production production NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 11338 # text = MBP over the concentration range of 0.1 to 10 microM stimulated the release of up to approximately 8 ng/ml IL-8. 1 MBP MBp SYM NFP _ _ _ _ _ 2 over over ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 concentration concentration NOUN NN Number=Sing _ _ _ _ 5 range range NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 0.1 0.1 NUM CD NumType=Card _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 10 10 NUM CD NumType=Card _ _ _ _ 10 microM microM PROPN NNP Number=Sing _ _ _ _ 11 stimulated stimulate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 release release NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 up up NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 approximately approximately ADV RB _ _ _ _ _ 18 8 8 NUM CD NumType=Card _ _ _ _ 19 ng/ ngith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 20 ml ml PROPN NNP Number=Sing _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 11339 # text = Incubation with 2 microM MBP showed that, after a 1 h lag, the level of IL-8 release increased with time for approximately 10 h. 1 Incubation incubation NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 2 2 NUM CD NumType=Card _ _ _ _ 4 microM microm PROPN NNP Number=Sing _ _ _ _ 5 MBP MBP PROPN NNP Number=Sing _ _ _ _ 6 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 after after ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 1 1 NUM CD NumType=Card _ _ _ _ 12 h h NOUN NN Number=Sing _ _ _ _ 13 lag lag NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 level level NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 8 8 NUM CD NumType=Card _ _ _ _ 21 release release NOUN NN Number=Sing _ _ _ _ 22 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 time time NOUN NN Number=Sing _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 approximately approximately ADV RB _ _ _ _ _ 27 10 10 NUM CD NumType=Card _ _ _ _ 28 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 11340 # text = At the 2 microM concentration, eosinophil cationic protein, eosinophil-derived neurotoxin, and eosinophil peroxidase did not stimulate significant levels of IL-8 production. 1 At at ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 2 2 NUM CD NumType=Card _ _ _ _ 4 microM microm NOUN NN Number=Sing _ _ _ _ 5 concentration concentration NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 eosinophil eosinophil VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 8 cationic cationic ADJ JJ Degree=Pos _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 eosinophil eosinophil NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 neurotoxin neurotoxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 eosinophil eosinophil NOUN NN Number=Sing _ _ _ _ 18 peroxidase peroxidase NOUN NN Number=Sing _ _ _ _ 19 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 22 significant significant ADJ JJ Degree=Pos _ _ _ _ 23 levels level NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 8 8 NUM CD NumType=Card _ _ _ _ 28 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 11341 # text = MBP stimulated 2-fold increases in IL-8 messenger RNA (mRNA) after 1 and 3 1 MBP MBp SYM NFP _ _ _ _ _ 2 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 fold fold NOUN NN Number=Sing _ _ _ _ 6 increases increase NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 8 8 NUM CD NumType=Card _ _ _ _ 11 messenger messenger NOUN NN Number=Sing _ _ _ _ 12 RNA RNA PROPN NNP Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 after after ADP IN _ _ _ _ _ 17 1 1 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 3 3 NUM CD NumType=Card _ _ _ _ # sent_id = 11342 # text = h of incubation, which were blocked by pretreatment with actinomycin D. 1 h h NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 incubation incubation NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 which which PRON WDT PronType=Rel _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 pretreatment pretreatment NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 actinomycin actinomycin ADP IN _ _ _ _ _ 12 D d PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 11343 # text = However, stimulation with MBP did not produce an increase in the binding activity of nuclear factor (NF)-kappaB or activator protein-1. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 MBP MBP PROPN NNP Number=Sing _ _ _ _ 6 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 produce produce VERB VB VerbForm=Inf _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 increase increase NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 activator activator NOUN NN Number=Sing _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 11344 # text = No NF-IL-6 binding activity was detected in the same nuclear extracts. 1 No no DET DT _ _ _ _ _ 2 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 6 6 NUM CD NumType=Card _ _ _ _ 7 binding binding VERB VBG VerbForm=Ger _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 same same ADJ JJ Degree=Pos _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 11345 # text = In addition, stimulation with MBP prolonged the stability of IL-8 mRNA. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 MBP MBP PROPN NNP Number=Sing _ _ _ _ 7 prolonged prolong VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 stability stability NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 8 8 PROPN NNP Number=Sing _ _ _ _ 14 mRNA mRNa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 11346 # text = MBP also induced transient increases in mRNA for macrophage inflammatory protein (MIP)-1alpha and MIP-1beta, but did not stimulate the release of either chemokine. 1 MBP MBp SYM NFP _ _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 transient transient ADJ JJ Degree=Pos _ _ _ _ 5 increases increase NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 macrophage macrophage ADJ JJ Degree=Pos _ _ _ _ 10 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 MIP MIP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 MIP Mip PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 not not PART RB _ _ _ _ _ 25 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 release release NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 either either DET DT _ _ _ _ _ 30 chemokine chemokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11347 # text = These findings indicate that MBP is selective among the eosinophil granule proteins as a stimulus for neutrophil IL-8 release and, further, that stimulation of neutrophil IL-8 release by MBP involves both transcriptional and posttranscriptional regulation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 MBP MBP PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 selective selective ADJ JJ Degree=Pos _ _ _ _ 8 among among ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 eosinophil eosinophil NOUN NN Number=Sing _ _ _ _ 11 granule granule NOUN NN Number=Sing _ _ _ _ 12 proteins protein NOUN NNS Number=Plur _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 stimulus stimulus NOUN NN Number=Sing _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 18 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 8 8 NUM CD NumType=Card _ _ _ _ 21 release release NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 further further ADV RB _ _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 27 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 30 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 8 8 NUM CD NumType=Card _ _ _ _ 33 release release NOUN NN Number=Sing _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 MBP MBP PROPN NNP Number=Sing _ _ _ _ 36 involves involf NOUN NNS Number=Plur _ _ _ _ 37 both both CCONJ CC _ _ _ _ _ 38 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 posttranscriptional posttranscriptional ADJ JJ Degree=Pos _ _ _ _ 41 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 11348 # text = We postulate that MBP-induced release of IL-8 by neutrophils may contribute to the pathophysiology of acute asthma and other inflammatory lung diseases. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 postulate postulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 MBP Mbp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 release release NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 8 8 NUM CD NumType=Card _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 pathophysiology pathophysiology NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 acute acute NOUN NN Number=Sing _ _ _ _ 21 asthma asthma NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 other other ADJ JJ Degree=Pos _ _ _ _ 24 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 25 lung lung NOUN NN Number=Sing _ _ _ _ 26 diseases disease NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11349 # text = Document 0030012555 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012555 0030012555 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11350 # text = Activation and expression of the nuclear factors of activated T cells, NFATp and NFATc, in human natural killer cells: regulation upon CD16 ligand binding. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 factors factor NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 NFATc NFATc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 natural natural ADJ JJ Degree=Pos _ _ _ _ 20 killer killer NOUN NN Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 : : PUNCT : _ _ _ _ _ 23 regulation regulation NOUN NN Number=Sing _ _ _ _ 24 upon upon ADP IN _ _ _ _ _ 25 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 16 16 NUM CD NumType=Card _ _ _ _ 27 ligand ligand NOUN NN Number=Sing _ _ _ _ 28 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11351 # text = The putative factors that couple the signal transduction from surface receptors to the activation of cytokine synthesis in natural killer (NK) cells have not been elucidated. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 putative putative ADJ JJ Degree=Pos _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 couple couple VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 signal signal NOUN NN Number=Sing _ _ _ _ 8 transduction transduction NOUN NN Number=Sing _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 surface surface NOUN NN Number=Sing _ _ _ _ 11 receptors receptor NOUN NNS Number=Plur _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 17 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 natural natural ADJ JJ Degree=Pos _ _ _ _ 20 killer killer NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 NK NK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 not not PART RB _ _ _ _ _ 27 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 28 elucidated elucidate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 11352 # text = We report here that the nuclear factor of activated T cells (NFATp), a cyclosporin A (CsA)-sensitive factor that regulates the transcription of several cytokines, mediates CD16-induced activation of cytokine genes in human NK cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 NFATp NFATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 18 A a PROPN NNP Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 that that PRON WDT PronType=Rel _ _ _ _ 26 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 several several ADJ JJ Degree=Pos _ _ _ _ 31 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 CD16 CD16 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 -induced -induced VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 activation activation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 39 genes gene NOUN NNS Number=Plur _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 human human ADJ JJ Degree=Pos _ _ _ _ 42 NK NK PROPN NNP Number=Sing _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 11353 # text = CD16 (Fc gamma RIIIA)-induced expression of cytokine mRNA in NK cells occurs via a CsA-sensitive and Ca(2+)-dependent mechanism. 1 CD CD NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 16 16 NUM CD NumType=Card _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 Fc Fc PROPN NNP Number=Sing _ _ _ _ 5 gamma gamma PROPN NNP Number=Sing _ _ _ _ 6 RIIIA RIIIA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 - - PUNCT : _ _ _ _ SpaceAfter=No 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 cytokine cytokine PROPN NNP Number=Sing _ _ _ _ 13 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 NK NK PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 occurs occur VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 via via ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 CsA csa NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 Ca ca PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 +) +) SYM NFP _ _ _ _ SpaceAfter=No 28 - - SYM SYM _ _ _ _ SpaceAfter=No 29 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 30 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11354 # text = Stimulation of NK cells with CD16 ligands induces NFAT-like DNA binding activity in the nuclear extracts from these cells, as detected in electrophoretic mobility shift assays. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NK NK PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 16 16 NUM CD NumType=Card _ _ _ _ 8 ligands ligand NOUN NNS Number=Plur _ _ _ _ 9 induces induce NOUN NNS Number=Plur _ _ _ _ 10 NFAT NFAT ADV RB _ _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 like like ADJ JJ Degree=Pos _ _ _ _ 13 DNA dna NOUN NN Number=Sing _ _ _ _ 14 binding binde VERB VBG VerbForm=Ger _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 extracts extract NOUN NNS Number=Plur _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 as as SCONJ IN _ _ _ _ _ 25 detected detect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 28 mobility mobility NOUN NN Number=Sing _ _ _ _ 29 shift shift NOUN NN Number=Sing _ _ _ _ 30 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11355 # text = This occurs with fast kinetics after stimulation, via a CsA-sensitive and Ca(2+)-dependent mechanism that does not require de novo protein synthesis. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 occurs occur VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 fast fast ADJ JJ Degree=Pos _ _ _ _ 5 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 6 after after ADP IN _ _ _ _ _ 7 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 via via ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 CsA csa NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 Ca ca PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 +) +) SYM NFP _ _ _ _ SpaceAfter=No 19 - - SYM SYM _ _ _ _ SpaceAfter=No 20 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 21 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 not not PART RB _ _ _ _ _ 25 require require VERB VB VerbForm=Inf _ _ _ _ 26 de de NOUN NN Number=Sing _ _ _ _ 27 novo novo NOUN NN Number=Sing _ _ _ _ 28 protein protein NOUN NN Number=Sing _ _ _ _ 29 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 11356 # text = NK cell NFAT is present in the cytosol of nonstimulated cells, migrates to the nucleus upon stimulation, and can associate with AP-1. 1 NK NK PROPN NNP Number=Sing _ _ _ _ 2 cell cell PROPN NNP Number=Sing _ _ _ _ 3 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 present present ADJ JJ Degree=Pos _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 cytosol cytosol NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 nonstimulated nonstimulate ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 migrates migrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 17 upon upon ADP IN _ _ _ _ _ 18 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 can can AUX MD VerbForm=Fin _ _ _ _ 22 associate associate VERB VB VerbForm=Inf _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 11357 # text = Two distinct molecules, NFATp and NFATc, have been reported to mediate NFAT activity. 1 Two two NUM CD NumType=Card _ _ _ _ 2 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 3 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 NFATc NFATc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 11 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 14 NFAT NFAT ADJ JJ Degree=Pos _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 11358 # text = The results of supershift assays using NFATp- and NFATc- specific antibodies indicate that NK cell activation early after CD16 ligand binding involves primarily, if not exclusively, NFATp, and Western blot analysis shows that this has the same electrophoretic mobility (approximately 120 kD) as that of T lymphocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 supershift supershift ADJ JJ Degree=Pos _ _ _ _ 5 assays assay NOUN NNS Number=Plur _ _ _ _ 6 using use VERB VBG VerbForm=Ger _ _ _ _ 7 NFATp NFATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 NFATc NFATc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ _ 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 14 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 NK NK PROPN NNP Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 early early ADV RB Degree=Pos _ _ _ _ 20 after after ADP IN _ _ _ _ _ 21 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 16 16 NUM CD NumType=Card _ _ _ _ 23 ligand ligand NOUN NN Number=Sing _ _ _ _ 24 binding bind VERB VBG VerbForm=Ger _ _ _ _ 25 involves involf NOUN NNS Number=Plur _ _ _ _ 26 primarily primarily ADV RB _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 if if SCONJ IN _ _ _ _ _ 29 not not ADV RB _ _ _ _ _ 30 exclusively exclusively ADV RB _ _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 NFATp NFATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 Western western ADJ JJ Degree=Pos _ _ _ _ 36 blot blot NOUN NN Number=Sing _ _ _ _ 37 analysis analysis NOUN NN Number=Sing _ _ _ _ 38 shows show VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 that that SCONJ IN _ _ _ _ _ 40 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 41 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 same same ADJ JJ Degree=Pos _ _ _ _ 44 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 45 mobility mobility NOUN NN Number=Sing _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 approximately approximately ADV RB _ _ _ _ _ 48 120 120 NUM CD NumType=Card _ _ _ _ 49 kD kD NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ _ 51 as as ADP IN _ _ _ _ _ 52 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 53 of of ADP IN _ _ _ _ _ 54 T t PROPN NNP Number=Sing _ _ _ _ 55 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 11359 # text = NK cells do not express NFATc constitutively, but NFATc mRNA accumulation is induced in these cells within 2 h of stimulation with CD16 ligands. 1 NK NK PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 express express VERB VB VerbForm=Inf _ _ _ _ 6 NFATc NFATc PROPN NNP Number=Sing _ _ _ _ 7 constitutively constitutively ADV RB _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 NFATc NFATc PROPN NNP Number=Sing _ _ _ _ 11 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 12 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 within within ADP IN _ _ _ _ _ 19 2 2 NUM CD NumType=Card _ _ _ _ 20 h h NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 CD cd NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 16 16 NUM CD NumType=Card _ _ _ _ 26 ligands ligand NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 11360 # text = However, supershift assays using the available mAb recognizing the T cell NFATc revealed no detectable NFATc protein in nuclear and cytoplasmic extracts from CD16- or phorbol ester-stimulated cells at any time tested, up to 4 h. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 supershift supershift VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 assays assay NOUN NNS Number=Plur _ _ _ _ 5 using use VERB VBG VerbForm=Ger _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 available available ADJ JJ Degree=Pos _ _ _ _ 8 mAb mAb NOUN NN Number=Sing _ _ _ _ 9 recognizing recognize VERB VBG VerbForm=Ger _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 T T PROPN NNP Number=Sing _ _ _ _ 12 cell cell PROPN NNP Number=Sing _ _ _ _ 13 NFATc NFATc PROPN NNP Number=Sing _ _ _ _ 14 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 no no DET DT _ _ _ _ _ 16 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 17 NFATc NFATc PROPN NNP Number=Sing _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 23 extracts extract NOUN NNS Number=Plur _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 CD16 CD16 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 29 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 at at ADP IN _ _ _ _ _ 34 any any DET DT _ _ _ _ _ 35 time time NOUN NN Number=Sing _ _ _ _ 36 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 up up ADP IN _ _ _ _ _ 39 to to ADP IN _ _ _ _ _ 40 4 4 NUM CD NumType=Card _ _ _ _ 41 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 11361 # text = These results provide the first direct evidence that both CsA-sensitive transcription factors, NFATp and NFATc, are expressed in human NK cells, and that their activation and/or expression can be regulated in primary cells by a single stimulus, that, in the case of CD16 in NK cells, results in early activation of NFATp and subsequently induced expression of NFATc mRNA. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 first first ADV RBS _ _ _ _ _ 6 direct direct ADJ JJ Degree=Pos _ _ _ _ 7 evidence evidence NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 both both DET DT _ _ _ _ _ 10 CsA csa NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 NFATc NFATc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 NK NK PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 that that SCONJ IN _ _ _ _ _ 29 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ SpaceAfter=No 32 / / PUNCT , _ _ _ _ SpaceAfter=No 33 or or CCONJ CC _ _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ _ 35 can can AUX MD VerbForm=Fin _ _ _ _ 36 be be AUX VB VerbForm=Inf _ _ _ _ 37 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 primary primary ADJ JJ Degree=Pos _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ _ 41 by by ADP IN _ _ _ _ _ 42 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 single single ADJ JJ Degree=Pos _ _ _ _ 44 stimulus stimulus NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 case case NOUN NN Number=Sing _ _ _ _ 51 of of ADP IN _ _ _ _ _ 52 CD16 CD16 PROPN NNP Number=Sing _ _ _ _ 53 in in ADP IN _ _ _ _ _ 54 NK NK PROPN NNP Number=Sing _ _ _ _ 55 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 56 , , PUNCT , _ _ _ _ _ 57 results result NOUN NNS Number=Plur _ _ _ _ 58 in in ADP IN _ _ _ _ _ 59 early early ADJ JJ Degree=Pos _ _ _ _ 60 activation activation NOUN NN Number=Sing _ _ _ _ 61 of of ADP IN _ _ _ _ _ 62 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 63 and and CCONJ CC _ _ _ _ _ 64 subsequently subsequently ADV RB _ _ _ _ _ 65 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 66 expression expression NOUN NN Number=Sing _ _ _ _ 67 of of ADP IN _ _ _ _ _ 68 NFATc NFATc PROPN NNP Number=Sing _ _ _ _ 69 mRNA. mRNA. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11362 # text = Document 0030012565 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012565 0030012565 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11363 # text = Overexpression of protein kinase C-zeta stimulates leukemic cell differentiation. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 kinase kinase NOUN NN Number=Sing _ _ _ _ 5 C- C- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 zeta zeta NOUN NN Number=Sing _ _ _ _ 7 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11364 # text = A function for protein kinase C-zeta (PKC-zeta), a member of the phorbol ester nonresponsive atypical protein kinase C subfamily, in modulating differentiation was examined in the leukemic U937 cell. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 function function NOUN NN Number=Sing _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ _ 6 C c NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 zeta zeta NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 PKC Pkc NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 zeta zeta NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 member member NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 20 ester ester NOUN NN Number=Sing _ _ _ _ 21 nonresponsive nonresponsive ADJ JJ Degree=Pos _ _ _ _ 22 atypical atypical ADJ JJ Degree=Pos _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ _ 24 kinase kinase NOUN NN Number=Sing _ _ _ _ 25 C C PROPN NNP Number=Sing _ _ _ _ 26 subfamily subfamily ADV RB _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 modulating modulat ADJ JJ Degree=Pos _ _ _ _ 30 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 31 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 32 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 36 U937 U937 NUM CD NumType=Card _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 11365 # text = Transfected U937 cells stably overexpressing PKC-zeta displayed a longer doubling time, lower saturation density at confluency, and an increase in adherence to plastic as compared to control cells. 1 Transfected Transfect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 U937 U937 NUM CD NumType=Card _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 stably stably ADV RB _ _ _ _ _ 5 overexpressing overexpresse VERB VBG VerbForm=Ger _ _ _ _ 6 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 zeta zeta PROPN NNP Number=Sing _ _ _ _ 9 displayed display VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 longer longer ADJ JJR Degree=Cmp _ _ _ _ 12 doubling doubling NOUN NN Number=Sing _ _ _ _ 13 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 lower lower ADJ JJR Degree=Cmp _ _ _ _ 16 saturation saturation NOUN NN Number=Sing _ _ _ _ 17 density density NOUN NN Number=Sing _ _ _ _ 18 at at ADP IN _ _ _ _ _ 19 confluency confluency NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 increase increase NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 adherence adherence NOUN NN Number=Sing _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 plastic plastic ADJ JJ Degree=Pos _ _ _ _ 28 as as SCONJ IN _ _ _ _ _ 29 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 to to PART TO _ _ _ _ _ 31 control control VERB VB VerbForm=Inf _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 11366 # text = PKC-zeta cells expressed a more differentiated phenotype as assessed by changes in morphology, surface antigen expression, and lysosomal enzyme activities and were distinct from parental U937 cells stimulated to differentiate by exposure to phorbol esters. 1 PKC Pkc NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 zeta zeta NOUN NN Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 more more ADV RBR _ _ _ _ _ 8 differentiated differentiated ADJ JJ Degree=Pos _ _ _ _ 9 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 10 as as SCONJ IN _ _ _ _ _ 11 assessed assess VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 changes change NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 morphology morphology NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 surface surface NOUN NN Number=Sing _ _ _ _ 18 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 lysosomal lysosomal ADJ JJ Degree=Pos _ _ _ _ 23 enzyme enzyme NOUN NN Number=Sing _ _ _ _ 24 activities activity NOUN NNS Number=Plur _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 28 from from ADP IN _ _ _ _ _ 29 parental parental ADJ JJ Degree=Pos _ _ _ _ 30 U937 U937 NUM CD NumType=Card _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 to to PART TO _ _ _ _ _ 34 differentiate differentiate VERB VB VerbForm=Inf _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 exposure exposure NOUN NN Number=Sing _ _ _ _ 37 to to PART TO _ _ _ _ _ 38 phorbol phorbol VERB VB VerbForm=Inf _ _ _ _ 39 esters ester NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 11367 # text = In contrast to parental U937 cells, PKC-zeta cells constitutively expressed mRNA transcripts for c-jun and a low mobility AP-1 binding activity. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 parental parental VERB VB VerbForm=Inf _ _ _ _ 5 U937 U937 NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 PKC Pkc NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 zeta zeta NOUN NN Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 constitutively constitutively ADV RB _ _ _ _ _ 13 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 15 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 c- c- SYM NFP _ _ _ _ SpaceAfter=No 18 jun jun NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 low low ADJ JJ Degree=Pos _ _ _ _ 22 mobility mobility NOUN NN Number=Sing _ _ _ _ 23 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 binding binding VERB VBG VerbForm=Ger _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 11368 # text = Thus, PKC-zeta overexpression stimulates a type of phenotypic differentiation that differs significantly from maturation occurring upon activation of other PKC subfamilies induced by phorbol ester treatment. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 PKC PKC NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 zeta zeta NOUN NN Number=Sing _ _ _ _ 6 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 7 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 type type NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 phenotypic phenotypic ADJ JJ Degree=Pos _ _ _ _ 12 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 differs differ VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 significantly significantly ADV RB _ _ _ _ _ 16 from from ADP IN _ _ _ _ _ 17 maturation maturation NOUN NN Number=Sing _ _ _ _ 18 occurring occurre VERB VBG VerbForm=Ger _ _ _ _ 19 upon upon ADP IN _ _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 other other ADJ JJ Degree=Pos _ _ _ _ 23 PKC PKC PROPN NNP Number=Sing _ _ _ _ 24 subfamilies subfamily NOUN NNS Number=Plur _ _ _ _ 25 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 28 ester ester NOUN NN Number=Sing _ _ _ _ 29 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 11369 # text = Increased expression of the c-jun protooncogene and an increase in AP-1 binding activity in PKC-zeta cells provides a potential mechanism for explaining the altered differentiation status of this cell. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 c- c- SYM SYM _ _ _ _ SpaceAfter=No 6 jun jun NOUN NN Number=Sing _ _ _ _ 7 protooncogene protooncogene NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 increase increase NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 binding binding VERB VBG VerbForm=Ger _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 zeta zeta NOUN NN Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 potential potential ADJ JJ Degree=Pos _ _ _ _ 25 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 26 for for SCONJ IN _ _ _ _ _ 27 explaining explain VERB VBG VerbForm=Ger _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 altered alter VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 31 status status NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11370 # text = Document 0030012569 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012569 0030012569 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11371 # text = Characterization of a mutant cell line that does not activate NF-kappaB in response to multiple stimuli. 1 Characterization Characterization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 line line NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 activate activate VERB VB VerbForm=Inf _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 response response NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 18 stimuli stimuli NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11372 # text = Numerous genes required during the immune or inflammation response as well as the adhesion process are regulated by nuclear factor kappaB (NF-kappaB). 1 Numerous numerous ADJ JJ Degree=Pos _ _ _ _ 2 genes gene NOUN NNS Number=Plur _ _ _ _ 3 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 during during ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 immune immune NOUN NN Number=Sing _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 9 response response NOUN NN Number=Sing _ _ _ _ 10 as as ADV RB _ _ _ _ _ 11 well well ADV RB Degree=Pos _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 15 process process NOUN NN Number=Sing _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 11373 # text = Associated with its inhibitor, I kappaB, NF-kappaB resides as an inactive form in the cytoplasm. 1 Associated associate VERB VBN Tense=Past|Typo=Yes|VerbForm=Part|Voice=Pass _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 4 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 12 resides reside NOUN NNS Number=Plur _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 16 form form NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 11374 # text = Upon stimulation by various agents, I kappaB is proteolyzed and NF-kappaB translocates to the nucleus, where it activates its target genes. 1 Upon upon ADP IN _ _ _ _ _ 2 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 various various ADJ JJ Degree=Pos _ _ _ _ 5 agents agent NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 proteolyzed proteolyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 15 translocates translocate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 where where ADV WRB PronType=Rel _ _ _ _ 21 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 22 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 24 target target NOUN NN Number=Sing _ _ _ _ 25 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11375 # text = The transduction pathways that lead to I kappaB inactivation remain poorly understood. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transduction transduction NOUN NN Number=Sing _ _ _ _ 3 pathways pathway NOUN NNS Number=Plur _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 lead lead VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 to to SCONJ IN _ _ _ _ _ 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 8 kappaB kappaB VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 inactivation inactivation NOUN NN Number=Sing _ _ _ _ 10 remain remain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 poorly poorly ADJ JJ Degree=Pos _ _ _ _ 12 understood understand NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 11376 # text = In this study, we have characterized a cellular mutant, the 70/Z3-derived 1.3E2 murine pre-B cell line, that does not activate NF-kappaB in response to several stimuli. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 10 mutant mutant NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 70/Z3 70/Z3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 1.3E2 1.3E2 NUM CD NumType=Card _ _ _ _ 17 murine murine NOUN NN Number=Sing _ _ _ _ 18 pre pre X AFX _ _ _ _ SpaceAfter=No 19 -B -b ADJ JJ Degree=Pos _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 24 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 not not PART RB _ _ _ _ _ 26 activate activate VERB VB VerbForm=Inf _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 response response NOUN NN Number=Sing _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 several several ADJ JJ Degree=Pos _ _ _ _ 34 stimuli stimuli NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 11377 # text = We demonstrate that upon stimulation by lipopolysaccharide, Taxol, phorbol myristate acetate, interleukin-1, or double-stranded RNA, I kappaB alpha is not degraded, as a result of an absence of induced phosphorylation on serines 32 and 36. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 upon upon ADP IN _ _ _ _ _ 5 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 Taxol Taxol NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 12 myristate myristate NOUN NN Number=Sing _ _ _ _ 13 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 stranded strand VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 RNA RNa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 26 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 27 alpha alpha PROPN NNP Number=Sing _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 not not PART RB _ _ _ _ _ 30 degraded degrad VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 as as ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 result result NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 absence absence NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 41 on on ADP IN _ _ _ _ _ 42 serines serine NOUN NNS Number=Plur _ _ _ _ 43 32 32 NUM CD NumType=Card _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 36 36 NUM CD NumType=Card _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 11378 # text = Neither a mutation in I kappaB alpha nor a mutation in p50 or relA, the two major subunits of NF-kappaB in this cell line, accounts for this phosphorylation defect. 1 Neither neither CCONJ CC _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 mutation mutation NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 alpha alpha PROPN NNP Number=Sing _ _ _ _ 8 nor nor CCONJ CC _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 mutation mutation NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 p50 p50 NUM CD NumType=Card _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 relA relA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 two two NUM CD NumType=Card _ _ _ _ 18 major major ADJ JJ Degree=Pos _ _ _ _ 19 subunits subunit NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 accounts account NOUN NNS Number=Plur _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 32 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 33 defect defect NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 11379 # text = As well as culminating in the inducible phosphorylation of I kappaB alpha on serines 32 and 36, all the stimuli that are inactive on 1.3E2 cells exhibit a sensitivity to the antioxidant pyrrolidine dithiocarbamate (PDTC). 1 As as ADV RB _ _ _ _ _ 2 well well ADV RB Degree=Pos _ _ _ _ 3 as as SCONJ IN _ _ _ _ _ 4 culminating culminat VERB VBG VerbForm=Ger _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 8 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 12 alpha alpha ADV RB _ _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 serines serine NOUN NNS Number=Plur _ _ _ _ 15 32 32 NUM CD NumType=Card _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 36 36 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 all all DET PDT _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 stimuli stimuli NOUN NNS Number=Plur _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 1.3E2 1.3E2 NUM CD NumType=Card _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 exhibit exhibit NOUN NN Number=Sing _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 antioxidant antioxidant ADJ JJ Degree=Pos _ _ _ _ 34 pyrrolidine pyrrolidine NOUN NN Number=Sing _ _ _ _ 35 dithiocarbamate dithiocarbamate NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 PDTC PDTC NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 11380 # text = In contrast, stimuli such as hyperosmotic shock or phosphatase inhibitors, which use PDTC-insensitive pathways, induce I kappaB alpha degradation in 1.3E2. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 stimuli stimuli ADJ JJ Degree=Pos _ _ _ _ 5 such such ADJ JJ Degree=Pos _ _ _ _ 6 as as ADP IN _ _ _ _ _ 7 hyperosmotic hyperosmotic ADJ JJ Degree=Pos _ _ _ _ 8 shock shock NOUN NN Number=Sing _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 11 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 use use VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 PDTC Pdtc NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 insensitive insensitive ADJ JJ Degree=Pos _ _ _ _ 18 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 induce induce SCONJ IN _ _ _ _ _ 21 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 22 kappaB kappaB VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 alpha alpha ADP IN _ _ _ _ _ 24 degradation degradation NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 1.3E2 1.3E2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 11381 # text = Analysis of the redox status of 1.3E2 does not reveal any difference from wild-type 70Z/3. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 redox redox NOUN NN Number=Sing _ _ _ _ 5 status status NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 1.3E2 1.3E2 NUM CD NumType=Card _ _ _ _ 8 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 reveal reveal VERB VB VerbForm=Inf _ _ _ _ 11 any any DET DT _ _ _ _ _ 12 difference difference NOUN NN Number=Sing _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 type type NOUN NN Number=Sing _ _ _ _ 17 70Z 70z NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 / / PUNCT , _ _ _ _ SpaceAfter=No 19 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 11382 # text = We also report that the human T-cell leukemia virus type 1 (HTLV-1)-derived Tax trans-activator induces NF-kappaB activity in 1.3E2, suggesting that this viral protein does not operate via the defective pathway. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 10 virus virus NOUN NN Number=Sing _ _ _ _ 11 type type NOUN NN Number=Sing _ _ _ _ 12 1 1 NUM CD NumType=Card _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 Tax Tax NOUN NN Number=Sing _ _ _ _ 21 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 activator activator NOUN NN Number=Sing _ _ _ _ 24 induces induce NOUN NNS Number=Plur _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 1.3E2 1.3E2 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 33 that that SCONJ IN _ _ _ _ _ 34 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 35 viral viral ADJ JJ Degree=Pos _ _ _ _ 36 protein protein NOUN NN Number=Sing _ _ _ _ 37 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 not not PART RB _ _ _ _ _ 39 operate operate VERB VB VerbForm=Inf _ _ _ _ 40 via via ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 defective defective ADJ JJ Degree=Pos _ _ _ _ 43 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 11383 # text = Finally, we show that two other I kappaB molecules, I kappaB beta and the recently identified I kappaB epsilon, are not degraded in the 1.3E2 cell line following stimulation. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 two two NUM CD NumType=Card _ _ _ _ 7 other other ADJ JJ Degree=Pos _ _ _ _ 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 kappaB kappaB VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 13 kappaB kappaB VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 beta beta NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 recently recently ADV RB _ _ _ _ _ 18 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 epsilon epsilon PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 not not PART RB _ _ _ _ _ 25 degraded degrad VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 1.3E2 1.3E2 NUM CD NumType=Card _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 line line NOUN NN Number=Sing _ _ _ _ 31 following follow VERB VBG VerbForm=Ger _ _ _ _ 32 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 11384 # text = Our results demonstrate that 1.3E2 is a cellular transduction mutant exhibiting a defect in a step that is required by several different stimuli to activate NF-kappaB. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 1.3E2 1.3E2 NUM CD NumType=Card _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 9 transduction transduction NOUN NN Number=Sing _ _ _ _ 10 mutant mutant NOUN NN Number=Sing _ _ _ _ 11 exhibiting exhibite VERB VBG VerbForm=Ger _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 defect defect NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 step step NOUN NN Number=Sing _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 several several ADJ JJ Degree=Pos _ _ _ _ 22 different different ADJ JJ Degree=Pos _ _ _ _ 23 stimuli stimuli NOUN NN Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 activate activate VERB VB VerbForm=Inf _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 11385 # text = In addition, this analysis suggests a common step in the signaling pathways that trigger I kappaB alpha, I kappaB beta, and I kappaB epsilon degradation. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 analysis analysis NOUN NN Number=Sing _ _ _ _ 6 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 common common ADJ JJ Degree=Pos _ _ _ _ 9 step step NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 signaling signaling NOUN NN Number=Sing _ _ _ _ 13 pathways pathway VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 15 trigger trigger NOUN NN Number=Sing _ _ _ _ 16 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 17 kappaB kappaB VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 alpha alpha ADV RB _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 21 kappaB kappaB VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 26 kappaB kappaB VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 epsilon epsilon ADP IN _ _ _ _ _ 28 degradation degradation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11386 # text = Document 0030012570 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012570 0030012570 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11387 # text = RP1, a new member of the adenomatous polyposis coli-binding EB1-like gene family, is differentially expressed in activated T cells. 1 RP1 RP1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 new new ADJ JJ Degree=Pos _ _ _ _ 5 member member NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 adenomatous adenomatous ADJ JJ Degree=Pos _ _ _ _ 9 polyposis polyposis NOUN NN Number=Sing _ _ _ _ 10 coli-binding coli-bind VERB VBG VerbForm=Ger _ _ _ _ 11 EB EB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 like like ADP IN _ _ _ _ _ 15 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 differentially differentially ADV RB _ _ _ _ _ 20 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11388 # text = Cross-linking of the CD3 and CD28 molecules on T lymphocytes represents one of the most effective signals for T lymphocyte activation and triggering of their cytotoxic effector function. 1 Cross cross ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 linking linking NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 CD28 CD28 NOUN NN Number=Sing _ _ _ _ 9 molecules molecule NOUN NNS Number=Plur _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 T T PROPN NNP Number=Sing _ _ _ _ 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 13 represents represent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 one one NUM CD NumType=Card _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 most most ADV RBS _ _ _ _ _ 18 effective effective ADJ JJ Degree=Pos _ _ _ _ 19 signals signal NOUN NNS Number=Plur _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 triggering triggering NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 28 cytotoxic cytotoxic ADJ JJ Degree=Pos _ _ _ _ 29 effector effector NOUN NN Number=Sing _ _ _ _ 30 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11389 # text = To identify genes that are expressed in T cells after stimulation, mRNA from T lymphocytes that had been activated by the simultaneous stimulation of the CD3 and CD28 trigger molecules was transcribed for a differential mRNA display analysis into cDNA and was compared with cDNA from CD28- or CD3-activated or resting lymphocytes. 1 To to PART TO _ _ _ _ _ 2 identify identify VERB VB VerbForm=Inf _ _ _ _ 3 genes gene NOUN NNS Number=Plur _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 after after ADP IN _ _ _ _ _ 11 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 20 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 simultaneous simultaneous ADJ JJ Degree=Pos _ _ _ _ 24 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 CD28 CD28 NUM CD NumType=Card _ _ _ _ 30 trigger trigger ADJ JJR Degree=Cmp _ _ _ _ 31 molecules molecule NOUN NNS Number=Plur _ _ _ _ 32 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 33 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 34 for for ADP IN _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 differential differential ADJ JJ Degree=Pos _ _ _ _ 37 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 38 display display NOUN NN Number=Sing _ _ _ _ 39 analysis analysis NOUN NN Number=Sing _ _ _ _ 40 into into ADP IN _ _ _ _ _ 41 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 44 compared compare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 45 with with ADP IN _ _ _ _ _ 46 cDNA cDNa PROPN NNP Number=Sing _ _ _ _ 47 from from ADP IN _ _ _ _ _ 48 CD28 CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT , _ _ _ _ _ 50 or or CCONJ CC _ _ _ _ _ 51 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 54 or or CCONJ CC _ _ _ _ _ 55 resting reste VERB VBG VerbForm=Ger _ _ _ _ 56 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 11390 # text = Differential expression was confirmed subsequently by Northern blot analysis. 1 Differential differential ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 confirmed confirm VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 subsequently subsequently ADV RB _ _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 8 blot blot NOUN NN Number=Sing _ _ _ _ 9 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 11391 # text = One of the cDNA fragments expressed specifically in CD3- and CD28-activated 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 cDNA cDNA PROPN NNP Number=Sing _ _ _ _ 5 fragments fragment NOUN NNS Number=Plur _ _ _ _ 6 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 specifically specifically ADV RB _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 CD28 CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 -activated -activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ # sent_id = 11392 # text = T cells was designated RP1. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 designated designate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 RP1 RP1 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 . . PUNCT . _ _ _ _ _ # sent_id = 11393 # text = The predictive protein-coding region of RP1 had a significant homology to members of the recently found adenomatous polyposis coli (APC) protein-binding EB1 gene family, which codes for yet unknown protein(s). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 predictive predictive ADJ JJ Degree=Pos _ _ _ _ 3 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 4 coding code VERB VBG VerbForm=Ger _ _ _ _ 5 region region NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 RP1 RP1 PROPN NNP Number=Sing _ _ _ _ 8 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 significant significant ADJ JJ Degree=Pos _ _ _ _ 11 homology homology NOUN NN Number=Sing _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 members member NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 recently recently ADV RB _ _ _ _ _ 17 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 adenomatous adenomatous ADJ JJ Degree=Pos _ _ _ _ 19 polyposis polyposis NOUN NN Number=Sing _ _ _ _ 20 coli coli NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 APC APC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 25 binding bind VERB VBG VerbForm=Ger _ _ _ _ 26 EB1 EB1 NUM CD NumType=Card _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 which which PRON WDT PronType=Rel _ _ _ _ 31 codes code VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 yet yet ADV RB _ _ _ _ _ 34 unknown unknown ADJ JJ Degree=Pos _ _ _ _ 35 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 s s X AFX _ _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 11394 # text = Bacterially expressed RP1 protein revealed specific binding to wild-type but not to mutated APC protein. 1 Bacterially Bacterially ADV RB _ _ _ _ _ 2 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 RP1 Rp1 NUM CD NumType=Card _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 specific specific ADJ JJ Degree=Pos _ _ _ _ 7 binding binding VERB VBG VerbForm=Ger _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 type type NOUN NN Number=Sing _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 APC Apc NOUN NN Number=Sing _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 11395 # text = The rapid up-regulation of RP1 mRNA in properly activated T cells suggests that this gene might belong to the immediate/early gene family, which controls the signal transduction cascade downstream of the TCR. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 3 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 regulation regulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 RP1 RP1 PROPN NNP Number=Sing _ _ _ _ 8 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 properly properly ADV RB _ _ _ _ _ 11 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 might might AUX MD VerbForm=Fin _ _ _ _ 19 belong belong VERB VB VerbForm=Inf _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 / / PUNCT , _ _ _ _ SpaceAfter=No 24 early early ADJ JJ Degree=Pos _ _ _ _ 25 gene gene ADJ JJ Degree=Pos _ _ _ _ 26 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 which which PRON WDT PronType=Rel _ _ _ _ 29 controls control VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 signal signal NOUN NN Number=Sing _ _ _ _ 32 transduction transduction NOUN NN Number=Sing _ _ _ _ 33 cascade cascade NOUN NN Number=Sing _ _ _ _ 34 downstream downstream NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 TCR Tcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 11396 # text = As the expression level of the RP1 gene in activated T cells and a spectrum of tumor-derived cell lines correlates with the proliferative status of the cells, members of the EB1-like gene family may not only be involved in the tumorigenesis of colorectal cancers but may also play a role in the proliferative control of normal cells. 1 As as SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 level level NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 RP1 RP1 PROPN NNP Number=Sing _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 spectrum spectrum NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 tumor tumor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 lines line NOUN NNS Number=Plur _ _ _ _ 22 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 26 status status NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 members member NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 EB EB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 like like ADJ JJ Degree=Pos _ _ _ _ 38 gene gene NOUN NN Number=Sing _ _ _ _ 39 family family NOUN NN Number=Sing _ _ _ _ 40 may may AUX MD VerbForm=Fin _ _ _ _ 41 not not PART RB _ _ _ _ _ 42 only only ADV RB _ _ _ _ _ 43 be be AUX VB VerbForm=Inf _ _ _ _ 44 involved involved ADJ JJ Degree=Pos _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 tumorigenesis tumorigenesis NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 colorectal colorectal ADJ JJ Degree=Pos _ _ _ _ 50 cancers cancer NOUN NNS Number=Plur _ _ _ _ 51 but but CCONJ CC _ _ _ _ _ 52 may may AUX MD VerbForm=Fin _ _ _ _ 53 also also ADV RB _ _ _ _ _ 54 play play VERB VB VerbForm=Inf _ _ _ _ 55 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 56 role role NOUN NN Number=Sing _ _ _ _ 57 in in ADP IN _ _ _ _ _ 58 the the DET DT Definite=Def|PronType=Art _ _ _ _ 59 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 60 control control NOUN NN Number=Sing _ _ _ _ 61 of of ADP IN _ _ _ _ _ 62 normal normal ADJ JJ Degree=Pos _ _ _ _ 63 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 64 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11397 # text = Document 0030012571 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012571 0030012571 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11398 # text = Non-steroidal anti-inflammatory drugs inhibit the expression of cytokines and induce HSP70 in human monocytes. 1 Non-steroidal Non-steroidal ADJ JJ Degree=Pos _ _ _ _ 2 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 3 drugs drug NOUN NNS Number=Plur _ _ _ _ 4 inhibit inhibit VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 induce induce ADJ JJ Degree=Pos _ _ _ _ 11 HSP70 HSP70 NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11399 # text = Recent studies have shown that the non-steroidal anti-inflammatory drugs (NSAIDs) activate heat shock transcription factor (HSF1) from a latent cytoplasmic form to a nuclear, DNA binding state. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 non-steroidal non-steroidal ADJ JJ Degree=Pos _ _ _ _ 8 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 9 drugs drug NOUN NNS Number=Plur _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 NSAIDs NSAid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 activate activate ADJ JJ Degree=Pos _ _ _ _ 14 heat heat NOUN NN Number=Sing _ _ _ _ 15 shock shock NOUN NN Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 HSF1 Hsf1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 latent latent ADJ JJ Degree=Pos _ _ _ _ 24 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 25 form form NOUN NN Number=Sing _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 nuclear nuclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 DNA dna NOUN NN Number=Sing _ _ _ _ 31 binding binding VERB VBG VerbForm=Ger _ _ _ _ 32 state state NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 11400 # text = As HSF1 can function as both an activator of heat shock genes and a repressor of non-heat shock genes such as IL1B and c- fos, we have examined the potential role of HSF1 in the effects of NSAIDs on gene expression in a human monocytic cell line THP-1. 1 As as SCONJ IN _ _ _ _ _ 2 HSF1 HSF1 PROPN NNP Number=Sing _ _ _ _ 3 can can AUX MD VerbForm=Fin _ _ _ _ 4 function function VERB VB VerbForm=Inf _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 both both CCONJ CC _ _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 activator activator NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 heat heat NOUN NN Number=Sing _ _ _ _ 11 shock shock NOUN NN Number=Sing _ _ _ _ 12 genes gene NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 repressor repressor NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 non non X AFX _ _ _ _ SpaceAfter=No 18 -heat -heat ADJ JJ Degree=Pos _ _ _ _ 19 shock shock NOUN NN Number=Sing _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ _ 21 such such ADJ JJ Degree=Pos _ _ _ _ 22 as as ADP IN _ _ _ _ _ 23 IL1B Il1b NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ _ 27 fos fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 30 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 potential potential ADJ JJ Degree=Pos _ _ _ _ 34 role role NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 HSF1 HSF1 NUM CD NumType=Card _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 effects effect NOUN NNS Number=Plur _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 NSAIDs NSAid NOUN NNS Number=Plur _ _ _ _ 42 on on ADP IN _ _ _ _ _ 43 gene gene NOUN NN Number=Sing _ _ _ _ 44 expression expression NOUN NN Number=Sing _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 47 human human ADJ JJ Degree=Pos _ _ _ _ 48 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 49 cell cell NOUN NN Number=Sing _ _ _ _ 50 line line NOUN NN Number=Sing _ _ _ _ 51 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 11401 # text = We found that two members of the NSAIDs, sodium salicylate and sulindac repress the IL1B promoter to similar degree to heat shock or HSF1 overexpression. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 members member NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 NSAIDs Nsaids PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 sodium sodium ADJ JJ Degree=Pos _ _ _ _ 11 salicylate salicylate NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 sulindac sulindac NOUN NN Number=Sing _ _ _ _ 14 repress repress VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 IL1B Il1b PROPN NNP Number=Sing _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 similar similar ADJ JJ Degree=Pos _ _ _ _ 20 degree degree NOUN NN Number=Sing _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 heat heat NOUN NN Number=Sing _ _ _ _ 23 shock shock NOUN NN Number=Sing _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 HSF1 Hsf1 NUM CD NumType=Card _ _ _ _ 26 overexpression overexpression NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 11402 # text = In addition, sodium salicylate and additional NSAIDs used at concentrations that activate HSF1 also inhibited the expression of other monocytic genes (TNF-alpha, IL-1beta, IL-6, IL-8, IL-10, ICAM-1) activated by exposure to a pro-inflammatory stimulus (lipopolysaccharide, LPS). 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 sodium sodium NOUN NN Number=Sing _ _ _ _ 5 salicylate salicylate NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 additional additional ADJ JJ Degree=Pos _ _ _ _ 8 NSAIDs NSAid NOUN NNS Number=Plur _ _ _ _ 9 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 at at ADP IN _ _ _ _ _ 11 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 activate activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 HSF1 HSF1 PROPN NNP Number=Sing _ _ _ _ 15 also also ADV RB _ _ _ _ _ 16 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 other other ADJ JJ Degree=Pos _ _ _ _ 21 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 22 genes gene NOUN NNS Number=Plur _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - SYM SYM _ _ _ _ SpaceAfter=No 43 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 ICAM ICAm NUM CD NumType=Card _ _ _ SpaceAfter=No 46 - - SYM SYM _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ _ 49 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 by by ADP IN _ _ _ _ _ 51 exposure exposure NOUN NN Number=Sing _ _ _ _ 52 to to ADP IN _ _ _ _ _ 53 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 54 pro-inflammatory pro-inflammatory ADJ JJ Degree=Pos _ _ _ _ 55 stimulus stimulus NOUN NN Number=Sing _ _ _ _ 56 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 57 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 , , PUNCT , _ _ _ _ _ 59 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 60 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ _ # sent_id = 11403 # text = At least in the case of the IL1B promoter, repression did not seem to involve another factor whose activity is affected by the NSAIDs, NFkappaB as the IL1B promoter fragment used in our studies is not NFkappaB responsive and binds specifically to HSF1. 1 At at ADV RB _ _ _ _ _ 2 least least ADV RBS Degree=Sup _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 case case NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 IL1B IL1B PROPN NNP Number=Sing _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 repression repression NOUN NN Number=Sing _ _ _ _ 12 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 seem seem VERB VB VerbForm=Inf _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 involve involve VERB VB VerbForm=Inf _ _ _ _ 17 another another DET DT _ _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 NSAIDs Nsaids PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 28 as as ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 IL1B Il1b PROPN NNP Number=Sing _ _ _ _ 31 promoter promoter NOUN NN Number=Sing _ _ _ _ 32 fragment fragment NOUN NN Number=Sing _ _ _ _ 33 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 36 studies study NOUN NNS Number=Plur _ _ _ _ 37 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 not not PART RB _ _ _ _ _ 39 NFkappaB Nfkappab ADJ JJ Degree=Pos _ _ _ _ 40 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 binds bind NOUN NNS Number=Plur _ _ _ _ 43 specifically specifically ADV RB _ _ _ _ _ 44 to to ADP IN _ _ _ _ _ 45 HSF1 HSF1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 11404 # text = Exposure to NSAIDs had a complex effect on HSP gene expression and while sulindac activated the stress responsive HSP70B promoter, sodium salicylate did not. 1 Exposure exposure NOUN NN Number=Sing _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 NSAIDs Nsaids PROPN NNP Number=Sing _ _ _ _ 4 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 complex complex ADJ JJ Degree=Pos _ _ _ _ 7 effect effect NOUN NN Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 HSP Hsp NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 while while SCONJ IN _ _ _ _ _ 14 sulindac sulindac NOUN NN Number=Sing _ _ _ _ 15 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 stress stress NOUN NN Number=Sing _ _ _ _ 18 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 19 HSP70B Hsp70b NOUN NN Number=Sing _ _ _ _ 20 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 sodium sodium NOUN NN Number=Sing _ _ _ _ 23 salicylate salicylate NOUN NN Number=Sing _ _ _ _ 24 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 not not PART RB _ _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11405 # text = In addition, only a subset of the NSAIDs induced HSP70 mRNA species. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 only only ADV RB _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 subset subset NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 NSAIDs Nsaids PROPN NNP Number=Sing _ _ _ _ 10 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 HSP70 HSP70 NUM CD NumType=Card _ _ _ _ 12 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 13 species species NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 11406 # text = These findings reflect the properties of HSF1 which can be activated to at least two DNA binding forms only one of which activates heat shock promoters and suggest that individual NSAID family members may differentially induce one or other of these forms. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 reflect reflect VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 properties property NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 HSF1 HSF1 PROPN NNP Number=Sing _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 can can AUX MD VerbForm=Fin _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 at at ADV RB _ _ _ _ _ 14 least least ADV RBS Degree=Sup _ _ _ _ 15 two two NUM CD NumType=Card _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ _ 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 forms form NOUN NNS Number=Plur _ _ _ _ 19 only only ADV RB _ _ _ _ _ 20 one one NUM CD NumType=Card _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 heat heat NOUN NN Number=Sing _ _ _ _ 25 shock shock NOUN NN Number=Sing _ _ _ _ 26 promoters promoter NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 30 individual individual ADJ JJ Degree=Pos _ _ _ _ 31 NSAID nsaid NOUN NN Number=Sing _ _ _ _ 32 family family NOUN NN Number=Sing _ _ _ _ 33 members member NOUN NNS Number=Plur _ _ _ _ 34 may may AUX MD VerbForm=Fin _ _ _ _ 35 differentially differentially ADV RB _ _ _ _ _ 36 induce induce VERB VB VerbForm=Inf _ _ _ _ 37 one one NUM CD NumType=Card _ _ _ _ 38 or or CCONJ CC _ _ _ _ _ 39 other other ADJ JJ Degree=Pos _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 42 forms form NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 11407 # text = Overall therefore, exposure to NSAIDs leads to a profound switch in gene expression in monocytic cells, with suppression of genes involved in macrophage activation and induction of stress genes and HSF1 appears to play a regulatory role in these effects. 1 Overall overall ADV RB _ _ _ _ _ 2 therefore therefore ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 exposure exposure VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 NSAIDs NSAid PROPN NNP Number=Sing _ _ _ _ 7 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 profound profound ADJ JJ Degree=Pos _ _ _ _ 11 switch switch NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 gene gene ADJ JJ Degree=Pos _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 suppression suppression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 genes gene NOUN NNS Number=Plur _ _ _ _ 23 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 induction induction NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 stress stress NOUN NN Number=Sing _ _ _ _ 31 genes gene NOUN NNS Number=Plur _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 HSF1 Hsf1 NOUN NN Number=Sing _ _ _ _ 34 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 play play VERB VB VerbForm=Inf _ _ _ _ 37 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 39 role role NOUN NN Number=Sing _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 42 effects effect NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 11408 # text = Copyright 1999 Academic Press. 1 Copyright copyright NOUN NN Number=Sing _ _ _ _ 2 1999 1999 NUM CD NumType=Card _ _ _ _ 3 Academic academic PROPN NNP Number=Sing _ _ _ _ 4 Press. Press. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11409 # text = Document 0030012572 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012572 0030012572 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11410 # text = Modulation of mRNA expression of a novel human myeloid-selective CCAAT/enhancer binding protein gene (C/EBP epsilon). 1 Modulation Modulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 mRNA mRNA NOUN NN Number=Sing _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 novel novel NOUN NN Number=Sing _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 myeloid myeloid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 selective selective ADJ JJ Degree=Pos _ _ _ _ 12 CCAAT Ccaat NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 / / PUNCT , _ _ _ _ SpaceAfter=No 14 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 15 binding bind VERB VBG VerbForm=Ger _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 EBP EBP PROPN NNP Number=Sing _ _ _ _ 22 epsilon epsilon NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11411 # text = Human C/EBP epsilon is a newly cloned gene coding for a CCAAT/enhancer binding protein that may be involved in the regulation of myeloid differentiation. 1 Human human PROPN NNP Number=Sing _ _ _ _ 2 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 / / PUNCT , _ _ _ _ SpaceAfter=No 4 EBP EBP PROPN NNP Number=Sing _ _ _ _ 5 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 newly newly ADV RB _ _ _ _ _ 9 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 coding cod VERB VBG VerbForm=Ger _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 CCAAT Ccaat NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 may may AUX MD VerbForm=Fin _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 involved involved ADJ JJ Degree=Pos _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 regulation regulation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 28 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 11412 # text = Our studies showed that levels of C/EBP epsilon mRNA were markedly increased in NB4 cells (promyelocytic leukemia line), because they were induced by 9-cis retinoic acid (9-cis RA) to differentiate towards granulocytes. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 levels level NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 EBP EBP PROPN NNP Number=Sing _ _ _ _ 10 epsilon epsilon ADP IN _ _ _ _ _ 11 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 markedly markedly ADV RB _ _ _ _ _ 14 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 NB4 NB4 PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 promyelocytic promyelocytic ADJ JJ Degree=Pos _ _ _ _ 20 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 21 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 because because SCONJ IN _ _ _ _ _ 25 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 26 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 cis cis NOUN NN Number=Sing _ _ _ _ 32 retinoic retinoic NOUN NN Number=Sing _ _ _ _ 33 acid acid NOUN NN Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 cis cis NOUN NN Number=Sing _ _ _ _ 38 RA Ra NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 to to PART TO _ _ _ _ _ 41 differentiate differentiate VERB VB VerbForm=Inf _ _ _ _ 42 towards towards ADP IN _ _ _ _ _ 43 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 11413 # text = Accumulation of C/EBP epsilon mRNA occurred as early as 1 hour after exposure of NB4 cells to 9-cis RA (5 x 10(-7) mol/L); and at 48 hours, levels were increased by 5.1-fold. 1 Accumulation accumulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 / / PUNCT , _ _ _ _ SpaceAfter=No 5 EBP EBP PROPN NNP Number=Sing _ _ _ _ 6 epsilon epsilon PROPN NNP Number=Sing _ _ _ _ 7 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 8 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 as as ADV RB _ _ _ _ _ 10 early early ADV RB Degree=Pos _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 1 1 NUM CD NumType=Card _ _ _ _ 13 hour hour NOUN NN Number=Sing _ _ _ _ 14 after after ADP IN _ _ _ _ _ 15 exposure exposure NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 NB4 NB4 NUM CD NumType=Card _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 cis cis NOUN NN Number=Sing _ _ _ _ 23 RA Ra NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 5 5 NUM CD NumType=Card _ _ _ _ 26 x x SYM SYM _ _ _ _ _ 27 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 (- (- PUNCT . _ _ _ _ SpaceAfter=No 29 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 mol/L mol/l NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 ; ; PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 at at ADP IN _ _ _ _ _ 36 48 48 NUM CD NumType=Card _ _ _ _ 37 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 levels level NOUN NNS Number=Plur _ _ _ _ 40 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 41 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 42 by by ADP IN _ _ _ _ _ 43 5.1 5.1 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 11414 # text = Dose-response studies showed that 10(-7) to 10(-6) mol/L 9-cis RA (12 hours) resulted in peak levels of C/EBP epsilon mRNA; but even 10(-10) mol/L 9-cis RA increased levels of these transcripts. 1 Dose Dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 response response NOUN NN Number=Sing _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 (- (- PUNCT . _ _ _ _ SpaceAfter=No 9 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 (- (- PUNCT . _ _ _ _ SpaceAfter=No 14 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 mol/L mol/l NOUN NN Number=Sing _ _ _ _ 17 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT : _ _ _ _ SpaceAfter=No 19 cis cis NOUN NN Number=Sing _ _ _ _ 20 RA Ra PROPN NNP Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 12 12 NUM CD NumType=Card _ _ _ _ 23 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 peak peak NOUN NN Number=Sing _ _ _ _ 28 levels level NOUN NNS Number=Plur _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 / / PUNCT , _ _ _ _ SpaceAfter=No 32 EBP EBP PROPN NNP Number=Sing _ _ _ _ 33 epsilon epsilon ADP IN _ _ _ _ _ 34 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 ; ; PUNCT , _ _ _ _ _ 36 but but CCONJ CC _ _ _ _ _ 37 even even ADV RB _ _ _ _ _ 38 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 (- (- PUNCT . _ _ _ _ SpaceAfter=No 40 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 mol/L mol/l NOUN NN Number=Sing _ _ _ _ 43 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 cis cis NOUN NN Number=Sing _ _ _ _ 46 RA Ra NOUN NN Number=Sing _ _ _ _ 47 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 48 levels level NOUN NNS Number=Plur _ _ _ _ 49 of of ADP IN _ _ _ _ _ 50 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 51 transcripts transcript NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 11415 # text = NB4 cells pulse-exposed (30 minutes) to all-trans retinoic acid (ATRA), washed, and cultured (3 days) with either dimethylsulfoxide (DMSO) or hexamethylene bisacetamide (HMBA) had a prominent increase in levels of C/EBP epsilon mRNA and an increase in granulocytic differentiation, but exposure to either DMSO or HMBA alone had no effect on base levels of C/EBP epsilon and did not induce differentiation. 1 NB4 NB4 NUM CD NumType=Card _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 pulse pulse ADV RB _ _ _ _ SpaceAfter=No 4 - - PUNCT : _ _ _ _ SpaceAfter=No 5 exposed exposed VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 30 30 NUM CD NumType=Card _ _ _ _ 8 minutes minute NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 all all DET DT _ _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 trans tran VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 15 acid acid NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 ATRA ATRA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 washed wash VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 cultured culture VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 3 3 NUM CD NumType=Card _ _ _ _ 26 days day NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 either either CCONJ CC _ _ _ _ _ 30 dimethylsulfoxide dimethylsulfoxide NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 DMSO DMSO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 or or CCONJ CC _ _ _ _ _ 35 hexamethylene hexamethylene NOUN NN Number=Sing _ _ _ _ 36 bisacetamide bisacetamide NOUN NN Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 HMBA HMBA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 41 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 prominent prominent ADJ JJ Degree=Pos _ _ _ _ 43 increase increase NOUN NN Number=Sing _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 levels level NOUN NNS Number=Plur _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 / / PUNCT , _ _ _ _ SpaceAfter=No 49 EBP EBP PROPN NNP Number=Sing _ _ _ _ 50 epsilon epsilon PROPN NNP Number=Sing _ _ _ _ 51 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 52 and and CCONJ CC _ _ _ _ _ 53 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 54 increase increase NOUN NN Number=Sing _ _ _ _ 55 in in ADP IN _ _ _ _ _ 56 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 57 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 , , PUNCT , _ _ _ _ _ 59 but but CCONJ CC _ _ _ _ _ 60 exposure exposure NOUN NN Number=Sing _ _ _ _ 61 to to ADP IN _ _ _ _ _ 62 either either CCONJ CC _ _ _ _ _ 63 DMSO DMSO PROPN NNP Number=Sing _ _ _ _ 64 or or CCONJ CC _ _ _ _ _ 65 HMBA HMBA PROPN NNP Number=Sing _ _ _ _ 66 alone alone ADV RB _ _ _ _ _ 67 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 68 no no DET DT _ _ _ _ _ 69 effect effect NOUN NN Number=Sing _ _ _ _ 70 on on ADP IN _ _ _ _ _ 71 base base NOUN NN Number=Sing _ _ _ _ 72 levels level NOUN NNS Number=Plur _ _ _ _ 73 of of ADP IN _ _ _ _ _ 74 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 75 / / PUNCT , _ _ _ _ SpaceAfter=No 76 EBP EBP PROPN NNP Number=Sing _ _ _ _ 77 epsilon epsilon PROPN NNP Number=Sing _ _ _ _ 78 and and CCONJ CC _ _ _ _ _ 79 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 80 not not PART RB _ _ _ _ _ 81 induce induce VERB VB VerbForm=Inf _ _ _ _ 82 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 83 . . PUNCT . _ _ _ _ _ # sent_id = 11416 # text = Macrophage-differentiation of NB4 reduced levels of C/EBP epsilon mRNA. 1 Macrophage Macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NB4 NB4 NUM CD NumType=Card _ _ _ _ 6 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 levels level NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 EBP EBP PROPN NNP Number=Sing _ _ _ _ 12 epsilon epsilon PROPN NNP Number=Sing _ _ _ _ 13 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 11417 # text = Nuclear run-off assays and half-life studies showed that accumulation of C/EBP epsilon mRNA by 9-cis RA was due to enhanced transcription. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 run run VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 3 -off -off ADJ JJ Degree=Pos _ _ _ _ 4 assays assay NOUN NNS Number=Plur _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 half half NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 life life NOUN NN Number=Sing _ _ _ _ 9 studies study NOUN NNS Number=Plur _ _ _ _ 10 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 12 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 EBP EBP PROPN NNP Number=Sing _ _ _ _ 17 epsilon epsilon ADP IN _ _ _ _ _ 18 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT : _ _ _ _ SpaceAfter=No 22 cis cis NOUN NN Number=Sing _ _ _ _ 23 RA Ra PROPN NNP Number=Sing _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 due due ADP IN _ _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 11418 # text = Furthermore, this C/EBP epsilon mRNA accumulation did not require synthesis of new protein factors because 9-cis RA induced C/EBP epsilon mRNA accumulation in the absence of new protein synthesis. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 EBP EBP PROPN NNP Number=Sing _ _ _ _ 7 epsilon epsilon PROPN NNP Number=Sing _ _ _ _ 8 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 9 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 10 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 require require VERB VB VerbForm=Inf _ _ _ _ 13 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 new new ADJ JJ Degree=Pos _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 factors factor NOUN NNS Number=Plur _ _ _ _ 18 because because SCONJ IN _ _ _ _ _ 19 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 cis cis NOUN NN Number=Sing _ _ _ _ 22 RA Ra NOUN NN Number=Sing _ _ _ _ 23 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 C/ Cith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 25 EBP EBP PROPN NNP Number=Sing _ _ _ _ 26 epsilon epsilon PROPN NNP Number=Sing _ _ _ _ 27 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 28 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 absence absence NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 new new ADJ JJ Degree=Pos _ _ _ _ 34 protein protein NOUN NN Number=Sing _ _ _ _ 35 synthesis synthesis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 11419 # text = ATRA also induced expression of C/EBP epsilon protein in NB4 cells, as shown by Western blotting. 1 ATRA ATRA ADV RB _ _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 EBP EBP PROPN NNP Number=Sing _ _ _ _ 9 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 NB4 NB4 PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 as as SCONJ IN _ _ _ _ _ 16 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 Western western ADJ JJ Degree=Pos _ _ _ _ 19 blotting blotting NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 11420 # text = In contrast to the increase of C/EBP epsilon in 9-cis RA-mediated granulocytic differentiation, the DMSO-induced differentiation of HL-60 cells down the granulocytic pathway was associated with an initial reduction of C/EBP epsilon mRNA levels. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 increase increase NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 EBP EBP PROPN NNP Number=Sing _ _ _ _ 10 epsilon epsilon NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT : _ _ _ _ SpaceAfter=No 14 cis cis NOUN NN Number=Sing _ _ _ _ 15 RA Ra NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT : _ _ _ _ SpaceAfter=No 17 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 19 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 DMSO Dmso PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 60 60 NUM CD NumType=Card _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 down down ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 34 pathway pathway NOUN NN Number=Sing _ _ _ _ 35 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 36 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 initial initial ADJ JJ Degree=Pos _ _ _ _ 40 reduction reduction NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 / / PUNCT , _ _ _ _ SpaceAfter=No 44 EBP EBP PROPN NNP Number=Sing _ _ _ _ 45 epsilon epsilon ADP IN _ _ _ _ _ 46 mRNA mRNa PROPN NNP Number=Sing _ _ _ _ 47 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 11421 # text = In summary, we have discovered that expression of C/EBP epsilon mRNA is markedly enhanced as the NB4 promyelocytes are induced by retinoids to differentiate towards granulocytes. 1 In in ADP IN _ _ _ _ _ 2 summary summary NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 discovered discover VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 EBP EBP PROPN NNP Number=Sing _ _ _ _ 13 epsilon epsilon PROPN NNP Number=Sing _ _ _ _ 14 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 markedly markedly ADV RB _ _ _ _ _ 17 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 NB4 Nb4 NOUN NN Number=Sing _ _ _ _ 21 promyelocytes promyelocyte NOUN NNS Number=Plur _ _ _ _ 22 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 retinoids retinoid NOUN NNS Number=Plur _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 differentiate differentiate VERB VB VerbForm=Inf _ _ _ _ 28 towards towards ADP IN _ _ _ _ _ 29 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 11422 # text = This induction of C/EBP epsilon mRNA expression is transcriptionally mediated and occurs in the absence of synthesis of additional protein factors. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 EBP EBP PROPN NNP Number=Sing _ _ _ _ 7 epsilon epsilon PROPN NNP Number=Sing _ _ _ _ 8 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 transcriptionally transcriptionally ADV RB _ _ _ _ _ 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 occurs occur NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 absence absence NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 additional additional ADJ JJ Degree=Pos _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 11423 # text = We suspect that the C/EBP epsilon promoter/enhancer contains a retinoic acid-response element that is directly stimulated by retinoids. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 suspect suspect VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 C/ c/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 EBP Ebp NOUN NN Number=Sing _ _ _ _ 7 epsilon epsilon ADP IN _ _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 / / PUNCT , _ _ _ _ SpaceAfter=No 10 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 11 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 14 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 response response NOUN NN Number=Sing _ _ _ _ 17 element element NOUN NN Number=Sing _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 directly directly ADV RB _ _ _ _ _ 21 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 retinoids retinoid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11424 # text = Document 0030012573 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012573 0030012573 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11425 # text = Signalling via CD28 of human naive neonatal T lymphocytes. 1 Signalling Signall VERB VBG VerbForm=Ger _ _ _ _ 2 via via ADP IN _ _ _ _ _ 3 CD28 Cd28 PROPN NNP Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 naive naive ADJ JJ Degree=Pos _ _ _ _ 7 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11426 # text = Accessory molecules play a crucial role in the development of the T cell response to antigenic challenge. 1 Accessory Accessory ADJ JJ Degree=Pos _ _ _ _ 2 molecules molecule NOUN NNS Number=Plur _ _ _ _ 3 play play VERB VB VerbForm=Inf _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 development development NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 T T PROPN NNP Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 response response NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 antigenic antigenic ADJ JJ Degree=Pos _ _ _ _ 17 challenge challenge NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 11427 # text = We have examined the role of CD28 in modulating the 'naive' neonatal T cell response to anti-CD2-mediated activation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 8 in in SCONJ IN _ _ _ _ _ 9 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 12 naive naive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 ' ' PUNCT '' _ _ _ _ _ 14 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 response response NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 anti-CD2 anti-CD2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 11428 # text = To compare the role of CD28, neonatal and adult T cells were stimulated with a pair of mitogenic anti-CD2 antibodies in the presence or absence of anti-CD28 MoAb. 1 To to PART TO _ _ _ _ _ 2 compare compare VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 CD28 CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 adult adult ADJ JJ Degree=Pos _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 pair pair NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 20 anti-CD2 anti-CD2 NUM CD NumType=Card _ _ _ _ 21 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 presence presence NOUN NN Number=Sing _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 absence absence NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 anti-CD28 anti-CD28 NUM CD NumType=Card _ _ _ _ 29 MoAb MoAb NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 11429 # text = With anti-CD2 alone, neonatal T cells proliferated slightly but produced no detectable IL-2, whereas adult T cells proliferated vigorously, with significant IL-2 production. 1 With with ADP IN _ _ _ _ _ 2 anti-CD2 anti-CD2 NUM CD NumType=Card _ _ _ _ 3 alone alone ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 proliferated proliferate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 slightly slightly ADV RB _ _ _ _ _ 10 but but CCONJ CC _ _ _ _ _ 11 produced produce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 no no DET DT _ _ _ _ _ 13 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 14 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 whereas whereas SCONJ IN _ _ _ _ _ 19 adult adult ADJ JJ Degree=Pos _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 proliferated proliferate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 vigorously vigorously ADV RB _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 significant significant ADJ JJ Degree=Pos _ _ _ _ 27 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 2 2 NUM CD NumType=Card _ _ _ _ 30 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11430 # text = Costimulation with anti-CD28 MoAb greatly enhanced the proliferative response of neonatal T cells to levels equivalent to those of adult T cells, whereas adult T cells showed only slight increases. 1 Costimulation Costimulation NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 anti-CD28 anti-CD28 NUM CD NumType=Card _ _ _ _ 4 MoAb MoAb PROPN NNP Number=Sing _ _ _ _ 5 greatly greatly ADV RB _ _ _ _ _ 6 enhanced enhance VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 9 response response NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 levels level NOUN NNS Number=Plur _ _ _ _ 16 equivalent equivalent ADJ JJ Degree=Pos _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 adult adult ADJ JJ Degree=Pos _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 whereas whereas SCONJ IN _ _ _ _ _ 25 adult adult ADJ JJ Degree=Pos _ _ _ _ 26 T t PROPN NNP Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 only only ADV RB _ _ _ _ _ 30 slight slight ADJ JJ Degree=Pos _ _ _ _ 31 increases increase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 11431 # text = Although IL-2 secretion was increased in the presence of anti-CD28 MoAb, neonatal T cell IL-2 production remained lower than in adults. 1 Although although SCONJ IN _ _ _ _ _ 2 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 secretion secretion NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 presence presence NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 anti-CD28 anti-CD28 NUM CD NumType=Card _ _ _ _ 13 MoAb MoAb NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cell cell PROPN NNP Number=Sing _ _ _ _ 18 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 production production NOUN NN Number=Sing _ _ _ _ 22 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 lower lower ADJ JJR Degree=Cmp _ _ _ _ 24 than than ADP IN _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 adults adult NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 11432 # text = In contrast, enhancement of IL-2 mRNA expression in neonates was similar to adult levels. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 enhancement enhancement NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 neonates neonate NOUN NNS Number=Plur _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 similar similar ADJ JJ Degree=Pos _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 adult adult VERB VB VerbForm=Inf _ _ _ _ 17 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 11433 # text = Anti-CD28 MoAb costimulation increased NF kappa B levels in neonates, albeit to levels lower than that of adults. 1 Anti-CD28 Anti-CD28 NUM CD NumType=Card _ _ _ _ 2 MoAb MoAb PROPN NNP Number=Sing _ _ _ _ 3 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 4 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ _ 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B b ADJ JJ Degree=Pos _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 neonates neonate NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 albeit albeit SCONJ IN _ _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 levels level VERB VB VerbForm=Inf _ _ _ _ 15 lower lower ADJ JJR Degree=Cmp _ _ _ _ 16 than than ADP IN _ _ _ _ _ 17 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 adults adult NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 11434 # text = The cellular mechanism governing the diminished proliferative response of neonatal T lymphocytes to anti-CD2 may therefore be due to decreased NF kappa B induction, reduced IL-2 mRNA expression and deficient IL-2 production. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 3 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 4 governing govern VERB VBG VerbForm=Ger _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 diminished diminish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 8 response response NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 neonatal neonatal ADJ JJ Degree=Pos _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 anti-CD2 anti-cd2 NUM CD NumType=Card _ _ _ _ 15 may may AUX MD VerbForm=Fin _ _ _ _ 16 therefore therefore ADV RB _ _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 due due ADP IN _ _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ _ 22 kappa kappa PROPN NNP Number=Sing _ _ _ _ 23 B b PROPN NNP Number=Sing _ _ _ _ 24 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 2 2 NUM CD NumType=Card _ _ _ _ 30 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 31 expression expression NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 34 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 2 2 NUM CD NumType=Card _ _ _ _ 37 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 11435 # text = Although anti-CD28 MoAb costimulation enhances all of the above signals, NF kappa B and IL-2 levels remain lower than in adults, suggesting the need for further activation requirements in the neonate. 1 Although although SCONJ IN _ _ _ _ _ 2 anti-CD28 anti-CD28 PROPN NNP Number=Sing _ _ _ _ 3 MoAb MoAb PROPN NNP Number=Sing _ _ _ _ 4 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 5 enhances enhance NOUN NNS Number=Plur _ _ _ _ 6 all all DET DT _ _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 above above ADJ JJ Degree=Pos _ _ _ _ 10 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ _ 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ 14 B B PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 levels level NOUN NNS Number=Plur _ _ _ _ 20 remain remain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 lower lower ADJ JJR Degree=Cmp _ _ _ _ 22 than than ADP IN _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 adults adult NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 need need NOUN NN Number=Sing _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 further further ADJ JJ Degree=Pos _ _ _ _ 31 activation activation NOUN NN Number=Sing _ _ _ _ 32 requirements requirement NOUN NNS Number=Plur _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 neonate neonate NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11436 # text = Document 0030012579 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012579 0030012579 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11437 # text = c-Rel and p65 subunits bind to an upstream NF-kappaB site in human granulocyte macrophage-colony stimulating factor promoter involved in phorbol ester response in 5637 cells. 1 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 Rel Rel NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 p65 p65 NUM CD NumType=Card _ _ _ _ 6 subunits subunit NOUN NNS Number=Plur _ _ _ _ 7 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 granulocyte granulocyte NOUN NN Number=Sing _ _ _ _ 18 macrophage macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 colony colony NOUN NN Number=Sing _ _ _ _ 21 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ _ 24 involved involved VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 27 ester ester NOUN NN Number=Sing _ _ _ _ 28 response response NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 5637 5637 NUM CD NumType=Card _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11438 # text = To further clarify the complex transcriptional regulation of the human GM-CSF gene, which was extensively investigated in activated T cells, we have studied the role of an upstream NF-kappaB like site in the 5637 non-lymphoid cell line, which derives from a bladder carcinoma and constitutively produces GM-CSF. 1 To to PART TO _ _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 clarify clarify VERB VB VerbForm=Inf _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 complex complex ADJ JJ Degree=Pos _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 regulation regulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 CSF CSF PROPN NNP Number=Sing _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 extensively extensively ADV RB _ _ _ _ _ 19 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 26 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 studied studie VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 role role NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 33 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 36 like like ADP IN _ _ _ _ _ 37 site site NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 5637 5637 NUM CD NumType=Card _ _ _ _ 41 non-lymphoid non-lymphoid ADJ JJ Degree=Pos _ _ _ _ 42 cell cell NOUN NN Number=Sing _ _ _ _ 43 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 which which PRON WDT PronType=Rel _ _ _ _ 46 derives derive VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 47 from from ADP IN _ _ _ _ _ 48 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 49 bladder bladder NOUN NN Number=Sing _ _ _ _ 50 carcinoma carcinoma NOUN NN Number=Sing _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 constitutively constitutively ADV RB _ _ _ _ _ 53 produces produce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 54 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 55 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 56 CSF CSF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 11439 # text = This sequence, named the A element, has an active role on GM-CSF transcription and is responsive to the tumor promoter PMA in transient transfection experiments. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 named name VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 active active ADJ JJ Degree=Pos _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 CSF CSF PROPN NNP Number=Sing _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 tumor tumor NOUN NN Number=Sing _ _ _ _ 24 promoter promoter NOUN NN Number=Sing _ _ _ _ 25 PMA Pma NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 transient transient ADJ JJ Degree=Pos _ _ _ _ 28 transfection transfection NOUN NN Number=Sing _ _ _ _ 29 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 11440 # text = We describe here a heterodimeric binding complex of NF-kappaB subunits (c-Rel and p65) which is identical to the one obtained using the HIV-LTR-kappaB site as recognition sequence and different from the one (c-Rel and p50) observed with nuclear extracts from Mo T-lymphoid HTLV-II infected cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 describe describe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 heterodimeric heterodimeric NOUN NN Number=Sing _ _ _ _ 6 binding binding VERB VBG VerbForm=Ger _ _ _ _ 7 complex complex NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 12 subunits subunit NOUN NNS Number=Plur _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 Rel Rel NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 which which PRON WDT PronType=Rel _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 identical identical ADJ JJ Degree=Pos _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 one one NOUN NN Number=Sing _ _ _ _ 26 obtained obtain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 using use VERB VBG VerbForm=Ger _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 LTR-kappaB Ltr-kappab PROPN NNP Number=Sing _ _ _ _ 32 site site NOUN NN Number=Sing _ _ _ _ 33 as as ADP IN _ _ _ _ _ 34 recognition recognition NOUN NN Number=Sing _ _ _ _ 35 sequence sequence NOUN NN Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 different different ADJ JJ Degree=Pos _ _ _ _ 38 from from ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 one one NOUN NN Number=Sing _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 Rel Rel NOUN NN Number=Sing _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 ) ) PUNCT -RRB- _ _ _ _ _ 48 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 49 with with ADP IN _ _ _ _ _ 50 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 51 extracts extract NOUN NNS Number=Plur _ _ _ _ 52 from from ADP IN _ _ _ _ _ 53 Mo mo PROPN NNP Number=Sing _ _ _ _ 54 T- T- PUNCT , _ _ _ _ SpaceAfter=No 55 lymphoid lymphoid VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 56 HTLV Htlv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 II ii NUM CD NumType=Card _ _ _ _ 59 infected infect ADJ JJ Degree=Pos _ _ _ _ 60 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11441 # text = Document 0030012580 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012580 0030012580 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11442 # text = Ubiquitin-mediated processing of NF-kappa B transcriptional activator precursor p105. 1 Ubiquitin- Ubiquitin- SYM NFP _ _ _ _ SpaceAfter=No 2 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 processing processing NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B b PROPN NNP Number=Sing _ _ _ _ 9 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 10 activator activator NOUN NN Number=Sing _ _ _ _ 11 precursor precursor NOUN NN Number=Sing _ _ _ _ 12 p105 p105 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 11443 # text = Reconstitution of a cell-free system and identification of the ubiquitin-carrier protein, E2, and a novel ubiquitin-protein ligase, E3, involved in conjugation. 1 Reconstitution Reconstitution NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 free free ADJ JJ Degree=Pos _ _ _ _ 7 system system NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 identification identification NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 ubiquitin- ubiquitin- SYM NFP _ _ _ _ SpaceAfter=No 13 carrier carrier NOUN NN Number=Sing _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 E2 e2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 novel novel NOUN NN Number=Sing _ _ _ _ 21 ubiquitin- ubiquitin- PUNCT , _ _ _ _ SpaceAfter=No 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 ligase ligase NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 E3 E3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 involved involve ADJ JJ Degree=Pos _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 conjugation conjugation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11444 # text = In most cases, the transcriptional factor NF-kappa B is a heterodimer consisting of two subunits, p50 and p65, which are encoded by two distinct genes of the Rel family. 1 In in ADP IN _ _ _ _ _ 2 most most ADJ JJS Degree=Sup _ _ _ _ 3 cases case NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 15 consisting consisting NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 two two NUM CD NumType=Card _ _ _ _ 18 subunits subunit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 p50 p50 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 encoded encod VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 two two NUM CD NumType=Card _ _ _ _ 29 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 30 genes gene NOUN NNS Number=Plur _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 Rel Rel PROPN NNP Number=Sing _ _ _ _ 34 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 11445 # text = p50 is translated as a precursor of 105 kDa. 1 p50 p50 NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 translated translate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 as as ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 precursor precursor NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 105 105 NUM CD NumType=Card _ _ _ _ 9 kDa kDa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 11446 # text = The C-terminal domain of the precursor is rapidly degraded, forming the mature p50 subunit consisted of the N-terminal region of the molecule. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 C- C- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 terminal terminal NOUN NN Number=Sing _ _ _ _ 4 domain domain NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 precursor precursor NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 rapidly rapidly ADV RB _ _ _ _ _ 10 degraded degrad VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 forming form VERB VBG VerbForm=Ger _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 mature mature ADJ JJ Degree=Pos _ _ _ _ 15 p50 p50 NOUN NN Number=Sing _ _ _ _ 16 subunit subunit NOUN NN Number=Sing _ _ _ _ 17 consisted consist VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 terminal terminal NOUN NN Number=Sing _ _ _ _ 22 region region NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11447 # text = The mechanism of generation of p50 is not known. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 generation generation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 p50 p50 NUM CD NumType=Card _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 known known ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 11448 # text = It has been suggested that the ubiquitin-proteasome system is involved in the process; however, the specific enzymes involved and the mechanism of limited proteolysis, in which half of the molecule is spared, have been obscure. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 4 suggested suggest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 ubiquitin- ubiquitin- SYM SYM _ _ _ _ SpaceAfter=No 8 proteasome proteasome ADJ JJ Degree=Pos _ _ _ _ 9 system system NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 involved involved ADJ JJ Degree=Pos _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 process process NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ; ; PUNCT , _ _ _ _ _ 16 however however ADV RB _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 enzymes enzyme NOUN NNS Number=Plur _ _ _ _ 21 involved involve ADJ JJ Degree=Pos _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 limited limited ADJ JJ Degree=Pos _ _ _ _ 27 proteolysis proteolysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 which which PRON WDT PronType=Rel _ _ _ _ 31 half half NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 molecule molecule NOUN NN Number=Sing _ _ _ _ 35 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 spared spare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 39 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 40 obscure obscure ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 11449 # text = Palombella and colleagues (Palombella, V.J., Rando, O.J., Goldberg, A.L., and Maniatis, T.(1994) Cell 78, 773-785) have shown that ubiquitin is required for the processing in a cell-free system of a truncated, artificially constructed, 60-kDa precursor. 1 Palombella Palombella PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 colleagues colleague NOUN NNS Number=Plur _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 Palombella Palombella PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 V.J. V.J. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 Rando Rando PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 O.J. O.J. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 Goldberg Goldberg PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 A.L. A.L. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 Maniatis Maniatis PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 T. T. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 1994 1994 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 Cell cell NOUN NN Number=Sing _ _ _ _ 25 78 78 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 773-785 773-785 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 32 ubiquitin ubiquitin NOUN NN Number=Sing _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 processing processing NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 free free ADJ JJ Degree=Pos _ _ _ _ 43 system system NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 46 truncated truncated ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 artificially artificially ADV RB _ _ _ _ _ 49 constructed construct VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 50 , , PUNCT , _ _ _ _ _ 51 60 60 NUM CD NumType=Card _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 kDa kDa NOUN NN Number=Sing _ _ _ _ 54 precursor precursor NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 11450 # text = They have also shown that proteasome inhibitors block the processing both in vitro and in vivo. 1 They they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 proteasome proteasome DET DT _ _ _ _ _ 7 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 8 block block VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 processing processing NOUN NN Number=Sing _ _ _ _ 11 both both CCONJ CC _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 vitro vitro NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 11451 # text = In this study, we demonstrate reconstitution of a cell-free processing system and demonstrate directly that: (a) the ubiquitin-proteasome system is involved in processing of the intact p105 precursor, (b) conjugation of ubiquitin to the precursor is an essential intermediate step in the processing, (c) the recently discovered novel species of the ubiquitin-carrier protein, E2-F1, that is involved in the conjugation and degradation of p53, is also required for the limited processing of the p105 precursor, and (d) a novel, approximately 320-kDa species of ubiquitin-protein ligase, is involved in the process. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 reconstitution reconstitution NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 free free ADJ JJ Degree=Pos _ _ _ _ 13 processing processing NOUN NN Number=Sing _ _ _ _ 14 system system NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 directly directly ADV RB _ _ _ _ _ 18 that that SCONJ IN _ _ _ _ SpaceAfter=No 19 : : PUNCT : _ _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 a a X LS _ _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 ubiquitin- ubiquitin- SYM SYM _ _ _ _ SpaceAfter=No 25 proteasome proteasome ADJ JJ Degree=Pos _ _ _ _ 26 system system NOUN NN Number=Sing _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 involved involved ADJ JJ Degree=Pos _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 processing processing NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 intact intact NOUN NN Number=Sing _ _ _ _ 34 p105 p105 NOUN NN Number=Sing _ _ _ _ 35 precursor precursor NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 b b X LS _ _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 conjugation conjugation NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 ubiquitin ubiquitin NOUN NN Number=Sing _ _ _ _ 43 to to ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 precursor precursor NOUN NN Number=Sing _ _ _ _ 46 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 47 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 48 essential essential ADJ JJ Degree=Pos _ _ _ _ 49 intermediate intermediate ADJ JJ Degree=Pos _ _ _ _ 50 step step NOUN NN Number=Sing _ _ _ _ 51 in in ADP IN _ _ _ _ _ 52 the the DET DT Definite=Def|PronType=Art _ _ _ _ 53 processing processing NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 , , PUNCT , _ _ _ _ _ 55 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 56 c c X LS _ _ _ _ SpaceAfter=No 57 ) ) PUNCT -RRB- _ _ _ _ _ 58 the the DET DT Definite=Def|PronType=Art _ _ _ _ 59 recently recently ADV RB _ _ _ _ _ 60 discovered discover VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 61 novel novel NOUN NN Number=Sing _ _ _ _ 62 species species NOUN NNS Number=Plur _ _ _ _ 63 of of ADP IN _ _ _ _ _ 64 the the DET DT Definite=Def|PronType=Art _ _ _ _ 65 ubiquitin- ubiquitin- SYM NFP _ _ _ _ SpaceAfter=No 66 carrier carrier NOUN NN Number=Sing _ _ _ _ 67 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 68 , , PUNCT , _ _ _ _ _ 69 E2- e2- NOUN NN Number=Sing _ _ _ SpaceAfter=No 70 F1 F1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 71 , , PUNCT , _ _ _ _ _ 72 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 73 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 74 involved involved ADJ JJ Degree=Pos _ _ _ _ 75 in in ADP IN _ _ _ _ _ 76 the the DET DT Definite=Def|PronType=Art _ _ _ _ 77 conjugation conjugation NOUN NN Number=Sing _ _ _ _ 78 and and CCONJ CC _ _ _ _ _ 79 degradation degradation NOUN NN Number=Sing _ _ _ _ 80 of of ADP IN _ _ _ _ _ 81 p53 p53 NOUN NN Number=Sing _ _ _ SpaceAfter=No 82 , , PUNCT , _ _ _ _ _ 83 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 84 also also ADV RB _ _ _ _ _ 85 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 86 for for ADP IN _ _ _ _ _ 87 the the DET DT Definite=Def|PronType=Art _ _ _ _ 88 limited limited ADJ JJ Degree=Pos _ _ _ _ 89 processing processing NOUN NN Number=Sing _ _ _ _ 90 of of ADP IN _ _ _ _ _ 91 the the DET DT Definite=Def|PronType=Art _ _ _ _ 92 p105 p105 NOUN NN Number=Sing _ _ _ _ 93 precursor precursor NOUN NN Number=Sing _ _ _ SpaceAfter=No 94 , , PUNCT , _ _ _ _ _ 95 and and CCONJ CC _ _ _ _ _ 96 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 97 d would PROPN NNP Number=Sing _ _ _ SpaceAfter=No 98 ) ) PUNCT -RRB- _ _ _ _ _ 99 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 100 novel novel NOUN NN Number=Sing _ _ _ SpaceAfter=No 101 , , PUNCT , _ _ _ _ _ 102 approximately approximately ADV RB _ _ _ _ _ 103 320 320 NUM CD NumType=Card _ _ _ SpaceAfter=No 104 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 105 kDa kDa NOUN NN Number=Sing _ _ _ _ 106 species species NOUN NNS Number=Plur _ _ _ _ 107 of of ADP IN _ _ _ _ _ 108 ubiquitin-protein ubiquitin-protein ADJ JJ Degree=Pos _ _ _ _ 109 ligase ligase NOUN NN Number=Sing _ _ _ SpaceAfter=No 110 , , PUNCT , _ _ _ _ _ 111 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 112 involved involved ADJ JJ Degree=Pos _ _ _ _ 113 in in ADP IN _ _ _ _ _ 114 the the DET DT Definite=Def|PronType=Art _ _ _ _ 115 process process NOUN NN Number=Sing _ _ _ SpaceAfter=No 116 . . PUNCT . _ _ _ _ _ # sent_id = 11452 # text = This novel enzyme is distinct from E6-AP, the p53-conjugating ligase, and from E3 alpha, the "N-end rule" ligase. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 novel novel NOUN NN Number=Sing _ _ _ _ 3 enzyme enzyme NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 E6 e6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 AP ap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 p53 p53 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 -conjugating -conjugat VERB VBG VerbForm=Ger _ _ _ _ 14 ligase ligase NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 E3 E3 NOUN NN Number=Sing _ _ _ _ 19 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 " " PUNCT `` _ _ _ _ SpaceAfter=No 23 N and CCONJ CC Abbr=Yes _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 end end NOUN NN Number=Sing _ _ _ _ 26 rule rule NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 " " PUNCT '' _ _ _ _ _ 28 ligase ligase NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11453 # text = Document 0030012586 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012586 0030012586 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11454 # text = The macrophage transcription factor PU.1 directs tissue-specific expression of the macrophage colony-stimulating factor receptor. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 PU.1 PU.1 NUM CD NumType=Card _ _ _ _ 6 directs direct NOUN NNS Number=Plur _ _ _ _ 7 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 14 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 -stimulating -stimulat VERB VBG VerbForm=Ger _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11455 # text = The macrophage colony-stimulating factor (M-CSF) receptor is expressed in a tissue-specific fashion from two distinct promoters in monocytes/macrophages and the placenta. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 3 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 stimulating stimulating NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 CSF Csf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 fashion fashion NOUN NN Number=Sing _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 two two NUM CD NumType=Card _ _ _ _ 23 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 24 promoters promoter NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 / / PUNCT , _ _ _ _ SpaceAfter=No 28 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 placenta placenta NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 11456 # text = In order to further understand the transcription factors which play a role in the commitment of multipotential progenitors to the monocyte/macrophage lineage, we have initiated an investigation of the factors which activate the M-CSF receptor very early during the monocyte differentiation process. 1 In in ADP IN _ _ _ _ _ 2 order order NOUN NN Number=Sing _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 further further ADV RB _ _ _ _ _ 5 understand understand VERB VB VerbForm=Inf _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 which which PRON WDT PronType=Rel _ _ _ _ 10 play play VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 commitment commitment NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 multipotential multipotential ADJ JJ Degree=Pos _ _ _ _ 18 progenitors progenitor NOUN NNS Number=Plur _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 / / PUNCT , _ _ _ _ SpaceAfter=No 23 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 24 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 27 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 initiated initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 investigation investigation NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 factors factor NOUN NNS Number=Plur _ _ _ _ 34 which which PRON WDT PronType=Rel _ _ _ _ 35 activate activate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 CSF Csf NOUN NN Number=Sing _ _ _ _ 40 receptor receptor NOUN NN Number=Sing _ _ _ _ 41 very very ADV RB _ _ _ _ _ 42 early early ADV RB Degree=Pos _ _ _ _ 43 during during ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 46 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 47 process process NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 11457 # text = Here we demonstrate that the human monocytic M-CSF receptor promoter directs reporter gene activity in a tissue-specific fashion. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 8 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 CSF Csf NOUN NN Number=Sing _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 promoter promoter ADV RB _ _ _ _ _ 13 directs direct VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 reporter reporter NOUN NN Number=Sing _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 specific specific ADJ JJ Degree=Pos _ _ _ _ 22 fashion fashion NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 11458 # text = Since one of the few transcription factors which have been implicated in the regulation of monocyte genes is the macrophage- and B-cell-specific PU.1 transcription factor, we investigated whether PU.1 binds and activates the M-CSF receptor promoter. 1 Since since ADP IN _ _ _ _ _ 2 one one NUM CD NumType=Card _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 few few ADJ JJ Degree=Pos _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factors factor NOUN NNS Number=Plur _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 11 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 regulation regulation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 macrophage macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 B- B- NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 specific specific ADJ JJ Degree=Pos _ _ _ _ 27 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 32 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 33 whether whether SCONJ IN _ _ _ _ _ 34 PU.1 PU.1 PROPN NNP Number=Sing _ _ _ _ 35 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 CSF Csf NOUN NN Number=Sing _ _ _ _ 42 receptor receptor NOUN NN Number=Sing _ _ _ _ 43 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 11459 # text = Here we demonstrate that both in vitro-translated PU.1 and PU.1 from nuclear extracts bind to a specific site in the M-CSF receptor promoter just upstream from the major transcription initiation site. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 both both DET DT _ _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 vitro vitro NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 translated translated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 PU.1 Pu.1 PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 PU.1 Pu.1 PROPN NNP Number=Sing _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 extracts extract NOUN NNS Number=Plur _ _ _ _ 16 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 site site NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 CSF Csf NOUN NN Number=Sing _ _ _ _ 26 receptor receptor NOUN NN Number=Sing _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ _ 28 just just ADV RB _ _ _ _ _ 29 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 30 from from ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 major major ADJ JJ Degree=Pos _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 initiation initiation NOUN NN Number=Sing _ _ _ _ 35 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 11460 # text = Mutations in this site which eliminate PU.1 binding decrease M-CSF receptor promoter activity significantly in macrophage cell lines only. 1 Mutations Mutation NOUN NNS Number=Plur _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 site site NOUN NN Number=Sing _ _ _ _ 5 which which PRON WDT PronType=Rel _ _ _ _ 6 eliminate eliminate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 PU.1 PU.1 NUM CD NumType=Card _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 decrease decrease NOUN NN Number=Sing _ _ _ _ 10 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 CSF Csf NOUN NN Number=Sing _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 significantly significantly ADV RB _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 lines line NOUN NNS Number=Plur _ _ _ _ 21 only only ADV RB _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 11461 # text = Furthermore, PU.1 transactivates the M-CSF receptor promoter in nonmacrophage cells. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 PU.1 PU.1 PROPN NNP Number=Sing _ _ _ _ 4 transactivates transactivate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 CSF Csf NOUN NN Number=Sing _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 nonmacrophage nonmacrophage ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 11462 # text = These results suggest that PU.1 plays a major role in macrophage gene regulation and development by directing the expression of a receptor for a key macrophage growth factor. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 PU.1 Pu.1 PROPN NNP Number=Sing _ _ _ _ 6 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 major major ADJ JJ Degree=Pos _ _ _ _ 9 role role NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 regulation regulation NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 development development NOUN NN Number=Sing _ _ _ _ 16 by by SCONJ IN _ _ _ _ _ 17 directing direct VERB VBG VerbForm=Ger _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 receptor receptor NOUN NN Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 key key ADJ JJ Degree=Pos _ _ _ _ 26 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 27 growth growth NOUN NN Number=Sing _ _ _ _ 28 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11463 # text = Document 0030012588 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012588 0030012588 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11464 # text = The severe phenotype of females with tiny ring X chromosomes is associated with inability of these chromosomes to undergo X inactivation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 severe severe ADJ JJ Degree=Pos _ _ _ _ 3 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 females female NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 tiny tiny ADJ JJ Degree=Pos _ _ _ _ 8 ring ring NOUN NN Number=Sing _ _ _ _ 9 X x SYM SYM _ _ _ _ _ 10 chromosomes chromosome NOUN NNS Number=Plur _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 inability inability NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 17 chromosomes chromosome NOUN NNS Number=Plur _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 undergo undergo VERB VB VerbForm=Inf _ _ _ _ 20 X x ADP IN _ _ _ _ _ 21 inactivation inactivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11465 # text = Mental retardation and a constellation of congenital malformations not usually associated with Turner syndrome are seen in some females with a mosaic 45,X/46,X,r(X) karyotype. 1 Mental mental ADJ JJ Degree=Pos _ _ _ _ 2 retardation retardation NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 constellation constellation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 congenital congenital ADJ JJ Degree=Pos _ _ _ _ 8 malformations malformation NOUN NNS Number=Plur _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 usually usually ADV RB _ _ _ _ _ 11 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 Turner Turner NOUN NN Number=Sing _ _ _ _ 14 syndrome syndrome NOUN NN Number=Sing _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 some some DET DT _ _ _ _ _ 19 females female NOUN NNS Number=Plur _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 mosaic mosaic NOUN NN Number=Sing _ _ _ _ 23 45,X 45,X ADP IN _ _ _ _ SpaceAfter=No 24 /46,X /46,X NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ,r ,r NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 X x SYM SYM _ _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 karyotype karyotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 11466 # text = Studies of these females show that the XIST locus on their tiny ring X chromosomes is either not present or not expressed. 1 Studies study NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 females female NOUN NNS Number=Plur _ _ _ _ 5 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 XIST Xist NOUN NN Number=Sing _ _ _ _ 9 locus locus NOUN NN Number=Sing _ _ _ _ 10 on on ADP IN _ _ _ _ _ 11 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 12 tiny tiny ADJ JJ Degree=Pos _ _ _ _ 13 ring ring NOUN NN Number=Sing _ _ _ _ 14 X x SYM SYM _ _ _ _ _ 15 chromosomes chromosome NOUN NNS Number=Plur _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 either either ADV RB _ _ _ _ _ 18 not not PART RB _ _ _ _ _ 19 present present ADJ JJ Degree=Pos _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 expressed expressed VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 11467 # text = As XIST transcription is well correlated with inactivation of the X chromosome in female somatic cells and spermatogonia, nonexpression of the locus even when it is present suggests that these chromosomes are transcriptionally active. 1 As as ADP IN _ _ _ _ _ 2 XIST Xist ADJ JJS Degree=Sup _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 well well ADV RB Degree=Pos _ _ _ _ 6 correlated correlate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 inactivation inactivation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 X x PROPN NNP Number=Sing _ _ _ _ 12 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 female female ADJ JJ Degree=Pos _ _ _ _ 15 somatic somatic ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 spermatogonia spermatogonia NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 nonexpression nonexpression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 locus locus NOUN NN Number=Sing _ _ _ _ 24 even even ADV RB _ _ _ _ _ 25 when when ADV WRB PronType=Int _ _ _ _ 26 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 27 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 present present ADJ JJ Degree=Pos _ _ _ _ 29 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 that that SCONJ IN _ _ _ _ _ 31 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 32 chromosomes chromosome NOUN NNS Number=Plur _ _ _ _ 33 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 transcriptionally transcriptionally ADV RB _ _ _ _ _ 35 active active ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 11468 # text = We examined the transcriptional activity of ring X chromosomes lacking XIST expression (XISTE-), from three females with severe phenotypes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 ring re NOUN NN Number=Sing _ _ _ _ 8 X X SYM SYM _ _ _ _ _ 9 chromosomes chromosome NOUN NNS Number=Plur _ _ _ _ 10 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 11 XIST Xist ADJ JJ Degree=Pos _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 XISTE Xiste NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 three three NUM CD NumType=Card _ _ _ _ 20 females female NOUN NNS Number=Plur _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 severe severe ADJ JJ Degree=Pos _ _ _ _ 23 phenotypes phenotype NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 11469 # text = The two tiny ring X chromosomes studied with an antibody specific for the acetylated isoforms of histone H4 marking transcribed chromatin domains were labeled at a level consistent with their being active. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 tiny tiny ADJ JJ Degree=Pos _ _ _ _ 4 ring re NOUN NN Number=Sing _ _ _ _ 5 X x SYM SYM _ _ _ _ _ 6 chromosomes chromosome NOUN NNS Number=Plur _ _ _ _ 7 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 antibody antibody ADJ JJ Degree=Pos _ _ _ _ 11 specific specific ADJ JJ Degree=Pos _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 acetylated acetylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 histone histone NOUN NN Number=Sing _ _ _ _ 18 H4 H4 NOUN NN Number=Sing _ _ _ _ 19 marking marking NOUN NN Number=Sing _ _ _ _ 20 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 chromatin chromatin NOUN NN Number=Sing _ _ _ _ 22 domains domain NOUN NNS Number=Plur _ _ _ _ 23 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 labeled label VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 at at ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 level level NOUN NN Number=Sing _ _ _ _ 28 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 31 being be AUX VBG VerbForm=Ger _ _ _ _ 32 active active ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 11470 # text = We also examined tow of the XISTE- ring chromosomes to determine whether genes that are normally silent on an inactive X are expressed from these chromosomes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 tow tow NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 XISTE XISTE NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ _ 9 ring re NOUN NN Number=Sing _ _ _ _ 10 chromosomes chromosome NOUN NNS Number=Plur _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 determine determine VERB VB VerbForm=Inf _ _ _ _ 13 whether whether SCONJ IN _ _ _ _ _ 14 genes gene NOUN NNS Number=Plur _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 normally normally ADV RB _ _ _ _ _ 18 silent silent ADJ JJ Degree=Pos _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 22 X x NOUN NN Number=Sing _ _ _ _ 23 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 from from ADP IN _ _ _ _ _ 26 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 27 chromosomes chromosome NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 11471 # text = Analyses of hybrid cells show that TIMP, ZXDA, and ZXDB loci on the proximal short arm, and AR and PHKA1 loci on the long arm, are well expressed from the tiny ring X chromosome lacking XIST DNA. 1 Analyses analysis NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 hybrid hybrid ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 TIMP TIMP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 ZXDA ZXDA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 ZXDB ZXDB PROPN NNP Number=Sing _ _ _ _ 13 loci loci NOUN NN Number=Sing _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 17 short short ADJ JJ Degree=Pos _ _ _ _ 18 arm arm NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 AR be NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 PHKA1 PHKA1 NUM CD NumType=Card _ _ _ _ 24 loci loci NOUN NN Number=Sing _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 long long ADJ JJ Degree=Pos _ _ _ _ 28 arm arm NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 well well ADV RB Degree=Pos _ _ _ _ 32 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 from from ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 tiny tiny ADJ JJ Degree=Pos _ _ _ _ 36 ring ring NOUN NN Number=Sing _ _ _ _ 37 X x SYM SYM _ _ _ _ _ 38 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 39 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 40 XIST Xist ADJ JJ Degree=Pos _ _ _ _ 41 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 11472 # text = Studies of the ring chromosome that has XIST DNA but does not transcribe it show that its AR allele is transcribed along with the one on the normal X allele. 1 Studies study NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 ring ring NOUN NN Number=Sing _ _ _ _ 5 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 XIST Xist NOUN NN Number=Sing _ _ _ _ 9 DNA dna NOUN NN Number=Sing _ _ _ _ 10 but but CCONJ CC _ _ _ _ _ 11 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 transcribe transcribe VERB VB VerbForm=Inf _ _ _ _ 14 it it PRON PRP Case=Acc|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 15 show show VERB VB VerbForm=Inf _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 AR ar NOUN NN Number=Sing _ _ _ _ 19 allele allele NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 along along ADP IN _ _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 one one NOUN NN Number=Sing _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 normal normal ADJ JJ Degree=Pos _ _ _ _ 29 X x NOUN NN Number=Sing _ _ _ _ 30 allele allele NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11473 # text = (ABSTRACT TRUNCATED AT 250 WORDS) 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 ABSTRACT ABSTRACT X GW _ _ _ _ _ 3 TRUNCATED Truncate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 AT at ADV RB _ _ _ _ _ 5 250 250 NUM CD NumType=Card _ _ _ _ 6 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11474 # text = Document 0030012605 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012605 0030012605 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11475 # text = Various modes of basic helix-loop-helix protein-mediated regulation of murine leukemia virus transcription in lymphoid cell lines. 1 Various various ADJ JJ Degree=Pos _ _ _ _ 2 modes mode NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 basic basic ADJ JJ Degree=Pos _ _ _ _ 5 helix-loop helix-loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 helix helix NOUN NN Number=Sing _ _ _ _ 8 protein- protein- PUNCT : _ _ _ _ SpaceAfter=No 9 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 regulation regulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 murine murine NOUN NN Number=Sing _ _ _ _ 13 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 14 virus virus NOUN NN Number=Sing _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11476 # text = The transcriptionally regulatory regions of the lymphomagenic Akv and SL3-3 murine leukemia retroviruses (MLVs) contain two types of E-box consensus motifs, CAGATG. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcriptionally transcriptionally ADV RB _ _ _ _ _ 3 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 4 regions region NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 lymphomagenic lymphomagenic ADJ JJ Degree=Pos _ _ _ _ 8 Akv Akv NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 SL3 SL3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 3 3 NUM CD NumType=Card _ _ _ _ 13 murine murine NOUN NN Number=Sing _ _ _ _ 14 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 15 retroviruses retroviruse NOUN NNS Number=Plur _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 MLVs MLVs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 contain contain VERB VB VerbForm=Inf _ _ _ _ 20 two two NUM CD NumType=Card _ _ _ _ 21 types type NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 box box NOUN NN Number=Sing _ _ _ _ 25 consensus consensus NOUN NN Number=Sing _ _ _ _ 26 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 CAGATG CAGATG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 11477 # text = One type, EA/S, is located in the upstream promoter region, and the other, E(gre), is located in a tandem repeat with enhancer properties. 1 One one NUM CD NumType=Card _ _ _ _ 2 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 EA/S EA/S PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 other other ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 E( E( X GW _ _ _ _ SpaceAfter=No 19 gre gre NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 tandem tandem NOUN NN Number=Sing _ _ _ _ 27 repeat repeat NOUN NN Number=Sing _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 30 properties property NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11478 # text = We have examined the requirements of the individual E-boxes in MLV transcriptional regulation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 requirements requirement NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 individual individual ADJ JJ Degree=Pos _ _ _ _ 9 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 boxes box NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 MLV MLV PROPN NNP Number=Sing _ _ _ _ 13 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 14 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 11479 # text = In lymphoid cell lines only, the E(gre)-binding protein complexes included ALF1 or HEB and E2A basic helix-loop-helix proteins. 1 In in ADP IN _ _ _ _ _ 2 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 lines line NOUN NNS Number=Plur _ _ _ _ 5 only only ADV RB _ _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 E e NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 gre gre NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 - - PUNCT : _ _ _ _ SpaceAfter=No 13 binding binding VERB VBG VerbForm=Ger _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 complexes complexe NOUN NNS Number=Plur _ _ _ _ 16 included include VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 ALF1 ALF1 PROPN NNP Number=Sing _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 HEB HEB PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 E2A E2A DET DT Definite=Ind|PronType=Art _ _ _ _ 22 basic basic ADJ JJ Degree=Pos _ _ _ _ 23 helix helix NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 -loop -loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 helix helix NOUN NN Number=Sing _ _ _ _ 27 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 11480 # text = Ectopic ALF1 and E2A proteins required intact E(gre) motifs for mediating transcriptional activation. 1 Ectopic Ectopic PROPN NNP Number=Sing _ _ _ _ 2 ALF1 ALF1 PROPN NNP Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 E2A E2A PROPN NNP Number=Sing _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ _ 6 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 intact intact X GW _ _ _ _ _ 8 E( E( X GW _ _ _ _ SpaceAfter=No 9 gre gre NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 motifs motif NOUN NNS Number=Plur _ _ _ _ 12 for for SCONJ IN _ _ _ _ _ 13 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 14 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 11481 # text = ALF1 transactivated transcription of Akv MLV through the two E(gre) motifs equally, whereas E2A protein required the promoter-proximal E(gre) motif. 1 ALF1 ALF1 X LS _ _ _ _ _ 2 transactivated transactivate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Akv Akv PROPN NNP Number=Sing _ _ _ _ 6 MLV MLV PROPN NNP Number=Sing _ _ _ _ 7 through through ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 two two NUM CD NumType=Card _ _ _ _ 10 E( E( NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 gre gre NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 motifs motif NOUN NNS Number=Plur _ _ _ _ 14 equally equally ADV RB _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 whereas whereas SCONJ IN _ _ _ _ _ 17 E2A E2A PROPN NNP Number=Sing _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 required require VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 24 E e NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 gre gre NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 11482 # text = In T- and B-cell lines, the E(gre) motifs were of major importance for Akv MLV transcriptional activity, while the EA/S motif had some effect. 1 In in ADP IN _ _ _ _ _ 2 T T PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 E( E( NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 gre gre NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 motifs motif NOUN NNS Number=Plur _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 major major ADJ JJ Degree=Pos _ _ _ _ 18 importance importance NOUN NN Number=Sing _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 Akv Akv PROPN NNP Number=Sing _ _ _ _ 21 MLV MLV PROPN NNP Number=Sing _ _ _ _ 22 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 while while SCONJ IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 EA/S EA/S PROPN NNP Number=Sing _ _ _ _ 28 motif motif NOUN NN Number=Sing _ _ _ _ 29 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 some some DET DT _ _ _ _ _ 31 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 11483 # text = In contrast, neither E(gre) nor EA/S motifs contributed pronouncedly to Akv MLV transcription in NIH 3T3 cells lacking DNA-binding ALF1 or HEB and E2A proteins. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 neither neither DET DT _ _ _ _ _ 5 E( E( NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 gre gre NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 nor nor CCONJ CC _ _ _ _ _ 9 EA/S EA/S ADJ JJ Degree=Pos _ _ _ _ 10 motifs motif NOUN NNS Number=Plur _ _ _ _ 11 contributed contribute VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 pronouncedly pronouncedly ADV RB _ _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 Akv Akv PROPN NNP Number=Sing _ _ _ _ 15 MLV MLV PROPN NNP Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 NIH Nih PROPN NNP Number=Sing _ _ _ _ 19 3T3 3T3 NUM CD NumType=Card _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 22 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 binding binding VERB VBG VerbForm=Ger _ _ _ _ 25 ALF1 Alf1 PROPN NNP Number=Sing _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 HEB Heb PROPN NNP Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 E2A E2a PROPN NNP Number=Sing _ _ _ _ 30 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11484 # text = The Id1 protein was found to repress ALF1 activity in vitro and in vivo. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Id1 id1 NUM CD NumType=Card _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 repress repress VERB VB VerbForm=Inf _ _ _ _ 8 ALF1 ALF1 NUM CD NumType=Card _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 vitro vitro NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 vivo. vivo. NOUN NN Number=Sing _ _ _ _ # sent_id = 11485 # text = Moreover, ectopic Id1 repressed E(gre)-directed but not EA/S-directed MLV transcription in lymphoid cell lines. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 ectopic ectopic X GW _ _ _ _ _ 4 Id1 id1 X GW _ _ _ _ _ 5 repressed repress X GW _ _ _ _ _ 6 E e X GW _ _ _ _ SpaceAfter=No 7 ( ( X GW _ _ _ _ SpaceAfter=No 8 gre gre NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 -directed -direct VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 EA/S- EA/S- PUNCT : _ _ _ _ SpaceAfter=No 14 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 MLV Mlv NOUN NN Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 11486 # text = In conclusion, E(gre) motifs and interacting basic helix-loop-helix proteins are important determinants for MLV transcriptional activity in lymphocytic cell lines. 1 In in ADP IN _ _ _ _ _ 2 conclusion conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 E( E( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 gre gre NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 motifs motif NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 interacting interact VERB VBG VerbForm=Ger _ _ _ _ 10 basic basic ADJ JJ Degree=Pos _ _ _ _ 11 helix-loop helix-loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 helix helix NOUN NN Number=Sing _ _ _ _ 14 proteins protein NOUN NNS Number=Plur _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 important important ADJ JJ Degree=Pos _ _ _ _ 17 determinants determinant NOUN NNS Number=Plur _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 MLV MLV PROPN NNP Number=Sing _ _ _ _ 20 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 lymphocytic lymphocytic ADJ JJ Degree=Pos _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11487 # text = Document 0030012607 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012607 0030012607 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11488 # text = Inhibition of IL-4-inducible gene expression in human monocytes by type I and type II interferons. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 type type NOUN NN Number=Sing _ _ _ _ 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 type type VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 II ii NUM CD NumType=Card _ _ _ _ 19 interferons interferon NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11489 # text = The Th2-type cytokines, interleukin-4 (IL-4) and interleukin-13 (IL-13), induce expression of a distinct subset of genes in human monocytes, including FcepsilonRIIb (CD23), 15-lipoxygenase, IL-1 receptor antagonist (IL-1ra), and type I and type II IL-1 receptors (IL-1R). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Th2 Th2 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 -type -type NOUN NN Number=Sing _ _ _ _ 4 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 4 4 NUM CD NumType=Card _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 interleukin interleukin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 -13 -13 NUM CD NumType=Card _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 induce induce VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 28 subset subset NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 genes gene NOUN NNS Number=Plur _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 human human ADJ JJ Degree=Pos _ _ _ _ 33 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 including include VERB VBG VerbForm=Ger _ _ _ _ 36 FcepsilonRIIb FcepsilonRIIb PROPN NNP Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 CD23 CD23 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 15 15 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 lipoxygenase lipoxygenase NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ _ 48 receptor receptor NOUN NN Number=Sing _ _ _ _ 49 antagonist antagonist NOUN NN Number=Sing _ _ _ _ 50 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 51 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 -1ra -1ra NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 54 , , PUNCT , _ _ _ _ _ 55 and and CCONJ CC _ _ _ _ _ 56 type type NOUN NN Number=Sing _ _ _ _ 57 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 58 and and CCONJ CC _ _ _ _ _ 59 type type VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 60 II ii NUM CD NumType=Card _ _ _ _ 61 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 62 - - SYM SYM _ _ _ _ SpaceAfter=No 63 1 1 NUM CD NumType=Card _ _ _ _ 64 receptors receptor NOUN NNS Number=Plur _ _ _ _ 65 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 66 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 67 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 68 1R 1r PROPN NNP Number=Sing _ _ _ SpaceAfter=No 69 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 70 . . PUNCT . _ _ _ _ _ # sent_id = 11490 # text = Type I interferons (IFN-alpha and IFN-beta) and type II interferon (IFN-gamma) inhibit induction of these genes by IL-4 and IL-13. 1 Type type NOUN NN Number=Sing _ _ _ _ 2 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 3 interferons interferon NOUN NNS Number=Plur _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 type type VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 15 II ii NUM CD NumType=Card _ _ _ _ 16 interferon interferon NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 inhibit inhibit NOUN NN Number=Sing _ _ _ _ 23 induction induction NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 26 genes gene NOUN NNS Number=Plur _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - SYM SYM _ _ _ _ SpaceAfter=No 30 4 4 NUM CD NumType=Card _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 11491 # text = However, the mechanism by which IFNs mediate this inhibition has not been defined. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 IFNs IFNs PROPN NNPS Number=Plur _ _ _ _ 8 mediate mediate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 10 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 11 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 14 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 11492 # text = In this overview, we discuss the role of the transcription factor, STAT6 (signal transducer and activator of transcription-6) in mediating IL-4- and IL-13-induced gene expression in monocytes. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 overview overview NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 discuss discuss VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 STAT6 STAT6 NUM CD NumType=Card _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 signal signal NOUN NN Number=Sing _ _ _ _ 17 transducer transducer NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 activator activator NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 in in SCONJ IN _ _ _ _ _ 26 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 27 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 gene gene NOUN NN Number=Sing _ _ _ _ 38 expression expression NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 11493 # text = We also discuss our recent findings that type I and type II IFNs suppress IL-4/IL-13-inducible gene expression by inhibiting tyrosine phosphorylation and nuclear translocation of STAT6. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 discuss discuss VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 5 recent recent ADJ JJ Degree=Pos _ _ _ _ 6 findings finding NOUN NNS Number=Plur _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 type type VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 type type VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 II ii NUM CD NumType=Card _ _ _ _ 13 IFNs IFN PROPN NNP Number=Sing _ _ _ _ 14 suppress suppress NOUN NN Number=Sing _ _ _ _ 15 IL-4/IL-13 IL-4/IL-13 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 -inducible -inducible ADJ JJ Degree=Pos _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 by by SCONJ IN _ _ _ _ _ 20 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 21 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 22 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 25 translocation translocation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 STAT6 Stat6 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 11494 # text = The ability of type I and type II IFNs to inhibit IL-4/IL-13-induced STAT6 activity is dose- and time-dependent, and is not unique to monocytes because IFNs induce the same effects in fibroblasts. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ability ability NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 type type NOUN NN Number=Sing _ _ _ _ 5 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 type type VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 II ii NUM CD NumType=Card _ _ _ _ 9 IFNs IFN NOUN NNS Number=Plur _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 12 IL-4/IL-13 IL-4/IL-13 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 -induced -induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 STAT6 STAT6 NUM CD NumType=Card _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 not not PART RB _ _ _ _ _ 27 unique unique ADJ JJ Degree=Pos _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 30 because because SCONJ IN _ _ _ _ _ 31 IFNs IFN PROPN NNPS Number=Plur _ _ _ _ 32 induce induce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 same same ADJ JJ Degree=Pos _ _ _ _ 35 effects effect NOUN NNS Number=Plur _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 11495 # text = Inhibition of STAT6 activity is not evident unless cells are preincubated with IFN for at least 1 h before IL-4 stimulation. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 STAT6 STAT6 NUM CD NumType=Card _ _ _ _ 4 activity activity NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 evident evident ADJ JJ Degree=Pos _ _ _ _ 8 unless unless SCONJ IN _ _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 preincubated preincubate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 IFN Ifn PROPN NNP Number=Sing _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 at at ADV RB _ _ _ _ _ 16 least least ADV RBS Degree=Sup _ _ _ _ 17 1 1 NUM CD NumType=Card _ _ _ _ 18 h h NOUN NN Number=Sing _ _ _ _ 19 before before ADP IN _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 4 4 NUM CD NumType=Card _ _ _ _ 23 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 11496 # text = Furthermore, inhibition can be blocked by actinomycin D, indicating a requirement for de novo transcription. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 4 can can AUX MD VerbForm=Fin _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 actinomycin actinomycin ADP IN _ _ _ _ _ 9 D d PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 requirement requirement NOUN NN Number=Sing _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 de de PROPN NNP Number=Sing _ _ _ _ 16 novo novo PROPN NNP Number=Sing _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 11497 # text = We propose a model in which stimulation of monocytes by IFN activates de novo synthesis of an inhibitory factor, possibly one or more members of the SOCS/ SSI/CIS gene family, capable of suppressing activation of STAT6 by IL-4 and IL-13. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 model model NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 IFN Ifn ADJ JJ Degree=Pos _ _ _ _ 12 activates activate NOUN NNS Number=Plur _ _ _ _ 13 de de VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 novo novo ADJ JJ Degree=Pos _ _ _ _ 15 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 possibly possibly ADV RB _ _ _ _ _ 22 one one NUM CD NumType=Card _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 more more ADJ JJR Degree=Cmp _ _ _ _ 25 members member NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 SOCS SOCS PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 29 / / PUNCT , _ _ _ _ _ 30 SSI SSI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 / / PUNCT , _ _ _ _ SpaceAfter=No 32 CIS CIS DET DT Number=Sing|PronType=Dem _ _ _ _ 33 gene gene ADJ JJ Degree=Pos _ _ _ _ 34 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 capable capable ADJ JJ Degree=Pos _ _ _ _ 37 of of SCONJ IN _ _ _ _ _ 38 suppressing suppresse VERB VBG VerbForm=Ger _ _ _ _ 39 activation activation NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 STAT6 STAT6 PROPN NNP Number=Sing _ _ _ _ 42 by by ADP IN _ _ _ _ _ 43 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT , _ _ _ _ SpaceAfter=No 45 4 4 NUM CD NumType=Card _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 11498 # text = Because STAT6 activation plays an essential role in IL-4/IL-13-induced gene expression, the ability of IFN-beta and IFN-gamma to inhibit STAT6 activity provides an explanation for how IFNs can suppress IL-4/IL-13-inducible gene expression. 1 Because because SCONJ IN _ _ _ _ _ 2 STAT6 STAT6 PROPN NNP Number=Sing _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 essential essential ADJ JJ Degree=Pos _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 IL-4/IL-13 IL-4/IL-13 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 -induced -induced ADJ JJ Degree=Pos _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 ability ability NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 beta beta NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 gamma gamma NOUN NN Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 26 STAT6 STAT6 NUM CD NumType=Card _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ _ 28 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 explanation explanation NOUN NN Number=Sing _ _ _ _ 31 for for SCONJ IN _ _ _ _ _ 32 how how ADV WRB PronType=Int _ _ _ _ 33 IFNs IFN NOUN NNS Number=Plur _ _ _ _ 34 can can AUX MD VerbForm=Fin _ _ _ _ 35 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 36 IL-4/IL-13 IL-4/IL-13 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 -inducible -inducible ADJ JJ Degree=Pos _ _ _ _ 38 gene gene NOUN NN Number=Sing _ _ _ _ 39 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11499 # text = Document 0030012611 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012611 0030012611 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11500 # text = Positive and negative regulation of IL-2 gene expression: role of multiple regulatory sites. 1 Positive positive ADJ JJ Degree=Pos _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 negative negative ADJ JJ Degree=Pos _ _ _ _ 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 : : PUNCT : _ _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 15 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 16 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11501 # text = Interleukin 2 (IL-2) is an important lymphokine required in the process of T cell activation, proliferation, clonal expansion and differentiation. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ _ 2 2 2 NUM CD NumType=Card _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 important important ADJ JJ Degree=Pos _ _ _ _ 11 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 12 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 process process NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cell cell PROPN NNP Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 clonal clonal ADJ JJ Degree=Pos _ _ _ _ 24 expansion expansion NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 11502 # text = The IL-2 gene displays both T cell specific and inducible expression: it is only expressed in CD4+ T cells after antigenic or mitogenic stimulation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 displays display VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 both both DET DT _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 specific specific ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 : : PUNCT : _ _ _ _ _ 15 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 only only ADV RB _ _ _ _ _ 18 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 + + SYM SYM _ _ _ _ _ 22 T t NUM CD NumType=Card _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 after after ADP IN _ _ _ _ _ 25 antigenic antigenic ADJ JJ Degree=Pos _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 28 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 11503 # text = Several cis-acting regulatory sites are required for induction of the IL-2 gene after stimulation. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 -acting -act VERB VBG VerbForm=Ger _ _ _ _ 4 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 5 sites site NOUN NNS Number=Plur _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 after after ADP IN _ _ _ _ _ 17 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 11504 # text = In this study, we have analysed the function of these cis-acting regulatory sites in the context of the native IL-2 enhancer and promoter sequence. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 analysed analyse VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 function function NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 12 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 -acting -act VERB VBG VerbForm=Ger _ _ _ _ 14 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 15 sites site NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 context context NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 native native ADJ JJ Degree=Pos _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ _ 28 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 11505 # text = The results of this study suggest that the NFAT (-276 to -261), the distal octamer (-256 to -248) and the proximal octamer (-75 to -66) sites not only act as enhancers of IL-2 gene transcription in the presence of cellular stimulation, but also have a silencing effect on IL-2 gene expression in resting cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 study study NOUN NN Number=Sing _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 NFAT Nfat NOUN NN Number=Sing _ _ _ _ 10 (-276 (-276 NUM CD NumType=Card _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 261 261 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 distal distal ADJ JJ Degree=Pos _ _ _ _ 18 octamer octamer NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 - - SYM SYM _ _ _ _ SpaceAfter=No 21 256 256 NUM CD NumType=Card _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 - - SYM SYM _ _ _ _ SpaceAfter=No 24 248 248 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 29 octamer octamer NOUN NN Number=Sing _ _ _ _ 30 (- (- PUNCT . _ _ _ _ SpaceAfter=No 31 75 75 NUM CD NumType=Card _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 - - SYM SYM _ _ _ _ SpaceAfter=No 34 66 66 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 sites site NOUN NNS Number=Plur _ _ _ _ 37 not not ADV RB _ _ _ _ _ 38 only only ADV RB _ _ _ _ _ 39 act act VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 40 as as SCONJ IN _ _ _ _ _ 41 enhancers enhancer NOUN NNS Number=Plur _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 2 2 NUM CD NumType=Card _ _ _ _ 46 gene gene NOUN NN Number=Sing _ _ _ _ 47 transcription transcription NOUN NN Number=Sing _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 presence presence NOUN NN Number=Sing _ _ _ _ 51 of of ADP IN _ _ _ _ _ 52 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 53 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 , , PUNCT , _ _ _ _ _ 55 but but CCONJ CC _ _ _ _ _ 56 also also ADV RB _ _ _ _ _ 57 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 58 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 59 silencing silence NOUN NN Number=Sing _ _ _ _ 60 effect effect NOUN NN Number=Sing _ _ _ _ 61 on on ADP IN _ _ _ _ _ 62 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 63 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 64 2 2 NUM CD NumType=Card _ _ _ _ 65 gene gene NOUN NN Number=Sing _ _ _ _ 66 expression expression NOUN NN Number=Sing _ _ _ _ 67 in in ADP IN _ _ _ _ _ 68 resting rest ADJ JJ Degree=Pos _ _ _ _ 69 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 70 . . PUNCT . _ _ _ _ _ # sent_id = 11506 # text = Two other sites display disparate effects on IL-2 gene expression in different T leukemia cell lines: the distal purine box (-291 to -277) and the proximal purine box sites (-145 to -128). 1 Two two NUM CD NumType=Card _ _ _ _ 2 other other ADJ JJ Degree=Pos _ _ _ _ 3 sites site NOUN NNS Number=Plur _ _ _ _ 4 display display VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 disparate disparate ADJ JJ Degree=Pos _ _ _ _ 6 effects effect NOUN NNS Number=Plur _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 different different ADJ JJ Degree=Pos _ _ _ _ 15 T T PROPN NNP Number=Sing _ _ _ _ 16 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 : : PUNCT : _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 distal distal ADJ JJ Degree=Pos _ _ _ _ 22 purine purine NOUN NN Number=Sing _ _ _ _ 23 box box NOUN NN Number=Sing _ _ _ _ 24 (- (- PUNCT . _ _ _ _ SpaceAfter=No 25 291 291 NUM CD NumType=Card _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 - - SYM SYM _ _ _ _ SpaceAfter=No 28 277 277 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 33 purine purine NOUN NN Number=Sing _ _ _ _ 34 box box NOUN NN Number=Sing _ _ _ _ 35 sites site NOUN NNS Number=Plur _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 - - SYM SYM _ _ _ _ SpaceAfter=No 38 145 145 NUM CD NumType=Card _ _ _ _ 39 to to ADP IN _ _ _ _ _ 40 - - SYM SYM _ _ _ _ SpaceAfter=No 41 128 128 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 11507 # text = Finally, the AP-1 (-186 to -176) and the kappa B sites (-206 to -195) respond to different cellular activation in EL4 cells. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 -186 -186 NUM CD NumType=Card _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 - - SYM SYM _ _ _ _ SpaceAfter=No 11 176 176 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 sites site NOUN NNS Number=Plur _ _ _ _ 18 (- (- PUNCT . _ _ _ _ SpaceAfter=No 19 206 206 NUM CD NumType=Card _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 - - SYM SYM _ _ _ _ SpaceAfter=No 22 195 195 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 respond respond NOUN NN Number=Sing _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 different different ADJ JJ Degree=Pos _ _ _ _ 27 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 EL4 EL4 PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 11508 # text = The AP-1 site mediated the response to PMA stimulation while the kappa B site responded to IL-1 stimulation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 site site NOUN NN Number=Sing _ _ _ _ 6 mediated mediate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 response response NOUN NN Number=Sing _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 PMA PMA DET DT Definite=Ind|PronType=Art _ _ _ _ 11 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 12 while while SCONJ IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 kappa kappa PROPN NNP Number=Sing _ _ _ _ 15 B b PROPN NNP Number=Sing _ _ _ _ 16 site site NOUN NN Number=Sing _ _ _ _ 17 responded respond VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 11509 # text = These data suggest that the regulation of IL-2 gene expression is a complex process and multiple cis-acting regulatory sites interact to exert different effects in T cells representative of alternative stages of differentiation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 regulation regulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 complex complex ADJ JJ Degree=Pos _ _ _ _ 16 process process NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 19 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 acting acting VERB VBG VerbForm=Ger _ _ _ _ 22 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 23 sites site NOUN NNS Number=Plur _ _ _ _ 24 interact interact VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 exert exert VERB VB VerbForm=Inf _ _ _ _ 27 different different ADJ JJ Degree=Pos _ _ _ _ 28 effects effect NOUN NNS Number=Plur _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 T t PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 representative representative VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 35 stages stage NOUN NNS Number=Plur _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11510 # text = Document 0030012613 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012613 0030012613 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11511 # text = Nuclear transcription factors that bind to elements of the IL-2 promoter. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 elements element NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 11512 # text = Induction requirements in primary human T cells. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 requirements requirement NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 primary primary ADJ JJ Degree=Pos _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11513 # text = Prior studies have identified several elements that contribute to the activity of the IL-2 promoter in the stimulated T cell line, Jurkat. 1 Prior prior ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 several several ADJ JJ Degree=Pos _ _ _ _ 6 elements element NOUN NNS Number=Plur _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 contribute contribute VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 T T PROPN NNP Number=Sing _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11514 # text = The sites and their corresponding nuclear binding factors include: NF-kappa B, AP-1, AP-3, OCT-1, and NF-AT. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 sites site NOUN NNS Number=Plur _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 5 corresponding correspond NOUN NN Number=Sing _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 binding binding VERB VBG VerbForm=Ger _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 include include VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 10 : : PUNCT : _ _ _ _ _ 11 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 OCT Oct NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 11515 # text = The latter "nuclear factor for activated T cells" likely contributes to the tissue specificity of IL-2 gene expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 latter latter ADJ JJ Degree=Pos _ _ _ _ 3 " " PUNCT `` _ _ _ _ SpaceAfter=No 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 " " PUNCT `` _ _ _ _ _ 11 likely likely ADJ JJ Degree=Pos _ _ _ _ 12 contributes contribute NOUN NNS Number=Plur _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 tissue tissue NOUN NN Number=Sing _ _ _ _ 16 specificity specificity NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 11516 # text = Using electrophoretic mobility shift assays, we have studied these transcription factors in primary T cells from human blood to verify their presence in a physiologic setting and to identify the signals that stimulate factor activity. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 3 mobility mobility NOUN NN Number=Sing _ _ _ _ 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 8 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 studied studie VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 primary primary ADJ JJ Degree=Pos _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 blood blood NOUN NN Number=Sing _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 verify verify VERB VB VerbForm=Inf _ _ _ _ 22 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 23 presence presence NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 physiologic physiologic NOUN NN Number=Sing _ _ _ _ 27 setting set NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 to to PART TO _ _ _ _ _ 30 identify identify VERB VB VerbForm=Inf _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 signals signal NOUN NNS Number=Plur _ _ _ _ 33 that that PRON WDT PronType=Rel _ _ _ _ 34 stimulate stimulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ _ 36 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 11517 # text = All factors are induced in the nuclei of T cells upon activation with mitogens but not with exogenous IL-2 growth factor. 1 All all DET DT _ _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 nuclei nuclei NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 upon upon ADP IN _ _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 mitogens mitogen NOUN NNS Number=Plur _ _ _ _ 15 but but CCONJ CC _ _ _ _ _ 16 not not ADV RB _ _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 19 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ _ 22 growth growth NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 11518 # text = However, the signaling requirements and sensitivity to protein synthesis inhibitors differ considerably. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 5 requirements requirement NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 sensitivity sensitivity NOUN NN Number=Sing _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 protein protein VERB VB VerbForm=Inf _ _ _ _ 10 synthesis synthesis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 11 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 12 differ differ VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 considerably considerably ADV RB _ _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 11519 # text = Only the activities for NF-AT and AP-1 sites require two signals for optimal induction, i.e., PMA plus either lectin or antibody to the CD3 or CD28 surface molecules. 1 Only only ADV RB _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 activities activity NOUN NNS Number=Plur _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 AT AT PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 sites site NOUN NNS Number=Plur _ _ _ _ 13 require require VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 two two NUM CD NumType=Card _ _ _ _ 15 signals signal NOUN NNS Number=Plur _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 18 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 i.e. i.e. X FW _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 PMA PMA PROPN NNP Number=Sing _ _ _ _ 23 plus plus CCONJ CC _ _ _ _ _ 24 either either CCONJ CC _ _ _ _ _ 25 lectin lectin NOUN NN Number=Sing _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 antibody antibody PRON NN Number=Sing _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 31 or or CCONJ CC _ _ _ _ _ 32 CD28 CD28 NOUN NN Number=Sing _ _ _ _ 33 surface surface NOUN NN Number=Sing _ _ _ _ 34 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 11520 # text = Other factors are induced by lectin, antibody, and/or PMA alone. 1 Other other ADJ JJ Degree=Pos _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 lectin lectin NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 antibody antibody PRON NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 or or CCONJ CC _ _ _ _ _ 13 PMA PMA PROPN NNP Number=Sing _ _ _ _ 14 alone alone ADV RB _ _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 11521 # text = After appropriate stimulation, both NF-AT and AP-1 are peculiarly sensitive to the protein synthesis inhibitor anisomycin. 1 After after ADP IN _ _ _ _ _ 2 appropriate appropriate ADJ JJ Degree=Pos _ _ _ _ 3 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 both both CCONJ CC _ _ _ _ _ 6 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 AT AT NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 peculiarly peculiarly ADV RB _ _ _ _ _ 15 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 20 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 21 anisomycin anisomycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 11522 # text = Our data correlate the activity of NF-AT and AP-1 in gel shift assays with the two signals requirements for IL-2 gene expression. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 correlate correlate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 AT AT NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 gel gel NOUN NN Number=Sing _ _ _ _ 16 shift shift NOUN NN Number=Sing _ _ _ _ 17 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 two two NUM CD NumType=Card _ _ _ _ 21 signals signal NOUN NNS Number=Plur _ _ _ _ 22 requirements requirement NOUN NNS Number=Plur _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11523 # text = Document 0030012617 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012617 0030012617 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11524 # text = Cytokine-modulating activity of tepoxalin, a new potential antirheumatic. 1 Cytokine Cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 4 activity activity NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 tepoxalin tepoxalin NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 new new ADJ JJ Degree=Pos _ _ _ _ 10 potential potential NOUN NN Number=Sing _ _ _ _ 11 antirheumatic antirheumatic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11525 # text = Tepoxalin is a new dual cyclooxygenase/5-lipoxygenase anti-inflammatory compound currently under clinical investigation. 1 Tepoxalin Tepoxalin PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 new new ADJ JJ Degree=Pos _ _ _ _ 5 dual dual ADJ JJ Degree=Pos _ _ _ _ 6 cyclooxygenase cyclooxygenase NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 -lipoxygenase -lipoxygenase NOUN NN Number=Sing _ _ _ _ 10 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 11 compound compound NOUN NN Number=Sing _ _ _ _ 12 currently currently ADV RB _ _ _ _ _ 13 under under ADP IN _ _ _ _ _ 14 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 15 investigation investigation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 11526 # text = It has been shown to possess anti-inflammatory activity in a variety of animal models and more recently to inhibit IL-2 induced signal transduction. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 possess possess VERB VB VerbForm=Inf _ _ _ _ 7 anti-inflammatory anti-inflammatory ADJ JJ Degree=Pos _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 variety variety NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 animal animal NOUN NN Number=Sing _ _ _ _ 14 models model NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 more more ADV RBR _ _ _ _ _ 17 recently recently ADV RB _ _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 20 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 signal signal ADJ JJ Degree=Pos _ _ _ _ 25 transduction transduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11527 # text = The current study was conducted to evaluate the cytokine modulating activity of tepoxalin and the role of iron in these effects. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 current current ADJ JJ Degree=Pos _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 conducted conduct VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 evaluate evaluate VERB VB VerbForm=Inf _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 10 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 tepoxalin tepoxalin NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 role role NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 iron iron NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 21 effects effect NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 11528 # text = In human peripheral blood mononuclear cells (PBMC) stimulated with OKT3/PMA, tepoxalin inhibited lymphocyte proliferation with an IC50 of 6 microM. 1 In in ADP IN _ _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 4 blood blood NOUN NN Number=Sing _ _ _ _ 5 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 PBMC PBMC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 stimulated stimulate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 OKT3 OKT3 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 / / PUNCT , _ _ _ _ SpaceAfter=No 14 PMA Pma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 tepoxalin tepoxalin ADP IN _ _ _ _ _ 17 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 19 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 IC50 IC50 PROPN NNP Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 6 6 NUM CD NumType=Card _ _ _ _ 25 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11529 # text = Additionally, it inhibited the production of LTB4 (IC50 = 0.5 microM) and the cytokines IL-2, IL-6 and TNF alpha (IC50 = 10-12 microM). 1 Additionally additionally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 4 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 production production NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 LTB4 LTB4 PROPN NNP Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 IC50 IC50 NUM CD NumType=Card _ _ _ _ 11 = = SYM SYM _ _ _ _ _ 12 0.5 0.5 NUM CD NumType=Card _ _ _ _ 13 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 cytokines cytokine PROPN NNPS Number=Plur _ _ _ _ 18 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 6 6 NUM CD NumType=Card _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 TNF TNF NOUN NN Number=Sing _ _ _ _ 27 alpha alpha NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 IC50 IC50 NUM CD NumType=Card _ _ _ _ 30 = = SYM SYM _ _ _ _ _ 31 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 -12 -12 NUM CD NumType=Card _ _ _ _ 33 microM microm NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 11530 # text = Cytotoxicity was not demonstrated at these concentrations. 1 Cytotoxicity Cytotoxicity NOUN NN Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 not not PART RB _ _ _ _ _ 4 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 at at ADP IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 concentrations concentration NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 11531 # text = Add-back experiments with either cytokines (IL-2 or IL-6), LTB4 or conditioned media failed to restore the proliferative response in the presence of tepoxalin. 1 Add add VERB VB Mood=Imp|VerbForm=Fin _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 back back ADP RP _ _ _ _ _ 4 experiments experiment NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 either either DET DT _ _ _ _ _ 7 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 LTB4 LTB4 NUM CD NumType=Card _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 conditioned condition VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 media media NOUN NN Number=Sing _ _ _ _ 22 failed fail VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 restore restore VERB VB VerbForm=Inf _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 27 response response NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 presence presence NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 tepoxalin tepoxalin NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 11532 # text = However, the concurrent addition of iron (in the form of ferrous or ferric chloride and other iron salts) reversed the inhibition of proliferation caused by tepoxalin. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 concurrent concurrent ADJ JJ Degree=Pos _ _ _ _ 5 addition addition NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 iron iron ADJ JJ Degree=Pos _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 form form NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 ferrous ferrous ADJ JJ Degree=Pos _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 ferric ferric ADJ JJ Degree=Pos _ _ _ _ 16 chloride chloride NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 other other ADJ JJ Degree=Pos _ _ _ _ 19 iron iron ADJ JJ Degree=Pos _ _ _ _ 20 salts salt NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 reversed reverse VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 27 caused cause VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 tepoxalin tepoxalin NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 11533 # text = Tepoxalin also inhibits the activation of NF kappa B, a transcription factor which acts on several cytokine genes. 1 Tepoxalin Tepoxalin PROPN NNP Number=Sing _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ _ 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 several several ADJ JJ Degree=Pos _ _ _ _ 18 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 19 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 11534 # text = Tepoxalin's effect on NF kappa B is also reversed by the addition of iron salts. 1 Tepoxalin Tepoxalin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 's 's PART POS _ _ _ _ _ 3 effect effect NOUN NN Number=Sing _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ _ 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B B PROPN NNP Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 also also ADV RB _ _ _ _ _ 10 reversed reverse VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 addition addition NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 iron iron ADJ JJ Degree=Pos _ _ _ _ 16 salts salt NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 11535 # text = These data suggest that the action of tepoxalin to inhibit proliferation in PBMC may be at least in part due to its ability to reduce the amount of available iron resulting in decreased activation of NF kappa B and subsequent inhibition of cytokine production. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 action action NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 tepoxalin tepoxalin NOUN NN Number=Sing _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 11 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 PBMC PBMC PROPN NNP Number=Sing _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 at at ADV RB _ _ _ _ _ 17 least least ADV RBS Degree=Sup _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 part part NOUN NN Number=Sing _ _ _ _ 20 due due ADP IN _ _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 23 ability ability NOUN NN Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 reduce reduce VERB VB VerbForm=Inf _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 amount amount NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 available available ADJ JJ Degree=Pos _ _ _ _ 30 iron iron NOUN NN Number=Sing _ _ _ _ 31 resulting result VERB VBG VerbForm=Ger _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 activation activation NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 NF NF PROPN NNP Number=Sing _ _ _ _ 37 kappa kappa PROPN NNP Number=Sing _ _ _ _ 38 B B PROPN NNP Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 41 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 44 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11536 # text = Document 0030012618 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012618 0030012618 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11537 # text = Role of the X2 box in activated transcription from the DRA promoter in B cells. 1 Role role NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 X2 x2 NOUN NN Number=Sing _ _ _ _ 5 box box NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 DRA DRA PROPN NNP Number=Sing _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 B b ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11538 # text = We investigated the function of the evolutionary conserved X2 box in the promoter of the HLA-DRA gene from the human major histocompatibility complex (MHC) in resting and activated B cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 function function NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 evolutionary evolutionary NOUN NN Number=Sing _ _ _ _ 8 conserved conserve VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 X2 X2 NUM CD NumType=Card _ _ _ _ 10 box box NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 DRA DRA PROPN NNP Number=Sing _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 major major ADJ JJ Degree=Pos _ _ _ _ 24 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 25 complex complex NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 MHC MHC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 resting resting NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 33 B b ADJ JJ Degree=Pos _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 11539 # text = NF-X2, which contains members of the AP-1/ATF/CREB families of transcription factors, interacts with the X2 box (5'-TGCGTCA-3') from positions -97 to -91 in the DRA promoter. 1 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 X2 x2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 which which PRON WDT PronType=Rel _ _ _ _ 6 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 members member NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1/ATF 1/atf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 14 CREB Creb NOUN NN Number=Sing _ _ _ _ 15 families familie NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 interacts interacts NOUN NNS Number=Plur _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 X2 x2 NOUN NN Number=Sing _ _ _ _ 24 box box NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 5'-TGCGTCA 5'-TGCGTCa NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 from from ADP IN _ _ _ _ _ 32 positions position NOUN NNS Number=Plur _ _ _ _ 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 97 97 NUM CD NumType=Card _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 - - SYM SYM _ _ _ _ SpaceAfter=No 37 91 91 NUM CD NumType=Card _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 DRA DRA PROPN NNP Number=Sing _ _ _ _ 41 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 11540 # text = In resting Raji cells, little to no binding to the X2 box was observed. 1 In in ADP IN _ _ _ _ _ 2 resting rest ADJ JJ Degree=Pos _ _ _ _ 3 Raji Raji PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 little little ADJ JJ Degree=Pos _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 no no DET DT _ _ _ _ _ 9 binding binding NOUN NN Number=Sing _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 X2 x2 NOUN NN Number=Sing _ _ _ _ 13 box box NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 observed observe ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 11541 # text = In sharp contrast, in B cells treated with the phorbol ester 12-O-tetradecanoylphorbol-13-acetate (TPA), strong interactions between the X2 box and NF-X2 containing c-Fos were observed. 1 In in ADP IN _ _ _ _ _ 2 sharp sharp ADJ JJ Degree=Pos _ _ _ _ 3 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 B b ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 12 ester ester NOUN NN Number=Sing _ _ _ _ 13 12-O-tetradecanoylphorbol 12-O-tetradecanoylphorbol NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 -acetate -acetate NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 strong strong ADJ JJ Degree=Pos _ _ _ _ 21 interactions interaction NOUN NNS Number=Plur _ _ _ _ 22 between between ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 X2 x2 NOUN NN Number=Sing _ _ _ _ 25 box box NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 X2 x2 NOUN NN Number=Sing _ _ _ _ 30 containing containing VERB VBG VerbForm=Ger _ _ _ _ 31 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 Fos Fo NOUN NNS Number=Plur _ _ _ _ 34 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 11542 # text = As determined by transient expression and RNA analyses, the activation of protein kinase C (PKC) also increased rates of transcription from the wild-type DRA promoter but not from a DRA promoter bearing clustered point mutations in the X2 box. 1 As as SCONJ IN _ _ _ _ _ 2 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 transient transient ADJ JJ Degree=Pos _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 RNA RNa NOUN NN Number=Sing _ _ _ _ 8 analyses analysis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 kinase kinase NOUN NN Number=Sing _ _ _ _ 15 C C PROPN NNP Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 also also ADV RB _ _ _ _ _ 20 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 rates rate NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 from from ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 type type NOUN NN Number=Sing _ _ _ _ 29 DRA DRa NOUN NN Number=Sing _ _ _ _ 30 promoter promoter NOUN NN Number=Sing _ _ _ _ 31 but but CCONJ CC _ _ _ _ _ 32 not not ADV RB _ _ _ _ _ 33 from from ADP IN _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 DRA DRA PROPN NNP Number=Sing _ _ _ _ 36 promoter promoter NOUN NN Number=Sing _ _ _ _ 37 bearing bear VERB VBG VerbForm=Ger _ _ _ _ 38 clustered clustered ADJ JJ Degree=Pos _ _ _ _ 39 point point NOUN NN Number=Sing _ _ _ _ 40 mutations mutation NOUN NNS Number=Plur _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 X2 x2 NOUN NN Number=Sing _ _ _ _ 44 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 11543 # text = Since the co-expression with a dominant negative c-Fos abolished the responsiveness to TPA, we conclude that activated transcription of the DRA gene depends on interactions between the X2 box and NF-X2, which contains c-Fos. 1 Since since SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 co-expression co-expression NOUN NN Number=Sing _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 7 negative negative NOUN NN Number=Sing _ _ _ _ 8 c- c- PUNCT , _ _ _ _ SpaceAfter=No 9 Fos Fos PROPN NNP Number=Sing _ _ _ _ 10 abolished abolish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 17 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 activated activated VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 DRA DRA PROPN NNP Number=Sing _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 depends depend VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 interactions interaction NOUN NNS Number=Plur _ _ _ _ 28 between between ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 X2 x2 NOUN NN Number=Sing _ _ _ _ 31 box box NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 X2 x2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 which which PRON WDT PronType=Rel _ _ _ _ 38 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 c- c- SYM NFP _ _ _ _ SpaceAfter=No 40 Fos. Fos. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11544 # text = Document 0030012624 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012624 0030012624 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11545 # text = Expression of transcription factor genes after influenza A virus infection. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 genes gene NOUN NNS Number=Plur _ _ _ _ 6 after after ADP IN _ _ _ _ _ 7 influenza influenza NOUN NN Number=Sing _ _ _ _ 8 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 virus virus NOUN NN Number=Sing _ _ _ _ 10 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11546 # text = Infection of human monocytes with influenza 1 Infection Infection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 influenza influenza NOUN NN Number=Sing _ _ _ _ # sent_id = 11547 # text = A virus induces a broad range of proinflammatory cytokines and mononuclear cell attracting chemokines before the infected cells undergo apoptosis. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 virus virus NOUN NN Number=Sing _ _ _ _ 3 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 broad broad ADJ JJ Degree=Pos _ _ _ _ 6 range range NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 9 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 mononuclear mononuclear NOUN NN Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 attracting attract VERB VBG VerbForm=Ger _ _ _ _ 14 chemokines chemokine NOUN NNS Number=Plur _ _ _ _ 15 before before ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 undergo undergo ADJ JJ Degree=Pos _ _ _ _ 20 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 11548 # text = The underlying mechanisms by which the corresponding genes are transcriptionally initiated after virus infection are still poorly understood. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 underlying underlying ADJ JJ Degree=Pos _ _ _ _ 3 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 which which PRON WDT PronType=Rel _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 corresponding corresponding NOUN NN Number=Sing _ _ _ _ 8 genes gene NOUN NNS Number=Plur _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 transcriptionally transcriptionally ADV RB _ _ _ _ _ 11 initiated initiate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 after after ADP IN _ _ _ _ _ 13 virus virus NOUN NN Number=Sing _ _ _ _ 14 infection infection NOUN NN Number=Sing _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 still still ADV RB _ _ _ _ _ 17 poorly poorly ADJ JJ Degree=Pos _ _ _ _ 18 understood understand NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 11549 # text = Activation of NF-kappa B seems to play an important role in the regulation of many proinflammatory cytokine genes, but cannot be the only mechanism, since several cytokine genes lack respective binding sites in their promoter regions. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B b PROPN NNP Number=Sing _ _ _ _ 7 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 play play VERB VB VerbForm=Inf _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 important important ADJ JJ Degree=Pos _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 regulation regulation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 many many ADJ JJ Degree=Pos _ _ _ _ 18 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 19 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 20 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 24 not not PART RB _ _ _ _ _ 25 be be AUX VB VerbForm=Inf _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 only only ADJ JJ Degree=Pos _ _ _ _ 28 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 since since SCONJ IN _ _ _ _ _ 31 several several ADJ JJ Degree=Pos _ _ _ _ 32 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 33 genes gene NOUN NNS Number=Plur _ _ _ _ 34 lack lack NOUN NN Number=Sing _ _ _ _ 35 respective respective ADJ JJ Degree=Pos _ _ _ _ 36 binding binding VERB VBG VerbForm=Ger _ _ _ _ 37 sites site NOUN NNS Number=Plur _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 40 promoter promoter NOUN NN Number=Sing _ _ _ _ 41 regions region NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 11550 # text = Therefore, we additionally investigated other transcription factors of possible importance such as CREB, CTF, OTF-1, and OTF-2. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 additionally additionally ADV RB _ _ _ _ _ 5 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 other other ADJ JJ Degree=Pos _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 possible possible ADJ JJ Degree=Pos _ _ _ _ 11 importance importance NOUN NN Number=Sing _ _ _ _ 12 such such ADJ JJ Degree=Pos _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 CTF CTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 OTF OTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 OTF OTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 11551 # text = To explore long-term regulatory mechanisms, we investigated the induction of transcription factors on the gene expression level which may be important to substitute for metabolized transcription factor proteins after their activation. 1 To to PART TO _ _ _ _ _ 2 explore explore VERB VB VerbForm=Inf _ _ _ _ 3 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 term term NOUN NN Number=Sing _ _ _ _ 6 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 7 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 10 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 level level NOUN NN Number=Sing _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 may may AUX MD VerbForm=Fin _ _ _ _ 23 be be AUX VB VerbForm=Inf _ _ _ _ 24 important important ADJ JJ Degree=Pos _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 substitute substitute VERB VB VerbForm=Inf _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 metabolized metabolize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ _ 31 proteins protein NOUN NNS Number=Plur _ _ _ _ 32 after after ADP IN _ _ _ _ _ 33 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 34 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 11552 # text = We identified a cell-type-specific differential response: CREB, CTF, OTF-1, OFT-2, and NF-kappa B genes were strongly induced 1 to 4 hours after influenza 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 differential differential NOUN NN Number=Sing _ _ _ _ 10 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 : : PUNCT : _ _ _ _ _ 12 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 CTF CTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 OTF OTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 OFT OFT NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ _ 29 genes gene NOUN NNS Number=Plur _ _ _ _ 30 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 strongly strongly ADV RB _ _ _ _ _ 32 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 1 1 NUM CD NumType=Card _ _ _ _ 34 to to ADP IN _ _ _ _ _ 35 4 4 NUM CD NumType=Card _ _ _ _ 36 hours hour NOUN NNS Number=Plur _ _ _ _ 37 after after ADP IN _ _ _ _ _ 38 influenza influenza NOUN NN Number=Sing _ _ _ _ # sent_id = 11553 # text = A virus infection in the monocytic cell line Mono Mac 6, while in freshly prepared human monocytes no significant changes were detected. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 virus virus NOUN NN Number=Sing _ _ _ _ 3 infection infection NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 line line NOUN NN Number=Sing _ _ _ _ 9 Mono Mono PROPN NNP Number=Sing _ _ _ _ 10 Mac Mac PROPN NNP Number=Sing _ _ _ _ 11 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 while while SCONJ IN _ _ _ _ _ 14 in in SCONJ IN _ _ _ _ _ 15 freshly freshly ADV RB _ _ _ _ _ 16 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 19 no no DET DT _ _ _ _ _ 20 significant significant ADJ JJ Degree=Pos _ _ _ _ 21 changes change NOUN NNS Number=Plur _ _ _ _ 22 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 11554 # text = In infected monocytes, which die by apoptosis, the expression of CREB, CTF, and OTF-2 was rather suppressed 8 hours after infection. 1 In in ADP IN _ _ _ _ _ 2 infected infect ADJ JJ Degree=Pos _ _ _ _ 3 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 which which PRON WDT PronType=Rel _ _ _ _ 6 die die VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 apoptosis apoptosis PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 CREB CREB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 CTF CTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 OTF OTF NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 rather rather ADV RB _ _ _ _ _ 23 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 8 8 NUM CD NumType=Card _ _ _ _ 25 hours hour NOUN NNS Number=Plur _ _ _ _ 26 after after ADP IN _ _ _ _ _ 27 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 11555 # text = In conclusion, the long-term regulation of transcription factor gene expression in non-proliferating cells seems to be of minor importance after influenza infection since in apoptosisprone cells an immediate availability of transcription factor proteins is required. 1 In in ADP IN _ _ _ _ _ 2 conclusion conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 term term NOUN NN Number=Sing _ _ _ _ 8 regulation regulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 non-proliferating non-proliferat ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 minor minor ADJ JJ Degree=Pos _ _ _ _ 22 importance importance NOUN NN Number=Sing _ _ _ _ 23 after after ADP IN _ _ _ _ _ 24 influenza influenza ADJ JJ Degree=Pos _ _ _ _ 25 infection infection NOUN NN Number=Sing _ _ _ _ 26 since since SCONJ IN _ _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 apoptosisprone apoptosisprone ADJ JJ Degree=Pos _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 32 availability availability NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ _ 36 proteins protein NOUN NNS Number=Plur _ _ _ _ 37 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11556 # text = Document 0030012626 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012626 0030012626 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11557 # text = Cell-specific expression of helix-loop-helix transcription factors encoded by the E2A gene. 1 Cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 specific specific ADJ JJ Degree=Pos _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 helix helix NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 -loop -loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 helix helix NOUN NN Number=Sing _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ _ 12 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 E2A E2a PROPN NNP Number=Sing _ _ _ _ 16 gene gene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11558 # text = The E2A gene encodes transcription factors of the helix-loop-helix family that are implicated in cell-specific gene expression as part of dimeric complexes that interact with E box enhancer elements. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 E2A E2A PROPN NNP Number=Sing _ _ _ _ 3 gene gene PROPN NNP Number=Sing _ _ _ _ 4 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factors factor NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 helix-loop helix-loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 helix helix NOUN NN Number=Sing _ _ _ _ 12 family family NOUN NN Number=Sing _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 implicated implicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 as as ADP IN _ _ _ _ _ 23 part part NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 dimeric dimeric ADJ JJ Degree=Pos _ _ _ _ 26 complexes complex NOUN NNS Number=Plur _ _ _ _ 27 that that PRON WDT PronType=Rel _ _ _ _ 28 interact interact VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 E e NOUN NN Number=Sing _ _ _ _ 31 box box NOUN NN Number=Sing _ _ _ _ 32 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 33 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 11559 # text = It has previously been shown that transcripts of the E2A gene can be detected in a wide range of cell types. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 E2A E2a PROPN NNP Number=Sing _ _ _ _ 11 gene gene PROPN NNP Number=Sing _ _ _ _ 12 can can AUX MD VerbForm=Fin _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 wide wide ADJ JJ Degree=Pos _ _ _ _ 18 range range NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 11560 # text = We have now examined expression of the mouse E2A gene at the protein level using polyclonal antisera directed against distinct portions of the E2A protein to probe blots of cellular extracts. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 now now ADV RB _ _ _ _ _ 4 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 mouse mouse NOUN NN Number=Sing _ _ _ _ 9 E2 E2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 at at ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 level level NOUN NN Number=Sing _ _ _ _ 16 using use VERB VBG VerbForm=Ger _ _ _ _ 17 polyclonal polyclonal ADJ JJ Degree=Pos _ _ _ _ 18 antisera antisera NOUN NN Number=Sing _ _ _ _ 19 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 against against ADP IN _ _ _ _ _ 21 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 22 portions portion NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 E2A E2A PROPN NNP Number=Sing _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 probe probe VERB VB VerbForm=Inf _ _ _ _ 29 blots blot NOUN NNS Number=Plur _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 32 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 11561 # text = A 73 kDa protein was identified by this analysis: this protein is highly enriched in cell lines of B lymphoid origin as compared to pancreatic beta-cells and fibroblast cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 73 73 NUM CD NumType=Card _ _ _ _ 3 kDa kDa NOUN NN Number=Sing _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 9 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 : : PUNCT : _ _ _ _ _ 11 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 highly highly ADV RB _ _ _ _ _ 15 enriched enrich VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 lines line NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 B b ADJ JJ Degree=Pos _ _ _ _ 21 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 22 origin origin NOUN NN Number=Sing _ _ _ _ 23 as as SCONJ IN _ _ _ _ _ 24 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 pancreatic pancreatic ADJ JJ Degree=Pos _ _ _ _ 27 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 fibroblast fibroblast ADJ JJ Degree=Pos _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 11562 # text = The detection of this protein selectively in extracts of lymphoid cells correlates with the presence of the E box-binding activity LEF1/BCF1 in these cells; this binding activity was previously shown to be efficiently recognized by antiserum directed against E2A gene products. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 detection detection NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 selectively selectively ADV RB _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 extracts extract NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 presence presence NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 E e NOUN NN Number=Sing _ _ _ _ 19 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 binding bind VERB VBG VerbForm=Ger _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 LEF1/BCF1 Lef1/bcf1 NUM CD NumType=Card _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 ; ; PUNCT , _ _ _ _ _ 28 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 29 binding binding VERB VBG VerbForm=Ger _ _ _ _ 30 activity activity NOUN NN Number=Sing _ _ _ _ 31 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 32 previously previously ADV RB _ _ _ _ _ 33 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 34 to to PART TO _ _ _ _ _ 35 be be AUX VB VerbForm=Inf _ _ _ _ 36 efficiently efficiently ADV RB _ _ _ _ _ 37 recognized recognize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 by by ADP IN _ _ _ _ _ 39 antiserum antiserum NOUN NN Number=Sing _ _ _ _ 40 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 against against ADP IN _ _ _ _ _ 42 E2A E2a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 gene gene ADJ JJ Degree=Pos _ _ _ _ 44 products product NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 11563 # text = Transfection of cells with full length E2A cDNA leads to appearance of protein co-migrating with the 73 kDa protein on SDS gel electrophoresis and co-migrating with LEF1/BCF1 on mobility shift analysis. 1 Transfection Transfection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 full full ADJ JJ Degree=Pos _ _ _ _ 6 length length NOUN NN Number=Sing _ _ _ _ 7 E2 E2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 10 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 appearance appearance NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 co-migrating co-migrat NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 73 73 NUM CD NumType=Card _ _ _ _ 19 kDa kDa NOUN NN Number=Sing _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 on on ADP IN _ _ _ _ _ 22 SDS SDS NOUN NN Number=Sing _ _ _ _ 23 gel gel NOUN NN Number=Sing _ _ _ _ 24 electrophoresis electrophoresis NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 co-migrating co-migrat VERB VBG VerbForm=Ger _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 LEF1/BCF1 LEF1/BCF1 PROPN NNP Number=Sing _ _ _ _ 29 on on ADP IN _ _ _ _ _ 30 mobility mobility NOUN NN Number=Sing _ _ _ _ 31 shift shift NOUN NN Number=Sing _ _ _ _ 32 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 11564 # text = Our results are consistent with the view that the DNA-binding activity LEF1/BCF1 is a homodimer of E2A proteins; the selective appearance of this putative cell-specific transcription factor in B lymphoid cells seems to be attributable, at least in part, to the elevated E2A protein concentrations in these cells. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 view view NOUN NN Number=Sing _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 LEF1/ Lef1/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 BCF1 Bcf1 NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 homodimer homodimer NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 E2A E2a PROPN NNP Number=Sing _ _ _ _ 21 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 ; ; PUNCT , _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 selective selective ADJ JJ Degree=Pos _ _ _ _ 25 appearance appearance NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 putative putative ADJ JJ Degree=Pos _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 specific specific ADJ JJ Degree=Pos _ _ _ _ 32 transcription transcription NOUN NN Number=Sing _ _ _ _ 33 factor factor NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 B b ADJ JJ Degree=Pos _ _ _ _ 36 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ _ 38 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 to to PART TO _ _ _ _ _ 40 be be AUX VB VerbForm=Inf _ _ _ _ 41 attributable attributable ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 at at ADV RB _ _ _ _ _ 44 least least ADV RBS Degree=Sup _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 part part ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 to to ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 51 E2A E2a NOUN NN Number=Sing _ _ _ _ 52 protein protein NOUN NN Number=Sing _ _ _ _ 53 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 54 in in ADP IN _ _ _ _ _ 55 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 56 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11565 # text = Document 0030012630 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012630 0030012630 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11566 # text = Inducible nitric oxide: an autoregulatory feedback inhibitor of vascular inflammation. 1 Inducible Inducible ADJ JJ Degree=Pos _ _ _ _ 2 nitric nitric ADJ JJ Degree=Pos _ _ _ _ 3 oxide oxide NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 autoregulatory autoregulatory ADJ JJ Degree=Pos _ _ _ _ 7 feedback feedback NOUN NN Number=Sing _ _ _ _ 8 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 11 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11567 # text = Inducible nitric oxide (iNO) is produced at sites of vascular inflammation by resident and nonresident vascular wall cells, but its role in the inflammatory process is not known. 1 Inducible Inducible ADJ JJ Degree=Pos _ _ _ _ 2 nitric nitric ADJ JJ Degree=Pos _ _ _ _ 3 oxide oxide NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 iNO iNO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 produced produce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 at at ADP IN _ _ _ _ _ 10 sites site NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 13 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 resident resident NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 nonresident nonresident ADJ JJ Degree=Pos _ _ _ _ 18 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 19 wall wall NOUN NN Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 24 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 role role NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 29 process process NOUN NN Number=Sing _ _ _ _ 30 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 not not PART RB _ _ _ _ _ 32 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 11568 # text = In this study, we show that a novel function of iNO is to terminate inflammatory processes. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 novel novel NOUN NN Number=Sing _ _ _ _ 10 function function NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 iNO iNO NOUN NN Number=Sing _ _ _ _ 13 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 terminate terminate VERB VB VerbForm=Inf _ _ _ _ 16 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 17 processes process NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 11569 # text = We find that iNO produced by murine macrophage-like cells, RAW264.7, can inhibit cytokine-induced endothelial cell activation in a separated and mixed endothelial-RAW264.7 coculture system. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 find find VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 iNO ino PROPN NNP Number=Sing _ _ _ _ 5 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 murine murine NOUN NN Number=Sing _ _ _ _ 8 macrophage macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 like like ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 RAW RAW PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 264.7 264.7 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 can can AUX MD VerbForm=Fin _ _ _ _ 17 inhibit inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 separated separate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 mixed mix VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 endothelial endothelial ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 RAW264.7 RAW264.7 NOUN NN Number=Sing _ _ _ _ 32 coculture coculture NOUN NN Number=Sing _ _ _ _ 33 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 11570 # text = Both iNO production and endothelial VCAM-1 expression were induced simultaneously with bacterial LPS and murine-specific IFN-gamma. 1 Both both DET DT _ _ _ _ _ 2 iNO ino ADJ JJ Degree=Pos _ _ _ _ 3 production production NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 6 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 simultaneously simultaneously ADV RB _ _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 15 LPS Lps NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 murine murine NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 11571 # text = Inhibition of iNO synthase (iNOS) activity with N omega-monomethyl-L-arginine in endothelial-RAW264.7 cocultures, stimulated with murine-specific IFN-gamma and LPS, decreased iNO production by 86%, augmented VCAM-1 and iNOS expression in endothelial and RAW264.7 cells, respectively, and increased monocyte adhesion to the endothelial cell surface. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 iNO ino DET DT _ _ _ _ _ 4 synthase synthase NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 iNOS iNOS NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 N N PROPN NNP Number=Sing _ _ _ _ 11 omega omega X AFX _ _ _ _ SpaceAfter=No 12 -monomethyl -monomethyl ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 L l ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 arginine arginine NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 endothelial endothelial ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 -RAW264.7 -RAW264.7 NUM CD NumType=Card _ _ _ _ 20 cocultures coculture NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 murine murine NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 specific specific ADJ JJ Degree=Pos _ _ _ _ 27 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 gamma gamma NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 LPS Lp NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 iNO ino DET DT _ _ _ _ _ 35 production production NOUN NN Number=Sing _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 86 86 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 % % SYM NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 augmented augment VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 VCAM VCAM NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 1 1 NUM CD NumType=Card _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 iNOS inos ADJ JJ Degree=Pos _ _ _ _ 46 expression expression NOUN NN Number=Sing _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 RAW raw PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 264.7 264.7 NUM CD NumType=Card _ _ _ _ 52 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 , , PUNCT , _ _ _ _ _ 54 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 55 , , PUNCT , _ _ _ _ _ 56 and and CCONJ CC _ _ _ _ _ 57 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 58 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 59 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 60 to to ADP IN _ _ _ _ _ 61 the the DET DT Definite=Def|PronType=Art _ _ _ _ 62 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 63 cell cell NOUN NN Number=Sing _ _ _ _ 64 surface surface NOUN NN Number=Sing _ _ _ SpaceAfter=No 65 . . PUNCT . _ _ _ _ _ # sent_id = 11572 # text = Transient transfection studies using various VCAM-1 promoter constructs demonstrated that inhibitory effects of iNO on VCAM-1 gene transcription were mediated, in part, by inhibitory effects of iNO on kappa B cis-acting elements. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 transfection transfection NOUN NN Number=Sing _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 using use VERB VBG VerbForm=Ger _ _ _ _ 5 various various ADJ JJ Degree=Pos _ _ _ _ 6 VCAM VCAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 constructs construct NOUN NNS Number=Plur _ _ _ _ 11 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 that that SCONJ IN _ _ _ _ _ 13 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 14 effects effect NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 iNO iNO PROPN NNP Number=Sing _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 VCAM VCAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 part part ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 31 effects effect NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 iNO iNO NOUN NN Number=Sing _ _ _ _ 34 on on ADP IN _ _ _ _ _ 35 kappa kappa NOUN NN Number=Sing _ _ _ _ 36 B b NOUN NN Number=Sing _ _ _ _ 37 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT , _ _ _ _ SpaceAfter=No 39 acting acte VERB VBG VerbForm=Ger _ _ _ _ 40 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 11573 # text = Immunofluorescence studies using an Ab to the RelA (p65) subunit of nuclear factor-kappa B revealed that iNO inhibited the activation of nuclear factor-kappa B. 1 Immunofluorescence Immunofluorescence NOUN NN Number=Sing _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 using use VERB VBG VerbForm=Ger _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 Ab Ab PROPN NNP Number=Sing _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 RelA Rela NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 subunit subunit NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 iNO iNO PROPN NNP Number=Sing _ _ _ _ 22 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11574 # text = These studies indicate that iNO attenuates iNOS expression in macrophages and inhibits monocyte adhesion to endothelial cells, and suggest that endogenously derived iNO may be an important autoregulatory inhibitor of vascular inflammation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 iNO iNO X GW _ _ _ _ _ 6 attenuates attenuate X GW _ _ _ _ _ 7 iNOS inos X GW _ _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 inhibits inhibits NOUN NNS Number=Plur _ _ _ _ 13 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 14 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 endogenously endogenously ADV RB _ _ _ _ _ 23 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 iNO ino PROPN NNP Number=Sing _ _ _ _ 25 may may AUX MD VerbForm=Fin _ _ _ _ 26 be be AUX VB VerbForm=Inf _ _ _ _ 27 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 important important ADJ JJ Degree=Pos _ _ _ _ 29 autoregulatory autoregulatory ADJ JJ Degree=Pos _ _ _ _ 30 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 vascular vascular ADJ JJ Degree=Pos _ _ _ _ 33 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11575 # text = Document 0030012632 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012632 0030012632 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11576 # text = Human cytomegalovirus binding to human monocytes induces immunoregulatory gene expression. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 cytomegalovirus cytomegalovirus NOUN NN Number=Sing _ _ _ _ 3 binding bind VERB VBG VerbForm=Ger _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 7 induces induces NOUN NNS Number=Plur _ _ _ _ 8 immunoregulatory immunoregulatory ADJ JJ Degree=Pos _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11577 # text = To continue our investigation of the cellular events that occur following human CMV (HCMV) infection, we focused on the regulation of cellular activation following viral binding to human monocytes. 1 To to PART TO _ _ _ _ _ 2 continue continue VERB VB VerbForm=Inf _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 investigation investigation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 8 events event NOUN NNS Number=Plur _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 occur occur VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 following follow VERB VBG VerbForm=Ger _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 CMV CMV PROPN NNP Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 HCMV HCMV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 20 focused focus VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 on on ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 regulation regulation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 following follow VERB VBG VerbForm=Ger _ _ _ _ 28 viral viral ADJ JJ Degree=Pos _ _ _ _ 29 binding binding VERB VBG VerbForm=Ger _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 human human ADJ JJ Degree=Pos _ _ _ _ 32 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 11578 # text = First, we showed that viral binding induced a number of immunoregulatory genes (IL-1beta, A20, NF-kappaB-p105/p50, and IkappaBalpha) in unactivated monocytes and that neutralizing 1 First first ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 viral viral ADJ JJ Degree=Pos _ _ _ _ 7 binding binding NOUN NN Number=Sing _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 number number NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 immunoregulatory immunoregulatory ADJ JJ Degree=Pos _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 A20 A20 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 -kappaB-p105/p50 -kappaB-p105/p50 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 unactivated unactivated ADJ JJ Degree=Pos _ _ _ _ 30 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 that that SCONJ IN _ _ _ _ _ 33 neutralizing neutralize VERB VBG VerbForm=Ger _ _ _ _ # sent_id = 11579 # text = Abs to the major HCMV glycoproteins, gB (UL55) and gH (UL75), inhibited the induction of these genes. 1 Abs Ab NOUN NNS Number=Plur _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 major major ADJ JJ Degree=Pos _ _ _ _ 5 HCMV Hcmv NOUN NN Number=Sing _ _ _ _ 6 glycoproteins glycoprotein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 gB gB PROPN NNP Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 UL55 UL55 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 gH gH PROPN NNP Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 UL75 UL75 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 induction induction NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 23 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 11580 # text = Next, we demonstrated that these viral ligands directly up-regulated monocyte gene expression upon their binding to their appropriate cellular receptors. 1 Next next ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 viral viral ADJ JJ Degree=Pos _ _ _ _ 8 ligands ligand NOUN NNS Number=Plur _ _ _ _ 9 directly directly ADV RB _ _ _ _ _ 10 up up ADV RB _ _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 upon upon ADP IN _ _ _ _ _ 17 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 binding binding NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 appropriate appropriate ADJ JJ Degree=Pos _ _ _ _ 22 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 23 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 11581 # text = We then investigated if HCMV binding also resulted in the translation and secretion of cytokines. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 then then ADV RB PronType=Dem _ _ _ _ 3 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 if if SCONJ IN _ _ _ _ _ 5 HCMV HCMV PROPN NNP Number=Sing _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 resulted result VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 translation translation NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 secretion secretion NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 11582 # text = Our results showed that HCMV binding to monocytes resulted in the production and release of IL-1beta protein. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 HCMV HCMV PROPN NNP Number=Sing _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 9 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 production production NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 release release NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 beta beta NOUN NN Number=Sing _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 11583 # text = Because these induced gene products have NF-kappaB sites in their promoter regions, we next examined whether there was an up-regulation of nuclear NF-kappaB levels. 1 Because because SCONJ IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 products product NOUN NNS Number=Plur _ _ _ _ 6 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 sites site NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 regions region NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 17 next next ADV RB _ _ _ _ _ 18 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 whether whether SCONJ IN _ _ _ _ _ 20 there there PRON EX _ _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 regulation regulation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 31 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 11584 # text = These experiments showed that, in fact, NF-kappaB was translocated to the nucleus following viral binding or purified viral ligand binding. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 experiments experiment NOUN NNS Number=Plur _ _ _ _ 3 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 fact fact NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 translocated translocate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 17 following follow VERB VBG VerbForm=Ger _ _ _ _ 18 viral viral ADJ JJ Degree=Pos _ _ _ _ 19 binding binding NOUN NN Number=Sing _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 viral viral ADJ JJ Degree=Pos _ _ _ _ 23 ligand ligand NOUN NN Number=Sing _ _ _ _ 24 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 11585 # text = Changes in IkappaBalpha levels correlated with the changes in NF-kappaB translocation. 1 Changes change NOUN NNS Number=Plur _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 4 levels level NOUN NNS Number=Plur _ _ _ _ 5 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 changes change NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 translocation translocation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 11586 # text = Lastly, we demonstrated that p38 kinase activity played a central role in IL-1beta production and that it was rapidly up-regulated following infection. 1 Lastly Lastly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 p38 p38 NUM CD NumType=Card _ _ _ _ 7 kinase kinase NOUN NN Number=Sing _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 played play VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 central central ADJ JJ Degree=Pos _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 beta beta NOUN NN Number=Sing _ _ _ _ 18 production production NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 rapidly rapidly ADV RB _ _ _ _ _ 24 up up ADV RB _ _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 following follow VERB VBG VerbForm=Ger _ _ _ _ 28 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 11587 # text = These results support our hypothesis that HCMV initiates a signal transduction pathway that leads to monocyte activation and pinpoints a potential mechanism whereby HCMV infection of monocytes can result in profound pathogenesis, especially in chronic inflammatory-type conditions. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 support support VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 5 hypothesis hypothesis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 HCMV HCMV NOUN NN Number=Sing _ _ _ _ 8 initiates initiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 signal signal NOUN NN Number=Sing _ _ _ _ 11 transduction transduction NOUN NN Number=Sing _ _ _ _ 12 pathway pathway NOUN NN Number=Sing _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 monocyte monocyte VERB VB VerbForm=Inf _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 pinpoints pinpoint NOUN NNS Number=Plur _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 potential potential ADJ JJ Degree=Pos _ _ _ _ 22 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 23 whereby whereby ADP IN _ _ _ _ _ 24 HCMV Hcmv PROPN NNP Number=Sing _ _ _ _ 25 infection infection NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 28 can can AUX MD VerbForm=Fin _ _ _ _ 29 result result VERB VB VerbForm=Inf _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 profound profound ADJ JJ Degree=Pos _ _ _ _ 32 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 especially especially ADV RB _ _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 37 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 type type NOUN NN Number=Sing _ _ _ _ 40 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11588 # text = Document 0030012642 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012642 0030012642 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11589 # text = Evidence that calcineurin is rate-limiting for primary human lymphocyte activation. 1 Evidence evidence SCONJ IN _ _ _ _ _ 2 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 3 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 rate rate NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 limiting limiting NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 primary primary ADJ JJ Degree=Pos _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11590 # text = Cyclosporine (CsA) is both a clinical immunosuppressive drug and a probe to dissect intracellular signaling pathways. 1 Cyclosporine Cyclosporine PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 ) ) PUNCT -RRB- _ _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 both both DET PDT _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 9 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 10 drug drug NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 probe probe NOUN NN Number=Sing _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 dissect dissect VERB VB VerbForm=Inf _ _ _ _ 16 intracellular intracelular ADJ JJ Degree=Pos _ _ _ _ 17 signaling signal NOUN NN Number=Sing _ _ _ _ 18 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 11591 # text = In vitro, CsA inhibits lymphocyte gene activation by inhibiting the phosphatase activity of calcineurin (CN). 1 In in ADP IN _ _ _ _ _ 2 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 CsA csa PROPN NNP Number=Sing _ _ _ _ 5 inhibits inhibits NOUN NNS Number=Plur _ _ _ _ 6 lymphocyte lymphocyte VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 gene gene ADJ JJ Degree=Pos _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 by by SCONJ IN _ _ _ _ _ 10 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 CN CN NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 11592 # text = In clinical use, CsA treatment inhibits 50-75% of CN activity in circulating leukocytes. 1 In in ADP IN _ _ _ _ _ 2 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 3 use use NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 CsA csa PROPN NNP Number=Sing _ _ _ _ 6 treatment treatment NOUN NN Number=Sing _ _ _ _ 7 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 8 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - SYM SYM _ _ _ _ SpaceAfter=No 10 75 75 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 % % SYM NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 CN Cn ADJ JJ Degree=Pos _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 in in SCONJ IN _ _ _ _ _ 16 circulating circulate VERB VBG VerbForm=Ger _ _ _ _ 17 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 11593 # text = We modeled this degree of CN inhibition in primary human leukocytes in vitro in order to study the effect of partial CN inhibition on the downstream signaling events that lead to gene activation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 modeled model VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 degree degree NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 CN Cn NOUN NN Number=Sing _ _ _ _ 7 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 primary primary ADJ JJ Degree=Pos _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 vitro vitro NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 order order NOUN NN Number=Sing _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 study study VERB VB VerbForm=Inf _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 effect effect NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 partial partial ADJ JJ Degree=Pos _ _ _ _ 22 CN Cn NOUN NN Number=Sing _ _ _ _ 23 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 27 signaling signal NOUN NN Number=Sing _ _ _ _ 28 events event NOUN NNS Number=Plur _ _ _ _ 29 that that PRON WDT PronType=Rel _ _ _ _ 30 lead lead VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 gene gene VERB VB VerbForm=Inf _ _ _ _ 33 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 11594 # text = In CsA-treated leukocytes stimulated by calcium ionophore, the degree of reduction in CN activity was accompanied by a similar degree of inhibition of each event tested: dephosphorylation of nuclear factor of activated T cell proteins, nuclear DNA binding, activation of a transfected reporter gene construct, IFN-gamma and IL-2 mRNA accumulation, and IFN-gamma production. 1 In in ADP IN _ _ _ _ _ 2 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ _ 6 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 calcium calcium NOUN NN Number=Sing _ _ _ _ 9 ionophore ionophore ADV RB _ _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 degree degree NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 reduction reduction NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 CN CN ADJ JJ Degree=Pos _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 similar similar ADJ JJ Degree=Pos _ _ _ _ 23 degree degree NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 each each DET DT _ _ _ _ _ 28 event event NOUN NN Number=Sing _ _ _ _ 29 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 30 : : PUNCT : _ _ _ _ _ 31 dephosphorylation dephosphorylation NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 34 factor factor NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 T t PROPN NNP Number=Sing _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 42 DNA dna NOUN NN Number=Sing _ _ _ _ 43 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 activation activation NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 48 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 49 reporter reporter NOUN NN Number=Sing _ _ _ _ 50 gene gene NOUN NN Number=Sing _ _ _ _ 51 construct construct NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 gamma gamma NOUN NN Number=Sing _ _ _ _ 56 and and CCONJ CC _ _ _ _ _ 57 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 59 2 2 NUM CD NumType=Card _ _ _ _ 60 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 61 accumulation accumulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 62 , , PUNCT , _ _ _ _ _ 63 and and CCONJ CC _ _ _ _ _ 64 IFN Ifn ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 65 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 66 gamma gamma NOUN NN Number=Sing _ _ _ _ 67 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 68 . . PUNCT . _ _ _ _ _ # sent_id = 11595 # text = Furthermore, the degree of CN inhibition was reflected by a similar degree of reduction in lymphocyte proliferation and IFN-gamma production in the allogeneic mixed lymphocyte cultures. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 degree degree NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 CN Cn NOUN NN Number=Sing _ _ _ _ 7 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 reflected reflect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 similar similar ADJ JJ Degree=Pos _ _ _ _ 13 degree degree NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 reduction reduction NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 18 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 gamma gamma NOUN NN Number=Sing _ _ _ _ 23 production production NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 allogeneic allogeneic ADJ JJ Degree=Pos _ _ _ _ 27 mixed mix VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 29 cultures culture NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 11596 # text = These data support the conclusion that CN activity is rate-limiting for the activation of primary human T lymphocytes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 support support VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 conclusion conclusion NOUN NN Number=Sing _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 CN Cn ADJ JJ Degree=Pos _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 rate rate NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 limiting limiting NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 primary primary ADJ JJ Degree=Pos _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 T t NOUN NN Number=Sing _ _ _ _ 20 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 11597 # text = Thus, the reduction of CN activity observed in CsA-treated patients is accompanied by a similar degree of reduction in lymphocyte gene activation, and accounts for the immunosuppression observed. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 reduction reduction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 CN CN PROPN NNP Number=Sing _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 patients patient NOUN NNS Number=Plur _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 similar similar ADJ JJ Degree=Pos _ _ _ _ 19 degree degree NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 reduction reduction NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 lymphocyte lymphocyte ADJ JJ Degree=Pos _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 accounts account NOUN NNS Number=Plur _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 immunosuppression immunosuppression NOUN NN Number=Sing _ _ _ _ 32 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11598 # text = Document 0030012646 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012646 0030012646 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11599 # text = Activation of transcription by binding of NF-E1 (YY1) to a newly identified element in the first exon of the human DR alpha gene. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 by by SCONJ IN _ _ _ _ _ 5 binding binding VERB VBG VerbForm=Ger _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 E1 E1 PROPN NNP Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 YY1 YY1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 newly newly ADV RB _ _ _ _ _ 16 identified identify ADJ JJ Degree=Pos _ _ _ _ 17 element element NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 21 exon exon NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 DR Dr NOUN NN Number=Sing _ _ _ _ 26 alpha alpha ADP IN _ _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11600 # text = A previously unrecognized element, located downstream of the start site of transcription in the first exon of the DR alpha gene, has been defined that enhances promoter activity up to eightfold in a position-dependent manner. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 previously previously ADV RB _ _ _ _ _ 3 unrecognized unrecognized ADJ JJ Degree=Pos _ _ _ _ 4 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 downstream downstream NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 start start NOUN NN Number=Sing _ _ _ _ 11 site site NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 17 exon exon NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 DR Dr PROPN NNP Number=Sing _ _ _ _ 21 alpha alpha ADP IN _ _ _ _ _ 22 gene gene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 26 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 that that SCONJ IN _ _ _ _ _ 28 enhances enhance NOUN NNS Number=Plur _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ _ 30 activity activity NOUN NN Number=Sing _ _ _ _ 31 up up ADV RB _ _ _ _ _ 32 to to PART TO _ _ _ _ _ 33 eightfold eightfold VERB VB VerbForm=Inf _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 position position NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 39 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 11601 # text = Mutations in this DNA-binding site abolished binding of a nuclear factor in human B cell nuclear extract and decreased the activity of the DR alpha promoter to a basal level. 1 Mutations Mutation NOUN NNS Number=Plur _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 site site NOUN NN Number=Sing _ _ _ _ 8 abolished abolish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 extract extract NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 decreased decrease VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 DR Dr PROPN NNP Number=Sing _ _ _ _ 27 alpha alpha NOUN NN Number=Sing _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 basal basal ADJ JJ Degree=Pos _ _ _ _ 32 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 11602 # text = Significant sequence homology of this element was found in the DNA of the DR beta, DP alpha and -beta, and DQ alpha genes, always located downstream of the transcriptional start site. 1 Significant significant ADJ JJ Degree=Pos _ _ _ _ 2 sequence sequence NOUN NN Number=Sing _ _ _ _ 3 homology homology NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 element element NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 DNA dna NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 DR Dr PROPN NNP Number=Sing _ _ _ _ 15 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 DP DP NOUN NN Number=Sing _ _ _ _ 18 alpha alpha NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 DQ Dq ADJ JJ Degree=Pos _ _ _ _ 25 alpha alpha NOUN NN Number=Sing _ _ _ _ 26 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 always always ADV RB _ _ _ _ _ 29 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 downstream downstream NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 34 start start NOUN NN Number=Sing _ _ _ _ 35 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 11603 # text = The nuclear factor binds to the DR alpha and DP alpha element but not to the element in the DQ alpha gene. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 binds bind NOUN NNS Number=Plur _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 DR Dr PROPN NNP Number=Sing _ _ _ _ 8 alpha alpha PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 DP DP PROPN NNP Number=Sing _ _ _ _ 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 not not ADV RB _ _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 element element NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 DQ Dq NOUN NN Number=Sing _ _ _ _ 21 alpha alpha ADP IN _ _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 11604 # text = It was identified as NF-E1 (YY1). 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 as as ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 E1 E1 PROPN NNP Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 YY Yy INTJ UH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 11605 # text = This protein, previously identified by its binding to the Ig kappa 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 previously previously ADV RB _ _ _ _ _ 5 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 by by SCONJ IN _ _ _ _ _ 7 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 8 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 Ig ig PROPN NNP Number=Sing _ _ _ _ 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ # sent_id = 11606 # text = 3' enhancer and the Ig heavy chain mu E1 site, thus also appears to be quite important in the regulation of MHC class II gene expression. 1 3 3 X LS _ _ _ _ SpaceAfter=No 2 ' ' PUNCT `` _ _ _ _ _ 3 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 Ig ig ADJ JJ Degree=Pos _ _ _ _ 7 heavy heavy ADJ JJ Degree=Pos _ _ _ _ 8 chain chain NOUN NN Number=Sing _ _ _ _ 9 mu mu NOUN NN Number=Sing _ _ _ _ 10 E1 E1 NUM CD NumType=Card _ _ _ _ 11 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 thus thus ADV RB _ _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 quite quite ADV RB _ _ _ _ _ 19 important important ADJ JJ Degree=Pos _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 regulation regulation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 MHC MHC PROPN NNP Number=Sing _ _ _ _ 25 class class NOUN NN Number=Sing _ _ _ _ 26 II ii NUM CD NumType=Card _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11607 # text = Document 0030012648 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012648 0030012648 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11608 # text = Identification of upstream regulatory elements that repress expression of adult beta-like globin genes in a primitive erythroid environment. 1 Identification identification NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 4 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 5 elements element NOUN NNS Number=Plur _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 repress repress VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 adult adult NOUN NN Number=Sing _ _ _ _ 11 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 like like ADJ JJ Degree=Pos _ _ _ _ 14 globin globin NOUN NN Number=Sing _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 primitive primitive ADJ JJ Degree=Pos _ _ _ _ 19 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 20 environment environment NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11609 # text = Our investigations have focused on localizing cis-elements responsible for the down regulation of the adult beta-like globin genes (delta and beta) in immature, or primitive erythroid tissues. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 investigations investigation NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 focused focus VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 on on SCONJ IN _ _ _ _ _ 6 localizing localizing VERB VBG VerbForm=Ger _ _ _ _ 7 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 elements element NOUN NNS Number=Plur _ _ _ _ 10 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 down down ADJ JJ Degree=Pos _ _ _ _ 14 regulation regulation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 adult adult NOUN NN Number=Sing _ _ _ _ 18 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 like like ADJ JJ Degree=Pos _ _ _ _ 21 globin globin NOUN NN Number=Sing _ _ _ _ 22 genes gene NOUN NNS Number=Plur _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 delta delta NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 immature immature ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 or or CCONJ CC _ _ _ _ _ 32 primitive primitive ADJ JJ Degree=Pos _ _ _ _ 33 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 34 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 11610 # text = We studied their activity after transfection into K562 cells, an erythroleukemia cell line with an embryonic-fetal phenotype. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 4 activity activity NOUN NN Number=Sing _ _ _ _ 5 after after ADP IN _ _ _ _ _ 6 transfection transfection NOUN NN Number=Sing _ _ _ _ 7 into into ADP IN _ _ _ _ _ 8 K562 K562 NUM CD NumType=Card _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 erythroleukemia erythroleukemia ADJ JJ Degree=Pos _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 line line NOUN NN Number=Sing _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 embryonic embryonic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 fetal fetal ADJ JJ Degree=Pos _ _ _ _ 20 phenotype phenotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 11611 # text = Analyzed DNA sequences included delta and beta 5' flanking regions extending from approximately -500 to +50bp (promoter regions), truncated delta and beta 5' flanking regions extending from approximately -250 to +50 bp, and chimeric promoter constructions, which consisted of a distal delta or beta fragment fused to a proximal beta or delta sequence. 1 Analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ _ 3 sequences sequence NOUN NNS Number=Plur _ _ _ _ 4 included include VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 delta delta NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 beta beta NOUN NN Number=Sing _ _ _ _ 8 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ' ' PUNCT `` _ _ _ _ _ 10 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 11 regions region NOUN NNS Number=Plur _ _ _ _ 12 extending extend VERB VBG VerbForm=Ger _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 approximately approximately ADV RB _ _ _ _ _ 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 500 500 NUM CD NumType=Card _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 + + SYM SYM _ _ _ _ SpaceAfter=No 19 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 bp bp NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 promoter promoter NOUN NN Number=Sing _ _ _ _ 23 regions region NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 truncated truncated ADJ JJ Degree=Pos _ _ _ _ 27 delta delta NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 beta beta NOUN NN Number=Sing _ _ _ _ 30 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ' ' PUNCT `` _ _ _ _ _ 32 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 33 regions region NOUN NNS Number=Plur _ _ _ _ 34 extending extend VERB VBG VerbForm=Ger _ _ _ _ 35 from from ADP IN _ _ _ _ _ 36 approximately approximately ADV RB _ _ _ _ _ 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 250 250 NUM CD NumType=Card _ _ _ _ 39 to to ADP IN _ _ _ _ _ 40 +50 +50 NUM CD NumType=Card _ _ _ _ 41 bp bp NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 chimeric chimeric ADJ JJ Degree=Pos _ _ _ _ 45 promoter promoter NOUN NN Number=Sing _ _ _ _ 46 constructions construction NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 which which PRON WDT PronType=Rel _ _ _ _ 49 consisted consist VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 50 of of ADP IN _ _ _ _ _ 51 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 52 distal distal ADJ JJ Degree=Pos _ _ _ _ 53 delta delta NOUN NN Number=Sing _ _ _ _ 54 or or CCONJ CC _ _ _ _ _ 55 beta beta NOUN NN Number=Sing _ _ _ _ 56 fragment fragment NOUN NN Number=Sing _ _ _ _ 57 fused fuse VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 58 to to ADP IN _ _ _ _ _ 59 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 60 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 61 beta beta NOUN NN Number=Sing _ _ _ _ 62 or or CCONJ CC _ _ _ _ _ 63 delta delof NOUN NN Number=Sing _ _ _ _ 64 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 65 . . PUNCT . _ _ _ _ _ # sent_id = 11612 # text = In CAT reporter constructions no appreciable level of CAT activity was supported by the beta globin promoter, and only low level activity by the delta promoter. 1 In in ADP IN _ _ _ _ _ 2 CAT cat ADJ JJ Degree=Pos _ _ _ _ 3 reporter reporter NOUN NN Number=Sing _ _ _ _ 4 constructions construction NOUN NNS Number=Plur _ _ _ _ 5 no no DET DT _ _ _ _ _ 6 appreciable appreciable ADJ JJ Degree=Pos _ _ _ _ 7 level level NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 CAT Cat ADJ JJ Degree=Pos _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 supported support VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 beta beta NOUN NN Number=Sing _ _ _ _ 16 globin globin ADP IN _ _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 only only ADV RB _ _ _ _ _ 21 low low ADJ JJ Degree=Pos _ _ _ _ 22 level level NOUN NN Number=Sing _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 delta delta NOUN NN Number=Sing _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 11613 # text = Truncation of the beta globin promoter led to a 2-3 fold increase in promoter activity. 1 Truncation Truncation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 beta beta NOUN NN Number=Sing _ _ _ _ 5 globin globin NOUN NN Number=Sing _ _ _ _ 6 promoter promoter NOUN NN Number=Sing _ _ _ _ 7 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - SYM SYM _ _ _ _ SpaceAfter=No 12 3 3 NUM CD NumType=Card _ _ _ _ 13 fold fold NOUN NN Number=Sing _ _ _ _ 14 increase increase NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 promoter promoter ADJ JJ Degree=Pos _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 11614 # text = In contrast, deletion of the upstream portion of the delta promoter led to a 10 fold decrease in expression. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 deletion deletion NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 8 portion portion NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 delta delta PROPN NNP Number=Sing _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 10 10 NUM CD NumType=Card _ _ _ _ 17 fold fold NOUN NN Number=Sing _ _ _ _ 18 decrease decrease NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 11615 # text = Coupling of the upstream beta globin sequence from approximately -500 to -250 bp to the truncated delta promoter fragment led to complete extinction of transcription activity, consistent with a negative regulatory effect of the beta globin gene upstream element(s). 1 Coupling Coupling NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 5 beta beta NOUN NN Number=Sing _ _ _ _ 6 globin globin NOUN NN Number=Sing _ _ _ _ 7 sequence sequence NOUN NN Number=Sing _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 approximately approximately ADV RB _ _ _ _ _ 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 500 500 NUM CD NumType=Card _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 - - SYM SYM _ _ _ _ SpaceAfter=No 14 250 250 NUM CD NumType=Card _ _ _ _ 15 bp bp NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 truncated truncate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 delta delta NOUN NN Number=Sing _ _ _ _ 20 promoter promoter NOUN NN Number=Sing _ _ _ _ 21 fragment fragment NOUN NN Number=Sing _ _ _ _ 22 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 complete complete ADJ JJ Degree=Pos _ _ _ _ 25 extinction extinction NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 negative negative ADJ JJ Degree=Pos _ _ _ _ 34 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 35 effect effect NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 beta beta NOUN NN Number=Sing _ _ _ _ 39 globin globin NOUN NN Number=Sing _ _ _ _ 40 gene gene NOUN NN Number=Sing _ _ _ _ 41 upstream upstream NOUN NN Number=Sing _ _ _ _ 42 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 s s X AFX _ _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 11616 # text = Fusion of the upstream portion of the delta promoter to the truncated beta globin promoter yielded a modest increase in promoter strength relative to the truncated beta gene promoter, indicating the presence of a positive transcriptional element(s) in the upstream delta globin regulatory region. 1 Fusion fusion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 5 portion portion NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 delta delta PROPN NNP Number=Sing _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 truncated truncate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 beta beta NOUN NN Number=Sing _ _ _ _ 14 globin globin NOUN NN Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 yielded yield VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 modest modest ADJ JJ Degree=Pos _ _ _ _ 19 increase increase NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 strength strength NOUN NN Number=Sing _ _ _ _ 23 relative relative ADV RB _ _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 truncated truncate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 beta beta NOUN NN Number=Sing _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 presence presence NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 positive positive ADJ JJ Degree=Pos _ _ _ _ 37 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 38 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 s s X AFX _ _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 45 delta delta NOUN NN Number=Sing _ _ _ _ 46 globin globin ADP IN _ _ _ _ _ 47 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 48 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 11617 # text = Site-directed mutagenesis of binding sites for the repressor proteins BP1 and BP2 in the upstream portion of the beta globin gene flanking region led to a 4-6 fold increase in promoter activity. 1 Site site ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ _ 5 of of SCONJ IN _ _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 sites site NOUN NNS Number=Plur _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 repressor repressor NOUN NN Number=Sing _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 BP1 BP1 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 BP2 BP2 NUM CD NumType=Card _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 18 portion portion NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 beta beta NOUN NN Number=Sing _ _ _ _ 22 globin globin NOUN NN Number=Sing _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 25 region region NOUN NN Number=Sing _ _ _ _ 26 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 - - SYM SYM _ _ _ _ SpaceAfter=No 31 6 6 NUM CD NumType=Card _ _ _ _ 32 fold fold NOUN NN Number=Sing _ _ _ _ 33 increase increase NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 promoter promoter ADJ JJ Degree=Pos _ _ _ _ 36 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 11618 # text = DNase I footprinting of the upstream delta-globin region revealed protected sequences corresponding to consensus binding sites for GATA-1 and BP2. 1 DNase DNase INTJ UH _ _ _ _ _ 2 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 3 footprinting footprint VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 7 delta delta NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 globin globin NOUN NN Number=Sing _ _ _ _ 10 region region NOUN NN Number=Sing _ _ _ _ 11 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 protected protect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 sequences sequence NOUN NNS Number=Plur _ _ _ _ 14 corresponding correspond VERB VBG VerbForm=Ger _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 consensus consensus VERB VB VerbForm=Inf _ _ _ _ 17 binding binding VERB VBG VerbForm=Ger _ _ _ _ 18 sites site NOUN NNS Number=Plur _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 BP2 BP2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 11619 # text = These results confirm that sequences in the upstream promoter region of the adult beta globin gene contribute to its factor-mediated suppression early in development and then may modulate its expression at a later stage. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 confirm confirm VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 sequences sequence NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 region region NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 adult adult NOUN NN Number=Sing _ _ _ _ 14 beta beta NOUN NN Number=Sing _ _ _ _ 15 globin globin ADP IN _ _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 contribute contribute NOUN NN Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 suppression suppression NOUN NN Number=Sing _ _ _ _ 24 early early ADV RB Degree=Pos _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 development development NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 then then ADV RB PronType=Dem _ _ _ _ 29 may may AUX MD VerbForm=Fin _ _ _ _ 30 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 31 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ _ 33 at at ADP IN _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 later later ADJ JJR Degree=Cmp _ _ _ _ 36 stage stage NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11620 # text = Document 0030012649 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012649 0030012649 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11621 # text = IL-2 and IL-7 induce heterodimerization of STAT5 isoforms in human peripheral blood T lymphoblasts. 1 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 7 7 NUM CD NumType=Card _ _ _ _ 8 induce induce NOUN NN Number=Sing _ _ _ _ 9 heterodimerization heterodimerization NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 STAT5 STAT5 NUM CD NumType=Card _ _ _ _ 12 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 16 blood blood NOUN NN Number=Sing _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 lymphoblasts lymphoblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11622 # text = Despite differences in T cell responses induced by interleukin (IL)-2 and IL-7, both cytokines modulate T cell functions by activation of signal transducers and activators of transcription (STAT) proteins. 1 Despite despite ADP IN _ _ _ _ _ 2 differences difference NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 responses response NOUN NNS Number=Plur _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 both both CCONJ CC _ _ _ _ _ 21 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 22 modulate modulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 T t NUM CD NumType=Card _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 functions function NOUN NNS Number=Plur _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 signal signal ADJ JJ Degree=Pos _ _ _ _ 30 transducers transducer NOUN NNS Number=Plur _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 activators activator NOUN NNS Number=Plur _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 STAT Stat NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 11623 # text = We examined the contribution of the two isoforms of STAT5, STAT5A and STAT5B, to IL-2- and IL-7-induced activation of human peripheral blood T lymphoblasts. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 contribution contribution NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 isoforms isoform NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 STAT5 STAT5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 STAT5 STAT5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 A a PROPN NNP Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 STAT5B STAT5B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 32 blood blood NOUN NN Number=Sing _ _ _ _ 33 T t PROPN NNP Number=Sing _ _ _ _ 34 lymphoblasts lymphoblast NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 11624 # text = Both cytokines induced assembly of STAT5A and STAT5B containing complexes capable of binding to the interferon-gamma activation sequence (GAS), and these complexes rapidly translocated (within 1 min) into the nucleus of IL-2- or IL-7-treated cells. 1 Both both DET DT _ _ _ _ _ 2 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 assembly assembly NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 STAT5 STAT5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 A A PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 STAT5B Stat5b PROPN NNP Number=Sing _ _ _ _ 10 containing containing VERB VBG VerbForm=Ger _ _ _ _ 11 complexes complex NOUN NNS Number=Plur _ _ _ _ 12 capable capable ADJ JJ Degree=Pos _ _ _ _ 13 of of SCONJ IN _ _ _ _ _ 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 gamma gamma NOUN NN Number=Sing _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 sequence sequence NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 GAS gas PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 28 complexes complex NOUN NNS Number=Plur _ _ _ _ 29 rapidly rapidly ADV RB _ _ _ _ _ 30 translocated translocate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 within within ADP IN _ _ _ _ _ 33 1 1 NUM CD NumType=Card _ _ _ _ 34 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 into into ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ _ 44 or or CCONJ CC _ _ _ _ _ 45 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 11625 # text = The kinetics of this translocation were delayed in IL-7-treated as compared to IL-2-treated cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 translocation translocation NOUN NN Number=Sing _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 delayed delay VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 treated treat VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 11626 # text = IL-2 and IL-7 were equivalent in their ability to induce tyrosine phosphorylation of STAT5A and STAT5B and to facilitate binding of these STATs to an immobilized GAS element. 1 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 7 7 NUM CD NumType=Card _ _ _ _ 8 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 equivalent equivalent ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 12 ability ability NOUN NN Number=Sing _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 induce induce VERB VB VerbForm=Inf _ _ _ _ 15 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 16 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 STAT5 STAT5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 A A PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 STAT5B STAT5B PROPN NNP Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 facilitate facilitate VERB VB VerbForm=Inf _ _ _ _ 25 binding binding VERB VBG VerbForm=Ger _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 28 STATs STAT NOUN NNS Number=Plur _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 immobilized immobilize ADJ JJ Degree=Pos _ _ _ _ 32 GAS gas NOUN NN Number=Sing _ _ _ _ 33 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 11627 # text = Both IL-2 and IL-7 induced substantial amounts of STAT5A/STAT5B heterodimerization. 1 Both both DET DT _ _ _ _ _ 2 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 7 7 NUM CD NumType=Card _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 substantial substantial ADJ JJ Degree=Pos _ _ _ _ 11 amounts amount NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 STAT5A/ Stat5a/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 STAT5B Stat5b NOUN NN Number=Sing _ _ _ _ 15 heterodimerization heterodimerization NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 11628 # text = Moreover, we observed constitutive association of STAT3 with each STAT5 isomer. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 6 association association NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 STAT3 STAT3 NUM CD NumType=Card _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 each each DET DT _ _ _ _ _ 11 STAT5 stat5 NUM CD NumType=Card _ _ _ _ 12 isomer isomer NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 11629 # text = These data suggest that IL-2 and IL-7 induce assembly of STAT heterodimers in a similar manner and that subsequent cellular responses may be driven by induction of similar sets of genes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 7 7 NUM CD NumType=Card _ _ _ _ 12 induce induce NOUN NN Number=Sing _ _ _ _ 13 assembly assembly NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 16 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 similar similar ADJ JJ Degree=Pos _ _ _ _ 20 manner manner NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 23 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 24 cellular cellular NOUN NN Number=Sing _ _ _ _ 25 responses response NOUN NNS Number=Plur _ _ _ _ 26 may may AUX MD VerbForm=Fin _ _ _ _ 27 be be AUX VB VerbForm=Inf _ _ _ _ 28 driven drive VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 induction induction NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 similar similar ADJ JJ Degree=Pos _ _ _ _ 33 sets set NOUN NNS Number=Plur _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11630 # text = Document 0030012651 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012651 0030012651 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11631 # text = Characterization of the human immunodeficiency virus type 1 enhancer-binding proteins from the human T-cell line Jurkat. 1 Characterization Characterization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 type type NOUN NN Number=Sing _ _ _ _ 8 1 1 NUM CD NumType=Card _ _ _ _ 9 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 proteins protein NOUN NNS Number=Plur _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 line line NOUN NN Number=Sing _ _ _ _ 19 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11632 # text = The transcription of the human immunodeficiency virus type 1 (HIV-1) is under the control of cellular proteins that bind to the viral long terminal repeat (LTR). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 7 virus virus NOUN NN Number=Sing _ _ _ _ 8 type type NOUN NN Number=Sing _ _ _ _ 9 1 1 NUM CD NumType=Card _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 under under ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 control control NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 21 proteins protein NOUN NNS Number=Plur _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 viral viral ADJ JJ Degree=Pos _ _ _ _ 27 long long ADJ JJ Degree=Pos _ _ _ _ 28 terminal terminal NOUN NN Number=Sing _ _ _ _ 29 repeat repeat NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 11633 # text = Among the protein-binding regions of the HIV-1 LTR is the transcription-enhancer region. 1 Among among ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 protein- protein- SYM NFP _ _ _ _ SpaceAfter=No 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 regions region NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 LTR Ltr NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 17 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 11634 # text = We show that at least one inducible, C1, and one constitutive, C2, protein can bind to the HIV enhancer in Jurkat cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 4 at at ADV RB _ _ _ _ _ 5 least least ADV RBS Degree=Sup _ _ _ _ 6 one one NUM CD NumType=Card _ _ _ _ 7 inducible inducible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 C1 C1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 one one NUM CD NumType=Card _ _ _ _ 13 constitutive constitutive NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 C2 c2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 can can AUX MD VerbForm=Fin _ _ _ _ 19 bind bind VERB VB VerbForm=Inf _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 HIV HIV PROPN NNP Number=Sing _ _ _ _ 23 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 11635 # text = The two proteins differ in their surface charge, since they are separable by anion-exchange chromatography. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 proteins protein NOUN NNS Number=Plur _ _ _ _ 4 differ differ VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 7 surface surface NOUN NN Number=Sing _ _ _ _ 8 charge charge NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 since since SCONJ IN _ _ _ _ _ 11 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 separable separable ADJ JJ Degree=Pos _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 anion anion NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 exchange exchange NOUN NN Number=Sing _ _ _ _ 18 chromatography chromatography NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 11636 # text = Bivalent cations such as Mg2+ and Zn2+ differentially affect their binding to oligonucleotides which contain the HIV-enhancer domain. 1 Bivalent Bivalent ADJ JJ Degree=Pos _ _ _ _ 2 cations cation NOUN NNS Number=Plur _ _ _ _ 3 such such ADJ JJ Degree=Pos _ _ _ _ 4 as as ADP IN _ _ _ _ _ 5 Mg2 Mg2 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 + + SYM SYM _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 Zn2 Zn2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 + + SYM SYM _ _ _ _ _ 10 differentially differentially ADV RB _ _ _ _ _ 11 affect affect VERB VB VerbForm=Inf _ _ _ _ 12 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 binding binding VERB VBG VerbForm=Ger _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 22 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 11637 # text = Both C1 and C2 proteins also bind to a similar sequence found in the interleukin-2-receptor alpha-subunit enhancer. 1 Both both CCONJ CC _ _ _ _ _ 2 C1 c1 PROPN NNP Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 C2 C2 NUM CD NumType=Card _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 bind bind VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 similar similar ADJ JJ Degree=Pos _ _ _ _ 11 sequence sequence NOUN NN Number=Sing _ _ _ _ 12 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 receptor receptor NOUN NN Number=Sing _ _ _ _ 20 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 subunit subunit NOUN NN Number=Sing _ _ _ _ 23 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 11638 # text = The inducible C1 protein was partially purified by three chromatographic steps and characterized by u.v. cross-linking as a 47 kDa protein. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 3 C1 C1 NOUN NN Number=Sing _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 partially partially ADV RB _ _ _ _ _ 7 purified purify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 three three NUM CD NumType=Card _ _ _ _ 10 chromatographic chromatographic ADJ JJ Degree=Pos _ _ _ _ 11 steps step NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 u.v. u.v. NOUN NN Number=Sing _ _ _ _ 16 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 47 47 NUM CD NumType=Card _ _ _ _ 21 kDa kDa NOUN NN Number=Sing _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11639 # text = Document 0030012652 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012652 0030012652 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11640 # text = Cyclosporin A-resistant transactivation of the IL-2 promoter requires activity of okadaic acid-sensitive serine/threonine phosphatases. 1 Cyclosporin Cyclosporin VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 A a DET DT Definite=Ind|PronType=Art _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 resistant resistant NOUN NN Number=Sing _ _ _ _ 5 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 16 acid acid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 19 serine serine NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 threonine threonine NUM CD NumType=Card _ _ _ _ 22 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11641 # text = Expression of the IL-2 gene requires activation of T cells through stimulation of the TCR and costimulation through accessory receptors. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 through through ADP IN _ _ _ _ _ 14 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 TCR Tcr NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 costimulation costimulation NOUN NN Number=Sing _ _ _ _ 20 through through ADP IN _ _ _ _ _ 21 accessory accessory ADJ JJ Degree=Pos _ _ _ _ 22 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 11642 # text = We have found recently that okadaic acid-sensitive Ser/Thr phosphatases are involved in a cyclosporin A-insensitive pathway that selectively transmits costimulatory signals. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 recently recently ADV RB _ _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 7 acid acid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 10 Ser/ ser/ PUNCT HYPH _ _ _ _ SpaceAfter=No 11 Thr Thr NOUN NN Number=Sing _ _ _ _ 12 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 involved involved ADJ JJ Degree=Pos _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 18 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 insensitive insensitive ADJ JJ Degree=Pos _ _ _ _ 21 pathway pathway NOUN NN Number=Sing _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 selectively selectively ADV RB _ _ _ _ _ 24 transmits transmit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 26 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 11643 # text = In this study, we analyzed whether activities of these phosphatases are necessary for the expression of the IL-2 gene. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 whether whether SCONJ IN _ _ _ _ _ 8 activities activity NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 11644 # text = In both activated peripheral blood T lymphocytes and activated tumorigenic T cell lines, IL-2 gene expression was blocked at the transcriptional level by okadaic acid. 1 In in ADP IN _ _ _ _ _ 2 both both DET DT _ _ _ _ _ 3 activated activated VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 5 blood blood NOUN NN Number=Sing _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 tumorigenic tumorigenic ADJ JJ Degree=Pos _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 at at ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 25 level level NOUN NN Number=Sing _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 28 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 11645 # text = The transcription factors active at the IL-2 promoter were differentially influenced: upon down-modulation of okadaic acid-sensitive phosphatases, transactivation by octamer, NF-kappa B, and NF of activated T cells proteins was abrogated, while transactivation by AP-1 proteins was even enhanced. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 active active ADJ JJ Degree=Pos _ _ _ _ 5 at at ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 differentially differentially ADV RB _ _ _ _ _ 13 influenced influence VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 14 : : PUNCT : _ _ _ _ _ 15 upon upon ADP IN _ _ _ _ _ 16 down down ADV RB _ _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 modulation modulation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 21 acid acid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 24 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappa kappa NOUN NN Number=Sing _ _ _ _ 33 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 NF NF ADP IN _ _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 T t PROPN NNP Number=Sing _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ _ 41 proteins protein NOUN NNS Number=Plur _ _ _ _ 42 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 43 abrogated abrogate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 while while SCONJ IN _ _ _ _ _ 46 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 47 by by ADP IN _ _ _ _ _ 48 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT , _ _ _ _ SpaceAfter=No 50 1 1 NUM CD NumType=Card _ _ _ _ 51 proteins protein NOUN NNS Number=Plur _ _ _ _ 52 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 53 even even ADV RB _ _ _ _ _ 54 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11646 # text = Document 0030012653 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012653 0030012653 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11647 # text = TCL1 oncogene activation in preleukemic T cells from a case of ataxia-telangiectasia. 1 TCL1 TCL1 NUM CD NumType=Card _ _ _ _ 2 oncogene oncogene ADJ JJ Degree=Pos _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 preleukemic preleukemic ADJ JJ Degree=Pos _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 case case NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 ataxia ataxia NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 telangiectasia telangiectasia NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11648 # text = The TCL1 oncogene on human chromosome 14q32.1 is involved in chromosome translocations [t(14;14)(q11;q32.1) and t(7;14)(q35;q32.1)] and inversions [inv14(q11;q32.1)] with TCR alpha/beta loci in T-cell leukemias, such as T-prolymphocytic (T-PLL). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 TCL1 TCL1 NUM CD NumType=Card _ _ _ _ 3 oncogene oncogene NOUN NN Number=Sing _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 7 14q32.1 14q32.1 NUM CD NumType=Card _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 involved involved ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 chromosome chromosome ADJ JJ Degree=Pos _ _ _ _ 12 translocations translocation NOUN NNS Number=Plur _ _ _ _ 13 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 t t NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 14;14 14;14 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 q11;q32.1 q11;q32.1 X LS _ _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 t( t( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 7;14 7;14 X LS _ _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 q35;q32.1 q35;q32.1 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 ] ] PUNCT -RRB- _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 inversions inversion NOUN NNS Number=Plur _ _ _ _ 31 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 inv14 inv14 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 q11; q11; PUNCT , _ _ _ _ SpaceAfter=No 35 q32.1 q32.1 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 ] ] PUNCT -RRB- _ _ _ _ _ 38 with with ADP IN _ _ _ _ _ 39 TCR TCR NOUN NN Number=Sing _ _ _ _ 40 alpha/ alpha/ PUNCT HYPH _ _ _ _ SpaceAfter=No 41 beta beta NOUN NN Number=Sing _ _ _ _ 42 loci loci NOUN NN Number=Sing _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 cell cell NOUN NN Number=Sing _ _ _ _ 46 leukemias leukemia NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 such such ADJ JJ Degree=Pos _ _ _ _ 49 as as ADP IN _ _ _ _ _ 50 T-prolymphocytic T-prolymphocytic PROPN NNP Number=Sing _ _ _ _ 51 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 52 T T PROPN NNP Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 54 PLL PLL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 55 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 11649 # text = It is also involved in T- acute and- chronic leukemias arising in cases of ataxia-telangiectasia (AT), an immunodeficiency syndrome. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 involved involved ADJ JJ Degree=Pos _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 T T PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ _ 8 acute acute VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 and and CCONJ CC _ _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ _ 11 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 12 leukemias leukemia NOUN NNS Number=Plur _ _ _ _ 13 arising arise VERB VBG VerbForm=Ger _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 cases cas NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 ataxia- ataxia- SYM NFP _ _ _ _ SpaceAfter=No 18 telangiectasia telangiectasia NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 AT and ADV RB _ _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 immunodeficiency immunodeficiency ADJ JJ Degree=Pos _ _ _ _ 25 syndrome syndrome NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11650 # text = Similar chromosomal rearrangements occur also in the clonally expanded T cells in AT patients before the appearance of the overt leukemia. 1 Similar similar ADJ JJ Degree=Pos _ _ _ _ 2 chromosomal chromosomal ADJ JJ Degree=Pos _ _ _ _ 3 rearrangements rearrangement NOUN NNS Number=Plur _ _ _ _ 4 occur occur VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 clonally clonally ADV RB _ _ _ _ _ 9 expanded expand VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 AT at ADJ JJ Degree=Pos _ _ _ _ 14 patients patient NOUN NNS Number=Plur _ _ _ _ 15 before before ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 appearance appearance NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 overt overt ADJ JJ Degree=Pos _ _ _ _ 21 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 11651 # text = We have analyzed the expression of TCL1 mRNA and protein in peripheral blood lymphocytes (PBLs) from four AT cases and from healthy controls. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 TCL1 TCL1 PROPN NNP Number=Sing _ _ _ _ 8 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 13 blood blood NOUN NN Number=Sing _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 PBLs PBL NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 four four NUM CD NumType=Card _ _ _ _ 20 AT at ADP IN _ _ _ _ _ 21 cases casis NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 25 controls control NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11652 # text = We found that the TCL1 gene was overexpressed in the PBLs of an AT patient with a large clonal T-cell population exhibiting the t(14;14) translocation but not in the lymphocytes of the other cases. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 TCL1 tCL1 NOUN NN Number=Sing _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 overexpressed overexpress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 PBLs PBLs NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 AT at ADJ JJ Degree=Pos _ _ _ _ 15 patient patient NOUN NN Number=Sing _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 large large ADJ JJ Degree=Pos _ _ _ _ 19 clonal clonal ADJ JJ Degree=Pos _ _ _ _ 20 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 population population NOUN NN Number=Sing _ _ _ _ 23 exhibiting exhibite VERB VBG VerbForm=Ger _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 t t NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 14;14 14;14 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 translocation translocation NOUN NN Number=Sing _ _ _ _ 30 but but CCONJ CC _ _ _ _ _ 31 not not PART RB _ _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 other other ADJ JJ Degree=Pos _ _ _ _ 38 cases case NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 11653 # text = Fluorescence in situ hybridization of the TCL1 genomic locus to lymphocyte metaphases from the AT patient with the T-cell clonal expansion showed that the breakpoint of the t(14;14) translocation lies within the TCL1 locus and is accompanied by an inverted duplication of the distal part of chromosome 14. 1 Fluorescence Fluorescence NOUN NN Number=Sing _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 situ situ NOUN NN Number=Sing _ _ _ _ 4 hybridization hybridization NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 TCL1 TCL1 NUM CD NumType=Card _ _ _ _ 8 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 9 locus locus NOUN NN Number=Sing _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 lymphocyte lymphocyte VERB VB VerbForm=Inf _ _ _ _ 12 metaphases metaphase NOUN NNS Number=Plur _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 AT At NOUN NN Number=Sing _ _ _ _ 16 patient patient NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 clonal clonal ADJ JJ Degree=Pos _ _ _ _ 22 expansion expansion NOUN NN Number=Sing _ _ _ _ 23 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 breakpoint breakpoint NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 t t NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 14; 14; PUNCT , _ _ _ _ SpaceAfter=No 32 14 14 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 translocation translocation NOUN NN Number=Sing _ _ _ _ 35 lies lie VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 within within ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 TCL1 tCL1 NOUN NN Number=Sing _ _ _ _ 39 locus locus NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 42 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 43 by by ADP IN _ _ _ _ _ 44 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 45 inverted invert VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 duplication duplication NOUN NN Number=Sing _ _ _ _ 47 of of ADP IN _ _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 distal distal ADJ JJ Degree=Pos _ _ _ _ 50 part part NOUN NN Number=Sing _ _ _ _ 51 of of ADP IN _ _ _ _ _ 52 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 53 14 14 NUM CD NumType=Card _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 11654 # text = These data indicate that TCL1 is activated in preleukemic clonal cells as a consequence of chromosome translocation involving sequences from the TCR locus at 14q11. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 TCL1 TCL1 PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 preleukemic preleukemic ADJ JJ Degree=Pos _ _ _ _ 10 clonal clonal ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 consequence consequence NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 chromosome chromosome DET DT _ _ _ _ _ 17 translocation translocation NOUN NN Number=Sing _ _ _ _ 18 involving involve VERB VBG VerbForm=Ger _ _ _ _ 19 sequences sequence NOUN NNS Number=Plur _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 TCR TCR PROPN NNP Number=Sing _ _ _ _ 23 locus locus NOUN NN Number=Sing _ _ _ _ 24 at at ADP IN _ _ _ _ _ 25 14q11 14q11 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11655 # text = Deregulation of TCL1 is the first event in the initiation of malignancy in these types of leukemias and represents a potential tool for clinical evaluation. 1 Deregulation deregulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 TCL1 TCL1 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 7 event event NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 initiation initiation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 malignancy malignancy NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 15 types type NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 leukemias leukemia NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 represents represent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 potential potential ADJ JJ Degree=Pos _ _ _ _ 22 tool tool NOUN NN Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 25 evaluation evaluation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11656 # text = Document 0030012656 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012656 0030012656 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11657 # text = Arrested development: understanding v-abl. 1 Arrested arrest ADJ JJ Degree=Pos _ _ _ _ 2 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 : : PUNCT : _ _ _ _ _ 4 understanding understanding NOUN NN Number=Sing _ _ _ _ 5 v- v- PUNCT , _ _ _ _ SpaceAfter=No 6 abl abl NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11658 # text = The protein tyrosine kinase activity of the v-abl oncogene has been demonstrated to subvert the normal second messenger systems used by lymphoid cells for growth and differentiation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 4 kinase kinase NOUN NN Number=Sing _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 v- v- SYM NFP _ _ _ _ SpaceAfter=No 9 abl abl ADJ JJ Degree=Pos _ _ _ _ 10 oncogene oncogene NOUN NN Number=Sing _ _ _ _ 11 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 13 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 subvert subvert VERB VB VerbForm=Inf _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 normal normal ADJ JJ Degree=Pos _ _ _ _ 18 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 19 messenger messenger NOUN NN Number=Sing _ _ _ _ 20 systems system NOUN NNS Number=Plur _ _ _ _ 21 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 growth growth NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 11659 # text = Transformation of bone marrow with the Abelson murine leukemia virus results in the appearance of B cell lineage cells arrested at the pre-B cell stage. 1 Transformation transformation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 bone bone NOUN NN Number=Sing _ _ _ _ 4 marrow marrow NOUN NN Number=Sing _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 Abelson Abelson PROPN NNP Number=Sing _ _ _ _ 8 murine murine NOUN NN Number=Sing _ _ _ _ 9 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 10 virus virus NOUN NN Number=Sing _ _ _ _ 11 results result NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 appearance appearance NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 B b ADJ JJ Degree=Pos _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 lineage lineage NOUN NN Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 arrested arrest VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 at at ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 pre pre X AFX _ _ _ _ SpaceAfter=No 24 -B -b ADJ JJ Degree=Pos _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 stage stage NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 11660 # text = Recent reports have characterized these cells expressing high v-abl kinase activity as deficient in detectable NF-kappaB 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 reports report NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 8 high high ADJ JJ Degree=Pos _ _ _ _ 9 v- v- SYM NFP _ _ _ _ SpaceAfter=No 10 abl abl ADJ JJ Degree=Pos _ _ _ _ 11 kinase kinase NOUN NN Number=Sing _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ # sent_id = 11661 # text = DNA binding activity and low level RAG gene expression. 1 DNA dna NOUN NN Number=Sing _ _ _ _ 2 binding binde VERB VBG VerbForm=Ger _ _ _ _ 3 activity activity NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 low low ADJ JJ Degree=Pos _ _ _ _ 6 level level NOUN NN Number=Sing _ _ _ _ 7 RAG rag NOUN NN Number=Sing _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 11662 # text = These observations suggest that v-abl may be inhibiting the differentiation of B cells by blocking these two crucial elements in the maturation pathway. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 v- v- SYM NFP _ _ _ _ SpaceAfter=No 6 abl abl NOUN NN Number=Sing _ _ _ _ 7 may may AUX MD VerbForm=Fin _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 inhibiting inhibit VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 B b ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 by by SCONJ IN _ _ _ _ _ 16 blocking block VERB VBG VerbForm=Ger _ _ _ _ 17 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 18 two two NUM CD NumType=Card _ _ _ _ 19 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 20 elements element NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 maturation maturation NOUN NN Number=Sing _ _ _ _ 24 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11663 # text = Document 0030012657 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012657 0030012657 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11664 # text = Mechanisms of transactivation by nuclear factor of activated T cells-1. 1 Mechanisms Mechanism NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11665 # text = Nuclear factor of activated T cells-family proteins (NFAT1/NFATp, NFATc, NFAT3, and NFAT4/NFATx/NFATc3) play a key role in the transcription of cytokine genes and other genes during the immune response. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 family family NOUN NN Number=Sing _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 NFAT1 NFAT1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 NFATp NFATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 NFATc NFATc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 NFAT3 NFAT3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 NFAT4/NFATx NFAT4/NFATx PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 NFATc3 NFATc3 X LS _ _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 play play VERB VB VerbForm=Inf _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 key key ADJ JJ Degree=Pos _ _ _ _ 27 role role NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 33 genes gene NOUN NNS Number=Plur _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 other other ADJ JJ Degree=Pos _ _ _ _ 36 genes gene NOUN NNS Number=Plur _ _ _ _ 37 during during ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 immune immune ADJ JJ Degree=Pos _ _ _ _ 40 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 11666 # text = We have defined the mechanisms of transactivation by NFAT1. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 defined define VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 NFAT1 NFAT1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 11667 # text = NFAT1 possesses two transactivation domains whose sequences are not conserved in the other NFAT-family proteins, and a conserved DNA-binding domain that mediates the recruitment of cooperating nuclear transcription factors even when it is expressed in the absence of other regions of the protein. 1 NFAT1 NFAT1 NUM CD NumType=Card _ _ _ _ 2 possesses possess NOUN NNS Number=Plur _ _ _ _ 3 two two NUM CD NumType=Card _ _ _ _ 4 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 5 domains domain NOUN NNS Number=Plur _ _ _ _ 6 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 7 sequences sequence NOUN NNS Number=Plur _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 conserved conserve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 other other ADJ JJ Degree=Pos _ _ _ _ 14 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 family family NOUN NN Number=Sing _ _ _ _ 17 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 binding binding VERB VBG VerbForm=Ger _ _ _ _ 25 domain domain NOUN NN Number=Sing _ _ _ _ 26 that that PRON WDT PronType=Rel _ _ _ _ 27 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 30 of of SCONJ IN _ _ _ _ _ 31 cooperating cooperate VERB VBG VerbForm=Ger _ _ _ _ 32 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 factors factor NOUN NNS Number=Plur _ _ _ _ 35 even even ADV RB _ _ _ _ _ 36 when when ADV WRB PronType=Int _ _ _ _ 37 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 38 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 absence absence NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 other other ADJ JJ Degree=Pos _ _ _ _ 45 regions region NOUN NNS Number=Plur _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 11668 # text = The activity of the NH2-terminal transactivation domain is modulated by an adjacent regulatory region that contains several conserved sequence motifs represented only in the NFAT family. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activity activity NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 NH2 Nh2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 8 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 9 domain domain NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 modulated modulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 15 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 16 region region NOUN NN Number=Sing _ _ _ _ 17 that that PRON WDT PronType=Rel _ _ _ _ 18 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 several several ADJ JJ Degree=Pos _ _ _ _ 20 conserved conserved ADJ JJ Degree=Pos _ _ _ _ 21 sequence sequence NOUN NN Number=Sing _ _ _ _ 22 motifs motif NOUN NNS Number=Plur _ _ _ _ 23 represented represent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 only only ADV RB _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 NFAT NFAT ADJ JJ Degree=Pos _ _ _ _ 28 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 11669 # text = Our results emphasize the multiple levels at which NFAT-dependent transactivation is regulated, and predict significant differences in the architecture of cooperative transcription complexes containing different NFAT-family proteins. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 emphasize emphasize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 at at ADP IN _ _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 NFAT NFAT ADV RB _ _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 predict predict VERB VB VerbForm=Inf _ _ _ _ 18 significant significant ADJ JJ Degree=Pos _ _ _ _ 19 differences difference NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 architecture architecture NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 cooperative cooperative ADJ JJ Degree=Pos _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 complexes complex NOUN NNS Number=Plur _ _ _ _ 27 containing contain VERB VBG VerbForm=Ger _ _ _ _ 28 different different ADJ JJ Degree=Pos _ _ _ _ 29 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 family family NOUN NN Number=Sing _ _ _ _ 32 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11670 # text = Document 0030012661 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012661 0030012661 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11671 # text = Inhibition of transcription factor Stat1 activity in mononuclear cell cultures and T cells by the cyclic AMP signaling pathway. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 Stat1 Stat1 NUM CD NumType=Card _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 cultures culture NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 T t ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 cyclic cyclic ADJ JJ Degree=Pos _ _ _ _ 17 AMP Amp NOUN NN Number=Sing _ _ _ _ 18 signaling signaling NOUN NN Number=Sing _ _ _ _ 19 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11672 # text = Activation of T cells results in a cascade of gene activation and subsequent proliferation and differentiation into effector phenotypes. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 cascade cascade NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 14 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 17 into into ADP IN _ _ _ _ _ 18 effector effector NOUN NN Number=Sing _ _ _ _ 19 phenotypes phenotype NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 11673 # text = The regulation of transcription factors belonging to the signal transducer and activator of transcription (STAT) family was analyzed in PHA-activated mononuclear cells and in purified T cells activated by cross-linking cell surface CD3. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 factors factor NOUN NNS Number=Plur _ _ _ _ 6 belonging belong VERB VBG VerbForm=Ger _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 signal signal NOUN NN Number=Sing _ _ _ _ 10 transducer transducer NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 activator activator NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 STAT STAT NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 family family NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 PHA PHA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 purified purify ADJ JJ Degree=Pos _ _ _ _ 30 T t PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 -linking -link NOUN NN Number=Sing _ _ _ _ 36 cell cell NOUN NN Number=Sing _ _ _ _ 37 surface surface NOUN NN Number=Sing _ _ _ _ 38 CD3 CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 11674 # text = Cell activation resulted in a delayed induction of STAT DNA-binding activity, which was sustained for several days, was composed predominantly of Stat1 and Stat3, and was blocked by cycloheximide and actinomycin D. 1 Cell cell NOUN NN Number=Sing _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 delayed delayed ADJ JJ Degree=Pos _ _ _ _ 7 induction induction NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 STAT STAT PROPN NNP Number=Sing _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 sustained sustain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 several several ADJ JJ Degree=Pos _ _ _ _ 20 days day NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 predominantly predominantly ADV RB _ _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 Stat1 stat1 NUM CD NumType=Card _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 Stat3 Stat3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 32 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 by by ADP IN _ _ _ _ _ 34 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 actinomycin actinomycin VERB VB VerbForm=Inf _ _ _ _ 37 D. D. PROPN NNP Number=Sing _ _ _ _ # sent_id = 11675 # text = Increased Stat1 and Stat3 mRNA and protein levels were detected, respectively 4 and 24 h after activation. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 Stat1 Stat1 PROPN NNP Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 Stat3 Stat3 NUM CD NumType=Card _ _ _ _ 5 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 respectively respectively ADV RB _ _ _ _ _ 13 4 4 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 24 24 NUM CD NumType=Card _ _ _ _ 16 h h NOUN NN Number=Sing _ _ _ _ 17 after after ADP IN _ _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 11676 # text = Stimulation of the cAMP signal transduction pathway, which skews cytokine production toward a Th2 pattern, resulted in the preferential suppression of Stat1 activity. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 cAMP camp NOUN NN Number=Sing _ _ _ _ 5 signal signal NOUN NN Number=Sing _ _ _ _ 6 transduction transduction NOUN NN Number=Sing _ _ _ _ 7 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 which which PRON WDT PronType=Rel _ _ _ _ 10 skews skews VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 12 production production NOUN NN Number=Sing _ _ _ _ 13 toward toward ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 Th2 Th2 NUM CD NumType=Card _ _ _ _ 16 pattern pattern NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 preferential preferential ADJ JJ Degree=Pos _ _ _ _ 22 suppression suppression NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 Stat1 Stat1 NUM CD NumType=Card _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11677 # text = cAMP inhibited the induction of expression of IL-2 receptor components, but did not inhibit IL-4 receptor alpha-chain and CD69 expression or the induction of activator protein 1 transcription factors. 1 cAMP camp NOUN NN Number=Sing _ _ _ _ 2 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 induction induction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 components component NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ _ 17 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 18 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 4 4 NUM CD NumType=Card _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ _ 22 alpha- alpha- SYM SYM _ _ _ _ SpaceAfter=No 23 chain chain NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 CD69 Cd69 NOUN NN Number=Sing _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 induction induction NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 activator activator NOUN NN Number=Sing _ _ _ _ 32 protein protein NOUN NN Number=Sing _ _ _ _ 33 1 1 NUM CD NumType=Card _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ _ 35 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 11678 # text = cAMP signaling inhibited Stat1 at several different levels, including suppression of DNA binding and down-regulation of Stat1 protein and mRNA levels. 1 cAMP camp NOUN NN Number=Sing _ _ _ _ 2 signaling signal NOUN NN Number=Sing _ _ _ _ 3 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 Stat1 stat1 NUM CD NumType=Card _ _ _ _ 5 at at ADP IN _ _ _ _ _ 6 several several ADJ JJ Degree=Pos _ _ _ _ 7 different different ADJ JJ Degree=Pos _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 including include VERB VBG VerbForm=Ger _ _ _ _ 11 suppression suppression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 DNA dna NOUN NN Number=Sing _ _ _ _ 14 binding binding NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 down down NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 regulation regulation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 Stat1 stat1 NUM CD NumType=Card _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 24 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 11679 # text = Our results demonstrate the regulation of STAT activity by a signaling pathway that regulates the T cell functional phenotype and is distinct from the cytokine-activated Janus kinase-STAT signaling pathway. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 regulation regulation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 signaling signaling NOUN NN Number=Sing _ _ _ _ 12 pathway pathway NOUN NN Number=Sing _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 T T PROPN NNP Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 functional functional ADJ JJ Degree=Pos _ _ _ _ 19 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 Janus Janus PROPN NNP Number=Sing _ _ _ _ 29 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 STAT Stat NOUN NN Number=Sing _ _ _ _ 32 signaling signaling NOUN NN Number=Sing _ _ _ _ 33 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11680 # text = Document 0030012663 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012663 0030012663 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11681 # text = Neutrophil maturation and the role of retinoic acid. 1 Neutrophil Neutrophil ADJ JJ Degree=Pos _ _ _ _ 2 maturation maturation NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 8 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11682 # text = Neutrophil maturation occurs in well defined morphological stages that correlate with the acquisition of molecular markers associated with neutrophil function. 1 Neutrophil Neutrophil ADJ JJ Degree=Pos _ _ _ _ 2 maturation maturation NOUN NN Number=Sing _ _ _ _ 3 occurs occur NOUN NNS Number=Plur _ _ _ _ 4 in in ADV RB _ _ _ _ _ 5 well well ADV RB Degree=Pos _ _ _ _ 6 defined define VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 morphological morphological ADJ JJ Degree=Pos _ _ _ _ 8 stages stage NOUN NNS Number=Plur _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 correlate correlate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 acquisition acquisition NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 16 markers marker NOUN NNS Number=Plur _ _ _ _ 17 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 20 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 11683 # text = A variety of factors are known to play a role in terminal neutrophil maturation, including the vitamin A derivative, retinoic acid. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 variety variety NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 factors factor NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 play play VERB VB VerbForm=Inf _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 role role NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 13 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 14 maturation maturation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 including include VERB VBG VerbForm=Ger _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 vitamin vitamin NOUN NN Number=Sing _ _ _ _ 19 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 derivative derivative NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 23 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 11684 # text = Retinoic acid can directly modulate gene expression via binding to its nuclear receptors, which can, in turn, activate transcription of target genes. 1 Retinoic Retinoic ADJ JJ Degree=Pos _ _ _ _ 2 acid acid NOUN NN Number=Sing _ _ _ _ 3 can can AUX MD VerbForm=Fin _ _ _ _ 4 directly directly ADV RB _ _ _ _ _ 5 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 via via NOUN NN Number=Sing _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 turn turn NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 activate activate ADJ JJ Degree=Pos _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 target target NOUN NN Number=Sing _ _ _ _ 25 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11685 # text = A role for retinoic acid during neutrophil maturation has been suggested from a variety of sources. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 5 acid acid NOUN NN Number=Sing _ _ _ _ 6 during during ADP IN _ _ _ _ _ 7 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 8 maturation maturation NOUN NN Number=Sing _ _ _ _ 9 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 11 suggested suggest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 variety variety NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 sources source NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 11686 # text = Here we present a review of the mechanism of retinoic acid receptor action and the major evidence showing that normal retinoid signaling is required for neutrophil maturation. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 present present VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 review review NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 11 acid acid ADJ JJ Degree=Pos _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 action action NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 major major ADJ JJ Degree=Pos _ _ _ _ 17 evidence evidence NOUN NN Number=Sing _ _ _ _ 18 showing show VERB VBG VerbForm=Ger _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 normal normal ADJ JJ Degree=Pos _ _ _ _ 21 retinoid retinoid NOUN NN Number=Sing _ _ _ _ 22 signaling signaling NOUN NN Number=Sing _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 27 maturation maturation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11687 # text = Document 0030012665 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012665 0030012665 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11688 # text = Activation protein 1-dependent transcriptional activation of interleukin 2 gene by Ca2+/calmodulin kinase type IV/Gr. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT : _ _ _ _ SpaceAfter=No 5 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 interleukin interleukin ADJ JJ Degree=Pos _ _ _ _ 10 2 2 NUM CD NumType=Card _ _ _ _ 11 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 Ca2+/ ca2+/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 calmodulin calmodulin NOUN NN Number=Sing _ _ _ _ 15 kinase kinase NOUN NN Number=Sing _ _ _ _ 16 type type NOUN NN Number=Sing _ _ _ _ 17 IV iv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 / / PUNCT , _ _ _ _ SpaceAfter=No 19 Gr Gr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11689 # text = The Ca2+/calmodulin-dependent protein kinase (CaMK) type IV/Gr is selectively expressed in T lymphocytes and is activated after signaling via the T cell antigen receptor (TCR), indicating that it mediates some of the Ca(2+)-dependent transcriptional events that follow TCR engagement. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 +/calmodulin-dependent +/calmodulin-dependent ADJ JJ Degree=Pos _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 CaMK CaMK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 type type NOUN NN Number=Sing _ _ _ _ 10 IV iv NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 Gr Gr PROPN NNP Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 selectively selectively ADV RB _ _ _ _ _ 15 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 after after SCONJ IN _ _ _ _ _ 23 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 24 via via ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 T T PROPN NNP Number=Sing _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 antigen antigen NUM CD NumType=Card _ _ _ _ 29 receptor receptor NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 TCR TCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 35 that that SCONJ IN _ _ _ _ _ 36 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 37 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 some some DET DT _ _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 Ca ca NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 +) +) SYM NFP _ _ _ _ SpaceAfter=No 45 - - SYM SYM _ _ _ _ SpaceAfter=No 46 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 47 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 48 events event NOUN NNS Number=Plur _ _ _ _ 49 that that PRON WDT PronType=Rel _ _ _ _ 50 follow follow VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 51 TCR Tcr ADJ JJ Degree=Pos _ _ _ _ 52 engagement engagement NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 11690 # text = Here we show that CaMKIV/Gr induces the transcription factor activation protein 1 (AP-1) alone or in synergy with T cell mitogens and with the p21ras oncoprotein. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 CaMKIV CaMKIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 / / PUNCT , _ _ _ _ SpaceAfter=No 7 Gr Gr PROPN NNP Number=Sing _ _ _ _ 8 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 1 1 NUM CD NumType=Card _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 X LS _ _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 alone alone ADJ JJ Degree=Pos _ _ _ _ 21 or or CCONJ CC _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 synergy synergy NOUN NN Number=Sing _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 mitogens mitogen NOUN NNS Number=Plur _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 p21ras p21ra NOUN NNS Number=Plur _ _ _ _ 32 oncoprotein oncoprotein ADV WRB PronType=Rel _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 11691 # text = CaMKIV/ 1 CaMKIV CaMKIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 / / PUNCT , _ _ _ _ _ # sent_id = 11692 # text = Gr signaling is associated with transcriptional activation of c-fos but is independent of p21ras or calcineurin. 1 Gr Gr NOUN NN Number=Sing _ _ _ _ 2 signaling signaling NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 fos fo NOUN NNS Number=Plur _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 independent independent ADJ JJ Degree=Pos _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 p21ras p21ras NOUN NNS Number=Plur _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 11693 # text = AP-1 is an integral component of the nuclear factor of activated T cells (NFAT) transcriptional complex, which is required for interleukin 2 gene expression in T cells. 1 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 integral integral ADJ JJ Degree=Pos _ _ _ _ 7 component component NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 T T PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 20 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 for for ADP IN _ _ _ _ _ 26 interleukin interleukin ADV RB _ _ _ _ _ 27 2 2 NUM CD NumType=Card _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 11694 # text = We demonstrate that CaMKIV/Gr reconstitutes the capacity of the cytosolic component of NFAT to direct transcription from NFAT sites in non-T cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 CaMKIV CaMKIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 / / PUNCT , _ _ _ _ SpaceAfter=No 6 Gr Gr PROPN NNP Number=Sing _ _ _ _ 7 reconstitutes reconstitute VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 capacity capacity NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 13 component component NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 direct direct VERB VB VerbForm=Inf _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 21 sites site NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 no no DET DT _ _ _ _ SpaceAfter=No 24 n-T n-t ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11695 # text = These results reveal a central role for CaMKIV/Gr as a Ca(2+)-regulated activator of gene transcription in T lymphocytes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 reveal reveal VERB VB VerbForm=Inf _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 central central ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 CaMKIV CaMKIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 / / PUNCT , _ _ _ _ SpaceAfter=No 10 Gr Gr PROPN NNP Number=Sing _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 Ca ca NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 +) +) SYM NFP _ _ _ _ SpaceAfter=No 17 - - SYM SYM _ _ _ _ SpaceAfter=No 18 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 activator activator NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11696 # text = Document 0030012670 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012670 0030012670 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11697 # text = Transactivation of the interleukin-1alpha promoter by human T-cell leukemia virus type I and type II Tax proteins. 1 Transactivation Transactivation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 interleukin interleukin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 alpha alpha NOUN NN Number=Sing _ _ _ _ 7 promoter promoter NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 13 virus virus NOUN NN Number=Sing _ _ _ _ 14 type type NOUN NN Number=Sing _ _ _ _ 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 type type VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 II ii NUM CD NumType=Card _ _ _ _ 19 Tax tax NOUN NN Number=Sing _ _ _ _ 20 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11698 # text = Human T-cell leukemia virus type I (HTLV-I)-infected T-cell lines constitutively produce high levels of interleukin-1alpha (IL-1alpha). 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 type type NOUN NN Number=Sing _ _ _ _ 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 - - PUNCT : _ _ _ _ SpaceAfter=No 14 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 lines line NOUN NNS Number=Plur _ _ _ _ 18 constitutively constitutively ADV RB _ _ _ _ _ 19 produce produce VERB VB VerbForm=Inf _ _ _ _ 20 high high ADJ JJ Degree=Pos _ _ _ _ 21 levels level NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 interleukin interleukin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 alpha alpha NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11699 # text = To analyze the mechanisms that lead to the expression of IL-1alpha in HTLV-I-infected cell lines, we studied regulatory regions of the human IL-1alpha promoter involved in activation of the IL-1alpha gene. 1 To to PART TO _ _ _ _ _ 2 analyze analyze VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 lead lead VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 24 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 26 regions region NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 alpha alpha NOUN NN Number=Sing _ _ _ _ 33 promoter promoter NOUN NN Number=Sing _ _ _ _ 34 involved involved VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 activation activation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 alpha alpha NOUN NN Number=Sing _ _ _ _ 42 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 11700 # text = IL-1alpha promoter constructs drive transcription of the chloramphenicol acetyltransferase (CAT) reporter gene in HTLV-I-positive MT-2 cells, which constitutively produce IL-1alpha. 1 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 alpha alpha NOUN NN Number=Sing _ _ _ _ 4 promoter promoter NOUN NN Number=Sing _ _ _ _ 5 constructs construct NOUN NNS Number=Plur _ _ _ _ 6 drive drive VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 11 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 CAT Cat NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 reporter reporter NOUN NN Number=Sing _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 positive positive ADJ JJ Degree=Pos _ _ _ _ 23 MT mt NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 which which PRON WDT PronType=Rel _ _ _ _ 29 constitutively constitutively ADV RB _ _ _ _ _ 30 produce produce VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 IL il ADV RB _ _ _ _ SpaceAfter=No 32 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 11701 # text = In a cotransfection assay, the Tax protein of both HTLV-I and HTLV-II specifically activated transcription from the IL-1alpha promoter in an uninfected Jurkat cell line. 1 In in ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 cotransfection cotransfection NOUN NN Number=Sing _ _ _ _ 4 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 Tax tax NOUN NN Number=Sing _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 both both DET DT _ _ _ _ _ 11 HTLV HTLV NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 II II PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 specifically specifically ADV RB _ _ _ _ _ 19 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 alpha alpha NOUN NN Number=Sing _ _ _ _ 26 promoter promoter NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 uninfected uninfected ADJ JJ Degree=Pos _ _ _ _ 30 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 11702 # text = A mutant Tax protein deficient in transactivation of genes by the nuclear factor (NF)-kappaB pathway was unable to induce transcriptional activity of IL-1alpha promoter-CAT constructs, but was rescued by exogenous provision of p65/p50 NF-kappaB. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 3 Tax tax NOUN NN Number=Sing _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 deficient deficient NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 genes gene NOUN NNS Number=Plur _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 - - PUNCT : _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 19 pathway pathway NOUN NN Number=Sing _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 unable unable ADJ JJ Degree=Pos _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 induce induce VERB VB VerbForm=Inf _ _ _ _ 24 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 -1alpha -1alpha NOUN NN Number=Sing _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 CAT Cat NOUN NN Number=Sing _ _ _ _ 32 constructs construct NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 but but CCONJ CC _ _ _ _ _ 35 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 36 rescued rescue VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 by by ADP IN _ _ _ _ _ 38 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 39 provision provision NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 p65/p50 p65/p50 NUM CD NumType=Card _ _ _ _ 42 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 11703 # text = We found that two IL-1alpha kappaB-like sites (positions -1,065 to -1,056 and +646 to +655) specifically formed a complex with NF-kappaB-containing nuclear extract from MT-2 cells and that NF-kappaB bound with higher affinity to the 3' NF-kappaB binding site than to the 5' NF-kappaB site. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 two two NUM CD NumType=Card _ _ _ _ 5 IL IL NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 like like SCONJ IN _ _ _ _ _ 11 sites site NOUN NNS Number=Plur _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 positions position NOUN NNS Number=Plur _ _ _ _ 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1,065 1,065 NUM CD NumType=Card _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 -1,056 -1,056 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 +646 +646 NUM CD NumType=Card _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 +655 +655 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 specifically specifically ADV RB _ _ _ _ _ 24 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 complex complex NOUN NN Number=Sing _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 containing contain VERB VBG VerbForm=Ger _ _ _ _ 33 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 34 extract extract NOUN NN Number=Sing _ _ _ _ 35 from from ADP IN _ _ _ _ _ 36 MT mt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 2 2 NUM CD NumType=Card _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 that that SCONJ IN _ _ _ _ _ 42 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 45 bound bound ADJ JJ Degree=Pos _ _ _ _ 46 with with ADP IN _ _ _ _ _ 47 higher higher ADJ JJR Degree=Cmp _ _ _ _ 48 affinity affinity NOUN NN Number=Sing _ _ _ _ 49 to to ADP IN _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 52 ' ' PUNCT `` _ _ _ _ _ 53 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 56 binding binding VERB VBG VerbForm=Ger _ _ _ _ 57 site site NOUN NN Number=Sing _ _ _ _ 58 than than ADP IN _ _ _ _ _ 59 to to ADP IN _ _ _ _ _ 60 the the DET DT Definite=Def|PronType=Art _ _ _ _ 61 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 62 ' 's NOUN NN Number=Sing _ _ _ _ 63 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 64 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 65 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 66 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 67 . . PUNCT . _ _ _ _ _ # sent_id = 11704 # text = Moreover, deletion of either 5' or 3' NF-kappaB sites reduced IL-1alpha promoter activity in MT-2 cells and transactivation of the IL-1alpha promoter by exogenous NF-kappaB and Tax in Jurkat cells. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 deletion deletion NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 either either CCONJ CC _ _ _ _ _ 6 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ' ' NOUN NNS Number=Plur _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ' ' PUNCT `` _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 14 sites site NOUN NNS Number=Plur _ _ _ _ 15 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 IL IL ADV RB _ _ _ _ SpaceAfter=No 17 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 alpha alpha NOUN NN Number=Sing _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 MT mt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 alpha alpha NOUN NN Number=Sing _ _ _ _ 33 promoter promoter NOUN NN Number=Sing _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 36 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 Tax tax PROPN NNP Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 11705 # text = These data suggest a general role for Tax induction of IL-1alpha gene transcription by the NF-kappaB pathway. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 general general ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 Tax tax NOUN NN Number=Sing _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 11706 # text = Expression of IL-1alpha by HTLV-I productively infected cells may be important in the hypercalcemia, osteolytic bone lesions, neutrophilia, elevation of C-reactive protein, and fever frequently seen in patients with HTLV-I-induced adult T-cell leukemia/lymphoma. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 alpha alpha NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 productively productively ADV RB _ _ _ _ _ 11 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 may may AUX MD VerbForm=Fin _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 important important ADJ JJ Degree=Pos _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 hypercalcemia hypercalcemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 osteolytic osteolytic ADJ JJ Degree=Pos _ _ _ _ 21 bone bone NOUN NN Number=Sing _ _ _ _ 22 lesions lesion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 neutrophilia neutrophilia NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 elevation elevation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 C- C- SYM NFP _ _ _ _ SpaceAfter=No 29 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 30 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 fever fever ADV RB _ _ _ _ _ 34 frequently frequently ADV RB _ _ _ _ _ 35 seen see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 patients patient NOUN NN Number=Sing _ _ _ _ 38 with with ADP IN _ _ _ _ _ 39 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 adult adult NOUN NN Number=Sing _ _ _ _ 45 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 cell cell NOUN NN Number=Sing _ _ _ _ 47 leukemia leukemion NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 / / PUNCT , _ _ _ _ SpaceAfter=No 49 lymphoma lymphoma NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11707 # text = Document 0030012679 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012679 0030012679 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11708 # text = IL-12 induces IFN regulating factor-1 (IRF-1) gene expression in human NK and T cells. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 12 12 NUM CD NumType=Card _ _ _ _ 4 induces induce NOUN NNS Number=Plur _ _ _ _ 5 IFN Ifn PROPN NNP Number=Sing _ _ _ _ 6 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 -1 -1 NUM CD NumType=Card _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 IRF IRF NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 NK NK PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11709 # text = IL-12 is a critical immunoregulatory cytokine that promotes cell-mediated immune responses and the differentiation of naive CD4+ cells to Th1 cells; however, relatively few IL-12 target genes have been identified. 1 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 12 12 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 critical critical ADJ JJ Degree=Pos _ _ _ _ 7 immunoregulatory immunoregulatory ADJ JJ Degree=Pos _ _ _ _ 8 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 promotes promote VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 cell cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 immune immune ADJ JJ Degree=Pos _ _ _ _ 15 responses response NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 naive naive ADJ JJ Degree=Pos _ _ _ _ 21 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 + + SYM SYM _ _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 Th1 Th1 NUM CD NumType=Card _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 ; ; PUNCT , _ _ _ _ _ 28 however however ADV RB _ _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 relatively relatively ADV RB _ _ _ _ _ 31 few few ADJ JJ Degree=Pos _ _ _ _ 32 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 12 12 NUM CD NumType=Card _ _ _ _ 35 target target NOUN NN Number=Sing _ _ _ _ 36 genes gene NOUN NNS Number=Plur _ _ _ _ 37 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 38 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 39 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 11710 # text = To better clarify the molecular basis of IL-12 action, we set out to characterize genes up-regulated by IL-12, first by contrasting IL-12- and IFN-alpha-inducible genes. 1 To to ADP IN _ _ _ _ _ 2 better better ADJ JJR Degree=Cmp _ _ _ _ 3 clarify clarify NOUN NN Number=Sing _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 6 basis basis NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 12 12 NUM CD NumType=Card _ _ _ _ 11 action action NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 set set VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 out out ADP RP _ _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 characterize characterize VERB VB VerbForm=Inf _ _ _ _ 18 genes gene NOUN NNS Number=Plur _ _ _ _ 19 up up ADV RB _ _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 first first ADV RB _ _ _ _ _ 28 by by SCONJ IN _ _ _ _ _ 29 contrasting contraste VERB VBG VerbForm=Ger _ _ _ _ 30 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 40 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 11711 # text = We identified several genes up-regulated by IL-12, namely, MIP-1alpha, MIP-1beta, IL-1RA, and IFN regulatory factor-1 (IRF-1). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 several several ADJ JJ Degree=Pos _ _ _ _ 4 genes gene NOUN NNS Number=Plur _ _ _ _ 5 up up ADP IN _ _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 namely namely ADV RB _ _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 MIP Mip PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 MIP Mip PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 RA Ra NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 IFN Ifn ADP IN _ _ _ _ _ 30 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 31 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 -1 -1 NUM CD NumType=Card _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 IRF IRF NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 11712 # text = IRF-1 is a transcription factor regulated by IFNs that is also essential for Th1 responses. 1 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ _ 8 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 IFNs IFNs NOUN NNS Number=Plur _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 also also ADV RB _ _ _ _ _ 14 essential essential ADJ JJ Degree=Pos _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 Th1 Th1 NUM CD NumType=Card _ _ _ _ 17 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 11713 # text = We demonstrated that IL-12 directly up-regulates IRF-1 to the same extent as IFN-alpha in normal human T cells and in NK cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 12 12 NUM CD NumType=Card _ _ _ _ 7 directly directly ADV RB _ _ _ _ _ 8 up up ADV RB _ _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 regulates regulate VERB NNS Number=Plur _ _ _ _ 11 IRF IRF NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 same same ADJ JJ Degree=Pos _ _ _ _ 17 extent extent NOUN NN Number=Sing _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 IFN Ifn ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 alpha alpha NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 normal normal ADJ JJ Degree=Pos _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 NK NK PROPN NNP Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11714 # text = We showed that IL-12 had a direct effect on IRF-1, an effect not mediated indirectly by the induction of IFN-gamma production. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - SYM SYM _ _ _ _ SpaceAfter=No 6 12 12 NUM CD NumType=Card _ _ _ _ 7 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 direct direct ADJ JJ Degree=Pos _ _ _ _ 10 effect effect NOUN NN Number=Sing _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 effect effect NOUN NN Number=Sing _ _ _ _ 18 not not ADV RB _ _ _ _ _ 19 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 indirectly indirectly ADV RB _ _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 induction induction NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 gamma gamma NOUN NN Number=Sing _ _ _ _ 28 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 11715 # text = Furthermore, IL-2 and IL-12 synergistically induced IRF-1, whereas IFN-alpha and IL-12 did not. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - SYM SYM _ _ _ _ SpaceAfter=No 9 12 12 NUM CD NumType=Card _ _ _ _ 10 synergistically synergistically ADV RB _ _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 IRF IRF NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 whereas whereas SCONJ IN _ _ _ _ _ 17 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 alpha alpha PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 12 12 NUM CD NumType=Card _ _ _ _ 24 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 not not PART RB _ _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11716 # text = The participation of STAT4 in the regulation of IRF-1 was demonstrated in two ways. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 participation participation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 STAT4 STAT4 NUM CD NumType=Card _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 regulation regulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 two two NUM CD NumType=Card _ _ _ _ 16 ways way NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 11717 # text = First, STAT4 was required for the IL-12-dependent transactivation of an IRF-1 reporter construct, and second, STAT4 binding to the IRF-1 promoter was shown using EMSA. 1 First first ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 STAT4 STAT4 PROPN NNP Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 IL- Il- SYM SYM _ _ _ _ SpaceAfter=No 9 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 IRF IRF NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 reporter reporter NOUN NN Number=Sing _ _ _ _ 19 construct construct NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 second second ADV RB _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 STAT4 STAT4 PROPN NNP Number=Sing _ _ _ _ 25 binding bind VERB VBG VerbForm=Ger _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 promoter promoter NOUN NN Number=Sing _ _ _ _ 32 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 33 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 34 using use VERB VBG VerbForm=Ger _ _ _ _ 35 EMSA EMSA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 11718 # text = In contrast to IL-12, no up-regulation of IRF-1 was found in IL-4-stimulated cells, and IL-4 did not block IL-12-dependent up-regulation of IRF-1. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 no no DET DT _ _ _ _ _ 9 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 regulation regulation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - SYM SYM _ _ _ _ SpaceAfter=No 29 4 4 NUM CD NumType=Card _ _ _ _ 30 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 not not PART RB _ _ _ _ _ 32 block block VERB VB VerbForm=Inf _ _ _ _ 33 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 38 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 regulation regulation NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 11719 # text = Therefore, IRF-1 may be an important contributor to IL-12 signaling, and we speculate that the defective IL-12 responses seen in IRF-1-/- mice might be attributable, in part, to the absence of this transcription factor. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 may may AUX MD VerbForm=Fin _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 important important ADJ JJ Degree=Pos _ _ _ _ 10 contributor contributor NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 12 12 NUM CD NumType=Card _ _ _ _ 15 signaling signaling NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 19 speculate speculate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 defective defective ADJ JJ Degree=Pos _ _ _ _ 23 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 12 12 NUM CD NumType=Card _ _ _ _ 26 responses response NOUN NNS Number=Plur _ _ _ _ 27 seen see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 IRF IRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 -/- -/- PUNCT . _ _ _ _ _ 33 mice mouse NOUN NNS Number=Plur _ _ _ _ 34 might might AUX MD VerbForm=Fin _ _ _ _ 35 be be AUX VB VerbForm=Inf _ _ _ _ 36 attributable attributable ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 part part NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 to to ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 absence absence NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 46 transcription transcription NOUN NN Number=Sing _ _ _ _ 47 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11720 # text = Document 0030012688 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012688 0030012688 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11721 # text = USF-related transcription factor, HIV-TF1, stimulates transcription of human immunodeficiency virus-1. 1 USF USF ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 related related ADJ JJ Degree=Pos _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 TF1 TF1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11722 # text = The transcription factor HIV-TF1, which binds to a region about 60 bp upstream from the enhancer of the human immunodeficiency virus-1 (HIV-1), was purified from human B cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 HIV- HIV- PUNCT : _ _ _ _ SpaceAfter=No 5 TF1 tF1 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 region region NOUN NN Number=Sing _ _ _ _ 12 about about ADP IN _ _ _ _ _ 13 60 60 NUM CD NumType=Card _ _ _ _ 14 bp bp NOUN NN Number=Sing _ _ _ _ 15 upstream upstream NOUN NN Number=Sing _ _ _ _ 16 from from ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 23 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 33 purified purify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 34 from from ADP IN _ _ _ _ _ 35 human human ADJ JJ Degree=Pos _ _ _ _ 36 B b NOUN NN Number=Sing _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 11723 # text = HIV-TF1 had a molecular weight of 39,000. 1 HIV Hiv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 TF1 tF1 PROPN NNP Number=Sing _ _ _ _ 4 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 7 weight weight NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 39,000 39,000 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 11724 # text = Binding of HIV-TF1 to the HIV long terminal repeat (LTR) activated transcription from the HIV promoter in vitro. 1 Binding binding NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 TF1 TF1 PROPN NNP Number=Sing _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 HIV HIV PROPN NNP Number=Sing _ _ _ _ 9 long long ADJ JJ Degree=Pos _ _ _ _ 10 terminal terminal NOUN NN Number=Sing _ _ _ _ 11 repeat repeat NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 HIV HIV PROPN NNP Number=Sing _ _ _ _ 20 promoter promoter NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 11725 # text = The HIV-TF1-binding site in HIV LTR was similar to the site recognized by upstream stimulatory factor (USF) in the adenovirus major late promoter. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 TF TF NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 site site NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 HIV HIV PROPN NNP Number=Sing _ _ _ _ 11 LTR LTR PROPN NNP Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 similar similar ADJ JJ Degree=Pos _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 site site NOUN NN Number=Sing _ _ _ _ 17 recognized recognize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 20 stimulatory stimulatory ADJ JJ Degree=Pos _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 USF USF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 adenovirus adenovirus NOUN NN Number=Sing _ _ _ _ 28 major major ADJ JJ Degree=Pos _ _ _ _ 29 late late ADJ JJ Degree=Pos _ _ _ _ 30 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11726 # text = DNA-binding properties of HIV-TF1 suggested that HIV-TF1 might be identical or related to USF. 1 DNA- DNA- SYM NFP _ _ _ _ SpaceAfter=No 2 binding bind VERB VBG VerbForm=Ger _ _ _ _ 3 properties property NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 TF1 TF1 PROPN NNP Number=Sing _ _ _ _ 8 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 TF1 TF1 PROPN NNP Number=Sing _ _ _ _ 13 might might AUX MD VerbForm=Fin _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 identical identical ADJ JJ Degree=Pos _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 related related ADJ JJ Degree=Pos _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 USF USF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 11727 # text = Interestingly, treatment of purified HIV-TF1 by phosphatase greatly reduced its DNA-binding activity, suggesting that phosphorylation of HIV-TF1 was essential for DNA binding. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 treatment treatment NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 TF1 tF1 NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 11 greatly greatly ADV RB _ _ _ _ _ 12 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 DNA DNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 20 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 21 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 TF1 TF1 PROPN NNP Number=Sing _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 essential essential ADJ JJ Degree=Pos _ _ _ _ 28 for for SCONJ IN _ _ _ _ _ 29 DNA dna NOUN NN Number=Sing _ _ _ _ 30 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11728 # text = The disruption of HIV-TF1-binding site induced a 60% decrease in the level of transcription from the HIV promoter in vivo. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 disruption disruption NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 HIV- HIV- NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 TF TF NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 site site NOUN NN Number=Sing _ _ _ _ 10 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 60 60 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 % % SYM NN Number=Sing _ _ _ _ 14 decrease decrease NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 level level NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 HIV HIV PROPN NNP Number=Sing _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11729 # text = These results suggest that HIV-TF1 is involved in transcriptional regulation of HIV-1. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 HIV Hiv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 TF1 tF1 PROPN NNP Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 involved involved ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 regulation regulation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11730 # text = Document 0030012693 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012693 0030012693 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11731 # text = An essential role for NF-kappaB in human CD34(+) bone marrow cell survival. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 essential essential ADJ JJ Degree=Pos _ _ _ _ 3 role role NOUN NN Number=Sing _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 CD34 CD34 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 +) +) SYM NFP _ _ _ _ _ 13 bone bone NOUN NN Number=Sing _ _ _ _ 14 marrow marrow NOUN NN Number=Sing _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 survival survival NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11732 # text = The transcription factor, NF-kappaB, is important for T-cell activation, B-cell maturation, and human immunodeficiency virus transcription and plays a role in alternatively mediating and protecting against apoptosis in a variety of cell types. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 important important ADJ JJ Degree=Pos _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 maturation maturation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 24 virus virus NOUN NN Number=Sing _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 role role NOUN NN Number=Sing _ _ _ _ 30 in in SCONJ IN _ _ _ _ _ 31 alternatively alternatively ADV RB _ _ _ _ _ 32 mediating mediating VERB VBG VerbForm=Ger _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 protecting protect VERB VBG VerbForm=Ger _ _ _ _ 35 against against ADP IN _ _ _ _ _ 36 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 variety variety NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 cell cell NOUN NN Number=Sing _ _ _ _ 42 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 11733 # text = However, a role for NF-kappaB in human CD34(+) bone marrow cells has not been described. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 CD34 CD34 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 +) +) SYM NFP _ _ _ _ _ 14 bone bone VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 marrow marrow ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 not not PART RB _ _ _ _ _ 19 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 20 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 11734 # text = We provide evidence here that virtually all human CD34(+) bone marrow cells express NF-kappaB that can be activated by exposure to phorbol 12-myristate 13-acetate and a variety of cytokines, eg, tumor necrosis factor alpha, interleukin-3, and granulocyte-macrophage colony-stimulating factor. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 evidence evidence NOUN NN Number=Sing _ _ _ _ 4 here here ADV RB PronType=Dem _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 virtually virtually ADV RB _ _ _ _ _ 7 all all DET DT _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 CD34 Cd34 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 +) +) PUNCT -RRB- _ _ _ _ _ 12 bone bone NOUN NN Number=Sing _ _ _ _ 13 marrow marrow NOUN NN Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 express express ADJ JJ Degree=Pos _ _ _ _ 16 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 can can AUX MD VerbForm=Fin _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 exposure exposure NOUN NN Number=Sing _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 phorbol phorbol VERB VB VerbForm=Inf _ _ _ _ 27 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 myristate myristate NOUN NN Number=Sing _ _ _ _ 30 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 acetate acetate NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 variety variety NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 eg eg X FW _ _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 tumor tumor NOUN NN Number=Sing _ _ _ _ 42 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 43 factor factor NOUN NN Number=Sing _ _ _ _ 44 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT , _ _ _ _ SpaceAfter=No 48 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 53 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 54 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 56 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 57 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 11735 # text = In addition, we demonstrate that NF-kappaB may be required for human CD34(+) bone marrow cell clonogenic function and survival. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 may may AUX MD VerbForm=Fin _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 CD34 CD34 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 +) +) SYM NFP _ _ _ _ _ 18 bone bone VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 marrow marrow ADJ JJ Degree=Pos _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 clonogenic clonogenic NOUN NN Number=Sing _ _ _ _ 22 function function NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 survival survival NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 11736 # text = These results offer insight into a new role for NF-kappaB in maintaining survival and function in hematopoietic stem and progenitor cells and suggest that proposed strategies involving inhibition of NF-kappaB activation as an adjunct to cancer chemotherapy should be approached with caution. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 offer offer VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 insight insight ADV RB _ _ _ _ _ 5 into into ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 new new ADJ JJ Degree=Pos _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 in in SCONJ IN _ _ _ _ _ 14 maintaining maintain VERB VBG VerbForm=Ger _ _ _ _ 15 survival survival NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 function function NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 20 stem stem NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 that that SCONJ IN _ _ _ _ _ 27 proposed propose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 strategies strategy NOUN NNS Number=Plur _ _ _ _ 29 involving involve VERB VBG VerbForm=Ger _ _ _ _ 30 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 35 activation activation NOUN NN Number=Sing _ _ _ _ 36 as as ADP IN _ _ _ _ _ 37 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 adjunct adjunct NOUN NN Number=Sing _ _ _ _ 39 to to ADP IN _ _ _ _ _ 40 cancer cancer NOUN NN Number=Sing _ _ _ _ 41 chemotherapy chemotherapy NOUN NN Number=Sing _ _ _ _ 42 should should AUX MD VerbForm=Fin _ _ _ _ 43 be be AUX VB VerbForm=Inf _ _ _ _ 44 approached approach VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 45 with with ADP IN _ _ _ _ _ 46 caution caution NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11737 # text = Document 0030012698 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012698 0030012698 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11738 # text = Induction of Bcl-x(L) expression by human T-cell leukemia virus type 1 Tax through NF-kappaB in apoptosis-resistant T-cell transfectants with Tax. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 x x SYM SYM _ _ _ _ SpaceAfter=No 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 L L PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 15 virus virus NOUN NN Number=Sing _ _ _ _ 16 type type NOUN NN Number=Sing _ _ _ _ 17 1 1 NUM CD NumType=Card _ _ _ _ 18 Tax tax NOUN NN Number=Sing _ _ _ _ 19 through through ADP IN _ _ _ _ _ 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 apoptosis apoptosis ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 resistant resistant NOUN NN Number=Sing _ _ _ _ 27 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 transfectants transfectant NOUN NNS Number=Plur _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11739 # text = Human T-cell leukemia virus type 1 (HTLV-1) Tax is thought to play a pivotal role in immortalization of T cells. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 type type NOUN NN Number=Sing _ _ _ _ 7 1 1 NUM CD NumType=Card _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 HTLV HTLV NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 X LS _ _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 Tax tax NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 play play VERB VB VerbForm=Inf _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 pivotal pivotal ADJ JJ Degree=Pos _ _ _ _ 20 role role NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 immortalization immortalization NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11740 # text = We have recently shown that the expression of Tax protected the mouse T-cell line CTLL-2 against apoptosis induced by interleukin-2 (IL-2) deprivation and converted its growth from being IL-2 dependent to being IL-2 independent. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 recently recently ADV RB _ _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 Tax Tax PROPN NNP Number=Sing _ _ _ _ 10 protected protect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 mouse mouse NOUN NN Number=Sing _ _ _ _ 13 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 line line NOUN NN Number=Sing _ _ _ _ 16 CTLL Ctll NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 against against ADP IN _ _ _ _ _ 20 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 21 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 deprivation deprivation NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 converted convert VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 35 growth growth NOUN NN Number=Sing _ _ _ _ 36 from from SCONJ IN _ _ _ _ _ 37 being be AUX VBG VerbForm=Ger _ _ _ _ 38 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 2 2 NUM CD NumType=Card _ _ _ _ 41 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 42 to to SCONJ IN _ _ _ _ _ 43 being be AUX VBG VerbForm=Ger _ _ _ _ 44 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 2 2 NUM CD NumType=Card _ _ _ _ 47 independent independent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 11741 # text = In this study, we demonstrate that constitutive expression of bcl-xl but not bcl-2, bcl-xs, bak, bad, or bax was associated with apoptosis resistance after IL-2 deprivation in CTLL-2 cells that expressed Tax. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 xl xl NOUN NN Number=Sing _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 xs x NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 bak bak NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 bad bad ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 bax bax NOUN NN Number=Sing _ _ _ _ 30 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 31 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 apoptosis apoptosis DET DT Number=Sing|PronType=Dem _ _ _ _ 34 resistance resistance NOUN NN Number=Sing _ _ _ _ 35 after after ADP IN _ _ _ _ _ 36 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 2 2 NUM CD NumType=Card _ _ _ _ 39 deprivation deprivation NOUN NN Number=Sing _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 CTLL CTLL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 2 2 NUM CD NumType=Card _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ _ 45 that that PRON WDT PronType=Rel _ _ _ _ 46 expressed expressed VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 11742 # text = Transient-transfection assays showed that bcl-x promoter was transactivated by wild-type Tax. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 transfection transfection NOUN NN Number=Sing _ _ _ _ 4 assays assay NOUN NNS Number=Plur _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 bcl bcl ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 x x NOUN NN Number=Sing _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 transactivated transactivate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 type type NOUN NN Number=Sing _ _ _ _ 17 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 11743 # text = Similar effects were observed in mutant Tax retaining transactivating ability through NF-kappaB. 1 Similar similar ADJ JJ Degree=Pos _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 7 Tax tax NOUN NN Number=Sing _ _ _ _ 8 retaining retain VERB VBG VerbForm=Ger _ _ _ _ 9 transactivating transactivat VERB VBG VerbForm=Ger _ _ _ _ 10 ability ability NOUN NN Number=Sing _ _ _ _ 11 through through ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB. kappaB. PROPN NNP Number=Sing _ _ _ _ # sent_id = 11744 # text = Deletion or substitution of a putative NF-kappaB binding site identified in the bcl-x promoter significantly decreased Tax-induced transactivation. 1 Deletion Deletion NOUN NN Number=Sing _ _ _ _ 2 or or CCONJ CC _ _ _ _ _ 3 substitution substitution NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 putative putative ADJ JJ Degree=Pos _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 binding binding VERB VBG VerbForm=Ger _ _ _ _ 11 site site NOUN NN Number=Sing _ _ _ _ 12 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 x x NOUN NN Number=Sing _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ _ 19 significantly significantly ADV RB _ _ _ _ _ 20 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 Tax Tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 transactivation transactivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 11745 # text = This NF-kappaB-like element was able to form a complex with NF-kappaB family proteins in vitro. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 like like ADJ JJ Degree=Pos _ _ _ _ 7 element element NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 able able ADJ JJ Degree=Pos _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 form form VERB VB VerbForm=Inf _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 complex complex NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 18 family family NOUN NN Number=Sing _ _ _ _ 19 proteins protein NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 11746 # text = Furthermore, Tax-induced transactivation of the bcl-x promoter was also diminished by the mutant IkappaBalpha, which specifically inhibits NF-kappaB activity. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Tax tax PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 x x NOUN NN Number=Sing _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 diminished diminish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 19 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 specifically specifically ADV RB _ _ _ _ _ 23 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 11747 # text = Our findings suggest that constitutive expression of Bcl-x(L) induced by Tax through the NF-kappaB pathway contributes to the inhibition of apoptosis in CTLL-2 cells after IL-2 deprivation. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 x x SYM SYM _ _ _ _ SpaceAfter=No 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 L l INTJ UH _ _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 Tax tax PROPN NNP Number=Sing _ _ _ _ 17 through through ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 22 pathway pathway NOUN NN Number=Sing _ _ _ _ 23 contributes contribute NOUN NNS Number=Plur _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 CTLL CTLL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 2 2 NUM CD NumType=Card _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ _ 34 after after ADP IN _ _ _ _ _ 35 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 2 2 NUM CD NumType=Card _ _ _ _ 38 deprivation deprivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11748 # text = Document 0030012699 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012699 0030012699 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11749 # text = Reactivation of Kaposi's sarcoma-associated herpesvirus infection from latency by expression of the ORF 50 transactivator, a homolog of the EBV R protein. 1 Reactivation Reactivation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 Kaposi Kaposi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 's 's PART POS _ _ _ _ _ 5 sarcoma sarcoma NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 herpesvirus herpesvirus NOUN NN Number=Sing _ _ _ _ 9 infection infection NOUN NN Number=Sing _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 latency latency NOUN NN Number=Sing _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 ORF ORF PROPN NNP Number=Sing _ _ _ _ 17 50 50 NUM CD NumType=Card _ _ _ _ 18 transactivator transactivator NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 homolog homolog NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 EBV EBV PROPN NNP Number=Sing _ _ _ _ 25 R R PROPN NNP Number=Sing _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11750 # text = Kaposi's sarcoma (KS)-associated herpesvirus (KSHV), or human herpesvirus 8, is a lymphotropic virus strongly linked to several AIDS-related neoplasms. 1 Kaposi Kaposi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 's 's PART POS _ _ _ _ _ 3 sarcoma sarcoma PROPN NNP Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 KS KS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 7 - - PUNCT : _ _ _ _ SpaceAfter=No 8 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 herpesvirus herpesvirus NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 KSHV KSHV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 herpesvirus herpesvirus NOUN NN Number=Sing _ _ _ _ 17 8 8 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 lymphotropic lymphotropic ADJ JJ Degree=Pos _ _ _ _ 22 virus virus NOUN NN Number=Sing _ _ _ _ 23 strongly strongly ADV RB _ _ _ _ _ 24 linked link VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 several several ADJ JJ Degree=Pos _ _ _ _ 27 AIDS aids NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 related related ADJ JJ Degree=Pos _ _ _ _ 30 neoplasms neoplasm NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11751 # text = The primary reservoir of infection consists of latently infected B lymphocytes and possibly other mononuclear cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 primary primary ADJ JJ Degree=Pos _ _ _ _ 3 reservoir reservoir NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 infection infection NOUN NN Number=Sing _ _ _ _ 6 consists consist NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 latently latently ADV RB _ _ _ _ _ 9 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 possibly possibly ADV RB _ _ _ _ _ 14 other other ADJ JJ Degree=Pos _ _ _ _ 15 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 11752 # text = Viral reactivation from latency and spread from this lymphoid reservoir is presumably required for development of nonlymphoid tumors like KS. 1 Viral viral ADJ JJ Degree=Pos _ _ _ _ 2 reactivation reactivation NOUN NN Number=Sing _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 latency latency NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 spread spread VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 9 lymphoid lymphoid NOUN NN Number=Sing _ _ _ _ 10 reservoir reservoir NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 presumably presumably ADV RB _ _ _ _ _ 13 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 development development NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 nonlymphoid nonlymphoid ADJ JJ Degree=Pos _ _ _ _ 18 tumors tumor NOUN NNS Number=Plur _ _ _ _ 19 like like ADP IN _ _ _ _ _ 20 KS KS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 11753 # text = Here we show that deregulated expression of a single viral gene, ORF 50, which encodes a transactivator able to selectively upregulate delayed-early viral genes, suffices to disrupt latency and induce the lytic gene cascade in latently infected B cells. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 deregulated deregulated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 single single ADJ JJ Degree=Pos _ _ _ _ 10 viral viral ADJ JJ Degree=Pos _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 ORF ORF PROPN NNP Number=Sing _ _ _ _ 14 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 which which PRON WDT PronType=Rel _ _ _ _ 17 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 transactivator transactivator NOUN NN Number=Sing _ _ _ _ 20 able able ADJ JJ Degree=Pos _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 selectively selectively ADV RB _ _ _ _ _ 23 upregulate upregulate VERB VB VerbForm=Inf _ _ _ _ 24 delayed delayed ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 early early ADJ JJ Degree=Pos _ _ _ _ 27 viral viral ADJ JJ Degree=Pos _ _ _ _ 28 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 suffices suffice NOUN NNS Number=Plur _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 disrupt disrupt VERB VB VerbForm=Inf _ _ _ _ 33 latency latency NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 induce induce VERB VB VerbForm=Inf _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 lytic lytic ADJ JJ Degree=Pos _ _ _ _ 38 gene gene NOUN NN Number=Sing _ _ _ _ 39 cascade cascade NOUN NN Number=Sing _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 latently latently ADV RB _ _ _ _ _ 42 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 B b ADJ JJ Degree=Pos _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 11754 # text = The identification of this gene opens the way to studies of the physiologic mechanisms controlling reactvation of KSHV from latency. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 identification identification NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 opens open VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 way way NOUN NN Number=Sing _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 studies study NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 physiologic physiologic NOUN NN Number=Sing _ _ _ _ 14 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 15 controlling controlle VERB VBG VerbForm=Ger _ _ _ _ 16 reactvation reactvation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 KSHV KSHV PROPN NNP Number=Sing _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 latency latency NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 11755 # text = Copyright 1998 Academic Press. 1 Copyright copyright NOUN NN Number=Sing _ _ _ _ 2 1998 1998 NUM CD NumType=Card _ _ _ _ 3 Academic academic PROPN NNP Number=Sing _ _ _ _ 4 Press Press PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11756 # text = Document 0030012709 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012709 0030012709 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11757 # text = Interleukin-2 promoter activity in Epstein-Barr virus-transformed 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 promoter promoter NOUN NN Number=Sing _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 Barr Barr PROPN NNP Number=Sing _ _ _ _ 10 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 -transformed -transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ # sent_id = 11758 # text = B lymphocytes is controlled by nuclear factor-chi B. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 chi chi NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11759 # text = The regulation of interleukin (IL)-2 gene expression has been investigated mainly in T lymphocytes, the predominant producers of IL-2. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 14 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 mainly mainly ADV RB _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 predominant predominant ADJ JJ Degree=Pos _ _ _ _ 22 producers producer NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 11760 # text = However, B cells can also synthesize IL-2. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 B b ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 can can AUX MD VerbForm=Fin _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 synthesize synthesize VERB VB VerbForm=Inf _ _ _ _ 8 IL il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 11761 # text = In the present study we analyzed the control of IL-2 promoter activity in Epstein-Barr virus (EBV)-transformed B cell clones which are capable of secreting IL-2 at a low level after stimulation with phorbol 12-myristate 13-acetate and the Ca2+ ionophore ionomycin. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 control control NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 Barr Barr PROPN NNP Number=Sing _ _ _ _ 19 virus virus NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 - - PUNCT : _ _ _ _ SpaceAfter=No 24 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 B b ADJ JJ Degree=Pos _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 clones clone NOUN NNS Number=Plur _ _ _ _ 28 which which PRON WDT PronType=Rel _ _ _ _ 29 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 capable capable ADJ JJ Degree=Pos _ _ _ _ 31 of of SCONJ IN _ _ _ _ _ 32 secreting secret VERB VBG VerbForm=Ger _ _ _ _ 33 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 2 2 NUM CD NumType=Card _ _ _ _ 36 at at ADP IN _ _ _ _ _ 37 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 low low ADJ JJ Degree=Pos _ _ _ _ 39 level level NOUN NN Number=Sing _ _ _ _ 40 after after ADP IN _ _ _ _ _ 41 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 42 with with ADP IN _ _ _ _ _ 43 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 44 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 - - PUNCT : _ _ _ _ SpaceAfter=No 46 myristate myristate NOUN NN Number=Sing _ _ _ _ 47 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 acetate acetate NOUN NN Number=Sing _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 Ca2 ca2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 + + SYM SYM _ _ _ _ _ 54 ionophore ionophore ADJ JJ Degree=Pos _ _ _ _ 55 ionomycin ionomycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 11762 # text = Transient transfections using reporter constructs with multiples of transcription factor binding sites from the IL-2 promoter [distal nuclear factor (NF)-AT, proximal NF-AT, AP-1/Octamer (UPS) or NF-chi B (TCEd) sites] were performed. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 transfections transfection NOUN NNS Number=Plur _ _ _ _ 3 using use VERB VBG VerbForm=Ger _ _ _ _ 4 reporter reporter NOUN NN Number=Sing _ _ _ _ 5 constructs construct NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 multiples multiple NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 sites site NOUN NNS Number=Plur _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ _ 19 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 distal distal ADJ JJ Degree=Pos _ _ _ _ 21 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 AT at ADV RB _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 30 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 AT AT NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 38 Octamer Octamer PROPN NNP Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 UPS ups PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 or or CCONJ CC _ _ _ _ _ 43 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 chi chi PROPN NNP Number=Sing _ _ _ _ 46 B b PROPN NNP Number=Sing _ _ _ _ 47 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 48 TCEd TCEd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 ) ) PUNCT -RRB- _ _ _ _ _ 50 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 ] ] PUNCT -RRB- _ _ _ _ _ 52 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 53 performed perform VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 11763 # text = In EBV-transformed B clones, the chi B site exerted the strongest inducible activity; the NF-AT binding sites showed either no or only weak activity compared to Jurkat T cells. 1 In in ADP IN _ _ _ _ _ 2 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 chi chi PROPN NNP Number=Sing _ _ _ _ 10 B b PROPN NNP Number=Sing _ _ _ _ 11 site site NOUN NN Number=Sing _ _ _ _ 12 exerted exert VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 strongest strongest ADJ JJS Degree=Sup _ _ _ _ 15 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ; ; PUNCT , _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 AT at SCONJ IN _ _ _ _ _ 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 sites site NOUN NNS Number=Plur _ _ _ _ 24 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 either either CCONJ CC _ _ _ _ _ 26 no no DET DT _ _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 only only ADV RB _ _ _ _ _ 29 weak weak ADJ JJ Degree=Pos _ _ _ _ 30 activity activity NOUN NN Number=Sing _ _ _ _ 31 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 34 T T PROPN NNP Number=Sing _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 11764 # text = An IL-2 promoter bearing a defective NF-chi B site was completely inactive in EBV-transformed B cells, while it still had activity in Jurkat T cells. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ _ 6 bearing bear VERB VBG VerbForm=Ger _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 defective defective ADJ JJ Degree=Pos _ _ _ _ 9 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 chi chi PROPN NNP Number=Sing _ _ _ _ 12 B b PROPN NNP Number=Sing _ _ _ _ 13 site site NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 completely completely ADV RB _ _ _ _ _ 16 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 while while SCONJ IN _ _ _ _ _ 25 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 26 still still ADV RB _ _ _ _ _ 27 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 31 T T PROPN NNP Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 11765 # text = In seven EBV-B cell clones or lines differing in their capacity to secrete IL-2, the activity of the IL-2 promoter correlated well with the status of IL-2 secretion. 1 In in ADP IN _ _ _ _ _ 2 seven seven NUM CD NumType=Card _ _ _ _ 3 EBV Ebv NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 B b NOUN NN Number=Sing _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 clones clone NOUN NNS Number=Plur _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 lines line NOUN NNS Number=Plur _ _ _ _ 10 differing differ VERB VBG VerbForm=Ger _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 capacity capacity NOUN NN Number=Sing _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 secrete secrete VERB VB VerbForm=Inf _ _ _ _ 16 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ _ 28 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 well well ADV RB Degree=Pos _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 status status NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 2 2 NUM CD NumType=Card _ _ _ _ 37 secretion secretion NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 11766 # text = Similarly, a human immunodeficiency virus promoter, whose activity is controlled through chi B factors, was found to be active in the IL-2 producing EBV-B cells, but inactive in the non-IL-2-producing cells. 1 Similarly similarly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 6 virus virus NOUN NN Number=Sing _ _ _ _ 7 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 through through ADP IN _ _ _ _ _ 14 chi chi NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 active active ADJ JJ Degree=Pos _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ _ 28 producing produce VERB VBG VerbForm=Ger _ _ _ _ 29 EBV Ebv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 B b ADJ JJ Degree=Pos _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 but but CCONJ CC _ _ _ _ _ 35 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 non-IL non-il NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 producing produce VERB VBG VerbForm=Ger _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 11767 # text = Electrophoretic mobility shift assays using protein extracts from EBV-B cells and the IL-2 NF-chi B probe revealed the constitutive generation of chi B complexes in IL-2-secreting cells consisting mainly of heterodimeric p50/p65 complexes. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 using use VERB VBG VerbForm=Ger _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 extracts extract NOUN NNS Number=Plur _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 B B PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 chi chi PROPN NNP Number=Sing _ _ _ _ 21 B b PROPN NNP Number=Sing _ _ _ _ 22 probe probe ADV RB _ _ _ _ _ 23 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 26 generation generation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 chi chi ADJ JJ Degree=Pos _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 complexes complex NOUN NNS Number=Plur _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 secreting secreting VERB VBG VerbForm=Ger _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ _ 38 consisting consist VERB VBG VerbForm=Ger _ _ _ _ 39 mainly mainly ADV RB _ _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 heterodimeric heterodimeric ADJ JJ Degree=Pos _ _ _ _ 42 p50 p50 NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 / / PUNCT , _ _ _ _ SpaceAfter=No 44 p65 p65 NOUN NN Number=Sing _ _ _ _ 45 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 11768 # text = A weaker chi B complex formation and faster-migrating complexes were detected in non-IL-2-secreting cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 weaker weaker NOUN NN Number=Sing _ _ _ _ 3 chi chi NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 complex complex NOUN NN Number=Sing _ _ _ _ 6 formation formation NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 faster faster NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 migrating migrating NOUN NN Number=Sing _ _ _ _ 11 complexes complex NOUN NNS Number=Plur _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 non-IL non-il NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 secreting secreting VERB VBG VerbForm=Ger _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 11769 # text = These results demonstrate that the IL-2 NF-chi B site is indispensable for the activity of the IL-2 promoter in EBV-transformed B cells, whereas other transcription factors appear to be less important for IL-2 expression in these cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 chi chi NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 site site NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 indispensable indispensable ADJ JJ Degree=Pos _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ _ 24 promoter promoter NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 whereas whereas SCONJ IN _ _ _ _ _ 33 other other ADJ JJ Degree=Pos _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ _ 35 factors factor NOUN NNS Number=Plur _ _ _ _ 36 appear appear VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 37 to to PART TO _ _ _ _ _ 38 be be AUX VB VerbForm=Inf _ _ _ _ 39 less less ADV RBR Degree=Cmp _ _ _ _ 40 important important ADJ JJ Degree=Pos _ _ _ _ 41 for for ADP IN _ _ _ _ _ 42 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 2 2 NUM CD NumType=Card _ _ _ _ 45 expression expression NOUN NN Number=Sing _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 48 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11770 # text = Document 0030012712 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012712 0030012712 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11771 # text = Prostaglandin E2 1 Prostaglandin Prostaglandin NOUN NN Number=Sing _ _ _ _ 2 E2 E2 NOUN NN Number=Sing _ _ _ _ # sent_id = 11772 # text = Up-regulates HIV-1 long terminal repeat-driven gene activity in T cells via NF-kappaB-dependent and -independent signaling pathways. 1 Up- Up- SYM NFP _ _ _ _ SpaceAfter=No 2 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 long long ADJ JJ Degree=Pos _ _ _ _ 7 terminal terminal NOUN NN Number=Sing _ _ _ _ 8 repeat repeat VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 9 - - PUNCT : _ _ _ _ SpaceAfter=No 10 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 gene gene ADJ JJ Degree=Pos _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 via via ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 independent independent ADJ JJ Degree=Pos _ _ _ _ 25 signaling signaling NOUN NN Number=Sing _ _ _ _ 26 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11773 # text = Replication of human immunodeficiency virus type-1 (HIV-1) is highly dependent on the state of activation of the infected cells and is modulated by interactions between viral and host cellular factors. 1 Replication Replication NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT : _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 X LS _ _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 highly highly ADV RB _ _ _ _ _ 16 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 state state NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 infected infect ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 modulated modulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 interactions interaction NOUN NNS Number=Plur _ _ _ _ 31 between between ADP IN _ _ _ _ _ 32 viral viral ADJ JJ Degree=Pos _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 host host VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 36 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 11774 # text = Prostaglandin E2 (PGE2), a pleiotropic immunomodulatory molecule, is observed at elevated levels during HIV-1 infection as well as during the course of other pathogenic infections. 1 Prostaglandin Prostaglandin PROPN NNP Number=Sing _ _ _ _ 2 E2 E2 NUM CD NumType=Card _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 PGE2 PGE2 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 pleiotropic pleiotropic ADJ JJ Degree=Pos _ _ _ _ 9 immunomodulatory immunomodulatory ADJ JJ Degree=Pos _ _ _ _ 10 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 at at ADP IN _ _ _ _ _ 15 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 levels level NOUN NNS Number=Plur _ _ _ _ 17 during during ADP IN _ _ _ _ _ 18 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 infection infection NOUN NN Number=Sing _ _ _ _ 22 as as ADV RB _ _ _ _ _ 23 well well ADV RB Degree=Pos _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 during during ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 course course NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 other other ADJ JJ Degree=Pos _ _ _ _ 30 pathogenic pathogenic ADJ JJ Degree=Pos _ _ _ _ 31 infections infection NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 11775 # text = In 1G5, a Jurkat-derived T cell line stably transfected with a luciferase gene driven by HIV-1 long terminal repeat (LTR), we found that PGE2 markedly enhanced HIV-1 LTR-mediated reporter gene activity. 1 In in ADP IN _ _ _ _ _ 2 1G5 1G5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 line line NOUN NN Number=Sing _ _ _ _ 11 stably stably ADV RB _ _ _ _ _ 12 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 long long ADJ JJ Degree=Pos _ _ _ _ 23 terminal terminal NOUN NN Number=Sing _ _ _ _ 24 repeat repeat NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 30 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 32 PGE2 Pge2 NOUN NN Number=Sing _ _ _ _ 33 markedly markedly ADV RB _ _ _ _ _ 34 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ _ 38 LTR- LTR- NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 reporter reporter NOUN NN Number=Sing _ _ _ _ 41 gene gene NOUN NN Number=Sing _ _ _ _ 42 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 11776 # text = Experiments have been conducted to identify second messengers involved in this PGE2-dependent up-regulating effect on the regulatory element of HIV-1. 1 Experiments Experiment NOUN NNS Number=Plur _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 4 conducted conduct VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 identify identify VERB VB VerbForm=Inf _ _ _ _ 7 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 8 messengers messenger NOUN NNS Number=Plur _ _ _ _ 9 involved involved ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 12 PGE2 Pge2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 18 effect effect NOUN NN Number=Sing _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 22 element element NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 11777 # text = In this study, we present evidence indicating that signal transduction pathways induced by PGE2 necessitate the participation of cyclic AMP, protein kinase A, and Ca2+. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 present present ADJ JJ Degree=Pos _ _ _ _ 7 evidence evidence NOUN NN Number=Sing _ _ _ _ 8 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 signal signal ADJ JJ Degree=Pos _ _ _ _ 11 transduction transduction NOUN NN Number=Sing _ _ _ _ 12 pathways pathway NOUN NNS Number=Plur _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 PGE2 Pge2 NUM CD NumType=Card _ _ _ _ 16 necessitate necessitate NOUN NN Number=Sing _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 participation participation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 cyclic cyclic ADJ JJ Degree=Pos _ _ _ _ 21 AMP Amp NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ _ 24 kinase kinase NOUN NN Number=Sing _ _ _ _ 25 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 + + SYM SYM _ _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 11778 # text = Experiments conducted with different HIV-1 LTR-based vectors suggested that PGE2-mediated activation effect on HIV-1 transcription was transduced via both NF-kappaB-dependent and -independent signaling pathways. 1 Experiments Experiment NOUN NNS Number=Plur _ _ _ _ 2 conducted conduct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 different different ADJ JJ Degree=Pos _ _ _ _ 5 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 LTR Ltr NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 vectors vector NOUN NNS Number=Plur _ _ _ _ 12 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 that that SCONJ IN _ _ _ _ _ 14 PGE2 Pge2 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 effect effect NOUN NN Number=Sing _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 25 transduced transduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 via via ADP IN _ _ _ _ _ 27 both both DET DT _ _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 independent independent ADJ JJ Degree=Pos _ _ _ _ 36 signaling signaling NOUN NN Number=Sing _ _ _ _ 37 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 11779 # text = The involvement of NF-kappaB in the PGE2-dependent activating effect on HIV-1 transcription was further confirmed using a kappaB-regulated luciferase encoding vector and by electrophoretic mobility shift assays. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 involvement involvement NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 PGE2 Pge2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 activating activate NOUN NN Number=Sing _ _ _ _ 13 effect effect NOUN NN Number=Sing _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 further further ADV RB _ _ _ _ _ 21 confirmed confirm VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 using use VERB VBG VerbForm=Ger _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 kappaB kappaB NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 28 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 29 vector vector NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 33 mobility mobility NOUN NN Number=Sing _ _ _ _ 34 shift shift NOUN NN Number=Sing _ _ _ _ 35 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 11780 # text = Results from Northern blot and flow cytometric analyses, as well as the use of a selective antagonist indicated that PGE2 modulation of HIV-1 LTR-driven reporter gene activity in studied T lymphoid cells is transduced via the EP4 receptor subtype. 1 Results result NOUN NNS Number=Plur _ _ _ _ 2 from from ADP IN _ _ _ _ _ 3 Northern Northern PROPN NNP Number=Sing _ _ _ _ 4 blot blot PROPN NNP Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 flow flow VERB VB VerbForm=Inf _ _ _ _ 7 cytometric cytometric ADJ JJ Degree=Pos _ _ _ _ 8 analyses analysis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 as as ADV RB _ _ _ _ _ 11 well well ADV RB Degree=Pos _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 use use NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 selective selective ADJ JJ Degree=Pos _ _ _ _ 18 antagonist antagonist NOUN NN Number=Sing _ _ _ _ 19 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 PGE2 PGE2 NUM CD NumType=Card _ _ _ _ 22 modulation modulation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 LTR- LTR- NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 reporter reporter NOUN NN Number=Sing _ _ _ _ 30 gene gene NOUN NN Number=Sing _ _ _ _ 31 activity activity NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 studied studie VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 T T PROPN NNP Number=Sing _ _ _ _ 35 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ _ 37 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 transduced transduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 39 via via ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 EP4 EP4 PROPN NNP Number=Sing _ _ _ _ 42 receptor receptor NOUN NN Number=Sing _ _ _ _ 43 subtype subtype NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 11781 # text = These results suggest that secretion of PGE2 by macrophages in response to infection or inflammatory activators could induce signaling events resulting in activation of proviral DNA present into T cells latently infected with HIV-1. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 secretion secretion NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 PGE2 PGE2 NUM CD NumType=Card _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 response response NOUN NN Number=Sing _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 infection infection NOUN NN Number=Sing _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 16 activators activator NOUN NNS Number=Plur _ _ _ _ 17 could could AUX MD VerbForm=Fin _ _ _ _ 18 induce induce VERB VB VerbForm=Inf _ _ _ _ 19 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 20 events event NOUN NNS Number=Plur _ _ _ _ 21 resulting result VERB VBG VerbForm=Ger _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 proviral proviral ADJ JJ Degree=Pos _ _ _ _ 26 DNA Dna NOUN NN Number=Sing _ _ _ _ 27 present present ADJ JJ Degree=Pos _ _ _ _ 28 into into ADP IN _ _ _ _ _ 29 T t PROPN NNP Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 latently latently ADV RB _ _ _ _ _ 32 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11782 # text = Document 0030012716 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012716 0030012716 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11783 # text = Suppression of signals required for activation of transcription factor NF-kappa B in cells constitutively expressing the HTLV-I Tax protein. 1 Suppression Suppression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 signals signal NOUN NNS Number=Plur _ _ _ _ 4 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 constitutively constitutively ADV RB _ _ _ _ _ 17 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 HTLV Htlv NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ SpaceAfter=No 21 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 22 Tax tax PROPN NNP Number=Sing _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11784 # text = Transient short-term expression of the Tax protein of human T-cell leukemia virus type-I (HTLV-I) leads to activation of the pleiotropic transcription factor NF-kappa B. Consistent with findings obtained with transient expression assays, we observed marked accumulation of the transcription factor NF-kappa B in the nucleus of Namalwa B lymphoid cells, which constitutively express Tax. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 short short ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 term term NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 Tax tax PROPN NNP Number=Sing _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 15 virus virus NOUN NN Number=Sing _ _ _ _ 16 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 pleiotropic pleiotropic ADJ JJ Degree=Pos _ _ _ _ 30 transcription transcription NOUN NN Number=Sing _ _ _ _ 31 factor factor NOUN NN Number=Sing _ _ _ _ 32 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappa kappa PROPN NNP Number=Sing _ _ _ _ 35 B. B. PROPN NNP Number=Sing _ _ _ _ 36 Consistent consistent ADJ JJ Degree=Pos _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 findings finding NOUN NNS Number=Plur _ _ _ _ 39 obtained obtaine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 with with ADP IN _ _ _ _ _ 41 transient transient NOUN NN Number=Sing _ _ _ _ 42 expression expression NOUN NN Number=Sing _ _ _ _ 43 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 46 observed observe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 47 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 48 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 49 of of ADP IN _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 transcription transcription NOUN NN Number=Sing _ _ _ _ 52 factor factor NOUN NN Number=Sing _ _ _ _ 53 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 kappa kappa NOUN NN Number=Sing _ _ _ _ 56 B b NOUN NN Number=Sing _ _ _ _ 57 in in ADP IN _ _ _ _ _ 58 the the DET DT Definite=Def|PronType=Art _ _ _ _ 59 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 60 of of ADP IN _ _ _ _ _ 61 Namalwa Namalwa PROPN NNP Number=Sing _ _ _ _ 62 B B PROPN NNP Number=Sing _ _ _ _ 63 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 64 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 65 , , PUNCT , _ _ _ _ _ 66 which which PRON WDT PronType=Rel _ _ _ _ 67 constitutively constitutively ADV RB _ _ _ _ _ 68 express express ADJ JJ Degree=Pos _ _ _ _ 69 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 70 . . PUNCT . _ _ _ _ _ # sent_id = 11785 # text = In contrast, NF-kappa B activity was not detected in the nucleus following long-term expression of Tax in Jurkat T lymphocytes. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 15 following follow VERB VBG VerbForm=Ger _ _ _ _ 16 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 term term NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 Tax tax PROPN NNP Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 24 T T PROPN NNP Number=Sing _ _ _ _ 25 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11786 # text = The ability of both mitogens and cytokines to activate NF-kappa B was also blocked in Jurkat cells constitutively expressing Tax. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ability ability NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 both both DET DT _ _ _ _ _ 5 mitogens mitogen NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 activate activate VERB VB VerbForm=Inf _ _ _ _ 10 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa PROPN NNP Number=Sing _ _ _ _ 13 B b PROPN NNP Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 also also ADV RB _ _ _ _ _ 16 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 constitutively constitutively ADV RB _ _ _ _ _ 21 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 22 Tax tax PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 11787 # text = However, the activation of other mitogen-inducible transcription factors, such as Fos and Jun, was unaffected. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 other other ADJ JJ Degree=Pos _ _ _ _ 7 mitogen mitogen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 - - PUNCT : _ _ _ _ SpaceAfter=No 9 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 such such ADJ JJ Degree=Pos _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 Fos Fos PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 unaffected unaffected ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 11788 # text = Thus, depending on the cellular environment, the short- and long-term effects of Tax expression can be quite different. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 depending depend VERB VBG VerbForm=Ger _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 7 environment environment NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 short short ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 term term NOUN NN Number=Sing _ _ _ _ 16 effects effect NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 Tax tax NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 can can AUX MD VerbForm=Fin _ _ _ _ 21 be be AUX VB VerbForm=Inf _ _ _ _ 22 quite quite ADV RB _ _ _ _ _ 23 different different ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 11789 # text = Consequently, one function of Tax in cells infected with HTLV-I might involve cell-type-specific suppression, as opposed to activation, of distinct signal pathways. 1 Consequently consequently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 one one NUM CD NumType=Card _ _ _ _ 4 function function NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 Tax tax NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 14 might might AUX MD VerbForm=Fin _ _ _ _ 15 involve involve VERB VB VerbForm=Inf _ _ _ _ 16 cell cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 type- type- SYM NFP _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 suppression suppression NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 as as SCONJ IN _ _ _ _ _ 23 opposed oppose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 29 signal signal NOUN NN Number=Sing _ _ _ _ 30 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11790 # text = The cells lines described here should be useful for the delineation of signaling pathways utilized in the selective regulation of gene expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 lines line NOUN NNS Number=Plur _ _ _ _ 4 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 here here ADV RB PronType=Dem _ _ _ _ 6 should should AUX MD VerbForm=Fin _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 useful useful ADJ JJ Degree=Pos _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 delineation delineation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 signaling signaling NOUN NN Number=Sing _ _ _ _ 14 pathways pathway NOUN NNS Number=Plur _ _ _ _ 15 utilized utilize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 selective selective ADJ JJ Degree=Pos _ _ _ _ 19 regulation regulation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 gene gene ADJ JJ Degree=Pos _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11791 # text = Document 0030012719 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012719 0030012719 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11792 # text = Upregulation of bcl-2 by the Epstein-Barr virus latent membrane protein LMP1: a B-cell-specific response that is delayed relative to NF-kappa B activation and to induction of cell surface markers. 1 Upregulation Upregulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 Barr Barr PROPN NNP Number=Sing _ _ _ _ 11 virus virus NOUN NN Number=Sing _ _ _ _ 12 latent latent ADJ JJ Degree=Pos _ _ _ _ 13 membrane membrane NOUN NN Number=Sing _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ _ 15 LMP1 LMP1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 : : PUNCT : _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 specific specific ADJ JJ Degree=Pos _ _ _ _ 22 response response NOUN NN Number=Sing _ _ _ _ 23 that that PRON WDT PronType=Rel _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 delayed delay VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 relative relative ADV RB _ _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappa kappa NOUN NN Number=Sing _ _ _ _ 31 B b NOUN NN Number=Sing _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 to to ADP IN _ _ _ _ _ 35 induction induction NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 surface surface NOUN NN Number=Sing _ _ _ _ 39 markers marker NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11793 # text = An ability of the Epstein-Barr virus latent membrane protein LMP1 to enhance the survival of infected B cells through upregulation of the bcl-2 oncogene was first suggested by experiments involving gene transfection and the selection of stable LMP1+ clones (S.Henderson, M. Rowe, C.Gregory, F.Wang, E.Kieff, and A.Rickinson, Cell 65:1107-1115, 1991). 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 ability ability NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 Barr Barr PROPN NNP Number=Sing _ _ _ _ 8 virus virus NOUN NN Number=Sing _ _ _ _ 9 latent latent ADJ JJ Degree=Pos _ _ _ _ 10 membrane membrane NOUN NN Number=Sing _ _ _ _ 11 protein protein ADV WRB PronType=Rel _ _ _ _ 12 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 survival survival NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 through through ADP IN _ _ _ _ _ 22 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ _ 28 oncogene oncogene NOUN NN Number=Sing _ _ _ _ 29 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 30 first first ADV RB _ _ _ _ _ 31 suggested suggest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 experiments experiment NOUN NNS Number=Plur _ _ _ _ 34 involving involve VERB VBG VerbForm=Ger _ _ _ _ 35 gene gene ADJ JJ Degree=Pos _ _ _ _ 36 transfection transfection NOUN NN Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 selection selection NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 stable stable ADJ JJ Degree=Pos _ _ _ _ 42 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 + + SYM SYM _ _ _ _ _ 44 clones clone NOUN NNS Number=Plur _ _ _ _ 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 S.Henderson S.Henderson PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 M. M. PROPN NNP Number=Sing _ _ _ _ 49 Rowe Rowe PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 , , PUNCT , _ _ _ _ _ 51 C.Gregory C.Gregory PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 F.Wang F.Wang PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 , , PUNCT , _ _ _ _ _ 55 E.Kieff E.Kieff PROPN NNP Number=Sing _ _ _ SpaceAfter=No 56 , , PUNCT , _ _ _ _ _ 57 and and CCONJ CC _ _ _ _ _ 58 A.Rickinson A.Rickinson PROPN NNP Number=Sing _ _ _ SpaceAfter=No 59 , , PUNCT , _ _ _ _ _ 60 Cell cell NOUN NN Number=Sing _ _ _ _ 61 65:1107-1115 65:1107-1115 NUM CD NumType=Card _ _ _ SpaceAfter=No 62 , , PUNCT , _ _ _ _ _ 63 1991 1991 NUM CD NumType=Card _ _ _ SpaceAfter=No 64 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 65 . . PUNCT . _ _ _ _ _ # sent_id = 11794 # text = However, it was not possible to ascertain whether Bcl-2 upregulation was a specific consequence of LMP1 expression or an artifact of the selection procedure whereby rare Bcl-2+ cells already present in the starting population might best be able to tolerate the potentially toxic effects of LMP1. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 possible possible ADJ JJ Degree=Pos _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 ascertain ascertain VERB VB VerbForm=Inf _ _ _ _ 9 whether whether SCONJ IN _ _ _ _ _ 10 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 consequence consequence NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 LMP1 LMP1 NUM CD NumType=Card _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 or or CCONJ CC _ _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 artifact artifact NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 selection selection NOUN NN Number=Sing _ _ _ _ 27 procedure procedure NOUN NN Number=Sing _ _ _ _ 28 whereby whereby ADP IN _ _ _ _ _ 29 rare rare ADJ JJ Degree=Pos _ _ _ _ 30 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - SYM SYM _ _ _ _ SpaceAfter=No 32 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 + + SYM SYM _ _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ _ 35 already already ADV RB _ _ _ _ _ 36 present present ADJ JJ Degree=Pos _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 starting starting NOUN NN Number=Sing _ _ _ _ 40 population population NOUN NN Number=Sing _ _ _ _ 41 might might AUX MD VerbForm=Fin _ _ _ _ 42 best best ADV RBS Degree=Sup _ _ _ _ 43 be be AUX VB VerbForm=Inf _ _ _ _ 44 able able ADJ JJ Degree=Pos _ _ _ _ 45 to to PART TO _ _ _ _ _ 46 tolerate tolerate VERB VB VerbForm=Inf _ _ _ _ 47 the the DET DT Definite=Def|PronType=Art _ _ _ _ 48 potentially potentially ADV RB _ _ _ _ _ 49 toxic toxic ADJ JJ Degree=Pos _ _ _ _ 50 effects effect NOUN NNS Number=Plur _ _ _ _ 51 of of ADP IN _ _ _ _ _ 52 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 11795 # text = We therefore reexamined this issue by using two different experimental approaches that allowed LMP1- induced effects to be monitored immediately following expression of the viral protein and in the absence of selective pressures; activation of the NF-kappa B transcription factor and upregulation of the cell adhesion molecule ICAM-1 were used as early indices of LMP1 function. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 therefore therefore ADV RB _ _ _ _ _ 3 reexamined reexamin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 issue issue NOUN NN Number=Sing _ _ _ _ 6 by by SCONJ IN _ _ _ _ _ 7 using use VERB VBG VerbForm=Ger _ _ _ _ 8 two two NUM CD NumType=Card _ _ _ _ 9 different different ADJ JJ Degree=Pos _ _ _ _ 10 experimental experimental ADJ JJ Degree=Pos _ _ _ _ 11 approaches approache NOUN NNS Number=Plur _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 allowed allow VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 LMP1 LMP1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ _ 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 effects effect NOUN NNS Number=Plur _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 monitored monitor VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 immediately immediately ADV RB _ _ _ _ _ 22 following follow VERB VBG VerbForm=Ger _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 viral viral ADJ JJ Degree=Pos _ _ _ _ 27 protein protein NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 absence absence NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 selective selective ADJ JJ Degree=Pos _ _ _ _ 34 pressures pressure NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 ; ; PUNCT , _ _ _ _ _ 36 activation activation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 kappa kappa PROPN NNP Number=Sing _ _ _ _ 42 B b PROPN NNP Number=Sing _ _ _ _ 43 transcription transcription NOUN NN Number=Sing _ _ _ _ 44 factor factor NOUN NN Number=Sing _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 47 of of ADP IN _ _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 cell cell NOUN NN Number=Sing _ _ _ _ 50 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 51 molecule molecule NOUN NN Number=Sing _ _ _ _ 52 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 - - PUNCT , _ _ _ _ SpaceAfter=No 54 1 1 NUM CD NumType=Card _ _ _ _ 55 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 56 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 57 as as ADP IN _ _ _ _ _ 58 early early ADJ JJ Degree=Pos _ _ _ _ 59 indices index NOUN NNS Number=Plur _ _ _ _ 60 of of ADP IN _ _ _ _ _ 61 LMP1 LMP1 NUM CD NumType=Card _ _ _ _ 62 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 63 . . PUNCT . _ _ _ _ _ # sent_id = 11796 # text = In the first approach, stable clones of two B-cell lines carrying an LMP1 gene under the control of an inducible metallothionein promoter were induced to express LMP1 in all cells. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 4 approach approach NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 stable stable ADJ JJ Degree=Pos _ _ _ _ 7 clones clone NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 two two NUM CD NumType=Card _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 lines line NOUN NNS Number=Plur _ _ _ _ 14 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 LMP1 LMP1 NOUN NN Number=Sing _ _ _ _ 17 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 under under ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 control control NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 24 metallothionein metallothionein NOUN NN Number=Sing _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ _ 26 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 to to PART TO _ _ _ _ _ 29 express express VERB VB VerbForm=Inf _ _ _ _ 30 LMP1 Lmp1 NUM CD NumType=Card _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 all all DET DT _ _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 11797 # text = Activation of NK-kappa B and upregulation of ICAM-1 occurred within 24 h and were followed at 48 to 72 h by upregulation of Bcl-2. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NK NK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 ICAM ICAM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 within within ADP IN _ _ _ _ _ 15 24 24 NUM CD NumType=Card _ _ _ _ 16 h h NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 followed follow VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 at at ADP IN _ _ _ _ _ 21 48 48 NUM CD NumType=Card _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 72 72 NUM CD NumType=Card _ _ _ _ 24 h h NOUN NN Number=Sing _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11798 # text = In the second approach, we tested the generality of this phenomenon by transiently expressing LMP1 from a strong constitutively active promoter in a range of different cell types. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 4 approach approach NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 tested test VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 generality generality NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 12 phenomenon phenomenon NOUN NN Number=Sing _ _ _ _ 13 by by SCONJ IN _ _ _ _ _ 14 transiently transiently ADV RB _ _ _ _ _ 15 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 16 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 strong strong ADJ JJ Degree=Pos _ _ _ _ 20 constitutively constitutively ADV RB _ _ _ _ _ 21 active active ADJ JJ Degree=Pos _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 range range NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 different different ADJ JJ Degree=Pos _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 11799 # text = All six B-cell lines tested showed NF-kappa B activation in response to LMP1 expression, and this was followed in five of six lines by expression of ICAM-1 and Bcl-2. 1 All all DET PDT _ _ _ _ _ 2 six six NUM CD NumType=Card _ _ _ _ 3 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 lines line NOUN NNS Number=Plur _ _ _ _ 7 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 showed show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 response response NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 LMP1 LMP1 NUM CD NumType=Card _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 followed follow VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 five five NUM CD NumType=Card _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 six six NUM CD NumType=Card _ _ _ _ 28 lines line NOUN NNS Number=Plur _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 ICAM ICAM NUM CD NumType=Card _ _ _ SpaceAfter=No 33 - - SYM SYM _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 Bcl Bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 11800 # text = In the same experiments, all three non-B-cell lines showed NF-kappa B activation and ICAM-1 upregulation but never any effect upon Bcl-2. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 same same ADJ JJ Degree=Pos _ _ _ _ 4 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 all all DET DT _ _ _ _ _ 7 three three NUM CD NumType=Card _ _ _ _ 8 non non X AFX _ _ _ _ SpaceAfter=No 9 -B -b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 lines line NOUN NNS Number=Plur _ _ _ _ 13 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 24 but but CCONJ CC _ _ _ _ _ 25 never never ADV RB _ _ _ _ _ 26 any any DET DT _ _ _ _ _ 27 effect effect NOUN NN Number=Sing _ _ _ _ 28 upon upon ADP IN _ _ _ _ _ 29 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 11801 # text = We therefore conclude that Bcl-2 upregulation is part of the panoply of cellular changes induced by LMP1 but that the effect is cell type specific. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 therefore therefore ADV RB _ _ _ _ _ 3 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 part part NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 panoply panoply NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 16 changes change NOUN NNS Number=Plur _ _ _ _ 17 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 LMP1 LMP1 PROPN NNP Number=Sing _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 effect effect NOUN NN Number=Sing _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 type type NOUN NN Number=Sing _ _ _ _ 27 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 11802 # text = Our data also suggest that whilst NF-kappa B may be an essential component of LMP1 signal transduction, other cell-specific factors may be required to effect some functions of the viral protein. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 whilst whilst SCONJ IN _ _ _ _ _ 7 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 may may AUX MD VerbForm=Fin _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 essential essential ADJ JJ Degree=Pos _ _ _ _ 15 component component NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 LMP1 LMP1 NUM CD NumType=Card _ _ _ _ 18 signal signal NOUN NN Number=Sing _ _ _ _ 19 transduction transduction NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 other other ADJ JJ Degree=Pos _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 factors factor NOUN NNS Number=Plur _ _ _ _ 26 may may AUX MD VerbForm=Fin _ _ _ _ 27 be be AUX VB VerbForm=Inf _ _ _ _ 28 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 to to PART TO _ _ _ _ _ 30 effect effect VERB VB VerbForm=Inf _ _ _ _ 31 some some DET DT _ _ _ _ _ 32 functions function NOUN NNS Number=Plur _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 viral viral ADJ JJ Degree=Pos _ _ _ _ 36 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11803 # text = Document 0030012722 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012722 0030012722 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11804 # text = Inhibition of HIV-1 replication and NF-kappa B activity by cysteine and cysteine derivatives. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 replication replication NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 17 derivatives derivative NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11805 # text = HIV-1 proviral DNA contains two binding sites for the transcription factor NF-kappa B. HIV-1-infected individuals have, on average, abnormally high levels of tumour necrosis factor alpha (TNF alpha) and abnormally low plasma cysteine levels. 1 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 proviral proviral ADJ JJ Degree=Pos _ _ _ _ 5 DNA dna NOUN NN Number=Sing _ _ _ _ 6 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 sites site NOUN NNS Number=Plur _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ 19 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 -infected -infected ADJ JJ Degree=Pos _ _ _ _ 23 individuals individual NOUN NNS Number=Plur _ _ _ _ 24 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 average average NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 abnormally abnormally ADV RB _ _ _ _ _ 30 high high ADJ JJ Degree=Pos _ _ _ _ 31 levels level NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 tumour tumour NOUN NN Number=Sing _ _ _ _ 34 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ _ 36 alpha alpha NOUN NN Number=Sing _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 TNF Tnf NOUN NN Number=Sing _ _ _ _ 39 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 abnormally abnormally ADV RB _ _ _ _ _ 43 low low ADJ JJ Degree=Pos _ _ _ _ 44 plasma plasma NOUN NN Number=Sing _ _ _ _ 45 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 46 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 11806 # text = We therefore investigated the effects of cysteine and related thiols on HIV-1 replication and NF-kappa B expression. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 therefore therefore ADV RB _ _ _ _ _ 3 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 related related ADJ JJ Degree=Pos _ _ _ _ 10 thiols thiol NOUN NNS Number=Plur _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 replication replication NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 11807 # text = The experiments in this report show that cysteine or N-acetylcysteine (NAC) raise the intracellular glutathione (GSH) level and inhibit HIV-1 replication in persistently infected Molt-4 and U937 cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 experiments experiment NOUN NNS Number=Plur _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 report report NOUN NN Number=Sing _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 9 or or CCONJ CC _ _ _ _ _ 10 N- n- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 acetylcysteine acetylcysteine NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 NAC NAC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 raise raise VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 18 glutathione glutathione NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 GSH GSH INTJ UH _ _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 level level NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 inhibit inhibit NOUN NN Number=Sing _ _ _ _ 25 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 replication replication NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 persistently persistently ADV RB _ _ _ _ _ 31 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 Molt Molt NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 4 4 NUM CD NumType=Card _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 U937 U937 NUM CD NumType=Card _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 11808 # text = However, inhibition of HIV-1 replication appears not to be directly correlated with GSH levels. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 replication replication NOUN NN Number=Sing _ _ _ _ 9 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 be be AUX VB VerbForm=Inf _ _ _ _ 13 directly directly ADV RB _ _ _ _ _ 14 correlated correlated ADJ JJ Degree=Pos _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 GSH Gsh DET DT _ _ _ _ _ 17 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 11809 # text = Cysteine and NAC also inhibit NF-kappa B activity as determined by electrophoretic mobility shift assays and chloramphenicol acetyl-transferase (CAT) gene expression under control of NF-kappa B binding sites in uninfected cells. 1 Cysteine Cysteine PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 NAC NAC PROPN NNP Number=Sing _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 inhibit inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B b PROPN NNP Number=Sing _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 as as SCONJ IN _ _ _ _ _ 12 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 15 mobility mobility NOUN NN Number=Sing _ _ _ _ 16 shift shift NOUN NN Number=Sing _ _ _ _ 17 assays assay NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 20 acetyl acetyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 transferase transferase NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 CAT cat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 gene gene ADJ JJ Degree=Pos _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 under under ADP IN _ _ _ _ _ 29 control control NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 kappa kappa NOUN NN Number=Sing _ _ _ _ 34 B b NOUN NN Number=Sing _ _ _ _ 35 binding binding VERB VBG VerbForm=Ger _ _ _ _ 36 sites site NOUN NNS Number=Plur _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 uninfected uninfected ADJ JJ Degree=Pos _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 11810 # text = This suggests that the cysteine deficiency in HIV-1-infected individuals may cause an over-expression of NF-kappa B-dependent genes and enhance HIV-1 replication. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 cysteine cysteine NOUN NN Number=Sing _ _ _ _ 6 deficiency deficiency NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 -infected -infect ADJ JJ Degree=Pos _ _ _ _ 12 individuals individual NOUN NNS Number=Plur _ _ _ _ 13 may may AUX MD VerbForm=Fin _ _ _ _ 14 cause cause VERB VB VerbForm=Inf _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 over-expression over-expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 24 genes gene NOUN NNS Number=Plur _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 enhance enhance NOUN NN Number=Sing _ _ _ _ 27 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11811 # text = NAC may be considered for the treatment of HIV-1-infected individuals. 1 NAC Nac PROPN NNP Number=Sing _ _ _ _ 2 may may AUX MD VerbForm=Fin _ _ _ _ 3 be be AUX VB VerbForm=Inf _ _ _ _ 4 considered consider VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 treatment treatment NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 individuals individual NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11812 # text = Document 0030012723 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012723 0030012723 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11813 # text = Stimulation of HIV replication in mononuclear phagocytes by leukemia inhibitory factor. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HIV Hiv PROPN NNP Number=Sing _ _ _ _ 4 replication replication NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 7 phagocytes phagocyte NOUN NNS Number=Plur _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 10 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11814 # text = This study examined the effects of leukemia inhibitory factor (LIF) on human immunodeficiency virus (HIV) replication in mononuclear phagocytes (MNP). 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 8 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 LIF LIF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 16 virus virus NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 replication replication NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 23 phagocytes phagocyte NOUN NNS Number=Plur _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 MNP MNP NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 11815 # text = LIF induced a dose-dependent increase in p24 antigen production in the chronically infected promonocytic cell line U1. The magnitude and time kinetics of the LIF effects were similar to interleukin 1 (IL-1), IL-6, and tumor necrosis factor (TNF), other cytokines known to induce HIV replication in this cell line. 1 LIF LIF PRON PRP Case=Acc|Number=Sing|Person=1|PronType=Prs|Reflex=Yes _ _ _ _ 2 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 7 increase increase NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 p24 p24 NUM CD NumType=Card _ _ _ _ 10 antigen antigen NUM CD NumType=Card _ _ _ _ 11 production production NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 chronically chronically ADV RB _ _ _ _ _ 15 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 line line NOUN NN Number=Sing _ _ _ _ 19 U1 u1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ 21 The the DET DT Definite=Def|PronType=Art _ _ _ _ 22 magnitude magnitude NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 time time NOUN NN Number=Sing _ _ _ _ 25 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 LIF Lif PROPN NNP Number=Sing _ _ _ _ 29 effects effect NOUN NNS Number=Plur _ _ _ _ 30 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 similar similar ADJ JJ Degree=Pos _ _ _ _ 32 to to PART TO _ _ _ _ _ 33 interleukin interleukin VERB VB VerbForm=Inf _ _ _ _ 34 1 1 NUM CD NumType=Card _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - SYM SYM _ _ _ _ SpaceAfter=No 43 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 tumor tumor NOUN NN Number=Sing _ _ _ _ 47 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 48 factor factor NOUN NN Number=Sing _ _ _ _ 49 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 50 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 other other ADJ JJ Degree=Pos _ _ _ _ 54 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 55 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 56 to to ADP IN _ _ _ _ _ 57 induce induce PROPN NNP Number=Sing _ _ _ _ 58 HIV HIV PROPN NNP Number=Sing _ _ _ _ 59 replication replication NOUN NN Number=Sing _ _ _ _ 60 in in ADP IN _ _ _ _ _ 61 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 62 cell cell NOUN NN Number=Sing _ _ _ _ 63 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 64 . . PUNCT . _ _ _ _ _ # sent_id = 11816 # text = To characterize mechanisms responsible for these LIF effects, levels of HIV mRNA, activation of the DNA binding protein nuclear factor (NF)-kB, signal transduction pathways, and potential interactions with other cytokines were analyzed. 1 To to ADP IN _ _ _ _ _ 2 characterize characterize NOUN NN Number=Sing _ _ _ _ 3 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 4 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 LIF Lif ADJ JJ Degree=Pos _ _ _ _ 8 effects effect NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 levels level NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 HIV HIV PROPN NNP Number=Sing _ _ _ _ 13 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 DNA dna NOUN NN Number=Sing _ _ _ _ 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 protein protein ADV RB _ _ _ _ _ 21 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 - - PUNCT : _ _ _ _ SpaceAfter=No 27 kB kb NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 signal signal NOUN NN Number=Sing _ _ _ _ 30 transduction transduction NOUN NN Number=Sing _ _ _ _ 31 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 potential potential ADJ JJ Degree=Pos _ _ _ _ 35 interactions interaction NOUN NNS Number=Plur _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 other other ADJ JJ Degree=Pos _ _ _ _ 38 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 39 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 40 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 11817 # text = LIF increased steady-state levels of HIV mRNA at 2.0, 4.3, and 9.2 kB. 1 LIF Lif AUX VB VerbForm=Inf _ _ _ _ 2 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 steady steady ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 state state NOUN NN Number=Sing _ _ _ _ 6 levels level NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 HIV HIV PROPN NNP Number=Sing _ _ _ _ 9 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 10 at at ADP IN _ _ _ _ _ 11 2.0 2.0 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 4.3 4.3 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 9.2 9.2 NUM CD NumType=Card _ _ _ _ 17 kB kb NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 11818 # text = This was detectable by 24 h and persisted until 72 h. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 24 24 NUM CD NumType=Card _ _ _ _ 6 h h NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 persisted persist VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 until until ADP IN _ _ _ _ _ 10 72 72 NUM CD NumType=Card _ _ _ _ 11 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 11819 # text = The DNA binding protein NF-kB is a central mediator in cytokine activation of HIV transcription. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ _ 3 binding binding VERB VBG VerbForm=Ger _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 kB kb PROPN NNP Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 central central ADJ JJ Degree=Pos _ _ _ _ 11 mediator mediator NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 HIV HIV PROPN NNP Number=Sing _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 11820 # text = NF-kB 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kB kb PROPN NNP Number=Sing _ _ _ _ # sent_id = 11821 # text = levels were higher in unstimulated U1 cells as compared to the parent cell line U937. 1 levels level NOUN NNS Number=Plur _ _ _ _ 2 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 higher higher ADJ JJR Degree=Cmp _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 6 U1 U1 NUM CD NumType=Card _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 parent parent NOUN NN Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 line line NOUN NN Number=Sing _ _ _ _ 15 U937 U937 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 11822 # text = In both cell lines LIF increased NF-kB activity. 1 In in ADP IN _ _ _ _ _ 2 both both DET DT _ _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 lines line NOUN NNS Number=Plur _ _ _ _ 5 LIF Lif PROPN NNP Number=Sing _ _ _ _ 6 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kB kb PROPN NNP Number=Sing _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 11823 # text = Induction of NF-kB and HIV replication by cytokines are at least in part dependent on reactive oxygen intermediates. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kB kb PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 HIV HIV PROPN NNP Number=Sing _ _ _ _ 8 replication replication NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 at at ADV RB _ _ _ _ _ 13 least least ADV RBS Degree=Sup _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 part part ADJ JJ Degree=Pos _ _ _ _ 16 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 19 oxygen oxygen ADJ JJ Degree=Pos _ _ _ _ 20 intermediates intermediate NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 11824 # text = The oxygen radical scavenger N-acetyl-L-cysteine, but not an inhibitor of nitric oxide synthase, inhibited LIF-induced HIV replication. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 oxygen oxygen ADJ JJ Degree=Pos _ _ _ _ 3 radical radical ADJ JJ Degree=Pos _ _ _ _ 4 scavenger scavenger NOUN NN Number=Sing _ _ _ _ 5 N- N- PUNCT : _ _ _ _ SpaceAfter=No 6 acetyl acetyl ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 -L -l ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 cysteine cysteine NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 not not ADV RB _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 nitric nitric ADJ JJ Degree=Pos _ _ _ _ 17 oxide oxide NOUN NN Number=Sing _ _ _ _ 18 synthase synthase NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 LIF LIF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 HIV Hiv NOUN NN Number=Sing _ _ _ _ 25 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11825 # text = LIF induces the production of other cytokines in monocytes but its effects on HIV replication were not inhibited by antibodies to IL-1, TNF, or IL-6. 1 LIF LIF PRON PRP Case=Acc|Number=Sing|Person=1|PronType=Prs|Reflex=Yes _ _ _ _ 2 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 production production NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 other other ADJ JJ Degree=Pos _ _ _ _ 7 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 10 but but CCONJ CC _ _ _ _ _ 11 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 12 effects effect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 HIV Hiv PROPN NNP Number=Sing _ _ _ _ 15 replication replication NOUN NN Number=Sing _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 not not PART RB _ _ _ _ _ 18 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 IL il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - SYM SYM _ _ _ _ SpaceAfter=No 31 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 11826 # text = These results identify LIF as a stimulus of HIV replication. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 identify identify VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 LIF LIF ADP RP _ _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 stimulus stimulus NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 HIV Hiv NOUN NN Number=Sing _ _ _ _ 10 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 11827 # text = (ABSTRACT TRUNCATED AT 250 WORDS) 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 ABSTRACT ABSTRACT X GW _ _ _ _ _ 3 TRUNCATED Truncate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 AT at ADV RB _ _ _ _ _ 5 250 250 NUM CD NumType=Card _ _ _ _ 6 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11828 # text = Document 0030012733 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012733 0030012733 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11829 # text = NF-kappa B-dependent induction of the NF-kappa B p50 subunit gene promoter underlies self-perpetuation of human immunodeficiency virus transcription in monocytic cells. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 7 induction induction NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa PROPN NNP Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 p50 p50 NUM CD NumType=Card _ _ _ _ 15 subunit subunit NOUN NN Number=Sing _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 underlies underly VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 self self NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 perpetuation perpetuation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 25 virus virus NOUN NN Number=Sing _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11830 # text = The molecular mechanisms underlying the sustained nuclear translocation of NF-kappa B observed in U937 monocytic cells chronically infected with human immunodeficiency virus (HIV) were studied. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 3 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 4 underlying underly VERB VBG VerbForm=Ger _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 sustained sustain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 translocation translocation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa PROPN NNP Number=Sing _ _ _ _ 13 B b PROPN NNP Number=Sing _ _ _ _ 14 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 U937 U937 NUM CD NumType=Card _ _ _ _ 17 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 chronically chronically ADV RB _ _ _ _ _ 20 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 24 virus virus NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 11831 # text = The activity of the promoter regulating the synthesis of the p105 precursor of the NF-kappa B p50 subunit was enhanced in these cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activity activity NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 promoter promoter NOUN NN Number=Sing _ _ _ _ 6 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 p105 p105 NOUN NN Number=Sing _ _ _ _ 12 precursor precursor NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B b PROPN NNP Number=Sing _ _ _ _ 19 p50 p50 NUM CD NumType=Card _ _ _ _ 20 subunit subunit NOUN NN Number=Sing _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11832 # text = Deletions in this promoter indicated that this upregulation was mediated through the NF-kappa B- but not the AP-1-binding motif, by bona fide p50/p65 heterodimers. 1 Deletions Deletion NOUN NNS Number=Plur _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 promoter promoter NOUN NN Number=Sing _ _ _ _ 5 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 through through ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ _ 18 but but CCONJ CC _ _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 binding binding VERB VBG VerbForm=Ger _ _ _ _ 26 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 bona bona NOUN NN Number=Sing _ _ _ _ 30 fide fide NOUN NN Number=Sing _ _ _ _ 31 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 / / PUNCT , _ _ _ _ SpaceAfter=No 33 p65 p65 NOUN NN Number=Sing _ _ _ _ 34 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 11833 # text = Analysis of cytosolic extracts indicated that NF-kappa B levels were increased in HIV-infected cells. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 4 extracts extract NOUN NNS Number=Plur _ _ _ _ 5 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 HIV- HIV- PUNCT : _ _ _ _ SpaceAfter=No 16 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 11834 # text = In contrast to the transient NF-kappa B activation induced by phorbol ester, the permanent NF-kappa B translocation induced by HIV infection was not dependent on PKC isoenzymes alpha and beta as shown by the use of a specific inhibitor (GF 109203X). 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 transient transient NOUN NN Number=Sing _ _ _ _ 6 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 14 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 permanent permanent ADJ JJ Degree=Pos _ _ _ _ 18 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa PROPN NNP Number=Sing _ _ _ _ 21 B b PROPN NNP Number=Sing _ _ _ _ 22 translocation translocation NOUN NN Number=Sing _ _ _ _ 23 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 HIV HIV PROPN NNP Number=Sing _ _ _ _ 26 infection infection NOUN NN Number=Sing _ _ _ _ 27 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 28 not not PART RB _ _ _ _ _ 29 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 30 on on ADP IN _ _ _ _ _ 31 PKC Pkc ADJ JJ Degree=Pos _ _ _ _ 32 isoenzymes isoenzyme NOUN NNS Number=Plur _ _ _ _ 33 alpha alpha NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 beta beta NOUN NN Number=Sing _ _ _ _ 36 as as SCONJ IN _ _ _ _ _ 37 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 by by ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 use use NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 specific specific ADJ JJ Degree=Pos _ _ _ _ 44 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 GF gf PROPN NNP Number=Sing _ _ _ _ 47 109203 109203 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 X x NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 11835 # text = These observations indicate that during chronic HIV infection of U937 cells, continuous NF-kappa B (p50/p65) translocation results in p105 promoter upregulation with subsequent cytosolic NF-kappa B accumulation, ready for further translocation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 during during ADP IN _ _ _ _ _ 6 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 7 HIV Hiv NOUN NN Number=Sing _ _ _ _ 8 infection infection NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 U937 U937 NUM CD NumType=Card _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 continuous continuous ADJ JJ Degree=Pos _ _ _ _ 14 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 / / SYM SYM _ _ _ _ SpaceAfter=No 21 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 translocation translocation NOUN NN Number=Sing _ _ _ _ 24 results result NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 p105 p105 NUM CD NumType=Card _ _ _ _ 27 promoter promoter NOUN NN Number=Sing _ _ _ _ 28 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 31 cytosolic cytosolic ADJ JJ Degree=Pos _ _ _ _ 32 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappa kappa NOUN NN Number=Sing _ _ _ _ 35 B b NOUN NN Number=Sing _ _ _ _ 36 accumulation accumulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 ready ready ADJ JJ Degree=Pos _ _ _ _ 39 for for ADP IN _ _ _ _ _ 40 further further ADJ JJ Degree=Pos _ _ _ _ 41 translocation translocation NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 11836 # text = This HIV-mediated mechanism results in a self-perpetuating loop of NF-kappa B production. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 HIV- HIV- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 self self NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 perpetuating perpetuat VERB VBG VerbForm=Ger _ _ _ _ 11 loop loop NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11837 # text = Document 0030012734 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012734 0030012734 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11838 # text = Characterization of the murine cyclin-dependent kinase inhibitor gene p27Kip1. 1 Characterization Characterization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 murine murine NOUN NN Number=Sing _ _ _ _ 5 cyclin cyclin NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 8 kinase kinase NOUN NN Number=Sing _ _ _ _ 9 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 p27Kip1 p27kip1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11839 # text = The cyclin-dependent kinase inhibitor p27Kip1 plays an important role in regulating cell-cycle progression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cyclin cyclin NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ _ 6 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 7 p27Kip1 p27kip1 NOUN NN Number=Sing _ _ _ _ 8 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 important important ADJ JJ Degree=Pos _ _ _ _ 11 role role NOUN NN Number=Sing _ _ _ _ 12 in in SCONJ IN _ _ _ _ _ 13 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 cycle cycle NOUN NN Number=Sing _ _ _ _ 17 progression progression NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 11840 # text = p27Kip1 1 p27Kip1 p27kip1 NOUN NN Number=Sing _ _ _ _ # sent_id = 11841 # text = directly inhibits the catalytic activity of cyclin/cdks (cyclin-dependent kinase) complexes and/or interferes physically with cyclin/cdks activation by CAK. 1 directly directly ADV RB _ _ _ _ _ 2 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 catalytic catalytic ADJ JJ Degree=Pos _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 cyclin cyclin NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 / / PUNCT , _ _ _ _ SpaceAfter=No 9 cdks cdk NOUN NNS Number=Plur _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 cyclin cyclin NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 14 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 complexes complex NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ SpaceAfter=No 18 / / PUNCT , _ _ _ _ SpaceAfter=No 19 or or CCONJ CC _ _ _ _ _ 20 interferes interfere VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 physically physically ADV RB _ _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 cyclin cyclin NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 / / PUNCT , _ _ _ _ SpaceAfter=No 25 cdks cdk NOUN NNS Number=Plur _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 CAK CAK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 11842 # text = Interestingly, the expression level of p27Kip1 mRNA was maximal in resting Go T-cells and rapidly declined following anti-CD3 activation. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 level level NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 p27Kip1 p27Kip1 PROPN NNP Number=Sing _ _ _ _ 8 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 11 in in SCONJ IN _ _ _ _ _ 12 resting rest VERB VBG VerbForm=Ger _ _ _ _ 13 Go go PROPN NNP Number=Sing _ _ _ _ 14 T- T- SYM NFP _ _ _ _ SpaceAfter=No 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 rapidly rapidly ADV RB _ _ _ _ _ 18 declined decline VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 following follow VERB VBG VerbForm=Ger _ _ _ _ 20 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 11843 # text = We report here the cloning of p27Kip1 gene from murine genomic DNA and the functional analysis of the promoter of the p27Kip1 gene. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 here here ADV RB PronType=Dem _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 cloning cloning NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 p27Kip1 p27Kip1 NUM CD NumType=Card _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 murine murine PRON PRP _ _ _ _ _ 11 genomic genomic ADJ JJ Degree=Pos _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 functional functional ADJ JJ Degree=Pos _ _ _ _ 16 analysis analysis NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 p27Kip1 p27kip1 NOUN NN Number=Sing _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 11844 # text = The gene consists of at least three exons and spans more than 5.6 kb of DNA. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ _ 3 consists consist VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 at at ADV RB _ _ _ _ _ 6 least least ADV RBS Degree=Sup _ _ _ _ 7 three three NUM CD NumType=Card _ _ _ _ 8 exons exon NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 spans span NOUN NNS Number=Plur _ _ _ _ 11 more more ADJ JJR Degree=Cmp _ _ _ _ 12 than than ADP IN _ _ _ _ _ 13 5.6 5.6 NUM CD NumType=Card _ _ _ _ 14 kb kb NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 11845 # text = Primer extension and nuclease S1 protection analysis revealed two major transcription initiation sites. 1 Primer Primer NOUN NN Number=Sing _ _ _ _ 2 extension extension NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 nuclease nuclease NOUN NN Number=Sing _ _ _ _ 5 S1 s1 NOUN NN Number=Sing _ _ _ _ 6 protection protection NOUN NN Number=Sing _ _ _ _ 7 analysis analysis NOUN NN Number=Sing _ _ _ _ 8 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 two two NUM CD NumType=Card _ _ _ _ 10 major major ADJ JJ Degree=Pos _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 initiation initiation NOUN NN Number=Sing _ _ _ _ 13 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 11846 # text = The promoter region lacked a TATA box but contained potential binding sites for the transcriptional factors including two Sp1, CRE, Myb and NFkB located at positions -153, -178, -286, -875, and -1011, respectively. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 promoter promoter NOUN NN Number=Sing _ _ _ _ 3 region region NOUN NN Number=Sing _ _ _ _ 4 lacked lack VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 TATA TATa NOUN NN Number=Sing _ _ _ _ 7 box box NOUN NN Number=Sing _ _ _ _ 8 but but CCONJ CC _ _ _ _ _ 9 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 potential potential NOUN NN Number=Sing _ _ _ _ 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 sites site NOUN NNS Number=Plur _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 16 factors factor NOUN NNS Number=Plur _ _ _ _ 17 including include VERB VBG VerbForm=Ger _ _ _ _ 18 two two NUM CD NumType=Card _ _ _ _ 19 Sp1 sp1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 CRE CRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 Myb Myb PROPN NNP Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 NFkB NFkB PROPN NNP Number=Sing _ _ _ _ 26 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 at at ADP IN _ _ _ _ _ 28 positions position NOUN NNS Number=Plur _ _ _ _ 29 -153 -153 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 - - SYM SYM _ _ _ _ SpaceAfter=No 32 178 178 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 -286 -286 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 - - SYM SYM _ _ _ _ SpaceAfter=No 37 875 875 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 - - SYM SYM _ _ _ _ SpaceAfter=No 41 1011 1011 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 11847 # text = To analyze the regulatory mechanisms controlling p27Kip1 gene expression, we characterized the 5'-flanking region from nt -1609 to +178. The -326 to -615 region contained positive regulatory elements. 1 To to PART TO _ _ _ _ _ 2 analyze analyze VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 5 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 6 controlling control VERB VBG VerbForm=Ger _ _ _ _ 7 p27Kip1 p27kip1 NUM CD NumType=Card _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 12 characterized characterize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 18 region region NOUN NN Number=Sing _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 nt not PART RB _ _ _ _ _ 21 -1609 -1609 NUM CD NumType=Card _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 + + SYM SYM _ _ _ _ SpaceAfter=No 24 178 178 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ 26 The the DET DT Definite=Def|PronType=Art _ _ _ _ 27 -326 -326 NUM CD NumType=Card _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 - - SYM SYM _ _ _ _ SpaceAfter=No 30 615 615 NUM CD NumType=Card _ _ _ _ 31 region region NOUN NN Number=Sing _ _ _ _ 32 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 positive positive ADJ JJ Degree=Pos _ _ _ _ 34 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 35 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11848 # text = Document 0030012736 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012736 0030012736 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11849 # text = CTLA-4-Mediated inhibition of early events of T cell proliferation. 1 CTLA CTLa NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 -Mediated -Mediated ADJ JJ Degree=Pos _ _ _ _ 5 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 early early ADJ JJ Degree=Pos _ _ _ _ 8 events event NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11850 # text = CTLA-4 engagement by mAbs inhibits, while CD28 enhances, IL-2 production and proliferation upon T cell activation. 1 CTLA CTLa NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ _ 4 engagement engagement NOUN NN Number=Sing _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 mAbs mAbs NOUN NNS Number=Plur _ _ _ _ 7 inhibits inhibit NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 while while SCONJ IN _ _ _ _ _ 10 CD28 CD28 NOUN NN Number=Sing _ _ _ _ 11 enhances enhance NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 production production NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 19 upon upon ADP IN _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 11851 # text = Here, we have analyzed the mechanisms involved in CTLA-4-mediated inhibition of T cell activation of naive CD4+ T cells using 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 8 involved involved ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 CTLA CTLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 naive naive ADJ JJ Degree=Pos _ _ _ _ 22 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 + + SYM SYM _ _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 using use VERB VBG VerbForm=Ger _ _ _ _ # sent_id = 11852 # text = Ab cross-linking. 1 Ab Ab ADV RB _ _ _ _ _ 2 cross cross VERB VB Mood=Imp|VerbForm=Fin _ _ _ SpaceAfter=No 3 -linking -linking NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ _ # sent_id = 11853 # text = CTLA-4 ligation inhibited CD3/CD28-induced IL-2 mRNA accumulation by inhibiting IL-2 transcription, which appears to be mediated in part through decreasing NF-AT accumulation in the nuclei. 1 CTLA CTLa NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ _ 4 ligation ligation NOUN NN Number=Sing _ _ _ _ 5 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 CD3/CD28-induced CD3/CD28-induced VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 11 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 12 by by SCONJ IN _ _ _ _ _ 13 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 part part NOUN NN Number=Sing _ _ _ _ 26 through through SCONJ IN _ _ _ _ _ 27 decreasing decrease VERB VBG VerbForm=Ger _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 AT AT PROPN NNP Number=Sing _ _ _ _ 31 accumulation accumulation NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 nuclei nuclei NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 11854 # text = However, CTLA-4 ligation did not appear to affect the CD28-mediated stabilization of IL-2 mRNA. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 CTLA CTLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 4 4 NUM CD NumType=Card _ _ _ _ 6 ligation ligation NOUN NN Number=Sing _ _ _ _ 7 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 appear appear VERB VB VerbForm=Inf _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 affect affect VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 CD28 Cd28 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 stabilization stabilization NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 11855 # text = Further, CTLA-4 engagement inhibited progression through the cell cycle by inhibiting the production of cyclin D3, cyclin-dependent kinase (cdk)4, and cdk6 when the T cells were stimulated with anti-CD3/CD28 and with anti-CD3 alone. 1 Further further ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 CTLA CTLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 4 4 NUM CD NumType=Card _ _ _ _ 6 engagement engagement NOUN NN Number=Sing _ _ _ _ 7 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 progression progression NOUN NN Number=Sing _ _ _ _ 9 through through ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 cycle cycle NOUN NN Number=Sing _ _ _ _ 13 by by SCONJ IN _ _ _ _ _ 14 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 production production NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 cyclin cyclin NOUN NN Number=Sing _ _ _ _ 19 D3 D3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 cyclin cyclin NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 24 kinase kinase NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 cdk cdk NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 cdk6 cdk6 NUM CD NumType=Card _ _ _ _ 32 when when ADV WRB PronType=Int _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 T t PROPN NNP Number=Sing _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ _ 36 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 37 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 with with ADP IN _ _ _ _ _ 39 anti-CD3/CD28 anti-CD3/CD28 NUM CD NumType=Card _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 with with ADP IN _ _ _ _ _ 42 anti-CD3 anti-CD3 NOUN NN Number=Sing _ _ _ _ 43 alone alone ADV RB _ _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 11856 # text = These results indicate that CTLA-4 signaling inhibits events early in T cell activation both at IL-2 transcription and at the level of IL-2-independent events of the cell cycle, and does not simply oppose CD28-mediated costimulation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 CTLA CTLa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 4 4 NUM CD NumType=Card _ _ _ _ 8 signaling signaling VERB VBG VerbForm=Ger _ _ _ _ 9 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 10 events event NOUN NNS Number=Plur _ _ _ _ 11 early early ADV RB Degree=Pos _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 both both CCONJ CC _ _ _ _ _ 17 at at ADP IN _ _ _ _ _ 18 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 at at ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 level level NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 independent independent ADJ JJ Degree=Pos _ _ _ _ 32 events event NOUN NNS Number=Plur _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ _ 36 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 40 not not PART RB _ _ _ _ _ 41 simply simply ADV RB _ _ _ _ _ 42 oppose oppose VERB VB VerbForm=Inf _ _ _ _ 43 CD28 CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 -mediated -mediated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 costimulation costimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11857 # text = Document 0030012739 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012739 0030012739 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11858 # text = oriP is essential for EBNA gene promoter activity in Epstein-Barr virus-immortalized lymphoblastoid cell lines. 1 oriP orip SYM NFP _ _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 essential essential ADJ JJ Degree=Pos _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 EBNA EBNA PROPN NNP Number=Sing _ _ _ _ 6 gene gene PROPN NNP Number=Sing _ _ _ _ 7 promoter promoter ADJ JJ Degree=Pos _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 Barr Barr PROPN NNP Number=Sing _ _ _ _ 13 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 -immortalized -immortalize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 lymphoblastoid lymphoblastoid ADJ JJ Degree=Pos _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11859 # text = During Epstein-Barr virus latent infection of B lymphocytes in vitro, six viral nuclear antigens (EBNAs) are expressed from one of two promoters, Cp or 1 During during ADP IN _ _ _ _ _ 2 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 Barr Barr PROPN NNP Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 latent latent ADJ JJ Degree=Pos _ _ _ _ 7 infection infection NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 B b ADJ JJ Degree=Pos _ _ _ _ 10 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 six six NUM CD NumType=Card _ _ _ _ 15 viral viral ADJ JJ Degree=Pos _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 antigens antigen NOUN NNS Number=Plur _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 EBNAs EBNAs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 from from ADP IN _ _ _ _ _ 24 one one NUM CD NumType=Card _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 two two NUM CD NumType=Card _ _ _ _ 27 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 Cp cp PROPN NNP Number=Sing _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ # sent_id = 11860 # text = Wp, whose activities are mutually exclusive. 1 Wp Wp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 4 activities activity NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 mutually mutually ADV RB _ _ _ _ _ 7 exclusive exclusive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ _ # sent_id = 11861 # text = Upon infection, 1 Upon upon ADP IN _ _ _ _ _ 2 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ # sent_id = 11862 # text = Wp is initially active, followed by a switch to Cp for the duration of latency. 1 Wp Wp PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 initially initially ADV RB _ _ _ _ _ 4 active active ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 switch switch NOUN NN Number=Sing _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 Cp cp VERB VB VerbForm=Inf _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 duration duration NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 latency latency NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 11863 # text = In this study, the region upstream of Cp was analyzed for the presence of cis elements involved in regulating the activities of the EBNA gene promoters in established in vitro immortalized lymphoblastoid cell lines (LCLs). 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 region region NOUN NN Number=Sing _ _ _ _ 7 upstream upstream NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 Cp cp PROPN NNP Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 presence presence NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 cis cis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 elements element NOUN NNS Number=Plur _ _ _ _ 18 involved involved ADJ JJ Degree=Pos _ _ _ _ 19 in in SCONJ IN _ _ _ _ _ 20 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 activities activity NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 EBNA EBNA PROPN NNP Number=Sing _ _ _ _ 26 gene gene NOUN NN Number=Sing _ _ _ _ 27 promoters promoter NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 established establish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 vitro vitro NOUN NN Number=Sing _ _ _ _ 32 immortalized immortalize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 lymphoblastoid lymphoblastoid ADJ JJ Degree=Pos _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 lines line NOUN NNS Number=Plur _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 LCLs LCL NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 11864 # text = It was determined that oriP, the origin for episomal maintenance during latency, is essential for efficient transcription initiation from either Cp or 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 oriP orip PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 origin origin NOUN NN Number=Sing _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 episomal episomal ADJ JJ Degree=Pos _ _ _ _ 11 maintenance maintenance NOUN NN Number=Sing _ _ _ _ 12 during during ADP IN _ _ _ _ _ 13 latency latency NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 essential essential ADJ JJ Degree=Pos _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 initiation initiation NOUN NN Number=Sing _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 either either CCONJ CC _ _ _ _ _ 23 Cp cp PROPN NNP Number=Sing _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ # sent_id = 11865 # text = Wp in LCLs, as well as in some Burkitt's lymphoma cell lines. 1 Wp Wp VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 LCLs LCLs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 as as ADV RB _ _ _ _ _ 6 well well ADV RB Degree=Pos _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 some some DET DT _ _ _ _ _ 10 Burkitt Burkitt PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 's 's PART POS _ _ _ _ _ 12 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 11866 # text = Deletion of the EBNA2-dependent enhancer located upstream of Cp resulted in a ca. 1 Deletion Deletion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 EBNA2 EBNA2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 7 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 8 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 upstream upstream NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 Cp cp PROPN NNP Number=Sing _ _ _ _ 12 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 ca ca NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 11867 # text = two- to fivefold reduction in Cp activity in the LCLs assayed. 1 two two NUM CD NumType=Card _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 fivefold fivefold VERB VB VerbForm=Inf _ _ _ _ 5 reduction reduction NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 Cp cp ADJ JJ Degree=Pos _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 LCLs LCLs NOUN NNS Number=Plur _ _ _ _ 12 assayed assay VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 11868 # text = More extensive deletion of sequences upstream of Cp, including the EBNA2-dependent enhancer, resulted in nearly complete loss of Cp activity. 1 More more ADV RBR _ _ _ _ _ 2 extensive extensive ADJ JJ Degree=Pos _ _ _ _ 3 deletion deletion NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 sequences sequence NOUN NNS Number=Plur _ _ _ _ 6 upstream upstream NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Cp cp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 including include VERB VBG VerbForm=Ger _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 EBNA2 Ebna2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 nearly nearly ADV RB _ _ _ _ _ 20 complete complete ADJ JJ Degree=Pos _ _ _ _ 21 loss loss NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 Cp cp NOUN NN Number=Sing _ _ _ _ 24 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 11869 # text = This loss of activity was shown to correlate with deletion of two CCAAT boxes, a proximal CCAAT box located at bp -61 to -65 and a distal CCAAT box located at bp -253 to -257, upstream of Cp. Site-directed mutagenesis of these cis elements demonstrated that Cp activity is highly dependent on the presence of a properly positioned CCAAT box, with the dependence on the distal CCAAT box apparent only when the proximal CCAAT box was deleted or mutated. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 loss loss NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 activity activity NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 correlate correlate VERB VB VerbForm=Inf _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 deletion deletion NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 two two NUM CD NumType=Card _ _ _ _ 13 CCAAT Ccaat NOUN NN Number=Sing _ _ _ _ 14 boxes box NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 18 CCAAT Ccaat NOUN NN Number=Sing _ _ _ _ 19 box box NOUN NN Number=Sing _ _ _ _ 20 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 at at ADP IN _ _ _ _ _ 22 bp bp NOUN NN Number=Sing _ _ _ _ 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 61 61 NUM CD NumType=Card _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 -65 -65 NUM CD NumType=Card _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 distal distal ADJ JJ Degree=Pos _ _ _ _ 30 CCAAT Ccaat NOUN NN Number=Sing _ _ _ _ 31 box box NOUN NN Number=Sing _ _ _ _ 32 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 at at ADP IN _ _ _ _ _ 34 bp bp NOUN NN Number=Sing _ _ _ _ 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 253 253 NUM CD NumType=Card _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 - - SYM SYM _ _ _ _ SpaceAfter=No 39 257 257 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 upstream upstream NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 Cp cp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ 45 Site- Site- SYM NFP _ _ _ _ SpaceAfter=No 46 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 50 cis cis NOUN NN Number=Sing _ _ _ _ 51 elements element NOUN NNS Number=Plur _ _ _ _ 52 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 53 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 54 Cp cp NOUN NN Number=Sing _ _ _ _ 55 activity activity NOUN NN Number=Sing _ _ _ _ 56 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 57 highly highly ADV RB _ _ _ _ _ 58 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 59 on on ADP IN _ _ _ _ _ 60 the the DET DT Definite=Def|PronType=Art _ _ _ _ 61 presence presence NOUN NN Number=Sing _ _ _ _ 62 of of ADP IN _ _ _ _ _ 63 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 64 properly properly ADV RB _ _ _ _ _ 65 positioned position ADJ JJ Degree=Pos _ _ _ _ 66 CCAAT Ccaat NOUN NN Number=Sing _ _ _ _ 67 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 68 , , PUNCT , _ _ _ _ _ 69 with with ADP IN _ _ _ _ _ 70 the the DET DT Definite=Def|PronType=Art _ _ _ _ 71 dependence dependence NOUN NN Number=Sing _ _ _ _ 72 on on ADP IN _ _ _ _ _ 73 the the DET DT Definite=Def|PronType=Art _ _ _ _ 74 distal distal ADJ JJ Degree=Pos _ _ _ _ 75 CCAAT Ccaat NOUN NN Number=Sing _ _ _ _ 76 box box NOUN NN Number=Sing _ _ _ _ 77 apparent apparent NOUN NN Number=Sing _ _ _ _ 78 only only ADV RB _ _ _ _ _ 79 when when ADV WRB PronType=Int _ _ _ _ 80 the the DET DT Definite=Def|PronType=Art _ _ _ _ 81 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 82 CCAAT Ccaat NOUN NN Number=Sing _ _ _ _ 83 box box NOUN NN Number=Sing _ _ _ _ 84 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 85 deleted delete VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 86 or or CCONJ CC _ _ _ _ _ 87 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 88 . . PUNCT . _ _ _ _ _ # sent_id = 11870 # text = Deletion of the glucocorticoid response elements located at ca. bp -850 upstream of Cp did not result in a significant loss in activity. 1 Deletion Deletion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 5 response response NOUN NN Number=Sing _ _ _ _ 6 elements element NOUN NNS Number=Plur _ _ _ _ 7 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 at at ADP IN _ _ _ _ _ 9 ca ca NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ 11 bp bp NOUN NN Number=Sing _ _ _ _ 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 850 850 NUM CD NumType=Card _ _ _ _ 14 upstream upstream NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 Cp cp PROPN NNP Number=Sing _ _ _ _ 17 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 not not PART RB _ _ _ _ _ 19 result result VERB VB VerbForm=Inf _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 significant significant ADJ JJ Degree=Pos _ _ _ _ 23 loss loss NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11871 # text = In general, deletions which diminished Cp activity resulted in induction of Wp activity, consistent with suppression of Wp activity by transcriptional interference from Cp. 1 In in ADP IN _ _ _ _ _ 2 general general ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 deletions deletion NOUN NNS Number=Plur _ _ _ _ 5 which which PRON WDT PronType=Rel _ _ _ _ 6 diminished diminish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 Cp cp PROPN NNP Number=Sing _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 induction induction NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Wp Wp PROPN NNP Number=Sing _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 suppression suppression NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 Wp Wp PROPN NNP Number=Sing _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 24 interference interference NOUN NN Number=Sing _ _ _ _ 25 from from ADP IN _ _ _ _ _ 26 Cp cp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 11872 # text = The identification of oriP and the EBNA2-dependent enhancer as the major positive cis elements involved in regulating Cp activity in LCL suggests that EBNA gene transcription is largely autoregulated by EBNA 1 and EBNA 2. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 identification identification NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 oriP oriP NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 EBNA2 Ebna2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 10 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 major major ADJ JJ Degree=Pos _ _ _ _ 14 positive positive ADJ JJ Degree=Pos _ _ _ _ 15 cis cis NOUN NN Number=Sing _ _ _ _ 16 elements element NOUN NNS Number=Plur _ _ _ _ 17 involved involve ADJ JJ Degree=Pos _ _ _ _ 18 in in SCONJ IN _ _ _ _ _ 19 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 20 Cp cp PROPN NNP Number=Sing _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 LCL LCL PROPN NNP Number=Sing _ _ _ _ 24 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 EBNA EBNA PROPN NNP Number=Sing _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 largely largely ADV RB _ _ _ _ _ 31 autoregulated autoregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 EBNA EBNA PROPN NNP Number=Sing _ _ _ _ 34 1 1 NUM CD NumType=Card _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 EBNA EBNA PROPN NNP Number=Sing _ _ _ _ 37 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11873 # text = Document 0030012741 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012741 0030012741 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11874 # text = Nuclear factor of activated T cells and AP-1 are insufficient for IL-2 promoter activation: requirement for CD28 up-regulation of RE/AP. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 insufficient insufficient ADJ JJ Degree=Pos _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 : : PUNCT : _ _ _ _ _ 20 requirement requirement NOUN NN Number=Sing _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 23 up up NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 regulation regulation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 RE re PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 / / PUNCT , _ _ _ _ SpaceAfter=No 29 AP ap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11875 # text = IL-2 gene transcription in T cells requires both TCR and costimulatory signals. 1 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 both both CCONJ CC _ _ _ _ _ 11 TCR Tcr PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 costimulatory costimulatory ADJ JJ Degree=Pos _ _ _ _ 14 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 11876 # text = IL-2 promoter activation in Jurkat T cells stimulated with superantigen presented by Raji B cells requires CD28 activation. 1 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 promoter promoter NOUN NN Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 superantigen superantigen NOUN NNS Number=Plur _ _ _ _ 13 presented present VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 Raji Raji PROPN NNP Number=Sing _ _ _ _ 16 B b PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 CD28 CD28 NUM CD NumType=Card _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 11877 # text = The addition of rCTLA4 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 rCTLA4 rCTLA4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No # sent_id = 11878 # text = Ig, which blocks CD28 binding to its ligand, to the cultures decreased IL-2 promoter activation by >80%. Interestingly, CTLA4Ig did not significantly inhibit the activation of either NF of activated T cells (NFAT) or AP-1 reporters. 1 Ig ig PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 which which PRON WDT PronType=Rel _ _ _ _ 4 blocks block VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 9 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 cultures culture NOUN NNS Number=Plur _ _ _ _ 14 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2 2 NUM CD NumType=Card _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 > > PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 80% 80% SYM NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ 24 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 CTLA4 CTLA4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 Ig ig PROPN NNP Number=Sing _ _ _ _ 28 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 not not PART RB _ _ _ _ _ 30 significantly significantly ADV RB _ _ _ _ _ 31 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 activation activation NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 either either CCONJ CC _ _ _ _ _ 36 NF Nf ADP IN _ _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 T t PROPN NNP Number=Sing _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ _ 41 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 42 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 ) ) PUNCT -RRB- _ _ _ _ _ 44 or or CCONJ CC _ _ _ _ _ 45 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ _ 48 reporters reporter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 11879 # text = Therefore, activation of NFAT and AP-1 is insufficient for IL-2 promoter activation. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NFAT Nfat PROPN NNP Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 AP ap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 insufficient insufficient ADJ JJ Degree=Pos _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 11880 # text = In contrast, an RE/AP reporter was blocked by CTLA4Ig by >90%. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 RE re ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 / / PUNCT , _ _ _ _ SpaceAfter=No 7 AP ap NOUN NN Number=Sing _ _ _ _ 8 reporter reporter NOUN NN Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 CTLA4 CTLA4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 Ig ig PROPN NNP Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 >90% >90% X XX _ _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 11881 # text = Thus, the requirement for CD28 in IL-2 promoter activation appears to be due to RE/AP and not the NFAT or AP-1 sites. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 requirement requirement NOUN NN Number=Sing _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 CD28 CD28 PROPN NNP Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 due due ADP IN _ _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 RE re PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 / / PUNCT , _ _ _ _ SpaceAfter=No 20 AP ap NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 NFAT Nfat NOUN NN Number=Sing _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 11882 # text = In addition, these data suggest that transcriptional activation of RE/AP is not mediated by NFAT, because activation of a NFAT reporter is not affected by the addition of CTLA4Ig. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 data data NOUN NN Number=Sing _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 RE re PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 / / PUNCT , _ _ _ _ SpaceAfter=No 13 AP ap NOUN NN Number=Sing _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 because because SCONJ IN _ _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 NFAT NFAT ADJ JJ Degree=Pos _ _ _ _ 25 reporter reporter NOUN NN Number=Sing _ _ _ _ 26 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 not not PART RB _ _ _ _ _ 28 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 addition addition NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 CTLA4 CTLA4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 Ig ig PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11883 # text = Document 0030012745 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012745 0030012745 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11884 # text = Anoxia/reoxygenation-induced tolerance with respect to polymorphonuclear leukocyte adhesion to cultured endothelial cells. 1 Anoxia/ Anoxia/ SYM NFP _ _ _ _ SpaceAfter=No 2 reoxygenation reoxygenation NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 tolerance tolerance NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 respect respect NOUN NN Number=Sing _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 polymorphonuclear polymorphonuclear VERB VB VerbForm=Inf _ _ _ _ 10 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 11 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 cultured cultured VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 11885 # text = A nuclear factor-kappaB-mediated phenomenon. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 -kappaB -kappab NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 mediated mediated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 phenomenon phenomenon NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11886 # text = Exposing human umbilical vein endothelial cells (HUVECs) to anoxia/reoxygenation (A/R) results in an increase in polymorphonuclear leukocyte (PMN) adhesion to HUVECs. 1 Exposing Expose VERB VBG VerbForm=Ger _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 4 vein vein NOUN NN Number=Sing _ _ _ _ 5 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 anoxia anoxia ADP IN _ _ _ _ SpaceAfter=No 12 /reoxygenation /reoxygenation NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 A/ Aith NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 R R NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 results result NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 increase increase NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 polymorphonuclear polymorphonuclear ADJ JJ Degree=Pos _ _ _ _ 23 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 PMN PMN NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 HUVECs HUVEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 11887 # text = This A/R-induced hyperadhesion is completely prevented by a previous (24 hours earlier) exposure of HUVECs to A/R. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 A/R-induced A/R-induced ADJ JJ Degree=Pos _ _ _ _ 3 hyperadhesion hyperadhesion NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 completely completely ADV RB _ _ _ _ _ 6 prevented prevent VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 previous previous ADJ JJ Degree=Pos _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 24 24 NUM CD NumType=Card _ _ _ _ 12 hours hour NOUN NNS Number=Plur _ _ _ _ 13 earlier earlier ADV RBR Degree=Cmp _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 exposure exposure NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 HUVECs HUVEC PROPN NNP Number=Sing _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 A/R. A/R. PROPN NNP Number=Sing _ _ _ _ # sent_id = 11888 # text = This phenomenon has been termed "A/R tolerance." 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 phenomenon phenomenon NOUN NN Number=Sing _ _ _ _ 3 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 termed term VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 " " PUNCT `` _ _ _ _ SpaceAfter=No 7 A/R A/r ADJ JJ Degree=Pos _ _ _ _ 8 tolerance tolerance NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ SpaceAfter=No 10 " " PUNCT '' _ _ _ _ _ # sent_id = 11889 # text = Exposing HUVECs to A/R induces an increase in nuclear factor kappaB (NF-kappaB) in HUVEC nuclei within 4 hours. 1 Exposing Expose VERB VBG VerbForm=Ger _ _ _ _ 2 HUVECs HUVEC PROPN NNP Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 A/R A/R PROPN NNP Number=Sing _ _ _ _ 5 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 increase increase NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 HUVEC Huvec PROPN NNP Number=Sing _ _ _ _ 19 nuclei nuclei PROPN NNP Number=Sing _ _ _ _ 20 within within ADP IN _ _ _ _ _ 21 4 4 NUM CD NumType=Card _ _ _ _ 22 hours hour NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 11890 # text = Interfering with either NF-kappaB activation (proteasome inhibitor) or translocation (double-stranded oligonucleotides containing NF-kappaB binding sequence) prevents the development of A/R tolerance (ie, the increase in A/R-induced PMN adhesion to HUVECs is the same after the first and second A/R challenges). 1 Interfering interfere VERB VBG VerbForm=Ger _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 either either CCONJ CC _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 proteasome proteasome ADJ JJ Degree=Pos _ _ _ _ 10 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 translocation translocation NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 stranded stranded VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 oligonucleotides oligonucleotides NOUN NNS Number=Plur _ _ _ _ 19 containing contain VERB VBG VerbForm=Ger _ _ _ _ 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 23 binding binding VERB VBG VerbForm=Ger _ _ _ _ 24 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 prevents prevent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 development development NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 A/R A/r NOUN NN Number=Sing _ _ _ _ 31 tolerance tolerance NOUN NN Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 ie ie X FW _ _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 increase increase NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 A/R- A/R- NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 PMN Pmn ADP IN _ _ _ _ _ 41 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 42 to to ADP IN _ _ _ _ _ 43 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ _ 44 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 45 the the DET DT Definite=Def|PronType=Art _ _ _ _ 46 same same ADJ JJ Degree=Pos _ _ _ _ 47 after after ADP IN _ _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 52 A/R A/r NOUN NN Number=Sing _ _ _ _ 53 challenges challenge NOUN NNS Number=Plur _ _ _ SpaceAfter=No 54 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 11891 # text = NO production by HUVECs is increased after the second A/R challenge, but not after the first A/R challenge. 1 NO no DET DT _ _ _ _ _ 2 production production NOUN NN Number=Sing _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 HUVECs HUVEC PROPN NNP Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 after after ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 10 A/R A/r NOUN NN Number=Sing _ _ _ _ 11 challenge challenge NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 not not ADV RB _ _ _ _ _ 15 after after ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 18 A/R A/r NOUN NN Number=Sing _ _ _ _ 19 challenge challenge NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 11892 # text = Inhibition of NO synthase (NOS) during the second A/R challenge prevents the development of A/R tolerance with respect to PMN adhesion. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NO no DET DT _ _ _ _ _ 4 synthase synthase NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 NOS NOS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 during during ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 11 A/R A/r NOUN NN Number=Sing _ _ _ _ 12 challenge challenge NOUN NN Number=Sing _ _ _ _ 13 prevents prevent VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 development development NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 A/R A/r ADJ JJ Degree=Pos _ _ _ _ 18 tolerance tolerance NOUN NN Number=Sing _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 respect respect NOUN NN Number=Sing _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 PMN Pmn VERB VB VerbForm=Inf _ _ _ _ 23 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 11893 # text = However, while HUVECs contained endothelial NOS protein, no inducible NOS was detected in either tolerant or nontolerant cells. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 while while SCONJ IN _ _ _ _ _ 4 HUVECs Huvecs NOUN NNS Number=Plur _ _ _ _ 5 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 7 NOS no NOUN NN Number=Sing _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 no no DET DT _ _ _ _ _ 11 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 12 NOS Nos PROPN NNP Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 either either CCONJ CC _ _ _ _ _ 17 tolerant tolerant ADJ JJ Degree=Pos _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 nontolerant nontolerant ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 11894 # text = Further studies indicated that inhibition of GTP-cyclohydrolase I (an enzyme involved in de novo synthesis of an important cofactor for NOS activity, tetrahydrobiopterin) prevented the generation of NO in A/R-tolerant cells. 1 Further further ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 GTP GTP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 cyclohydrolase cyclohydrolase NOUN NN Number=Sing _ _ _ _ 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 enzyme enzyme NOUN NN Number=Sing _ _ _ _ 14 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 de de PROPN NNP Number=Sing _ _ _ _ 17 novo novo ADV RB _ _ _ _ _ 18 synthesis synthesis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 important important ADJ JJ Degree=Pos _ _ _ _ 22 cofactor cofactor NOUN NN Number=Sing _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 NOS NOS PROPN NNP Number=Sing _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 tetrahydrobiopterin tetrahydrobiopterin NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 generation generation NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 NO no DET DT _ _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 A/R- A/R- X AFX _ _ _ _ SpaceAfter=No 36 tolerant tolerant ADJ JJ Degree=Pos _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 11895 # text = Extracellular generation of NO (NO donor) did not effect the hyperadhesion response induced by the initial A/R challenge. 1 Extracellular Extracellular ADJ JJ Degree=Pos _ _ _ _ 2 generation generation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NO no PROPN NNP Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 NO no DET DT _ _ _ _ _ 7 donor donor NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 effect effect VERB VB VerbForm=Inf _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 hyperadhesion hyperadhesion NOUN NN Number=Sing _ _ _ _ 14 response response NOUN NN Number=Sing _ _ _ _ 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 initial initial ADJ JJ Degree=Pos _ _ _ _ 19 A/R A/r NOUN NN Number=Sing _ _ _ _ 20 challenge challenge NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 11896 # text = A/R also induced an oxidant stress in naive HUVECs, but not in A/R-tolerant HUVECs. 1 A/R A/R ADV RB _ _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 oxidant oxidant ADJ JJ Degree=Pos _ _ _ _ 6 stress stress NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 naive naive ADJ JJ Degree=Pos _ _ _ _ 9 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 not not ADV RB _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 A/R- A/R- SYM NFP _ _ _ _ SpaceAfter=No 15 tolerant tolerant ADJ JJ Degree=Pos _ _ _ _ 16 HUVECs HUVEC NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 11897 # text = Inhibition of NOS during the second A/R insult results in the generation of an oxidant stress similar to that observed after the first A/R challenge. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NOS no PROPN NNP Number=Sing _ _ _ _ 4 during during ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 7 A/R A/r NOUN NN Number=Sing _ _ _ _ 8 insult insult NOUN NN Number=Sing _ _ _ _ 9 results result NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 generation generation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 oxidant oxidant ADJ JJ Degree=Pos _ _ _ _ 16 stress stress NOUN NN Number=Sing _ _ _ _ 17 similar similar ADJ JJ Degree=Pos _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 20 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 after after ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 24 A/R A/r NOUN NN Number=Sing _ _ _ _ 25 challenge challenge NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11898 # text = Taken together, the findings of the present study are consistent with a role for NF-kappaB in the development of A/R tolerance (with respect to PMN adhesion), perhaps by transcriptional regulation of GTP-cyclohydrolase. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 findings finding NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 present present ADJ JJ Degree=Pos _ _ _ _ 9 study study NOUN NN Number=Sing _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 consistent consistent ADJ JJ Degree=Pos _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 role role NOUN NN Number=Sing _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 development development NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 A/R A/r PROPN NNP Number=Sing _ _ _ _ 24 tolerance tolerance NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 with with ADP IN _ _ _ _ _ 27 respect respect NOUN NN Number=Sing _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 PMN Pmn X GW _ _ _ _ _ 30 adhesion adhesion NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 perhaps perhaps ADV RB _ _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 36 regulation regulation NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 GTP GTP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 cyclohydrolase cyclohydrolase NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 11899 # text = The increased NO production during the second A/R insult reduces PMN adhesion most likely by reducing the intracellular oxidant stress induced by A/R. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 NO no DET DT _ _ _ _ _ 4 production production NOUN NN Number=Sing _ _ _ _ 5 during during ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 8 A/R A/r NOUN NN Number=Sing _ _ _ _ 9 insult insult NOUN NN Number=Sing _ _ _ _ 10 reduces reduce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 PMN PMN X GW _ _ _ _ _ 12 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 13 most most ADV RBS _ _ _ _ _ 14 likely likely ADV RB _ _ _ _ _ 15 by by SCONJ IN _ _ _ _ _ 16 reducing reduce VERB VBG VerbForm=Ger _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 19 oxidant oxidant ADJ JJ Degree=Pos _ _ _ _ 20 stress stress NOUN NN Number=Sing _ _ _ _ 21 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 A/ A/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 24 R. R. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11900 # text = Document 0030012746 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012746 0030012746 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11901 # text = Hypoxic induction of interleukin-8 gene expression in human endothelial cells. 1 Hypoxic Hypoxic ADJ JJ Degree=Pos _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 8 8 NUM CD NumType=Card _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11902 # text = Because leukocyte-mediated tissue damage is an important component of the pathologic picture in ischemia/reperfusion, we have sought mechanisms by which PMNs are directed into hypoxic tissue. 1 Because because SCONJ IN _ _ _ _ _ 2 leukocyte leukocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 tissue tissue NOUN NN Number=Sing _ _ _ _ 6 damage damage NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 important important ADJ JJ Degree=Pos _ _ _ _ 10 component component NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 pathologic pathologic ADJ JJ Degree=Pos _ _ _ _ 14 picture picture NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 ischemia ischemion PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 / / PUNCT , _ _ _ _ SpaceAfter=No 18 reperfusion reperfusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 21 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 sought seek VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 which which PRON WDT PronType=Rel _ _ _ _ 26 PMNs PMNs NOUN NNS Number=Plur _ _ _ _ 27 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 directed direct VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 into into ADP IN _ _ _ _ _ 30 hypoxic hypoxic ADJ JJ Degree=Pos _ _ _ _ 31 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 11903 # text = Incubation of human endothelial cells (ECs) in hypoxia, PO2 approximately 14-18 Torr, led to time-dependent release of IL-8 antigen into the conditioned medium; this was accompanied by increased chemotactic activity for PMNs, blocked by antibody to IL-8. 1 Incubation incubation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 ECs EC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 hypoxia hypoxia NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 PO2 PO2 NUM CD NumType=Card _ _ _ _ 13 approximately approximately ADV RB _ _ _ _ _ 14 14 14 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - SYM SYM _ _ _ _ SpaceAfter=No 16 18 18 NUM CD NumType=Card _ _ _ _ 17 Torr Torr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 24 release release NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 8 8 NUM CD NumType=Card _ _ _ _ 29 antigen antigen NUM CD NumType=Card _ _ _ _ 30 into into ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 conditioned condition ADJ JJ Degree=Pos _ _ _ _ 33 medium medium NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 ; ; PUNCT , _ _ _ _ _ 35 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 36 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 37 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 by by ADP IN _ _ _ _ _ 39 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 chemotactic chemotactic ADJ JJ Degree=Pos _ _ _ _ 41 activity activity NOUN NN Number=Sing _ _ _ _ 42 for for ADP IN _ _ _ _ _ 43 PMNs PMN NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 46 by by ADP IN _ _ _ _ _ 47 antibody antibody PRON NN Number=Sing _ _ _ _ 48 to to ADP IN _ _ _ _ _ 49 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 11904 # text = Production of IL-8 by hypoxic ECs occurred concomitantly with both increased levels of IL-8 mRNA, based on polymerase chain reaction analysis, and increased IL-8 transcription, based on nuclear run-on assays. 1 Production Production NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 8 8 NUM CD NumType=Card _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 hypoxic hypoxic ADJ JJ Degree=Pos _ _ _ _ 8 ECs Ecs PROPN NNPS Number=Plur _ _ _ _ 9 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 concomitantly concomitantly ADV RB _ _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 both both DET DT _ _ _ _ _ 13 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 levels level NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 8 8 PROPN NNP Number=Sing _ _ _ _ 19 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 on on ADP IN _ _ _ _ _ 23 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 24 chain chain NOUN NN Number=Sing _ _ _ _ 25 reaction reaction NOUN NN Number=Sing _ _ _ _ 26 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 8 8 NUM CD NumType=Card _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 on on ADP IN _ _ _ _ _ 37 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 38 run run NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT , _ _ _ _ SpaceAfter=No 40 on on ADP IN _ _ _ _ _ 41 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 11905 # text = Northern analysis of mRNA from hypoxic ECs also demonstrated increased levels of mRNA for macrophage chemotactic protein-1, another member of the chemokine superfamily of proinflammatory cytokines. 1 Northern northern ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 hypoxic hypoxic PROPN NNP Number=Sing _ _ _ _ 7 ECs Ecs PROPN NNP Number=Sing _ _ _ _ 8 also also ADV RB _ _ _ _ _ 9 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 levels level NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 macrophage macrophage ADJ JJ Degree=Pos _ _ _ _ 16 chemotactic chemotactic ADJ JJ Degree=Pos _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 another another DET DT _ _ _ _ _ 22 member member NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 chemokine chemokine NOUN NN Number=Sing _ _ _ _ 26 superfamily superfamily NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 29 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 11906 # text = IL-8 gene induction was associated with the presence of increased binding activity in nuclear extracts from hypoxic ECs for the NF-kB site. 1 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 8 8 NUM CD NumType=Card _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 induction induction NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 presence presence NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 extracts extract NOUN NNS Number=Plur _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 hypoxic hypoxic ADJ JJ Degree=Pos _ _ _ _ 20 ECs EC NOUN NNS Number=Plur _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kB kb PROPN NNP Number=Sing _ _ _ _ 26 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 11907 # text = Studies with human umbilical vein segments exposed to hypoxia also demonstrated increased elaboration of IL-8 antigen compared with normoxic controls. 1 Studies study NOUN NNS Number=Plur _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 umbilical umbilical ADJ JJ Degree=Pos _ _ _ _ 5 vein vein NOUN NN Number=Sing _ _ _ _ 6 segments segment NOUN NNS Number=Plur _ _ _ _ 7 exposed expose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 hypoxia hypoxia PROPN NNP Number=Sing _ _ _ _ 10 also also ADV RB _ _ _ _ _ 11 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 elaboration elaboration NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 8 8 NUM CD NumType=Card _ _ _ _ 18 antigen antigen NOUN NNS Number=Plur _ _ _ _ 19 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 normoxic normoxic ADJ JJ Degree=Pos _ _ _ _ 22 controls control NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 11908 # text = In mice exposed to hypoxia (PO2 approximately 30-40 Torr), there was increased pulmonary leukostasis, as evidenced by increased myeloperoxidase activity in tissue homogenates. 1 In in ADP IN _ _ _ _ _ 2 mice mouse NOUN NNS Number=Plur _ _ _ _ 3 exposed expose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 hypoxia hypoxia NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 PO2 PO2 NUM CD NumType=Card _ _ _ _ 8 approximately approximately ADV RB _ _ _ _ _ 9 30 30 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - SYM SYM _ _ _ _ SpaceAfter=No 11 40 40 NUM CD NumType=Card _ _ _ _ 12 Torr Torr NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 there there PRON EX _ _ _ _ _ 16 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 pulmonary pulmonary ADJ JJ Degree=Pos _ _ _ _ 19 leukostasis leukostasis NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 as as SCONJ IN _ _ _ _ _ 22 evidenced evidence VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 myeloperoxidase myeloperoxidase NOUN NN Number=Sing _ _ _ _ 26 activity activity NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 tissue tissue ADJ JJ Degree=Pos _ _ _ _ 29 homogenates homogenate NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 11909 # text = In parallel, increased levels of transcripts for IP-10, a murine homologue in the chemokine family related to IL-8, were observed in hypoxic lung tissue. 1 In in ADP IN _ _ _ _ _ 2 parallel parallel ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 levels level NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 IP ip NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 murine murine NOUN NN Number=Sing _ _ _ _ 15 homologue homologue NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 chemokine chemokine NOUN NN Number=Sing _ _ _ _ 19 family family NOUN NN Number=Sing _ _ _ _ 20 related related ADJ JJ Degree=Pos _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 8 8 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 hypoxic hypoxic ADJ JJ Degree=Pos _ _ _ _ 30 lung lung NOUN NN Number=Sing _ _ _ _ 31 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 11910 # text = Taken together, these data suggest that hypoxia constitutes a stimulus for leukocyte chemotaxis and tissue leukostasis. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 data data NOUN NN Number=Sing _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 8 hypoxia hypoxia NOUN NN Number=Sing _ _ _ _ 9 constitutes constitute VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 stimulus stimulus NOUN NN Number=Sing _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 14 chemotaxis chemotaxis NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 tissue tissue NOUN NN Number=Sing _ _ _ _ 17 leukostasis leukostasis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11911 # text = Document 0030012747 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012747 0030012747 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11912 # text = Coactivation by OCA-B: definition of critical regions and synergism with general cofactors. 1 Coactivation Coactivation NOUN NN Number=Sing _ _ _ _ 2 by by ADP IN _ _ _ _ _ 3 OCA OCA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 B B NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 : : PUNCT : _ _ _ _ _ 7 definition definition NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 critical critical ADJ JJ Degree=Pos _ _ _ _ 10 regions region NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 synergism synergism NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 general general ADJ JJ Degree=Pos _ _ _ _ 15 cofactors cofactor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11913 # text = Molecular dissection of the B-cell-specific transcription coactivator OCA-B has revealed distinct regions important, respectively, for recruitment to immunoglobulin promoters through interaction with octamer-bound Oct-1 and for subsequent coactivator function. 1 Molecular Molecular ADJ JJ Degree=Pos _ _ _ _ 2 dissection dissection NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 B- B- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 11 OCA OCA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 B B PROPN NNP Number=Sing _ _ _ _ 14 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 17 regions region NOUN NNS Number=Plur _ _ _ _ 18 important important ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 recruitment recruitment NOUN NN Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 immunoglobulin immunoglobulin VERB VB VerbForm=Inf _ _ _ _ 26 promoters promoter NOUN NNS Number=Plur _ _ _ _ 27 through through ADP IN _ _ _ _ _ 28 interaction interaction NOUN NN Number=Sing _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 bound bound ADJ JJ Degree=Pos _ _ _ _ 33 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 39 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 40 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 11914 # text = Further analysis of general coactivator requirements showed that selective removal of PC4 from the essential USA fraction severely impairs Oct-1 and OCA-B function in a cell-free system reconstituted with partially purified factors. 1 Further further ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 general general ADJ JJ Degree=Pos _ _ _ _ 5 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 6 requirements requirement NOUN NNS Number=Plur _ _ _ _ 7 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 selective selective ADJ JJ Degree=Pos _ _ _ _ 10 removal removal NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 PC4 PC4 NUM CD NumType=Card _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 essential essential ADJ JJ Degree=Pos _ _ _ _ 16 USA USA PROPN NNP Number=Sing _ _ _ _ 17 fraction fraction NOUN NN Number=Sing _ _ _ _ 18 severely severely ADV RB _ _ _ _ _ 19 impairs impairs ADJ JJ Degree=Pos _ _ _ _ 20 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 -1 -1 NUM CD NumType=Card _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 OCA OCa NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 B b NOUN NN Number=Sing _ _ _ _ 26 function function NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 free free ADJ JJ Degree=Pos _ _ _ _ 32 system system NOUN NN Number=Sing _ _ _ _ 33 reconstituted reconstitute VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 partially partially ADV RB _ _ _ _ _ 36 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 11915 # text = Full activity can be restored by the combined action of recombinant PC4 and the PC4-depleted USA fraction, thus suggesting a joint requirement for PC4 and another, USA-derived component(s) for optimal function of Oct-1/OCA-B in the reconstituted system. 1 Full full ADJ JJ Degree=Pos _ _ _ _ 2 activity activity NOUN NN Number=Sing _ _ _ _ 3 can can AUX MD VerbForm=Fin _ _ _ _ 4 be be AUX VB VerbForm=Inf _ _ _ _ 5 restored restore VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 action action NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 12 PC4 Pc4 NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 PC4 Pc4 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 depleted deplet VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 USA USA PROPN NNP Number=Sing _ _ _ _ 19 fraction fraction NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 thus thus ADV RB _ _ _ _ _ 22 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 joint joint ADJ JJ Degree=Pos _ _ _ _ 25 requirement requirement NOUN NN Number=Sing _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 PC4 Pc4 NUM CD NumType=Card _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 another another DET DT _ _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 USA USA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 component component NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 s s X AFX _ _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 for for ADP IN _ _ _ _ _ 39 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 40 function function NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 Oct-1/OCA Oct-1/OCA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 B B PROPN NNP Number=Sing _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 reconstituted reconstitute VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 48 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 11916 # text = Indeed, USA-derived PC2 was found to act synergistically with PC4 in reproducing the function of intact USA in the assay system. 1 Indeed indeed ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 USA USA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 derived derive VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 PC2 Pc2 NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 act act VERB VB VerbForm=Inf _ _ _ _ 11 synergistically synergistically ADV RB _ _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 PC4 Pc4 PROPN NNP Number=Sing _ _ _ _ 14 in in SCONJ IN _ _ _ _ _ 15 reproducing reproduce VERB VBG VerbForm=Ger _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 function function NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 intact intact ADJ JJ Degree=Pos _ _ _ _ 20 USA USA PROPN NNP Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 assay assay NOUN NN Number=Sing _ _ _ _ 24 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 11917 # text = Consistent with the requirement for PC4 in the reconstituted system, OCA-B was found to interact directly with PC4. 1 Consistent consistent ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 requirement requirement NOUN NN Number=Sing _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 PC4 PC4 NUM CD NumType=Card _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 reconstituted reconstitute VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 OCA OCa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 B b PROPN NNP Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 interact interact VERB VB VerbForm=Inf _ _ _ _ 19 directly directly ADV RB _ _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 PC4 PC4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 11918 # text = Surprisingly, however, removal of PC4 from the unfractionated nuclear extract has no detrimental effect on OCA-B/Oct-1-dependent transcription. 1 Surprisingly surprisingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 however however ADV RB _ _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 removal removal NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 PC4 PC4 NUM CD NumType=Card _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 unfractionated unfractionated ADJ JJ Degree=Pos _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 extract extract NOUN NN Number=Sing _ _ _ _ 13 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 no no DET DT _ _ _ _ _ 15 detrimental detrimental ADJ JJ Degree=Pos _ _ _ _ 16 effect effect NOUN NN Number=Sing _ _ _ _ 17 on on ADP IN _ _ _ _ _ 18 OCA OCa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 22 Oct oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 11919 # text = These results lead to a general model for the synergistic function of activation domains in Oct-1 and OCA-B (mediated by the combined action of the multiple USA components) and, further, suggest a functional redundancy in general coactivators. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 lead lead VERB VB VerbForm=Inf _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 general general ADJ JJ Degree=Pos _ _ _ _ 7 model model NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 synergistic synergistic ADJ JJ Degree=Pos _ _ _ _ 11 function function NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 domains domains NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 OCA OCa NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 B b NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 action action NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 32 USA USA PROPN NNP Number=Sing _ _ _ _ 33 components component NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 further further ADV RB _ _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 suggest suggest VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 40 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 41 functional functional ADJ JJ Degree=Pos _ _ _ _ 42 redundancy redundancy NOUN NN Number=Sing _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 general general ADJ JJ Degree=Pos _ _ _ _ 45 coactivators coactivator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11920 # text = Document 0030012752 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012752 0030012752 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11921 # text = Regulation of c-jun expression during induction of monocytic differentiation by okadaic acid. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 c- c- SYM NFP _ _ _ _ SpaceAfter=No 4 jun jun NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 during during ADP IN _ _ _ _ _ 7 induction induction NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 10 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 13 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11922 # text = The present work has examined the effects of okadaic acid, an inhibitor of type 1 and 2A protein phosphatases, on the regulation of c-jun expression during monocytic differentiation of U-937 leukemia cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 work work NOUN NN Number=Sing _ _ _ _ 4 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 examined examine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 effects effect NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 10 acid acid NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 type type NOUN NN Number=Sing _ _ _ _ 16 1 1 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 on on ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 regulation regulation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 c- c- SYM NFP _ _ _ _ SpaceAfter=No 28 jun jun NOUN NN Number=Sing _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 during during ADP IN _ _ _ _ _ 31 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 32 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 937 937 NUM CD NumType=Card _ _ _ _ 37 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 11923 # text = The results demonstrate that okadaic acid treatment is associated with induction of a differentiated monocyte phenotype characterized by: (a) growth arrest; (b) increases in Mac-1 cell surface antigen expression; (c) down-regulation of c-myc transcripts; and (d) induction of tumor necrosis factor gene expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 6 acid acid ADJ JJ Degree=Pos _ _ _ _ 7 treatment treatment NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 induction induction NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 16 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 17 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 by by ADP IN _ _ _ _ SpaceAfter=No 19 : : PUNCT : _ _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 a a X LS _ _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 growth growth NOUN NN Number=Sing _ _ _ _ 24 arrest arrest NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ; ; PUNCT , _ _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 b b NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 increases increase NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 Mac Mac PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 surface surface NOUN NN Number=Sing _ _ _ _ 36 antigen antigen NOUN NN Number=Sing _ _ _ _ 37 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ; ; PUNCT , _ _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 down down NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 regulation regulation NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 c- c- SYM NFP _ _ _ _ SpaceAfter=No 47 myc myc ADJ JJ Degree=Pos _ _ _ _ 48 transcripts transcript NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 ; ; PUNCT , _ _ _ _ _ 50 and and CCONJ CC _ _ _ _ _ 51 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 52 d would PROPN NNP Number=Sing _ _ _ SpaceAfter=No 53 ) ) PUNCT -RRB- _ _ _ _ _ 54 induction induction NOUN NN Number=Sing _ _ _ _ 55 of of ADP IN _ _ _ _ _ 56 tumor tumor NOUN NN Number=Sing _ _ _ _ 57 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 58 factor factor NOUN NN Number=Sing _ _ _ _ 59 gene gene NOUN NN Number=Sing _ _ _ _ 60 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ _ # sent_id = 11924 # text = This induction of monocytic differentiation was associated with transient increases in c-jun mRNA levels, which were maximal at 6 h. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 5 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 transient transient NOUN NN Number=Sing _ _ _ _ 10 increases increase NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 c- c- SYM NFP _ _ _ _ SpaceAfter=No 13 jun jun NOUN NN Number=Sing _ _ _ _ 14 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 15 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 20 at at ADP IN _ _ _ _ _ 21 6 6 NUM CD NumType=Card _ _ _ _ 22 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 11925 # text = Similar effects were obtained for the c-fos gene. 1 Similar similar ADJ JJ Degree=Pos _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 obtained obtain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 fos fos NOUN NNS Number=Plur _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 11926 # text = Run-on analysis demonstrated detectable levels of c-jun transcription in U-937 cells and that this rate is increased approximately 40-fold following okadaic acid exposure. 1 Run run PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 on on ADP IN _ _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 7 levels level NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 c- c- SYM NFP _ _ _ _ SpaceAfter=No 10 jun jun NOUN NN Number=Sing _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 937 937 NUM CD NumType=Card _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 that that SCONJ IN _ _ _ _ _ 19 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 20 rate rate NOUN NN Number=Sing _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 approximately approximately ADV RB _ _ _ _ _ 24 40 40 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 fold fold NOUN NN Number=Sing _ _ _ _ 27 following follow VERB VBG VerbForm=Ger _ _ _ _ 28 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 29 acid acid ADJ JJ Degree=Pos _ _ _ _ 30 exposure exposure NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11927 # text = c-jun mRNA levels were superinduced in cells treated with both okadaic acid and cycloheximide, whereas inhibition of protein synthesis had little, if any, effect on okadaic acid-induced c-jun transcription. 1 c- c- SYM NFP _ _ _ _ SpaceAfter=No 2 jun jun NOUN NN Number=Sing _ _ _ _ 3 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 4 levels level NOUN NNS Number=Plur _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 superinduced superinduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 both both DET DT _ _ _ _ _ 12 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 13 acid acid NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 whereas whereas SCONJ IN _ _ _ _ _ 18 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 22 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 little little ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 if if SCONJ IN _ _ _ _ _ 26 any any DET DT _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 effect effect NOUN NN Number=Sing _ _ _ _ 29 on on ADP IN _ _ _ _ _ 30 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 31 acid acid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 c- c- SYM NFP _ _ _ _ SpaceAfter=No 35 jun jun NOUN NN Number=Sing _ _ _ _ 36 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 11928 # text = The half-life of c-jun mRNA was similar (45-50 min) in both untreated and okadaic acid-induced cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 half half NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 life life NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 c- c- PUNCT : _ _ _ _ SpaceAfter=No 7 jun jun PROPN NNP Number=Sing _ _ _ _ 8 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 similar similar ADJ JJ Degree=Pos _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 45 45 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - SYM SYM _ _ _ _ SpaceAfter=No 14 50 50 NUM CD NumType=Card _ _ _ _ 15 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 both both DET DT _ _ _ _ _ 19 untreated untreated ADJ JJ Degree=Pos _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 22 acid acid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11929 # text = In contrast, treatment with both okadaic acid and cycloheximide was associated with stabilization (t 1/2 = 90 min) of c-jun transcripts. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 treatment treatment NOUN NN Number=Sing _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 both both DET DT _ _ _ _ _ 7 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 8 acid acid NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 stabilization stabilization NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 t t NUM CD NumType=Card _ _ _ _ 17 1/2 1/2 NUM CD NumType=Card _ _ _ _ 18 = = SYM SYM _ _ _ _ _ 19 90 90 NUM CD NumType=Card _ _ _ _ 20 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 c- c- SYM NFP _ _ _ _ SpaceAfter=No 24 jun jun NOUN NN Number=Sing _ _ _ _ 25 transcripts transcript NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11930 # text = Taken together, these findings indicate that the induction of c-jun transcription by okadaic acid is controlled primarily by a transcriptional mechanism. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 findings finding NOUN NNS Number=Plur _ _ _ _ 6 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 c- c- SYM NFP _ _ _ _ SpaceAfter=No 12 jun jun NOUN NN Number=Sing _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 okadaic okadaic ADJ JJ Degree=Pos _ _ _ _ 16 acid acid NOUN NN Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 primarily primarily ADV RB _ _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 23 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 11931 # text = Since previous studies have demonstrated that the c-jun gene is autoinduced by Jun/AP-1, we also studied transcription of c-jun promoter (positions -132/+170)-reporter gene constructs with and without a mutated AP-1 element. 1 Since since ADP IN _ _ _ _ _ 2 previous previous ADJ JJ Degree=Pos _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 c- c- SYM NFP _ _ _ _ SpaceAfter=No 9 jun jun NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 autoinduced autoinduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 Jun/ Jun/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 20 also also ADV RB _ _ _ _ _ 21 studied study VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 c- c- SYM NFP _ _ _ _ SpaceAfter=No 25 jun jun NOUN NN Number=Sing _ _ _ _ 26 promoter promoter NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 positions position NOUN NNS Number=Plur _ _ _ _ 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 132/+170 132/+170 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 reporter reporter NOUN NN Number=Sing _ _ _ _ 34 gene gene NOUN NN Number=Sing _ _ _ _ 35 constructs construct NOUN NNS Number=Plur _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 without without ADP IN _ _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 1 1 NUM CD NumType=Card _ _ _ _ 44 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 11932 # text = (ABSTRACT TRUNCATED AT 250 WORDS) 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 ABSTRACT ABSTRACT X GW _ _ _ _ _ 3 TRUNCATED Truncate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 AT at ADV RB _ _ _ _ _ 5 250 250 NUM CD NumType=Card _ _ _ _ 6 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11933 # text = Document 0030012757 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012757 0030012757 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11934 # text = Occurrence of a silencer of the interleukin-2 gene in naive but not in memory resting T helper lymphocytes. 1 Occurrence occurrence NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 silencer silencer NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2 2 NUM CD NumType=Card _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 naive naive ADJ JJ Degree=Pos _ _ _ _ 13 but but CCONJ CC _ _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 memory memory NOUN NN Number=Sing _ _ _ _ 17 resting rest VERB VBG VerbForm=Ger _ _ _ _ 18 T t NUM CD NumType=Card _ _ _ _ 19 helper helper NOUN NN Number=Sing _ _ _ _ 20 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11935 # text = In the immune system the first activation of a naive T cell by antigen is a key step in the shaping of the peripheral T cell specificity repertoire and maintenance of self-tolerance. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 immune immune ADJ JJ Degree=Pos _ _ _ _ 4 system system NOUN NN Number=Sing _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 naive naive ADJ JJ Degree=Pos _ _ _ _ 11 T T PROPN NNP Number=Sing _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 antigen antigen NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 key key ADJ JJ Degree=Pos _ _ _ _ 18 step step NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 shaping shaping NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 25 T T PROPN NNP Number=Sing _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 specificity specificity NOUN NN Number=Sing _ _ _ _ 28 repertoire repertoire NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 maintenance maintenance NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 self self NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 tolerance tolerance NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 11936 # text = In the present study, analysis of the interleukin-2 (IL-2) gene activation shows that naive human helper T cells (cord blood CD4+ T cells, adult CD4+CD45RO- 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 analysis analysis NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 X LS _ _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 gene gene ADJ JJ Degree=Pos _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 shows show NOUN NNS Number=Plur _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 naive naive VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 helper helper NOUN NN Number=Sing _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 cord cord NOUN NN Number=Sing _ _ _ _ 28 blood blood NOUN NN Number=Sing _ _ _ _ 29 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 + + SYM SYM _ _ _ _ _ 31 T t NUM CD NumType=Card _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 adult adult NOUN NN Number=Sing _ _ _ _ 35 CD4+ Cd4+ NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 CD45RO Cd45ro NUM CD NumType=Card _ _ _ SpaceAfter=No 37 - - PUNCT , _ _ _ _ _ # sent_id = 11937 # text = T cells) regulate IL-2 transcription by a mechanism involving both a silencer and an activator acting on the purine-rich IL-2 promoter elements (NF-AT binding sites). 1 T t ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 ) ) PUNCT -RRB- _ _ _ _ _ 4 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 5 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 12 involving involve VERB VBG VerbForm=Ger _ _ _ _ 13 both both CCONJ CC _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 silencer silencer NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 activator activator NOUN NN Number=Sing _ _ _ _ 19 acting act VERB VBG VerbForm=Ger _ _ _ _ 20 on on ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 purine purine NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 rich rich ADJ JJ Degree=Pos _ _ _ _ 25 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ _ 29 elements element NOUN NNS Number=Plur _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 AT AT SCONJ IN _ _ _ _ _ 34 binding binding VERB VBG VerbForm=Ger _ _ _ _ 35 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 11938 # text = By contrast, memory cells, either in vitro activated helper T cells reverting to a resting state, or CD4+ T (memory) clones, or CD4+CD45RO+ 1 By by ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 memory memory NOUN NN Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 either either CCONJ CC _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 vitro vitro NOUN NN Number=Sing _ _ _ _ 10 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 helper helper ADP IN _ _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 reverting revert VERB VBG VerbForm=Ger _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 resting resting VERB VBG VerbForm=Ger _ _ _ _ 18 state state NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 + + SYM SYM _ _ _ _ _ 23 T t NUM CD NumType=Card _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 memory memory NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 or or CCONJ CC _ _ _ _ _ 30 CD4+ CD4+ SYM SYM _ _ _ _ SpaceAfter=No 31 CD45RO CD45RO NUM CD NumType=Card _ _ _ SpaceAfter=No 32 + + SYM SYM _ _ _ _ _ # sent_id = 11939 # text = T cells isolated ex vivo, no longer have a silencer. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 ex ex NOUN NN Number=Sing _ _ _ _ 5 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 no no ADV RB _ _ _ _ _ 8 longer longer ADV RBR Degree=Cmp _ _ _ _ 9 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 silencer silencer NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 11940 # text = Their IL-2 transcription seems to be controlled solely by the transition from inactive to active functional state of a positive transcription factor binding to these promoter elements as well as its cytoplasmic or nuclear location: in resting memory T cells the activator is located in the cytoplasm and is inactive, whereas in stimulated cells it is functional in promoting transcription and now resides in the nucleus. 1 Their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 2 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 controlled control VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 solely solely ADV RB _ _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 transition transition NOUN NN Number=Sing _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 active active ADJ JJ Degree=Pos _ _ _ _ 18 functional functional ADJ JJ Degree=Pos _ _ _ _ 19 state state NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 positive positive ADJ JJ Degree=Pos _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 binding bind VERB VBG VerbForm=Ger _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ _ 29 elements element NOUN NNS Number=Plur _ _ _ _ 30 as as ADV RB _ _ _ _ _ 31 well well ADV RB Degree=Pos _ _ _ _ 32 as as ADP IN _ _ _ _ _ 33 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 34 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 35 or or CCONJ CC _ _ _ _ _ 36 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 37 location location NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 : : PUNCT : _ _ _ _ _ 39 in in SCONJ IN _ _ _ _ _ 40 resting rest VERB VBG VerbForm=Ger _ _ _ _ 41 memory memory NOUN NN Number=Sing _ _ _ _ 42 T t PROPN NNP Number=Sing _ _ _ _ 43 cells cell VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 activator activator NOUN NN Number=Sing _ _ _ _ 46 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 47 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 53 inactive inactive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 54 , , PUNCT , _ _ _ _ _ 55 whereas whereas SCONJ IN _ _ _ _ _ 56 in in ADP IN _ _ _ _ _ 57 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 58 cells cell NOUN NNS Number=Plur _ _ _ _ 59 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 60 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 61 functional functional ADJ JJ Degree=Pos _ _ _ _ 62 in in SCONJ IN _ _ _ _ _ 63 promoting promote VERB VBG VerbForm=Ger _ _ _ _ 64 transcription transcription NOUN NN Number=Sing _ _ _ _ 65 and and CCONJ CC _ _ _ _ _ 66 now now ADV RB _ _ _ _ _ 67 resides reside NOUN NNS Number=Plur _ _ _ _ 68 in in ADP IN _ _ _ _ _ 69 the the DET DT Definite=Def|PronType=Art _ _ _ _ 70 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 71 . . PUNCT . _ _ _ _ _ # sent_id = 11941 # text = Thus, the regulation of the gene coding for the main T cell growth factor changes irreversibly after the first encounter of T cells with antigen. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 coding coding VERB VBG VerbForm=Ger _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 main main ADJ JJ Degree=Pos _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 growth growth NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 changes change NOUN NNS Number=Plur _ _ _ _ 17 irreversibly irreversibly ADV RB _ _ _ _ _ 18 after after ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 21 encounter encounter NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 antigen antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 11942 # text = It is most likely that the presence of a silencer contributes to the more stringent activation requirements of naive CD4+ T cells. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 most most ADV RBS _ _ _ _ _ 4 likely likely ADJ JJ Degree=Pos _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 presence presence NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 silencer silencer NOUN NN Number=Sing _ _ _ _ 11 contributes contribute VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 more more ADV RBR _ _ _ _ _ 15 stringent stringent ADJ JJ Degree=Pos _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 requirements requirement NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 naive naive ADJ JJ Degree=Pos _ _ _ _ 20 CD4 CD4 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 + + SYM SYM _ _ _ _ _ 22 T t NUM CD NumType=Card _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11943 # text = Document 0030012759 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012759 0030012759 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11944 # text = Permanent occupancy of the human immunodeficiency virus type 1 enhancer by NF-kappa B is needed for persistent viral replication in monocytes. 1 Permanent permanent ADJ JJ Degree=Pos _ _ _ _ 2 occupancy occupancy NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 7 virus virus NOUN NN Number=Sing _ _ _ _ 8 type type NOUN NN Number=Sing _ _ _ _ 9 1 1 NUM CD NumType=Card _ _ _ _ 10 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa PROPN NNP Number=Sing _ _ _ _ 15 B b PROPN NNP Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 needed need VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 persistent persistent ADJ JJ Degree=Pos _ _ _ _ 20 viral viral ADJ JJ Degree=Pos _ _ _ _ 21 replication replication NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11945 # text = This work aimed to ascertain the role of kappaB-responsive elements of the human immunodeficiency virus type 1 (HIV-1) enhancer not only in early initiation but also in long-term maintenance of proviral transcription in cells of the monocytic lineage. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 work work NOUN NN Number=Sing _ _ _ _ 3 aimed aim VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 ascertain ascertain VERB VB VerbForm=Inf _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 role role NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 12 elements element NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 17 virus virus NOUN NN Number=Sing _ _ _ _ 18 type type NOUN NN Number=Sing _ _ _ _ 19 1 1 NUM CD NumType=Card _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 26 not not ADV RB _ _ _ _ _ 27 only only ADV RB _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 early early ADJ JJ Degree=Pos _ _ _ _ 30 initiation initiation NOUN NN Number=Sing _ _ _ _ 31 but but CCONJ CC _ _ _ _ _ 32 also also ADV RB _ _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 long long ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 term term NOUN NN Number=Sing _ _ _ _ 37 maintenance maintenance NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 proviral proviral ADJ JJ Degree=Pos _ _ _ _ 40 transcription transcription NOUN NN Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 cells cell NOUN NNS Number=Plur _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 46 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 11946 # text = For this purpose, we used three main approaches. 1 For for ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 purpose purpose NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 three three NUM CD NumType=Card _ _ _ _ 8 main main ADJ JJ Degree=Pos _ _ _ _ 9 approaches approach NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 11947 # text = The first was to abruptly terminate tumor necrosis factor-induced NF-kappaB binding to the enhancer sequences in U1 monocytic cells, using a short pulse of exogenous tumor necrosis factor. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 abruptly abruptly ADV RB _ _ _ _ _ 6 terminate terminate VERB VB VerbForm=Inf _ _ _ _ 7 tumor tumor NOUN NN Number=Sing _ _ _ _ 8 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 -induced -induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 18 sequences sequence NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 U1 U1 NUM CD NumType=Card _ _ _ _ 21 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 using use VERB VBG VerbForm=Ger _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 short short ADJ JJ Degree=Pos _ _ _ _ 27 pulse pulse NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 30 tumor tumor NOUN NN Number=Sing _ _ _ _ 31 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 32 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 11948 # text = This resulted in concomitant decrease in nuclear NF-kappaB DNA-binding activity and endogenous long terminal repeat transcriptional activity. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 concomitant concomitant ADJ JJ Degree=Pos _ _ _ _ 5 decrease decrease NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 11 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 binding binding VERB VBG VerbForm=Ger _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 17 long long ADJ JJ Degree=Pos _ _ _ _ 18 terminal terminal NOUN NN Number=Sing _ _ _ _ 19 repeat repeat VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 20 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 11949 # text = The second was to suppress the permanent NF-kappaB translocation induced by HIV-1 replication itself in chronically infected U937 cells, using a specific proteasome inhibitor (Z-LLL-H). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 second second NOUN NN Number=Sing _ _ _ _ 3 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 permanent permanent ADJ JJ Degree=Pos _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 11 translocation translocation NOUN NN Number=Sing _ _ _ _ 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 replication replication NOUN NN Number=Sing _ _ _ _ 18 itself itself PRON PRP Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 19 in in ADV RB _ _ _ _ _ 20 chronically chronically ADV RB _ _ _ _ _ 21 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 U937 U937 NUM CD NumType=Card _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 using use VERB VBG VerbForm=Ger _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 specific specific ADJ JJ Degree=Pos _ _ _ _ 28 proteasome proteasome NOUN NN Number=Sing _ _ _ _ 29 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 Z Z PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 LLL LLL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 H H PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 11950 # text = As early as 2 h after addition of the inhibitor to the culture medium, there was an inhibition of both constitutive activation of NF-kappaB and HIV-1 genome expression. 1 As as ADV RB _ _ _ _ _ 2 early early ADV RB Degree=Pos _ _ _ _ 3 as as SCONJ IN _ _ _ _ _ 4 2 2 NUM CD NumType=Card _ _ _ _ 5 h h NOUN NN Number=Sing _ _ _ _ 6 after after ADP IN _ _ _ _ _ 7 addition addition NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 culture culture NOUN NN Number=Sing _ _ _ _ 14 medium medium NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 there there PRON EX _ _ _ _ _ 17 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 both both DET DT _ _ _ _ _ 22 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 genome genome NOUN NN Number=Sing _ _ _ _ 33 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 11951 # text = The third approach was to monitor the replication competence in U937 cells of an infectious HIV-1 provirus carrying point mutations in the kappaB-responsive elements of both long terminal repeats. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 third third ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 approach approach NOUN NN Number=Sing _ _ _ _ 4 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 monitor monitor VERB VB VerbForm=Inf _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 replication replication NOUN NN Number=Sing _ _ _ _ 9 competence competence NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 U937 U937 NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 infectious infectious ADJ JJ Degree=Pos _ _ _ _ 16 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 provirus provirus NOUN NN Number=Sing _ _ _ _ 20 carrying carry VERB VBG VerbForm=Ger _ _ _ _ 21 point point NOUN NN Number=Sing _ _ _ _ 22 mutations mutation NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 28 elements element NOUN NNS Number=Plur _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 both both DET DT _ _ _ _ _ 31 long long ADJ JJ Degree=Pos _ _ _ _ 32 terminal terminal NOUN NN Number=Sing _ _ _ _ 33 repeats repeat NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 11952 # text = Compared with its wild-type counterpart, this mutated provirus showed a profoundly decreased, Z-LLL-H-insensitive transcriptional and replicative activity in U937 monocytes. 1 Compared compare VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 4 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 type type NOUN NN Number=Sing _ _ _ _ 7 counterpart counterpart NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 10 mutated mutated VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 provirus provirus CCONJ CC _ _ _ _ _ 12 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 profoundly profoundly ADV RB _ _ _ _ _ 15 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 Z Z PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 LLL LLL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 H H PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 insensitive insensitive ADJ JJ Degree=Pos _ _ _ _ 24 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 replicative replicative ADJ JJ Degree=Pos _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 U937 U937 NUM CD NumType=Card _ _ _ _ 30 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11953 # text = Together, our results indicate that occupancy of the viral enhancer by NF-kappaB (p50/p65) heterodimers is required for ongoing transcription of integrated HIV provirus in monocytes, even in cells chronically infected and permanently producing functional HIV Tat protein. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 occupancy occupancy NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 viral viral ADJ JJ Degree=Pos _ _ _ _ 11 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 / / SYM SYM _ _ _ _ SpaceAfter=No 19 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 heterodimers heterodimers NOUN NNS Number=Plur _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 ongoing ongoing ADJ JJ Degree=Pos _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 integrated integrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 HIV Hiv NOUN NN Number=Sing _ _ _ _ 30 provirus provirus NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 even even ADV RB _ _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ _ 37 chronically chronically ADV RB _ _ _ _ _ 38 infected infect ADJ JJ Degree=Pos _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 permanently permanently ADV RB _ _ _ _ _ 41 producing produce VERB VBG VerbForm=Ger _ _ _ _ 42 functional functional ADJ JJ Degree=Pos _ _ _ _ 43 HIV HIV PROPN NNP Number=Sing _ _ _ _ 44 Tat Tat PROPN NNP Number=Sing _ _ _ _ 45 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 11954 # text = Thus, the ability of HIV-1 replication to activate NF-kappaB is crucial to the intense self-perpetuated viral transcription observed in cells of the monocytic lineage. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 ability ability NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 replication replication NOUN NN Number=Sing _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 activate activate VERB VB VerbForm=Inf _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 intense intense ADJ JJ Degree=Pos _ _ _ _ 20 self self NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 perpetuated perpetuate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 viral viral ADJ JJ Degree=Pos _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 31 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11955 # text = Document 0030012763 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012763 0030012763 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11956 # text = Efficient transcription and replication of simian immunodeficiency virus in the absence of NF-kappaB and Sp1 binding elements. 1 Efficient efficient ADJ JJ Degree=Pos _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 replication replication NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 simian simian ADJ JJ Degree=Pos _ _ _ _ 7 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 8 virus virus NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 absence absence NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 18 binding binding VERB VBG VerbForm=Ger _ _ _ _ 19 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11957 # text = Ten mutants of the simian immunodeficiency virus (SIV) SIVmac239 bearing deletions (delta) or substitutions (subst) in the NF-kappaB and/or Sp1 binding elements were created, and the replicative capacities of the mutants were analyzed. 1 Ten ten NUM CD NumType=Card _ _ _ _ 2 mutants mutant NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 simian simian ADJ JJ Degree=Pos _ _ _ _ 6 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 7 virus virus NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 SIV SIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 SIVmac239 SIVmac239 NUM CD NumType=Card _ _ _ _ 12 bearing bearing NOUN NN Number=Sing _ _ _ _ 13 deletions deletion NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 delta delta NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 substitutions substitution NOUN NNS Number=Plur _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 subst subst ADJ JJS Degree=Sup _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ SpaceAfter=No 28 / / PUNCT , _ _ _ _ SpaceAfter=No 29 or or CCONJ CC _ _ _ _ _ 30 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 31 binding binding VERB VBG VerbForm=Ger _ _ _ _ 32 elements element NOUN NNS Number=Plur _ _ _ _ 33 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 created create VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 replicative replicative ADJ JJ Degree=Pos _ _ _ _ 39 capacities capacitie NOUN NNS Number=Plur _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 mutants mutant NOUN NNS Number=Plur _ _ _ _ 43 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 44 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 11958 # text = All mutants, including one extensively mutagenized strain entirely missing the NF-kappaB and four Spl binding elements, replicated with wild-type kinetics and to a wild-type level in peripheral blood mononuclear cell cultures in 50 to 100% of the experiments. 1 All all DET DT _ _ _ _ _ 2 mutants mutant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 including include VERB VBG VerbForm=Ger _ _ _ _ 5 one one NUM CD NumType=Card _ _ _ _ 6 extensively extensively ADV RB _ _ _ _ _ 7 mutagenized mutagenize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 strain strain NOUN NN Number=Sing _ _ _ _ 9 entirely entirely ADV RB _ _ _ _ _ 10 missing miss VERB VBG VerbForm=Ger _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 four four NUM CD NumType=Card _ _ _ _ 17 Spl Spl NOUN NN Number=Sing _ _ _ _ 18 binding binding VERB VBG VerbForm=Ger _ _ _ _ 19 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 replicated replicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 type type NOUN NN Number=Sing _ _ _ _ 26 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 type type NOUN NN Number=Sing _ _ _ _ 33 level level NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 36 blood blood NOUN NN Number=Sing _ _ _ _ 37 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 cultures culture NOUN NNS Number=Plur _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 50 50 NUM CD NumType=Card _ _ _ _ 42 to to ADP IN _ _ _ _ _ 43 100 100 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 % % SYM NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 11959 # text = One group of mutants replicated very similarly to SIVmac239 in kinetics and yield in CEMxl74 cells (2xNFKappaB > 1 One one NUM CD NumType=Card _ _ _ _ 2 group group NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 mutants mutant NOUN NNS Number=Plur _ _ _ _ 5 replicated replicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 very very ADV RB _ _ _ _ _ 7 similarly similarly ADV RB _ _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 SIVmac239 SIVmac239 PROPN NNP Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 yield yield VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 CEMxl74 CEMxl74 PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 2xNFKappaB 2xNFKappaB NOUN NN Number=Sing _ _ _ _ 19 > > PUNCT -RRB- _ _ _ _ _ # sent_id = 11960 # text = or = SlVmac239 approximately deltaNFkappaB approximately deltaSpl234 approximately substNFkappaB approximately substSpl2 approximately substSp23), while a second group replicated with delayed or slightly delayed kinetics in CEMxl74 cells (SIVmac239 > substSp34 > deltaNFkappaBdeltaSpl234 approximately deltaNFkappaBdeltaSp1 > substSpl234). 1 or or CCONJ CC _ _ _ _ _ 2 = = SYM SYM _ _ _ _ _ 3 SlVmac239 SlVmac239 NUM CD NumType=Card _ _ _ _ 4 approximately approximately ADV RB _ _ _ _ _ 5 deltaNFkappaB deltaNFkappaB VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 approximately approximately ADV RB _ _ _ _ _ 7 deltaSpl234 deltaSpl234 NUM CD NumType=Card _ _ _ _ 8 approximately approximately ADV RB _ _ _ _ _ 9 substNFkappaB substNFkappaB VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 approximately approximately ADV RB _ _ _ _ _ 11 substSpl2 substSpl2 NUM CD NumType=Card _ _ _ _ 12 approximately approximately ADV RB _ _ _ _ _ 13 substSp23 substSp23 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 while while SCONJ IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 19 group group NOUN NN Number=Sing _ _ _ _ 20 replicated replicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 delayed delay ADJ JJ Degree=Pos _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 slightly slightly ADV RB _ _ _ _ _ 25 delayed delayed VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 CEMxl74 CEMxl74 PROPN NNP Number=Sing _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 SIVmac239 SIVmac239 NUM CD NumType=Card _ _ _ _ 32 > > SYM NFP _ _ _ _ _ 33 substSp34 substSp34 NUM CD NumType=Card _ _ _ _ 34 > > SYM NFP _ _ _ _ _ 35 deltaNFkappaBdeltaSpl234 deltaNFkappaBdeltaSpl234 NUM CD NumType=Card _ _ _ _ 36 approximately approximately ADV RB _ _ _ _ _ 37 deltaNFkappaBdeltaSp1 deltaNFkappaBdeltaSp1 NUM CD NumType=Card _ _ _ _ 38 > > PUNCT -RRB- _ _ _ _ _ 39 substSpl234 substSpl234 NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 11961 # text = Reversions or additional mutations were not detected in the U3 and R regions of proviral DNA from CEMxl74 cells infected with the SIVmac239 mutants. 1 Reversions Reversion NOUN NNS Number=Plur _ _ _ _ 2 or or CCONJ CC _ _ _ _ _ 3 additional additional ADJ JJ Degree=Pos _ _ _ _ 4 mutations mutation NOUN NNS Number=Plur _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 U3 U3 NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 R be ADJ JJR Degree=Cmp _ _ _ _ 13 regions region NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 proviral proviral ADJ JJ Degree=Pos _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 CEMxl74 CEMxl74 NUM CD NumType=Card _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 SIVmac239 Sivmac239 NOUN NN Number=Sing _ _ _ _ 24 mutants mutant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 11962 # text = Similar results were obtained when mutants of SIVmacMER (a macrophage-competent derivative of SIVmac239) were tested in peripheral blood mononuclear cell and CEMx174 cultures. 1 Similar similar ADJ JJ Degree=Pos _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 obtained obtain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 when when ADV WRB PronType=Int _ _ _ _ 6 mutants mutant NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 SIVmacMER SIVmacMER PROPN NNP Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 macrophage macrophage NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 competent competent ADJ JJ Degree=Pos _ _ _ _ 14 derivative derivative NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 SIVmac239 SIVmac239 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 tested test VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 22 blood blood NOUN NN Number=Sing _ _ _ _ 23 mononuclear mononuclear NOUN NN Number=Sing _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 CEMx CEMx SYM SYM _ _ _ _ SpaceAfter=No 27 174 174 NUM CD NumType=Card _ _ _ _ 28 cultures culture NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 11963 # text = However, the growth of most mutated viruses was suppressed in primary rhesus monkey alveolar macrophages (SIVmacMER approximately 2xNFkappaB approximately substNFkappaB > deltaNFkappaB > deltaNFkappaBdeltaSpl234 approximately deltaNFkappaBdeltaSpl > deltaSpl234 approximately substSpl2 > substSp23 approximately substSp34 approximately substSpl234 > or = SIVmac239). 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 growth growth NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 most most ADJ JJS Degree=Sup _ _ _ _ 7 mutated mutate ADJ JJ Degree=Pos _ _ _ _ 8 viruses viruse NOUN NNS Number=Plur _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 primary primary ADJ JJ Degree=Pos _ _ _ _ 13 rhesus rhesus NOUN NN Number=Sing _ _ _ _ 14 monkey monkey NOUN NN Number=Sing _ _ _ _ 15 alveolar alveolar NOUN NN Number=Sing _ _ _ _ 16 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 SIVmacMER Sivmacmer ADV RB _ _ _ _ _ 19 approximately approximately ADV RB _ _ _ _ _ 20 2xNFkappaB 2xNFkappaB ADV RB _ _ _ _ _ 21 approximately approximately ADV RB _ _ _ _ _ 22 substNFkappaB substNFkappaB ADV RB _ _ _ _ _ 23 > > PUNCT , _ _ _ _ _ 24 deltaNFkappaB deltaNFkappaB NOUN NN Number=Sing _ _ _ _ 25 > > PUNCT , _ _ _ _ _ 26 deltaNFkappaBdeltaSpl234 deltaNFkappaBdeltaSpl234 NUM CD NumType=Card _ _ _ _ 27 approximately approximately ADV RB _ _ _ _ _ 28 deltaNFkappaBdeltaSpl deltaNFkappaBdeltaSpl NOUN NN Number=Sing _ _ _ _ 29 > > PUNCT -RRB- _ _ _ _ _ 30 deltaSpl234 deltaSpl234 NUM CD NumType=Card _ _ _ _ 31 approximately approximately ADV RB _ _ _ _ _ 32 substSpl2 substSpl2 NUM CD NumType=Card _ _ _ _ 33 > > SYM NFP _ _ _ _ _ 34 substSp23 substSp23 NUM CD NumType=Card _ _ _ _ 35 approximately approximately ADV RB _ _ _ _ _ 36 substSp substsp NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 34 34 NUM CD NumType=Card _ _ _ _ 38 approximately approximately ADV RB _ _ _ _ _ 39 substSpl234 substSpl234 NUM CD NumType=Card _ _ _ _ 40 > > PUNCT , _ _ _ _ _ 41 or or CCONJ CC _ _ _ _ _ 42 = = SYM SYM _ _ _ _ _ 43 SIVmac239 SIVmac239 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 11964 # text = Thus, changes in the Sp1 binding sites had the most dramatic effects on SIVmac replication in primary macrophage cultures. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 changes change NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 Sp1 Sp1 NOUN NN Number=Sing _ _ _ _ 7 binding binding VERB VBG VerbForm=Ger _ _ _ _ 8 sites site NOUN NNS Number=Plur _ _ _ _ 9 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 most most ADV RBS _ _ _ _ _ 12 dramatic dramatic ADJ JJ Degree=Pos _ _ _ _ 13 effects effect NOUN NNS Number=Plur _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 SIVmac SIVmac PROPN NNP Number=Sing _ _ _ _ 16 replication replication NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 primary primary ADJ JJ Degree=Pos _ _ _ _ 19 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 20 cultures culture NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 11965 # text = Analysis of long terminal repeat-driven secreted alkaline phosphatase activity in transient assays showed that, unlike human immunodeficiency virus type 1, the SIV long terminal repeat possesses an enhancer region just upstream of the NF-kappaB element which maintains significant levels of basal transcription in the absence of NF-kappaB and Sp1 sites. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 long long ADJ JJ Degree=Pos _ _ _ _ 4 terminal terminal NOUN NN Number=Sing _ _ _ _ 5 repeat repeat VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 6 - - PUNCT : _ _ _ _ SpaceAfter=No 7 driven driven VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 secreted secret VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 alkaline alkaline NOUN NN Number=Sing _ _ _ _ 10 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 transient transient ADJ JJ Degree=Pos _ _ _ _ 14 assays assay NOUN NNS Number=Plur _ _ _ _ 15 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 unlike unlike ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 21 virus virus NOUN NN Number=Sing _ _ _ _ 22 type type NOUN NN Number=Sing _ _ _ _ 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 SIV SIV PROPN NNP Number=Sing _ _ _ _ 27 long long ADJ JJ Degree=Pos _ _ _ _ 28 terminal terminal NOUN NN Number=Sing _ _ _ _ 29 repeat repeat VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 possesses possess NOUN NNS Number=Plur _ _ _ _ 31 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 33 region region NOUN NN Number=Sing _ _ _ _ 34 just just ADV RB _ _ _ _ _ 35 upstream upstream NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 41 element element NOUN NN Number=Sing _ _ _ _ 42 which which PRON WDT PronType=Rel _ _ _ _ 43 maintains maintain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 44 significant significant ADJ JJ Degree=Pos _ _ _ _ 45 levels level NOUN NNS Number=Plur _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 basal basal ADJ JJ Degree=Pos _ _ _ _ 48 transcription transcription NOUN NN Number=Sing _ _ _ _ 49 in in ADP IN _ _ _ _ _ 50 the the DET DT Definite=Def|PronType=Art _ _ _ _ 51 absence absence NOUN NN Number=Sing _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 56 and and CCONJ CC _ _ _ _ _ 57 Sp1 Sp1 NUM CD NumType=Card _ _ _ _ 58 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 11966 # text = This region is responsive to transactivation by Tat. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 region region NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 transactivation transactivation VERB VB VerbForm=Inf _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 Tat Tat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 11967 # text = In addition, the SIV TATA box was shown to be stronger than that of human immunodeficiency virus type 1. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 SIV SIV PROPN NNP Number=Sing _ _ _ _ 6 TATA TATa PROPN NNP Number=Sing _ _ _ _ 7 box box NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 stronger stronger ADJ JJR Degree=Cmp _ _ _ _ 13 than than ADP IN _ _ _ _ _ 14 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 18 virus virus NOUN NN Number=Sing _ _ _ _ 19 type type NOUN NN Number=Sing _ _ _ _ 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 11968 # text = Therefore, the surprisingly high replicative capacity of NF-kappaB and Sp1 binding site mutants of SIVmac is due to unique features or the enhancer/promoter region. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 surprisingly surprisingly ADV RB _ _ _ _ _ 5 high high ADJ JJ Degree=Pos _ _ _ _ 6 replicative replicative ADJ JJ Degree=Pos _ _ _ _ 7 capacity capacity NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 14 binding bind VERB VBG VerbForm=Ger _ _ _ _ 15 site site NOUN NN Number=Sing _ _ _ _ 16 mutants mutant NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 SIVmac SIVmac PROPN NNP Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 due due ADP IN _ _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 unique unique ADJ JJ Degree=Pos _ _ _ _ 23 features feature NOUN NNS Number=Plur _ _ _ _ 24 or or CCONJ CC _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 / / PUNCT , _ _ _ _ SpaceAfter=No 28 promoter promoter NOUN NN Number=Sing _ _ _ _ 29 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11969 # text = Document 0030012767 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012767 0030012767 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11970 # text = Regulation of interleukin-2 receptor alpha chain expression and nuclear factor.kappa B activation by protein kinase C in T lymphocytes. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 chain chain NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 factor.kappa factor.kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 kinase kinase NOUN NN Number=Sing _ _ _ _ 18 C C PROPN NNP Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 T T PROPN NNP Number=Sing _ _ _ _ 21 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 11971 # text = Autocrine role of tumor necrosis factor alpha. 1 Autocrine Autocrine PROPN NNP Number=Sing _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 tumor tumor NOUN NN Number=Sing _ _ _ _ 5 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11972 # text = The regulation of interleukin-2 receptor alpha chain (IL-2R alpha) expression and nuclear factor (NF) activation by protein kinase C (PKC) in resting T cells, has been studied. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 alpha alpha NOUN NN Number=Sing _ _ _ _ 9 chain chain NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2R 2r NOUN NN Number=Sing _ _ _ _ 14 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ _ 26 kinase kinase NOUN NN Number=Sing _ _ _ _ 27 C C PROPN NNP Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 in in SCONJ IN _ _ _ _ _ 32 resting rest VERB VBG VerbForm=Ger _ _ _ _ 33 T t PROPN NNP Number=Sing _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 38 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 11973 # text = Treatment of human resting T cells with phorbol esters strongly induced the expression of IL-2R alpha and the activation of NF.kappa B. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 resting rest VERB VBG VerbForm=Ger _ _ _ _ 5 T t PROPN NNP Number=Sing _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 9 esters ester NOUN NNS Number=Plur _ _ _ _ 10 strongly strongly ADV RB _ _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2R 2R PROPN NNP Number=Sing _ _ _ _ 18 alpha alpha PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 NF.kappa NF.kappa PROPN NNP Number=Sing _ _ _ _ 24 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 11974 # text = This activation was due to the translocation of p65 and c-Rel NF.kappa B proteins from cytoplasmic stores to the nucleus, where they bound the kappa B sequence of the IL-2R alpha promoter either as p50.p65 or as p50.c-Rel heterodimers. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 due due ADP IN _ _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 translocation translocation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 p65 p65 NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 Rel Rel PROPN NNP Number=Sing _ _ _ _ 14 NF.kappa NF.kappa PROPN NNP Number=Sing _ _ _ _ 15 B B ADJ JJ Degree=Pos _ _ _ _ 16 proteins protein NOUN NNS Number=Plur _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 19 stores store NOUN NNS Number=Plur _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 where where ADV WRB PronType=Rel _ _ _ _ 25 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 26 bound bound VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 sequence sequence NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 2R 2r PROPN NNP Number=Sing _ _ _ _ 36 alpha alpha NOUN NN Number=Sing _ _ _ _ 37 promoter promoter NOUN NN Number=Sing _ _ _ _ 38 either either CCONJ CC _ _ _ _ _ 39 as as ADP IN _ _ _ _ _ 40 p50.p65 p50.p65 NUM CD NumType=Card _ _ _ _ 41 or or CCONJ CC _ _ _ _ _ 42 as as ADP IN _ _ _ _ _ 43 p50.c p50.c ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 Rel Rel NOUN NN Number=Sing _ _ _ _ 46 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 11975 # text = Interestingly, all of those events were largely indirect and mediated by endogenously secreted tumor necrosis factor alpha (TNF alpha), as they were strongly inhibited by a neutralizing anti-TNF alpha monoclonal antibody. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 all all DET DT _ _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 those those DET DT Number=Plur|PronType=Dem _ _ _ _ 6 events event NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 largely largely ADV RB _ _ _ _ _ 9 indirect indirect ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 endogenously endogenously ADV RB _ _ _ _ _ 14 secreted secret VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 tumor tumor NOUN NN Number=Sing _ _ _ _ 16 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 alpha alpha NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 TNF Tnf NOUN NN Number=Sing _ _ _ _ 21 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 as as SCONJ IN _ _ _ _ _ 25 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 26 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 strongly strongly ADV RB _ _ _ _ _ 28 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 neutralizing neutralizing ADJ JJ Degree=Pos _ _ _ _ 32 anti-TNF anti-tnf NOUN NN Number=Sing _ _ _ _ 33 alpha alpha ADP IN _ _ _ _ _ 34 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 35 antibody antibody NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 11976 # text = Furthermore, cyclosporin A, which blocked TNF alpha production induced by PKC, strongly inhibited IL-2R alpha and NF.kappa B activation. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 cyclosporin cyclosporin ADP IN _ _ _ _ _ 4 A a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 TNF TNF PROPN NNP Number=Sing _ _ _ _ 9 alpha alpha ADP IN _ _ _ _ _ 10 production production NOUN NN Number=Sing _ _ _ _ 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 strongly strongly ADV RB _ _ _ _ _ 16 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2R 2r PROPN NNP Number=Sing _ _ _ _ 20 alpha alpha PROPN NNP Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 NF.kappa NF.kappa PROPN NNP Number=Sing _ _ _ _ 23 B B PROPN NNP Number=Sing _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 11977 # text = The addition of either TNF alpha or IL-2 partially recovered cyclosporin A-induced IL-2R alpha inhibition, but only TNF alpha completely recovered NF.kappa B activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 either either CCONJ CC _ _ _ _ _ 5 TNF TNF PROPN NNP Number=Sing _ _ _ _ 6 alpha alpha PROPN NNP Number=Sing _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 partially partially ADV RB _ _ _ _ _ 12 recovered recover VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 14 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2R 2r PROPN NNP Number=Sing _ _ _ _ 20 alpha alpha NOUN NN Number=Sing _ _ _ _ 21 inhibition inhibition NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 but but CCONJ CC _ _ _ _ _ 24 only only ADV RB _ _ _ _ _ 25 TNF Tnf PROPN NNP Number=Sing _ _ _ _ 26 alpha alpha PROPN NNP Number=Sing _ _ _ _ 27 completely completely ADV RB _ _ _ _ _ 28 recovered recover VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 NF.kappa NF.kappa PROPN NNP Number=Sing _ _ _ _ 30 B b PROPN NNP Number=Sing _ _ _ _ 31 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 11978 # text = Those results indicate that, in resting T cells, PKC activation has only a triggering role, whereas the endogenously secreted TNF alpha plays an essential role in the quantitative control of the expression of IL-2R alpha chain or NF.kappa B activation. 1 Those those DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 in in SCONJ IN _ _ _ _ _ 7 resting rest VERB VBG VerbForm=Ger _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 PKC PKC PROPN NNP Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 only only ADV RB _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 triggering triggering NOUN NN Number=Sing _ _ _ _ 17 role role NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 whereas whereas SCONJ IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 endogenously endogenously ADV RB _ _ _ _ _ 22 secreted secret ADJ JJ Degree=Pos _ _ _ _ 23 TNF Tnf NOUN NN Number=Sing _ _ _ _ 24 alpha alpha NOUN NN Number=Sing _ _ _ _ 25 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 essential essential ADJ JJ Degree=Pos _ _ _ _ 28 role role NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 quantitative quantitative ADJ JJ Degree=Pos _ _ _ _ 32 control control NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 2R 2R PROPN NNP Number=Sing _ _ _ _ 40 alpha alpha NOUN NN Number=Sing _ _ _ _ 41 chain chain NOUN NN Number=Sing _ _ _ _ 42 or or CCONJ CC _ _ _ _ _ 43 NF.kappa NF.kappa PROPN NNP Number=Sing _ _ _ _ 44 B b PROPN NNP Number=Sing _ _ _ _ 45 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11979 # text = Document 0030012769 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012769 0030012769 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11980 # text = Octamer binding factors and their coactivator can activate the murine PU.1 (spi-1) promoter. 1 Octamer Octamer PROPN NNP Number=Sing _ _ _ _ 2 binding bind VERB VBG VerbForm=Ger _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 6 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 7 can can AUX MD VerbForm=Fin _ _ _ _ 8 activate activate VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 murine murine NOUN NN Number=Sing _ _ _ _ 11 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 spi spi NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11981 # text = PU.1 (spi-1), a member of the Ets transcription factor family, is predominantly expressed in myeloid and B cells, activates many B cell and myeloid genes, and is critical for development of both of these lineages. 1 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 spi spi NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 member member NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 Ets Ets PROPN NNPS Number=Plur _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 predominantly predominantly ADV RB _ _ _ _ _ 18 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 B b ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 many many ADJ JJ Degree=Pos _ _ _ _ 27 B b ADJ JJ Degree=Pos _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 myeloid myeloid NOUN NN Number=Sing _ _ _ _ 31 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 critical critical ADJ JJ Degree=Pos _ _ _ _ 36 for for ADP IN _ _ _ _ _ 37 development development NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 both both DET DT _ _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 42 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 11982 # text = Our previous studies (Chen, H.M., Ray-Gallet, D., Zhang, P., Hetherington, C.J., Gonzalez, D.A., Zhang, D.-E., Moreau-Gachelin, F., and Tenen, D.G.(1995) Oncogene 11, 1549-1560) demonstrate that the PU.1 promoter directs cell type-specific reporter gene expression in myeloid cell lines, and that PU.1 activates its own promoter in an autoregulatory loop. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 previous previous ADJ JJ Degree=Pos _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 Chen Chen PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 H.M. H.M. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 Ray Ray PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 Gallet Gallet PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 D. D. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 Zhang Zhang PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 P. P. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 Hetherington Hetherington PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 C.J. C.J. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 Gonzalez Gonzalez PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 D.A. D.A. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 Zhang Zhang PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 D.-E. D.-E. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 Moreau-Gachelin Moreau-Gachelin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 F. F. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 Tenen Tenen PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 D.G. D.G. PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 1995 1995 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 Oncogene Oncogene NOUN NN Number=Sing _ _ _ _ 43 11 11 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 1549 1549 NUM CD NumType=Card _ _ _ SpaceAfter=No 46 - - SYM SYM _ _ _ _ SpaceAfter=No 47 1560 1560 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ _ 49 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 50 that that SCONJ IN _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 53 promoter promoter NOUN NN Number=Sing _ _ _ _ 54 directs directs NOUN NNS Number=Plur _ _ _ _ 55 cell cell VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 56 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 specific specific ADJ JJ Degree=Pos _ _ _ _ 59 reporter reporter NOUN NN Number=Sing _ _ _ _ 60 gene gene NOUN NN Number=Sing _ _ _ _ 61 expression expression NOUN NN Number=Sing _ _ _ _ 62 in in ADP IN _ _ _ _ _ 63 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 64 cell cell NOUN NN Number=Sing _ _ _ _ 65 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 66 , , PUNCT , _ _ _ _ _ 67 and and CCONJ CC _ _ _ _ _ 68 that that SCONJ IN _ _ _ _ _ 69 PU.1 Pu.1 PROPN NNP Number=Sing _ _ _ _ 70 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 71 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 72 own own ADJ JJ Degree=Pos _ _ _ _ 73 promoter promoter NOUN NN Number=Sing _ _ _ _ 74 in in ADP IN _ _ _ _ _ 75 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 76 autoregulatory autoregulatory ADJ JJ Degree=Pos _ _ _ _ 77 loop loop NOUN NN Number=Sing _ _ _ SpaceAfter=No 78 . . PUNCT . _ _ _ _ _ # sent_id = 11983 # text = Here we show that the murine PU.1 promoter is also specifically and highly functional in B cell lines as well. Oct-1 and Oct-2 can bind specifically to a site at base pair -55 in vitro, and this site is specifically protected in B cells in vivo. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 murine murine NOUN NN Number=Sing _ _ _ _ 7 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 also also ADV RB _ _ _ _ _ 11 specifically specifically ADV RB _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 highly highly ADV RB _ _ _ _ _ 14 functional functional ADJ JJ Degree=Pos _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 B b ADJ JJ Degree=Pos _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 lines line NOUN NNS Number=Plur _ _ _ _ 19 as as ADV RB _ _ _ _ _ 20 well well ADV RB Degree=Pos _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ 22 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 -1 -1 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ _ 28 can can AUX MD VerbForm=Fin _ _ _ _ 29 bind bind VERB VB VerbForm=Inf _ _ _ _ 30 specifically specifically ADV RB _ _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 site site NOUN NN Number=Sing _ _ _ _ 34 at at ADP IN _ _ _ _ _ 35 base base NOUN NN Number=Sing _ _ _ _ 36 pair pair NOUN NN Number=Sing _ _ _ _ 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 55 55 NUM CD NumType=Card _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 44 site site NOUN NN Number=Sing _ _ _ _ 45 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 46 specifically specifically ADV RB _ _ _ _ _ 47 protected protect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 B b ADJ JJ Degree=Pos _ _ _ _ 50 cells cell NOUN NNS Number=Plur _ _ _ _ 51 in in ADP IN _ _ _ _ _ 52 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 11984 # text = We also demonstrate that two other sites contribute to promoter activity in B cells; an Sp1 binding site adjacent to the octamer site, and the PU.1 autoregulatory site. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 two two NUM CD NumType=Card _ _ _ _ 6 other other ADJ JJ Degree=Pos _ _ _ _ 7 sites site NOUN NNS Number=Plur _ _ _ _ 8 contribute contribute VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 promoter promoter VERB VB VerbForm=Inf _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 B b ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 ; ; PUNCT , _ _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 site site NOUN NN Number=Sing _ _ _ _ 20 adjacent adjacent NOUN NN Number=Sing _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 octamer octamer NOUN NN Number=Sing _ _ _ _ 24 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 PU.1 Pu.1 PROPN NNP Number=Sing _ _ _ _ 29 autoregulatory autoregulatory ADJ JJ Degree=Pos _ _ _ _ 30 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11985 # text = Finally, we show that the B cell coactivator OBF-1/Bob1/OCA-B is only expressed in B cells and not in myeloid cells, and that OBF-1/Bob1/OCA-B can transactivate the PU.1 promoter in HeLa and myeloid cells. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 10 OBF OBF NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 -1/Bob1/ -1/Bob1ith PUNCT HYPH _ _ _ _ SpaceAfter=No 12 OCA Oca NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 B b NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 only only ADV RB _ _ _ _ _ 17 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 B b ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 that that SCONJ IN _ _ _ _ _ 29 OBF OBF NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 -1/ -1ith PUNCT HYPH _ _ _ _ SpaceAfter=No 31 Bob1/OCA Bob1/OCa NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 B b NOUN NN Number=Sing _ _ _ _ 34 can can AUX MD VerbForm=Fin _ _ _ _ 35 transactivate transactivate VERB VB VerbForm=Inf _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ _ 38 promoter promoter NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 11986 # text = This B cell restricted coactivator may be responsible for the B cell specific expression of PU.1 mediated by the octamer site. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 B b ADJ JJ Degree=Pos _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 6 may may AUX MD VerbForm=Fin _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 B b ADJ JJ Degree=Pos _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 PU.1 PU.1 PROPN NNP Number=Sing _ _ _ _ 17 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 octamer octamer ADJ JJ Degree=Pos _ _ _ _ 21 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 11987 # text = Document 0030012770 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012770 0030012770 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 11988 # text = An interferon-gamma activation sequence mediates the transcriptional regulation of the IgG Fc receptor type IC gene by interferon-gamma. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 gamma gamma NOUN NN Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 sequence sequence NOUN NN Number=Sing _ _ _ _ 7 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 10 regulation regulation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 IgG IgG PROPN NNP Number=Sing _ _ _ _ 14 Fc Fc PROPN NNP Number=Sing _ _ _ _ 15 receptor receptor NOUN NN Number=Sing _ _ _ _ 16 type type NOUN NN Number=Sing _ _ _ _ 17 IC Ic PROPN NNP Number=Sing _ _ _ _ 18 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 11989 # text = Expression of the IgG Fc receptor type I (Fc gamma RI) on myeloid cells is dramatically increased by treatment with interferon-gamma (IFN-gamma). 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 IgG IgG PROPN NNP Number=Sing _ _ _ _ 5 Fc Fc PROPN NNP Number=Sing _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 type type NOUN NN Number=Sing _ _ _ _ 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 Fc Fc PROPN NNP Number=Sing _ _ _ _ 11 gamma gamma PROPN NNP Number=Sing _ _ _ _ 12 RI RI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 dramatically dramatically ADV RB _ _ _ _ _ 19 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 treatment treatment NOUN NN Number=Sing _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 gamma gamma NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 11990 # text = We observed that Fc gamma RI transcript levels in monoblast-like U937 cells were elevated within 3 hr and peaked 12 hr after exposure to IFN-gamma. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 Fc Fc PROPN NNP Number=Sing _ _ _ _ 5 gamma gamma PROPN NNP Number=Sing _ _ _ _ 6 RI RI PROPN NNP Number=Sing _ _ _ _ 7 transcript transcript VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 monoblast monoblast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 like like ADJ JJ Degree=Pos _ _ _ _ 13 U937 U937 NUM CD NumType=Card _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 elevated elevate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 within within ADP IN _ _ _ _ _ 18 3 3 NUM CD NumType=Card _ _ _ _ 19 hr hr NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 peaked peake VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 12 12 NUM CD NumType=Card _ _ _ _ 23 hr hr NOUN NN Number=Sing _ _ _ _ 24 after after ADP IN _ _ _ _ _ 25 exposure exposure NOUN NN Number=Sing _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 gamma gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 11991 # text = Treatment of U937 with IFN-gamma for 9 hr in the presence of cycloheximide led to super-induction of Fc gamma RI expression. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 U937 U937 NOUN NN Number=Sing _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 gamma gamma NOUN NN Number=Sing _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 9 9 NUM CD NumType=Card _ _ _ _ 10 hr hr NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 presence presence NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ _ 16 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 super super ADV RB _ _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 induction induction NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 Fc Fc PROPN NNP Number=Sing _ _ _ _ 23 gamma gamma PROPN NNP Number=Sing _ _ _ _ 24 RI RI PROPN NNP Number=Sing _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11992 # text = Nuclear run-on analysis revealed that the rate of Fc gamma RI transcription was increased by IFN-gamma. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 run run NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 on on ADJ JJ Degree=Pos _ _ _ _ 5 analysis analysis NOUN NN Number=Sing _ _ _ _ 6 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 rate rate NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 Fc Fc PROPN NNP Number=Sing _ _ _ _ 12 gamma gamma PROPN NNP Number=Sing _ _ _ _ 13 RI RI PROPN NNP Number=Sing _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 gamma gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 11993 # text = Genomic sequence upstream of the Fc gamma RIC gene was cloned and subjected to primer extension analysis, which demonstrated a single transcription initiation site without a TATA box. 1 Genomic Genomic ADJ JJ Degree=Pos _ _ _ _ 2 sequence sequence NOUN NN Number=Sing _ _ _ _ 3 upstream upstream NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 Fc Fc PROPN NNP Number=Sing _ _ _ _ 7 gamma gamma PROPN NNP Number=Sing _ _ _ _ 8 RIC Ric PROPN NNP Number=Sing _ _ _ _ 9 gene gene PROPN NNP Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 cloned clon VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 subjected subject VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 primer primer NOUN NN Number=Sing _ _ _ _ 16 extension extension NOUN NN Number=Sing _ _ _ _ 17 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 single single ADJ JJ Degree=Pos _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 initiation initiation NOUN NN Number=Sing _ _ _ _ 25 site site NOUN NN Number=Sing _ _ _ _ 26 without without ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 TATA TATa NOUN NN Number=Sing _ _ _ _ 29 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 11994 # text = Transient transfections of CAT reporter gene constructs containing various Fc gamma RIC promoter sequences into U937 cells revealed that a 20-bp region surrounding the transcription start site (-7 to +13) was capable of mediating transcription initiation and that an IFN-gamma responsive element (GIRE) was present within 74 bp upstream of the transcription initiation site. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 transfections transfection NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 CAT cat ADJ JJ Degree=Pos _ _ _ _ 5 reporter reporter NOUN NN Number=Sing _ _ _ _ 6 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 constructs construct NOUN NNS Number=Plur _ _ _ _ 8 containing contain VERB VBG VerbForm=Ger _ _ _ _ 9 various various ADJ JJ Degree=Pos _ _ _ _ 10 Fc Fc PROPN NNP Number=Sing _ _ _ _ 11 gamma gamma PROPN NNP Number=Sing _ _ _ _ 12 RIC Ric PROPN NNP Number=Sing _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 sequences sequence NOUN NNS Number=Plur _ _ _ _ 15 into into ADP IN _ _ _ _ _ 16 U937 U937 NUM CD NumType=Card _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 bp bp NOUN NN Number=Sing _ _ _ _ 24 region region NOUN NN Number=Sing _ _ _ _ 25 surrounding surround VERB VBG VerbForm=Ger _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 start start NOUN NN Number=Sing _ _ _ _ 29 site site NOUN NN Number=Sing _ _ _ _ 30 (- (- PUNCT . _ _ _ _ SpaceAfter=No 31 7 7 NUM CD NumType=Card _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 +13 +13 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ _ 35 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 36 capable capable ADJ JJ Degree=Pos _ _ _ _ 37 of of SCONJ IN _ _ _ _ _ 38 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 39 transcription transcription NOUN NN Number=Sing _ _ _ _ 40 initiation initiation NOUN NN Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 43 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 44 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 gamma gamma NOUN NN Number=Sing _ _ _ _ 47 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 48 element element NOUN NN Number=Sing _ _ _ _ 49 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 50 GIRE GIRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ _ 52 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 53 present present ADJ JJ Degree=Pos _ _ _ _ 54 within within ADP IN _ _ _ _ _ 55 74 74 NUM CD NumType=Card _ _ _ _ 56 bp bp NOUN NN Number=Sing _ _ _ _ 57 upstream upstream NOUN NN Number=Sing _ _ _ _ 58 of of ADP IN _ _ _ _ _ 59 the the DET DT Definite=Def|PronType=Art _ _ _ _ 60 transcription transcription NOUN NN Number=Sing _ _ _ _ 61 initiation initiation NOUN NN Number=Sing _ _ _ _ 62 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 63 . . PUNCT . _ _ _ _ _ # sent_id = 11995 # text = A 17-bp sequence between positions -51 and -35 conferred IFN-gamma responsiveness on a heterologous promoter. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 17 17 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 bp bp NOUN NN Number=Sing _ _ _ _ 5 sequence sequence NOUN NN Number=Sing _ _ _ _ 6 between between ADP IN _ _ _ _ _ 7 positions position NOUN NNS Number=Plur _ _ _ _ 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 51 51 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 - - SYM SYM _ _ _ _ SpaceAfter=No 12 35 35 NUM CD NumType=Card _ _ _ _ 13 conferred confer VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 gamma gamma NOUN NN Number=Sing _ _ _ _ 17 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 11996 # text = Double-stranded GIRE sequence, but not a scrambled sequence, was specifically bound by nuclear proteins from IFN-gamma treated U937 cells. 1 Double double ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 stranded strand VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 GIRE Gire NOUN NN Number=Sing _ _ _ _ 5 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 but but CCONJ CC _ _ _ _ _ 8 not not ADV RB _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 scrambled scramble VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 specifically specifically ADV RB _ _ _ _ _ 15 bound bound ADJ JJ Degree=Pos _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 proteins protein NOUN NNS Number=Plur _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 gamma gamma NOUN NN Number=Sing _ _ _ _ 23 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 U937 U937 NUM CD NumType=Card _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 11997 # text = Gel shift experiments further showed that the STAT1 alpha protein bound to the Fc gamma RIC GIRE in response to IFN-gamma treatment of U937 cells. 1 Gel gel NOUN NN Number=Sing _ _ _ _ 2 shift shift NOUN NN Number=Sing _ _ _ _ 3 experiments experiment NOUN NNS Number=Plur _ _ _ _ 4 further further ADV RB _ _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 STAT1 stat1 NOUN NN Number=Sing _ _ _ _ 9 alpha alpha NOUN NN Number=Sing _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 bound bound ADJ JJ Degree=Pos _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 Fc Fc PROPN NNP Number=Sing _ _ _ _ 15 gamma gamma PROPN NNP Number=Sing _ _ _ _ 16 RIC Ric PROPN NNP Number=Sing _ _ _ _ 17 GIRE GIRE PROPN NNP Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 gamma gamma NOUN NN Number=Sing _ _ _ _ 24 treatment treatment NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 U937 U937 NUM CD NumType=Card _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 11998 # text = The Fc gamma RIC GIRE is homologous to the IFN-gamma activation sequence (GAS) of the guanylate binding protein and to X box elements of class II MHC genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Fc Fc PROPN NNP Number=Sing _ _ _ _ 3 gamma gamma PROPN NNP Number=Sing _ _ _ _ 4 RIC Ric PROPN NNP Number=Sing _ _ _ _ 5 GIRE GIRE PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 gamma gamma NOUN NN Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 sequence sequence NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 GAS gas PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 guanylate guanylate NOUN NN Number=Sing _ _ _ _ 21 binding bind VERB VBG VerbForm=Ger _ _ _ _ 22 protein protein NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 X x VERB VB VerbForm=Inf _ _ _ _ 26 box box NOUN NN Number=Sing _ _ _ _ 27 elements element NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 class class NOUN NN Number=Sing _ _ _ _ 30 II ii NUM CD NumType=Card _ _ _ _ 31 MHC MHC PROPN NNP Number=Sing _ _ _ _ 32 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 11999 # text = Our results demonstrate that transcriptional regulation of the Fc gamma RIC gene by IFN-gamma involves the binding of STAT1 alpha to a 17-bp GAS homology in the proximal promoter. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 6 regulation regulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 Fc Fc PROPN NNP Number=Sing _ _ _ _ 10 gamma gamma PROPN NNP Number=Sing _ _ _ _ 11 RIC Ric PROPN NNP Number=Sing _ _ _ _ 12 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 gamma gamma PROPN NNP Number=Sing _ _ _ _ 17 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 binding binding NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 STAT1 STAT1 NUM CD NumType=Card _ _ _ _ 22 alpha alpha NOUN NN Number=Sing _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 17 17 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 bp bp NOUN NN Number=Sing _ _ _ _ 28 GAS gas NOUN NN Number=Sing _ _ _ _ 29 homology homology NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 33 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12000 # text = Document 0030012790 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012790 0030012790 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12001 # text = Central nervous system-derived cells express a kappa B-binding activity that enhances human immunodeficiency virus type 1 transcription in vitro and facilitates TAR-independent transactivation by Tat. 1 Central Central ADJ JJ Degree=Pos _ _ _ _ 2 nervous nervous ADJ JJ Degree=Pos _ _ _ _ 3 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B- B- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 enhances enhance VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 17 virus virus NOUN NN Number=Sing _ _ _ _ 18 type type NOUN NN Number=Sing _ _ _ _ 19 1 1 NUM CD NumType=Card _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 vitro vitro NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 facilitates facilitate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 TAR Tar ADV RB Degree=Pos _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 independent independent ADJ JJ Degree=Pos _ _ _ _ 28 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 Tat Tat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12002 # text = The Tat protein of human immunodeficiency virus type 1 (HIV-1) is a potent activator of long terminal repeat-directed transcription. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Tat Tat PROPN NNP Number=Sing _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 7 virus virus NOUN NN Number=Sing _ _ _ _ 8 type type NOUN NN Number=Sing _ _ _ _ 9 1 1 NUM CD NumType=Card _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 X LS _ _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 potent potent NOUN NN Number=Sing _ _ _ _ 18 activator activator NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 long long ADJ JJ Degree=Pos _ _ _ _ 21 terminal terminal NOUN NN Number=Sing _ _ _ _ 22 repeat repeat VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 12003 # text = While in most cell types, activation requires interaction of Tat with the unusual transcription element TAR, astrocytic glial cells support TAR-independent transactivation of HIV-1 transcription by Tat. 1 While while SCONJ IN _ _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 most most ADJ JJS Degree=Sup _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 interaction interaction NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 Tat Tat PROPN NNP Number=Sing _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 unusual unusual ADJ JJ Degree=Pos _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 element element NOUN NN Number=Sing _ _ _ _ 17 TAR Tar NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 astrocytic astrocytic ADJ JJ Degree=Pos _ _ _ _ 20 glial glial ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 support support VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 TAR Tar ADV RB Degree=Pos _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 independent independent ADJ JJ Degree=Pos _ _ _ _ 26 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 Tat Tat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 12004 # text = This alternative pathway of Tat activation is mediated by the viral enhancer, a kappa B domain capable of binding the prototypical form of the transcription factor nuclear factor kappa B (NF-kappa B) present in many cell types, including T lymphocytes. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 3 pathway pathway NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Tat Tat NOUN NN Number=Sing _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 viral viral ADJ JJ Degree=Pos _ _ _ _ 12 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 domain domain NOUN NN Number=Sing _ _ _ _ 18 capable capable ADJ JJ Degree=Pos _ _ _ _ 19 of of SCONJ IN _ _ _ _ _ 20 binding bind VERB VBG VerbForm=Ger _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 prototypical prototypical ADJ JJ Degree=Pos _ _ _ _ 23 form form NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ _ 28 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 29 factor factor NOUN NN Number=Sing _ _ _ _ 30 kappa kappa NOUN NN Number=Sing _ _ _ _ 31 B b NOUN NN Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 kappa kappa NOUN NN Number=Sing _ _ _ _ 36 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 present present ADJ JJ Degree=Pos _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 many many ADJ JJ Degree=Pos _ _ _ _ 41 cell cell NOUN NN Number=Sing _ _ _ _ 42 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 including include VERB VBG VerbForm=Ger _ _ _ _ 45 T t PROPN NNP Number=Sing _ _ _ _ 46 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 12005 # text = Tat transactivation mediated by the kappa B domain is sufficient to allow replication of TAR-deleted mutant HIV-1 in astrocytes. 1 Tat Tat PROPN NNP Number=Sing _ _ _ _ 2 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 3 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 domain domain NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 allow allow VERB VB VerbForm=Inf _ _ _ _ 13 replication replication NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 TAR TAR ADV RB Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 deleted delet VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 19 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 astrocytes astrocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 12006 # text = The present study demonstrates the existence of kappa B-specific binding factors present in human glial astrocytes that differ from prototypical NF-kappa B. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 existence existence NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B- B- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 specific specific ADJ JJ Degree=Pos _ _ _ _ 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 present present ADJ JJ Degree=Pos _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 glial glial ADJ JJ Degree=Pos _ _ _ _ 17 astrocytes astrocyte NOUN NNS Number=Plur _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 differ differ VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 prototypical prototypical ADJ JJ Degree=Pos _ _ _ _ 22 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa NOUN NN Number=Sing _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 12007 # text = The novel astrocyte-derived kappa B-binding activity is retained on an HIV-1 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 novel novel NOUN NN Number=Sing _ _ _ _ 3 astrocyte astrocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B- B- PUNCT , _ _ _ _ SpaceAfter=No 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 retained retain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ # sent_id = 12008 # text = Tat affinity column, while prototypical NF-kappa B from Jurkat T cells is not. 1 Tat Tat VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 affinity affinity NOUN NN Number=Sing _ _ _ _ 3 column column NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 while while SCONJ IN _ _ _ _ _ 6 prototypical prototypical ADJ JJ Degree=Pos _ _ _ _ 7 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 13 T T PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 not not PART RB _ _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 12009 # text = In vitro transcription studies demonstrate that astrocyte-derived kappa B-binding factors activate transcription of the HIV-1 long terminal repeat and that this activation is dependent on the kappa B domain. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ _ 5 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 astrocyte astrocyte ADV RB _ _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B- B- PUNCT , _ _ _ _ SpaceAfter=No 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 factors factor NOUN NNS Number=Plur _ _ _ _ 14 activate activate ADJ JJ Degree=Pos _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 long long ADJ JJ Degree=Pos _ _ _ _ 22 terminal terminal NOUN NN Number=Sing _ _ _ _ 23 repeat repeat NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 30 on on ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 kappa kappa NOUN NN Number=Sing _ _ _ _ 33 B b NOUN NN Number=Sing _ _ _ _ 34 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 12010 # text = Moreover, TAR-independent transactivation of HIV-1 transcription is reproduced in vitro in an astrocyte factor-dependent manner which correlates with kappa B-binding activity. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 TAR TAR ADV RB _ _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 independent independent ADJ JJ Degree=Pos _ _ _ _ 6 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 reproduced reproduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 vitro vitro NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 astrocyte astrocyte ADJ JJ Degree=Pos _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 22 manner manner NOUN NN Number=Sing _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 kappa kappa NOUN NN Number=Sing _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 binding binding VERB VBG VerbForm=Ger _ _ _ _ 30 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 12011 # text = The importance of the central nervous system-enriched kappa B transcription factor in the regulation of HIV-1 expression is discussed. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 importance importance NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 central central ADJ JJ Degree=Pos _ _ _ _ 6 nervous nervous ADJ JJ Degree=Pos _ _ _ _ 7 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 enriched enrich VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 regulation regulation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 discussed discuss VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12012 # text = Document 0030012807 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012807 0030012807 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12013 # text = Binding of YY1 and Oct1 to a novel element that downregulates expression of IL-5 in human T cells. 1 Binding binding NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 YY1 YY1 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 Oct1 Oct1 NUM CD NumType=Card _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 novel novel NOUN NN Number=Sing _ _ _ _ 9 element element NOUN NN Number=Sing _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 downregulates downregulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 5 5 NUM CD NumType=Card _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12014 # text = BACKGROUND: IL-5 controls development of eosinophilia and has been shown to be involved in the pathogenesis of allergic diseases. 1 BACKGROUND background ADP IN _ _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 5 5 NUM CD NumType=Card _ _ _ _ 6 controls control NOUN NNS Number=Plur _ _ _ _ 7 development development NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 eosinophilia eosinophilia NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 13 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 involved involved VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 allergic allergic ADJ JJ Degree=Pos _ _ _ _ 22 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 12015 # text = In both atopic and nonatopic asthma, elevated IL-5 has been detected in peripheral blood and the airways. 1 In in ADP IN _ _ _ _ _ 2 both both DET DT _ _ _ _ _ 3 atopic atopic ADJ JJ Degree=Pos _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 nonatopic nonatopic ADJ JJ Degree=Pos _ _ _ _ 6 asthma asthma NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 5 5 NUM CD NumType=Card _ _ _ _ 12 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 14 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 17 blood blood NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 airways airway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 12016 # text = IL-5 is produced mainly by activated T cells, and its expression is regulated at the transcriptional level. 1 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 5 5 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 produced produce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 mainly mainly ADV RB _ _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 at at ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 20 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 12017 # text = OBJECTIVE: 1 OBJECTIVE objective NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 12018 # text = This study focuses on the functional analysis of the human IL-5 (hIL-5) promoter and characterization of cis -regulatory elements and transcription factors involved in the suppression of IL-5 transcription in T cells. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 focuses focus VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 functional functional ADJ JJ Degree=Pos _ _ _ _ 7 analysis analysis NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 5 5 NUM CD NumType=Card _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 hIL hil NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 characterization characterization NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 cis cis NOUN NN Number=Sing _ _ _ _ 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 26 elements element NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ _ 29 factors factor NOUN NNS Number=Plur _ _ _ _ 30 involved involved ADJ JJ Degree=Pos _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 suppression suppression NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT , _ _ _ _ SpaceAfter=No 37 5 5 NUM CD NumType=Card _ _ _ _ 38 transcription transcription NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 T t PROPN NNP Number=Sing _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 12019 # text = METHODS: Methods used in this study include DNase I footprint assays, electrophoretic mobility shift assays, and functional analysis by mammalian cell transfection involving deletion analysis and site-directed mutagenesis. 1 METHODS method NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Methods method NOUN NNS Number=Plur _ _ _ _ 4 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 study study NOUN NN Number=Sing _ _ _ _ 8 include include VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 DNase DNase NOUN NN Number=Sing _ _ _ _ 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 footprint footprint VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 assays assays NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 15 mobility mobility NOUN NN Number=Sing _ _ _ _ 16 shift shift NOUN NN Number=Sing _ _ _ _ 17 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 functional functional ADJ JJ Degree=Pos _ _ _ _ 21 analysis analysis NOUN NN Number=Sing _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 mammalian mammalian ADJ JJ Degree=Pos _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 transfection transfection NOUN NN Number=Sing _ _ _ _ 26 involving involve VERB VBG VerbForm=Ger _ _ _ _ 27 deletion deletion NOUN NN Number=Sing _ _ _ _ 28 analysis analysis NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 mutagenesis mutagenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 12020 # text = RESULTS: We identified 5 protein binding regions (BRs) located within the proximal hIL-5 promoter. 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 5 5 NUM CD NumType=Card _ _ _ _ 6 protein protein NOUN NN Number=Sing _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 regions region NOUN NNS Number=Plur _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 BRs BRs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 within within ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 16 hIL hil NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 5 5 NUM CD NumType=Card _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 12021 # text = Functional analysis indicates that the BRs are involved in control of hIL-5 promoter activity. 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 indicates indicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 BRs BR NOUN NNS Number=Plur _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 involved involved ADJ JJ Degree=Pos _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 control control NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 hIL hIL NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 5 5 NUM CD NumType=Card _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 12022 # text = Two of these regions, BR3 and BR4 located at positions -102 to -73, have not previously been described as regulators of IL-5 expression in T cells. 1 Two two NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 regions region NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 BR3 BR3 NUM CD NumType=Card _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 BR4 BR4 NUM CD NumType=Card _ _ _ _ 9 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 at at ADP IN _ _ _ _ _ 11 positions position NOUN NNS Number=Plur _ _ _ _ 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 102 102 NUM CD NumType=Card _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 - - SYM SYM _ _ _ _ SpaceAfter=No 16 73 73 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 previously previously ADV RB _ _ _ _ _ 21 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 22 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 as as ADP IN _ _ _ _ _ 24 regulators regulator NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 5 5 NUM CD NumType=Card _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 12023 # text = We show that the BR3 sequence contains a novel negative regulatory element located at positions -90 to -79 of the hIL-5 promoter, which binds Oct1, octamer-like, and YY1 nuclear factors. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 BR3 BR3 NOUN NN Number=Sing _ _ _ _ 6 sequence sequence NOUN NN Number=Sing _ _ _ _ 7 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 novel novel NOUN NN Number=Sing _ _ _ _ 10 negative negative ADJ JJ Degree=Pos _ _ _ _ 11 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ _ 13 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 at at ADP IN _ _ _ _ _ 15 positions position NOUN NNS Number=Plur _ _ _ _ 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 90 90 NUM CD NumType=Card _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 - - SYM SYM _ _ _ _ SpaceAfter=No 20 79 79 NUM CD NumType=Card _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 hIL hil NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 5 5 NUM CD NumType=Card _ _ _ _ 26 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 which which PRON WDT PronType=Rel _ _ _ _ 29 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 Oct1 Oct1 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 octamer octamer ADV RB _ _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 like like INTJ UH _ _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 YY1 YY1 NUM CD NumType=Card _ _ _ _ 38 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 39 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 12024 # text = Substitution mutations, which abolished binding of these proteins to the BR3 sequence, significantly increased hIL-5 promoter activity in activated T cells. 1 Substitution Substitution NOUN NN Number=Sing _ _ _ _ 2 mutations mutation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 abolished abolish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 binding binding VERB VBG VerbForm=Ger _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 BR3 BR3 NOUN NN Number=Sing _ _ _ _ 13 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 significantly significantly ADV RB _ _ _ _ _ 16 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 hIL hil NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 5 5 NUM CD NumType=Card _ _ _ _ 20 promoter promoter NOUN NN Number=Sing _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 activated activated ADJ JJ Degree=Pos _ _ _ _ 24 T T PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 12025 # text = CONCLUSION: 1 CONCLUSION conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 12026 # text = We suggest that Oct1, YY1, and octamer-like factors binding to the -90/-79 sequence within the proximal IL-5 promoter are involved in suppression of IL-5 transcription in T cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 Oct1 oct1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 YY1 yy1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 octamer octamer ADV RB _ _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 like like SCONJ IN _ _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 - - SYM SYM _ _ _ _ SpaceAfter=No 17 90/-79 90/-79 NUM CD NumType=Card _ _ _ _ 18 sequence sequence NOUN NN Number=Sing _ _ _ _ 19 within within ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 22 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 5 5 NUM CD NumType=Card _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ _ 26 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 involved involved ADJ JJ Degree=Pos _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 suppression suppression NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 5 5 NUM CD NumType=Card _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 T t PROPN NNP Number=Sing _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12027 # text = Document 0030012808 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012808 0030012808 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12028 # text = The role of BSAP (Pax-5) in B-cell development. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 BSAP BSAP PROPN NNP Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 Pax Pax NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 B B ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12029 # text = The hierarchy of transcriptional control in B-cell development has recently been analyzed by targeted gene inactivation in the mouse. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 hierarchy hierarchy NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 control control NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 B B ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 development development NOUN NN Number=Sing _ _ _ _ 11 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 recently recently ADV RB _ _ _ _ _ 13 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 14 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 targeted target VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 inactivation inactivation NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 mouse mouse NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 12030 # text = In this manner, the paired box containing gene Pax-5, encoding the B cell specific transcription factor BSAP, has been shown to play a key role in early B lymphopoiesis. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 paired paire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 box box NOUN NN Number=Sing _ _ _ _ 8 containing contain VERB VBG VerbForm=Ger _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 Pax Pax NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 B b PROPN NNP Number=Sing _ _ _ _ 17 cell cell PROPN NNP Number=Sing _ _ _ _ 18 specific specific ADJ JJ Degree=Pos _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 BSAP BSAP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 25 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 play play VERB VB VerbForm=Inf _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 key key ADJ JJ Degree=Pos _ _ _ _ 30 role role NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 early early ADJ JJ Degree=Pos _ _ _ _ 33 B b ADJ JJ Degree=Pos _ _ _ _ 34 lymphopoiesis lymphopoiesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 12031 # text = Other experimental strategies have implicated BSAP in the control of cell proliferation, isotype switching and transcription of the immunoglobulin heavy-chain gene at late stages of B-cell differentiation. 1 Other other ADJ JJ Degree=Pos _ _ _ _ 2 experimental experimental ADJ JJ Degree=Pos _ _ _ _ 3 strategies strategy NOUN NNS Number=Plur _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 implicated implicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 BSAP Bsap PROPN NNP Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 control control NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 isotype isotype NOUN NN Number=Sing _ _ _ _ 15 switching switching NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 21 heavy heavy ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 chain chain NOUN NN Number=Sing _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 at at ADP IN _ _ _ _ _ 26 late late ADJ JJ Degree=Pos _ _ _ _ 27 stages stage NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12032 # text = Document 0030012809 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012809 0030012809 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12033 # text = Elf-1 and Stat5 bind to a critical element in a new enhancer of the human interleukin-2 receptor alpha gene [published erratum appears in Mol Cell Biol 1997 Apr;17(4):2351] 1 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 Stat5 Stat5 NUM CD NumType=Card _ _ _ _ 6 bind bind NOUN NN Number=Sing _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 critical critical ADJ JJ Degree=Pos _ _ _ _ 10 element element NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 new new ADJ JJ Degree=Pos _ _ _ _ 14 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ _ 22 alpha alpha NOUN NN Number=Sing _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 published publish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 erratum erratum NOUN NN Number=Sing _ _ _ _ 27 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 Mol Mol PROPN NNP Number=Sing _ _ _ _ 30 Cell cell PROPN NNP Number=Sing _ _ _ _ 31 Biol Biol PROPN NNP Number=Sing _ _ _ _ 32 1997 1997 NUM CD NumType=Card _ _ _ _ 33 Apr;17 Apr;17 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 :2351 :2351 NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 12034 # text = The interleukin 2 receptor alpha-chain (IL-2R alpha) gene is a key regulator of lymphocyte proliferation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 3 2 2 NUM CD NumType=Card _ _ _ _ 4 receptor receptor NOUN NN Number=Sing _ _ _ _ 5 alpha-chain alpha-chain NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 2R 2r NOUN NN Number=Sing _ _ _ _ 10 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 key key ADJ JJ Degree=Pos _ _ _ _ 16 regulator regulator NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 19 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 12035 # text = IL-2R alpha is rapidly and potently induced in T cells in response to mitogenic stimuli. 1 IL Il ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2R 2r NOUN NN Number=Sing _ _ _ _ 4 alpha alpha NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 rapidly rapidly ADV RB _ _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 potently potently ADV RB _ _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 T t PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 response response NOUN NN Number=Sing _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 mitogenic mitogenic ADJ JJ Degree=Pos _ _ _ _ 17 stimuli stimuli NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 12036 # text = Interleukin 2 (IL-2) stimulates IL-2R alpha transcription, thereby amplifying expression of its own high-affinity receptor. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ _ 2 2 2 NUM CD NumType=Card _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 X LS _ _ _ _ SpaceAfter=No 12 R r X GW _ _ _ _ _ 13 alpha alpha X FW Foreign=Yes _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 thereby thereby ADV RB _ _ _ _ _ 17 amplifying amplify VERB VBG VerbForm=Ger _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 own own ADJ JJ Degree=Pos _ _ _ _ 22 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 affinity affinity NOUN NN Number=Sing _ _ _ _ 25 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 12037 # text = IL-2R alpha transcription is at least in part controlled by two positive regulatory regions, PRRI and PRRII. 1 IL Il INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 2R 2r VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 alpha alpha NOUN NN Number=Sing _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 at at ADV RB _ _ _ _ _ 8 least least ADV RBS Degree=Sup _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 part part NOUN NN Number=Sing _ _ _ _ 11 controlled control VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 two two NUM CD NumType=Card _ _ _ _ 14 positive positive ADJ JJ Degree=Pos _ _ _ _ 15 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 16 regions region NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 PRRI PRRI PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 PRRII PRRII PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 12038 # text = PRRI is an inducible proximal enhancer, located between nucleotides -276 and -244, which contains NF-kappaB and SRE/CArG motifs. 1 PRRI PRRI PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 5 proximal proximal NOUN NN Number=Sing _ _ _ _ 6 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 between between ADP IN _ _ _ _ _ 10 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 276 276 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 - - SYM SYM _ _ _ _ SpaceAfter=No 15 244 244 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 SRE SRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 / / PUNCT , _ _ _ _ SpaceAfter=No 25 CArG CArG PROPN NNP Number=Sing _ _ _ _ 26 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 12039 # text = PRRII is a T-cell-specific enhancer, located between nucleotides -137 and -64, which binds the T-cell-specific Ets protein Elf-1 and HMG-I(Y) proteins. 1 PRRII pRRIi PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 between between ADP IN _ _ _ _ _ 12 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 137 137 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 - - SYM SYM _ _ _ _ SpaceAfter=No 17 64 64 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 which which PRON WDT PronType=Rel _ _ _ _ 20 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 specific specific ADJ JJ Degree=Pos _ _ _ _ 26 Ets et NOUN NNS Number=Plur _ _ _ _ 27 protein protein ADV WRB PronType=Rel _ _ _ _ 28 Elf Elf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 HMG Hmg NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 Y y ADV WRB PronType=Int _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 12040 # text = However, none of these proximal regions account for the induction of IL-2R alpha transcription by IL-2. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 none none NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 7 regions region NOUN NNS Number=Plur _ _ _ _ 8 account account NOUN NN Number=Sing _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 induction induction NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2R 2R PROPN NNP Number=Sing _ _ _ _ 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 12041 # text = To find new regulatory regions of the IL-2R alpha gene, 8.5 kb of the 5' end noncoding sequence of the IL-2R alpha gene have been sequenced. 1 To to PART TO _ _ _ _ _ 2 find find VERB VB VerbForm=Inf _ _ _ _ 3 new new ADJ JJ Degree=Pos _ _ _ _ 4 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 5 regions region NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2R 2r PROPN NNP Number=Sing _ _ _ _ 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 8.5 8.5 NUM CD NumType=Card _ _ _ _ 15 kb kb NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ' ' PUNCT `` _ _ _ _ _ 20 end end NOUN NN Number=Sing _ _ _ _ 21 noncoding noncoding NOUN NN Number=Sing _ _ _ _ 22 sequence sequence NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2R 2r PROPN NNP Number=Sing _ _ _ _ 28 alpha alpha NOUN NN Number=Sing _ _ _ _ 29 gene gene NOUN NN Number=Sing _ _ _ _ 30 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 32 sequenced sequence VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 12042 # text = We identified an 86-nucleotide fragment that is 90% identical to the recently characterized murine IL-2-responsive element (mIL-2rE). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 86 86 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 nucleotide nucleotide NOUN NN Number=Sing _ _ _ _ 7 fragment fragment NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 90 90 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 % % SYM NN Number=Sing _ _ _ _ 12 identical identical ADJ JJ Degree=Pos _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 recently recently ADV RB _ _ _ _ _ 16 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 murine murine NOUN NN Number=Sing _ _ _ _ 18 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 23 element element NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 mIL mil NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2rE 2re NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 12043 # text = This putative human IL-2rE, designated PRRIII, confers IL-2 responsiveness on a heterologous promoter. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 putative putative ADJ JJ Degree=Pos _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2rE 2re NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 PRRIII pRRIIi NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 confers confer NOUN NNS Number=Plur _ _ _ _ 12 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 12044 # text = PRRIII contains a Stat protein binding site that overlaps with an EBS motif (GASd/EBSd). 1 PRRIII Prriii PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 Stat Stat NOUN NN Number=Sing _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 site site NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 overlaps overlaps VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 EBS EBS PROPN NNP Number=Sing _ _ _ _ 13 motif motif NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 GASd/EBSd GASd/EBS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 12045 # text = These are essential for IL-2 inducibility of PRRIII/CAT reporter constructs. 1 These these PRON DT Number=Plur|PronType=Dem _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 essential essential ADJ JJ Degree=Pos _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 inducibility inducibility NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 PRRIII PRRIII PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 CAT cat ADJ JJ Degree=Pos _ _ _ _ 13 reporter reporter NOUN NN Number=Sing _ _ _ _ 14 constructs construct NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 12046 # text = IL-2 induced the binding of Stat5a and b proteins to the human GASd element. 1 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 binding binding NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Stat5 Stat5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 b b NOUN NN Number=Sing _ _ _ _ 12 proteins protein NOUN NNS Number=Plur _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 GASd Gasd PROPN NNP Number=Sing _ _ _ _ 17 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 12047 # text = To confirm the physiological relevance of these findings, we carried out in vivo footprinting experiments which showed that stimulation of IL-2R alpha expression correlated with occupancy of the GASd element. 1 To to PART TO _ _ _ _ _ 2 confirm confirm VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 physiological physiological ADJ JJ Degree=Pos _ _ _ _ 5 relevance relevance NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 findings finding NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 11 carried carry VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 out out ADP RP _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 vivo vivo NOUN NN Number=Sing _ _ _ _ 15 footprinting footprint VERB VBG VerbForm=Ger _ _ _ _ 16 experiments experiment NOUN NNS Number=Plur _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 20 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2R 2R PROPN NNP Number=Sing _ _ _ _ 25 alpha alpha NOUN NN Number=Sing _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 occupancy occupancy NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 GASd GAS PROPN NNP Number=Sing _ _ _ _ 33 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 12048 # text = Our data demonstrate a major role of the GASd/EBSd element in IL-2R alpha regulation and suggest that the T-cell-specific Elf-1 factor can serve as a transcriptional repressor. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 major major ADJ JJ Degree=Pos _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 GASd/EBSd GASd/EBSd PROPN NNP Number=Sing _ _ _ _ 10 element element NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2R 2R PROPN NNP Number=Sing _ _ _ _ 15 alpha alpha NOUN NN Number=Sing _ _ _ _ 16 regulation regulation NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 T-cell T-cell ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 specific specific ADJ JJ Degree=Pos _ _ _ _ 24 Elf Elf NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ _ 28 can can AUX MD VerbForm=Fin _ _ _ _ 29 serve serve VERB VB VerbForm=Inf _ _ _ _ 30 as as ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 33 repressor repressor NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12049 # text = Document 0030012812 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012812 0030012812 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12050 # text = Identification of an inducible regulator of c-myb expression during T-cell activation. 1 Identification identification NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 5 regulator regulator NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 c- c- SYM NFP _ _ _ _ SpaceAfter=No 8 myb myb NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 during during ADP IN _ _ _ _ _ 11 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12051 # text = Resting T cells express very low levels of c-Myb protein. 1 Resting rest VERB VBG VerbForm=Ger _ _ _ _ 2 T t PROPN NNP Number=Sing _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 express express NOUN NNS Number=Plur _ _ _ _ 5 very very ADV RB _ _ _ _ _ 6 low low ADJ JJ Degree=Pos _ _ _ _ 7 levels level NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 Myb Myb NOUN NN Number=Sing _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 12052 # text = During T-cell activation, c-myb expression is induced and much of the increase in expression occurs at the transcriptional level. 1 During during ADP IN _ _ _ _ _ 2 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 c- c- SYM NFP _ _ _ _ SpaceAfter=No 7 myb myb NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 induced induced ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 much much ADJ JJ Degree=Pos _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 increase increase NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 occurs occur NOUN NNS Number=Plur _ _ _ _ 19 at at ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 22 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 12053 # text = We identified a region of the c-myb 5' flanking sequence that increased c-myb expression during T-cell activation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 region region NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 c- c- SYM NFP _ _ _ _ SpaceAfter=No 8 myb myb NOUN NN Number=Sing _ _ _ _ 9 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ' ' PUNCT `` _ _ _ _ _ 11 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 12 sequence sequence NOUN NN Number=Sing _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 c- c- SYM NFP _ _ _ _ SpaceAfter=No 16 myb myb NOUN NN Number=Sing _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 during during ADP IN _ _ _ _ _ 19 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 12054 # text = In vivo footprinting by ligation-mediated PCR was performed to correlate in vivo protein binding with functional activity. 1 In in ADP IN _ _ _ _ _ 2 vivo vivo NOUN NN Number=Sing _ _ _ _ 3 footprinting footprinting VERB VBG VerbForm=Ger _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 ligation ligation NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 PCR Pcr PROPN NNP Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 performed perform VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 correlate correlate VERB VB VerbForm=Inf _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 vivo vivo NOUN NN Number=Sing _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 binding bind VERB VBG VerbForm=Ger _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 functional functional ADJ JJ Degree=Pos _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 12055 # text = A protein footprint was visible over this region of the c-myb 5' flanking sequence in activated T cells but not in unactivated T cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 footprint footprint NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 visible visible ADJ JJ Degree=Pos _ _ _ _ 6 over over ADP IN _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 region region NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 c- c- SYM NFP _ _ _ _ SpaceAfter=No 12 myb myb NOUN NN Number=Sing _ _ _ _ 13 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ' ' PUNCT `` _ _ _ _ _ 15 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 16 sequence sequence NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 but but CCONJ CC _ _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 unactivated unactivated ADJ JJ Degree=Pos _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 12056 # text = An electrophoretic mobility shift assay (EMSA) with nuclear extract from activated T cells and an oligonucleotide of this binding site demonstrated a new protein-DNA complex, referred to as CMAT for c-myb in activated T cells; this complex was not present in unactivated T cells. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 3 mobility mobility NOUN NN Number=Sing _ _ _ _ 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assay assay NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 EMSA EMSA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 extract extract NOUN NN Number=Sing _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 oligonucleotide oligonucleotide NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 21 binding binding ADJ JJ Degree=Pos _ _ _ _ 22 site site NOUN NN Number=Sing _ _ _ _ 23 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 new new ADJ JJ Degree=Pos _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 DNA dna NOUN NN Number=Sing _ _ _ _ 29 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 referred refer VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 as as ADP IN _ _ _ _ _ 34 CMAT CMAT PROPN NNP Number=Sing _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 c- c- SYM NFP _ _ _ _ SpaceAfter=No 37 myb myb NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 activated activated ADJ JJ Degree=Pos _ _ _ _ 40 T T PROPN NNP Number=Sing _ _ _ _ 41 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 ; ; PUNCT , _ _ _ _ _ 43 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 44 complex complex NOUN NN Number=Sing _ _ _ _ 45 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 46 not not PART RB _ _ _ _ _ 47 present present ADJ JJ Degree=Pos _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 unactivated unactivated ADJ JJ Degree=Pos _ _ _ _ 50 T T PROPN NNP Number=Sing _ _ _ _ 51 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 12057 # text = Because the binding site showed some sequence similarity with the nuclear factor of activated T cells (NFAT) binding site, we compared the kinetics of induction of the two binding complexes and the molecular masses of the two proteins. 1 Because because SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 binding binding VERB VBG VerbForm=Ger _ _ _ _ 4 site site NOUN NN Number=Sing _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 some some DET DT _ _ _ _ _ 7 sequence sequence NOUN NN Number=Sing _ _ _ _ 8 similarity similarity NOUN NN Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 binding bind VERB VBG VerbForm=Ger _ _ _ _ 21 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 24 compared compare VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 induction induction NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 two two NUM CD NumType=Card _ _ _ _ 32 binding binding VERB VBG VerbForm=Ger _ _ _ _ 33 complexes complex NOUN NNS Number=Plur _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 37 masses mass NOUN NNS Number=Plur _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 two two NUM CD NumType=Card _ _ _ _ 41 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 12058 # text = Studies of the kinetics of induction showed that the NFAT EMSA binding complex appeared earlier than the CMAT complex. 1 Studies study NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 kinetics kinetic NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 induction induction NOUN NN Number=Sing _ _ _ _ 7 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 11 EMSA EMSA PROPN NNP Number=Sing _ _ _ _ 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 complex complex NUM CD NumType=Card _ _ _ _ 14 appeared appear VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 earlier earlier ADJ JJR Degree=Cmp _ _ _ _ 16 than than ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 CMAT Cmat NOUN NN Number=Sing _ _ _ _ 19 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 12059 # text = The NFAT protein migrated more slowly in a sodium dodecyl sulfate-polyacrylamide gel than the CMAT protein did. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 migrated migrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 more more ADV RBR _ _ _ _ _ 6 slowly slowly ADV RB _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 sodium sodium NOUN NN Number=Sing _ _ _ _ 10 dodecyl dodecyl NOUN NN Number=Sing _ _ _ _ 11 sulfate- sulfate- PUNCT : _ _ _ _ SpaceAfter=No 12 polyacrylamide polyacrylamide NOUN NN Number=Sing _ _ _ _ 13 gel gel NOUN NN Number=Sing _ _ _ _ 14 than than ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 CMAT CMAT PROPN NNP Number=Sing _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 did do VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 12060 # text = In addition, an antibody against NFAT did not cross-react with the CMAT protein. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 antibody antibody NOUN NN Number=Sing _ _ _ _ 6 against against ADP IN _ _ _ _ _ 7 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 8 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 cross-react cross-react VERB VB VerbForm=Inf _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 CMAT Cmat NOUN NN Number=Sing _ _ _ _ 14 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 12061 # text = The appearance of the CMAT binding complex was inhibited by both cyclosporin A and rapamycin. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 appearance appearance NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 CMAT CMAT NOUN NN Number=Sing _ _ _ _ 6 binding binding VERB VBG VerbForm=Ger _ _ _ _ 7 complex complex NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 both both DET DT _ _ _ _ _ 12 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 13 A a NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 rapamycin rapamycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 12062 # text = The CMAT protein appears to be a novel inducible protein involved in the regulation of c-myb expression during T-cell activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 CMAT Cmat NOUN NN Number=Sing _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 novel novel ADJ JJ Degree=Pos _ _ _ _ 9 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 regulation regulation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 c- c- SYM NFP _ _ _ _ SpaceAfter=No 17 myb myb NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 during during ADP IN _ _ _ _ _ 20 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12063 # text = Document 0030012813 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012813 0030012813 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12064 # text = Unicellular-unilineage erythropoietic cultures: molecular analysis of regulatory gene expression at sibling cell level. 1 Unicellular Unicelular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 unilineage unilineage ADJ JJ Degree=Pos _ _ _ _ 4 erythropoietic erythropoietic ADJ JJ Degree=Pos _ _ _ _ 5 cultures culture NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 : : PUNCT : _ _ _ _ _ 7 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 8 analysis analysis NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 at at SCONJ IN _ _ _ _ _ 14 sibling sibl VERB VBG VerbForm=Ger _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12065 # text = In vitro studies on hematopoietic control mechanisms have been hampered by the heterogeneity of the analyzed cell populations, ie, lack of lineage specificity and developmental stage homogeneity of progenitor/precursor cells growing in culture. 1 In in ADP IN _ _ _ _ _ 2 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 6 control control NOUN NN Number=Sing _ _ _ _ 7 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 8 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 10 hampered hamper VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 heterogeneity heterogeneity NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 populations population NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 ie ie X FW _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 lack lack NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 lineage lineage NOUN NN Number=Sing _ _ _ _ 25 specificity specificity NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 28 stage stage NOUN NN Number=Sing _ _ _ _ 29 homogeneity homogeneity NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 progenitor progenitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 / / PUNCT , _ _ _ _ SpaceAfter=No 33 precursor precursor NOUN NN Number=Sing _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ _ 35 growing grow VERB VBG VerbForm=Ger _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 culture culture NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 12066 # text = We developed unicellular culture systems for unilineage differentiation of purified hematopoietic progenitor cells followed by daughter cell analysis at cellular and molecular level. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 developed develop VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 unicellular unicellular ADJ JJ Degree=Pos _ _ _ _ 4 culture culture NOUN NN Number=Sing _ _ _ _ 5 systems system NOUN NNS Number=Plur _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 unilineage unilineage NOUN NN Number=Sing _ _ _ _ 8 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 12 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 daughter daughter NOUN NN Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 analysis analysis NOUN NN Number=Sing _ _ _ _ 19 at at ADP IN _ _ _ _ _ 20 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 23 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 12067 # text = In the culture system reported here, (1) the growth factor (GF) stimulus induces cord blood (CB) progenitor cells to proliferate and differentiate/mature exclusively along the erythroid lineage; (2) this erythropoietic wave is characterized by less than 4% apoptotic cells; (3) asymmetric divisions are virtually absent, ie, nonresponsive hematopoietic progenitors with no erythropoietic potential are forced into apoptosis; (4) the system is cell division controlled (cdc), ie, the number of divisions performed by each cell is monitored. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 culture culture NOUN NN Number=Sing _ _ _ _ 4 system system NOUN NN Number=Sing _ _ _ _ 5 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 1 1 X LS _ _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 growth growth NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 GF gf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 stimulus stimulus ADJ JJ Degree=Pos _ _ _ _ 18 induces induce NOUN NNS Number=Plur _ _ _ _ 19 cord cord NOUN NN Number=Sing _ _ _ _ 20 blood blood NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 CB CB NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 proliferate proliferate VERB VB VerbForm=Inf _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 differentiate differentiate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 30 / / PUNCT , _ _ _ _ SpaceAfter=No 31 mature mature ADJ JJ Degree=Pos _ _ _ _ 32 exclusively exclusively ADV RB _ _ _ _ _ 33 along along ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 36 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 ; ; PUNCT , _ _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 2 2 X LS _ _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ _ 41 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 42 erythropoietic erythropoietic ADJ JJ Degree=Pos _ _ _ _ 43 wave wave NOUN NN Number=Sing _ _ _ _ 44 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 45 characterized characterize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 46 by by ADP IN _ _ _ _ _ 47 less less ADJ JJR Degree=Cmp _ _ _ _ 48 than than ADP IN _ _ _ _ _ 49 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 % % SYM NN Number=Sing _ _ _ _ 51 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 52 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 ; ; PUNCT , _ _ _ _ _ 54 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 55 3 3 X LS _ _ _ _ SpaceAfter=No 56 ) ) PUNCT -RRB- _ _ _ _ _ 57 asymmetric asymmetric ADJ JJ Degree=Pos _ _ _ _ 58 divisions division NOUN NNS Number=Plur _ _ _ _ 59 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 60 virtually virtually ADV RB _ _ _ _ _ 61 absent absend VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 62 , , PUNCT , _ _ _ _ _ 63 ie ie X FW _ _ _ _ SpaceAfter=No 64 , , PUNCT , _ _ _ _ _ 65 nonresponsive nonresponsive ADJ JJ Degree=Pos _ _ _ _ 66 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 67 progenitors progenitor NOUN NNS Number=Plur _ _ _ _ 68 with with ADP IN _ _ _ _ _ 69 no no DET DT _ _ _ _ _ 70 erythropoietic erythropoietic ADJ JJ Degree=Pos _ _ _ _ 71 potential potential NOUN NN Number=Sing _ _ _ _ 72 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 73 forced force VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 74 into into ADP IN _ _ _ _ _ 75 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 76 ; ; PUNCT , _ _ _ _ _ 77 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 78 4 4 X LS _ _ _ _ SpaceAfter=No 79 ) ) PUNCT -RRB- _ _ _ _ _ 80 the the DET DT Definite=Def|PronType=Art _ _ _ _ 81 system system NOUN NN Number=Sing _ _ _ _ 82 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 83 cell cell NOUN NN Number=Sing _ _ _ _ 84 division division NOUN NN Number=Sing _ _ _ _ 85 controlled control VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 86 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 87 cdc cdc NOUN NN Number=Sing _ _ _ SpaceAfter=No 88 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 89 , , PUNCT , _ _ _ _ _ 90 ie ie X FW _ _ _ _ SpaceAfter=No 91 , , PUNCT , _ _ _ _ _ 92 the the DET DT Definite=Def|PronType=Art _ _ _ _ 93 number number NOUN NN Number=Sing _ _ _ _ 94 of of ADP IN _ _ _ _ _ 95 divisions division NOUN NNS Number=Plur _ _ _ _ 96 performed perform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 97 by by ADP IN _ _ _ _ _ 98 each each DET DT _ _ _ _ _ 99 cell cell NOUN NN Number=Sing _ _ _ _ 100 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 101 monitored monitor VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 102 . . PUNCT . _ _ _ _ _ # sent_id = 12068 # text = Single-cell reverse transcriptase-polymerase chain reaction (RT-PCR) analysis was applied to this culture system to investigate gene expression of diverse receptors, markers of differentiation, and transcription factors (EKLF, GATA-1, GATA-2, p45 NF-E2, PU.1, and SCL/Tal1) at discrete stages of erythropoietic development. 1 Single single ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 reverse reverse NOUN NN Number=Sing _ _ _ _ 5 transcriptase transcriptase NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 8 chain chain NOUN NN Number=Sing _ _ _ _ 9 reaction reaction NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 RT-PCR RT-PCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 analysis analysis NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 applied apply VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 18 culture culture NOUN NN Number=Sing _ _ _ _ 19 system system NOUN NN Number=Sing _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 diverse diverse ADJ JJ Degree=Pos _ _ _ _ 26 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 markers marker NOUN NNS Number=Plur _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 factors factor NOUN NNS Number=Plur _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 EKLF EKLF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 p45 p45 NUM CD NumType=Card _ _ _ _ 47 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 E2 e2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 , , PUNCT , _ _ _ _ _ 51 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 and and CCONJ CC _ _ _ _ _ 54 SCL SCL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 55 / / PUNCT , _ _ _ _ SpaceAfter=No 56 Tal1 Tal1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 57 ) ) PUNCT -RRB- _ _ _ _ _ 58 at at ADP IN _ _ _ _ _ 59 discrete discrete NOUN NN Number=Sing _ _ _ _ 60 stages stage NOUN NNS Number=Plur _ _ _ _ 61 of of ADP IN _ _ _ _ _ 62 erythropoietic erythropoietic ADJ JJ Degree=Pos _ _ _ _ 63 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 64 . . PUNCT . _ _ _ _ _ # sent_id = 12069 # text = Freshly isolated CD34(+) cells expressed CD34, c-kit, PU.1, and GATA-2 but did not express CD36, erythropoietin receptor (EpoR), SCL/Tal1, EKLF, NF-E2, GATA-1, or glyocophorin A (GPA). 1 Freshly freshly ADV RB _ _ _ _ _ 2 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 CD34 Cd34 NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 +) +) PUNCT -RRB- _ _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 CD34 Cd34 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 c- c- SYM NFP _ _ _ _ SpaceAfter=No 11 kit kit NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 PU.1 Pu.1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 but but CCONJ CC _ _ _ _ _ 20 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 express express VERB VB VerbForm=Inf _ _ _ _ 23 CD36 Cd36 NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 erythropoietin erythropoietin NOUN NN Number=Sing _ _ _ _ 26 receptor receptor NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 EpoR EpoR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 SCL SCL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 /Tal1 /Tal1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 EKLF EKLF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 E2 e2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 GATA GATA NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 or or CCONJ CC _ _ _ _ _ 45 glyocophorin glyocophorin NOUN NN Number=Sing _ _ _ _ 46 A A PROPN NNP Number=Sing _ _ _ _ 47 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 48 GPA gpa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 12070 # text = In early to intermediate stages of erythroid differentiation we monitored the induction of CD36, Tal1, EKLF, NF-E2, and GATA-1 that preceeded expression of EpoR. 1 In in ADP IN _ _ _ _ _ 2 early early ADV RB Degree=Pos _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 intermediate intermediate ADJ JJ Degree=Pos _ _ _ _ 5 stages stage NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 8 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 9 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 10 monitored monitor VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 CD36 Cd36 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 Tal1 Tal1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 EKLF EKLF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 E2 e2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 that that PRON WDT PronType=Rel _ _ _ _ 29 preceeded proceeed VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 EpoR EpoR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 12071 # text = In late stages of erythroid maturation, GPA was upregulated, whereas CD34, c-kit, PU.1, and GATA-2 were barely or not detected. 1 In in ADP IN _ _ _ _ _ 2 late late ADJ JJ Degree=Pos _ _ _ _ 3 stages stage NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 6 maturation maturation NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 GPA gpa PROPN NNP Number=Sing _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 upregulated upregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 whereas whereas SCONJ IN _ _ _ _ _ 13 CD34 CD34 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 c- c- SYM NFP _ _ _ _ SpaceAfter=No 16 kit kit NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 PU.1 Pu.1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ _ 24 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 barely barely ADV RB _ _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 not not PART RB _ _ _ _ _ 28 detected detect VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 12072 # text = In addition, competitive single-cell RT-PCR was used to assay CD34 mRNA transcripts in sibling CD34(+) CD38(-) cells differentiating in unilineage erythroid cultures: this analysis allowed us to semiquantitate the gradual downmodulation of CD34 mRNA from progenitor cells through their differentiating erythroid progeny. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 competitive competitive ADJ JJ Degree=Pos _ _ _ _ 5 single single ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 RT Rt NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 PCR Pcr NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 assay assay VERB VB VerbForm=Inf _ _ _ _ 15 CD CD NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 34 34 NUM CD NumType=Card _ _ _ _ 17 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 18 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 19 in in SCONJ IN _ _ _ _ _ 20 sibling sibl VERB VBG VerbForm=Ger _ _ _ _ 21 CD34 CD34 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 +) +) SYM NFP _ _ _ _ _ 24 CD38 CD38 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 (-) (-) PUNCT . _ _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 differentiating differentiat VERB VBG VerbForm=Ger _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 unilineage unilineage ADJ JJ Degree=Pos _ _ _ _ 30 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 31 cultures culture NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 : : PUNCT : _ _ _ _ _ 33 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 34 analysis analysis NOUN NN Number=Sing _ _ _ _ 35 allowed allow VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 us we PRON PRP Case=Acc|Number=Plur|Person=1|PronType=Prs _ _ _ _ 37 to to PART TO _ _ _ _ _ 38 semiquantitate semiquantitate VERB VB VerbForm=Inf _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 gradual gradual ADJ JJ Degree=Pos _ _ _ _ 41 downmodulation downmodulation NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 CD cd PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 34 34 NUM CD NumType=Card _ _ _ _ 45 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 46 from from ADP IN _ _ _ _ _ 47 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 48 cells cell NOUN NNS Number=Plur _ _ _ _ 49 through through ADP IN _ _ _ _ _ 50 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 51 differentiating differentiat NOUN NN Number=Sing _ _ _ _ 52 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 53 progeny progeny NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 12073 # text = It is concluded that this novel culture system, coupled with single-cell RT-PCR analysis, may eliminate the ambiguities intrinsic to molecular studies on heterogeneous populations of hematopoietic progenitors/precursors growing in culture, particularly in the initial stages of development. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 concluded conclude VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 novel novel NOUN NN Number=Sing _ _ _ _ 7 culture culture NOUN NN Number=Sing _ _ _ _ 8 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 coupled couple VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 single single ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 RT Rt NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 PCR Pcr NOUN NN Number=Sing _ _ _ _ 18 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 may may AUX MD VerbForm=Fin _ _ _ _ 21 eliminate eliminate VERB VB VerbForm=Inf _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 ambiguities ambiguity NOUN NNS Number=Plur _ _ _ _ 24 intrinsic intrinsic ADJ JJ Degree=Pos _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 27 studies study NOUN NNS Number=Plur _ _ _ _ 28 on on ADP IN _ _ _ _ _ 29 heterogeneous heterogeneous ADJ JJ Degree=Pos _ _ _ _ 30 populations population NOUN NNS Number=Plur _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 33 progenitors progenitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 / / PUNCT , _ _ _ _ SpaceAfter=No 35 precursors precursor NOUN NNS Number=Plur _ _ _ _ 36 growing grow VERB VBG VerbForm=Ger _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 culture culture NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 particularly particularly ADV RB _ _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 initial initial ADJ JJ Degree=Pos _ _ _ _ 44 stages stage NOUN NNS Number=Plur _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12074 # text = Document 0030012817 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012817 0030012817 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12075 # text = Induction of bcl-2 expression by phosphorylated CREB proteins during B-cell activation and rescue from apoptosis. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 CREB Creb NOUN NN Number=Sing _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ _ 11 during during ADP IN _ _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 rescue rescue NOUN NN Number=Sing _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12076 # text = Engagement of surface immunoglobulin on mature B cells leads to rescue from apoptosis and to proliferation. 1 Engagement engagement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 surface surface NOUN NN Number=Sing _ _ _ _ 4 immunoglobulin immunoglobulin NOUN NN Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 mature mature ADJ JJ Degree=Pos _ _ _ _ 7 B b ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 rescue rescue VERB VB VerbForm=Inf _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 12077 # text = Levels of bcl-2 mRNA and protein increase with cross-linking of surface immunoglobulin. 1 Levels level NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 increase increase NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 -linking -linking NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 surface surface NOUN NN Number=Sing _ _ _ _ 15 immunoglobulin immunoglobulin NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 12078 # text = We have located the major positive regulatory region for control of bcl-2 expression in B cells in the 5'-flanking region. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 major major ADJ JJ Degree=Pos _ _ _ _ 6 positive positive ADJ JJ Degree=Pos _ _ _ _ 7 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 8 region region NOUN NN Number=Sing _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 control control NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 B b ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ' ' NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 flanking flanking NOUN NN Number=Sing _ _ _ _ 25 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 12079 # text = The positive region can be divided into an upstream and a downstream regulatory region. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 positive positive ADJ JJ Degree=Pos _ _ _ _ 3 region region NOUN NN Number=Sing _ _ _ _ 4 can can AUX MD VerbForm=Fin _ _ _ _ 5 be be AUX VB VerbForm=Inf _ _ _ _ 6 divided divide VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 into into ADP IN _ _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 upstream upstream NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 13 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 14 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 12080 # text = The downstream regulatory region contains a cyclic AMP-responsive element (CRE). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 3 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 4 region region NOUN NN Number=Sing _ _ _ _ 5 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 cyclic cyclic ADJ JJ Degree=Pos _ _ _ _ 8 AMP Amp NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 11 element element NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 CRE CRE NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 12081 # text = We show by antibody supershift experiments and UV cross-linking followed by denaturing polyacrylamide gel electrophoresis that both CREB and ATF family members bind to this region in vitro. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 antibody antibody PRON NN Number=Sing _ _ _ _ 5 supershift supershift ADJ JJ Degree=Pos _ _ _ _ 6 experiments experiment NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 UV UV NOUN NN Number=Sing _ _ _ _ 9 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 -linking -link VERB VBG VerbForm=Ger _ _ _ _ 11 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by SCONJ IN _ _ _ _ _ 13 denaturing denatur VERB VBG VerbForm=Ger _ _ _ _ 14 polyacrylamide polyacrylamide NOUN NN Number=Sing _ _ _ _ 15 gel gel NOUN NN Number=Sing _ _ _ _ 16 electrophoresis electrophoresis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 that that SCONJ IN _ _ _ _ _ 18 both both DET DT _ _ _ _ _ 19 CREB CREB NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 ATF ATF ADJ JJ Degree=Pos _ _ _ _ 22 family family NOUN NN Number=Sing _ _ _ _ 23 members member NOUN NNS Number=Plur _ _ _ _ 24 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 27 region region NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 12082 # text = Mutations of the CRE site that result in loss of CREB binding also lead to loss of functional activity of the bcl-2 promoter in transient-transfection assays. 1 Mutations Mutation NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 CRE CRE ADJ JJ Degree=Pos _ _ _ _ 5 site site NOUN NN Number=Sing _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 result result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 loss loss NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 CREB CREB PROPN NNP Number=Sing _ _ _ _ 12 binding bind VERB VBG VerbForm=Ger _ _ _ _ 13 also also ADV RB _ _ _ _ _ 14 lead lead ADJ JJ Degree=Pos _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 loss loss NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 functional functional ADJ JJ Degree=Pos _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 transient transient ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 transfection transfection NOUN NN Number=Sing _ _ _ _ 30 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 12083 # text = The presence of an active CRE site in the bcl-2 promoter implies that the regulation of bcl-2 expression is linked to a signal transduction pathway in B cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 presence presence NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 active active ADJ JJ Degree=Pos _ _ _ _ 6 CRE Cre NOUN NN Number=Sing _ _ _ _ 7 site site NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 implies imply VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 regulation regulation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 linked link VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 signal signal NOUN NN Number=Sing _ _ _ _ 28 transduction transduction NOUN NN Number=Sing _ _ _ _ 29 pathway pathway NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 B b ADJ JJ Degree=Pos _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 12084 # text = Treatment of the mature B-cell line BAL-17 with either anti-immunoglobulin M or phorbol 12-myristate 13-acetate leads to an increase in bcl-2 expression that is mediated by the CRE site. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mature mature ADJ JJ Degree=Pos _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 line line NOUN NN Number=Sing _ _ _ _ 9 BAL Bal NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 17 17 NUM CD NumType=Card _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 either either DET DT _ _ _ _ _ 14 anti-immunoglobulin anti-immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 15 M m NOUN NN Number=Sing _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 18 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - PUNCT : _ _ _ _ SpaceAfter=No 20 myristate myristate NOUN NN Number=Sing _ _ _ _ 21 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT : _ _ _ _ SpaceAfter=No 23 acetate acetate NOUN NN Number=Sing _ _ _ _ 24 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 increase increase NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ _ 33 that that PRON WDT PronType=Rel _ _ _ _ 34 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 CRE Cre ADJ JJ Degree=Pos _ _ _ _ 39 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 12085 # text = Treatment of the more immature B-cell line, Ramos, with phorbol esters rescues the cells from calcium-dependent apoptosis. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 more more ADV RBR _ _ _ _ _ 5 immature immature ADJ JJ Degree=Pos _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 Ramos Ramos PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 15 esters ester NOUN NNS Number=Plur _ _ _ _ 16 rescues rescue VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 23 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 12086 # text = bcl-2 expression is increased following phorbol ester treatment, and the increased expression is dependent on the CRE site. 1 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 following follow VERB VBG VerbForm=Ger _ _ _ _ 8 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 9 ester ester NOUN NN Number=Sing _ _ _ _ 10 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 CRE Cre ADJ JJ Degree=Pos _ _ _ _ 21 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 12087 # text = These stimuli result in phosphorylation of CREB at serine 133. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 stimuli stimuli NOUN NNS Number=Plur _ _ _ _ 3 result result VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 CREB CREB NOUN NN Number=Sing _ _ _ _ 8 at at ADP IN _ _ _ _ _ 9 serine serine NOUN NN Number=Sing _ _ _ _ 10 133 133 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 12088 # text = The phosphorylation of CREB that results in activation is mediated by protein kinase C rather than by protein kinase A. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 CREB CREB PROPN NNP Number=Sing _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 results result NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 kinase kinase NOUN NN Number=Sing _ _ _ _ 14 C c NOUN NN Number=Sing _ _ _ _ 15 rather rather ADV RB _ _ _ _ _ 16 than than ADP IN _ _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ _ 19 kinase kinase NOUN NN Number=Sing _ _ _ _ 20 A A NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 12089 # text = Although the CRE site is necessary, optimal induction of bcl-2 expression requires participation of the upstream regulatory element, suggesting that phosphorylation of CREB alters its interaction with the upstream regulatory element. 1 Although although SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 CRE CRE NOUN NN Number=Sing _ _ _ _ 4 site site NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 necessary necessary ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 participation participation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 20 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 21 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 24 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 25 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 CREB CREB PROPN NNP Number=Sing _ _ _ _ 28 alters alter VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 30 interaction interaction NOUN NN Number=Sing _ _ _ _ 31 with with ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 34 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 35 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 12090 # text = The CRE site in the bcl-2 promoter appears to play a major role in the induction of bcl-2 expression during the activation of mature B cells and during the rescue of immature B cells from apoptosis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 CRE Cre ADJ JJ Degree=Pos _ _ _ _ 3 site site NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 play play VERB VB VerbForm=Inf _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 major major ADJ JJ Degree=Pos _ _ _ _ 15 role role NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 induction induction NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 during during ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 mature mature ADJ JJ Degree=Pos _ _ _ _ 29 B b ADJ JJ Degree=Pos _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 during during ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 rescue rescue NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 immature immature ADJ JJ Degree=Pos _ _ _ _ 37 B b ADJ JJ Degree=Pos _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ _ 39 from from ADP IN _ _ _ _ _ 40 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 12091 # text = It is possible that the CRE site is responsible for induction of bcl-2 expression in other cell types, particularly those in which protein kinase C is involved. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 possible possible ADJ JJ Degree=Pos _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 CRE Cre NOUN NN Number=Sing _ _ _ _ 7 site site NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 induction induction NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 other other ADJ JJ Degree=Pos _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 particularly particularly ADV RB _ _ _ _ _ 23 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 which which DET WDT PronType=Int _ _ _ _ 26 protein protein NOUN NN Number=Sing _ _ _ _ 27 kinase kinase NOUN NN Number=Sing _ _ _ _ 28 C c NOUN NN Number=Sing _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 involved involved ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12092 # text = Document 0030012824 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012824 0030012824 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12093 # text = Nuclear factor-kappaB-dependent induction of interleukin-8 gene expression by tumor necrosis factor alpha: 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor-kappaB factor-kappab ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 5 induction induction NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 8 8 NUM CD NumType=Card _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 tumor tumor NOUN NN Number=Sing _ _ _ _ 14 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 : : PUNCT : _ _ _ _ _ # sent_id = 12094 # text = evidence for an antioxidant sensitive activating pathway distinct from nuclear translocation. 1 evidence evidence NOUN NN Number=Sing _ _ _ _ 2 for for ADP IN _ _ _ _ _ 3 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 antioxidant antioxidant ADJ JJ Degree=Pos _ _ _ _ 5 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 6 activating activate NOUN NN Number=Sing _ _ _ _ 7 pathway pathway NOUN NN Number=Sing _ _ _ _ 8 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 translocation translocation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12095 # text = Tumor necrosis factor alpha (TNFalpha) is a pluripotent activator of inflammation by inducing a proinflammatory cytokine cascade. 1 Tumor tumor ADP IN _ _ _ _ _ 2 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 alpha alpha NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 pluripotent pluripotent ADJ JJ Degree=Pos _ _ _ _ 11 activator activator NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 14 by by SCONJ IN _ _ _ _ _ 15 inducing induce VERB VBG VerbForm=Ger _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 18 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 19 cascade cascade NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 12096 # text = This phenomenon is mediated, in part, through inducible expression of the CXC chemokine, interleukin-8 (IL-8). 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 phenomenon phenomenon NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 part part ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 through through ADP IN _ _ _ _ _ 10 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 CXC CXC PROPN NNP Number=Sing _ _ _ _ 15 chemokine chemokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 8 8 NUM CD NumType=Card _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - SYM SYM _ _ _ _ SpaceAfter=No 23 8 8 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 12097 # text = In this study, we investigate the role of TNFalpha-inducible reactive oxygen species (ROS) in IL-8 expression by "monocyte-like" U937 histiocytic lymphoma cells. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 investigate investigate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 13 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 14 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 15 species species NOUN NNS Number=Plur _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 ROS Ros X ADD _ _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 8 8 NUM CD NumType=Card _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 " " PUNCT `` _ _ _ _ SpaceAfter=No 26 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 like like INTJ UH _ _ _ _ SpaceAfter=No 29 " " PUNCT `` _ _ _ _ _ 30 U937 U937 NUM CD NumType=Card _ _ _ _ 31 histiocytic histiocytic ADJ JJ Degree=Pos _ _ _ _ 32 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 12098 # text = TNFalpha is a rapid activator of IL-8 gene expression by U937, producing a 50-fold induction of mRNA within 1 hour of treatment. 1 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 5 activator activator NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 8 8 NUM CD NumType=Card _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 U937 U937 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 producing produce VERB VBG VerbForm=Ger _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 fold fold NOUN NN Number=Sing _ _ _ _ 20 induction induction NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 23 within within ADP IN _ _ _ _ _ 24 1 1 NUM CD NumType=Card _ _ _ _ 25 hour hour NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 12099 # text = In gene transfection assays, the effect of TNFalpha requires the presence of an inducible nuclear factor-kappaB (NF-kappaB) (Rel A) binding site in the IL-8 promoter. 1 In in ADP IN _ _ _ _ _ 2 gene gene ADJ JJ Degree=Pos _ _ _ _ 3 transfection transfection NOUN NN Number=Sing _ _ _ _ 4 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 effect effect NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 10 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 presence presence NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 -kappaB -kappaB PROPN NNP Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 Rel Rel NOUN NN Number=Sing _ _ _ _ 26 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 binding bind VERB VBG VerbForm=Ger _ _ _ _ 29 site site NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 8 8 NUM CD NumType=Card _ _ _ _ 35 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 12100 # text = TNFalpha treatment induces a rapid translocation of the 65 kD transcriptional activator NF-kappaB subunit, Rel 1 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 2 treatment treatment NOUN NN Number=Sing _ _ _ _ 3 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 6 translocation translocation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 65 65 NUM CD NumType=Card _ _ _ _ 10 kD kd NOUN NN Number=Sing _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 activator activator NOUN NN Number=Sing _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 16 subunit subunit NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 Rel Rel PROPN NNP Number=Sing _ _ _ _ # sent_id = 12101 # text = A, whose binding in the nucleus occurs before changes in intracellular ROS. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 nucleus nucleus ADJ JJ Degree=Pos _ _ _ _ 8 occurs occur NOUN NNS Number=Plur _ _ _ _ 9 before before ADP IN _ _ _ _ _ 10 changes change NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 13 ROS Ro NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 12102 # text = Pretreatment (or up to 15 minutes posttreatment) relative to TNFalpha with the antioxidant dimethyl sulfoxide (DMSO) (2% [vol/vol]) blocks 80% of NF-kappaB-dependent transcription. 1 Pretreatment Pretreatment NOUN NN Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 or or CCONJ CC _ _ _ _ _ 4 up up ADV RB _ _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 15 15 NUM CD NumType=Card _ _ _ _ 7 minutes minute NOUN NNS Number=Plur _ _ _ _ 8 posttreatment posttreatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 relative relative ADV RB _ _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 antioxidant antioxidant ADJ JJ Degree=Pos _ _ _ _ 16 dimethyl dimethyl NOUN NN Number=Sing _ _ _ _ 17 sulfoxide sulfoxide NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 DMSO DMSO PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 % % SYM NN Number=Sing _ _ _ _ 24 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 vol vol INTJ UH _ _ _ _ SpaceAfter=No 26 / / PUNCT , _ _ _ _ SpaceAfter=No 27 vol vol NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 blocks block NOUN NNS Number=Plur _ _ _ _ 31 80 80 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 % % SYM NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 39 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 12103 # text = Surprisingly, however, DMSO has no effect on inducible Rel A binding. 1 Surprisingly surprisingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 however however ADV RB _ _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 DMSO DMSO PROPN NNP Number=Sing _ _ _ _ 6 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 no no DET DT _ _ _ _ _ 8 effect effect NOUN NN Number=Sing _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 11 Rel Rel NOUN NN Number=Sing _ _ _ _ 12 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 binding binding NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 12104 # text = Similar selective effects on NF-kappaB transcription are seen with the unrelated antioxidants, N-acetylcysteine (NAC) and vitamin C. 1 Similar similar ADJ JJ Degree=Pos _ _ _ _ 2 selective selective ADJ JJ Degree=Pos _ _ _ _ 3 effects effect NOUN NNS Number=Plur _ _ _ _ 4 on on ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 seen see VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 unrelated unrelated ADJ JJ Degree=Pos _ _ _ _ 14 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 N- N- SYM NFP _ _ _ _ SpaceAfter=No 17 acetylcysteine acetylcysteine PRON PRP _ _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 NAC NAC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 vitamin vitamin PROPN NNP Number=Sing _ _ _ _ 23 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 12105 # text = These data indicate that TNFalpha induces a delayed ROS-dependent signalling pathway that is required for NF-kappaB transcriptional activation and is separable from that required for its nuclear translocation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 6 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 delayed delay ADJ JJ Degree=Pos _ _ _ _ 9 ROS Ros NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 signalling signalling NOUN NN Number=Sing _ _ _ _ 13 pathway pathway NOUN NN Number=Sing _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 21 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 separable separable ADJ JJ Degree=Pos _ _ _ _ 26 from from ADP IN _ _ _ _ _ 27 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 28 required require VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 31 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 32 translocation translocation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 12106 # text = Further definition of this pathway will yield new insights into inflammation initiated by TNFalpha signalling. 1 Further further ADJ JJ Degree=Pos _ _ _ _ 2 definition definition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 pathway pathway NOUN NN Number=Sing _ _ _ _ 6 will will AUX MD VerbForm=Fin _ _ _ _ 7 yield yield VERB VB VerbForm=Inf _ _ _ _ 8 new new ADJ JJ Degree=Pos _ _ _ _ 9 insights insight NOUN NNS Number=Plur _ _ _ _ 10 into into ADP IN _ _ _ _ _ 11 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 12 initiated initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 TNFalpha TNFalpha PROPN NNP Number=Sing _ _ _ _ 15 signalling signalling NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12107 # text = Document 0030012826 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012826 0030012826 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12108 # text = Inducible nuclear factor binding to the kappa B elements of the human immunodeficiency virus enhancer in T cells can be blocked by cyclosporin A in a signal-dependent manner. 1 Inducible Inducible ADJ JJ Degree=Pos _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 elements element NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 14 virus virus NOUN NN Number=Sing _ _ _ _ 15 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 can can AUX MD VerbForm=Fin _ _ _ _ 20 be be AUX VB VerbForm=Inf _ _ _ _ 21 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 24 A a NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 -dependent -dependent ADJ JJ Degree=Pos _ _ _ _ 29 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12109 # text = Cyclosporin A (CsA) is thought to exert its immunosuppressive effects by inhibiting the expression of a distinct set of lymphokine genes which are induced upon T-cell activation, among them the gene coding for interleukin-2. 1 Cyclosporin Cyclosporin PROPN NNP Number=Sing _ _ _ _ 2 A a PROPN NNP Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 exert exert VERB VB VerbForm=Inf _ _ _ _ 10 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 11 immunosuppressive immunosuppressive ADJ JJ Degree=Pos _ _ _ _ 12 effects effect NOUN NNS Number=Plur _ _ _ _ 13 by by SCONJ IN _ _ _ _ _ 14 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 20 set set NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 lymphokine lymphokine NOUN NN Number=Sing _ _ _ _ 23 genes gene NOUN NNS Number=Plur _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 upon upon ADP IN _ _ _ _ _ 28 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 among among ADP IN _ _ _ _ _ 33 them they PRON PRP Case=Acc|Number=Plur|Person=3|PronType=Prs _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 gene gene NOUN NN Number=Sing _ _ _ _ 36 coding coding NOUN NN Number=Sing _ _ _ _ 37 for for ADP IN _ _ _ _ _ 38 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 12110 # text = In addition, the activation of the human immunodeficiency virus (HIV) is partially suppressed. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 10 virus virus NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 partially partially ADV RB _ _ _ _ _ 16 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 12111 # text = To better understand the molecular mechanisms underlying suppression by CsA, we have investigated the effects of this drug on transcription factors in T cells. 1 To to ADP IN _ _ _ _ _ 2 better better ADJ JJR Degree=Cmp _ _ _ _ 3 understand understand VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 6 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 7 underlying underly ADJ JJ Degree=Pos _ _ _ _ 8 suppression suppression NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 13 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 effects effect NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 19 drug drug NOUN NN Number=Sing _ _ _ _ 20 on on ADP IN _ _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 factors factor NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 12112 # text = Here we report that the formation of two distinct mitogen-inducible DNA-binding complexes, the kappa B complex within the HIV enhancer and the NFAT-1 complex within the interleukin-2 enhancer, is inhibited in the presence of CsA. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 formation formation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 two two NUM CD NumType=Card _ _ _ _ 9 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 10 mitogen mitogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 13 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 binding binding VERB VBG VerbForm=Ger _ _ _ _ 16 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 complex complex NOUN NN Number=Sing _ _ _ _ 22 within within ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 HIV Hiv PROPN NNP Number=Sing _ _ _ _ 25 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 complex complex NOUN NN Number=Sing _ _ _ _ 32 within within ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 2 2 NUM CD NumType=Card _ _ _ _ 37 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 40 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 presence presence NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 12113 # text = The kappa B-binding activity with the HIV enhancer is inhibited only if it is activated via the mitogen phytohemagglutinin whereas phorbol myristate acetate-mediated activation is completely insensitive to the drug. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 kappa kappa NOUN NN Number=Sing _ _ _ _ 3 B- B- PUNCT , _ _ _ _ SpaceAfter=No 4 binding bind VERB VBG VerbForm=Ger _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 HIV Hiv NOUN NN Number=Sing _ _ _ _ 9 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 only only ADV RB _ _ _ _ _ 13 if if SCONJ IN _ _ _ _ _ 14 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 via via ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 mitogen mitogen ADJ JJ Degree=Pos _ _ _ _ 20 phytohemagglutinin phytohemagglutinin NOUN NN Number=Sing _ _ _ _ 21 whereas whereas SCONJ IN _ _ _ _ _ 22 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 23 myristate myristate NOUN NN Number=Sing _ _ _ _ 24 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ _ 28 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 completely completely ADV RB _ _ _ _ _ 30 insensitive insensitive ADJ JJ Degree=Pos _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 drug drug NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 12114 # text = This suggests a model in which functionally indistinguishable kappa B complexes can be activated via two separate pathways of signal transduction distinguishable by CsA. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 model model NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 which which PRON WDT PronType=Rel _ _ _ _ 7 functionally functionally ADV RB _ _ _ _ _ 8 indistinguishable indistinguishable ADJ JJ Degree=Pos _ _ _ _ 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 complexes complex NOUN NNS Number=Plur _ _ _ _ 12 can can AUX MD VerbForm=Fin _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 via via ADP IN _ _ _ _ _ 16 two two NUM CD NumType=Card _ _ _ _ 17 separate separate ADJ JJ Degree=Pos _ _ _ _ 18 pathways pathway NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 signal signal NOUN NN Number=Sing _ _ _ _ 21 transduction transduction NOUN NN Number=Sing _ _ _ _ 22 distinguishable distinguishable ADJ JJ Degree=Pos _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12115 # text = Document 0030012828 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012828 0030012828 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12116 # text = GrpL, a Grb2-related adaptor protein, interacts with SLP-76 to regulate nuclear factor of activated T cell activation. 1 GrpL Grpl INTJ UH _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 Grb2 grb2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 related related ADJ JJ Degree=Pos _ _ _ _ 7 adaptor adaptor NOUN NN Number=Sing _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 interacts interact NOUN NNS Number=Plur _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 SLP SLP NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 76 76 NUM CD NumType=Card _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12117 # text = Propagation of signals from the T cell antigen receptor (TCR) involves a number of adaptor molecules. 1 Propagation Propagation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 signals signal NOUN NNS Number=Plur _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 T T PROPN NNP Number=Sing _ _ _ _ 7 cell cell NOUN NN Number=Sing _ _ _ _ 8 antigen antigen NUM CD NumType=Card _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 TCR TCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 number number NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 adaptor adaptor NOUN NN Number=Sing _ _ _ _ 18 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 12118 # text = SH2 domain-containing protein 76 (SLP-76) interacts with the guanine nucleotide exchange factor 1 SH2 SH2 NUM CD NumType=Card _ _ _ _ 2 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 containing containing VERB VBG VerbForm=Ger _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 76 76 NUM CD NumType=Card _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 SLP sLp NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 76 76 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 interacts interact NOUN NNS Number=Plur _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 guanine guanine NOUN NN Number=Sing _ _ _ _ 16 nucleotide nucleotide NOUN NN Number=Sing _ _ _ _ 17 exchange exchange NOUN NN Number=Sing _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ # sent_id = 12119 # text = Vav to activate the nuclear factor of activated cells (NF-AT), and its expression is required for normal T cell development. 1 Vav Vave VERB VB Abbr=Yes|VerbForm=Inf _ _ _ _ 2 to to PART TO _ _ _ _ _ 3 activate activate VERB VB VerbForm=Inf _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 normal normal ADJ JJ Degree=Pos _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 12120 # text = We report the cloning and characterization of a novel Grb2-like adaptor molecule designated as Grb2-related protein of the lymphoid system (GrpL). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 cloning cloning NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 characterization characterization NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 novel novel NOUN NN Number=Sing _ _ _ _ 10 Grb2 grb2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 like like ADJ JJ Degree=Pos _ _ _ _ 13 adaptor adaptor NOUN NN Number=Sing _ _ _ _ 14 molecule molecule NOUN NN Number=Sing _ _ _ _ 15 designated designate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 Grb2 grb2 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 related related ADJ JJ Degree=Pos _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 24 system system NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 GrpL GrpL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 12121 # text = Expression of GrpL is restricted to hematopoietic tissues, and it is distinguished from Grb2 by having a proline-rich region. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 GrpL GrpL PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 restricted restrict VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 8 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 distinguished distinguish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 from from ADP IN _ _ _ _ _ 15 Grb2 Grb2 NUM CD NumType=Card _ _ _ _ 16 by by SCONJ IN _ _ _ _ _ 17 having have VERB VBG VerbForm=Ger _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 proline-rich proline-rich ADJ JJ Degree=Pos _ _ _ _ 20 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 12122 # text = GrpL can be coimmunoprecipitated with SLP-76 but not with Sos1 or Sos2 from Jurkat cell lysates. 1 GrpL Grpl NOUN NN Number=Sing _ _ _ _ 2 can can AUX MD VerbForm=Fin _ _ _ _ 3 be be AUX VB VerbForm=Inf _ _ _ _ 4 coimmunoprecipitated coimmunoprecipitate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 SLP sLp NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 76 76 NUM CD NumType=Card _ _ _ _ 9 but but CCONJ CC _ _ _ _ _ 10 not not ADV RB _ _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 Sos1 Sos1 NUM CD NumType=Card _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 Sos2 Sos2 NUM CD NumType=Card _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 lysates lysate NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 12123 # text = In contrast, Grb2 can be coimmunoprecipitated with Sos1 and Sos2 but not with SLP-76. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 Grb2 grb2 NOUN NN Number=Sing _ _ _ _ 5 can can AUX MD VerbForm=Fin _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 coimmunoprecipitated coimmunoprecipitate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 Sos1 Sos1 NUM CD NumType=Card _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 Sos2 Sos2 NUM CD NumType=Card _ _ _ _ 12 but but CCONJ CC _ _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 SLP SLP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 76 76 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 12124 # text = Moreover, tyrosine-phosphorylated LAT/pp36/38 in detergent lysates prepared from anti-CD3 stimulated T cells associated with Grb2 but not GrpL. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 tyrosine tyrosine VERB VB Mood=Imp|VerbForm=Fin _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 phosphorylated phosphorylated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 LAT Lat NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 pp36/38 pp36/38 NUM CD NumType=Card _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 detergent detergent ADJ JJ Degree=Pos _ _ _ _ 11 lysates lysate NOUN NNS Number=Plur _ _ _ _ 12 prepared prepare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 anti-CD3 anti-CD3 NOUN NN Number=Sing _ _ _ _ 15 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 Grb2 Grb2 NOUN NN Number=Sing _ _ _ _ 21 but but CCONJ CC _ _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 GrpL Grpl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 12125 # text = These data reveal the presence of distinct complexes involving GrpL and Grb2 in T cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 reveal reveal VERB VB VerbForm=Inf _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 presence presence NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 8 complexes complexe NOUN NNS Number=Plur _ _ _ _ 9 involving involve VERB VBG VerbForm=Ger _ _ _ _ 10 GrpL Grpl PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 Grb2 Grb2 NUM CD NumType=Card _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 12126 # text = A functional role of the GrpL-SLP-76 complex is suggested by the ability of GrpL to act alone or in concert with SLP-76 to augment NF-AT activation in Jurkat T cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 functional functional ADJ JJ Degree=Pos _ _ _ _ 3 role role NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 GrpL GrpL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 SLP SLP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 76 76 NUM CD NumType=Card _ _ _ _ 11 complex complex NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 suggested suggest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 ability ability NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 GrpL GrpL PROPN NNP Number=Sing _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 act act VERB VB VerbForm=Inf _ _ _ _ 21 alone alone ADJ JJ Degree=Pos _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 concert concert NOUN NN Number=Sing _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 SLP SLP NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 76 76 NUM CD NumType=Card _ _ _ _ 29 to to ADP IN _ _ _ _ _ 30 augment augment NOUN NN Number=Sing _ _ _ _ 31 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 AT at ADP IN _ _ _ _ _ 34 activation activation NOUN NN Number=Sing _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 37 T T PROPN NNP Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12127 # text = Document 0030012829 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012829 0030012829 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12128 # text = Epithelial cell-initiated inflammation plays a crucial role in early tissue damage in amebic infection of human intestine. 1 Epithelial Epithelial ADJ JJ Degree=Pos _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 initiated initiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 6 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 9 role role NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 early early ADJ JJ Degree=Pos _ _ _ _ 12 tissue tissue NOUN NN Number=Sing _ _ _ _ 13 damage damage NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 amebic amebic ADJ JJ Degree=Pos _ _ _ _ 16 infection infection NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 intestine intestine NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12129 # text = BACKGROUND & AIMS: Entamoeba histolytica infection of the intestine can induce severe gut inflammation. 1 BACKGROUND background PROPN NNP Number=Sing _ _ _ _ 2 & & CCONJ CC _ _ _ _ _ 3 AIMS aim PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ 5 Entamoeba Entamoeba PROPN NNP Number=Sing _ _ _ _ 6 histolytica histolytica NOUN NN Number=Sing _ _ _ _ 7 infection infection NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 intestine intestine NOUN NN Number=Sing _ _ _ _ 11 can can AUX MD VerbForm=Fin _ _ _ _ 12 induce induce VERB VB VerbForm=Inf _ _ _ _ 13 severe severe ADJ JJ Degree=Pos _ _ _ _ 14 gut gut NOUN NN Number=Sing _ _ _ _ 15 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 12130 # text = The aims of this study were to assess the role of the host inflammatory response in the tissue damage observed with amebiasis and the role of the intestinal epithelial cell in initiating that response. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 aims aim NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 study study NOUN NN Number=Sing _ _ _ _ 6 were be VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 assess assess VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 role role NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 host host ADV RBS _ _ _ _ _ 14 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 15 response response NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 tissue tissue NOUN NN Number=Sing _ _ _ _ 19 damage damage NOUN NN Number=Sing _ _ _ _ 20 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 amebiasis amebiasis NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 role role NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 intestinal intestinal ADJ JJ Degree=Pos _ _ _ _ 29 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ _ 31 in in SCONJ IN _ _ _ _ _ 32 initiating initiat VERB VBG VerbForm=Ger _ _ _ _ 33 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 34 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 12131 # text = METHODS: E. histolytica infection was established in human intestinal xenografts in severe combined immunodeficient (SCID-HU-INT) mice. 1 METHODS method NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 E. e. PROPN NNP Number=Sing _ _ _ _ 4 histolytica histolytican NOUN NN Number=Sing _ _ _ _ 5 infection infection NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 established establish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 intestinal intestinal ADJ JJ Degree=Pos _ _ _ _ 11 xenografts xenograft NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 severe severe ADJ JJ Degree=Pos _ _ _ _ 14 combined combine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 immunodeficient immunodeficient ADJ JJ Degree=Pos _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 SCID Scid NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 HU- Hu- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 INT INT NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 12132 # text = Human intestinal epithelial cell inflammatory responses to amebic infection were inhibited by the intraluminal administration of an antisense oligonucleotide to the human p65 subunit of nuclear factor kappaB, and the role of neutrophils in tissue damage observed with amebiasis was studied by depleting neutrophils from SCID-HU-INT mice. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 intestinal intestinal ADJ JJ Degree=Pos _ _ _ _ 3 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 6 responses response NOUN NNS Number=Plur _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 amebic amebic ADJ JJ Degree=Pos _ _ _ _ 9 infection infection NOUN NN Number=Sing _ _ _ _ 10 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 intraluminal intraluminal ADJ JJ Degree=Pos _ _ _ _ 15 administration administration NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 antisense antisense NOUN NN Number=Sing _ _ _ _ 19 oligonucleotide oligonucleotide ADV RB _ _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 p65 p65 NOUN NN Number=Sing _ _ _ _ 24 subunit subunit NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ _ 28 kappaB kappaB NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 role role NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 tissue tissue NOUN NN Number=Sing _ _ _ _ 37 damage damage NOUN NN Number=Sing _ _ _ _ 38 observed observe ADJ JJ Degree=Pos _ _ _ _ 39 with with ADP IN _ _ _ _ _ 40 amebiasis amebiasis PRON DT Number=Sing|PronType=Dem _ _ _ _ 41 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 42 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 43 by by SCONJ IN _ _ _ _ _ 44 depleting deplet VERB VBG VerbForm=Ger _ _ _ _ 45 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 46 from from ADP IN _ _ _ _ _ 47 SCID SCID PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 HU Hu PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 INT Int ADJ JJ Degree=Pos _ _ _ _ 52 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 12133 # text = RESULTS: 1 RESULTS result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ # sent_id = 12134 # text = Administration of the antisense oligonucleotide blocked the production of human interleukin 1beta and interleukin 8 by intestinal epithelial cells and inhibited neutrophil influx into the E. 1 Administration Administration NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 antisense antisense ADJ JJ Degree=Pos _ _ _ _ 5 oligonucleotide oligonucleotide NOUN NN Number=Sing _ _ _ _ 6 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 production production NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 beta beta NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 interleukin interleukin ADJ JJ Degree=Pos _ _ _ _ 16 8 8 NUM CD NumType=Card _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 intestinal intestinal ADJ JJ Degree=Pos _ _ _ _ 19 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 24 influx influx NOUN NN Number=Sing _ _ _ _ 25 into into ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 E. E. PROPN NNP Number=Sing _ _ _ _ # sent_id = 12135 # text = histolytica-infected intestinal xenografts. 1 histolytica histolytican AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 2 -infected -infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 intestinal intestinal ADJ JJ Degree=Pos _ _ _ _ 4 xenografts xenograft NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 . . PUNCT . _ _ _ _ _ # sent_id = 12136 # text = Inhibition of the gut inflammatory response by the antisense oligonucleotide or the depletion of neutrophils from SCID-HU- INT mice blocked the increase in intestinal permeability observed with amebic infection. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 gut gut ADJ JJ Degree=Pos _ _ _ _ 5 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 6 response response NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 antisense antisense ADJ JJ Degree=Pos _ _ _ _ 10 oligonucleotide oligonucleotide NOUN NN Number=Sing _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 depletion depletion NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 16 from from ADP IN _ _ _ _ _ 17 SCID SCID PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 HU Hu PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ _ 21 INT Int PROPN NNP Number=Sing _ _ _ _ 22 mice mouse NOUN NNS Number=Plur _ _ _ _ 23 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 increase increase NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 intestinal intestinal ADJ JJ Degree=Pos _ _ _ _ 28 permeability permeability NOUN NN Number=Sing _ _ _ _ 29 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 amebic amebic ADJ JJ Degree=Pos _ _ _ _ 32 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 12137 # text = CONCLUSIONS: Intestinal epithelial cells initiate an inflammatory response with resulting neutrophil-mediated tissue damage in response to E. histolytica infection; this inflammatory cascade can be blocked by inhibiting the transcription of genes regulated by nuclear factor kappaB. 1 CONCLUSIONS conclusion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 : : PUNCT : _ _ _ _ _ 3 Intestinal Intestinal ADJ JJ Degree=Pos _ _ _ _ 4 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 initiate initiate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 9 response response NOUN NN Number=Sing _ _ _ _ 10 with with SCONJ IN _ _ _ _ _ 11 resulting result VERB VBG VerbForm=Ger _ _ _ _ 12 neutrophil neutrophil NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 tissue tissue NOUN NN Number=Sing _ _ _ _ 16 damage damage NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 response response NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 E. e. PROPN NNP Number=Sing _ _ _ _ 21 histolytica histolytica PROPN NNP Number=Sing _ _ _ _ 22 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ; ; PUNCT , _ _ _ _ _ 24 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 25 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 26 cascade cascade NOUN NN Number=Sing _ _ _ _ 27 can can AUX MD VerbForm=Fin _ _ _ _ 28 be be AUX VB VerbForm=Inf _ _ _ _ 29 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 by by SCONJ IN _ _ _ _ _ 31 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 genes gene NOUN NNS Number=Plur _ _ _ _ 36 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 by by ADP IN _ _ _ _ _ 38 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 39 factor factor NOUN NN Number=Sing _ _ _ _ 40 kappaB. kappaB. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12138 # text = Document 0030012841 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012841 0030012841 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12139 # text = Functional Myc-Max heterodimer is required for activation-induced apoptosis in T cell hybridomas. 1 Functional functional ADJ JJ Degree=Pos _ _ _ _ 2 Myc Myc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 Max Max PROPN NNP Number=Sing _ _ _ _ 5 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 hybridomas hybridoma NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12140 # text = T cell hybridomas respond to activation signals by undergoing apoptotic cell death, and this is likely to represent comparable events related to tolerance induction in immature and mature T cells in vivo. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 hybridomas hybridoma NOUN NNS Number=Plur _ _ _ _ 4 respond respond VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 signals signal NOUN NNS Number=Plur _ _ _ _ 8 by by SCONJ IN _ _ _ _ _ 9 undergoing undergo VERB VBG VerbForm=Ger _ _ _ _ 10 apoptotic apoptotic ADJ JJ Degree=Pos _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 death death NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 likely likely ADJ JJ Degree=Pos _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 represent represent VERB VB VerbForm=Inf _ _ _ _ 20 comparable comparable ADJ JJ Degree=Pos _ _ _ _ 21 events event NOUN NNS Number=Plur _ _ _ _ 22 related related ADJ JJ Degree=Pos _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 tolerance tolerance NOUN NN Number=Sing _ _ _ _ 25 induction induction NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 immature immature ADJ JJ Degree=Pos _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 mature mature ADJ JJ Degree=Pos _ _ _ _ 30 T t PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 12141 # text = Previous studies using antisense oligonucleotides implicated the c-Myc protein in the phenomenon of activation-induced apoptosis. 1 Previous previous ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 using use VERB VBG VerbForm=Ger _ _ _ _ 4 antisense antisense ADJ JJ Degree=Pos _ _ _ _ 5 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 6 implicated implicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 Myc Myc NOUN NN Number=Sing _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 phenomenon phenomenon NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 12142 # text = This role for c-Myc in apoptosis is now confirmed in studies using a dominant negative form of its heterodimeric binding partner, Max, which we show here inhibits activation-induced apoptosis. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 Myc Myc NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 now now ADV RB _ _ _ _ _ 11 confirmed confirm VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 studies study NOUN NNS Number=Plur _ _ _ _ 14 using use VERB VBG VerbForm=Ger _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 17 negative negative ADJ JJ Degree=Pos _ _ _ _ 18 form form NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 heterodimeric heterodimeric NOUN NN Number=Sing _ _ _ _ 22 binding binding VERB VBG VerbForm=Ger _ _ _ _ 23 partner partner NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 Max Max PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 which which PRON WDT PronType=Rel _ _ _ _ 28 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 29 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 here here ADV RB PronType=Dem _ _ _ _ 31 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 12143 # text = Further, coexpression of a reciprocally mutant Myc protein capable of forming functional heterodimers with the mutant Max can compensate for the dominant negative activity and restore activation-induced apoptosis. 1 Further further ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 coexpression coexpression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 reciprocally reciprocally ADV RB _ _ _ _ _ 7 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 8 Myc Myc PROPN NNP Number=Sing _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 capable capable ADJ JJ Degree=Pos _ _ _ _ 11 of of SCONJ IN _ _ _ _ _ 12 forming form VERB VBG VerbForm=Ger _ _ _ _ 13 functional functional ADJ JJ Degree=Pos _ _ _ _ 14 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 18 Max Max PROPN NNP Number=Sing _ _ _ _ 19 can can AUX MD VerbForm=Fin _ _ _ _ 20 compensate compensate VERB VB VerbForm=Inf _ _ _ _ 21 for for ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 24 negative negative ADJ JJ Degree=Pos _ _ _ _ 25 activity activity NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 restore restore VERB VB VerbForm=Inf _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 12144 # text = These results imply that Myc promotes activation-induced apoptosis by obligatory heterodimerization with Max, and therefore, by regulating gene transcription. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 imply imply ADV RB _ _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Myc Myc PROPN NNP Number=Sing _ _ _ _ 6 promotes promote VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 obligatory obligatory ADJ JJ Degree=Pos _ _ _ _ 13 heterodimerization heterodimerization NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 Max Max PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 therefore therefore ADV RB _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 by by SCONJ IN _ _ _ _ _ 21 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 22 gene gene ADJ JJ Degree=Pos _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12145 # text = Document 0030012842 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012842 0030012842 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12146 # text = A novel heterodimerization partner for thyroid hormone receptor. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 novel novel NOUN NN Number=Sing _ _ _ _ 3 heterodimerization heterodimerization NOUN NN Number=Sing _ _ _ _ 4 partner partner NOUN NN Number=Sing _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 thyroid thyroid NOUN NN Number=Sing _ _ _ _ 7 hormone hormone NOUN NN Number=Sing _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ _ # sent_id = 12147 # text = Peroxisome proliferator-activated receptor. 1 Peroxisome Peroxisome DET DT _ _ _ _ _ 2 proliferator proliferator NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12148 # text = Retinoid-like receptors play a central role in hormonal responses by forming heterodimers with other nuclear hormone receptors. 1 Retinoid Retinoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 like like ADJ JJ Degree=Pos _ _ _ _ 4 receptors receptor NOUN NNS Number=Plur _ _ _ _ 5 play play VERB VB VerbForm=Inf _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 central central ADJ JJ Degree=Pos _ _ _ _ 8 role role NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 hormonal hormonal ADJ JJ Degree=Pos _ _ _ _ 11 responses response NOUN NNS Number=Plur _ _ _ _ 12 by by SCONJ IN _ _ _ _ _ 13 forming form VERB VBG VerbForm=Ger _ _ _ _ 14 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 other other ADJ JJ Degree=Pos _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 hormone hormone NOUN NN Number=Sing _ _ _ _ 19 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 12149 # text = In this study we have identified the peroxisome proliferator-activated receptor (PPAR) as a new thyroid hormone receptor (THR) auxiliary nuclear protein, heterodimerizing with THR in solution. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 peroxisome peroxisome ADJ JJ Degree=Pos _ _ _ _ 9 proliferator proliferator NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 PPAR PPAR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 new new ADJ JJ Degree=Pos _ _ _ _ 19 thyroid thyroid NOUN NN Number=Sing _ _ _ _ 20 hormone hormone NOUN NN Number=Sing _ _ _ _ 21 receptor receptor NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 THR Thr NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 auxiliary auxiliary ADJ JJ Degree=Pos _ _ _ _ 26 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 27 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 heterodimerizing heterodimerize VERB VBG VerbForm=Ger _ _ _ _ 30 with with ADP IN _ _ _ _ _ 31 THR Thr NOUN NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 solution solution NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 12150 # text = Although these heterodimers do not recognize a classical thyroid hormone response element (TRE) characterized by direct repeat separated by four nucleotides (DR+4), PPAR behaves as a dominant negative regulator of thyroid hormone (TH) action. 1 Although although SCONJ IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 4 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 recognize recognize VERB VB VerbForm=Inf _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 classical classical ADJ JJ Degree=Pos _ _ _ _ 9 thyroid thyroid NOUN NN Number=Sing _ _ _ _ 10 hormone hormone NOUN NN Number=Sing _ _ _ _ 11 response response NOUN NN Number=Sing _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 TRE tre NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 direct direct ADJ JJ Degree=Pos _ _ _ _ 19 repeat repeat NOUN NN Number=Sing _ _ _ _ 20 separated separate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 four four NUM CD NumType=Card _ _ _ _ 23 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 DR Dr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 + + SYM SYM _ _ _ _ SpaceAfter=No 27 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 PPAR PPAR PROPN NNP Number=Sing _ _ _ _ 31 behaves behave VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 as as ADP IN _ _ _ _ _ 33 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 35 negative negative ADJ JJ Degree=Pos _ _ _ _ 36 regulator regulator NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 thyroid thyroid NOUN NN Number=Sing _ _ _ _ 39 hormone hormone NOUN NN Number=Sing _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 TH th NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 action action NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 12151 # text = However, a TH-dependent positive effect is elicited by selective interaction of the THR beta-PPAR but not the THR alpha-PPAR heterodimer with a novel TRE (DR+2). 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 TH th NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 7 positive positive ADJ JJ Degree=Pos _ _ _ _ 8 effect effect NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 elicited elicit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 selective selective ADJ JJ Degree=Pos _ _ _ _ 13 interaction interaction NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 THR Thr PROPN NNP Number=Sing _ _ _ _ 17 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 PPAR Ppar NOUN NN Number=Sing _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 THR Thr NOUN NN Number=Sing _ _ _ _ 24 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 PPAR Ppar NOUN NN Number=Sing _ _ _ _ 27 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 novel novel NOUN NN Number=Sing _ _ _ _ 31 TRE Tre NOUN NN Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 DR dr NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 + + SYM SYM _ _ _ _ SpaceAfter=No 35 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 12152 # text = The critical region of THR beta was mapped to 3 amino acids in the distal box of the DNA binding domain. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 critical critical ADJ JJ Degree=Pos _ _ _ _ 3 region region NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 THR Thr NOUN NN Number=Sing _ _ _ _ 6 beta beta NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 mapped map VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 3 3 NUM CD NumType=Card _ _ _ _ 11 amino amino DET DT _ _ _ _ _ 12 acids acid NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 distal distal ADJ JJ Degree=Pos _ _ _ _ 16 box box NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 DNA dna NOUN NN Number=Sing _ _ _ _ 20 binding binding VERB VBG VerbForm=Ger _ _ _ _ 21 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 12153 # text = Hence, PPAR can positively or negatively influence TH action depending on TRE structure and THR isotype. 1 Hence hence ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 PPAR PPAR PROPN NNP Number=Sing _ _ _ _ 4 can can AUX MD VerbForm=Fin _ _ _ _ 5 positively positively ADV RB _ _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 negatively negatively ADV RB _ _ _ _ _ 8 influence influence NOUN NN Number=Sing _ _ _ _ 9 TH th NOUN NN Number=Sing _ _ _ _ 10 action action NOUN NN Number=Sing _ _ _ _ 11 depending depend VERB VBG VerbForm=Ger _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 TRE Tre NOUN NN Number=Sing _ _ _ _ 14 structure structure NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 THR Thr NOUN NN Number=Sing _ _ _ _ 17 isotype isotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12154 # text = Document 0030012845 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012845 0030012845 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12155 # text = Purification of TCF-1 alpha, a T-cell-specific transcription factor that activates the T-cell receptor C alpha gene enhancer in a context-dependent manner. 1 Purification Purification NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 TCF TCF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 receptor receptor NOUN NN Number=Sing _ _ _ _ 21 C c X GW _ _ _ _ _ 22 alpha alpha ADV RB _ _ _ _ _ 23 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 context context NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 30 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12156 # text = The differentiation of T cells into functionally diverse subpopulations is controlled in part, by transcriptional activation and silencing; however, little is known in detail about the proteins that influence this developmental process. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 into into ADP IN _ _ _ _ _ 7 functionally functionally ADV RB _ _ _ _ _ 8 diverse diverse ADJ JJ Degree=Pos _ _ _ _ 9 subpopulations subpopulation NOUN NNS Number=Plur _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 part part NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 silencing silencing NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ; ; PUNCT , _ _ _ _ _ 21 however however ADV RB _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 little little ADJ JJ Degree=Pos _ _ _ _ 24 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 detail detail NOUN NN Number=Sing _ _ _ _ 28 about about ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 proteins protein NOUN NNS Number=Plur _ _ _ _ 31 that that PRON WDT PronType=Rel _ _ _ _ 32 influence influence VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 34 developmental developmental ADJ JJ Degree=Pos _ _ _ _ 35 process process NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 12157 # text = We have purified a new T-cell-specific factor, TCF-1 alpha, that is implicated in the activation of genes encoding a major component of the human T-cell receptor (TCR). 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 new new ADJ JJ Degree=Pos _ _ _ _ 6 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 TCF TCF NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 implicated implicated ADJ JJ Degree=Pos _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 genes gene NOUN NNS Number=Plur _ _ _ _ 25 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 major major ADJ JJ Degree=Pos _ _ _ _ 28 component component NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 human human ADJ JJ Degree=Pos _ _ _ _ 32 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 cell cell NOUN NN Number=Sing _ _ _ _ 34 receptor receptor NOUN NN Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 TCR TCR NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 12158 # text = TCF-1 alpha, originally identified and purified through its binding sites on the HIV-1 promoter, was found to bind to the TCR alpha enhancer and to promoters for several genes expressed at significantly earlier stages of T-cell development than the TCR alpha gene (e.g., p56lck and CD3 delta). 1 TCF Tcf NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 originally originally ADV RB _ _ _ _ _ 7 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 through through ADP IN _ _ _ _ _ 11 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 sites site NOUN NNS Number=Plur _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 bind bind VERB VB VerbForm=Inf _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 TCR Tcr NOUN NN Number=Sing _ _ _ _ 28 alpha alpha NOUN NN Number=Sing _ _ _ _ 29 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 promoters promoter NOUN NNS Number=Plur _ _ _ _ 33 for for ADP IN _ _ _ _ _ 34 several several ADJ JJ Degree=Pos _ _ _ _ 35 genes gene NOUN NNS Number=Plur _ _ _ _ 36 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 at at ADP IN _ _ _ _ _ 38 significantly significantly ADV RB _ _ _ _ _ 39 earlier earlier ADJ JJR Degree=Cmp _ _ _ _ 40 stages stage NOUN NNS Number=Plur _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 cell cell NOUN NN Number=Sing _ _ _ _ 44 development development NOUN NN Number=Sing _ _ _ _ 45 than than ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 TCR Tcr PROPN NNP Number=Sing _ _ _ _ 48 alpha alpha NOUN NN Number=Sing _ _ _ _ 49 gene gene NOUN NN Number=Sing _ _ _ _ 50 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 51 e.g. e.g. X FW _ _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 p56lck p56lck NOUN NN Number=Sing _ _ _ _ 54 and and CCONJ CC _ _ _ _ _ 55 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 56 delta delta NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 12159 # text = Sequences related to the TCF-1 alpha binding motif (5'-GGCACCCTTTGA-3') are also found in the human TCR delta (and possibly TCR beta) enhancers. 1 Sequences Sequences NOUN NNS Number=Plur _ _ _ _ 2 related related ADJ JJ Degree=Pos _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 TCF TCF NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 alpha alpha NOUN NN Number=Sing _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 motif motif NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 '-GGCACCCTTTGA '-GGCACCCTTTGa NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - SYM SYM _ _ _ _ SpaceAfter=No 15 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 also also ADV RB _ _ _ _ _ 20 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 TCR TCR NOUN NN Number=Sing _ _ _ _ 25 delta delta NOUN NN Number=Sing _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 and and CCONJ CC _ _ _ _ _ 28 possibly possibly ADV RB _ _ _ _ _ 29 TCR Tcr ADJ JJR Degree=Cmp _ _ _ _ 30 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 enhancers enhancer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 12160 # text = Southwestern and gel renaturation experiments with the use of purified protein fractions revealed that TCF-1 alpha activity is derived from a family of 57- to 53-kD proteins that are abundantly expressed in mature and immature T-cell lines (Jurkat, CCRF-CEM) and not in mature B cells (JY, Namalwa) or nonlymphoid (HeLa) cell lines. 1 Southwestern southwestern ADJ JJ Degree=Pos _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 gel gel ADJ JJ Degree=Pos _ _ _ _ 4 renaturation renaturation NOUN NN Number=Sing _ _ _ _ 5 experiments experiment NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 use use NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 fractions fraction NOUN NNS Number=Plur _ _ _ _ 13 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 TCF TCF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 alpha alpha NOUN NN Number=Sing _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 derived derive VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 from from ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 family family NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 57 57 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - SYM SYM _ _ _ _ _ 28 to to ADP IN _ _ _ _ _ 29 53 53 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kD k NOUN NN Number=Sing _ _ _ _ 32 proteins protein NOUN NNS Number=Plur _ _ _ _ 33 that that PRON WDT PronType=Rel _ _ _ _ 34 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 35 abundantly abundantly ADV RB _ _ _ _ _ 36 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 mature mature ADJ JJ Degree=Pos _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 immature immature ADJ JJ Degree=Pos _ _ _ _ 41 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 cell cell NOUN NN Number=Sing _ _ _ _ 43 lines line NOUN NNS Number=Plur _ _ _ _ 44 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 45 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 CCRF CCRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 CEM CEM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 not not ADV RB _ _ _ _ _ 53 in in ADP IN _ _ _ _ _ 54 mature mature ADJ JJ Degree=Pos _ _ _ _ 55 B b ADJ JJ Degree=Pos _ _ _ _ 56 cells cell NOUN NNS Number=Plur _ _ _ _ 57 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 58 JY JY PROPN NNP Number=Sing _ _ _ SpaceAfter=No 59 , , PUNCT , _ _ _ _ _ 60 Namalwa Namalwa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 61 ) ) PUNCT -RRB- _ _ _ _ _ 62 or or CCONJ CC _ _ _ _ _ 63 nonlymphoid nonlymphoid NOUN NN Number=Sing _ _ _ _ 64 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 65 HeLa HeLa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 66 ) ) PUNCT -RRB- _ _ _ _ _ 67 cell cell NOUN NN Number=Sing _ _ _ _ 68 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 69 . . PUNCT . _ _ _ _ _ # sent_id = 12161 # text = A small 95-bp fragment of the TCR alpha control region that contains the TCF-1 alpha binding site juxtaposed between a cAMP-response element (the CRE or T alpha 1 motif) and the binding site for a distinct lymphoid-specific protein (TCF-2 alpha) behaved as a potent T-cell-specific enhancer in vivo. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 small small ADJ JJ Degree=Pos _ _ _ _ 3 95 95 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 bp bp NOUN NN Number=Sing _ _ _ _ 6 fragment fragment NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 TCR TCR PROPN NNP Number=Sing _ _ _ _ 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 control control NOUN NN Number=Sing _ _ _ _ 12 region region NOUN NN Number=Sing _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 TCF Tcf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 alpha alpha NOUN NN Number=Sing _ _ _ _ 20 binding bind VERB VBG VerbForm=Ger _ _ _ _ 21 site site NOUN NN Number=Sing _ _ _ _ 22 juxtaposed juxtapose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 between between ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 cAMP camp NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 response response NOUN NN Number=Sing _ _ _ _ 28 element element NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 CRE CRE PROPN NNP Number=Sing _ _ _ _ 32 or or CCONJ CC _ _ _ _ _ 33 T T PROPN NNP Number=Sing _ _ _ _ 34 alpha alpha ADV RB _ _ _ _ _ 35 1 1 NUM CD NumType=Card _ _ _ _ 36 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 ) ) PUNCT -RRB- _ _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 binding bind VERB VBG VerbForm=Ger _ _ _ _ 41 site site NOUN NN Number=Sing _ _ _ _ 42 for for ADP IN _ _ _ _ _ 43 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 44 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 45 lymphoid lymphoid NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 47 protein protein NOUN NN Number=Sing _ _ _ _ 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 TCF Tcf NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 2 2 NUM CD NumType=Card _ _ _ _ 52 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 ) ) PUNCT -RRB- _ _ _ _ _ 54 behaved behave VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 55 as as ADP IN _ _ _ _ _ 56 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 57 potent potent NOUN NN Number=Sing _ _ _ _ 58 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 61 specific specific ADJ JJ Degree=Pos _ _ _ _ 62 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 63 in in ADP IN _ _ _ _ _ 64 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 65 . . PUNCT . _ _ _ _ _ # sent_id = 12162 # text = Tandem copies of this enhancer functioned synergistically in mature (Jurkat) T-cell lines as well as resting and activated immature (CCRF-CEM) T-cell lines. 1 Tandem tandem NOUN NN Number=Sing _ _ _ _ 2 copies copy NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 6 functioned function VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 synergistically synergistically ADV RB _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 mature mature NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 T- T- SYM NFP _ _ _ _ SpaceAfter=No 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 lines line NOUN NNS Number=Plur _ _ _ _ 16 as as ADV RB _ _ _ _ _ 17 well well ADV RB Degree=Pos _ _ _ _ 18 as as SCONJ IN _ _ _ _ _ 19 resting rest VERB VBG VerbForm=Ger _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 immature immature NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 CCRF CCRF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 CEM CEM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 T- T- SYM NFP _ _ _ _ SpaceAfter=No 29 cell cell NOUN NN Number=Sing _ _ _ _ 30 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 12163 # text = Mutation of the TCF-1 alpha binding site diminished enhancer activity and disrupted the synergism observed in vivo between tandem enhancer repeats. 1 Mutation Mutation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 TCF TCF NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 site site NOUN NN Number=Sing _ _ _ _ 10 diminished diminish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 disrupted disrupt VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 synergism synergism NOUN NN Number=Sing _ _ _ _ 17 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 vivo vivo NOUN NN Number=Sing _ _ _ _ 20 between between ADP IN _ _ _ _ _ 21 tandem tandem NOUN NN Number=Sing _ _ _ _ 22 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 23 repeats repeat NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 12164 # text = The TCF-1 alpha binding site was also required for TCR alpha enhancer activity in transcriptionally active extracts from Jurkat but not HeLa cells, confirming that TCF-1 alpha is a T-cell-specific transcription factor. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 TCF Tcf NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 alpha alpha NOUN NN Number=Sing _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 site site NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 also also ADV RB _ _ _ _ _ 10 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 TCR Tcr ADJ JJR Degree=Cmp _ _ _ _ 13 alpha alpha NOUN NN Number=Sing _ _ _ _ 14 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 transcriptionally transcriptionally ADV RB _ _ _ _ _ 18 active active ADJ JJ Degree=Pos _ _ _ _ 19 extracts extract NOUN NNS Number=Plur _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 not not PART RB _ _ _ _ _ 24 HeLa Hela PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 confirming confirm VERB VBG VerbForm=Ger _ _ _ _ 28 that that SCONJ IN _ _ _ _ _ 29 TCF TCF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - SYM SYM _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 alpha alpha NOUN NN Number=Sing _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 -specific -specific ADJ JJ Degree=Pos _ _ _ _ 38 transcription transcription NOUN NN Number=Sing _ _ _ _ 39 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 12165 # text = Curiously, the TCF-1 alpha binding element was inactive in vivo when removed from its neighboring elements on the TCR alpha enhancer and positioned in one or more copies upstream of a heterologous promoter. 1 Curiously Curiously ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 TCF TCF NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 alpha alpha NOUN NN Number=Sing _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 element element NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 vivo vivo NOUN NN Number=Sing _ _ _ _ 14 when when ADV WRB PronType=Int _ _ _ _ 15 removed remove VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 from from ADP IN _ _ _ _ _ 17 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 neighboring neighbor VERB VBG VerbForm=Ger _ _ _ _ 19 elements element NOUN NNS Number=Plur _ _ _ _ 20 on on ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 TCR TCR NOUN NN Number=Sing _ _ _ _ 23 alpha alpha ADP IN _ _ _ _ _ 24 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 positioned position VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 one one NUM CD NumType=Card _ _ _ _ 29 or or CCONJ CC _ _ _ _ _ 30 more more ADJ JJR Degree=Cmp _ _ _ _ 31 copies copy NOUN NNS Number=Plur _ _ _ _ 32 upstream upstream NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 35 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 36 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 12166 # text = Thus, the transcriptional activity of TCF-1 alpha appears to depend on the TCF-2 alpha and T alpha 1 (CREB) transcription factors and the context of its binding site within the TCR alpha enhancer. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 TCF TCF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 depend depend VERB VB VerbForm=Inf _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 TCF Tcf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ _ 19 alpha alpha NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 T t PROPN NNP Number=Sing _ _ _ _ 22 alpha alpha NOUN NN Number=Sing _ _ _ _ 23 1 1 NUM CD NumType=Card _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 CREB CREB NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 factors factor NOUN NNS Number=Plur _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 context context NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 34 binding bind VERB VBG VerbForm=Ger _ _ _ _ 35 site site NOUN NN Number=Sing _ _ _ _ 36 within within ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 TCR Tcr NOUN NN Number=Sing _ _ _ _ 39 alpha alpha ADP IN _ _ _ _ _ 40 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12167 # text = Document 0030012850 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012850 0030012850 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12168 # text = Induction of CIITA and modification of in vivo HLA-DR promoter occupancy in normal thymic epithelial cells treated with IFN-gamma: similarities and distinctions with respect to HLA-DR-constitutive B cells. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 CIITA CIITa NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 modification modification NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 vivo vivo PROPN NNP Number=Sing _ _ _ _ 9 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 DR dr PROPN NNP Number=Sing _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 occupancy occupancy NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 normal normal ADJ JJ Degree=Pos _ _ _ _ 16 thymic thymic ADJ JJ Degree=Pos _ _ _ _ 17 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 IFN Ifn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 : : PUNCT : _ _ _ _ _ 25 similarities similarity NOUN NNS Number=Plur _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 distinctions distinction NOUN NNS Number=Plur _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 respect respect NOUN NN Number=Sing _ _ _ _ 30 to to ADP IN _ _ _ _ _ 31 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 DR- DR- SYM NFP _ _ _ _ SpaceAfter=No 34 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 35 B b ADJ JJ Degree=Pos _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12169 # text = In this study, the IFN-gamma induction of MHC class II gene expression in primary cultures of thymic epithelial cells (TEC) was analyzed. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 IFN Ifn ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 gamma gamma NOUN NN Number=Sing _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 MHC MHC PROPN NNP Number=Sing _ _ _ _ 12 class class NOUN NN Number=Sing _ _ _ _ 13 II ii NUM CD NumType=Card _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 primary primary ADJ JJ Degree=Pos _ _ _ _ 18 cultures culture NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 thymic thymic ADJ JJ Degree=Pos _ _ _ _ 21 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 TEC TEC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 12170 # text = This cellular system offers the advantage that MHC class II induction is studied in a "physiologic" cell lineage that, as a result of this expression within the thymus, is thought to participate to the selection and maturation of the T cells. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 3 system system NOUN NN Number=Sing _ _ _ _ 4 offers offer VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 advantage advantage NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 MHC MHC PROPN NNP Number=Sing _ _ _ _ 9 class class NOUN NN Number=Sing _ _ _ _ 10 II ii NUM CD NumType=Card _ _ _ _ 11 induction induction NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 " " PUNCT `` _ _ _ _ SpaceAfter=No 17 physiologic physiologic NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 " " PUNCT '' _ _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 lineage lineage NOUN NN Number=Sing _ _ _ _ 21 that that PRON WDT PronType=Rel _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 as as ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 result result NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 within within ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 thymus thymus NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 participate participate VERB VB VerbForm=Inf _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 selection selection NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 maturation maturation NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 T t PROPN NNP Number=Sing _ _ _ _ 45 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 12171 # text = It was found that the MHC class II gene expression was associated with the de novo transcription of the gene encoding the CIITA trans-activator, a crucial MHC class II gene regulatory factor. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 MHC MHC PROPN NNP Number=Sing _ _ _ _ 7 class class NOUN NN Number=Sing _ _ _ _ 8 II ii NUM CD NumType=Card _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 de de NOUN NN Number=Sing _ _ _ _ 16 novo novo NOUN NN Number=Sing _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 CIITA CIITA NOUN NN Number=Sing _ _ _ _ 24 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 activator activator NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 30 MHC MHC PROPN NNP Number=Sing _ _ _ _ 31 class class NOUN NN Number=Sing _ _ _ _ 32 II ii NUM CD NumType=Card _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ _ 34 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 12172 # text = Furthermore, the anatomy of interaction between the MHC class II DRA promoter and corresponding binding factors was analyzed by in vivo DNAse I footprint. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 anatomy anatomy NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 interaction interaction NOUN NN Number=Sing _ _ _ _ 7 between between ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 MHC MHC PROPN NNP Number=Sing _ _ _ _ 10 class class NOUN NN Number=Sing _ _ _ _ 11 II ii NUM CD NumType=Card _ _ _ _ 12 DRA DRa NOUN NN Number=Sing _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 corresponding correspond VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 factors factor NOUN NNS Number=Plur _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 vivo vivo NOUN NN Number=Sing _ _ _ _ 23 DNAse DNAse NOUN NN Number=Sing _ _ _ _ 24 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 25 footprint footprint VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 12173 # text = It was found that treatment with IFN-gamma induces changes in the occupancy of the DRA gene regulatory sequences by nuclear factors. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 treatment treatment NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 gamma gamma NOUN NN Number=Sing _ _ _ _ 10 induces induce NOUN NNS Number=Plur _ _ _ _ 11 changes change NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 occupancy occupancy NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 DRA DRA PROPN NNP Number=Sing _ _ _ _ 18 gene gene VERB VB VerbForm=Inf _ _ _ _ 19 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 20 sequences sequence NOUN NNS Number=Plur _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 23 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 12174 # text = The resulting occupancy displays strong similarities with the one observed in the MHC class II-constitutive 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 resulting result VERB VBG VerbForm=Ger _ _ _ _ 3 occupancy occupancy NOUN NN Number=Sing _ _ _ _ 4 displays display NOUN NNS Number=Plur _ _ _ _ 5 strong strong ADJ JJ Degree=Pos _ _ _ _ 6 similarities similarity NOUN NNS Number=Plur _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 one one NOUN NN Number=Sing _ _ _ _ 10 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 MHC MHC PROPN NNP Number=Sing _ _ _ _ 14 class class NOUN NN Number=Sing _ _ _ _ 15 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT : _ _ _ _ SpaceAfter=No 17 constitutive constitutive NOUN NN Number=Sing _ _ _ _ # sent_id = 12175 # text = B cells, represented by both the Burkitt lymphoma line Raji and normal tonsil- derived B cells. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 represented represent VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 both both CCONJ CC _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 Burkitt Burkitt PROPN NNP Number=Sing _ _ _ _ 9 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 10 line line NOUN NN Number=Sing _ _ _ _ 11 Raji Raji PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 normal normal ADJ JJ Degree=Pos _ _ _ _ 14 tonsil tonsil NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ _ 16 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 B b ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 12176 # text = However, some peculiar differences were observed between the TEC, either IFN-gamma-induced or not, and the constitutive B cells. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 some some DET DT _ _ _ _ _ 4 peculiar peculiar ADJ JJ Degree=Pos _ _ _ _ 5 differences difference NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 between between ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 TEC Tec NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 either either CCONJ CC _ _ _ _ _ 13 IFN- IFN- SYM SYM _ _ _ _ SpaceAfter=No 14 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 not not PART RB _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 23 B b ADJ JJ Degree=Pos _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 12177 # text = These results suggest that both common mechanisms, such as the one mediated by the CIITA trans-activator, and distinct tissue-specific constraints contribute to the transcriptional control of constitutive and IFN-gamma-induced MHC class II gene expression. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 both both DET DT _ _ _ _ _ 6 common common ADJ JJ Degree=Pos _ _ _ _ 7 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 such such ADJ JJ Degree=Pos _ _ _ _ 10 as as ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 one one NOUN NN Number=Sing _ _ _ _ 13 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 CIITA CIITA NOUN NN Number=Sing _ _ _ _ 17 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 activator activator NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 23 tissue- tissue- PUNCT , _ _ _ _ SpaceAfter=No 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 constraints constraint NOUN NNS Number=Plur _ _ _ _ 26 contribute contribute VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 30 control control NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 IFN-gamma IFN-gamma PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 MHC MHC PROPN NNP Number=Sing _ _ _ _ 38 class class NOUN NN Number=Sing _ _ _ _ 39 II ii NUM CD NumType=Card _ _ _ _ 40 gene gene NOUN NN Number=Sing _ _ _ _ 41 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12178 # text = Document 0030012854 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012854 0030012854 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12179 # text = Glucocorticoid-mediated repression of cytokine gene transcription in human arteritis-SCID chimeras. 1 Glucocorticoid Glucocorticoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 mediated mediated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 repression repression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 arteritis arteritis NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 SCID Scid NOUN NN Number=Sing _ _ _ _ 14 chimeras chimera NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12180 # text = Giant cell arteritis (GCA) is a vasculitic syndrome that preferentially affects medium and large-sized arteries. 1 Giant giant ADJ JJ Degree=Pos _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 arteritis arteritis NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 GCA GCA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 vasculitic vasculitic ADJ JJ Degree=Pos _ _ _ _ 10 syndrome syndrome NOUN NN Number=Sing _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 preferentially preferentially ADV RB _ _ _ _ _ 13 affects affect VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 medium medium ADJ JJ Degree=Pos _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 large large ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 sized size VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 arteries artery NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 12181 # text = Glucocorticoid therapy resolves clinical symptoms within hours to days, but therapy has to be continued over several years to prevent disease relapses. 1 Glucocorticoid Glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 2 therapy therapy NOUN NN Number=Sing _ _ _ _ 3 resolves resolf VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 5 symptoms symptom NOUN NNS Number=Plur _ _ _ _ 6 within within ADP IN _ _ _ _ _ 7 hours hour NOUN NNS Number=Plur _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 days day NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 therapy therapy NOUN NN Number=Sing _ _ _ _ 13 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 continued continue VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 over over ADP IN _ _ _ _ _ 18 several several ADJ JJ Degree=Pos _ _ _ _ 19 years year NOUN NNS Number=Plur _ _ _ _ 20 to to PART TO _ _ _ _ _ 21 prevent prevent VERB VB VerbForm=Inf _ _ _ _ 22 disease disease NOUN NN Number=Sing _ _ _ _ 23 relapses relaps NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 12182 # text = It is not known whether and how glucocorticoids affect the function of the inflammatory infiltrate or why the disease persists subclinically despite chronic treatment. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 not not PART RB _ _ _ _ _ 4 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 whether whether SCONJ IN _ _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 how how ADV WRB PronType=Int _ _ _ _ 8 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 9 affect affect VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 function function NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 15 infiltrate infiltrate NOUN NN Number=Sing _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 why why ADV WRB PronType=Int _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 disease disease NOUN NN Number=Sing _ _ _ _ 20 persists persist NOUN NNS Number=Plur _ _ _ _ 21 subclinically subclinically ADV RB _ _ _ _ _ 22 despite despite ADP IN _ _ _ _ _ 23 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 24 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 12183 # text = GCA is self-sustained in temporal arteries engrafted into SCID mice, providing a model in which the mechanisms of action and limitations of glucocorticoid therapy can be examined in vivo. 1 GCA GCa PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 self self NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 sustained sustain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 temporal temporal ADJ JJ Degree=Pos _ _ _ _ 8 arteries arteries NOUN NNS Number=Plur _ _ _ _ 9 engrafted engraft VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 into into ADP IN _ _ _ _ _ 11 SCID Scid NOUN NN Number=Sing _ _ _ _ 12 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 providing provide VERB VBG VerbForm=Ger _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 model model NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 action action NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 limitations limitation NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 27 therapy therapy NOUN NN Number=Sing _ _ _ _ 28 can can AUX MD VerbForm=Fin _ _ _ _ 29 be be AUX VB VerbForm=Inf _ _ _ _ 30 examined examin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 vivo. vivo. NOUN NN Number=Sing _ _ _ _ # sent_id = 12184 # text = Administration of dexamethasone to temporal artery-SCID chimeras for 1 wk induced a partial suppression of T cell and macrophage function as indicated by the reduced tissue concentrations of IL-2, IL-1beta, and IL-6 mRNA, and by the diminished expression of inducible NO synthase. 1 Administration Administration NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 temporal temporal ADJ JJ Degree=Pos _ _ _ _ 6 artery artery NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 SCID Scid NOUN NN Number=Sing _ _ _ _ 9 chimeras chimera NOUN NNS Number=Plur _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 1 1 NUM CD NumType=Card _ _ _ _ 12 wk wk NOUN NN Number=Sing _ _ _ _ 13 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 partial partial ADJ JJ Degree=Pos _ _ _ _ 16 suppression suppression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 22 function function NOUN NN Number=Sing _ _ _ _ 23 as as SCONJ IN _ _ _ _ _ 24 indicated indicate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 tissue tissue NOUN NN Number=Sing _ _ _ _ 29 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 6 6 NUM CD NumType=Card _ _ _ _ 44 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 by by ADP IN _ _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 diminished diminished VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 50 expression expression NOUN NN Number=Sing _ _ _ _ 51 of of ADP IN _ _ _ _ _ 52 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 53 NO no ADJ JJ Degree=Pos _ _ _ _ 54 synthase synthase NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 12185 # text = In contrast, synthesis of IFN-gamma mRNA was only slightly decreased, and expression of TGF-beta1 was unaffected. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IFN IFN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 gamma gamma PROPN NNP Number=Sing _ _ _ _ 9 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 only only ADV RB _ _ _ _ _ 12 slightly slightly ADV RB _ _ _ _ _ 13 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 beta1 beta1 NOUN NN Number=Sing _ _ _ _ 21 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 unaffected unaffected ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 12186 # text = These findings correlated with activation of the IkappaBalpha gene and blockade of the nuclear translocation of NFkappaB in the xenotransplanted tissue. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 blockade blockade NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 translocation translocation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 xenotransplanted xenotransplant VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 12187 # text = Dose-response experiments suggested that steroid doses currently used in clinical medicine are suboptimal in repressing NFkappaB-mediated cytokine production in the inflammatory lesions. 1 Dose Dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 response response NOUN NN Number=Sing _ _ _ _ 4 experiments experiment NOUN NNS Number=Plur _ _ _ _ 5 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 steroid steroid ADJ JJ Degree=Pos _ _ _ _ 8 doses dos NOUN NNS Number=Plur _ _ _ _ 9 currently currently ADV RB _ _ _ _ _ 10 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 13 medicine medicine NOUN NN Number=Sing _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 suboptimal suboptimal ADJ JJ Degree=Pos _ _ _ _ 16 in in SCONJ IN _ _ _ _ _ 17 repressing repress VERB VBG VerbForm=Ger _ _ _ _ 18 NFkappaB NFkappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 22 production production NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 26 lesions lesion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 12188 # text = Chronic steroid therapy was able to deplete the T cell products IL-2 and IFN-gamma, whereas the activation of tissue-infiltrating macrophages was only partially affected. 1 Chronic Chronic PROPN NNP Number=Sing _ _ _ _ 2 steroid steroid VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 therapy therapy NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 able able ADJ JJ Degree=Pos _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 deplete deplete VERB VB VerbForm=Inf _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 T T PROPN NNP Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 products product NOUN NNS Number=Plur _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 IFN- IFN- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 whereas whereas SCONJ IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 infiltrating infiltrat VERB VBG VerbForm=Ger _ _ _ _ 26 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 27 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 28 only only ADV RB _ _ _ _ _ 29 partially partially ADV RB _ _ _ _ _ 30 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 12189 # text = IL-1beta transcription was abrogated; in contrast, TGF-beta1 mRNA synthesis was steroid resistant. 1 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 beta beta NOUN NN Number=Sing _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 abrogated abrogate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 7 ; ; PUNCT , _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 TGF TGF NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 beta1 beta1 NUM CD NumType=Card _ _ _ _ 14 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 15 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 steroid steroid VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 resistant resistant NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 12190 # text = The persistence of TGF-beta1-transcribing macrophages, despite paralysis of T cell function, may provide an explanation for the chronicity of the disease, and may identify a novel therapeutic target in this inflammatory vasculopathy. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 persistence persistence NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 beta1 beta1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 transcribing transcribing VERB VBG VerbForm=Ger _ _ _ _ 9 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 despite despite ADP IN _ _ _ _ _ 12 paralysis paralysis NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 may may AUX MD VerbForm=Fin _ _ _ _ 19 provide provide VERB VB VerbForm=Inf _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 explanation explanation NOUN NN Number=Sing _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 chronicity chronicity NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 may may AUX MD VerbForm=Fin _ _ _ _ 31 identify identify VERB VB VerbForm=Inf _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 novel novel NOUN NN Number=Sing _ _ _ _ 34 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 35 target target NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 38 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 39 vasculopathy vasculopathy NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12191 # text = Document 0030012875 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012875 0030012875 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12192 # text = Transcriptional regulation of the vacuolar H(+)-ATPase B2 subunit gene in differentiating THP-1 cells. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 vacuolar vacuolar ADJ JJ Degree=Pos _ _ _ _ 6 H h NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 (+) (+) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 - - PUNCT : _ _ _ _ SpaceAfter=No 9 ATPase ATPase INTJ UH _ _ _ _ _ 10 B2 B2 NUM CD NumType=Card _ _ _ _ 11 subunit subunit NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 in in SCONJ IN _ _ _ _ _ 14 differentiating differentiat VERB VBG VerbForm=Ger _ _ _ _ 15 THP THP NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12193 # text = Monocyte-macrophage differentiation was used as a model system for studying gene regulation of the human vacuolar H(+)-ATPase (V-ATPase). 1 Monocyte Monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 4 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 model model NOUN NN Number=Sing _ _ _ _ 10 system system NOUN NN Number=Sing _ _ _ _ 11 for for SCONJ IN _ _ _ _ _ 12 studying study VERB VBG VerbForm=Ger _ _ _ _ 13 gene gene ADJ JJ Degree=Pos _ _ _ _ 14 regulation regulation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 vacuolar vacuolar ADJ JJ Degree=Pos _ _ _ _ 19 H h NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 (+) (+) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 ATPase ATPase NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 V- v- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ATPase ATPase NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 12194 # text = We examined mRNA levels of various V-ATPase subunits during differentiation of both native monocytes and the cell line THP-1, and found that transcriptional and post-transcriptional mechanisms could account for increases in cell V-ATPase content. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 4 levels level NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 various various ADJ JJ Degree=Pos _ _ _ _ 7 V V NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 ATPase ATPase NOUN NN Number=Sing _ _ _ _ 10 subunits subunit NOUN NNS Number=Plur _ _ _ _ 11 during during ADP IN _ _ _ _ _ 12 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 both both DET DT _ _ _ _ _ 15 native native ADJ JJ Degree=Pos _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 line line NOUN NN Number=Sing _ _ _ _ 21 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 that that SCONJ IN _ _ _ _ _ 28 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 post post X AFX _ _ _ _ SpaceAfter=No 31 -transcriptional -transcriptional ADJ JJ Degree=Pos _ _ _ _ 32 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 33 could could AUX MD VerbForm=Fin _ _ _ _ 34 account account VERB VB VerbForm=Inf _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 increases increase NOUN NNS Number=Plur _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 cell cell PROPN NNP Number=Sing _ _ _ _ 39 V V PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT , _ _ _ _ SpaceAfter=No 41 AT AT ADP IN _ _ _ _ SpaceAfter=No 42 Pase Pase NOUN NN Number=Sing _ _ _ _ 43 content content NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 12195 # text = From nuclear runoff experiments, we found that one subunit in particular, the B2 isoform (Mr = 56,000), was amplified primarily by transcriptional means. 1 From from ADP IN _ _ _ _ _ 2 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 3 runoff runoff NOUN NN Number=Sing _ _ _ _ 4 experiments experiment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 one one NUM CD NumType=Card _ _ _ _ 10 subunit subunit NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 particular particular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 B2 b2 NOUN NN Number=Sing _ _ _ _ 16 isoform isoform NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 Mr mr NOUN NN Number=Sing _ _ _ _ 19 = = SYM SYM _ _ _ _ _ 20 56,000 56,000 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 amplified amplify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 primarily primarily ADV RB _ _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 28 means means NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 12196 # text = We have begun to examine the structure of the B2 subunit promoter region. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 begun begin VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 examine examine VERB VB VerbForm=Inf _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 structure structure NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 B2 b2 NOUN NN Number=Sing _ _ _ _ 11 subunit subunit NOUN NN Number=Sing _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 12197 # text = Isolation and sequencing of the first exon and 5'-flanking region of this gene reveal a TATA-less promoter with a high G + C content. 1 Isolation Isolation NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 sequencing sequencing NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 7 exon exon NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 13 region region NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 reveal reveal VERB VB VerbForm=Inf _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 TATA TATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 less less ADJ JJ Degree=Pos _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 high high ADJ JJ Degree=Pos _ _ _ _ 26 G g NOUN NN Number=Sing _ _ _ _ 27 + + SYM SYM _ _ _ _ _ 28 C c NOUN NN Number=Sing _ _ _ _ 29 content content NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 12198 # text = Primer extension and ribonuclease protection analyses indicate a single major transcriptional start site. 1 Primer Primer NOUN NN Number=Sing _ _ _ _ 2 extension extension NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 ribonuclease ribonuclease NOUN NN Number=Sing _ _ _ _ 5 protection protection NOUN NN Number=Sing _ _ _ _ 6 analyses analysis NOUN NNS Number=Plur _ _ _ _ 7 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 single single ADJ JJ Degree=Pos _ _ _ _ 10 major major ADJ JJ Degree=Pos _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 start start NOUN NN Number=Sing _ _ _ _ 13 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 12199 # text = We transfected promoter-luciferase reporter plasmids into THP-1 cells to define sequences that mediate transcriptional control during monocyte differentiation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 transfected transfect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 promoter promoter ADV RB _ _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 luciferase luciferase ADJ JJ Degree=Pos _ _ _ _ 6 reporter reporter NOUN NN Number=Sing _ _ _ _ 7 plasmids plasmid NOUN NNS Number=Plur _ _ _ _ 8 into into ADP IN _ _ _ _ _ 9 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 define define VERB VB VerbForm=Inf _ _ _ _ 15 sequences sequence NOUN NNS Number=Plur _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 mediate mediate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 19 control control NOUN NN Number=Sing _ _ _ _ 20 during during ADP IN _ _ _ _ _ 21 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 22 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 12200 # text = We found that sequences downstream from the transcriptional start site were sufficient to confer increased expression during THP-1 differentiation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 sequences sequence NOUN NNS Number=Plur _ _ _ _ 5 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 start start NOUN NN Number=Sing _ _ _ _ 10 site site NOUN NN Number=Sing _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 confer confer VERB VB VerbForm=Inf _ _ _ _ 15 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 during during ADP IN _ _ _ _ _ 18 THP THP NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 12201 # text = DNase I footprinting and sequence analysis revealed the existence of multiple AP2 and Sp1 binding sites in the 5'-untranslated and proximal coding regions. 1 DNase DNase INTJ UH _ _ _ _ _ 2 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 3 footprinting footprint VERB VBG VerbForm=Ger _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 sequence sequence NOUN NN Number=Sing _ _ _ _ 6 analysis analysis NOUN NN Number=Sing _ _ _ _ 7 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 existence existence NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 12 AP2 Ap2 NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 15 binding bind VERB VBG VerbForm=Ger _ _ _ _ 16 sites site NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 '- '- PUNCT . _ _ _ _ SpaceAfter=No 21 untranslated untranslated ADJ JJ Degree=Pos _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 24 coding coding NOUN NN Number=Sing _ _ _ _ 25 regions region NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12202 # text = Document 0030012882 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012882 0030012882 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12203 # text = Regulation of fas-ligand expression during activation-induced cell death in T lymphocytes via nuclear factor kappaB. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 fas fas NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 - - PUNCT : _ _ _ _ SpaceAfter=No 5 ligand ligand NOUN NN Number=Sing _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 during during ADP IN _ _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 death death NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 T T PROPN NNP Number=Sing _ _ _ _ 15 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 16 via via ADP IN _ _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 kappaB kappaB NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12204 # text = T cell receptor engagement activates transcription factors important for cytokine gene regulation. 1 T t PROPN NNP Number=Sing _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 receptor receptor NOUN NN Number=Sing _ _ _ _ 4 engagement engagement NOUN NN Number=Sing _ _ _ _ 5 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factors factor NOUN NNS Number=Plur _ _ _ _ 8 important important ADJ JJ Degree=Pos _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 12205 # text = Additionally, this signaling pathway also leads to activation-induced apoptosis in T lymphocytes that is dependent on FasL transcription and expression. 1 Additionally additionally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 signaling signaling NOUN NN Number=Sing _ _ _ _ 5 pathway pathway NOUN NN Number=Sing _ _ _ _ 6 also also ADV RB _ _ _ _ _ 7 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 FasL Fasl ADJ JJ Degree=Pos _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 12206 # text = Here we demonstrate that nuclear factor kappaB (NF-kappaB), which is involved in the transcriptional regulation of many cytokine genes expressed in activated lymphocytes, also plays a role in T cell activation-induced FasL expression. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 involved involved ADJ JJ Degree=Pos _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 20 regulation regulation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 many many ADJ JJ Degree=Pos _ _ _ _ 23 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 24 genes gene NOUN NNS Number=Plur _ _ _ _ 25 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 also also ADV RB _ _ _ _ _ 31 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 role role NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 T t PROPN NNP Number=Sing _ _ _ _ 36 cell cell PROPN NNP Number=Sing _ _ _ _ 37 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 FasL Fasl ADJ JJ Degree=Pos _ _ _ _ 41 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 12207 # text = Inhibition of NF-kappaB activity in a T cell hybridoma leads to decreased FasL expression and apoptosis upon T cell receptor stimulation. 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 hybridoma hybridoma NOUN NN Number=Sing _ _ _ _ 12 leads lead VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 decreased decrease VERB VB VerbForm=Inf _ _ _ _ 15 FasL Fasl ADJ JJ Degree=Pos _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 19 upon upon ADP IN _ _ _ _ _ 20 T t PROPN NNP Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 receptor receptor NOUN NN Number=Sing _ _ _ _ 23 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 12208 # text = We identified the NF-kappaB site in the FasL promoter that contributes to such regulation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 7 site site NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 FasL Fasl ADJ JJ Degree=Pos _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 contributes contribute VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 such such ADJ JJ Degree=Pos _ _ _ _ 16 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 12209 # text = Co-expression of p65 (Rel A) with the FasL promoter enhanced its activity, and co-expression of IkappaB dramatically inhibited the inducible promoter activity. 1 Co co PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -expression -expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p65 p65 NUM CD NumType=Card _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 Rel Rel NOUN NN Number=Sing _ _ _ _ 7 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 FasL Fasl ADJ JJ Degree=Pos _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 co-expression co-expression NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 IkappaB IkappaB PROPN NNP Number=Sing _ _ _ _ 21 dramatically dramatically ADV RB _ _ _ _ _ 22 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ _ 26 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 12210 # text = In contrast, the transcription factor AP-1 is not required for activation-induced FasL promoter activity. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT , _ _ _ _ SpaceAfter=No 9 1 1 NUM CD NumType=Card _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 not not PART RB _ _ _ _ _ 12 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 FasL Fasl ADJ JJ Degree=Pos _ _ _ _ 18 promoter promoter NOUN NN Number=Sing _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 12211 # text = These results define a role for NF-kappaB in mediating FasL expression during T cell activation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 define define VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 10 in in SCONJ IN _ _ _ _ _ 11 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 12 FasL Fasl ADJ JJ Degree=Pos _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 during during ADP IN _ _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12212 # text = Document 0030012887 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012887 0030012887 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12213 # text = Expression of c-jun, jun B and jun D proto-oncogenes in human peripheral-blood granulocytes. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 c- c- SYM NFP _ _ _ _ SpaceAfter=No 4 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 jun jun NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 jun jun NOUN NN Number=Sing _ _ _ _ 10 D would NOUN NN Number=Sing _ _ _ _ 11 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 -oncogenes -oncogene NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 peripheral peripheral ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 blood blood NOUN NN Number=Sing _ _ _ _ 18 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12214 # text = We have found that purified human peripheral-blood granulocytes express constitutively significant levels of proto-oncogenes c-jun, jun B and jun D mRNA. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 peripheral peripheral NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 blood blood NOUN NN Number=Sing _ _ _ _ 10 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ _ 11 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 constitutively constitutively ADV RB _ _ _ _ _ 13 significant significant ADJ JJ Degree=Pos _ _ _ _ 14 levels level NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 oncogenes oncogene NOUN NNS Number=Plur _ _ _ _ 19 c- c- PUNCT : _ _ _ _ SpaceAfter=No 20 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 jun jun NOUN NN Number=Sing _ _ _ _ 23 B b NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 jun jun VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 D D PROPN NNP Number=Sing _ _ _ _ 27 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 12215 # text = Upon functional activation of granulocytes by 4 beta-phorbol 12-myristate 13-acetate (PMA), the levels of c-jun, jun B and jun D transcripts were increased. 1 Upon upon ADP IN _ _ _ _ _ 2 functional functional ADJ JJ Degree=Pos _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 4 4 NUM CD NumType=Card _ _ _ _ 8 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 11 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT : _ _ _ _ SpaceAfter=No 13 myristate myristate NOUN NN Number=Sing _ _ _ _ 14 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT : _ _ _ _ SpaceAfter=No 16 acetate acetate NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 levels level NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 c- c- SYM NFP _ _ _ _ SpaceAfter=No 25 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 jun jun NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 jun jun NOUN NN Number=Sing _ _ _ _ 31 D d NOUN NN Number=Sing _ _ _ _ 32 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 33 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 12216 # text = The three jun genes showed a similar time course in their induction by PMA, maximal mRNA levels being reached after 60 min of induction. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 three three NUM CD NumType=Card _ _ _ _ 3 jun jun NOUN NN Number=Sing _ _ _ _ 4 genes gene NOUN NNS Number=Plur _ _ _ _ 5 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 similar similar ADJ JJ Degree=Pos _ _ _ _ 8 time time NOUN NN Number=Sing _ _ _ _ 9 course course NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 17 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 18 levels level NOUN NNS Number=Plur _ _ _ _ 19 being be AUX VBG VerbForm=Ger _ _ _ _ 20 reached reach VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 after after ADP IN _ _ _ _ _ 22 60 60 NUM CD NumType=Card _ _ _ _ 23 min min NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 12217 # text = These results suggest that expression of c-jun, jun B and jun D genes might be involved in terminal granulocyte differentiation or in regulating granulocyte functionality. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 c- c- SYM NFP _ _ _ _ SpaceAfter=No 8 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 jun jun NOUN NN Number=Sing _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 jun jun NOUN NN Number=Sing _ _ _ _ 14 D d NOUN NN Number=Sing _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ _ 16 might might AUX MD VerbForm=Fin _ _ _ _ 17 be be AUX VB VerbForm=Inf _ _ _ _ 18 involved involved ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 21 granulocyte granulocyte NOUN NN Number=Sing _ _ _ _ 22 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 in in SCONJ IN _ _ _ _ _ 25 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 26 granulocyte granulocyte ADJ JJ Degree=Pos _ _ _ _ 27 functionality functionality NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12218 # text = Document 0030012888 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012888 0030012888 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12219 # text = Oxidants, transcription factors, and intestinal inflammation. 1 Oxidants Oxidant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 intestinal intestinal ADJ JJ Degree=Pos _ _ _ _ 8 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12220 # text = It is now well appreciated that chronic gut inflammation is characterized by enhanced production of reactive metabolites of oxygen and nitrogen. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 now now ADV RB _ _ _ _ _ 4 well well ADV RB Degree=Pos _ _ _ _ 5 appreciated appreciate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 8 gut gut NOUN NN Number=Sing _ _ _ _ 9 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 characterized characterize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 production production NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 17 metabolites metabolite NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 nitrogen nitrogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 12221 # text = Some of these oxidants are known to modulate the expression of a variety of genes that are involved in the immune and inflammatory responses. 1 Some some DET DT _ _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 oxidants oxidant NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 variety variety NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 involved involved ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 immune immune ADJ JJ Degree=Pos _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 24 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 12222 # text = For example, certain oxidants are known to activate the nuclear transcription factor kappa B, which regulates the expression of a variety of different adhesion molecules, cytokines, and enzymes. 1 For for ADP IN _ _ _ _ _ 2 example example NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 certain certain ADJ JJ Degree=Pos _ _ _ _ 5 oxidants oxidant NOUN NNS Number=Plur _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 activate activate VERB VB VerbForm=Inf _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 variety variety NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 different different ADJ JJ Degree=Pos _ _ _ _ 26 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 27 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 enzymes enzyme NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 12223 # text = Oxidants are also known to activate another transcription factor, activator protein-1. 1 Oxidants Oxidant NOUN NNS Number=Plur _ _ _ _ 2 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 activate activate VERB VB VerbForm=Inf _ _ _ _ 7 another another DET DT _ _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 activator activator NOUN NN Number=Sing _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 12224 # text = This transcription factor is composed of products from the fos and jun proto-oncogene family and is believed to be important in regulating cell growth and proliferation. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 products product NOUN NNS Number=Plur _ _ _ _ 8 from from ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 fos fo NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 jun jun VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 proto proto PART TO _ _ _ _ SpaceAfter=No 14 -oncogene -oncogene VERB VB VerbForm=Inf _ _ _ _ 15 family family NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 believed believe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 be be AUX VB VerbForm=Inf _ _ _ _ 21 important important ADJ JJ Degree=Pos _ _ _ _ 22 in in SCONJ IN _ _ _ _ _ 23 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 growth growth NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 12225 # text = Finally, oxidants are believed to promote intestinal epithelial cell apoptosis, and the B-cell lymphoma/leukemia-2 gene product is believed to inhibit this phenomenon in an antioxidant-dependent manner. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 oxidants oxidant NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 believed believe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 promote promote VERB VB VerbForm=Inf _ _ _ _ 8 intestinal intestinal ADJ JJ Degree=Pos _ _ _ _ 9 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 lymphoma/leukemia lymphoma/leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ _ 22 product product NOUN NN Number=Sing _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 believed believe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 phenomenon phenomenon NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 antioxidant antioxidant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 34 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 12226 # text = Taken together, these observations suggest that nontoxic concentrations of reactive metabolites of oxygen and nitrogen play an important role in regulating the expression of genes involved in the inflammatory response and in modulating apoptosis. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 observations observation NOUN NNS Number=Plur _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 nontoxic nontoxic ADJ JJ Degree=Pos _ _ _ _ 9 concentrations concentration NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 12 metabolites metabolite NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 nitrogen nitrogen NOUN NN Number=Sing _ _ _ _ 17 play play VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 important important ADJ JJ Degree=Pos _ _ _ _ 20 role role NOUN NN Number=Sing _ _ _ _ 21 in in SCONJ IN _ _ _ _ _ 22 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 genes gene NOUN NNS Number=Plur _ _ _ _ 27 involved involved ADJ JJ Degree=Pos _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 31 response response NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 in in SCONJ IN _ _ _ _ _ 34 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 35 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12227 # text = Document 0030012895 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012895 0030012895 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12228 # text = Human tumor necrosis factor alpha gene regulation in phorbol ester stimulated T and B cell lines. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 tumor tumor NOUN NN Number=Sing _ _ _ _ 3 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 alpha alpha ADP IN _ _ _ _ _ 6 gene gene ADJ JJ Degree=Pos _ _ _ _ 7 regulation regulation NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 10 ester ester NOUN NN Number=Sing _ _ _ _ 11 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 B b ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12229 # text = The minimal region of the human tumor necrosis factor alpha (TNF-alpha) gene promoter necessary for its transcriptional induction by phorbol esters (PMA) in human 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 minimal minimal ADJ JJ Degree=Pos _ _ _ _ 3 region region NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 tumor tumor NOUN NN Number=Sing _ _ _ _ 8 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 22 induction induction NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 25 esters ester NOUN NNS Number=Plur _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ # sent_id = 12230 # text = T and B lymphocyte cell lines has been localized between -52 and +89 nucleotides (nt) relative to the gene's transcriptional start site. 1 T T PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 B benefit ADJ JJ Degree=Pos _ _ _ _ 4 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 lines line NOUN NNS Number=Plur _ _ _ _ 7 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 9 localized localize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 between between ADP IN _ _ _ _ _ 11 - - SYM SYM _ _ _ _ SpaceAfter=No 12 52 52 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 + + SYM SYM _ _ _ _ SpaceAfter=No 15 89 89 NUM CD NumType=Card _ _ _ _ 16 nucleotides nucleotide NOUN NNS Number=Plur _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 nt not PART RB _ _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 relative relative ADV RB _ _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 's 's PART POS _ _ _ _ _ 25 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 26 start start NOUN NN Number=Sing _ _ _ _ 27 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 12231 # text = Comparison of these sequences to those required to mediate virus or lipopolysaccharide (LPS) induction of the gene reveal significant differences, and thus, the sequence requirements for PMA induction are distinct from those that mediate induction by virus or LPS. 1 Comparison Comparison NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 sequences sequence NOUN NNS Number=Plur _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 7 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 10 virus virus NOUN NN Number=Sing _ _ _ _ 11 or or CCONJ CC _ _ _ _ _ 12 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 LPS LPS INTJ UH _ _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 induction induction NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 gene gene NOUN NN Number=Sing _ _ _ _ 20 reveal reveal ADJ JJ Degree=Pos _ _ _ _ 21 significant significant ADJ JJ Degree=Pos _ _ _ _ 22 differences difference NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 thus thus ADV RB _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 sequence sequence NOUN NN Number=Sing _ _ _ _ 29 requirements requirement NOUN NNS Number=Plur _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 PMA PMA PROPN NNP Number=Sing _ _ _ _ 32 induction induction NOUN NN Number=Sing _ _ _ _ 33 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 35 from from ADP IN _ _ _ _ _ 36 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 37 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 38 mediate mediate ADJ JJ Degree=Pos _ _ _ _ 39 induction induction NOUN NN Number=Sing _ _ _ _ 40 by by ADP IN _ _ _ _ _ 41 virus virus NOUN NN Number=Sing _ _ _ _ 42 or or CCONJ CC _ _ _ _ _ 43 LPS Lp NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 12232 # text = Although three sites in the TNF-alpha promoter (kappa 1, kappa 2, and kappa 3) specifically bind the transcription factor NF-kappa B in lymphoid nuclear extracts, TNF-alpha mRNA induction by PMA does not correlate with NF-kappa B binding activities displayed by different T and B cell lines. 1 Although although SCONJ IN _ _ _ _ _ 2 three three NUM CD NumType=Card _ _ _ _ 3 sites site NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 alpha alpha NOUN NN Number=Sing _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 3 3 X LS _ _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 specifically specifically ADV RB _ _ _ _ _ 22 bind bind VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ _ 26 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 32 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 33 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 alpha alpha NOUN NN Number=Sing _ _ _ _ 38 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 39 induction induction NOUN NN Number=Sing _ _ _ _ 40 by by ADP IN _ _ _ _ _ 41 PMA PMA PROPN NNP Number=Sing _ _ _ _ 42 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 43 not not PART RB _ _ _ _ _ 44 correlate correlate VERB VB VerbForm=Inf _ _ _ _ 45 with with ADP IN _ _ _ _ _ 46 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 kappa kappa NOUN NN Number=Sing _ _ _ _ 49 B b NOUN NN Number=Sing _ _ _ _ 50 binding bind VERB VBG VerbForm=Ger _ _ _ _ 51 activities activity NOUN NNS Number=Plur _ _ _ _ 52 displayed display VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 53 by by ADP IN _ _ _ _ _ 54 different different ADJ JJ Degree=Pos _ _ _ _ 55 T T PROPN NNP Number=Sing _ _ _ _ 56 and and CCONJ CC _ _ _ _ _ 57 B b ADJ JJ Degree=Pos _ _ _ _ 58 cell cell NOUN NN Number=Sing _ _ _ _ 59 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 12233 # text = Moreover, kappa 1-kappa 3 can each be deleted from the TNF-alpha promoter with little effect on the gene's inducibility by PMA. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT : _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 3 3 NUM CD NumType=Card _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 each each DET DT _ _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 deleted delete VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 alpha alpha NOUN NN Number=Sing _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 little little ADJ JJ Degree=Pos _ _ _ _ 20 effect effect NOUN NN Number=Sing _ _ _ _ 21 on on ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 's 's PART POS _ _ _ _ _ 25 inducibility inducibility NOUN NN Number=Sing _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 12234 # text = Therefore, TNF-alpha mRNA induction by PMA, like its induction by virus and LPS, is not primarily mediated by NF-kappa B, but rather is mediated through other sequences and protein factors. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 alpha alpha X FW Foreign=Yes _ _ _ _ 6 mRNA mRNA X GW _ _ _ _ _ 7 induction induction NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 like like ADP IN _ _ _ _ _ 12 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 induction induction NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 virus virus NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 primarily primarily ADV RB _ _ _ _ _ 22 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappa kappa PROPN NNP Number=Sing _ _ _ _ 27 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 but but CCONJ CC _ _ _ _ _ 30 rather rather ADV RB _ _ _ _ _ 31 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 32 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 33 through through ADP IN _ _ _ _ _ 34 other other ADJ JJ Degree=Pos _ _ _ _ 35 sequences sequence NOUN NNS Number=Plur _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 protein protein NOUN NN Number=Sing _ _ _ _ 38 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 12235 # text = Surprisingly, multimers of kappa 1-kappa 3 can confer PMA inducibility on a heterologous promoter in a B (Raji), but not a T (HUT78) cell line. 1 Surprisingly surprisingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 multimers multimer NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT : _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 3 3 NUM CD NumType=Card _ _ _ _ 10 can can AUX MD VerbForm=Fin _ _ _ _ 11 confer confer VERB VB VerbForm=Inf _ _ _ _ 12 PMA PMA PROPN NNP Number=Sing _ _ _ _ 13 inducibility inducibility NOUN NN Number=Sing _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 Raji Raji PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 but but CCONJ CC _ _ _ _ _ 26 not not ADV RB _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 T T NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 HUT78 HUT78 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 12236 # text = However they are not functional on a truncated TNF-alpha promoter, indicating that promoter context and cell type specificity influence the PMA inducible function of these NF-kappa B binding sites. 1 However however ADV RB _ _ _ _ _ 2 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 functional functional ADJ JJ Degree=Pos _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 truncated truncate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 context context NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 type type NOUN NN Number=Sing _ _ _ _ 21 specificity specificity NOUN NN Number=Sing _ _ _ _ 22 influence influence NOUN NN Number=Sing _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 PMA PMA PROPN NNP Number=Sing _ _ _ _ 25 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 26 function function NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 29 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappa kappa NOUN NN Number=Sing _ _ _ _ 32 B b NOUN NN Number=Sing _ _ _ _ 33 binding bind VERB VBG VerbForm=Ger _ _ _ _ 34 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12237 # text = Document 0030012906 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012906 0030012906 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12238 # text = Differential expression and phosphorylation of CTCF, a c-myc transcriptional regulator, during differentiation of human myeloid cells. 1 Differential differential ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 CTCF CTCF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 c- c- SYM NFP _ _ _ _ SpaceAfter=No 10 myc myc ADJ JJ Degree=Pos _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 regulator regulator NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 during during ADP IN _ _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12239 # text = CTCF is a transcriptional repressor of the c-myc gene. 1 CTCF CTCF PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 repressor repressor NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 c- c- SYM NFP _ _ _ _ SpaceAfter=No 9 myc myc ADJ JJ Degree=Pos _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 12240 # text = Although CTCF has been characterized in some detail, there is very little information about the regulation of CTCF activity. 1 Although although SCONJ IN _ _ _ _ _ 2 CTCF CTCF PROPN NNP Number=Sing _ _ _ _ 3 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 characterized characterize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 some some DET DT _ _ _ _ _ 8 detail detail NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 there there PRON EX _ _ _ _ _ 11 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 very very ADV RB _ _ _ _ _ 13 little little ADJ JJ Degree=Pos _ _ _ _ 14 information information NOUN NN Number=Sing _ _ _ _ 15 about about ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 regulation regulation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 CTCF CTCF ADJ JJ Degree=Pos _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 12241 # text = Therefore we investigated CTCF expression and phosphorylation during induced differentiation of human myeloid leukemia cells. 1 Therefore therefore ADV RB _ _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 CTCF CTCF PROPN NNP Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 8 during during ADP IN _ _ _ _ _ 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 14 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 12242 # text = We found that: (i) both CTCF mRNA and protein are down-regulated during terminal differentiation in most cell lines tested; (ii) CTCF down-regulation is retarded and less pronounced than that of c-myc; (iii) CTCF protein is differentially phosphorylated and the phosphorylation profiles depend on the differentiation pathway. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ SpaceAfter=No 4 : : PUNCT : _ _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 i i X LS _ _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 both both CCONJ CC _ _ _ _ _ 9 CTCF CTCF PROPN NNP Number=Sing _ _ _ _ 10 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 protein protein VERB VB VerbForm=Inf _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 down down ADV RB _ _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 during during ADP IN _ _ _ _ _ 18 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 19 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 most most ADJ JJS Degree=Sup _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 lines line NOUN NNS Number=Plur _ _ _ _ 24 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 25 ; ; PUNCT , _ _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 ii ii X LS _ _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 CTCF CTCF ADP IN _ _ _ _ _ 30 down down ADV RB _ _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 regulation regulation NOUN NN Number=Sing _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 retarded retarded ADJ JJ Degree=Pos _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 less less ADV RBR Degree=Cmp _ _ _ _ 37 pronounced pronounce ADJ JJ Degree=Pos _ _ _ _ 38 than than ADP IN _ _ _ _ _ 39 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 c-myc c-myc NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 ; ; PUNCT , _ _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 iii iii X LS _ _ _ _ SpaceAfter=No 45 ) ) PUNCT -RRB- _ _ _ _ _ 46 CTCF Ctcf NOUN NN Number=Sing _ _ _ _ 47 protein protein NOUN NN Number=Sing _ _ _ _ 48 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 49 differentially differentially ADV RB _ _ _ _ _ 50 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 the the DET DT Definite=Def|PronType=Art _ _ _ _ 53 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 54 profiles profile NOUN NNS Number=Plur _ _ _ _ 55 depend depend VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 56 on on ADP IN _ _ _ _ _ 57 the the DET DT Definite=Def|PronType=Art _ _ _ _ 58 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 59 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 12243 # text = We concluded that CTCF expression and activity is controlled at transcriptional and post-transcriptional levels. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 concluded conclude VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 CTCF CTCF PROPN NNP Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 at at ADP IN _ _ _ _ _ 11 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 post-transcriptional post-transcriptional ADJ JJ Degree=Pos _ _ _ _ 14 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12244 # text = Document 0030012912 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012912 0030012912 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12245 # text = C/EBPbeta and GATA-1 synergistically regulate activity of the eosinophil granule major basic protein promoter: implication for C/EBPbeta activity in eosinophil gene expression. 1 C/EBPbeta C/EBPbeta PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 synergistically synergistically ADV RB _ _ _ _ _ 7 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 eosinophil eosinophil NOUN NN Number=Sing _ _ _ _ 12 granule granule NOUN NN Number=Sing _ _ _ _ 13 major major ADJ JJ Degree=Pos _ _ _ _ 14 basic basic ADJ JJ Degree=Pos _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 : : PUNCT : _ _ _ _ _ 18 implication implication NOUN NN Number=Sing _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 C/EBPbeta C/EBPbeta PROPN NNP Number=Sing _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 eosinophil eosinophil ADJ JJ Degree=Pos _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12246 # text = Eosinophil granule major basic protein (MBP) is expressed exclusively in eosinophils and basophils in hematopoietic cells. 1 Eosinophil Eosinophil PROPN NNP Number=Sing _ _ _ _ 2 granule granule NOUN NN Number=Sing _ _ _ _ 3 major major ADJ JJ Degree=Pos _ _ _ _ 4 basic basic ADJ JJ Degree=Pos _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 MBP MBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 exclusively exclusively ADV RB _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 basophils basophil NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 12247 # text = In our previous study, we demonstrated a major positive regulatory role for GATA-1 and a negative regulatory role for GATA-2 in MBP gene transcription. 1 In in ADP IN _ _ _ _ _ 2 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 3 previous previous ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 major major ADJ JJ Degree=Pos _ _ _ _ 10 positive positive ADJ JJ Degree=Pos _ _ _ _ 11 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 12 role role NOUN NN Number=Sing _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 negative negative ADJ JJ Degree=Pos _ _ _ _ 20 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 21 role role NOUN NN Number=Sing _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 2 2 NUM CD NumType=Card _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 MBP MBP ADJ JJ Degree=Pos _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 12248 # text = Further analysis of the MBP promoter region identified a C/EBP (CCAAT/enhancer-binding protein) consensus binding site 6 bp upstream of the functional GATA-binding site in the MBP gene. 1 Further further ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 MBP MBP PROPN NNP Number=Sing _ _ _ _ 6 promoter promoter NOUN NN Number=Sing _ _ _ _ 7 region region NOUN NN Number=Sing _ _ _ _ 8 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 C/ c/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 EBP EBP NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 CCAAT Ccaat NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 15 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 consensus consensus NOUN NN Number=Sing _ _ _ _ 21 binding bind VERB VBG VerbForm=Ger _ _ _ _ 22 site site NOUN NN Number=Sing _ _ _ _ 23 6 6 NUM CD NumType=Card _ _ _ _ 24 bp bp NOUN NN Number=Sing _ _ _ _ 25 upstream upstream NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 functional functional ADJ JJ Degree=Pos _ _ _ _ 29 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 binding binding VERB VBG VerbForm=Ger _ _ _ _ 32 site site NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 MBP MBP PROPN NNP Number=Sing _ _ _ _ 36 gene gene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 12249 # text = In the cell line HT93A, which is capable of differentiating towards both the eosinophil and neutrophil lineages in response to retinoic acid (RA), C/EBPalpha mRNA expression decreased significantly concomitant with eosinophilic and neutrophilic differentiation, whereas C/EBPbeta expression was markedly increased. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 line line NOUN NN Number=Sing _ _ _ _ 5 HT93A HT93a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 capable capable ADJ JJ Degree=Pos _ _ _ _ 10 of of SCONJ IN _ _ _ _ _ 11 differentiating differentiat VERB VBG VerbForm=Ger _ _ _ _ 12 towards toward ADP IN _ _ _ _ _ 13 both both CCONJ CC _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 eosinophil eosinophil NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 18 lineages lineage NOUN NNS Number=Plur _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 response response NOUN NN Number=Sing _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 23 acid acid NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 C/ Cith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 29 EBPalpha EBPalpha PROPN NNP Number=Sing _ _ _ _ 30 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 31 expression expression NOUN NN Number=Sing _ _ _ _ 32 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 significantly significantly ADV RB _ _ _ _ _ 34 concomitant concomitant ADJ JJ Degree=Pos _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 eosinophilic eosinophilic ADJ JJ Degree=Pos _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 neutrophilic neutrophilic ADJ JJ Degree=Pos _ _ _ _ 39 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 whereas whereas SCONJ IN _ _ _ _ _ 42 C/EBPbeta C/EBPbeta PROPN NNP Number=Sing _ _ _ _ 43 expression expression NOUN NN Number=Sing _ _ _ _ 44 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 45 markedly markedly ADV RB _ _ _ _ _ 46 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 12250 # text = Electrophoretic mobility shift assays (EMSAs) showed that recombinant C/EBPbeta protein could bind to the potential C/EBP-binding site (bp -90 to -82) in the MBP promoter. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assays assay NOUN NNS Number=Plur _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 EMSAs EMSAs PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 10 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 11 C/EBPbeta C/EBPbeta NOUN NN Number=Sing _ _ _ _ 12 protein protein NOUN NN Number=Sing _ _ _ _ 13 could could AUX MD VerbForm=Fin _ _ _ _ 14 bind bind VERB VB VerbForm=Inf _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 potential potential NOUN NN Number=Sing _ _ _ _ 18 C/EBP- C/EBP- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 binding bind VERB VBG VerbForm=Ger _ _ _ _ 20 site site NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 bp bp NOUN NN Number=Sing _ _ _ _ 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 90 90 NUM CD NumType=Card _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 - - SYM SYM _ _ _ _ SpaceAfter=No 27 82 82 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 MBP MBP PROPN NNP Number=Sing _ _ _ _ 32 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 12251 # text = Furthermore, we have demonstrated that both C/EBPbeta and GATA-1 can bind simultaneously to the C/EBP- and GATA-binding sites in the MBP promoter. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 both both CCONJ CC _ _ _ _ _ 8 C/EBPbeta C/EBPbeta PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 can can AUX MD VerbForm=Fin _ _ _ _ 14 bind bind VERB VB VerbForm=Inf _ _ _ _ 15 simultaneously simultaneously ADV RB _ _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 C/ c/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 EBP EBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 binding binding VERB VBG VerbForm=Ger _ _ _ _ 25 sites site NOUN NNS Number=Plur _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 MBP Mbp PROPN NNP Number=Sing _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 12252 # text = To determine the functionality of both the C/EBP- and GATA- binding sites, we analyzed whether C/EBPbeta and GATA-1 can stimulate the MBP promoter in the C/EBPbeta and GATA-1 negative Jurkat T-cell line. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 functionality functionality NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 both both CCONJ CC _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 C/ c/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 EBP Ebp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ _ 14 binding binding VERB VBG VerbForm=Ger _ _ _ _ 15 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 18 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 whether whether SCONJ IN _ _ _ _ _ 20 C/EBPbeta C/EBPbeta PROPN NNP Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ _ 25 can can AUX MD VerbForm=Fin _ _ _ _ 26 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 MBP Mbp NOUN NN Number=Sing _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 C/EBPbeta C/EBPbeta PROPN NNP Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ _ 37 negative negative NOUN NN Number=Sing _ _ _ _ 38 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 39 T- T- SYM NFP _ _ _ _ SpaceAfter=No 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 12253 # text = Cotransfection with C/EBPbeta and GATA-1 expression vectors produced a 5-fold increase compared with cotransfection with the C/EBPbeta or GATA-1 expression vectors individually. 1 Cotransfection Cotransfection NOUN NN Number=Sing _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 C/EBPbeta C/EBPbeta PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 vectors vector NOUN NNS Number=Plur _ _ _ _ 10 produced produce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 fold fold NOUN NN Number=Sing _ _ _ _ 15 increase increase NOUN NN Number=Sing _ _ _ _ 16 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 cotransfection cotransfection NOUN NN Number=Sing _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 C/EBPbeta C/EBPbeta PROPN NNP Number=Sing _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 vectors vector NOUN NNS Number=Plur _ _ _ _ 28 individually individually ADV RB _ _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 12254 # text = In addition, GST pull-down experiments demonstrated a physical interaction between human GATA-1 and C/EBPbeta. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 GST gst AUX MD VerbForm=Fin _ _ _ _ 5 pull pull VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 down down ADP RP _ _ _ _ _ 8 experiments experiment NOUN NNS Number=Plur _ _ _ _ 9 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 physical physical ADJ JJ Degree=Pos _ _ _ _ 12 interaction interaction NOUN NN Number=Sing _ _ _ _ 13 between between ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 GATA GATA NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 C/EBPbeta C/EBPbeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 12255 # text = Expression of FOG (riend ATA), which binds to GATA-1 and acts as a cofactor for GATA-binding proteins, decreased transactivation activity of GATA-1 for the MBP promoter in a dose-dependent manner. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 FOG FOG PROPN NNP Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 riend riend PROPN NNP Number=Sing _ _ _ _ 6 ATA ATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 which which PRON WDT PronType=Rel _ _ _ _ 10 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 acts act VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 cofactor cofactor NOUN NN Number=Sing _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 binding binding VERB VBG VerbForm=Ger _ _ _ _ 24 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 28 activity activity NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 1 1 NUM CD NumType=Card _ _ _ _ 33 for for ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 MBP Mbp PROPN NNP Number=Sing _ _ _ _ 36 promoter promoter NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 42 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 12256 # text = Our results provide the first evidence that both GATA-1 and C/EBPbeta synergistically transactivate the promoter of an eosinophil-specific granule protein gene and that FOG may act as a negative cofactor for the eosinophil lineage, unlike its positively regulatory function for the erythroid and megakaryocyte lineages. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 6 evidence evidence NOUN NN Number=Sing _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 both both DET DT _ _ _ _ _ 9 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 C/EBPbeta C/EBPbeta PROPN NNP Number=Sing _ _ _ _ 14 synergistically synergistically ADV RB _ _ _ _ _ 15 transactivate transactivate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 promoter promoter NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 eosinophil eosinophil NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 specific specific ADJ JJ Degree=Pos _ _ _ _ 23 granule granule NOUN NN Number=Sing _ _ _ _ 24 protein protein NOUN NN Number=Sing _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 that that SCONJ IN _ _ _ _ _ 28 FOG FOG PRON NN Number=Sing _ _ _ _ 29 may may AUX MD VerbForm=Fin _ _ _ _ 30 act act VERB VB VerbForm=Inf _ _ _ _ 31 as as ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 negative negative ADJ JJ Degree=Pos _ _ _ _ 34 cofactor cofactor NOUN NN Number=Sing _ _ _ _ 35 for for ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 eosinophil eosinophil NOUN NN Number=Sing _ _ _ _ 38 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 unlike unlike ADP IN _ _ _ _ _ 41 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 42 positively positively ADV RB _ _ _ _ _ 43 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 44 function function NOUN NN Number=Sing _ _ _ _ 45 for for ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 erythroid erythroid NOUN NN Number=Sing _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 megakaryocyte megakaryocyte NOUN NN Number=Sing _ _ _ _ 50 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12257 # text = Document 0030012918 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012918 0030012918 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12258 # text = HIV-1 1 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ # sent_id = 12259 # text = Nef leads to inhibition or activation of T cells depending on its intracellular localization. 1 Nef Nef ADJ JJ Degree=Pos _ _ _ _ 2 leads lead NOUN NNS Number=Plur _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 5 or or CCONJ CC _ _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 depending depend VERB VBG VerbForm=Ger _ _ _ _ 11 on on ADP IN _ _ _ _ _ 12 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 14 localization localization NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12260 # text = Nef of primate lentiviruses is required for viremia and progression to AIDS in monkeys. 1 Nef Nef ADP IN _ _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 primate primate ADJ JJ Degree=Pos _ _ _ _ 4 lentiviruses lentiviruse NOUN NNS Number=Plur _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 viremia viremia NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 progression progression NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 AIDS aids NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 monkeys monkey NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 12261 # text = Negative, positive, and no effects of Nef have also been reported on viral replication in cells. 1 Negative negative ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 positive positive ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 no no DET DT _ _ _ _ _ 7 effects effect NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 Nef Nef PROPN NNP Number=Sing _ _ _ _ 10 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 also also ADV RB _ _ _ _ _ 12 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 13 reported report VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 on on ADP IN _ _ _ _ _ 15 viral viral ADJ JJ Degree=Pos _ _ _ _ 16 replication replication NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 12262 # text = To reconcile these observations, we expressed a hybrid CD8-Nef protein in Jurkat cells. 1 To to PART TO _ _ _ _ _ 2 reconcile reconcile VERB VB VerbForm=Inf _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 observations observation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 expressed express VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 hybrid hybrid NOUN NN Number=Sing _ _ _ _ 10 CD8 CD8 NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 Nef Nef NOUN NN Number=Sing _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 12263 # text = Two opposite phenotypes were found, which depended on the intracellular localization of Nef. 1 Two two NUM CD NumType=Card _ _ _ _ 2 opposite opposite ADJ JJ Degree=Pos _ _ _ _ 3 phenotypes phenotype NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 depended depend VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 12 localization localization NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 Nef Nef PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 12264 # text = Expressed in the cytoplasm or on the cell surface, the chimera inhibited or activated early signaling events from the T cell antigen receptor. 1 Expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 5 or or CCONJ CC _ _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 surface surface NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 chimera chimera NOUN NN Number=Sing _ _ _ _ 13 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 early early ADV RB Degree=Pos _ _ _ _ 17 signaling signaling VERB VBG VerbForm=Ger _ _ _ _ 18 events event NOUN NNS Number=Plur _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 T T PROPN NNP Number=Sing _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 antigen antigen NUM CD NumType=Card _ _ _ _ 24 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 12265 # text = Activated Jurkat cells died by apoptosis, and only cells with mutated nef genes expressing truncated Nefs survived, which rendered Nef nonfunctional. 1 Activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 died die VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 only only ADV RB _ _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 nef nef NOUN NN Number=Sing _ _ _ _ 14 genes gene NOUN NNS Number=Plur _ _ _ _ 15 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 16 truncated truncate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 Nefs Nefs NOUN NNS Number=Plur _ _ _ _ 18 survived survive VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 which which PRON WDT PronType=Rel _ _ _ _ 21 rendered render VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 Nef Nef ADV RB _ _ _ _ _ 23 nonfunctional nonfunctional ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 12266 # text = These mutations paralleled those in other viral strains passaged in vitro. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 mutations mutation NOUN NNS Number=Plur _ _ _ _ 3 paralleled parallel VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 other other ADJ JJ Degree=Pos _ _ _ _ 7 viral viral ADJ JJ Degree=Pos _ _ _ _ 8 strains strains NOUN NNS Number=Plur _ _ _ _ 9 passaged passage VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 12267 # text = Not only do these positional effects of Nef reconcile diverse phenotypes of Nef and suggest a role for its N-terminal myristylation, but they also explain effects of Nef in HIV infection and progression to AIDS. 1 Not not ADV RB _ _ _ _ _ 2 only only ADV RB _ _ _ _ _ 3 do do VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 positional positional ADJ JJ Degree=Pos _ _ _ _ 6 effects effect NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 Nef Nef ADJ JJ Degree=Pos _ _ _ _ 9 reconcile reconcile NOUN NN Number=Sing _ _ _ _ 10 diverse diverse ADJ JJ Degree=Pos _ _ _ _ 11 phenotypes phenotype NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 Nef Nef NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 role role NOUN NN Number=Sing _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 N- N- SYM SYM _ _ _ _ SpaceAfter=No 21 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 22 myristylation myristylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 but but CCONJ CC _ _ _ _ _ 25 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 26 also also ADV RB _ _ _ _ _ 27 explain explain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 effects effect NOUN NNS Number=Plur _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 Nef Nef PROPN NNP Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 HIV HIV PROPN NNP Number=Sing _ _ _ _ 33 infection infection NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 progression progression NOUN NN Number=Sing _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 AIDS aids NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12268 # text = Document 0030012929 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012929 0030012929 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12269 # text = Regulation of nuclear factor-kappa B and its inhibitor 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 10 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ # sent_id = 12270 # text = I kappa B-alpha/MAD-3 in monocytes by Mycobacterium tuberculosis and during human tuberculosis. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa X GW _ _ _ _ _ 3 B- B- X GW _ _ _ _ SpaceAfter=No 4 alpha/ alphaith X ADD _ _ _ _ SpaceAfter=No 5 MAD mad NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 3 3 NUM CD NumType=Card _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 Mycobacterium Mycobacterium PROPN NNP Number=Sing _ _ _ _ 12 tuberculosis tuberculosis PROPN NNP Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 during during ADP IN _ _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 tuberculosis tuberculosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12271 # text = Blood monocytes from patients with active tuberculosis are activated in vivo, as evidenced by an increase in the stimulated release of proinflammatory cytokines, such as TNF-alpha, and the spontaneous expression of IL-2R. Further, monocytes from patients demonstrate an augmented susceptibility to a productive infection with HIV-1 in vitro. 1 Blood Blood NOUN NN Number=Sing _ _ _ _ 2 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 patients patient NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 active active ADJ JJ Degree=Pos _ _ _ _ 7 tuberculosis tuberculosis NOUN NN Number=Sing _ _ _ _ 8 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 as as SCONJ IN _ _ _ _ _ 14 evidenced evidence VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 increase increase NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 release release NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 24 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 such such ADJ JJ Degree=Pos _ _ _ _ 27 as as ADP IN _ _ _ _ _ 28 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT , _ _ _ _ SpaceAfter=No 30 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 spontaneous spontaneous ADJ JJ Degree=Pos _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 2R. 2R. PROPN NNP Number=Sing _ _ _ _ 40 Further further PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 43 from from ADP IN _ _ _ _ _ 44 patients patient NOUN NNS Number=Plur _ _ _ _ 45 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 46 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 47 augmented augmented ADJ JJ Degree=Pos _ _ _ _ 48 susceptibility susceptibility NOUN NN Number=Sing _ _ _ _ 49 to to ADP IN _ _ _ _ _ 50 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 51 productive productive ADJ JJ Degree=Pos _ _ _ _ 52 infection infection NOUN NN Number=Sing _ _ _ _ 53 with with ADP IN _ _ _ _ _ 54 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 55 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 56 1 1 NUM CD NumType=Card _ _ _ _ 57 in in ADP IN _ _ _ _ _ 58 vitro vitro NUM CD NumType=Card _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 12272 # text = Mycobacterium tuberculosis and its components are strong signals to activate monocytes to production of cytokines. 1 Mycobacterium Mycobacterium NOUN NN Number=Sing _ _ _ _ 2 tuberculosis tuberculosis NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 5 components component NOUN NNS Number=Plur _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 strong strong ADJ JJ Degree=Pos _ _ _ _ 8 signals signal NOUN NNS Number=Plur _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 activate activate VERB VB VerbForm=Inf _ _ _ _ 11 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 production production NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 12273 # text = In this study we examined the basis of activation of monocytes during active tuberculosis and by M. tuberculosis. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 basis basis NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 12 during during ADP IN _ _ _ _ _ 13 active active ADJ JJ Degree=Pos _ _ _ _ 14 tuberculosis tuberculosis NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 M. M. PROPN NNP Number=Sing _ _ _ _ 18 tuberculosis tuberculosis PROPN NNPS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 12274 # text = We found a constitutive degradation of I kappa B-alpha, the major cytoplasmic inhibitor of nuclear factor kappa B (NF-kappa B), in freshly isolated PBMC and monocytes from patients with tuberculosis. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 5 degradation degradation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B- B- PUNCT , _ _ _ _ SpaceAfter=No 10 alpha alpha INTJ UH _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 major major ADJ JJ Degree=Pos _ _ _ _ 14 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 15 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ _ 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b PROPN NNP Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ 25 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 freshly freshly ADV RB _ _ _ _ _ 30 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 PBMC Pbmc NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 34 from from ADP IN _ _ _ _ _ 35 patients patient NOUN NNS Number=Plur _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 tuberculosis tuberculosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 12275 # text = In contrast, I kappa B-alpha levels in PBMC and monocytes from healthy subjects or from patients with nontuberculous pulmonary conditions were intact. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 5 kappa kappa X FW Foreign=Yes _ _ _ _ 6 B- B- X GW _ _ _ _ SpaceAfter=No 7 alpha alpha X FW Foreign=Yes _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 PBMC Pbmc NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 15 subjects subjects NOUN NNS Number=Plur _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 patients patient NOUN NN Number=Sing _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 nontuberculous nontuberculous ADJ JJ Degree=Pos _ _ _ _ 21 pulmonary pulmonary ADJ JJ Degree=Pos _ _ _ _ 22 conditions condition NOUN NNS Number=Plur _ _ _ _ 23 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 intact intact ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 12276 # text = Further, by electrophoretic mobility shift assay, NF-kappa B was activated in monocytes from tuberculous patients. 1 Further further ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 5 mobility mobility NOUN NN Number=Sing _ _ _ _ 6 shift shift NOUN NN Number=Sing _ _ _ _ 7 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa PROPN NNP Number=Sing _ _ _ _ 12 B b PROPN NNP Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 tuberculous tuberculous ADJ JJ Degree=Pos _ _ _ _ 19 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 12277 # text = The expression of I kappa B-alpha gene, which is responsive to activation by NF-kappa B, was up-regulated in PBMC and monocytes from patients, but not in mononuclear cells from healthy subjects or those with nontuberculous lung diseases. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 5 kappa kappa X GW _ _ _ _ _ 6 B- B- X GW _ _ _ _ SpaceAfter=No 7 alpha alpha X GW _ _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 which which PRON WDT PronType=Rel _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 activation activation VERB VB VerbForm=Inf _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 was be VERB VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 22 up up ADP RP _ _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 PBMC Pbmc NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 29 from from ADP IN _ _ _ _ _ 30 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 but but CCONJ CC _ _ _ _ _ 33 not not ADV RB _ _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 mononuclear mononuclear ADJ JJ Degree=Pos _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ _ 37 from from ADP IN _ _ _ _ _ 38 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 39 subjects subjects NOUN NNS Number=Plur _ _ _ _ 40 or or CCONJ CC _ _ _ _ _ 41 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 42 with with ADP IN _ _ _ _ _ 43 nontuberculous nontuberculous ADJ JJ Degree=Pos _ _ _ _ 44 lung lung NOUN NN Number=Sing _ _ _ _ 45 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 12278 # text = By contrast, the expression of other adherence-associated early genes, such as IL-8 and IL-1 beta, was not up-regulated in PBMC of tuberculous patients. 1 By by ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 other other ADJ JJ Degree=Pos _ _ _ _ 8 adherence-associated adherence-associated ADJ JJ Degree=Pos _ _ _ _ 9 early early ADJ JJ Degree=Pos _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 such such ADJ JJ Degree=Pos _ _ _ _ 13 as as ADP IN _ _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 8 8 PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 not not PART RB _ _ _ _ _ 25 up up ADV RB _ _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 PBMC Pbmc NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 tuberculous tuberculous ADJ JJ Degree=Pos _ _ _ _ 32 patients patient NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 12279 # text = Further, M. 1 Further further ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 M. M. PROPN NNP Number=Sing _ _ _ _ # sent_id = 12280 # text = tuberculosis and its tuberculin, purified protein derivative, induced the degradation of I kappa B-alpha and the expression of I kappa B-alpha mRNA, and purified protein derivative induced the activation of NF-kappa B in monocytes. 1 tuberculosis tuberculosis NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 4 tuberculin tuberculin NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 derivative derivative NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 degradation degradation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 alpha alpha NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ 25 B- B- SYM NFP _ _ _ _ SpaceAfter=No 26 alpha alpha ADP IN _ _ _ _ _ 27 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 protein protein NOUN NN Number=Sing _ _ _ _ 32 derivative derivative NOUN NN Number=Sing _ _ _ _ 33 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 activation activation NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 kappa kappa NOUN NN Number=Sing _ _ _ _ 40 B b NOUN NN Number=Sing _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12281 # text = Document 0030012933 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012933 0030012933 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12282 # text = Mapping of the interaction site of the defective transcription factor in the class II major histocompatibility complex mutant cell line clone-13 to the divergent X2-box. 1 Mapping mapping NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 interaction interaction NOUN NN Number=Sing _ _ _ _ 5 site site NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 defective defective ADJ JJ Degree=Pos _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factor factor NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 class class NOUN NN Number=Sing _ _ _ _ 14 II ii NUM CD NumType=Card _ _ _ _ 15 major major ADJ JJ Degree=Pos _ _ _ _ 16 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 17 complex complex ADJ JJ Degree=Pos _ _ _ _ 18 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 line line NOUN NN Number=Sing _ _ _ _ 21 clone clone NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 -13 -13 NUM CD NumType=Card _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 divergent divergent NOUN NN Number=Sing _ _ _ _ 26 X2 x2 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - PUNCT : _ _ _ _ SpaceAfter=No 28 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12283 # text = We have previously described a mutant B lymphoblastoid cell line, Clone-13, that expresses HLA-DQ in the absence of HLA-DR and -DP. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 previously previously ADV RB _ _ _ _ _ 4 described describe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 lymphoblastoid lymphoblastoid NOUN NN Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 Clone Clone NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 17 expresses expresse VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 DQ Dq PROPN NNP Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 absence absence NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 DR dr PROPN NNP Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 DP. DP. PROPN NNP Number=Sing _ _ _ _ # sent_id = 12284 # text = Several criteria indicated that the defect in this cell line influences the activity of an isotype-specific transcription factor. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 criteria criterion NOUN NNS Number=Plur _ _ _ _ 3 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 defect defect NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 line line NOUN NN Number=Sing _ _ _ _ 11 influences influence VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 isotype-specific isotype-specific ADJ JJ Degree=Pos _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 12285 # text = Indeed, transient transfection of HLA-DRA and DQB reporter constructs indicated that the affected factor operates via cis-elements located between -141 base pairs and the transcription initiation site. 1 Indeed indeed ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 transient transient ADJ JJ Degree=Pos _ _ _ _ 4 transfection transfection NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 DRA DRA PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 DQB DQB PROPN NNP Number=Sing _ _ _ _ 11 reporter reporter NOUN NN Number=Sing _ _ _ _ 12 constructs construct NOUN NNS Number=Plur _ _ _ _ 13 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 operates operate NOUN NNS Number=Plur _ _ _ _ 19 via via ADP IN _ _ _ _ _ 20 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 elements element NOUN NNS Number=Plur _ _ _ _ 23 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 between between ADP IN _ _ _ _ _ 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 141 141 NUM CD NumType=Card _ _ _ _ 27 base base NOUN NN Number=Sing _ _ _ _ 28 pairs pair NOUN NNS Number=Plur _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ _ 32 initiation initiation NOUN NN Number=Sing _ _ _ _ 33 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 12286 # text = A series of hybrid DRA/DQB reporter constructs was generated to further map the relevant cis-elements in this system. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 series series NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 hybrid hybrid NOUN NN Number=Sing _ _ _ _ 5 DRA DRA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 / / PUNCT , _ _ _ _ SpaceAfter=No 7 DQB Dqb PROPN NNP Number=Sing _ _ _ _ 8 reporter reporter NOUN NN Number=Sing _ _ _ _ 9 constructs construct NOUN NNS Number=Plur _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 generated generate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 further further ADV RB _ _ _ _ _ 14 map map VERB VB VerbForm=Inf _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 17 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 elements element NOUN NNS Number=Plur _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 22 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 12287 # text = Insertion of oligonucleotides spanning the DQB X-box (but not the DQB-W region or the DQB Y-box) upstream of -141 in a DRA reporter plasmid rescued expression to nearly wild-type levels. 1 Insertion Insertion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 oligonucleotides oligonucleotides NOUN NNS Number=Plur _ _ _ _ 4 spanning spann VERB VBG VerbForm=Ger _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 DQB DQB PROPN NNP Number=Sing _ _ _ _ 7 X x PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 box box NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 but but CCONJ CC _ _ _ _ _ 12 not not ADV RB _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 DQB DQB NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 W W ADJ JJ Degree=Pos _ _ _ _ 17 region region NOUN NN Number=Sing _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 DQB DQB PROPN NNP Number=Sing _ _ _ _ 21 Y- y- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 upstream upstream NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 - - SYM SYM _ _ _ _ SpaceAfter=No 27 141 141 NUM CD NumType=Card _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 DRA DRA PROPN NNP Number=Sing _ _ _ _ 31 reporter reporter NOUN NN Number=Sing _ _ _ _ 32 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 33 rescued rescue VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 nearly nearly ADV RB _ _ _ _ _ 37 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 type type NOUN NN Number=Sing _ _ _ _ 40 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 12288 # text = Substitution promoters were then generated where the entire X-box, or only the X1- or X2-boxes of HLA-DRA were replaced with the analogous regions of HLA-DQB. 1 Substitution Substitution NOUN NN Number=Sing _ _ _ _ 2 promoters promoter NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 then then ADV RB PronType=Dem _ _ _ _ 5 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 where where ADV WRB PronType=Int _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 entire entire ADJ JJ Degree=Pos _ _ _ _ 9 X x NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 only only ADV RB _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 X1 X1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 X2 x2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 boxes boxe NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 DRA DRA PROPN NNP Number=Sing _ _ _ _ 26 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 replaced replace VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 analogous analogous ADJ JJ Degree=Pos _ _ _ _ 31 regions region NOUN NNS Number=Plur _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 HLA HLA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 DQB DQB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 12289 # text = The DQB X2-box was able to restore expression to the silent DRA reporter construct. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 DQB DQB NOUN NN Number=Sing _ _ _ _ 3 X2 x2 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - PUNCT : _ _ _ _ SpaceAfter=No 5 box box NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 able able ADJ JJ Degree=Pos _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 restore restore VERB VB VerbForm=Inf _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 silent silent ADJ JJ Degree=Pos _ _ _ _ 14 DRA DRa NOUN NN Number=Sing _ _ _ _ 15 reporter reporter NOUN NN Number=Sing _ _ _ _ 16 construct construct NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 12290 # text = Moreover, replacement of the DQB X2-box with the DRA X2-box markedly diminished the activity of the DQB promoter in the mutant cell. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 replacement replacement NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 DQB DQB PROPN NNP Number=Sing _ _ _ _ 7 X2 x2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 box box NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 DRA DRa NOUN NN Number=Sing _ _ _ _ 13 X2 X2 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT : _ _ _ _ SpaceAfter=No 15 box box NOUN NN Number=Sing _ _ _ _ 16 markedly markedly ADV RB _ _ _ _ _ 17 diminished diminish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 DQB DQB PROPN NNP Number=Sing _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 12291 # text = None of the hybrid reporter constructs were defective when transfected into the wild-type, HLA-DR/-DQ positive parental cell line, Jijoye. 1 None none NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 hybrid hybrid ADJ JJ Degree=Pos _ _ _ _ 5 reporter reporter NOUN NN Number=Sing _ _ _ _ 6 constructs construct NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 defective defective ADJ JJ Degree=Pos _ _ _ _ 9 when when ADV WRB PronType=Int _ _ _ _ 10 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 into into ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 HLA HLa NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 DR/- Dr/- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 DQ Dq NOUN NN Number=Sing _ _ _ _ 21 positive positive ADJ JJ Degree=Pos _ _ _ _ 22 parental parental ADJ JJ Degree=Pos _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 Jijoye Jijoye PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 12292 # text = These studies suggest that the divergent X2-box of the class II major histocompatibility complex promoters plays an important role in influencing differential expression of the human class II isotypes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 divergent divergent ADJ JJ Degree=Pos _ _ _ _ 7 X2 x2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 box box NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 class class NOUN NN Number=Sing _ _ _ _ 13 II ii NUM CD NumType=Card _ _ _ _ 14 major major ADJ JJ Degree=Pos _ _ _ _ 15 histocompatibility histocompatibility NOUN NN Number=Sing _ _ _ _ 16 complex complex NOUN NN Number=Sing _ _ _ _ 17 promoters promoter NOUN NNS Number=Plur _ _ _ _ 18 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 important important ADJ JJ Degree=Pos _ _ _ _ 21 role role NOUN NN Number=Sing _ _ _ _ 22 in in SCONJ IN _ _ _ _ _ 23 influencing influence VERB VBG VerbForm=Ger _ _ _ _ 24 differential differential ADJ JJ Degree=Pos _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 class class NOUN NN Number=Sing _ _ _ _ 30 II ii NUM CD NumType=Card _ _ _ _ 31 isotypes isotype NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12293 # text = Document 0030012934 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012934 0030012934 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12294 # text = Multiple transcription factors are required for activation of human interleukin 9 gene in T cells. 1 Multiple multiple ADJ JJ Degree=Pos _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 11 9 9 NUM CD NumType=Card _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 T t PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12295 # text = The genetic elements and regulatory mechanisms responsible for human interleukin 9 (IL-9) gene expression in a human T cell leukemia virus type I-transformed human T cell line, C5MJ2, were investigated. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 3 elements element NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 6 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 7 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 11 9 9 NUM CD NumType=Card _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 T T PROPN NNP Number=Sing _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 25 virus virus NOUN NN Number=Sing _ _ _ _ 26 type type NOUN NN Number=Sing _ _ _ _ 27 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 28 - - PUNCT : _ _ _ _ SpaceAfter=No 29 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 cell cell NOUN NN Number=Sing _ _ _ _ 33 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 C5MJ2 C5mj2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 38 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 12296 # text = We demonstrated that IL-9 gene expression is controlled, at least in part, by transcriptional activation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrated demonstrate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 9 9 NUM CD NumType=Card _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 at at ADV RB _ _ _ _ _ 13 least least ADV RBS Degree=Sup _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 part part ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 19 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 12297 # text = Transient expression of the luciferase reporter gene linked to serially deleted sequences of the 5'-flanking region of the IL-9 gene has revealed several positive and negative regulatory elements involved in the basal and inducible expression of the IL-9 gene in C5MJ2 cells. 1 Transient Transient ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 luciferase luciferase ADJ JJ Degree=Pos _ _ _ _ 6 reporter reporter NOUN NN Number=Sing _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 linked link VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 serially serially ADV RB _ _ _ _ _ 11 deleted delete VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 sequences sequence NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 19 region region NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 9 9 NUM CD NumType=Card _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ _ 26 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 several several ADJ JJ Degree=Pos _ _ _ _ 29 positive positive ADJ JJ Degree=Pos _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 negative negative ADJ JJ Degree=Pos _ _ _ _ 32 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 33 elements element NOUN NNS Number=Plur _ _ _ _ 34 involved involved ADJ JJ Degree=Pos _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 basal basal ADJ JJ Degree=Pos _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 40 expression expression NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 9 9 NUM CD NumType=Card _ _ _ _ 46 gene gene NOUN NN Number=Sing _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 C5MJ2 C5MJ2 NUM CD NumType=Card _ _ _ _ 49 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 12298 # text = An AP-1 site at -146 to -140 was shown to be involved in the expression of the IL-9 gene. 1 An a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 site site NOUN NN Number=Sing _ _ _ _ 6 at at ADP IN _ _ _ _ _ 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 146 146 NUM CD NumType=Card _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 - - SYM SYM _ _ _ _ SpaceAfter=No 11 140 140 NUM CD NumType=Card _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 involved involved VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 9 9 NUM CD NumType=Card _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 12299 # text = A proximal region between -46 and -80 was identified as the minimum sequence for the basal and inducible expression of the IL-9 gene in C5MJ2 cells. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 3 region region NOUN NN Number=Sing _ _ _ _ 4 between between ADP IN _ _ _ _ _ 5 -46 -46 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 80 80 NUM CD NumType=Card _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 as as ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 minimum minimum ADJ JJ Degree=Pos _ _ _ _ 14 sequence sequence NOUN NN Number=Sing _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 basal basal ADJ JJ Degree=Pos _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 9 9 NUM CD NumType=Card _ _ _ _ 26 gene gene NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 C5MJ2 C5MJ2 NUM CD NumType=Card _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 12300 # text = Within this region, an NF-kappaB site at -59 to -50 and its adjacent 20-base pair upstream sequence were demonstrated to play a critical role for the IL-9 promoter activity. 1 Within within ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 site site NOUN NN Number=Sing _ _ _ _ 10 at at ADP IN _ _ _ _ _ 11 - - SYM SYM _ _ _ _ SpaceAfter=No 12 59 59 NUM CD NumType=Card _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 - - SYM SYM _ _ _ _ SpaceAfter=No 15 50 50 NUM CD NumType=Card _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 19 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 base base NOUN NN Number=Sing _ _ _ _ 22 pair pair NOUN NN Number=Sing _ _ _ _ 23 upstream upstream NOUN NN Number=Sing _ _ _ _ 24 sequence sequence NOUN NN Number=Sing _ _ _ _ 25 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 to to PART TO _ _ _ _ _ 28 play play VERB VB VerbForm=Inf _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 critical critical ADJ JJ Degree=Pos _ _ _ _ 31 role role NOUN NN Number=Sing _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 9 9 NUM CD NumType=Card _ _ _ _ 37 promoter promoter NOUN NN Number=Sing _ _ _ _ 38 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 12301 # text = DNA-protein binding studies indicated that NF-kappaB, c-Jun, and potentially novel proteins (around 35 kDa) can bind to this important sequence. 1 DNA- DNA- SYM NFP _ _ _ _ SpaceAfter=No 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 binding bind VERB VBG VerbForm=Ger _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ _ 5 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 c c NOUN NN Abbr=Yes|Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 Jun Jun PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 potentially potentially ADV RB _ _ _ _ _ 17 novel novel NOUN NN Number=Sing _ _ _ _ 18 proteins protein NOUN NNS Number=Plur _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 around around ADV RB _ _ _ _ _ 21 35 35 NUM CD NumType=Card _ _ _ _ 22 kDa kDa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ _ 24 can can AUX MD VerbForm=Fin _ _ _ _ 25 bind bind VERB VB VerbForm=Inf _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 28 important important ADJ JJ Degree=Pos _ _ _ _ 29 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 12302 # text = Mutations at different sites within this proximal promoter region abolished the promoter activity as well as the DNA binding. 1 Mutations Mutation NOUN NNS Number=Plur _ _ _ _ 2 at at ADP IN _ _ _ _ _ 3 different different ADJ JJ Degree=Pos _ _ _ _ 4 sites site NOUN NNS Number=Plur _ _ _ _ 5 within within ADP IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 region region NOUN NN Number=Sing _ _ _ _ 10 abolished abolish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 as as ADV RB _ _ _ _ _ 15 well well ADV RB Degree=Pos _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 DNA dna NOUN NN Number=Sing _ _ _ _ 19 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 12303 # text = Taken together, these results suggest that the cooperation of different transcription factors is essential for IL-9 gene expression in T cells. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 cooperation cooperation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 different different ADJ JJ Degree=Pos _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factors factor NOUN NNS Number=Plur _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 essential essential ADJ JJ Degree=Pos _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 9 9 NUM CD NumType=Card _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12304 # text = Document 0030012935 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012935 0030012935 NUM CD NumType=Card _ _ _ _ 3 ends. ends. NOUN NN Number=Sing _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12305 # text = AML1 (CBFalpha2) cooperates with B cell-specific activating protein (BSAP/PAX5) in activation of the B cell-specific BLK gene promoter. 1 AML1 Aml1 PROPN NNP Number=Sing _ _ _ _ 2 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 CB Cb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 Falpha2 falpha2 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 cooperates cooperate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 specific specific ADJ JJ Degree=Pos _ _ _ _ 12 activating activating NOUN NN Number=Sing _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 BSAP BSAP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 / / PUNCT , _ _ _ _ SpaceAfter=No 17 PAX5 PAX5 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 B b PROPN NNP Number=Sing _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 specific specific ADJ JJ Degree=Pos _ _ _ _ 27 BLK Blk NOUN NN Number=Sing _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12306 # text = AML1 plays a critical role during hematopoiesis and chromosomal translocations involving AML1 are commonly associated with different forms of leukemia, including pre-B acute lymphoblastic leukemia. 1 AML1 Aml1 NOUN NN Number=Sing _ _ _ _ 2 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 critical critical ADJ JJ Degree=Pos _ _ _ _ 5 role role NOUN NN Number=Sing _ _ _ _ 6 during during ADP IN _ _ _ _ _ 7 hematopoiesis hematopoiesis NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 chromosomal chromosomal NOUN NN Number=Sing _ _ _ _ 10 translocations translocation NOUN NNS Number=Plur _ _ _ _ 11 involving involve VERB VBG VerbForm=Ger _ _ _ _ 12 AML1 Aml1 PROPN NNP Number=Sing _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 commonly commonly ADV RB _ _ _ _ _ 15 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 different different ADJ JJ Degree=Pos _ _ _ _ 18 forms form NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 including include VERB VBG VerbForm=Ger _ _ _ _ 23 pre pre X AFX _ _ _ _ SpaceAfter=No 24 -B -b X GW _ _ _ _ _ 25 acute acute X ADD _ _ _ _ _ 26 lymphoblastic lymphoblastic ADJ JJ Degree=Pos _ _ _ _ 27 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 12307 # text = To understand the function of AML1 during B cell differentiation, we analyzed regulatory regions of B cell-specific genes for potential AML1-binding sites and have identified a putative AML1-binding site in the promoter of the B cell-specific tyrosine kinase gene, blk. 1 To to PART TO _ _ _ _ _ 2 understand understand VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 function function NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 AML1 AML1 PROPN NNP Number=Sing _ _ _ _ 7 during during ADP IN _ _ _ _ _ 8 B b PROPN NNP Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 13 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 15 regions region NOUN NNS Number=Plur _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 specific specific ADJ JJ Degree=Pos _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ _ 22 for for ADP IN _ _ _ _ _ 23 potential potential ADJ JJ Degree=Pos _ _ _ _ 24 AML1 Aml1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 binding binding VERB VBG VerbForm=Ger _ _ _ _ 27 sites site NOUN NNS Number=Plur _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 30 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 putative putative ADJ JJ Degree=Pos _ _ _ _ 33 AML1 Aml1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 binding binding VERB VBG VerbForm=Ger _ _ _ _ 36 site site NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 promoter promoter NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 B b PROPN NNP Number=Sing _ _ _ _ 43 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 specific specific ADJ JJ Degree=Pos _ _ _ _ 46 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 47 kinase kinase NOUN NN Number=Sing _ _ _ _ 48 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 blk blk NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 12308 # text = Gel mobility shift assays and transient transfection assays demonstrate that AML1 binds specifically to this site in the blk promoter and this binding site is important for blk promoter activity. 1 Gel gel NOUN NN Number=Sing _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assays assay NOUN NNS Number=Plur _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 transient transient ADJ JJ Degree=Pos _ _ _ _ 7 transfection transfection NOUN NN Number=Sing _ _ _ _ 8 assays assay NOUN NNS Number=Plur _ _ _ _ 9 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 AML1 AML1 NUM CD NumType=Card _ _ _ _ 12 binds bind NOUN NNS Number=Plur _ _ _ _ 13 specifically specifically ADV RB _ _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 16 site site NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 blk blk NOUN NN Number=Sing _ _ _ _ 20 promoter promoter NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 23 binding binding VERB VBG VerbForm=Ger _ _ _ _ 24 site site NOUN NN Number=Sing _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 important important ADJ JJ Degree=Pos _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 blk blk ADJ JJ Degree=Pos _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ _ 30 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 12309 # text = Furthermore, in vitro binding analysis revealed that the AML1 runt DNA-binding domain physically interacts with the paired DNA-binding domain of BSAP, a B cell-specific transcription factor. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 5 binding binding VERB VBG VerbForm=Ger _ _ _ _ 6 analysis analysis NOUN NN Number=Sing _ _ _ _ 7 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 AML1 Aml1 NOUN NN Number=Sing _ _ _ _ 11 runt runt NOUN NN Number=Sing _ _ _ _ 12 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 binding binding VERB VBG VerbForm=Ger _ _ _ _ 15 domain domain NOUN NN Number=Sing _ _ _ _ 16 physically physically ADV RB _ _ _ _ _ 17 interacts interact VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 paired paire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 binding binding VERB VBG VerbForm=Ger _ _ _ _ 24 domain domain NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 BSAP BSAP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 B b ADJ JJ Degree=Pos _ _ _ _ 30 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 specific specific ADJ JJ Degree=Pos _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 12310 # text = BSAP has been shown previously to be important for B cell-specific regulation of the blk gene. 1 BSAP Bsap SYM NFP _ _ _ _ _ 2 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 previously previously ADV RB _ _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 important important ADJ JJ Degree=Pos _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 B b ADJ JJ Degree=Pos _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 regulation regulation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 blk blk ADJ JJ Degree=Pos _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 12311 # text = Physical interaction of AML1 with BSAP correlates with functional cooperativity in transfection studies where AML1 and BSAP synergistically activate blk promoter transcription by more than 50-fold. 1 Physical physical ADJ JJ Degree=Pos _ _ _ _ 2 interaction interaction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 AML1 AML1 PROPN NNP Number=Sing _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 BSAP BSAP PROPN NNP Number=Sing _ _ _ _ 7 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 functional functional ADJ JJ Degree=Pos _ _ _ _ 10 cooperativity cooperativity NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 transfection transfection NOUN NN Number=Sing _ _ _ _ 13 studies study NOUN NNS Number=Plur _ _ _ _ 14 where where ADV WRB PronType=Rel _ _ _ _ 15 AML1 AML1 PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 BSAP Bsap PROPN NNP Number=Sing _ _ _ _ 18 synergistically synergistically ADV RB _ _ _ _ _ 19 activate activate VERB VB VerbForm=Inf _ _ _ _ 20 blk blk NOUN NN Number=Sing _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 more more ADJ JJR Degree=Cmp _ _ _ _ 25 than than ADP IN _ _ _ _ _ 26 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 fold fold NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 12312 # text = These results demonstrate physical and functional interactions between AML1 and BSAP and suggest that AML1 is an important factor for regulating a critical B cell-specific gene, blk. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 physical physical ADJ JJ Degree=Pos _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 functional functional ADJ JJ Degree=Pos _ _ _ _ 7 interactions interaction NOUN NNS Number=Plur _ _ _ _ 8 between between ADP IN _ _ _ _ _ 9 AML1 Aml1 NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 BSAP Bsap NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 AML1 AML1 PROPN NNP Number=Sing _ _ _ _ 16 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 important important ADJ JJ Degree=Pos _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 for for SCONJ IN _ _ _ _ _ 21 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 critical critical ADJ JJ Degree=Pos _ _ _ _ 24 B b NOUN NN Number=Sing _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 specific specific ADJ JJ Degree=Pos _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 blk blk NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12313 # text = Document 0030012937 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012937 0030012937 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12314 # text = A shortened life span of EKLF-/- adult erythrocytes, due to a deficiency of beta-globin chains, is ameliorated by human gamma-globin chains. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 shortened shortened ADJ JJ Degree=Pos _ _ _ _ 3 life life NOUN NN Number=Sing _ _ _ _ 4 span span NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 EKLF EKLF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 -/- -/- PUNCT . _ _ _ _ _ 8 adult adult NOUN NN Number=Sing _ _ _ _ 9 erythrocytes erythrocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 due due ADP IN _ _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 deficiency deficiency NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 globin globin NOUN NN Number=Sing _ _ _ _ 19 chains chain NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 ameliorated ameliorate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 globin globin NOUN NN Number=Sing _ _ _ _ 28 chains chain NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12315 # text = Using homologous recombination, both EKLF alleles in murine embryonic stem (ES) cells were inactivated. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 homologous homologous ADJ JJ Degree=Pos _ _ _ _ 3 recombination recombination NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 both both CCONJ CC _ _ _ _ _ 6 EKLF Eklf NOUN NN Number=Sing _ _ _ _ 7 alleles allele NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 murine murine ADJ JJ Degree=Pos _ _ _ _ 10 embryonic embryonic ADJ JJ Degree=Pos _ _ _ _ 11 stem stem NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 ES E INTJ UH _ _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 inactivated inactivate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 12316 # text = These EKLF-/- ES cells were capable of undergoing in vitro differentiation to form definitive erythroid colonies that were similar in size and number to those formed by wild-type ES cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 EKLF EKLF NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 -/- -/- PUNCT . _ _ _ _ _ 4 ES ES ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 capable capable ADJ JJ Degree=Pos _ _ _ _ 8 of of SCONJ IN _ _ _ _ _ 9 undergoing undergo VERB VBG VerbForm=Ger _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 12 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 form form VERB VB VerbForm=Inf _ _ _ _ 15 definitive definitive ADJ JJ Degree=Pos _ _ _ _ 16 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 17 colonies colony NOUN NNS Number=Plur _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 similar similar ADJ JJ Degree=Pos _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 size size NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 number number NOUN NN Number=Sing _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 27 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 type type NOUN NN Number=Sing _ _ _ _ 32 ES e ADJ JJ Degree=Pos _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 12317 # text = However, the EKLF-/- colonies were poorly hemoglobinized and enucleated erythrocytes in these colonies contained numerous Heinz bodies. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 EKLF Eklf NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 -/- -/- PUNCT . _ _ _ _ _ 6 colonies coloney NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 poorly poorly ADV RB _ _ _ _ _ 9 hemoglobinized hemoglobinize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 enucleated enucleate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 erythrocytes erythrocyte NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 15 colonies colony NOUN NNS Number=Plur _ _ _ _ 16 contained containe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 numerous numerous ADJ JJ Degree=Pos _ _ _ _ 18 Heinz Heinz NOUN NN Number=Sing _ _ _ _ 19 bodies body NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 12318 # text = Reverse transcriptase-polymerase chain reaction (RT-PCR) analyses revealed that adult and embryonic globin genes were appropriately regulated, with the exception of beta h1-globin, which continued to be expressed at a very low level. 1 Reverse reverse NOUN NN Number=Sing _ _ _ _ 2 transcriptase transcriptase NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 5 chain chain NOUN NN Number=Sing _ _ _ _ 6 reaction reaction NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 RT-PCR Rt-pcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 analyses analysis NOUN NNS Number=Plur _ _ _ _ 11 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 13 adult adult NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 embryonic embryonic ADJ JJ Degree=Pos _ _ _ _ 16 globin globin NOUN NN Number=Sing _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ _ 18 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 appropriately appropriately ADV RB _ _ _ _ _ 20 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 exception exception NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 beta beta NOUN NN Number=Sing _ _ _ _ 27 h1 h1 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 -globin -globin NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 which which PRON WDT PronType=Rel _ _ _ _ 31 continued continue VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 32 to to PART TO _ _ _ _ _ 33 be be AUX VB VerbForm=Inf _ _ _ _ 34 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 at at ADP IN _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 very very ADV RB _ _ _ _ _ 38 low low ADJ JJ Degree=Pos _ _ _ _ 39 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 12319 # text = The ratio of adult beta-globin/alpha-globin mRNA in the mutant ES cells was 1/15 of that in wild-type ES cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 ratio ratio NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 adult adult NOUN NN Number=Sing _ _ _ _ 5 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 -globin/ -globin/ ADP IN Abbr=Yes _ _ _ SpaceAfter=No 7 alpha-globin alpha-globin ADJ JJ Degree=Pos _ _ _ _ 8 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 12 ES ES ADJ JJ Degree=Pos _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 1/15 1/15 NUM CD NumType=Card _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 type type NOUN NN Number=Sing _ _ _ _ 22 ES ES ADJ JJ Degree=Pos _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 12320 # text = When the EKLF-/- cells were injected into blastocysts, they did not contribute at a detectable level to the mature erythrocyte compartment of the chimeric animals, based on analysis of glucose phosphate isomerase-1 (GPI-1) isozymes and hemoglobins that distinguish ES cell-derived erythrocytes from host blastocyst-derived erythrocytes. 1 When when ADV WRB PronType=Int _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 EKLF EKLF NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 -/- -/- PUNCT . _ _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 injected inject VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 into into ADP IN _ _ _ _ _ 9 blastocysts blastocyst NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 12 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 not not PART RB _ _ _ _ _ 14 contribute contribute VERB VB VerbForm=Inf _ _ _ _ 15 at at ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 18 level level NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 mature mature ADJ JJ Degree=Pos _ _ _ _ 22 erythrocyte erythrocyte NOUN NN Number=Sing _ _ _ _ 23 compartment compartment NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 chimeric chimeric ADJ JJ Degree=Pos _ _ _ _ 27 animals animal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 on on ADP IN _ _ _ _ _ 31 analysis analysis NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 glucose glucose NOUN NN Number=Sing _ _ _ _ 34 phosphate phosphate NOUN NN Number=Sing _ _ _ _ 35 isomerase isomerase NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT , _ _ _ _ SpaceAfter=No 37 1 1 NUM CD NumType=Card _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 GPI GPI NUM CD NumType=Card _ _ _ SpaceAfter=No 40 - - SYM SYM _ _ _ _ SpaceAfter=No 41 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 42 ) ) PUNCT -RRB- _ _ _ _ _ 43 isozymes isozyme NOUN NNS Number=Plur _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 hemoglobins hemoglobin NOUN NNS Number=Plur _ _ _ _ 46 that that PRON WDT PronType=Rel _ _ _ _ 47 distinguish distinguish VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 48 ES ES ADV RB _ _ _ _ _ 49 cell cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 52 erythrocytes erythrocyte NOUN NNS Number=Plur _ _ _ _ 53 from from ADP IN _ _ _ _ _ 54 host host NOUN NN Number=Sing _ _ _ _ 55 blastocyst blastocyst NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 57 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 58 erythrocytes erythrocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 12321 # text = In contrast, semiquantitative RT-PCR analysis of RNA from reticulocytes of the same chimeric animals suggested that the ES cell-derived reticulocytes were present at a level of 6% to 8%. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 semiquantitative semiquantitative ADJ JJ Degree=Pos _ _ _ _ 5 RT Rt NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 PCR Pcr NOUN NN Number=Sing _ _ _ _ 8 analysis analysis NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 RNA RNA PROPN NNP Number=Sing _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 reticulocytes reticulocyte NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 same same ADJ JJ Degree=Pos _ _ _ _ 16 chimeric chimeric ADJ JJ Degree=Pos _ _ _ _ 17 animals animal NOUN NNS Number=Plur _ _ _ _ 18 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 ES ES PROPN NNPS Number=Plur _ _ _ _ 22 cell cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 reticulocytes reticulocyte NOUN NNS Number=Plur _ _ _ _ 26 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 present present ADJ JJ Degree=Pos _ _ _ _ 28 at at ADP IN _ _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 level level NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 % % SYM NN Number=Sing _ _ _ _ 34 to to ADP IN _ _ _ _ _ 35 8% 8% X XX _ _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 12322 # text = This indicated that the EKLF-/- erythrocytes in adult animals must be short-lived, apparently due to the imbalance of beta- versus alpha-globin chains, leading to the precipitation of excess alpha-globin chains to form Heinz bodies. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 EKLF EKLF NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 /- /- PUNCT . _ _ _ _ _ 8 erythrocytes erythrocyte NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 adult adult ADJ JJ Degree=Pos _ _ _ _ 11 animals animal NOUN NNS Number=Plur _ _ _ _ 12 must must AUX MD VerbForm=Fin _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 short short ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 -lived -live VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 apparently apparently ADV RB _ _ _ _ _ 18 due due ADP IN _ _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 imbalance imbalance NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ _ 25 versus versus CCONJ CC _ _ _ _ _ 26 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 globin globin NOUN NN Number=Sing _ _ _ _ 29 chains chains NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 leading lead VERB VBG VerbForm=Ger _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 precipitation precipitation NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 excess excess NOUN NN Number=Sing _ _ _ _ 37 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 globin globin NOUN NN Number=Sing _ _ _ _ 40 chains chain NOUN NNS Number=Plur _ _ _ _ 41 to to PART TO _ _ _ _ _ 42 form form VERB VB VerbForm=Inf _ _ _ _ 43 Heinz Heinz PROPN NNP Number=Sing _ _ _ _ 44 bodies body NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 12323 # text = Consistent with this hypothesis, the short life span was ameliorated by introduction into the EKLF-/- ES cells of a human LCR/gamma-globin gene, as evidenced by the presence of ES cell-derived reticulocytes as well as mature erythrocytes in the blood of the chimeric animals. 1 Consistent consistent ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 hypothesis hypothesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 short short ADJ JJ Degree=Pos _ _ _ _ 8 life life NOUN NN Number=Sing _ _ _ _ 9 span span NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 ameliorated ameliorate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 introduction introduction NOUN NN Number=Sing _ _ _ _ 14 into into ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 EKLF Eklf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 -/- -/- PUNCT . _ _ _ _ _ 18 ES E VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 LCR/ Lcr/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 globin globin NOUN NN Number=Sing _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 as as SCONJ IN _ _ _ _ _ 30 evidenced evidence VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 by by ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 presence presence NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 ES ES PROPN NNP Number=Sing _ _ _ _ 36 cell cell ADV RB Degree=Pos _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 reticulocytes reticulocyte NOUN NNS Number=Plur _ _ _ _ 40 as as ADV RB _ _ _ _ _ 41 well well ADV RB Degree=Pos _ _ _ _ 42 as as ADP IN _ _ _ _ _ 43 mature mature ADJ JJ Degree=Pos _ _ _ _ 44 erythrocytes erythrocyte NOUN NNS Number=Plur _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 blood blood NOUN NN Number=Sing _ _ _ _ 48 of of ADP IN _ _ _ _ _ 49 the the DET DT Definite=Def|PronType=Art _ _ _ _ 50 chimeric chimeric ADJ JJ Degree=Pos _ _ _ _ 51 animals animal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12324 # text = Document 0030012942 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012942 0030012942 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12325 # text = Activation of NF-kappa B in vivo is regulated by multiple phosphorylations. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 vivo vivo NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 13 phosphorylations phosphorylation NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12326 # text = The activation of nuclear factor kappa B (NF-kappa B) in intact cells is mechanistically not well understood. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 intact intact ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 mechanistically mechanistically ADV RB _ _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 well well ADV RB Degree=Pos _ _ _ _ 21 understood understand VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 12327 # text = Therefore we investigated the modifications imposed on NF-kappa B/I kappa B components following stimulation and show that the final step of NF-kappa B induction in vivo involves phosphorylation of several members of the NF-kappa B/I kappa B protein families. 1 Therefore therefore ADV RB _ _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 modifications modification NOUN NNS Number=Plur _ _ _ _ 6 imposed impose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B/ Bith PUNCT HYPH _ _ _ _ SpaceAfter=No 12 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ 14 B b PROPN NNP Number=Sing _ _ _ _ 15 components component NOUN NNS Number=Plur _ _ _ _ 16 following follow VERB VBG VerbForm=Ger _ _ _ _ 17 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 final final ADJ JJ Degree=Pos _ _ _ _ 23 step step NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ _ 29 induction induction NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 vivo vivo ADJ JJ Degree=Pos _ _ _ _ 32 involves involf NOUN NNS Number=Plur _ _ _ _ 33 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 several several ADJ JJ Degree=Pos _ _ _ _ 36 members member NOUN NNS Number=Plur _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 kappa kappa NOUN NN Number=Sing _ _ _ _ 42 B/ B/ PUNCT HYPH _ _ _ _ SpaceAfter=No 43 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 44 kappa kappa X FW Foreign=Yes _ _ _ _ 45 B b ADJ JJ Degree=Pos _ _ _ _ 46 protein protein NOUN NN Number=Sing _ _ _ _ 47 families family NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 12328 # text = In HeLa cells as well as in B cells, TNF-alpha rapidly induced nuclear translocation primarily of p50-p65, but not of c-rel. 1 In in ADP IN _ _ _ _ _ 2 HeLa Hela PROPN NNP Number=Sing _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 as as ADV RB _ _ _ _ _ 5 well well ADV RB Degree=Pos _ _ _ _ 6 as as ADP IN _ _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 B b ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 alpha alpha X FW Foreign=Yes _ _ _ _ 14 rapidly rapidly ADV RB _ _ _ _ _ 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 translocation translocation NOUN NN Number=Sing _ _ _ _ 18 primarily primarily ADV RB _ _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 p65 p65 NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 but but CCONJ CC _ _ _ _ _ 25 not not ADV RB _ _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 c- c- SYM NFP _ _ _ _ SpaceAfter=No 28 rel rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 12329 # text = Both NF-kappa B precursors and I kappa B alpha became strongly phosphorylated with the same kinetics. 1 Both both DET DT _ _ _ _ _ 2 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 precursors precursor NOUN NNS Number=Plur _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B B PROPN NNP Number=Sing _ _ _ _ 11 alpha alpha PROPN NNP Number=Sing _ _ _ _ 12 became become VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 strongly strongly ADV RB _ _ _ _ _ 14 phosphorylated phosphorylate ADJ JJ Degree=Pos _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 same same ADJ JJ Degree=Pos _ _ _ _ 18 kinetics kinetic NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 12330 # text = In addition to the inducible phosphorylation after stimulation, B lymphocytes containing constitutive nuclear NF-kappa B revealed constitutively phosphorylated p65 and I kappa B alpha. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 6 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 7 after after ADP IN _ _ _ _ _ 8 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 12 containing contain VERB VBG VerbForm=Ger _ _ _ _ 13 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 14 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 15 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 revealed reveal VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 constitutively constitutively ADV RB _ _ _ _ _ 21 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 p65 p65 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 25 kappa kappa PROPN NNP Number=Sing _ _ _ _ 26 B b PROPN NNP Number=Sing _ _ _ _ 27 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 12331 # text = Phosphorylation was accompanied by induced processing of the precursors p100 and p105 and by degradation of I kappa B alpha. 1 Phosphorylation Phosphorylation NOUN NN Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 accompanied accompany VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 processing processing NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 precursors precursor NOUN NNS Number=Plur _ _ _ _ 10 p100 p100 NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 p105 p105 NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 degradation degradation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B B PROPN NNP Number=Sing _ _ _ _ 20 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 12332 # text = As an in vitro model we show that phosphorylation of p105 impedes its ability to interact with NF-kappa B, as has been shown before for I kappa B alpha. 1 As as ADP IN _ _ _ _ _ 2 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 5 model model NOUN NN Number=Sing _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 9 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 p105 p105 NOUN NN Number=Sing _ _ _ _ 12 impedes impede VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 ability ability NOUN NN Number=Sing _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 interact interact VERB VB VerbForm=Inf _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 as as SCONJ IN _ _ _ _ _ 24 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 26 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 before before ADP IN _ _ _ _ _ 28 for for ADP IN _ _ _ _ _ 29 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 30 kappa kappa X FW Foreign=Yes _ _ _ _ 31 B b ADJ JJ Degree=Pos _ _ _ _ 32 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 12333 # text = Surprisingly, even p65, but not c-rel, was phosphorylated after induction in vivo, suggesting that TNF-alpha selectively activates only specific NF-kappa B heteromers and that modifications regulate not only I kappa B molecules but also NF-kappa B molecules. 1 Surprisingly surprisingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 even even ADV RB _ _ _ _ _ 4 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 but but CCONJ CC _ _ _ _ _ 7 not not ADV RB _ _ _ _ _ 8 c- c- SYM NFP _ _ _ _ SpaceAfter=No 9 rel rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 after after ADP IN _ _ _ _ _ 14 induction induction NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 alpha alpha PROPN NNP Number=Sing _ _ _ _ 23 selectively selectively ADV RB _ _ _ _ _ 24 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 only only ADV RB _ _ _ _ _ 26 specific specific ADJ JJ Degree=Pos _ _ _ _ 27 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ _ 31 heteromers heteromer NOUN NNS Number=Plur _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 that that SCONJ IN _ _ _ _ _ 34 modifications modification NOUN NNS Number=Plur _ _ _ _ 35 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 36 not not ADV RB _ _ _ _ _ 37 only only ADV RB _ _ _ _ _ 38 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 39 kappa kappa X GW _ _ _ _ _ 40 B b ADJ JJ Degree=Pos _ _ _ _ 41 molecules molecule NOUN NNS Number=Plur _ _ _ _ 42 but but CCONJ CC _ _ _ _ _ 43 also also ADV RB _ _ _ _ _ 44 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 kappa kappa NOUN NN Number=Sing _ _ _ _ 47 B b NOUN NN Number=Sing _ _ _ _ 48 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 12334 # text = In fact, cellular NF-kappa B activity was phosphorylation-dependent and the DNA binding activity of p65-containing NF-kappa B was enhanced by phosphorylation in vitro. 1 In in ADP IN _ _ _ _ _ 2 fact fact NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 cellular celular ADJ JJ Degree=Pos _ _ _ _ 5 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 activity activity NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ _ 17 binding binde VERB VBG VerbForm=Ger _ _ _ _ 18 activity activity NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 containing contain VERB VBG VerbForm=Ger _ _ _ _ 23 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa PROPN NNP Number=Sing _ _ _ _ 26 B b PROPN NNP Number=Sing _ _ _ _ 27 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 28 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 12335 # text = Furthermore, we found that the induction by hydrogen peroxide of NF-kappa B translocation to the nucleus, which is assumed to be triggered by reactive oxygen intermediates, also coincided with incorporation of phosphate into the same subunits that were modified after stimulation by TNF-alpha. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 induction induction NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 hydrogen hydrogen NUM CD NumType=Card _ _ _ _ 10 peroxide peroxide NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 translocation translocation NOUN NN Number=Sing _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 which which PRON WDT PronType=Rel _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 assumed assume VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 be be AUX VB VerbForm=Inf _ _ _ _ 26 triggered trigger VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 29 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 30 intermediates intermediate NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 also also ADV RB _ _ _ _ _ 33 coincided coincide VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 incorporation incorporation NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 phosphate phosphate NOUN NN Number=Sing _ _ _ _ 38 into into ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 same same ADJ JJ Degree=Pos _ _ _ _ 41 subunits subunit NOUN NNS Number=Plur _ _ _ _ 42 that that PRON WDT PronType=Rel _ _ _ _ 43 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 44 modified modify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 45 after after ADP IN _ _ _ _ _ 46 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 47 by by ADP IN _ _ _ _ _ 48 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 12336 # text = Thus, phosphorylation appears to be a general mechanism for activation of NF-kappa B in vivo. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 4 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 general general ADJ JJ Degree=Pos _ _ _ _ 9 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 vivo. vivo. NOUN NN Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12337 # text = Document 0030012944 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012944 0030012944 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12338 # text = Identification of transcriptional suppressor proteins that bind to the negative regulatory element of the human immunodeficiency virus type 1. 1 Identification identification NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 4 suppressor suppressor NOUN NN Number=Sing _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ _ 6 that that PRON WDT PronType=Rel _ _ _ _ 7 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 negative negative ADJ JJ Degree=Pos _ _ _ _ 11 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 17 virus virus NOUN NN Number=Sing _ _ _ _ 18 type type NOUN NN Number=Sing _ _ _ _ 19 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12339 # text = Two different proteins which independently bound to neighboring sequences within the negative regulatory element (NRE) of human immunodeficiency virus type 1 (HIV-1) were detected in the nuclear extract of a virus-infected human T cell line. 1 Two two NUM CD NumType=Card _ _ _ _ 2 different different ADJ JJ Degree=Pos _ _ _ _ 3 proteins protein NOUN NNS Number=Plur _ _ _ _ 4 which which PRON WDT PronType=Rel _ _ _ _ 5 independently independently ADV RB _ _ _ _ _ 6 bound bound ADJ JJ Degree=Pos _ _ _ _ 7 to to SCONJ IN _ _ _ _ _ 8 neighboring neighbore VERB VBG VerbForm=Ger _ _ _ _ 9 sequences sequence NOUN NNS Number=Plur _ _ _ _ 10 within within ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 negative negative ADJ JJ Degree=Pos _ _ _ _ 13 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 14 element element NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 NRE NRE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 21 virus virus NOUN NN Number=Sing _ _ _ _ 22 type type NOUN NN Number=Sing _ _ _ _ 23 1 1 NUM CD NumType=Card _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 X LS _ _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 30 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 34 extract extract NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 human human ADJ JJ Degree=Pos _ _ _ _ 41 T t PROPN NNP Number=Sing _ _ _ _ 42 cell cell NOUN NN Number=Sing _ _ _ _ 43 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 12340 # text = One of the factors bound to a novel dyad symmetrical sequence. 1 One one NUM CD NumType=Card _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 factors factor NOUN NNS Number=Plur _ _ _ _ 5 bound bound VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 novel novel NOUN NN Number=Sing _ _ _ _ 9 dyad dyad NOUN NN Number=Sing _ _ _ _ 10 symmetrical symmetrical ADJ JJ Degree=Pos _ _ _ _ 11 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 12341 # text = This sequence is well conserved in various HIV-1 isolates and partial homology was found with the promoter region of the human retinoblastoma gene. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 sequence sequence NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 well well ADV RB Degree=Pos _ _ _ _ 5 conserved conserve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 various various ADJ JJ Degree=Pos _ _ _ _ 8 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 isolates isolate NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 partial partial ADJ JJ Degree=Pos _ _ _ _ 14 homology homology NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 region region NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 retinoblastoma retinoblastoma NOUN NN Number=Sing _ _ _ _ 25 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 12342 # text = Similar DNA binding activity was detected in a variety of virus-uninfected human T cell lines and HeLa cells by means of a gel mobility shift assay. 1 Similar similar ADJ JJ Degree=Pos _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ _ 3 binding binding VERB VBG VerbForm=Ger _ _ _ _ 4 activity activity NOUN NN Number=Sing _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 variety variety NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 uninfected uninfect ADJ JJ Degree=Pos _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 T t NOUN NN Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 lines line NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 HeLa Hela ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 means means NOUN NNS Number=Plur _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 gel gel NOUN NN Number=Sing _ _ _ _ 26 mobility mobility NOUN NN Number=Sing _ _ _ _ 27 shift shift NOUN NN Number=Sing _ _ _ _ 28 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 12343 # text = The other factor bound to a putative AP-1 recognition sequence predicted for the HIV-1 NRE. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 other other ADJ JJ Degree=Pos _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 bound bound ADJ JJ Degree=Pos _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 putative putative ADJ JJ Degree=Pos _ _ _ _ 8 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 recognition recognition NOUN NN Number=Sing _ _ _ _ 12 sequence sequence NOUN NN Number=Sing _ _ _ _ 13 predicted predict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 NRE Nre NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 12344 # text = However, this factor did not bind to a typical AP-1 site. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 not not PART RB _ _ _ _ _ 7 bind bind VERB VB VerbForm=Inf _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 typical typical ADJ JJ Degree=Pos _ _ _ _ 11 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 12345 # text = The insertion of multiple copies of the binding site for the former or latter factor into a heterologous promoter reduced the promoter activity to one-tenth or one-third, respectively. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 insertion insertion NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 5 copies copy NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 site site NOUN NN Number=Sing _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 former former ADJ JJ Degree=Pos _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 latter latter ADJ JJ Degree=Pos _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 into into ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 heterologous heterologous ADJ JJ Degree=Pos _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 promoter promoter NOUN NN Number=Sing _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 one one NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 tenth tenth NOUN NN Number=Sing _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 one one NUM CD NumType=Card _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 third third NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 12346 # text = Thus, each factor may function as a novel negative regulator of transcription. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 each each DET DT _ _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 may may AUX MD VerbForm=Fin _ _ _ _ 6 function function VERB VB VerbForm=Inf _ _ _ _ 7 as as ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 novel novel NOUN NN Number=Sing _ _ _ _ 10 negative negative ADJ JJ Degree=Pos _ _ _ _ 11 regulator regulator NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12347 # text = Document 0030012951 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012951 0030012951 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12348 # text = Transcription factors of T and B lymphocytes--basic research and clinical perspectives for gastroenterology. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 T T PROPN NNP Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 B b ADJ JJ Degree=Pos _ _ _ _ 7 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 -- -- PUNCT , _ _ _ _ SpaceAfter=No 9 basic basic ADJ JJ Degree=Pos _ _ _ _ 10 research research NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 13 perspectives perspective NOUN NNS Number=Plur _ _ _ _ 14 for for ADP IN _ _ _ _ _ 15 gastroenterology gastroenterology NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12349 # text = Tissue specific regulation of gene expression by transcription factors is a fascinating new field in molecular immunology. 1 Tissue Tissue ADP IN _ _ _ _ _ 2 specific specific ADJ JJ Degree=Pos _ _ _ _ 3 regulation regulation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 gene gene ADJ JJ Degree=Pos _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 factors factor NOUN NNS Number=Plur _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 fascinating fascinating ADJ JJ Degree=Pos _ _ _ _ 13 new new ADJ JJ Degree=Pos _ _ _ _ 14 field field NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 17 immunology immunology NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 12350 # text = This review summarizes data on specific regulation of promoters and enhancers by nuclear trans-acting factors in lymphocytes. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 review review NOUN NN Number=Sing _ _ _ _ 3 summarizes summarize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 data data NOUN NN Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 specific specific ADJ JJ Degree=Pos _ _ _ _ 7 regulation regulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 promoters promoter NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 enhancers enhancer NOUN NNS Number=Plur _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 acting act VERB VBG VerbForm=Ger _ _ _ _ 17 factors factor NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 12351 # text = The structural classes of transcription factors are described and basic methods for detection and analysis of transcription factors are detailed. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 structural structural ADJ JJ Degree=Pos _ _ _ _ 3 classes class NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 factors factor NOUN NNS Number=Plur _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 basic basic ADJ JJ Degree=Pos _ _ _ _ 11 methods method NOUN NNS Number=Plur _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 detection detection NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 analysis analysis NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 factors factor NOUN NNS Number=Plur _ _ _ _ 19 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 detailed detaile ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 12352 # text = Furthermore, the most important trans-acting factors of T and B lymphocytes (e.g. NF-kB, NF-AT and STAT families) and their functional importance are described. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 most most ADV RBS _ _ _ _ _ 5 important important ADJ JJ Degree=Pos _ _ _ _ 6 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 acting act VERB VBG VerbForm=Ger _ _ _ _ 9 factors factor NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 T T PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 B b ADJ JJ Degree=Pos _ _ _ _ 14 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 e.g. e.g. X FW _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kB kb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 AT AT PROPN NNP Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 STAT STAT PROPN NNP Number=Sing _ _ _ _ 26 families family NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 30 functional functional ADJ JJ Degree=Pos _ _ _ _ 31 importance importance NOUN NN Number=Sing _ _ _ _ 32 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 33 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 12353 # text = Several methods for specific down-regulation of transcription factors are shown that may be relevant to treatment of human disease. 1 Several several ADJ JJ Degree=Pos _ _ _ _ 2 methods method NOUN NNS Number=Plur _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 down down NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 regulation regulation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 14 may may AUX MD VerbForm=Fin _ _ _ _ 15 be be AUX VB VerbForm=Inf _ _ _ _ 16 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 treatment treatment NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 12354 # text = The data are discussed with regard to their potential clinical relevance for gastroenterology. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 discussed discuss VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 regard regard NOUN NN Number=Sing _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 9 potential potential ADJ JJ Degree=Pos _ _ _ _ 10 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 11 relevance relevance NOUN NN Number=Sing _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 gastroenterology gastroenterology NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12355 # text = Document 0030012957 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012957 0030012957 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12356 # text = E3, a hematopoietic-specific transcript directly regulated by the retinoic acid receptor alpha. 1 E3 E3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 specific specific ADJ JJ Degree=Pos _ _ _ _ 7 transcript transcript NOUN NN Number=Sing _ _ _ _ 8 directly directly ADV RB _ _ _ _ _ 9 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 13 acid acid ADJ JJ Degree=Pos _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12357 # text = Retinoic acid (RA)-induced maturation mediated by the retinoic acid receptor alpha (RAR alpha) has been implicated in myeloid development. 1 Retinoic Retinoic ADJ JJ Degree=Pos _ _ _ _ 2 acid acid NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 6 - - PUNCT : _ _ _ _ SpaceAfter=No 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 maturation maturation NOUN NN Number=Sing _ _ _ _ 9 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 13 acid acid ADJ JJ Degree=Pos _ _ _ _ 14 receptor receptor NOUN NN Number=Sing _ _ _ _ 15 alpha alpha NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 RAR Rar NOUN NN Number=Sing _ _ _ _ 18 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 22 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 25 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 12358 # text = We have used differential hybridization analysis of a cDNA library constructed from the murine RA-inducible MPRO promyelocyte cell line to identify immediate-early genes induced by RA during granulocytic differentiation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 differential differential ADJ JJ Degree=Pos _ _ _ _ 5 hybridization hybridization NOUN NN Number=Sing _ _ _ _ 6 analysis analysis NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 cDNA cDNA PROPN NNP Number=Sing _ _ _ _ 10 library library NOUN NN Number=Sing _ _ _ _ 11 constructed construct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 murine murine PROPN NNP Number=Sing _ _ _ _ 15 RA Ra PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 18 MPRO Mpro NOUN NN Number=Sing _ _ _ _ 19 promyelocyte promyelocyte NOUN NN Number=Sing _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 line line NOUN NN Number=Sing _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 identify identify VERB VB VerbForm=Inf _ _ _ _ 24 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 early early ADJ JJ Degree=Pos _ _ _ _ 27 genes gene NOUN NNS Number=Plur _ _ _ _ 28 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 RA RA PROPN NNP Number=Sing _ _ _ _ 31 during during ADP IN _ _ _ _ _ 32 granulocytic granulocytic ADJ JJ Degree=Pos _ _ _ _ 33 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 12359 # text = E3, one of nine sequences identified, was upregulated in an immediate-early manner, with transcript levels peaking after 60 minutes exposure to RA. 1 E3 E3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 one one NUM CD NumType=Card _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 nine nine NUM CD NumType=Card _ _ _ _ 6 sequences sequence NOUN NNS Number=Plur _ _ _ _ 7 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 upregulated upregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 -early -early ADJ JJ Degree=Pos _ _ _ _ 15 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 transcript transcript ADJ JJ Degree=Pos _ _ _ _ 19 levels level NOUN NNS Number=Plur _ _ _ _ 20 peaking peak VERB VBG VerbForm=Ger _ _ _ _ 21 after after ADP IN _ _ _ _ _ 22 60 60 NUM CD NumType=Card _ _ _ _ 23 minutes minute NOUN NNS Number=Plur _ _ _ _ 24 exposure exposure NOUN NN Number=Sing _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 RA. RA. PROPN NNP Number=Sing _ _ _ _ # sent_id = 12360 # text = E3 transcripts were RA-inducible in HL60 cells, but not in an RA-resistant subclone, HL60R, that harbors a mutated RAR alpha gene. 1 E3 E3 NUM CD NumType=Card _ _ _ _ 2 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 RA RA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 HL60 HL60 NUM CD NumType=Card _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 RA RA NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 resistant resistant NOUN NN Number=Sing _ _ _ _ 18 subclone subclone NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 HL60R Hl60r NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 23 harbors harbor VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 RAR Rar NOUN NN Number=Sing _ _ _ _ 27 alpha alpha ADP IN _ _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 12361 # text = However, when HL60R cells were transduced with a functional copy of the RAR alpha gene, RA induced a 10-fold increase in E3 mRNA levels. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 when when ADV WRB PronType=Int _ _ _ _ 4 HL60R Hl60r ADJ JJ Degree=Pos _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 transduced transduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 functional functional ADJ JJ Degree=Pos _ _ _ _ 11 copy copy NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 RAR RAR PROPN NNP Number=Sing _ _ _ _ 15 alpha alpha ADP IN _ _ _ _ _ 16 gene gene PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 RA RA PROPN NNP Number=Sing _ _ _ _ 19 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 fold fold NOUN NN Number=Sing _ _ _ _ 24 increase increase NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 E3 E3 NUM CD NumType=Card _ _ _ _ 27 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 28 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 12362 # text = E3 transcripts are present in the myeloid, B-lymphoid, and erythroid lineages, absent in nonhematopoietic cells, and encode a highly hydrophobic, potentially phosphorylated polypeptide of unknown function with significant homology to a putative protein expressed in myeloid cells. 1 E3 E3 NUM CD NumType=Card _ _ _ _ 2 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 present present ADJ JJ Degree=Pos _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 myeloid myeloid NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 lymphoid lymphoid NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 15 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 absent absent VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 nonhematopoietic nonhematopoietic ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 encode encode VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 highly highly ADV RB _ _ _ _ _ 26 hydrophobic hydrophobic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 potentially potentially ADV RB _ _ _ _ _ 29 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 polypeptide polypeptide NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 unknown unknown ADJ JJ Degree=Pos _ _ _ _ 33 function function NOUN NN Number=Sing _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 significant significant ADJ JJ Degree=Pos _ _ _ _ 36 homology homology NOUN NN Number=Sing _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 putative putative ADJ JJ Degree=Pos _ _ _ _ 40 protein protein NOUN NN Number=Sing _ _ _ _ 41 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 in in ADP IN _ _ _ _ _ 43 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 12363 # text = The murine E3 promoter harbors a single bipartite retinoic acid response element which in transient transfection assays conferred RA sensitivity. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 murine murine NOUN NN Number=Sing _ _ _ _ 3 E3 E3 NUM CD NumType=Card _ _ _ _ 4 promoter promoter NOUN NN Number=Sing _ _ _ _ 5 harbors harbor VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 single single ADJ JJ Degree=Pos _ _ _ _ 8 bipartite bipartite NOUN NN Number=Sing _ _ _ _ 9 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 10 acid acid ADJ JJ Degree=Pos _ _ _ _ 11 response response NOUN NN Number=Sing _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 transient transient ADJ JJ Degree=Pos _ _ _ _ 16 transfection transfection NOUN NN Number=Sing _ _ _ _ 17 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 conferred confer ADJ JJ Degree=Pos _ _ _ _ 19 RA Ra NOUN NN Number=Sing _ _ _ _ 20 sensitivity sensitivity NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 12364 # text = These results indicate that E3 is a hematopoietic-specific gene that is an immediate target for the activated RAR alpha during myelopoiesis. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 E3 E3 NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 specific specific ADJ JJ Degree=Pos _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 immediate immediate ADJ JJ Degree=Pos _ _ _ _ 16 target target NOUN NN Number=Sing _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 RAR Rar NOUN NN Number=Sing _ _ _ _ 21 alpha alpha NOUN NN Number=Sing _ _ _ _ 22 during during ADP IN _ _ _ _ _ 23 myelopoiesis myelopoiesis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12365 # text = Document 0030012963 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012963 0030012963 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12366 # text = Signaling through the lymphotoxin-beta receptor stimulates HIV-1 replication alone and in cooperation with soluble or membrane-bound TNF-alpha. 1 Signaling signal VERB VBG VerbForm=Ger _ _ _ _ 2 through through ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 lymphotoxin lymphotoxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 beta beta NOUN NN Number=Sing _ _ _ _ 7 receptor receptor NOUN NN Number=Sing _ _ _ _ 8 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 replication replication NOUN NN Number=Sing _ _ _ _ 13 alone alone ADV RB _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 cooperation cooperation NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 soluble soluble NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 membrane membrane NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 -bound -bound ADP IN _ _ _ _ _ 22 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12367 # text = The level of ongoing HIV-1 replication within an individual is critical to HIV-1 pathogenesis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 level level NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 ongoing ongoing ADJ JJ Degree=Pos _ _ _ _ 5 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 replication replication NOUN NN Number=Sing _ _ _ _ 9 within within ADP IN _ _ _ _ _ 10 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 individual individual NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 critical critical ADJ JJ Degree=Pos _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ _ 18 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 12368 # text = Among host immune factors, the cytokine TNF-alpha has previously been shown to increase HIV-1 replication in various monocyte and T cell model systems. 1 Among among ADV RB Degree=Pos _ _ _ _ 2 host host ADV RBS _ _ _ _ _ 3 immune immune ADJ JJ Degree=Pos _ _ _ _ 4 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 8 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT : _ _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 previously previously ADV RB _ _ _ _ _ 13 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 14 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 increase increase VERB VB VerbForm=Inf _ _ _ _ 17 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 replication replication NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 various various ADJ JJ Degree=Pos _ _ _ _ 23 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 T t PROPN NNP Number=Sing _ _ _ _ 26 cell cell VERB VB VerbForm=Inf _ _ _ _ 27 model model NOUN NN Number=Sing _ _ _ _ 28 systems system NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 12369 # text = Here, we demonstrate that signaling through the TNF receptor family member, the lymphotoxin-beta (LT-beta) receptor (LT-betaR), also regulates HIV-1 replication. 1 Here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 7 through through ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 TNF TNF PROPN NNP Number=Sing _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 family family NOUN NN Number=Sing _ _ _ _ 12 member member NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 lymphotoxin- lymphotoxin- SYM NFP _ _ _ _ SpaceAfter=No 16 beta beta NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 LT Lt NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 receptor receptor NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 LT LT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 betaR betaR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 also also ADV RB _ _ _ _ _ 30 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 31 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 12370 # text = Furthermore, HIV-1 replication is cooperatively stimulated when the distinct LT-betaR and TNF receptor systems are simultaneously engaged by their specific ligands. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 replication replication NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 cooperatively cooperatively ADV RB _ _ _ _ _ 9 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 when when ADV WRB PronType=Int _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 13 LT LT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 betaR betaR PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 TNF TNF SCONJ IN _ _ _ _ _ 18 receptor receptor NOUN NN Number=Sing _ _ _ _ 19 systems system NOUN NNS Number=Plur _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 simultaneously simultaneously ADV RB _ _ _ _ _ 22 engaged engage VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 25 specific specific ADJ JJ Degree=Pos _ _ _ _ 26 ligands ligand NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 12371 # text = Moreover, in a physiological coculture cellular assay system, we show that membrane-bound TNF-alpha and LT-alpha1beta2 act virtually identically to their soluble forms in the regulation of HIV-1 replication. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 physiological physiological ADJ JJ Degree=Pos _ _ _ _ 6 coculture coculture NOUN NN Number=Sing _ _ _ _ 7 cellular celular ADJ JJ Degree=Pos _ _ _ _ 8 assay assay NOUN NN Number=Sing _ _ _ _ 9 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 12 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 14 membrane membrane NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 bound bound ADJ JJ Degree=Pos _ _ _ _ 17 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 alpha alpha NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 LT-alpha1 LT-alpha1 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 beta2 beta2 NUM CD NumType=Card _ _ _ _ 23 act act NOUN NN Number=Sing _ _ _ _ 24 virtually virtually ADV RB _ _ _ _ _ 25 identically identically ADV RB _ _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 28 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 29 forms form NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 regulation regulation NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ _ 37 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 12372 # text = Thus, cosignaling via the LT-beta and TNF-alpha receptors is probably involved in the modulation of HIV-1 replication and the subsequent determination of HIV-1 viral burden in monocytes. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 cosignaling cosignal VERB VBG VerbForm=Ger _ _ _ _ 4 via via ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 LT- Lt- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 beta beta NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 receptors receptor NOUN NNS Number=Plur _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 probably probably ADV RB _ _ _ _ _ 15 involved involved ADJ JJ Degree=Pos _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 modulation modulation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 replication replication NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 subsequent subsequent ADJ JJ Degree=Pos _ _ _ _ 27 determination determination NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 viral viral ADJ JJ Degree=Pos _ _ _ _ 33 burden burden NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 12373 # text = Intriguingly, surface expression of LT-alpha1beta2 is up-regulated on a T cell line acutely infected with HIV-1, suggesting a positive feedback loop between HIV-1 infection, LT-alpha1beta2 expression, and HIV-1 replication. 1 Intriguingly Intriguingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 surface surface VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 LT- Lt- SYM SYM _ _ _ _ SpaceAfter=No 7 alpha1 alpha1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 beta2 beta2 NUM CD NumType=Card _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 up up ADV RB _ _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 line line NOUN NN Number=Sing _ _ _ _ 18 acutely acutely ADV RB _ _ _ _ _ 19 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 positive positive ADJ JJ Degree=Pos _ _ _ _ 28 feedback feedback NOUN NN Number=Sing _ _ _ _ 29 loop loop NOUN NN Number=Sing _ _ _ _ 30 between between ADP IN _ _ _ _ _ 31 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 LT- LT- SYM NFP _ _ _ _ SpaceAfter=No 37 alpha1 alpha1 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 beta2 beta2 NUM CD NumType=Card _ _ _ _ 39 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 1 1 NUM CD NumType=Card _ _ _ _ 45 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 12374 # text = Given the critical role that LT-alpha1beta2 plays in lymphoid architecture, we speculate that LT-alpha1beta2 may be involved in HIV-associated abnormalities of the lymphoid organs. 1 Given give VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 critical critical ADJ JJ Degree=Pos _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 LT-alpha1 LT-alpha1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 beta2 beta2 PART TO Abbr=Yes _ _ _ _ 8 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 11 architecture architecture NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 speculate speculate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 LT-alpha1 LT-alpha1 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 beta2 beta2 NOUN NN Number=Sing _ _ _ _ 18 may may AUX MD VerbForm=Fin _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 involved involved ADJ JJ Degree=Pos _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 HIV- HIV- SYM NFP _ _ _ _ SpaceAfter=No 23 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 abnormalities abnormality NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 28 organs organ NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12375 # text = Document 0030012967 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012967 0030012967 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12376 # text = Calcium/calmodulin-dependent protein kinase II downregulates both calcineurin and protein kinase C-mediated pathways for cytokine gene transcription in human T cells. 1 Calcium/calmodulin Calcium/calmodulin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 kinase kinase NOUN NN Number=Sing _ _ _ _ 6 II ii NUM CD NumType=Card _ _ _ _ 7 downregulates downregulate NOUN NNS Number=Plur _ _ _ _ 8 both both CCONJ CC _ _ _ _ _ 9 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 protein protein NOUN NN Number=Sing _ _ _ _ 12 kinase kinase NOUN NN Number=Sing _ _ _ _ 13 C- C- PUNCT : _ _ _ _ SpaceAfter=No 14 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 pathways pathway NOUN NNS Number=Plur _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 T T PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12377 # text = Engagement of the T cell receptor for antigen activates phospholipase C resulting in an increase in intracellular free calcium concentration ([Ca2+]i) and activation of protein kinase C (PKC). 1 Engagement engagement NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 T T PROPN NNP Number=Sing _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 receptor receptor NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 9 activates activate NOUN NNS Number=Plur _ _ _ _ 10 phospholipase phospholipase NOUN NN Number=Sing _ _ _ _ 11 C class PROPN NNP Number=Sing _ _ _ _ 12 resulting result VERB VBG VerbForm=Ger _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 increase increase NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 18 free free ADJ JJ Degree=Pos _ _ _ _ 19 calcium calcium NOUN NN Number=Sing _ _ _ _ 20 concentration concentration NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 + + SYM SYM _ _ _ _ SpaceAfter=No 25 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 i i PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 protein protein NOUN NN Number=Sing _ _ _ _ 32 kinase kinase NOUN NN Number=Sing _ _ _ _ 33 C C PROPN NNP Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 12378 # text = Increased [Ca2+]i activates Ca2+/calmodulin-dependent kinases including the multifunctional Ca2+/calmodulin-dependent protein kinase II (CaM-K II), as well as calcineurin, a type 2B protein phosphatase. 1 Increased increase PROPN NNP Number=Sing _ _ _ _ 2 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 3 Ca2 Ca2 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 + + SYM SYM _ _ _ _ SpaceAfter=No 5 ] ] PUNCT -RRB- _ _ _ _ SpaceAfter=No 6 i i PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 Ca2+/calmodulin Ca2+/calmodulin ADP IN _ _ _ _ SpaceAfter=No 9 -dependent -dependent ADJ JJ Degree=Pos _ _ _ _ 10 kinases kinase NOUN NNS Number=Plur _ _ _ _ 11 including include VERB VBG VerbForm=Ger _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 multifunctional multifunctional ADJ JJ Degree=Pos _ _ _ _ 14 Ca2+/calmodulin Ca2+/calmodulin NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 kinase kinase NOUN NN Number=Sing _ _ _ _ 19 II ii NUM CD NumType=Card _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 CaM Cam NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 K k NUM CD NumType=Card _ _ _ _ 24 II ii NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 as as ADV RB _ _ _ _ _ 28 well well ADV RB Degree=Pos _ _ _ _ 29 as as ADP IN _ _ _ _ _ 30 calcineurin calcineurin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 type type NOUN NN Number=Sing _ _ _ _ 34 2B 2b NOUN NN Number=Sing _ _ _ _ 35 protein protein NOUN NN Number=Sing _ _ _ _ 36 phosphatase phosphatase NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 12379 # text = Recent studies have identified calcineurin as a key enzyme for interleukin (IL)-2 and IL-4 promoter activation. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 6 as as ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 key key ADJ JJ Degree=Pos _ _ _ _ 9 enzyme enzyme NOUN NN Number=Sing _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 4 4 NUM CD NumType=Card _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 12380 # text = However, the role of CaM-K II remains unknown. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 CaM CaM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 K K PROPN NNP Number=Sing _ _ _ _ 9 II II PROPN NNP Number=Sing _ _ _ _ 10 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 12381 # text = We have used mutants of these kinases and phosphatases (gamma B*CaM-K and delta CaM-AI, respectively) to explore their relative role in cytokine gene transcription and their interactions with PKC-dependent signaling systems. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 mutants mutant NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 kinases kinase NOUN NNS Number=Plur _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 phosphatases phosphatase NOUN NNS Number=Plur _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 gamma gamma NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 * * PUNCT NFP _ _ _ _ SpaceAfter=No 14 CaM CaM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 K K PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 delta delta PROPN NNP Number=Sing _ _ _ _ 19 CaM CaM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 AI ai PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 to to PART TO _ _ _ _ _ 26 explore explore VERB VB VerbForm=Inf _ _ _ _ 27 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 28 relative relative ADJ JJ Degree=Pos _ _ _ _ 29 role role NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 32 gene gene NOUN NN Number=Sing _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 36 interactions interaction NOUN NNS Number=Plur _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 41 signaling signaling NOUN NN Number=Sing _ _ _ _ 42 systems system NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 12382 # text = gamma B*CaM-K and delta CaM-AI, known to exhibit constitutive Ca(2+)-independent activity, were cotransfected (alone or in combination) in Jurkat T cells with a plasmid containing the intact IL-2 promoter driving the expression of the chloramphenicol acetyltransferase reporter gene. 1 gamma gamma NOUN NN Number=Sing _ _ _ _ 2 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 * * PUNCT NFP _ _ _ _ SpaceAfter=No 4 CaM CaM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 K K PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 delta delta PROPN NNP Number=Sing _ _ _ _ 9 CaM CaM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 AI ai PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 exhibit exhibit NOUN NN Number=Sing _ _ _ _ 16 constitutive constitutive NOUN NN Number=Sing _ _ _ _ 17 Ca ca PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 +) +) SYM NFP _ _ _ _ SpaceAfter=No 21 - - SYM SYM _ _ _ _ SpaceAfter=No 22 independent independent ADJ JJ Degree=Pos _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 cotransfected cotransfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 alone alone ADJ JJ Degree=Pos _ _ _ _ 29 or or CCONJ CC _ _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 combination combination NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 35 T t PROPN NNP Number=Sing _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 40 containing contain VERB VBG VerbForm=Ger _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 intact intact NOUN NN Number=Sing _ _ _ _ 43 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 2 2 NUM CD NumType=Card _ _ _ _ 46 promoter promoter NOUN NN Number=Sing _ _ _ _ 47 driving drive VERB VBG VerbForm=Ger _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 expression expression NOUN NN Number=Sing _ _ _ _ 50 of of ADP IN _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 53 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 54 reporter reporter NOUN NN Number=Sing _ _ _ _ 55 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 . . PUNCT . _ _ _ _ _ # sent_id = 12383 # text = Cotransfection of gamma B*CaM-K with the IL-2 promoter construct downregulated its transcription in response to stimulation with ionomycin and phorbol myristate acetate (PMA). 1 Cotransfection Cotransfection NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 gamma gamma NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 * * PUNCT NFP _ _ _ _ SpaceAfter=No 6 CaM CaM NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 K K NUM CD NumType=Card _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 construct construct NOUN NN Number=Sing _ _ _ _ 16 downregulated downregulate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 response response NOUN NN Number=Sing _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 ionomycin ionomycin NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 27 myristate myristate NOUN NN Number=Sing _ _ _ _ 28 acetate acetate NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 12384 # text = The inhibitory effect of CaM-K II on IL-2 promoter was associated with decreased transcription of its AP-1 and NF-AT transactivating pathways. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 3 effect effect NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 CaM CaM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 K K NUM CD NumType=Card _ _ _ _ 8 II II NUM CD NumType=Card _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 21 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 1 1 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 AT at SCONJ IN _ _ _ _ _ 28 transactivating transactivating VERB VBG VerbForm=Ger _ _ _ _ 29 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 12385 # text = Under the same conditions, delta CaM-AI superinduced IL-2 promoter activity (approximately twofold increase). 1 Under under ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 same same ADJ JJ Degree=Pos _ _ _ _ 4 conditions condition NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 delta delta PROPN NNP Number=Sing _ _ _ _ 7 CaM CaM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 AI be PROPN NNP Number=Sing _ _ _ _ 10 superinduced superinduce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 approximately approximately ADV RB _ _ _ _ _ 18 twofold twofold ADJ JJ Degree=Pos _ _ _ _ 19 increase increase NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 12386 # text = When both mutants were used in combination, gamma B*CaM-K inhibited the induction of the IL-2 promoter by delta CaM-AI. 1 When when ADV WRB PronType=Int _ _ _ _ 2 both both DET DT _ _ _ _ _ 3 mutants mutant NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 combination combination NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 gamma gamma NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 * * PUNCT NFP _ _ _ _ SpaceAfter=No 12 CaM Cam NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 K K NUM CD NumType=Card _ _ _ _ 15 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 induction induction NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 delta delta PROPN NNP Number=Sing _ _ _ _ 26 CaM CaM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 AI ai PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 12387 # text = Similar results were obtained when a construct containing the IL-4 promoter also was used. 1 Similar similar ADJ JJ Degree=Pos _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 obtained obtain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 when when ADV WRB PronType=Int _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 construct construct NOUN NN Number=Sing _ _ _ _ 8 containing contain VERB VBG VerbForm=Ger _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 4 4 NUM CD NumType=Card _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 12388 # text = gamma B*CaM-K also downregulated the activation of AP-1 in response to transfection with a constitutively active mutant of PKC or stimulation with PMA. 1 gamma gamma NOUN NN Number=Sing _ _ _ _ 2 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 * * PUNCT NFP _ _ _ _ SpaceAfter=No 4 CaM CaM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 K K PROPN NNP Number=Sing _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 downregulated downregulate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 response response NOUN NN Number=Sing _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 transfection transfection VERB VB VerbForm=Inf _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 constitutively constitutively ADV RB _ _ _ _ _ 22 active active ADJ JJ Degree=Pos _ _ _ _ 23 mutant mutant NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 PKC Pkc NOUN NN Number=Sing _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 12389 # text = These results suggest that CaM-K II may exert negative influences on cytokine gene transcription in human T cells, and provide preliminary evidence for negative cross-talk with the calcineurin- and PKC- dependent signaling systems. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 CaM CaM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 K K NUM CD NumType=Card _ _ _ _ 8 II II NUM CD NumType=Card _ _ _ _ 9 may may AUX MD VerbForm=Fin _ _ _ _ 10 exert exert VERB VB VerbForm=Inf _ _ _ _ 11 negative negative ADJ JJ Degree=Pos _ _ _ _ 12 influences influence NOUN NNS Number=Plur _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 T t PROPN NNP Number=Sing _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 provide provide VERB VB VerbForm=Inf _ _ _ _ 24 preliminary preliminary ADJ JJ Degree=Pos _ _ _ _ 25 evidence evidence NOUN NN Number=Sing _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 negative negative ADJ JJ Degree=Pos _ _ _ _ 28 cross-talk cross-talk NOUN NN Number=Sing _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT , _ _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 PKC Pkc NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ _ 36 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 37 signaling signaling NOUN NN Number=Sing _ _ _ _ 38 systems system NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12390 # text = Document 0030012969 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012969 0030012969 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12391 # text = HIV does not replicate in naive CD4 T cells stimulated with CD3/CD28. 1 HIV HIV NOUN NN Number=Sing _ _ _ _ 2 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 not not PART RB _ _ _ _ _ 4 replicate replicate VERB VB VerbForm=Inf _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 naive naive ADJ JJ Degree=Pos _ _ _ _ 7 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 CD3/CD28 CD3/CD28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12392 # text = In this report, we demonstrate that the T cell tropic strain of HIV, LAI, does not replicate in naive CD4 T cells stimulated by cross-linking CD3 and CD28. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 T T PROPN NNP Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 tropic tropic ADJ JJ Degree=Pos _ _ _ _ 12 strain strain NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 LAI LAI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 replicate replicate VERB VB VerbForm=Inf _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 naive naive ADJ JJ Degree=Pos _ _ _ _ 23 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 by by SCONJ IN _ _ _ _ _ 28 cross-linking cross-link VERB VBG VerbForm=Ger _ _ _ _ 29 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 CD28 CD28 NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 12393 # text = In contrast, LAI replicates well in memory CD4 T cells stimulated in the same way. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 LAI LAI PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 5 replicates replicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 well well ADV RB Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 memory memory NOUN NN Number=Sing _ _ _ _ 9 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 same same ADJ JJ Degree=Pos _ _ _ _ 16 way way NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 12394 # text = Unlike this physiologically relevant stimulation, PHA stimulates productive LAI replication in both naive and memory T cells. 1 Unlike unlike ADP IN _ _ _ _ _ 2 this this PRON DT Number=Sing|PronType=Dem _ _ _ _ 3 physiologically physiologically ADV RB _ _ _ _ _ 4 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 5 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 PHA PHA PROPN NNP Number=Sing _ _ _ _ 8 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 productive productive ADJ JJ Degree=Pos _ _ _ _ 10 LAI Lai NOUN NN Number=Sing _ _ _ _ 11 replication replication NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 both both CCONJ CC _ _ _ _ _ 14 naive naive ADJ JJ Degree=Pos _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 memory memory ADJ JJ Degree=Pos _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 12395 # text = These studies were conducted with highly purified (FACS-isolated) subsets of CD4 T cells identified by expression of both CD45RA and CD62L. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 conducted conduct VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 highly highly ADV RB _ _ _ _ _ 7 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 FACS Fac NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 subsets subset NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 16 T T PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 identified identify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 both both CCONJ CC _ _ _ _ _ 23 CD45RA CD45RA PROPN NNP Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 CD62L CD62L PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 12396 # text = Remixing of purified T cells showed that naive T cells do not suppress LAI replication in memory T cells and that memory T cells do not restore LAI expression in naive T cells. 1 Remixing Remixing VERB VBG VerbForm=Ger _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 T T PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 naive naive ADJ JJ Degree=Pos _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 14 LAI Lai ADJ JJ Degree=Pos _ _ _ _ 15 replication replication NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 memory memory NOUN NN Number=Sing _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 memory memory NOUN NN Number=Sing _ _ _ _ 23 T t NOUN NN Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 not not PART RB _ _ _ _ _ 27 restore restore VERB VB VerbForm=Inf _ _ _ _ 28 LAI Lai PROPN NNP Number=Sing _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 naive naive ADJ JJ Degree=Pos _ _ _ _ 32 T t PROPN NNP Number=Sing _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 12397 # text = The suppression of productive LAI replication in naive T cells is not due to differential expression of viral coreceptors, nor is it due to inhibition of activation of the important HIV transcription factors, nuclear factor-kappaB and activator protein-1. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 suppression suppression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 productive productive ADJ JJ Degree=Pos _ _ _ _ 5 LAI LAI PROPN NNP Number=Sing _ _ _ _ 6 replication replication NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 naive naive ADJ JJ Degree=Pos _ _ _ _ 9 T t PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 due due ADJ JJ Degree=Pos _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 differential differential ADJ JJ Degree=Pos _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 viral viral ADJ JJ Degree=Pos _ _ _ _ 19 coreceptors coreceptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 nor nor CCONJ CC _ _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 24 due due ADP IN _ _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 important important ADJ JJ Degree=Pos _ _ _ _ 32 HIV Hiv NOUN NN Number=Sing _ _ _ _ 33 transcription transcription NOUN NN Number=Sing _ _ _ _ 34 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 37 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 kappaB kappab NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 activator activator NOUN NN Number=Sing _ _ _ _ 42 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 12398 # text = The inherent resistance of naive T cells to productive HIV infection, coupled with their proliferative advantage as demonstrated here, provides a sound basis for proposed clinical therapies using ex vivo expansion and reinfusion of CD4 T cells from HIV-infected adults. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 inherent inherent ADJ JJ Degree=Pos _ _ _ _ 3 resistance resistance NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 naive naive ADJ JJ Degree=Pos _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 productive productive VERB VB VerbForm=Inf _ _ _ _ 10 HIV HIV PROPN NNP Number=Sing _ _ _ _ 11 infection infection NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 coupled couple VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 17 advantage advantage NOUN NN Number=Sing _ _ _ _ 18 as as SCONJ IN _ _ _ _ _ 19 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 here here ADV RB PronType=Dem _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 sound sound NOUN NN Number=Sing _ _ _ _ 25 basis basis NOUN NN Number=Sing _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 proposed propose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 clinical clinical ADJ JJ Degree=Pos _ _ _ _ 29 therapies therapy NOUN NNS Number=Plur _ _ _ _ 30 using use VERB VBG VerbForm=Ger _ _ _ _ 31 ex ex ADJ JJ Degree=Pos _ _ _ _ 32 vivo vivo NOUN NN Number=Sing _ _ _ _ 33 expansion expansion NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 reinfusion reinfusion NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 CD4 CD4 PROPN NNP Number=Sing _ _ _ _ 38 T t PROPN NNP Number=Sing _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ _ 40 from from ADP IN _ _ _ _ _ 41 HIV- HIV- NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 adults adult NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12399 # text = Document 0030012972 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012972 0030012972 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12400 # text = Activation of the signal transducer and transcription (STAT) signaling pathway in a primary T cell response. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 signal signal NOUN NN Number=Sing _ _ _ _ 5 transducer transducer NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 STAT Stat NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 12 pathway pathway NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 primary primary ADJ JJ Degree=Pos _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 12401 # text = Critical role for IL-6. 1 Critical critical ADJ JJ Degree=Pos _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12402 # text = The T cell activation is initiated by interaction of specific Ags with TCR, followed by activation of intracellular biochemical events leading to activation of several genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 T T PROPN NNP Number=Sing _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 initiated initiate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 interaction interaction NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 specific specific ADJ JJ Degree=Pos _ _ _ _ 11 Ags ag NOUN NNS Number=Plur _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 TCR Tcr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 followed follow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 20 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 21 events event NOUN NNS Number=Plur _ _ _ _ 22 leading lead VERB VBG VerbForm=Ger _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 activation activation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 several several ADJ JJ Degree=Pos _ _ _ _ 27 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 12403 # text = The activation of signal transducer and activator of transcription (STAT) proteins in a primary TCR-mediated activation of T cells have been explored. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 signal signal NOUN NN Number=Sing _ _ _ _ 5 transducer transducer NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 activator activator NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 STAT STAT NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 proteins protein NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 primary primary ADJ JJ Degree=Pos _ _ _ _ 17 TCR Tcr NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 26 explored explore VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 12404 # text = In purified human peripheral blood T cells, nuclear 1 In in ADP IN _ _ _ _ _ 2 purified purified ADJ JJ Degree=Pos _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 5 blood blood NOUN NN Number=Sing _ _ _ _ 6 T t PROPN NNP Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ # sent_id = 12405 # text = STAT proteins were activated approximately 3 h after activation by cross-linked anti-CD3 1 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 2 proteins protein NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 approximately approximately ADV RB _ _ _ _ _ 6 3 3 NUM CD NumType=Card _ _ _ _ 7 h h NOUN NN Number=Sing _ _ _ _ 8 after after ADP IN _ _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 -linked -link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 anti-CD3 anti-CD3 X ADD _ _ _ _ _ # sent_id = 12406 # text = Abs. 1 Abs Ab NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 . . PUNCT . _ _ _ _ _ # sent_id = 12407 # text = These STAT proteins were detected by using the IFN-gamma-activated sequence (GAS) and related oligonucleotides as probes in electrophoretic mobility shift assay. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 3 proteins protein NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 by by SCONJ IN _ _ _ _ _ 7 using use VERB VBG VerbForm=Ger _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 IFN- Ifn- NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 sequence sequence NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 GAS gas PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 related related ADJ JJ Degree=Pos _ _ _ _ 19 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ _ 20 as as ADP IN _ _ _ _ _ 21 probes probe NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 24 mobility mobility NOUN NN Number=Sing _ _ _ _ 25 shift shift NOUN NN Number=Sing _ _ _ _ 26 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 12408 # text = Analysis of the nuclear extracts with anti-STAT Abs indicated that they contained STAT-3 and additional proteins crossreactive with the STAT family. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 extracts extract NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 anti-STAT anti-stat ADJ JJ Degree=Pos _ _ _ _ 8 Abs Abs NOUN NNS Number=Plur _ _ _ _ 9 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 12 contained contain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 STAT STAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 3 3 NUM CD NumType=Card _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 additional additional ADJ JJ Degree=Pos _ _ _ _ 18 proteins protein NOUN NNS Number=Plur _ _ _ _ 19 crossreactive crossreactive ADJ JJ Degree=Pos _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 23 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 12409 # text = The induction of STAT activity was inhibited completely by pretreatment with either cycloheximide or cyclosporin A, thus indicating that the induction was due to a secondary factor produced by the activated T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 completely completely ADV RB _ _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 pretreatment pretreatment NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 either either CCONJ CC _ _ _ _ _ 13 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 16 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 thus thus ADV RB _ _ _ _ _ 19 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 induction induction NOUN NN Number=Sing _ _ _ _ 23 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 24 due due ADP IN _ _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 secondary secondary ADJ JJ Degree=Pos _ _ _ _ 28 factor factor NOUN NN Number=Sing _ _ _ _ 29 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 T t PROPN NNP Number=Sing _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 12410 # text = As neutralizing anti-IL-6 1 As as SCONJ IN _ _ _ _ _ 2 neutralizing neutralize VERB VBG VerbForm=Ger _ _ _ _ 3 anti-IL anti-IL ADV RB _ _ _ _ SpaceAfter=No 4 - - SYM SYM _ _ _ _ SpaceAfter=No 5 6 6 NUM CD NumType=Card _ _ _ _ # sent_id = 12411 # text = Abs effectively down-regulated the early induction of STAT proteins and as exogenously added IL-6 rapidly activated DNA binding similar to TCR-mediated bindings, it can be concluded that IL-6 is the factor responsible for the activation of STAT proteins in a primary T cell response. 1 Abs Ab ADV RB _ _ _ _ _ 2 effectively effectively ADV RB _ _ _ _ _ 3 down down ADV RB _ _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 early early ADJ JJ Degree=Pos _ _ _ _ 8 induction induction NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 as as SCONJ IN _ _ _ _ _ 14 exogenously exogenously ADV RB _ _ _ _ _ 15 added add VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 IL il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - SYM SYM _ _ _ _ SpaceAfter=No 18 6 6 NUM CD NumType=Card _ _ _ _ 19 rapidly rapidly ADV RB _ _ _ _ _ 20 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 DNA dna NOUN NN Number=Sing _ _ _ _ 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 similar similar ADJ JJ Degree=Pos _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 bindings bindings NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 31 can can AUX MD VerbForm=Fin _ _ _ _ 32 be be AUX VB VerbForm=Inf _ _ _ _ 33 concluded conclude VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 34 that that SCONJ IN _ _ _ _ _ 35 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - SYM SYM _ _ _ _ SpaceAfter=No 37 6 6 NUM CD NumType=Card _ _ _ _ 38 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 factor factor NOUN NN Number=Sing _ _ _ _ 41 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 42 for for ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 activation activation NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 STAT Stat ADJ JJ Degree=Pos _ _ _ _ 47 proteins protein NOUN NNS Number=Plur _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 50 primary primary ADJ JJ Degree=Pos _ _ _ _ 51 T t PROPN NNP Number=Sing _ _ _ _ 52 cell cell NOUN NN Number=Sing _ _ _ _ 53 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12412 # text = Document 0030012974 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012974 0030012974 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12413 # text = Reversible differentiation of human monoblastic leukemia U937 cells by ML-9, an inhibitor of myosin light chain kinase. 1 Reversible Reversible ADJ JJ Degree=Pos _ _ _ _ 2 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 monoblastic monoblastic ADJ JJ Degree=Pos _ _ _ _ 6 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 7 U937 U937 NUM CD NumType=Card _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 ML ML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 myosin myosin NOUN NN Number=Sing _ _ _ _ 18 light light NOUN NN Number=Sing _ _ _ _ 19 chain chain NOUN NN Number=Sing _ _ _ _ 20 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12414 # text = Human monoblastic leukemia U937 cells are induced to differentiate into monocytes and macrophages by various agents. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 monoblastic monoblastic ADJ JJ Degree=Pos _ _ _ _ 3 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 4 U937 U937 NUM CD NumType=Card _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 differentiate differentiate VERB VB VerbForm=Inf _ _ _ _ 10 into into ADP IN _ _ _ _ _ 11 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 various various ADJ JJ Degree=Pos _ _ _ _ 16 agents agent NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 12415 # text = We have shown that 1-(5-chloronaphthalene-1-sulfonyl)-1H-hexahydro-1,4-diazepine hydrochloride (ML-9), an inhibitor of myosin light chain kinase, induces differentiation of monocytoid leukemia cell lines U937 and THP-1 but not of myeloblastic leukemic ML-1 cell or erythroleukemia K562 cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 1-( 1-( SYM NFP _ _ _ _ SpaceAfter=No 6 5-chloronaphthalene 5-chloronaphthalene NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 -sulfonyl -sulfonyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 -1H-hexahydro -1H-hexahydro NUM CD NumType=Card _ _ _ SpaceAfter=No 12 -1,4-diazepine -1,4-diazepine NOUN NN Number=Sing _ _ _ _ 13 hydrochloride hydrochloride NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 ML Ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 myosin myosin NOUN NN Number=Sing _ _ _ _ 24 light light NOUN NN Number=Sing _ _ _ _ 25 chain chain NOUN NN Number=Sing _ _ _ _ 26 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 induces induce NOUN NNS Number=Plur _ _ _ _ 29 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 monocytoid monocytoid ADJ JJ Degree=Pos _ _ _ _ 32 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 33 cell cell NOUN NN Number=Sing _ _ _ _ 34 lines line NOUN NNS Number=Plur _ _ _ _ 35 U937 U937 NUM CD NumType=Card _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ _ 40 but but CCONJ CC _ _ _ _ _ 41 not not PART RB _ _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 myeloblastic myeloblastic ADJ JJ Degree=Pos _ _ _ _ 44 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 45 ML Ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ _ 48 cell cell NOUN NN Number=Sing _ _ _ _ 49 or or CCONJ CC _ _ _ _ _ 50 erythroleukemia erythroleukemion NOUN NN Number=Sing _ _ _ _ 51 K562 K562 NUM CD NumType=Card _ _ _ _ 52 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 12416 # text = In the present study, we further analyzed the effect of ML-9 in comparison with that of 1 alpha, 25-dihydroxyvitamin D3 (VD3) a typical inducer of monocytic differentiation. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 further further ADV RB _ _ _ _ _ 8 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 effect effect NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 ML ML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 9 9 NUM CD NumType=Card _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 comparison comparison NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 1 1 NUM CD NumType=Card _ _ _ _ 21 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 25 25 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 dihydroxyvitamin dihydroxyvitamin NOUN NN Number=Sing _ _ _ _ 26 D3 D3 NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 VD3 VD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 typical typical ADJ JJ Degree=Pos _ _ _ _ 32 inducer inducer NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 35 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 12417 # text = ML-9 induced nitroblue tetrazolium (NBT)-reducing activity of U937 cell more rapidly than VD3: 1 ML Ml INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 9 9 NUM CD NumType=Card _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 nitroblue nitroblue ADJ JJ Degree=Pos _ _ _ _ 6 tetrazolium tetrazolium NOUN NN Number=Sing _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 NBT NBT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 reducing reduce VERB VBG VerbForm=Ger _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 U937 U937 NUM CD NumType=Card _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 more more ADV RBR _ _ _ _ _ 17 rapidly rapidly ADV RB _ _ _ _ _ 18 than than ADP IN _ _ _ _ _ 19 VD3 VD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 : : PUNCT : _ _ _ _ _ # sent_id = 12418 # text = This differentiation marker was induced significantly after incubation with ML-9 and VD3 for 4 hours and 1 day, respectively. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 3 marker marker NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 significantly significantly ADV RB _ _ _ _ _ 7 after after ADP IN _ _ _ _ _ 8 incubation incubation NOUN NN Number=Sing _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 ML ML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 9 9 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 VD3 VD3 NUM CD NumType=Card _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 4 4 NUM CD NumType=Card _ _ _ _ 17 hours hour NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 1 1 NUM CD NumType=Card _ _ _ _ 20 day day NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 12419 # text = ML-9 also induced alpha-naphthyl acetate esterase (ANAE) activity, another monocytic differentiation marker, more rapidly than VD3. 1 ML Ml SYM $ _ _ _ _ SpaceAfter=No 2 - - SYM SYM _ _ _ _ SpaceAfter=No 3 9 9 NUM CD NumType=Card _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 naphthyl naphthyl NOUN NN Number=Sing _ _ _ _ 9 acetate acetate NOUN NN Number=Sing _ _ _ _ 10 esterase esterase NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 ANAE ANAE PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 another another DET DT _ _ _ _ _ 17 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 18 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 19 marker marker NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 more more ADV RBR _ _ _ _ _ 22 rapidly rapidly ADV RB _ _ _ _ _ 23 than than ADP IN _ _ _ _ _ 24 VD3 VD3 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 12420 # text = The maximum levels of these markers induced by ML-9 were comparable to those induced by VD3, but after removal of ML-9 from the medium by washing the cells, the expressions of theses markers decreased within 4 hours and reached basal levels in 1 day, indicating that ML-9's induction of expression of differentiation-associated phenotypes was reversible. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 maximum maximum ADJ JJ Degree=Pos _ _ _ _ 3 levels level NOUN NNS Number=Plur _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 markers marker NOUN NNS Number=Plur _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 ML ML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 9 9 NUM CD NumType=Card _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 comparable comparable ADJ JJ Degree=Pos _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 16 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 VD3 VD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 after after ADP IN _ _ _ _ _ 22 removal removal NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 ML ML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 9 9 NUM CD NumType=Card _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 medium medium NOUN NN Number=Sing _ _ _ _ 30 by by SCONJ IN _ _ _ _ _ 31 washing wash VERB VBG VerbForm=Ger _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 expressions expression NOUN NNS Number=Plur _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 these these DET DT Number=Plur|PronType=Dem _ _ _ SpaceAfter=No 39 s 's PART POS _ _ _ _ _ 40 markers marker NOUN NNS Number=Plur _ _ _ _ 41 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 within within ADP IN _ _ _ _ _ 43 4 4 NUM CD NumType=Card _ _ _ _ 44 hours hour NOUN NNS Number=Plur _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 reached reach VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 47 basal basal ADJ JJ Degree=Pos _ _ _ _ 48 levels level NOUN NNS Number=Plur _ _ _ _ 49 in in ADP IN _ _ _ _ _ 50 1 1 NUM CD NumType=Card _ _ _ _ 51 day day NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 54 that that SCONJ IN _ _ _ _ _ 55 ML ML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 56 - - SYM SYM _ _ _ _ SpaceAfter=No 57 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 58 's 's PART POS _ _ _ _ _ 59 induction induction NOUN NN Number=Sing _ _ _ _ 60 of of ADP IN _ _ _ _ _ 61 expression expression NOUN NN Number=Sing _ _ _ _ 62 of of ADP IN _ _ _ _ _ 63 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 64 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 65 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 66 phenotypes phenotype NOUN NNS Number=Plur _ _ _ _ 67 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 68 reversible reversible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 69 . . PUNCT . _ _ _ _ _ # sent_id = 12421 # text = The growth inhibition of U937 cells by ML-9 was also reversible. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 growth growth NOUN NN Number=Sing _ _ _ _ 3 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 U937 U937 NUM CD NumType=Card _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 ML ML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 9 9 NUM CD NumType=Card _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 also also ADV RB _ _ _ _ _ 13 reversible reversible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 12422 # text = Similar effects were observed in another line of human monoblastic cells, THP-1. ML-9 had little or no effect on the morphology of U937 cells but increased the expression of monocyte-macrophage lineage-associated surface antigen, CD14, to some extent. 1 Similar similar ADJ JJ Degree=Pos _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 another another DET DT _ _ _ _ _ 7 line line NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 monoblastic monoblastic ADJ JJ Degree=Pos _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ 17 ML Ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 9 9 NUM CD NumType=Card _ _ _ _ 20 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 little little ADJ JJ Degree=Pos _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 no no DET DT _ _ _ _ _ 24 effect effect NOUN NN Number=Sing _ _ _ _ 25 on on ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 morphology morphology NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 U937 U937 NUM CD NumType=Card _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 but but CCONJ CC _ _ _ _ _ 32 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 expression expression NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 monocyte monocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 39 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 surface surface NOUN NN Number=Sing _ _ _ _ 43 antigen antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 CD14 CD14 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 , , PUNCT , _ _ _ _ _ 47 to to ADP IN _ _ _ _ _ 48 some some DET DT _ _ _ _ _ 49 extent extent NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 12423 # text = Irreversible terminal differentiation induced by VD3 is associated with down regulation of the expression of c-myc and upregulation of the expression of c-fos and c-jun, but ML-9 did not affect the expression of these oncogenes appreciably. 1 Irreversible Irreversible ADJ JJ Degree=Pos _ _ _ _ 2 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 3 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 VD3 VD3 NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 down down NOUN NN Number=Sing _ _ _ _ 11 regulation regulation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 c- c- SYM NFP _ _ _ _ SpaceAfter=No 17 myc myc NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 upregulation upregulation NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 expression expression NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 fos fo NOUN NNS Number=Plur _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 c- c- SYM NFP _ _ _ _ SpaceAfter=No 29 jun jun NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 but but CCONJ CC _ _ _ _ _ 32 ML ML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 9 9 NUM CD NumType=Card _ _ _ _ 35 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 36 not not PART RB _ _ _ _ _ 37 affect affect VERB VB VerbForm=Inf _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 expression expression NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 42 oncogenes oncogene NOUN NNS Number=Plur _ _ _ _ 43 appreciably appreciably ADV RB _ _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 12424 # text = ML-9-induced differentiation was also reversible when the cells were cultured with cultured with ML-9 plus an anti-cancer drug such as 1-beta-D-arabino-furanosylcytosine or daunomycin. 1 ML Ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 9 9 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 -induced -induced ADJ JJ Degree=Pos _ _ _ _ 5 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 reversible reversible ADJ JJ Degree=Pos _ _ _ _ 9 when when ADV WRB PronType=Int _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 cultured culture VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 cultured culture VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 ML ML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 9 9 NUM CD NumType=Card _ _ _ _ 20 plus plus CCONJ CC _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 anti-cancer anti-cancer ADJ JJ Degree=Pos _ _ _ _ 23 drug drug NOUN NN Number=Sing _ _ _ _ 24 such such ADJ JJ Degree=Pos _ _ _ _ 25 as as ADP IN _ _ _ _ _ 26 1-beta 1-beta ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 -D- -D- NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 arabino arabino NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 furanosylcytosine furanosylcytosine NOUN NN Number=Sing _ _ _ _ 31 or or CCONJ CC _ _ _ _ _ 32 daunomycin daunomycin NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 12425 # text = it became irreversible, however, upon simultaneous treatment with dexamethasone and transforming growth factor-beta 1 (TGF-beta 1), which did not induce differentiation of U937 cells but caused growth arrest of the cells in the G0/G1 phase of the cell cycle. 1 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 became become VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 irreversible irreversible ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 however however ADV RB _ _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 upon upon ADP IN _ _ _ _ _ 8 simultaneous simultaneous ADJ JJ Degree=Pos _ _ _ _ 9 treatment treatment NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 transforming transform VERB VBG VerbForm=Ger _ _ _ _ 14 growth growth NOUN NN Number=Sing _ _ _ _ 15 factor-beta factor-beta NOUN NN Number=Sing _ _ _ _ 16 1 1 NUM CD NumType=Card _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 TGF Tgf NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 beta beta NOUN NN Number=Sing _ _ _ _ 21 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 26 not not PART RB _ _ _ _ _ 27 induce induce VERB VB VerbForm=Inf _ _ _ _ 28 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 U937 U937 NUM CD NumType=Card _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 but but CCONJ CC _ _ _ _ _ 33 caused cause VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 growth growth NOUN NN Number=Sing _ _ _ _ 35 arrest arrest NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 G0/G1 G0/G1 PROPN NNP Number=Sing _ _ _ _ 42 phase phase NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 cell cell NOUN NN Number=Sing _ _ _ _ 46 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ _ # sent_id = 12426 # text = These results suggest that ML-9 should be useful for studying the mechanisms of monocytic differentiation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 ML ML PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 9 9 NUM CD NumType=Card _ _ _ _ 8 should should AUX MD VerbForm=Fin _ _ _ _ 9 be be AUX VB VerbForm=Inf _ _ _ _ 10 useful useful ADJ JJ Degree=Pos _ _ _ _ 11 for for SCONJ IN _ _ _ _ _ 12 studying study VERB VBG VerbForm=Ger _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 17 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12427 # text = Document 0030012976 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012976 0030012976 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12428 # text = GATA-1 and erythropoietin cooperate to promote erythroid cell survival by regulating bcl-xL expression. 1 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 erythropoietin erythropoietin NOUN NN Number=Sing _ _ _ _ 6 cooperate cooperate VERB VB VerbForm=Inf _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 promote promote VERB VB VerbForm=Inf _ _ _ _ 9 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 survival survival NOUN NN Number=Sing _ _ _ _ 12 by by SCONJ IN _ _ _ _ _ 13 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 14 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 xL xl NOUN NN Number=Sing _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12429 # text = The transcription factor GATA-1 is essential for normal erythropoiesis. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 GATA GATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 1 1 NUM CD NumType=Card _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 essential essential ADJ JJ Degree=Pos _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 normal normal ADJ JJ Degree=Pos _ _ _ _ 11 erythropoiesis erythropoiesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 12430 # text = By examining in vitro-differentiated embryonic stem cells, we showed previously that in the absence of GATA-1, committed erythroid precursors fail to complete maturation and instead undergo apoptosis. 1 By by SCONJ IN _ _ _ _ _ 2 examining examine VERB VBG VerbForm=Ger _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 vitro vitro PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 differentiated differentiate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 embryonic embryonic ADJ JJ Degree=Pos _ _ _ _ 8 stem stem NOUN NN Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 12 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 previously previously ADV RB _ _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 absence absence NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 committed commit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 25 precursors precursor NOUN NNS Number=Plur _ _ _ _ 26 fail fail NOUN NN Number=Sing _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 complete complete ADJ JJ Degree=Pos _ _ _ _ 29 maturation maturation NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 instead instead ADV RB _ _ _ _ _ 32 undergo undergo ADJ JJ Degree=Pos _ _ _ _ 33 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 12431 # text = The mechanisms by which GATA-1 controls cell survival are unknown. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 3 by by ADP IN _ _ _ _ _ 4 which which DET WDT PronType=Int _ _ _ _ 5 GATA GATA NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 controls controls NOUN NN Number=Sing _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 survival survival NOUN NN Number=Sing _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 unknown unknown ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 12432 # text = Here we report that in erythroid cells, GATA-1 strongly induces the expression of the anti-apoptotic protein bcl-xL, but not the related proteins bcl-2 and mcl-1. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - SYM SYM _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 strongly strongly ADV RB _ _ _ _ _ 13 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 anti-apoptotic anti-apoptotic ADJ JJ Degree=Pos _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 xL xl NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 but but CCONJ CC _ _ _ _ _ 25 not not ADV RB _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 related related ADJ JJ Degree=Pos _ _ _ _ 28 proteins protein NOUN NNS Number=Plur _ _ _ _ 29 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 mcl mcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 12433 # text = Consistent with a role for bcl-xL in mediating GATA-1-induced erythroid cell survival, in vitro-differentiated bcl-xL-/- embryonic stem cells fail to generate viable mature definitive erythroid cells, a phenotype resembling that of GATA-1 gene disruption. 1 Consistent consistent VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 xL xl NOUN NN Number=Sing _ _ _ _ 9 in in SCONJ IN _ _ _ _ _ 10 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 11 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 survival survival NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 vitro vitro ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 differentiated differentiated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 xL xl NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 -/- -/- PUNCT . _ _ _ _ _ 28 embryonic embryonic ADJ JJ Degree=Pos _ _ _ _ 29 stem stem NOUN NN Number=Sing _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 fail fail VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 32 to to PART TO _ _ _ _ _ 33 generate generate VERB VB VerbForm=Inf _ _ _ _ 34 viable viable ADJ JJ Degree=Pos _ _ _ _ 35 mature mature NOUN NN Number=Sing _ _ _ _ 36 definitive definitive ADJ JJ Degree=Pos _ _ _ _ 37 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 41 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 42 resembling resembl VERB VBG VerbForm=Ger _ _ _ _ 43 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ _ 48 gene gene NOUN NN Number=Sing _ _ _ _ 49 disruption disruption NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 12434 # text = In addition, we show that erythropoietin, which is also required for erythroid cell survival, cooperates with GATA-1 to stimulate bcl-xL gene expression and to maintain erythroid cell viability during terminal maturation. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 5 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 erythropoietin erythropoietin NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 which which PRON WDT PronType=Rel _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 also also ADV RB _ _ _ _ _ 12 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 erythroid erythroid VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 survival survival NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 cooperates cooperate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 25 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 xL xl NOUN NN Number=Sing _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 maintain maintain VERB VB VerbForm=Inf _ _ _ _ 33 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 viability viability NOUN NN Number=Sing _ _ _ _ 36 during during ADP IN _ _ _ _ _ 37 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 38 maturation maturation NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 12435 # text = Together, our data show that bcl-xL is essential for normal erythroid development and suggest a regulatory hierarchy in which bcl-xL is a critical downstream effector of GATA-1 and erythropoietin-mediated signals. 1 Together together ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 data data NOUN NN Number=Sing _ _ _ _ 5 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 xL xl NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 essential essential ADJ JJ Degree=Pos _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 normal normal ADJ JJ Degree=Pos _ _ _ _ 14 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 15 development development NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 20 hierarchy hierarchy NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 which which PRON WDT PronType=Rel _ _ _ _ 23 bcl bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 xL xl NOUN NN Number=Sing _ _ _ _ 26 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 critical critical ADJ JJ Degree=Pos _ _ _ _ 29 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 30 effector effector NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 erythropoietin- erythropoietin- SYM SYM _ _ _ _ SpaceAfter=No 37 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 signals signal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12436 # text = Document 0030012981 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012981 0030012981 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12437 # text = Estrogen receptor diminishes DNA-binding activities of chicken GATA-1 and CACCC-binding proteins. 1 Estrogen Estrogen ADJ JJ Degree=Pos _ _ _ _ 2 receptor receptor NOUN NN Number=Sing _ _ _ _ 3 diminishes diminishe VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 activities activity NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 chicken chicken NOUN NN Number=Sing _ _ _ _ 10 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 CACCC Caccc NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 binding binding VERB VBG VerbForm=Ger _ _ _ _ 17 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12438 # text = The estrogen receptor (ER) repressed erythroid differentiation and erythroid-specific gene expression. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 estrogen estrogen NOUN NN Number=Sing _ _ _ _ 3 receptor receptor NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 ER er NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 repressed repress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 9 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 12439 # text = In this study, we investigated the effect of ER alpha (referred to throughout as ER) on DNA-binding activities of transcription factors involved in regulating the expression of erythroid-specific genes, and, in particular, the histone 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 effect effect NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 ER er NOUN NN Number=Sing _ _ _ _ 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 referred refer VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 throughout throughout VERB VB VerbForm=Inf _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 ER er NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 on on ADP IN _ _ _ _ _ 20 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 binding binding VERB VBG VerbForm=Ger _ _ _ _ 23 activities activity NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ _ 26 factors factor NOUN NNS Number=Plur _ _ _ _ 27 involved involved ADJ JJ Degree=Pos _ _ _ _ 28 in in SCONJ IN _ _ _ _ _ 29 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 expression expression NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 specific specific ADJ JJ Degree=Pos _ _ _ _ 36 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 and and CCONJ CC _ _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 particular particular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 histone histone NOUN NN Number=Sing _ _ _ _ # sent_id = 12440 # text = H5 gene. 1 H5 H5 NUM CD NumType=Card _ _ _ _ 2 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 . . PUNCT . _ _ _ _ _ # sent_id = 12441 # text = Using electrophoretic mobility shift assays, we found that in the presence of rabbit reticulocyte lysate, human ER reduced the binding activities of chicken immature erythrocyte nuclear extracted proteins to GATA and CACCC sites in the H5 promoter and enhancer. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 3 mobility mobility NOUN NN Number=Sing _ _ _ _ 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 8 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 presence presence NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 rabbit rabbit NOUN NN Number=Sing _ _ _ _ 15 reticulocyte reticulocyte NOUN NN Number=Sing _ _ _ _ 16 lysate lysate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 ER er NOUN NN Number=Sing _ _ _ _ 20 reduced reduce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 activities activity NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 chicken chicken NOUN NN Number=Sing _ _ _ _ 26 immature immature NOUN NN Number=Sing _ _ _ _ 27 erythrocyte erythrocyte NOUN NN Number=Sing _ _ _ _ 28 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 29 extracted extract VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 proteins protein NOUN NNS Number=Plur _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 GATA GATA PROPN NNP Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 CACCC CACCC PROPN NNP Number=Sing _ _ _ _ 35 sites site NOUN NNS Number=Plur _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 H5 H5 PROPN NNP Number=Sing _ _ _ _ 39 promoter promoter NOUN NN Number=Sing _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 12442 # text = In contrast, the binding activities of NF1 and Sp1 were not affected by ER. Binding of ER to an estrogen response element was enhanced by addition of rabbit reticulocyte lysate. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 binding bind VERB VBG VerbForm=Ger _ _ _ _ 6 activities activity NOUN NNS Number=Plur _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 NF1 NF1 PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 not not PART RB _ _ _ _ _ 13 affected affect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 ER Er NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ 17 Binding binding NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 ER er NOUN NN Number=Sing _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 estrogen estrogen VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ _ 24 element element NOUN NN Number=Sing _ _ _ _ 25 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 26 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 addition addition NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 rabbit rabbit NOUN NN Number=Sing _ _ _ _ 31 reticulocyte reticulocyte NOUN NN Number=Sing _ _ _ _ 32 lysate lysate NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 12443 # text = This lysate was also necessary for ER to diminish the DNA-binding activity of GATA-1. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 lysate lysate NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 ER er NOUN NN Number=Sing _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 diminish diminish VERB VB VerbForm=Inf _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 binding bind VERB VBG VerbForm=Ger _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 12444 # text = These results suggest that additional factor(s) are necessary for full ER function. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 additional additional ADJ JJ Degree=Pos _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 s s X AFX _ _ _ _ SpaceAfter=No 9 ) ) PUNCT -RRB- _ _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 full full ADJ JJ Degree=Pos _ _ _ _ 14 ER er NOUN NN Number=Sing _ _ _ _ 15 function function NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 12445 # text = Both GATA-1 and CACCC-binding proteins are critical for the developmentally regulated expression of erythroid-specific genes. 1 Both both DET DT _ _ _ _ _ 2 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 CACCC Caccc NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 critical critical ADJ JJ Degree=Pos _ _ _ _ 12 for for ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 developmentally developmentally ADV RB _ _ _ _ _ 15 regulated regulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 specific specific ADJ JJ Degree=Pos _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 12446 # text = We hypothesize that interference in DNA-binding activities of GATA-1 and CACCC-binding proteins is the mechanism by which the ER inhibits regulation of these genes. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 hypothesize hypothesize VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 interference interference NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 DNA Dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 activities activity NOUN NNS Number=Plur _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 CACCC Caccc NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 binding binding VERB VBG VerbForm=Ger _ _ _ _ 18 proteins protein NOUN NNS Number=Plur _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 ER er NOUN NN Number=Sing _ _ _ _ 26 inhibits inhibits NOUN NNS Number=Plur _ _ _ _ 27 regulation regulation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 30 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12447 # text = Document 0030012984 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012984 0030012984 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12448 # text = Transcription factor requirements for U2 snRNA-encoding gene activation in B lymphoid cells. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 requirements requirement NOUN NNS Number=Plur _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 U2 U2 NUM CD NumType=Card _ _ _ _ 6 snRNA snRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 encoding encod NOUN NN Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 B b ADJ JJ Degree=Pos _ _ _ _ 13 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12449 # text = Transcription of a human U2 small nuclear RNA(snRNA)-encoding gene in HeLa cells requires a distal enhancer element, which is composed of one octamer motif (Oct) and three Sp 1-binding sites. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 U2 u2 NOUN NN Number=Sing _ _ _ _ 6 small small ADJ JJ Degree=Pos _ _ _ _ 7 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 8 RNA RNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 snRNA snRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 12 - - PUNCT : _ _ _ _ SpaceAfter=No 13 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 distal distal ADJ JJ Degree=Pos _ _ _ _ 21 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 22 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 one one NUM CD NumType=Card _ _ _ _ 29 octamer octamer ADJ JJR Degree=Cmp _ _ _ _ 30 motif motif NOUN NN Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 three three NUM CD NumType=Card _ _ _ _ 36 Sp sp NOUN NN Number=Sing _ _ _ _ 37 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 - - PUNCT , _ _ _ _ SpaceAfter=No 39 binding bind VERB VBG VerbForm=Ger _ _ _ _ 40 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 12450 # text = To study the transcription factor requirement in B-cells, different 1 To to PART TO _ _ _ _ _ 2 study study VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 requirement requirement NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 B b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 different different ADJ JJ Degree=Pos _ _ _ _ # sent_id = 12451 # text = U2 enhancer constructions were transfected into the lymphoid cell line, BJA-B. 1 U2 U2 NUM CD NumType=Card _ _ _ _ 2 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 3 constructions construction NOUN NNS Number=Plur _ _ _ _ 4 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 transfected transfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 into into ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 BJA BJA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 12452 # text = The results showed that the activation of U2 snRNA transcription in B-cells also requires an enhancer comprising both the Oct and at least one Sp 1-binding site. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 U2 U2 NUM CD NumType=Card _ _ _ _ 9 snRNA snRNa NOUN NN Number=Sing _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 also also ADV RB _ _ _ _ _ 15 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 18 comprising comprise NOUN NN Number=Sing _ _ _ _ 19 both both CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 Oct Oct PROPN NNP Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 at at ADV RB _ _ _ _ _ 24 least least ADV RBS Degree=Sup _ _ _ _ 25 one one NUM CD NumType=Card _ _ _ _ 26 Sp sp NOUN NN Number=Sing _ _ _ _ 27 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 binding bind VERB VBG VerbForm=Ger _ _ _ _ 30 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 12453 # text = Deletion of all the Sp 1-binding sites from the enhancer reduces transcription by 80-90% in HeLa, as well as in BJA-B cells, whereas the removal of the octamer-binding site reduces transcription to levels below detection in both cell types. 1 Deletion Deletion NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 all all DET PDT _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 Sp sp NOUN NN Number=Sing _ _ _ _ 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 sites site NOUN NNS Number=Plur _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 13 reduces reduce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 80 80 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - SYM SYM _ _ _ _ SpaceAfter=No 18 90 90 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 % % SYM NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 HeLa HeLa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 as as ADV RB _ _ _ _ _ 24 well well ADV RB Degree=Pos _ _ _ _ 25 as as ADP IN _ _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 BJA BJA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 B b ADJ JJ Degree=Pos _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 whereas whereas SCONJ IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 removal removal NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 binding bind VERB VBG VerbForm=Ger _ _ _ _ 40 site site NOUN NN Number=Sing _ _ _ _ 41 reduces reduce NOUN NNS Number=Plur _ _ _ _ 42 transcription transcription NOUN NN Number=Sing _ _ _ _ 43 to to ADP IN _ _ _ _ _ 44 levels level NOUN NNS Number=Plur _ _ _ _ 45 below below ADP IN _ _ _ _ _ 46 detection detection NOUN NN Number=Sing _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 both both DET DT _ _ _ _ _ 49 cell cell NOUN NN Number=Sing _ _ _ _ 50 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 12454 # text = Enhancers containing a single Oct have, nevertheless, the capacity to partially activate U2 snRNA transcription in both HeLa cells, in which only OTF-1 is expressed, and in BJA-B cells in which OTF-2 is the predominantly expressed octamer-binding factor. 1 Enhancers Enhancer NOUN NNS Number=Plur _ _ _ _ 2 containing contain VERB VBG VerbForm=Ger _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 single single ADJ JJ Degree=Pos _ _ _ _ 5 Oct Oct PROPN NNP Number=Sing _ _ _ _ 6 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 nevertheless nevertheless ADV RB _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 capacity capacity NOUN NN Number=Sing _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 partially partially ADV RB _ _ _ _ _ 14 activate activate VERB VB VerbForm=Inf _ _ _ _ 15 U2 U2 NUM CD NumType=Card _ _ _ _ 16 snRNA snRNa NOUN NN Number=Sing _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 both both DET DT _ _ _ _ _ 20 HeLa Hela PROPN NNP Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 only only ADV RB _ _ _ _ _ 26 OTF Otf ADV RB _ _ _ _ SpaceAfter=No 27 - - PUNCT , _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 BJA BJA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT , _ _ _ _ SpaceAfter=No 36 B b ADJ JJ Degree=Pos _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 which which PRON WDT PronType=Rel _ _ _ _ 40 OTF OTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - SYM SYM _ _ _ _ SpaceAfter=No 42 2 2 NUM CD NumType=Card _ _ _ _ 43 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 predominantly predominantly ADV RB _ _ _ _ _ 46 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 47 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 binding binding VERB VBG VerbForm=Ger _ _ _ _ 50 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 12455 # text = The most likely interpretation of our results is that both the ubiquitous transcription factor, OTF-1, and the B-cell-specific transcription factor, OTF-2, can activate U2 snRNA transcription. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 most most ADV RBS _ _ _ _ _ 3 likely likely ADJ JJ Degree=Pos _ _ _ _ 4 interpretation interpretation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 7 results result NOUN NNS Number=Plur _ _ _ _ 8 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 both both CCONJ CC _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 OTF OTF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 B- b- NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 specific specific ADJ JJ Degree=Pos _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 OTF OTF NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 can can AUX MD VerbForm=Fin _ _ _ _ 34 activate activate VERB VB VerbForm=Inf _ _ _ _ 35 U2 U2 NUM CD NumType=Card _ _ _ _ 36 snRNA snRNa NOUN NN Number=Sing _ _ _ _ 37 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 12456 # text = The results also revealed a similar functional cooperation between the transcription factors which bind to the Oct and the adjacent Sp 1-binding site in BJA-B cells, as has been observed in HeLa cells, since a template which contains a weak binding site for OTFs expresses wild-type levels of U2 snRNA in both cell types when the weak octamer-binding site is combined with a Sp 1-binding site. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 also also ADV RB _ _ _ _ _ 4 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 similar similar ADJ JJ Degree=Pos _ _ _ _ 7 functional functional ADJ JJ Degree=Pos _ _ _ _ 8 cooperation cooperation NOUN NN Number=Sing _ _ _ _ 9 between between ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 Oct Oct PROPN NNP Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 adjacent adjacent ADJ JJ Degree=Pos _ _ _ _ 21 Sp sp NOUN NN Number=Sing _ _ _ _ 22 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 binding bind VERB VBG VerbForm=Ger _ _ _ _ 25 site site NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 BJA BJA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 B b ADJ JJ Degree=Pos _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 as as SCONJ IN _ _ _ _ _ 33 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 35 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 HeLa Hela PROPN NNP Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 since since ADP IN _ _ _ _ _ 41 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 42 template template NOUN NN Number=Sing _ _ _ _ 43 which which PRON WDT PronType=Rel _ _ _ _ 44 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 45 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 46 weak weak ADJ JJ Degree=Pos _ _ _ _ 47 binding bind VERB VBG VerbForm=Ger _ _ _ _ 48 site site NOUN NN Number=Sing _ _ _ _ 49 for for ADP IN _ _ _ _ _ 50 OTFs Otfs PROPN NNP Number=Sing _ _ _ _ 51 expresses expresse VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 52 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 53 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 54 type type NOUN NN Number=Sing _ _ _ _ 55 levels level NOUN NNS Number=Plur _ _ _ _ 56 of of ADP IN _ _ _ _ _ 57 U2 U2 NUM CD NumType=Card _ _ _ _ 58 snRNA snRNa NOUN NN Number=Sing _ _ _ _ 59 in in ADP IN _ _ _ _ _ 60 both both DET DT _ _ _ _ _ 61 cell cell NOUN NN Number=Sing _ _ _ _ 62 types type NOUN NNS Number=Plur _ _ _ _ 63 when when ADV WRB PronType=Int _ _ _ _ 64 the the DET DT Definite=Def|PronType=Art _ _ _ _ 65 weak weak ADJ JJ Degree=Pos _ _ _ _ 66 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 67 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 68 binding binding VERB VBG VerbForm=Ger _ _ _ _ 69 site site NOUN NN Number=Sing _ _ _ _ 70 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 71 combined combin VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 72 with with ADP IN _ _ _ _ _ 73 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 74 Sp sp NOUN NN Number=Sing _ _ _ _ 75 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 76 - - PUNCT , _ _ _ _ SpaceAfter=No 77 binding bind VERB VBG VerbForm=Ger _ _ _ _ 78 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 79 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12457 # text = Document 0030012991 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012991 0030012991 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12458 # text = Unexpected and coordinated expression of Spi-1, Fli-1, and megakaryocytic genes in four Epo-dependent cell lines established from transgenic mice displaying erythroid-specific expression of a thermosensitive SV40 T antigen. 1 Unexpected unexpect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 coordinated coordinate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 Fli Fli PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 14 genes gene NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 four four NUM CD NumType=Card _ _ _ _ 17 Epo-dependent Epo-dependent ADJ JJ Degree=Pos _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 lines line NOUN NNS Number=Plur _ _ _ _ 20 established establish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 from from ADP IN _ _ _ _ _ 22 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 23 mice mouse NOUN NNS Number=Plur _ _ _ _ 24 displaying display VERB VBG VerbForm=Ger _ _ _ _ 25 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 specific specific ADJ JJ Degree=Pos _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 31 thermosensitive thermosensitive ADJ JJ Degree=Pos _ _ _ _ 32 SV40 SV40 PROPN NNP Number=Sing _ _ _ _ 33 T T PROPN NNP Number=Sing _ _ _ _ 34 antigen antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12459 # text = Most erythroleukemic cell lines established in vitro coexpress erythrocytic and megakaryocytic markers that often are associated with expression of Spi-1 and/or Fli-1 transcription factors known as transactivators of megakaryocyte-specific promoters. 1 Most most ADJ JJS Degree=Sup _ _ _ _ 2 erythroleukemic erythroleukemic ADJ JJ Degree=Pos _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 lines line NOUN NNS Number=Plur _ _ _ _ 5 established establish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 vitro vitro NOUN NN Number=Sing _ _ _ _ 8 coexpress coexpress NOUN NNS Number=Plur _ _ _ _ 9 erythrocytic erythrocytic ADJ JJ Degree=Pos _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 12 markers marker NOUN NNS Number=Plur _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 often often ADV RB _ _ _ _ _ 15 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ SpaceAfter=No 24 / / PUNCT , _ _ _ _ SpaceAfter=No 25 or or CCONJ CC _ _ _ _ _ 26 Fli Fli PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 factors factor NOUN NNS Number=Plur _ _ _ _ 31 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 as as ADP IN _ _ _ _ _ 33 transactivators transactivator NOUN NNS Number=Plur _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 megakaryocyte megakaryocyte ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 specific specific ADJ JJ Degree=Pos _ _ _ _ 38 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 12460 # text = In the present study, we examined the possibility of establishing new cell lines keeping strictly erythroid-specific properties in vitro through the targeted and conditional immortalization of erythrocytic progenitors. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 possibility possibility NOUN NN Number=Sing _ _ _ _ 10 of of SCONJ IN _ _ _ _ _ 11 establishing establish VERB VBG VerbForm=Ger _ _ _ _ 12 new new ADJ JJ Degree=Pos _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 lines line NOUN NNS Number=Plur _ _ _ _ 15 keeping keep VERB VBG VerbForm=Ger _ _ _ _ 16 strictly strictly ADV RB _ _ _ _ _ 17 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 properties property NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 vitro vitro NOUN NN Number=Sing _ _ _ _ 23 through through ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 targeted target ADJ JJ Degree=Pos _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 conditional conditional ADJ JJ Degree=Pos _ _ _ _ 28 immortalization immortalization NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 erythrocytic erythrocytic ADJ JJ Degree=Pos _ _ _ _ 31 progenitors progenitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 12461 # text = For that purpose, we established several lines of transgenic mice displaying erythroid-specific expression of a thermosensitive SV40 T antigen. 1 For for ADP IN _ _ _ _ _ 2 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 3 purpose purpose NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 established establish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 several several ADJ JJ Degree=Pos _ _ _ _ 8 lines line NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 11 mice mouse NOUN NNS Number=Plur _ _ _ _ 12 displaying display VERB VBG VerbForm=Ger _ _ _ _ 13 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 specific specific ADJ JJ Degree=Pos _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 thermosensitive thermosensitive ADJ JJ Degree=Pos _ _ _ _ 20 SV40 SV40 PROPN NNP Number=Sing _ _ _ _ 21 T T PROPN NNP Number=Sing _ _ _ _ 22 antigen antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 12462 # text = As expected, these transgenic mice developed splenomegaly due to the massive amplification of Ter 119 positive erythroid nucleated cells expressing T antigen. 1 As as ADP IN _ _ _ _ _ 2 expected expect VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 6 mice mouse NOUN NNS Number=Plur _ _ _ _ 7 developed develop VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 splenomegaly splenomegaly ADV RB _ _ _ _ _ 9 due due ADP IN _ _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 massive massive ADJ JJ Degree=Pos _ _ _ _ 13 amplification amplification NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 Ter Ter PROPN NNP Number=Sing _ _ _ _ 16 119 119 NUM CD NumType=Card _ _ _ _ 17 positive positive ADJ JJ Degree=Pos _ _ _ _ 18 erythroid erythroid NOUN NN Number=Sing _ _ _ _ 19 nucleated nucleate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 antigen antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 12463 # text = Despite this drastic effect in vivo, the in vitro immortalization of erythropoietin-dependent erythroid progenitors unexpectedly occurred at low frequency, and all four cell lines established expressed both erythrocytic (globins) and megakaryocytic markers (glycoprotein IIb, platelet factor 1 Despite despite ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 drastic drastic ADJ JJ Degree=Pos _ _ _ _ 4 effect effect NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 vivo vivo PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 11 immortalization immortalization NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 erythropoietin erythropoietin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 16 erythroid erythroid NOUN NN Number=Sing _ _ _ _ 17 progenitors progenitor NOUN NNS Number=Plur _ _ _ _ 18 unexpectedly unexpectedly ADV RB _ _ _ _ _ 19 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 at at ADP IN _ _ _ _ _ 21 low low ADJ JJ Degree=Pos _ _ _ _ 22 frequency frequency NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 all all DET PDT _ _ _ _ _ 26 four four NUM CD NumType=Card _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ _ 28 lines line NOUN NNS Number=Plur _ _ _ _ 29 established establish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 expressed express ADJ JJ Degree=Pos _ _ _ _ 31 both both CCONJ CC _ _ _ _ _ 32 erythrocytic erythrocytic ADJ JJ Degree=Pos _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 globins globin NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 ) ) PUNCT -RRB- _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 38 markers marker NOUN NNS Number=Plur _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 glycoprotein glycoprotein NOUN NN Number=Sing _ _ _ _ 41 IIb IIb NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 , , PUNCT , _ _ _ _ _ 43 platelet platelet NOUN NN Number=Sing _ _ _ _ 44 factor factor NOUN NN Number=Sing _ _ _ _ # sent_id = 12464 # text = 4) as well as Spi-1 and Fli-1 transcripts at permissive temperature. 1 4 4 X LS _ _ _ _ SpaceAfter=No 2 ) ) PUNCT -RRB- _ _ _ _ _ 3 as as ADV RB _ _ _ _ _ 4 well well ADV RB Degree=Pos _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 -1 -1 NUM CD NumType=Card _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 Fli Fli PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 transcripts transcript NOUN NNS Number=Plur _ _ _ _ 13 at at ADP IN _ _ _ _ _ 14 permissive permissive ADJ JJ Degree=Pos _ _ _ _ 15 temperature temperature NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 12465 # text = Switching the cells to the nonpermissive temperature led to a marked increase in globin gene expression and concomitant decrease in expression of Spi-1, Fli-1, and megakaryocytic genes in an erythropoietin-dependent manner. 1 Switching switch VERB VBG VerbForm=Ger _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 nonpermissive nonpermissive ADJ JJ Degree=Pos _ _ _ _ 7 temperature temperature NOUN NN Number=Sing _ _ _ _ 8 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 increase increase NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 globin globin ADJ JJ Degree=Pos _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 concomitant concomitant ADJ JJ Degree=Pos _ _ _ _ 19 decrease decrease NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 Fli Fli PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 31 genes gene NOUN NNS Number=Plur _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 erythropoietin erythropoietin NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 37 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 12466 # text = Interestingly, enhanced expression of Spi-1 and Fli-1 genes already was detected in the Ter 119 positive cell population of transgenic mice spleen in vivo. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 -1 -1 NUM CD NumType=Card _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 Fli Fli PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 genes gene NOUN NNS Number=Plur _ _ _ _ 13 already already ADV RB _ _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 Ter Ter NOUN NN Number=Sing _ _ _ _ 19 119 119 NUM CD NumType=Card _ _ _ _ 20 positive positive ADJ JJ Degree=Pos _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 population population NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 25 mice mouse NOUN NNS Number=Plur _ _ _ _ 26 spleen spleen VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 12467 # text = However, like normal Ter 119 erythroid cells, these Ter 119 positive cells from transgenic mice still expressed high levels of beta-globin and very low or undetectable glycoprotein IIb and platelet factor 4 megakaryocytic transcripts. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 like like ADP IN _ _ _ _ _ 4 normal normal ADJ JJ Degree=Pos _ _ _ _ 5 Ter Ter PROPN NNP Number=Sing _ _ _ _ 6 119 119 NUM CD NumType=Card _ _ _ _ 7 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 Ter Ter NOUN NN Number=Sing _ _ _ _ 12 119 119 NUM CD NumType=Card _ _ _ _ 13 positive positive ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 17 mice mouse NOUN NNS Number=Plur _ _ _ _ 18 still still ADV RB _ _ _ _ _ 19 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 high high ADJ JJ Degree=Pos _ _ _ _ 21 levels level NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 globin globin NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 very very ADV RB _ _ _ _ _ 28 low low ADJ JJ Degree=Pos _ _ _ _ 29 or or CCONJ CC _ _ _ _ _ 30 undetectable undetectable ADJ JJ Degree=Pos _ _ _ _ 31 glycoprotein glycoprotein NOUN NN Number=Sing _ _ _ _ 32 IIb IIb NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 platelet platelet NOUN NN Number=Sing _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ _ 36 4 4 NUM CD NumType=Card _ _ _ _ 37 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 38 transcripts transcript NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 12468 # text = Taken together, these data indicate that the unexpected expression of megakaryocytic genes is a specific property of immortalized cells that cannot be explained only by enhanced expression of Spi-1 and/or Fli-1 genes. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 data data NOUN NN Number=Sing _ _ _ _ 6 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 unexpected unexpected ADJ JJ Degree=Pos _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 megakaryocytic megakaryocytic ADJ JJ Degree=Pos _ _ _ _ 13 genes gene NOUN NNS Number=Plur _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 property property NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 immortalized immortalized ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 that that PRON WDT PronType=Rel _ _ _ _ 22 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 23 not not PART RB _ _ _ _ _ 24 be be AUX VB VerbForm=Inf _ _ _ _ 25 explained explain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 only only ADV RB _ _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 Spi Spi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 1 1 NUM CD NumType=Card _ _ _ _ 34 and and CCONJ CC _ _ _ _ SpaceAfter=No 35 / / PUNCT , _ _ _ _ SpaceAfter=No 36 or or CCONJ CC _ _ _ _ _ 37 Fli Fli PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ _ 40 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12469 # text = Document 0030012995 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012995 0030012995 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12470 # text = EBF and E47 collaborate to induce expression of the endogenous immunoglobulin surrogate light chain genes. 1 EBF EBF PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 E47 E47 NUM CD NumType=Card _ _ _ _ 4 collaborate collaborate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 induce induce VERB VB VerbForm=Inf _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 11 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 12 surrogate surrogate NOUN NN Number=Sing _ _ _ _ 13 light light NOUN NN Number=Sing _ _ _ _ 14 chain chain NOUN NN Number=Sing _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12471 # text = Early B cell factor (EBF) and E47 participate in the transcriptional control of early B lymphocyte differentiation. 1 Early Early ADV RB _ _ _ _ _ 2 B b ADJ JJ Degree=Pos _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 EBF EBF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 E47 E47 NUM CD NumType=Card _ _ _ _ 10 participate participate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 14 control control NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 early early ADJ JJ Degree=Pos _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 19 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 12472 # text = With the aim of identifying genetic targets for these transcription factors, we stably transfected cDNAs encoding EBF or a covalent homodimer of E47, individually or together, into immature hematopoietic Ba/F3 cells, which lack both factors. 1 With with ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 aim aim NOUN NN Number=Sing _ _ _ _ 4 of of SCONJ IN _ _ _ _ _ 5 identifying identify VERB VBG VerbForm=Ger _ _ _ _ 6 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 7 targets target NOUN NNS Number=Plur _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 stably stably ADV RB _ _ _ _ _ 15 transfected transfect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 cDNAs cDNAs SCONJ IN _ _ _ _ _ 17 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 18 EBF EBF PROPN NNP Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 covalent covalent ADJ JJ Degree=Pos _ _ _ _ 22 homodimer homodimer NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 E47 E47 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 individually individually ADV RB _ _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 together together ADV RB _ _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 into into ADP IN _ _ _ _ _ 31 immature immature ADJ JJ Degree=Pos _ _ _ _ 32 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 33 Ba/F3 Ba/F3 NOUN NN Number=Sing _ _ _ _ 34 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 which which PRON WDT PronType=Rel _ _ _ _ 37 lack lack VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 38 both both DET DT _ _ _ _ _ 39 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 12473 # text = In combination, EBF and E47 induce efficient expression of the endogenous immunoglobulin surrogate light chain genes, lambda5 and VpreB, whereas other pre-B cell-specific genes remain silent. 1 In in ADP IN _ _ _ _ _ 2 combination combination NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 EBF EBF PROPN NNP Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 E47 E47 NUM CD NumType=Card _ _ _ _ 7 induce induce NOUN NN Number=Sing _ _ _ _ 8 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 13 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 14 surrogate surrogate NOUN NN Number=Sing _ _ _ _ 15 light light NOUN NN Number=Sing _ _ _ _ 16 chain chain NOUN NN Number=Sing _ _ _ _ 17 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 lambda5 lambda5 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 VpreB VpreB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 whereas whereas SCONJ IN _ _ _ _ _ 24 other other ADJ JJ Degree=Pos _ _ _ _ 25 pre pre X AFX _ _ _ _ SpaceAfter=No 26 -B -b ADJ JJ Degree=Pos _ _ _ _ 27 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 specific specific ADJ JJ Degree=Pos _ _ _ _ 30 genes gene NOUN NNS Number=Plur _ _ _ _ 31 remain remain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 32 silent silent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 12474 # text = Multiple functionally important EBF and E47 binding sites were identified in the lambda5 promoter/enhancer region, indicating that lambda5 is a direct genetic target for these transcription factors. 1 Multiple multiple PROPN NNP Number=Sing _ _ _ _ 2 functionally functionally ADV RB _ _ _ _ _ 3 important important ADJ JJ Degree=Pos _ _ _ _ 4 EBF EBF PROPN NNP Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 E47 E47 NUM CD NumType=Card _ _ _ _ 7 binding binding ADJ JJ Degree=Pos _ _ _ _ 8 sites site NOUN NNS Number=Plur _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 lambda5 lambda5 NOUN NN Number=Sing _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 17 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 lambda5 lambda5 NOUN NN Number=Sing _ _ _ _ 22 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 direct direct ADJ JJ Degree=Pos _ _ _ _ 25 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 26 target target NOUN NN Number=Sing _ _ _ _ 27 for for ADP IN _ _ _ _ _ 28 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 12475 # text = Taken together, these data suggest that EBF and E47 synergize to activate expression of a subset of genes that define an early stage of the B cell lineage. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 data data NOUN NN Number=Sing _ _ _ _ 6 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 EBF EBF PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 E47 E47 NUM CD NumType=Card _ _ _ _ 11 synergize synergize NOUN NN Number=Sing _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 activate activate VERB VB VerbForm=Inf _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 subset subset NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 genes gene NOUN NNS Number=Plur _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 define define VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 early early ADJ JJ Degree=Pos _ _ _ _ 24 stage stage NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 B b ADJ JJ Degree=Pos _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12476 # text = Document 0030012996 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012996 0030012996 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12477 # text = Characterization of the human platelet/endothelial cell adhesion molecule-1 promoter: identification of a GATA-2 binding element required for optimal transcriptional activity. 1 Characterization Characterization NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 platelet platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 / / PUNCT , _ _ _ _ SpaceAfter=No 7 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 10 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 : : PUNCT : _ _ _ _ _ 15 identification identification NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 GATA GATA NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 binding binding VERB VBG VerbForm=Ger _ _ _ _ 22 element element NOUN NN Number=Sing _ _ _ _ 23 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 26 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 27 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12478 # text = Platelet/endothelial cell adhesion molecule-1 (PECAM-1) is a 130-kD member of the Ig gene superfamily that is expressed on platelets, endothelial cells, and certain leukocyte subsets. 1 Platelet Platelet NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 / / PUNCT , _ _ _ _ SpaceAfter=No 3 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 6 molecule molecule NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT : _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 PECAM PECAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT , _ _ _ _ SpaceAfter=No 12 1 1 X LS _ _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 130 130 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kD kd NOUN NN Number=Sing _ _ _ _ 19 member member NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 Ig ig PROPN NNP Number=Sing _ _ _ _ 23 gene gene NOUN NN Number=Sing _ _ _ _ 24 superfamily superfamily NOUN NN Number=Sing _ _ _ _ 25 that that PRON WDT PronType=Rel _ _ _ _ 26 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 27 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 on on ADP IN _ _ _ _ _ 29 platelets platelet NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 certain certain ADJ JJ Degree=Pos _ _ _ _ 36 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 37 subsets subset NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 12479 # text = To examine the factors controlling vascular-specific expression of PECAM-1, we cloned the 5'-flanking region of the PECAM-1 gene and analyzed its transcriptional activity. 1 To to PART TO _ _ _ _ _ 2 examine examine VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 factors factor NOUN NNS Number=Plur _ _ _ _ 5 controlling control VERB VBG VerbForm=Ger _ _ _ _ 6 vascular vascular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 PECAM PECAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 16 cloned clon VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 22 region region NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 PECAM PECAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 analyzed analyze VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 31 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 32 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 33 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 12480 # text = 5'-Rapid amplification of cDNA ends (5'-RACE) analysis showed that transcription initiation occurred at several closely spaced nearby sites originating approximately 204 bp upstream from the translation start site. 1 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 ' ' NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 - - PUNCT : _ _ _ _ SpaceAfter=No 4 Rapid rapid ADJ JJ Degree=Pos _ _ _ _ 5 amplification amplification NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 8 ends end NOUN NNS Number=Plur _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 '- '- PUNCT . _ _ _ _ SpaceAfter=No 12 RACE race NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 analysis analysis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ _ 18 initiation initiation NOUN NN Number=Sing _ _ _ _ 19 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 at at ADP IN _ _ _ _ _ 21 several several ADJ JJ Degree=Pos _ _ _ _ 22 closely closely ADV RB _ _ _ _ _ 23 spaced space VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 nearby nearby ADJ JJ Degree=Pos _ _ _ _ 25 sites site NOUN NNS Number=Plur _ _ _ _ 26 originating originat VERB VBG VerbForm=Ger _ _ _ _ 27 approximately approximately ADV RB _ _ _ _ _ 28 204 204 NUM CD NumType=Card _ _ _ _ 29 bp bp NOUN NN Number=Sing _ _ _ _ 30 upstream upstream NOUN NN Number=Sing _ _ _ _ 31 from from ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 translation translation NOUN NN Number=Sing _ _ _ _ 34 start start NOUN NN Number=Sing _ _ _ _ 35 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 12481 # text = Analysis of the sequence immediately upstream from the transcription initiation site (TIS) showed no canonical TATA or CAAT elements, however an initiator element commonly found in TATA-less promoters encompassed the TIS. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 sequence sequence NOUN NN Number=Sing _ _ _ _ 5 immediately immediately ADV RB _ _ _ _ _ 6 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 transcription transcription NOUN NN Number=Sing _ _ _ _ 10 initiation initiation NOUN NN Number=Sing _ _ _ _ 11 site site NOUN NN Number=Sing _ _ _ _ 12 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 13 TIS TIS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 no no DET DT _ _ _ _ _ 17 canonical canonical ADJ JJ Degree=Pos _ _ _ _ 18 TATA TATa NOUN NN Number=Sing _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 CAAT Caat NOUN NN Number=Sing _ _ _ _ 21 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 however however ADV RB _ _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 initiator initiator NOUN NN Number=Sing _ _ _ _ 26 element element NOUN NN Number=Sing _ _ _ _ 27 commonly commonly ADV RB _ _ _ _ _ 28 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 TATA TATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 less less ADJ JJR Degree=Cmp _ _ _ _ 33 promoters promoter NOUN NNS Number=Plur _ _ _ _ 34 encompassed encompass VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 TIS tis NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 12482 # text = 5'-serially truncated PECAM-1 promoter segments cloned in front of a luciferase reporter drove transcription in both a lineage- and orientation-specific manner. 1 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 ' ' NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 serially serially ADV RB _ _ _ _ _ 5 truncated truncate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 PECAM PECAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 segments segment NOUN NNS Number=Plur _ _ _ _ 11 cloned clon VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 front front NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 luciferase luciferase NOUN NN Number=Sing _ _ _ _ 17 reporter reporter NOUN NN Number=Sing _ _ _ _ 18 drove drive VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 both both CCONJ CC _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 orientation orientation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 specific specific ADJ JJ Degree=Pos _ _ _ _ 29 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 12483 # text = Putative cis-acting control elements present within a 300-bp core promoter included two ets sites, an Sp1 site, tandem E-box domains, two GATA-associated sites (CACCC), an AP-2 binding site, and a GATA element at -24. 1 Putative Putative ADJ JJ Degree=Pos _ _ _ _ 2 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 acting act VERB VBG VerbForm=Ger _ _ _ _ 5 control control NOUN NN Number=Sing _ _ _ _ 6 elements element NOUN NNS Number=Plur _ _ _ _ 7 present present ADJ JJ Degree=Pos _ _ _ _ 8 within within ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 300 300 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 bp bp NOUN NN Number=Sing _ _ _ _ 13 core core NOUN NN Number=Sing _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 included include VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 two two NUM CD NumType=Card _ _ _ _ 17 ets et NOUN NNS Number=Plur _ _ _ _ 18 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 Sp1 sp1 NUM CD NumType=Card _ _ _ _ 22 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 tandem tandem NOUN NN Number=Sing _ _ _ _ 25 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 box box NOUN NN Number=Sing _ _ _ _ 27 domains domain NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 two two NUM CD NumType=Card _ _ _ _ 30 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 sites site NOUN NNS Number=Plur _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 CACCC CACCC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 2 2 NUM CD NumType=Card _ _ _ _ 42 binding binding NOUN NN Number=Sing _ _ _ _ 43 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 47 GATA GATa PROPN NNP Number=Sing _ _ _ _ 48 element element NOUN NN Number=Sing _ _ _ _ 49 at at ADP IN _ _ _ _ _ 50 - - SYM SYM _ _ _ _ SpaceAfter=No 51 24 24 NUM CD NumType=Card _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 12484 # text = Mutational analysis showed that optimal transcriptional activity required the GATA sequence at position -24, and gel-shift assays further showed that the GATA-2 transcription factor, but not GATA-1, bound to this region of the PECAM-1 promoter. 1 Mutational Mutational ADJ JJ Degree=Pos _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 optimal optimal ADJ JJ Degree=Pos _ _ _ _ 6 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 required require VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 GATA GATA PROPN NNP Number=Sing _ _ _ _ 11 sequence sequence NOUN NN Number=Sing _ _ _ _ 12 at at ADP IN _ _ _ _ _ 13 position position NOUN NN Number=Sing _ _ _ _ 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 24 24 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 gel gel NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 shift shift NOUN NN Number=Sing _ _ _ _ 21 assays assay NOUN NNS Number=Plur _ _ _ _ 22 further further ADV RB _ _ _ _ _ 23 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 that that SCONJ IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 but but CCONJ CC _ _ _ _ _ 33 not not ADV RB _ _ _ _ _ 34 GATA GATA NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 bound bound ADJ JJ Degree=Pos _ _ _ _ 39 to to ADP IN _ _ _ _ _ 40 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 41 region region NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 the the DET DT Definite=Def|PronType=Art _ _ _ _ 44 PECAM PECAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 1 1 NUM CD NumType=Card _ _ _ _ 47 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 12485 # text = Understanding the cis- and transacting factors that regulate the tissue-specific expression of PECAM-1 should increase our understanding of the mechanisms by which vascular-specific gene expression is achieved. 1 Understanding understand VERB VBG VerbForm=Ger _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 cis cis NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 transacting transact VERB VBG VerbForm=Ger _ _ _ _ 7 factors factor NOUN NNS Number=Plur _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 expression expression NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 PECAM PECAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 should should AUX MD VerbForm=Fin _ _ _ _ 20 increase increase VERB VB VerbForm=Inf _ _ _ _ 21 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 22 understanding understanding NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 which which PRON WDT PronType=Rel _ _ _ _ 28 vascular vascular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 specific specific ADJ JJ Degree=Pos _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ _ 33 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 34 achieved achieve VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12486 # text = Document 0030012998 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012998 0030012998 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12487 # text = Ectopic expression of a conditional GATA-2/estrogen receptor chimera arrests erythroid differentiation in a hormone-dependent manner. 1 Ectopic Ectopic ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 conditional conditional ADJ JJ Degree=Pos _ _ _ _ 6 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 10 estrogen estrogen NOUN NN Number=Sing _ _ _ _ 11 receptor receptor NOUN NN Number=Sing _ _ _ _ 12 chimera chimera NOUN NN Number=Sing _ _ _ _ 13 arrests arrest NOUN NNS Number=Plur _ _ _ _ 14 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 15 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 hormone hormone NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 21 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12488 # text = The GATA factors are a family of transcriptional regulatory proteins in eukaryotes that share extensive homology in their DNA-binding domains. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 GATA GATa NOUN NN Number=Sing _ _ _ _ 3 factors factor NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 family family NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 eukaryotes eukaryote NOUN NNS Number=Plur _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 share share VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 extensive extensive ADJ JJ Degree=Pos _ _ _ _ 16 homology homology NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 binding binding VERB VBG VerbForm=Ger _ _ _ _ 22 domains domain NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 12489 # text = One enigmatic aspect of GATA factor expression is that several GATA proteins, which ostensibly share the same DNA-binding site specificity, are coexpressed in erythroid cells. 1 One one NUM CD NumType=Card _ _ _ _ 2 enigmatic enigmatic ADJ JJ Degree=Pos _ _ _ _ 3 aspect aspect NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 GATA GATA PROPN NNP Number=Sing _ _ _ _ 6 factor factor NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 several several ADJ JJ Degree=Pos _ _ _ _ 11 GATA GATa NOUN NN Number=Sing _ _ _ _ 12 proteins protein VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 ostensibly ostensibly ADV RB _ _ _ _ _ 16 share share VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 same same ADJ JJ Degree=Pos _ _ _ _ 19 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 binding bind VERB VBG VerbForm=Ger _ _ _ _ 22 site site NOUN NN Number=Sing _ _ _ _ 23 specificity specificity NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 coexpressed coexpress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 12490 # text = To elucidate the roles of individual GATA factors in erythropoiesis, conditional alleles of GATA-1, GATA-2, and GATA-3 were prepared by fusing each of the factors to the hormone-binding domain of the human estrogen receptor (ER). 1 To to PART TO _ _ _ _ _ 2 elucidate elucidate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 roles role NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 individual individual ADJ JJ Degree=Pos _ _ _ _ 7 GATA GATa NOUN NN Number=Sing _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 erythropoiesis erythropoiesis ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 conditional conditional ADJ JJ Degree=Pos _ _ _ _ 13 alleles allele NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 3 3 NUM CD NumType=Card _ _ _ _ 27 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 prepared prepare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 by by SCONJ IN _ _ _ _ _ 30 fusing fuse VERB VBG VerbForm=Ger _ _ _ _ 31 each each DET DT _ _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 factors factor NOUN NNS Number=Plur _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 hormone hormone NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 binding bind VERB VBG VerbForm=Ger _ _ _ _ 40 domain domain NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 human human ADJ JJ Degree=Pos _ _ _ _ 44 estrogen estrogen NOUN NN Number=Sing _ _ _ _ 45 receptor receptor NOUN NN Number=Sing _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 ER er NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 12491 # text = These GATA/ER chimeric factors were shown to be hormone-inducible trans-activating proteins in transient transfection assays. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 / / PUNCT , _ _ _ _ SpaceAfter=No 4 ER er NOUN NN Number=Sing _ _ _ _ 5 chimeric chimeric ADJ JJ Degree=Pos _ _ _ _ 6 factors factor NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 hormone hormone VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 12 - - PUNCT , _ _ _ _ SpaceAfter=No 13 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 14 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 - - PUNCT , _ _ _ _ SpaceAfter=No 16 activating activat VERB VBG VerbForm=Ger _ _ _ _ 17 proteins protein NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 transient transient ADJ JJ Degree=Pos _ _ _ _ 20 transfection transfection NOUN NN Number=Sing _ _ _ _ 21 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 12492 # text = When stably introduced into primary erythroblasts or conditionally transformed erythroid progenitors cells, exogenous GATA-2/ER promoted proliferation and inhibited terminal differentiation in an estrogen-dependent manner. 1 When when ADV WRB PronType=Int _ _ _ _ 2 stably stably ADV RB Degree=Pos _ _ _ _ 3 introduced introduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 into into ADP IN _ _ _ _ _ 5 primary primary ADJ JJ Degree=Pos _ _ _ _ 6 erythroblasts erythroblast NOUN NNS Number=Plur _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 conditionally conditionally ADV RB _ _ _ _ _ 9 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 11 progenitors progenitor NOUN NNS Number=Plur _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 exogenous exogenous CCONJ CC _ _ _ _ _ 15 GATA GATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 2/ER 2/er PROPN NNP Number=Sing _ _ _ _ 18 promoted promote VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 23 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 estrogen estrogen NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 29 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 12493 # text = These phenotypic effects are specifically attributable to the action of ectopically expressed GATA-2/ER because erythroblasts expressing exogenous GATA-2 are constitutively arrested in differentiation and because erythroid progenitors expressing either Gal/ER or GATA-3/ER do not display a hormone-responsive block in differentiation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 phenotypic phenotypic ADJ JJ Degree=Pos _ _ _ _ 3 effects effect NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 specifically specifically ADV RB _ _ _ _ _ 6 attributable attributable ADJ JJ Degree=Pos _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 action action NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 ectopically ectopically ADV RB _ _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 GATA GATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2/ER 2/er PROPN NNP Number=Sing _ _ _ _ 16 because because SCONJ IN _ _ _ _ _ 17 erythroblasts erythroblast NOUN NNS Number=Plur _ _ _ _ 18 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 19 exogenous exogenous ADJ JJ Degree=Pos _ _ _ _ 20 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 constitutively constitutively ADV RB _ _ _ _ _ 25 arrested arrest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 because because SCONJ IN _ _ _ _ _ 30 erythroid erythroid NOUN NN Number=Sing _ _ _ _ 31 progenitors progenitor NOUN NNS Number=Plur _ _ _ _ 32 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 33 either either DET DT _ _ _ _ _ 34 Gal/ Gal/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 ER er NOUN NN Number=Sing _ _ _ _ 36 or or CCONJ CC _ _ _ _ _ 37 GATA GATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 -3/ER -3/er PROPN NNP Number=Sing _ _ _ _ 39 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 40 not not PART RB _ _ _ _ _ 41 display display VERB VB VerbForm=Inf _ _ _ _ 42 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 43 hormone hormone NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 46 block block NOUN NN Number=Sing _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 12494 # text = Thus, the GATA-2 transcription factor appears to play a role in regulating the self-renewal capacity of early erythroid progenitor cells. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 play play VERB VB VerbForm=Inf _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 role role NOUN NN Number=Sing _ _ _ _ 14 in in SCONJ IN _ _ _ _ _ 15 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 self self NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 renewal renewal ADJ JJ Degree=Pos _ _ _ _ 20 capacity capacity NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 early early ADJ JJ Degree=Pos _ _ _ _ 23 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 24 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12495 # text = Document 0030012999 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030012999 0030012999 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12496 # text = Phorbol ester reduces constitutive nuclear NF kappa B and inhibits HIV-1 production in mature human monocytic cells. 1 Phorbol Phorbol ADJ JJ Degree=Pos _ _ _ _ 2 ester ester NOUN NN Number=Sing _ _ _ _ 3 reduces reduce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ _ 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B B PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 inhibits inhibits VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 HIV Hiv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 production production NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 mature mature ADJ JJ Degree=Pos _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12497 # text = NF kappa B is a potent mediator of specific gene expression in human monocytes and has been shown to play a role in transcription of the HIV-1 genome in promonocytic leukemias. 1 NF NF PROPN NNP Number=Sing _ _ _ _ 2 kappa kappa PROPN NNP Number=Sing _ _ _ _ 3 B B PROPN NNP Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 potent potent NOUN NN Number=Sing _ _ _ _ 7 mediator mediator NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 specific specific ADJ JJ Degree=Pos _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 18 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 play play VERB VB VerbForm=Inf _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 role role NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 genome genome NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 33 leukemias leukemia NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 12498 # text = There is little information available on the response of NF kappa B to cytokines in normal human monocytes. 1 There there PRON EX _ _ _ _ _ 2 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 little little ADJ JJ Degree=Pos _ _ _ _ 4 information information NOUN NN Number=Sing _ _ _ _ 5 available available ADJ JJ Degree=Pos _ _ _ _ 6 on on ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 response response NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ _ 11 kappa kappa PROPN NNP Number=Sing _ _ _ _ 12 B b PROPN NNP Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 normal normal ADJ JJ Degree=Pos _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 12499 # text = We have used a 32P-labeled oligonucleotide derived from human immunodeficiency virus (HIV-1) long terminal repeat, which contains a tandem repeat of the NF kappa B binding sequence, as a probe in a gel retardation assay to study this transcription factor. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 32P 32p NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 labeled label VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 oligonucleotide oligonucleotide NOUN NN Number=Sing _ _ _ _ 9 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 13 virus virus NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 1 1 X LS _ _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 long long ADJ JJ Degree=Pos _ _ _ _ 20 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 21 repeat repeat NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 tandem tandem NOUN NN Number=Sing _ _ _ _ 27 repeat repeat NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 NF NF PROPN NNP Number=Sing _ _ _ _ 31 kappa kappa PROPN NNP Number=Sing _ _ _ _ 32 B b PROPN NNP Number=Sing _ _ _ _ 33 binding binde VERB VBG VerbForm=Ger _ _ _ _ 34 sequence sequence NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 as as ADP IN _ _ _ _ _ 37 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 probe probe NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 41 gel gel NOUN NN Number=Sing _ _ _ _ 42 retardation retardation NOUN NN Number=Sing _ _ _ _ 43 assay assay NOUN NN Number=Sing _ _ _ _ 44 to to PART TO _ _ _ _ _ 45 study study VERB VB VerbForm=Inf _ _ _ _ 46 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 47 transcription transcription NOUN NN Number=Sing _ _ _ _ 48 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 12500 # text = Using this assay, we have detected NF kappa B in extracts of nuclei from normal human monocytes. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 detected detect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 NF NF PROPN NNP Number=Sing _ _ _ _ 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 extracts extract NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 nuclei nuclei NOUN NNS Number=Plur _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 normal normal ADJ JJ Degree=Pos _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 12501 # text = Treatment of normal monocytes with 12-0-tetradecanoyl phorbol-13-acetate (TPA) for 4-24 h caused the complete disappearance of NF kappa B from nuclear extracts of monocytes. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 normal normal ADJ JJ Degree=Pos _ _ _ _ 4 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - SYM SYM _ _ _ _ SpaceAfter=No 8 0 0 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 tetradecanoyl tetradecanoyl NOUN NN Number=Sing _ _ _ _ 11 phorbol phorbol NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT : _ _ _ _ SpaceAfter=No 14 acetate acetate NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - SYM SYM _ _ _ _ SpaceAfter=No 21 24 24 NUM CD NumType=Card _ _ _ _ 22 h h X GW _ _ _ _ _ 23 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 complete complete ADJ JJ Degree=Pos _ _ _ _ 26 disappearance disappearance NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ _ 29 kappa kappa PROPN NNP Number=Sing _ _ _ _ 30 B B PROPN NNP Number=Sing _ _ _ _ 31 from from ADP IN _ _ _ _ _ 32 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 33 extracts extract NOUN NNS Number=Plur _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 12502 # text = A similar result was obtained with the mature monocytic leukemia cell line THP-1. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 similar similar ADJ JJ Degree=Pos _ _ _ _ 3 result result NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 obtained obtain VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 mature mature ADJ JJ Degree=Pos _ _ _ _ 9 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 10 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 line line NOUN NN Number=Sing _ _ _ _ 13 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 12503 # text = The constitutive transcription factor SP1 was unaffected by addition of TPA. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 SP1 Sp1 PROPN NNP Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 unaffected unaffect ADJ JJ Degree=Pos _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 addition addition NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 12504 # text = The disappearance of NF kappa B from the nucleus was concentration dependent between 10 and 50 ng/ml of phorbol ester. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 disappearance disappearance NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ _ 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B B PROPN NNP Number=Sing _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 10 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 11 concentration concentration NOUN NN Number=Sing _ _ _ _ 12 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 13 between between ADP IN _ _ _ _ _ 14 10 10 NUM CD NumType=Card _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 50 50 NUM CD NumType=Card _ _ _ _ 17 ng/ ng/ PUNCT HYPH _ _ _ _ SpaceAfter=No 18 ml ml NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 21 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 12505 # text = In THP-1 cells, TPA also induced a new, faster-migrating NF kappa B species not induced in monocytes. 1 In in ADP IN _ _ _ _ _ 2 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 TPA TPA PROPN NNP Number=Sing _ _ _ _ 8 also also ADV RB _ _ _ _ _ 9 induced induce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 new new ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 faster faster NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 migrating migrating VERB VBG VerbForm=Ger _ _ _ _ 16 NF Nf PROPN NNP Number=Sing _ _ _ _ 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B b ADJ JJ Degree=Pos _ _ _ _ 19 species species NOUN NNS Number=Plur _ _ _ _ 20 not not PART RB _ _ _ _ _ 21 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 12506 # text = Protein kinase C inhibitor staurosporine, but not cyclic nucleotide-dependent protein kinase inhibitor HA-1004, also dramatically reduced constitutive levels of nuclear NF kappa B. 1 Protein protein NOUN NN Number=Sing _ _ _ _ 2 kinase kinase NOUN NN Number=Sing _ _ _ _ 3 C C NOUN NN Number=Sing _ _ _ _ 4 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 5 staurosporine staurosporine NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 but but CCONJ CC _ _ _ _ _ 8 not not ADV RB _ _ _ _ _ 9 cyclic cyclic ADJ JJ Degree=Pos _ _ _ _ 10 nucleotide nucleotide ADV RB _ _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 kinase kinase NOUN NN Number=Sing _ _ _ _ 15 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 16 HA ha NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1004 1004 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 also also ADV RB _ _ _ _ _ 21 dramatically dramatically ADV RB _ _ _ _ _ 22 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 24 levels level NOUN NNS Number=Plur _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ _ 28 kappa kappa PROPN NNP Number=Sing _ _ _ _ 29 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 12507 # text = Finally, TPA addition to monocytes infected with HIV-1 inhibited HIV-1 replication, as determined by reverse transcriptase assays, in a concentration-dependent manner. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 TPA TPA DET DT Definite=Ind|PronType=Art _ _ _ _ 4 addition addition NOUN NN Number=Sing _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 7 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 1 1 NUM CD NumType=Card _ _ _ _ 16 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 as as SCONJ IN _ _ _ _ _ 19 determined determine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 reverse reverse ADJ JJ Degree=Pos _ _ _ _ 22 transcriptase transcriptase NOUN NN Number=Sing _ _ _ _ 23 assays assay NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 concentration concentration NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 30 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 12508 # text = These results are in striking contrast to the increase in nuclear NF kappa B and HIV-1 replication induced by phorbol esters in promonocytic leukemia cells U937 and HL-60, and emphasize the importance of studying cytokine regulation of HIV-1 in normal monocytes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 striking strik ADJ JJ Degree=Pos _ _ _ _ 6 contrast contrast NOUN NN Number=Sing _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 increase increase NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ _ 13 kappa kappa PROPN NNP Number=Sing _ _ _ _ 14 B B PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT , _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 replication replication NOUN NN Number=Sing _ _ _ _ 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 23 esters ester NOUN NNS Number=Plur _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 26 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ _ 28 U937 U937 NUM CD NumType=Card _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 HL Hl NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 60 60 NUM CD NumType=Card _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 emphasize emphasize VERB VB VerbForm=Inf _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 importance importance NOUN NN Number=Sing _ _ _ _ 38 of of SCONJ IN _ _ _ _ _ 39 studying study VERB VBG VerbForm=Ger _ _ _ _ 40 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 41 regulation regulation NOUN NN Number=Sing _ _ _ _ 42 of of ADP IN _ _ _ _ _ 43 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 1 1 NUM CD NumType=Card _ _ _ _ 46 in in ADP IN _ _ _ _ _ 47 normal normal ADJ JJ Degree=Pos _ _ _ _ 48 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12509 # text = Document 0030013016 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013016 0030013016 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12510 # text = Reactive oxygen intermediate-dependent NF-kappaB activation by interleukin-1beta requires 5-lipoxygenase or NADPH oxidase activity. 1 Reactive Reactive ADJ JJ Degree=Pos _ _ _ _ 2 oxygen oxygen ADJ JJ Degree=Pos _ _ _ _ 3 intermediate intermediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 interleukin interleukin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 12 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 beta beta NOUN NN Number=Sing _ _ _ _ 14 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 lipoxygenase lipoxygenase NOUN NN Number=Sing _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 NADPH NADPh DET DT _ _ _ _ _ 20 oxidase oxidase ADJ JJ Degree=Pos _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12511 # text = We previously reported that the role of reactive oxygen intermediates (ROIs) in NF-kappaB activation by proinflammatory cytokines was cell specific. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 previously previously ADV RB _ _ _ _ _ 3 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 role role NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 9 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 10 intermediates intermediate NOUN NNS Number=Plur _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 ROIs ROI NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 by by ADP IN _ _ _ _ _ 20 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 21 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 cell cell ADV RB Degree=Pos _ _ _ _ 24 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 12512 # text = However, the sources for ROIs in various cell types are yet to be determined and might include 5-lipoxygenase (5-LOX) and NADPH oxidase. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 sources source NOUN NNS Number=Plur _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 ROIs ROI NOUN NNS Number=Plur _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 various various ADJ JJ Degree=Pos _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 types type NOUN NNS Number=Plur _ _ _ _ 11 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 yet yet ADV RB _ _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 be be AUX VB VerbForm=Inf _ _ _ _ 15 determined determined VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 might might AUX MD VerbForm=Fin _ _ _ _ 18 include include VERB VB VerbForm=Inf _ _ _ _ 19 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 lipoxygenase lipoxygenase NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 5- 5- PUNCT , _ _ _ _ SpaceAfter=No 24 LOX LOX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 NADPH NADPH DET DT _ _ _ _ _ 28 oxidase oxidase NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 12513 # text = 5-LOX and 5-LOX activating protein (FLAP) are coexpressed in lymphoid cells but not in monocytic or epithelial cells. 1 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 LOX Lox NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 LOX Lox NOUN NN Number=Sing _ _ _ _ 8 activating activating NOUN NN Number=Sing _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 FLAP Flap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 coexpressed coexpress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 but but CCONJ CC _ _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 12514 # text = Stimulation of lymphoid cells with interleukin-1beta (IL-1beta) led to ROI production and NF-kappaB activation, which could both be blocked by antioxidants or FLAP inhibitors, confirming that 5-LOX was the source of ROIs and was required for NF-kappaB activation in these cells. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 beta beta NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 ROI ROI PROPN NNP Number=Sing _ _ _ _ 18 production production NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 which which PRON WDT PronType=Rel _ _ _ _ 26 could could AUX MD VerbForm=Fin _ _ _ _ 27 both both CCONJ CC _ _ _ _ _ 28 be be AUX VB VerbForm=Inf _ _ _ _ 29 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 by by ADP IN _ _ _ _ _ 31 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ _ 32 or or CCONJ CC _ _ _ _ _ 33 FLAP Flap NOUN NN Number=Sing _ _ _ _ 34 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 confirming confirm VERB VBG VerbForm=Ger _ _ _ _ 37 that that SCONJ IN _ _ _ _ _ 38 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 LOX LOX NOUN NN Number=Sing _ _ _ _ 41 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 source source NOUN NN Number=Sing _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 ROIs ROI NOUN NNS Number=Plur _ _ _ _ 46 and and CCONJ CC _ _ _ _ _ 47 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 48 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 49 for for ADP IN _ _ _ _ _ 50 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 53 activation activation NOUN NN Number=Sing _ _ _ _ 54 in in ADP IN _ _ _ _ _ 55 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 56 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 57 . . PUNCT . _ _ _ _ _ # sent_id = 12515 # text = IL-1beta stimulation of epithelial cells did not generate any ROIs and NF-kappaB induction was not influenced by 5-LOX inhibitors. 1 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 beta beta NOUN NN Number=Sing _ _ _ _ 4 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 not not PART RB _ _ _ _ _ 10 generate generate VERB VB VerbForm=Inf _ _ _ _ 11 any any DET DT _ _ _ _ _ 12 ROIs ROI NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 17 induction induction NOUN NN Number=Sing _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 influenced influence VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - SYM SYM _ _ _ _ SpaceAfter=No 24 LOX Lox NUM CD NumType=Card _ _ _ _ 25 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 12516 # text = However, reintroduction of a functional 5-LOX system in these cells allowed ROI production and 5-LOX-dependent NF-kappaB activation. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 reintroduction reintroduction NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 functional functional ADJ JJ Degree=Pos _ _ _ _ 7 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 LOX Lox NOUN NN Number=Sing _ _ _ _ 10 system system NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 allowed allow VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 ROI ROI PROPN NNP Number=Sing _ _ _ _ 16 production production NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 5- 5- SYM NFP _ _ _ _ SpaceAfter=No 19 LOX LOX PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 25 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 12517 # text = In monocytic cells, IL-1beta treatment led to a production of ROIs which is independent of the 5-LOX enzyme but requires the NADPH oxidase activity. 1 In in ADP IN _ _ _ _ _ 2 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 bet bet NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 treatment treatment NOUN NN Number=Sing _ _ _ _ 11 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 production production NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 ROIs ROI NOUN NNS Number=Plur _ _ _ _ 17 which which PRON WDT PronType=Rel _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 independent independent ADJ JJ Degree=Pos _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 LOX Lox NOUN NN Number=Sing _ _ _ _ 25 enzyme enzyme NOUN NN Number=Sing _ _ _ _ 26 but but CCONJ CC _ _ _ _ _ 27 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 NADPH NADPH ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 30 oxidase oxidase NOUN NN Number=Sing _ _ _ _ 31 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 12518 # text = This pathway involves the Rac1 and Cdc42 GTPases, two enzymes which are not required for NF-kappaB activation by IL-1beta in epithelial cells. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 pathway pathway NOUN NN Number=Sing _ _ _ _ 3 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 Rac1 rac1 NOUN NN Number=Sing _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 Cdc42 cdc42 NOUN NN Number=Sing _ _ _ _ 8 GTPases GTPase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 two two NUM CD NumType=Card _ _ _ _ 11 enzymes enzyme NOUN NNS Number=Plur _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT , _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 beta beta NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 12519 # text = In conclusion, three different cell-specific pathways lead to NF-kappaB activation by IL-1beta: a pathway dependent on ROI production by 5-LOX in lymphoid cells, an ROI- and 5-LOX-independent pathway in epithelial cells, and a pathway requiring ROI production by NADPH oxidase in monocytic cells. 1 In in ADP IN _ _ _ _ _ 2 conclusion conclusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 three three NUM CD NumType=Card _ _ _ _ 5 different different ADJ JJ Degree=Pos _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 specific specific ADJ JJ Degree=Pos _ _ _ _ 9 pathways pathway NOUN NNS Number=Plur _ _ _ _ 10 lead lead VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 -1 -1 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 : : PUNCT : _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 pathway pathway NOUN NN Number=Sing _ _ _ _ 23 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 ROI Roi NUM CD NumType=Card _ _ _ _ 26 production production NOUN NN Number=Sing _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 LOX Lox NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 ROI ROI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT , _ _ _ _ _ 38 and and CCONJ CC _ _ _ _ _ 39 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 LOX Lox NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 independent independent ADJ JJ Degree=Pos _ _ _ _ 44 pathway pathway NOUN NN Number=Sing _ _ _ _ 45 in in ADP IN _ _ _ _ _ 46 epithelial epithelial ADJ JJ Degree=Pos _ _ _ _ 47 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 51 pathway pathway NOUN NN Number=Sing _ _ _ _ 52 requiring require VERB VBG VerbForm=Ger _ _ _ _ 53 ROI Roi NUM CD NumType=Card _ _ _ _ 54 production production NOUN NN Number=Sing _ _ _ _ 55 by by ADP IN _ _ _ _ _ 56 NADPH NADPH DET DT _ _ _ _ _ 57 oxidase oxidase NOUN NN Number=Sing _ _ _ _ 58 in in ADP IN _ _ _ _ _ 59 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 60 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12520 # text = Document 0030013021 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013021 0030013021 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12521 # text = Expression of mRNA for the GATA-binding proteins in human eosinophils and basophils: potential role in gene transcription. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 binding bind VERB VBG VerbForm=Ger _ _ _ _ 9 proteins protein NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 basophils basophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 : : PUNCT : _ _ _ _ _ 16 potential potential ADJ JJ Degree=Pos _ _ _ _ 17 role role NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 gene gene ADJ JJ Degree=Pos _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12522 # text = The expression of the hematopoietic transcription factors GATA-1, GATA-2, and GATA-3 was studied in eosinophils and basophils. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 hematopoietic hematopoietic ADJ JJ Degree=Pos _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factors factor NOUN NNS Number=Plur _ _ _ _ 8 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 GATA GATA NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 3 3 NUM CD NumType=Card _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 studied study VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 basophils basophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 12523 # text = Eosinophils express mRNA for GATA-1, GATA-2, and GATA-3. 1 Eosinophils Eosinophils INTJ UH _ _ _ _ _ 2 express express VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 3 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 4 for for ADP IN _ _ _ _ _ 5 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 GATA GATA NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - SYM SYM _ _ _ _ SpaceAfter=No 16 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 12524 # text = Basophils express GATA-2 and GATA-3. 1 Basophils Basophil NOUN NNS Number=Plur _ _ _ _ 2 express express VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 GATA GATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 12525 # text = Treatment of HL-60 eosinophilic sublines with either interleukin-5 or butyric acid increased the expression of GATA-1 mRNA concomitant with the expression of eosinophil-specific genes, whereas levels of GATA-2 mRNA remained relatively constant. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HL HL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 60 60 NUM CD NumType=Card _ _ _ _ 6 eosinophilic eosinophilic ADJ JJ Degree=Pos _ _ _ _ 7 sublines subline NOUN NNS Number=Plur _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 either either DET DT _ _ _ _ _ 10 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 5 5 NUM CD NumType=Card _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 butyric butyric ADJ JJ Degree=Pos _ _ _ _ 15 acid acid NOUN NN Number=Sing _ _ _ _ 16 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 24 concomitant concomitant NOUN NN Number=Sing _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 expression expression NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 eosinophil eosinophil ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 specific specific ADJ JJ Degree=Pos _ _ _ _ 32 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 whereas whereas SCONJ IN _ _ _ _ _ 35 levels level NOUN NNS Number=Plur _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 2 2 NUM CD NumType=Card _ _ _ _ 40 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 41 remained remain VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 42 relatively relatively ADV RB _ _ _ _ _ 43 constant constant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 12526 # text = The presence of mRNA for these proteins in eosinophils and basophils suggests that gene transcription in these lineages may be regulated by GATA-binding proteins. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 presence presence NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 proteins protein NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 basophils basophil NOUN NNS Number=Plur _ _ _ _ 12 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 14 gene gene ADJ JJ Degree=Pos _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 18 lineages lineage NOUN NNS Number=Plur _ _ _ _ 19 may may AUX MD VerbForm=Fin _ _ _ _ 20 be be AUX VB VerbForm=Inf _ _ _ _ 21 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 GATA GATA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 binding bind VERB VBG VerbForm=Ger _ _ _ _ 26 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12527 # text = Document 0030013026 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013026 0030013026 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12528 # text = Human monocyte binding to fibronectin enhances IFN-gamma-induced early signaling events. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 3 binding bind VERB VBG VerbForm=Ger _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 fibronectin fibronectin VERB VB VerbForm=Inf _ _ _ _ 6 enhances enhance NOUN NNS Number=Plur _ _ _ _ 7 IFN- IFN- PUNCT : _ _ _ _ SpaceAfter=No 8 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 early early ADV RB Degree=Pos _ _ _ _ 12 signaling signale VERB VBG VerbForm=Ger _ _ _ _ 13 events event NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12529 # text = Leukocyte integrins are fundamentally important in modulating adhesion to extracellular matrix components and to other cells. 1 Leukocyte Leukocyte ADJ JJ Degree=Pos _ _ _ _ 2 integrins integrin NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 fundamentally fundamentally ADV RB _ _ _ _ _ 5 important important ADJ JJ Degree=Pos _ _ _ _ 6 in in SCONJ IN _ _ _ _ _ 7 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 8 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 11 matrix matrix NOUN NN Number=Sing _ _ _ _ 12 components component NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 other other ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 12530 # text = This integrin-mediated adhesion controls leukocyte arrest and extravasation during the onset of inflammatory responses. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 integrin- integrin- PUNCT : _ _ _ _ SpaceAfter=No 3 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 5 controls controls NOUN NN Number=Sing _ _ _ _ 6 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 7 arrest arrest NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 extravasation extravasation NOUN NN Number=Sing _ _ _ _ 10 during during ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 onset onset NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 15 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 12531 # text = Moreover, integrin-ligand interactions trigger signaling pathways that may influence leukocyte phenotype and function at sites of inflammation. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 integrin integrin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 ligand ligand NOUN NN Number=Sing _ _ _ _ 6 interactions interaction NOUN NNS Number=Plur _ _ _ _ 7 trigger trigger VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 signaling signal VERB VBG VerbForm=Ger _ _ _ _ 9 pathways pathway NOUN NNS Number=Plur _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 may may AUX MD VerbForm=Fin _ _ _ _ 12 influence influence VERB VB VerbForm=Inf _ _ _ _ 13 leukocyte leukocyte ADJ JJ Degree=Pos _ _ _ _ 14 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 function function NOUN NN Number=Sing _ _ _ _ 17 at at ADP IN _ _ _ _ _ 18 sites site NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 12532 # text = In the current studies, we evaluated the combinatorial effects of monocyte adhesion and IFN-gamma on intracellular signaling pathways. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 current current ADJ JJ Degree=Pos _ _ _ _ 4 studies study NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 evaluated evaluate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 combinatorial combinatorial ADJ JJ Degree=Pos _ _ _ _ 10 effects effect NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 13 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 gamma gamma NOUN NN Number=Sing _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 20 signaling signaling NOUN NN Number=Sing _ _ _ _ 21 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 12533 # text = IFN-gamma triggers a well-defined signal transduction pathway, which although not directly stimulated by monocyte adherence to fibronectin or arginine-glycine-aspartate (RGD)-coated substrata, was enhanced significantly in these matrix-adherent cells. 1 IFN Ifn ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 gamma gamma NOUN NN Number=Sing _ _ _ _ 4 triggers trigger NOUN NNS Number=Plur _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 well well ADV RB Degree=Pos _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 defined define VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 signal signal NOUN NN Number=Sing _ _ _ _ 10 transduction transduction NOUN NN Number=Sing _ _ _ _ 11 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 although although SCONJ IN _ _ _ _ _ 15 not not PART RB _ _ _ _ _ 16 directly directly ADV RB _ _ _ _ _ 17 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 20 adherence adherence NOUN NN Number=Sing _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 fibronectin fibronectin NOUN NN Number=Sing _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 arginine arginine NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 glycine glycine NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 aspartate aspartate NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 RGD RGD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 coated coate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 substrata substrata NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 37 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 significantly significantly ADV RB _ _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 41 matrix matrix NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 adherent adherent ADJ JJ Degree=Pos _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 12534 # text = Compared with monocytes in suspension or adherent on plastic surfaces, monocytes adherent to fibronectin or RGD exhibited a greater than threefold increase in steady state levels of IFN-gamma-induced mRNA for the high affinity Fc gammaRI receptor. 1 Compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 suspension suspension NOUN NN Number=Sing _ _ _ _ 6 or or CCONJ CC _ _ _ _ _ 7 adherent adherent NOUN NN Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 plastic plastic ADJ JJ Degree=Pos _ _ _ _ 10 surfaces surface NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 13 adherent adherent ADJ JJ Degree=Pos _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 fibronectin fibronectin VERB VB VerbForm=Inf _ _ _ _ 16 or or CCONJ CC _ _ _ _ _ 17 RGD RGD PROPN NNP Number=Sing _ _ _ _ 18 exhibited exhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 greater greater ADJ JJR Degree=Cmp _ _ _ _ 21 than than ADP IN _ _ _ _ _ 22 threefold threefold NOUN NN Number=Sing _ _ _ _ 23 increase increase NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 steady steady ADJ JJ Degree=Pos _ _ _ _ 26 state state NOUN NN Number=Sing _ _ _ _ 27 levels level NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 IFN- Ifn- NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 34 for for ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 high high ADJ JJ Degree=Pos _ _ _ _ 37 affinity affinity NOUN NN Number=Sing _ _ _ _ 38 Fc Fc PROPN NNP Number=Sing _ _ _ _ 39 gammaRI gammaRI PROPN NNP Number=Sing _ _ _ _ 40 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 12535 # text = By electrophoretic mobility shift assays, this increase in mRNA was associated with a 5- to 10-fold increase in the STAT1-containing DNA-binding complex that binds to Fc gammaRI promoter elements. 1 By by ADP IN _ _ _ _ _ 2 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 3 mobility mobility NOUN NN Number=Sing _ _ _ _ 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assays assay VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 increase increase NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 fold fold NOUN NN Number=Sing _ _ _ _ 21 increase increase NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 STAT1 stat1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 containing contain VERB VBG VerbForm=Ger _ _ _ _ 27 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 binding binding VERB VBG VerbForm=Ger _ _ _ _ 30 complex complex NOUN NN Number=Sing _ _ _ _ 31 that that PRON WDT PronType=Rel _ _ _ _ 32 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 Fc Fc PROPN NNP Number=Sing _ _ _ _ 35 gammaRI gammaRI PROPN NNP Number=Sing _ _ _ _ 36 promoter promoter NOUN NN Number=Sing _ _ _ _ 37 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 12536 # text = Furthermore, the tyrosine phosphorylation of STAT1 and the tyrosine kinases JAK1 and JAK2 was enhanced significantly in RGD-adherent monocytes compared with control cells. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 5 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 STAT1 stat1 PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 11 kinases kinase NOUN NNS Number=Plur _ _ _ _ 12 JAK1 JAK1 NUM CD NumType=Card _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 JAK2 JAK2 NOUN NN Number=Sing _ _ _ _ 15 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 16 enhanced enhance VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 significantly significantly ADV RB _ _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 RGD- RGD- SYM NFP _ _ _ _ SpaceAfter=No 20 adherent adherent ADJ JJ Degree=Pos _ _ _ _ 21 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 22 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 control control NOUN NN Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 12537 # text = These results suggest a novel mechanism by which integrin-mediated cell adhesion can modulate the magnitude of cytokine-induced signal transduction pathways, thereby amplifying cellular events leading to monocyte activation and inflammation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 novel novel NOUN NN Number=Sing _ _ _ _ 6 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 which which PRON WDT PronType=Rel _ _ _ _ 9 integrin- integrin- SYM SYM _ _ _ _ SpaceAfter=No 10 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 13 can can AUX MD VerbForm=Fin _ _ _ _ 14 modulate modulate VERB VB VerbForm=Inf _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 magnitude magnitude NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 signal signal NOUN NN Number=Sing _ _ _ _ 22 transduction transduction NOUN NN Number=Sing _ _ _ _ 23 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 thereby thereby ADV RB _ _ _ _ _ 26 amplifying amplify VERB VBG VerbForm=Ger _ _ _ _ 27 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 28 events event NOUN NNS Number=Plur _ _ _ _ 29 leading lead VERB VBG VerbForm=Ger _ _ _ _ 30 to to PART TO _ _ _ _ _ 31 monocyte monocyte VERB VB VerbForm=Inf _ _ _ _ 32 activation activation NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12538 # text = Document 0030013028 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013028 0030013028 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12539 # text = Repression by Ikaros and Aiolos is mediated through histone deacetylase complexes. 1 Repression Repression NOUN NN Number=Sing _ _ _ _ 2 by by ADP IN _ _ _ _ _ 3 Ikaros Ikaros PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 Aiolos Aiolos PROPN NNP Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 through through ADP IN _ _ _ _ _ 9 histone histone VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 deacetylase deacetylase NOUN NN Number=Sing _ _ _ _ 11 complexes complex NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12540 # text = Here we show that the lymphoid lineage-determining factors 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 lymphoid lymphoid NOUN NN Number=Sing _ _ _ _ 7 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 determining determine VERB VBG VerbForm=Ger _ _ _ _ 10 factors factor NOUN NNS Number=Plur _ _ _ _ # sent_id = 12541 # text = Ikaros and Aiolos can function as strong transcriptional repressors. 1 Ikaros Ikaros PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 Aiolos Aiolos PROPN NNP Number=Sing _ _ _ _ 4 can can AUX MD VerbForm=Fin _ _ _ _ 5 function function VERB VB VerbForm=Inf _ _ _ _ 6 as as ADP IN _ _ _ _ _ 7 strong strong ADJ JJ Degree=Pos _ _ _ _ 8 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 9 repressors repressor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 12542 # text = This function is mediated through two repression domains and is dependent upon the promoter context and cell type. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 function function NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 through through ADP IN _ _ _ _ _ 6 two two NUM CD NumType=Card _ _ _ _ 7 repression repression NOUN NN Number=Sing _ _ _ _ 8 domains domain NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 12 upon upon ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 promoter promoter NOUN NN Number=Sing _ _ _ _ 15 context context NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 12543 # text = Repression by Ikaros proteins correlates with hypo-acetylation of core histones at promoter sites and is relieved by histone deacetylase inhibitors. 1 Repression Repression NOUN NN Number=Sing _ _ _ _ 2 by by ADP IN _ _ _ _ _ 3 Ikaros Ikaros PROPN NNP Number=Sing _ _ _ _ 4 proteins proteins NOUN NNS Number=Plur _ _ _ _ 5 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 hypo-acetylation hypo-acetylation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 core core ADJ JJ Degree=Pos _ _ _ _ 10 histones histone NOUN NNS Number=Plur _ _ _ _ 11 at at ADP IN _ _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 sites site NOUN NNS Number=Plur _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 relieved relieve ADJ JJ Degree=Pos _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 histone histone PRON NN Number=Sing _ _ _ _ 19 deacetylase deacetylase ADJ JJ Degree=Pos _ _ _ _ 20 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 12544 # text = Consistent with these findings, Ikaros and its repression domains can interact in vivo and in vitro with the mSin3 family of co-repressors which bind to histone deacetylases. 1 Consistent consistent ADJ JJ Degree=Pos _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 findings finding NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 Ikaros Ikaros PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 9 repression repression NOUN NN Number=Sing _ _ _ _ 10 domains domain NOUN NNS Number=Plur _ _ _ _ 11 can can AUX MD VerbForm=Fin _ _ _ _ 12 interact interact VERB VB VerbForm=Inf _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 vivo vivo NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 vitro vitro NOUN NN Number=Sing _ _ _ _ 18 with with ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 mSin3 mSin3 NOUN NN Number=Sing _ _ _ _ 21 family family NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 co-repressors co-repressor NOUN NNS Number=Plur _ _ _ _ 24 which which PRON WDT PronType=Rel _ _ _ _ 25 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 histone histone VERB VB VerbForm=Inf _ _ _ _ 28 deacetylases deacetylase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 12545 # text = Based on these and our recent findings of associations between Ikaros and Mi-2-HDAC, we propose that Ikaros family members modulate gene expression during lymphocyte development by recruiting distinct histone deacetylase complexes to specific promoters. 1 Based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 on on ADP IN _ _ _ _ _ 3 these these PRON DT Number=Plur|PronType=Dem _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 6 recent recent ADJ JJ Degree=Pos _ _ _ _ 7 findings finding NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 associations association NOUN NNS Number=Plur _ _ _ _ 10 between between ADP IN _ _ _ _ _ 11 Ikaros Ikaros PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 Mi Mi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 -2 -2 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 HDAC Hdac NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 19 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 Ikaros Ikaros PROPN NNP Number=Sing _ _ _ _ 22 family family NOUN NN Number=Sing _ _ _ _ 23 members member NOUN NNS Number=Plur _ _ _ _ 24 modulate modulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 gene gene ADJ JJ Degree=Pos _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 during during ADP IN _ _ _ _ _ 28 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 29 development development NOUN NN Number=Sing _ _ _ _ 30 by by SCONJ IN _ _ _ _ _ 31 recruiting recruit VERB VBG VerbForm=Ger _ _ _ _ 32 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 33 histone histone NOUN NN Number=Sing _ _ _ _ 34 deacetylase deacetylase NOUN NN Number=Sing _ _ _ _ 35 complexes complex NOUN NNS Number=Plur _ _ _ _ 36 to to ADP IN _ _ _ _ _ 37 specific specific ADJ JJ Degree=Pos _ _ _ _ 38 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12546 # text = Document 0030013032 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013032 0030013032 NUM CD NumType=Card _ _ _ _ 3 ends. ends. NOUN NN Number=Sing _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12547 # text = Bcl-2-mediated drug resistance: inhibition of apoptosis by blocking nuclear factor of activated T lymphocytes (NFAT)-induced Fas ligand transcription. 1 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -2 -2 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT : _ _ _ _ SpaceAfter=No 4 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 drug drug NOUN NN Number=Sing _ _ _ _ 6 resistance resistance NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 : : PUNCT : _ _ _ _ _ 8 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 11 by by SCONJ IN _ _ _ _ _ 12 blocking blocke VERB VBG VerbForm=Ger _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 Fas Fa NOUN NNS Number=Plur _ _ _ _ 25 ligand ligand NUM CD NumType=Card _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12548 # text = Bcl-2 inhibits apoptosis induced by a variety of stimuli, including chemotherapy drugs and glucocorticoids. 1 Bcl Bcl NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 5 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 variety variety NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 including include VERB VBG VerbForm=Ger _ _ _ _ 14 chemotherapy chemotherapy NOUN NN Number=Sing _ _ _ _ 15 drugs drug NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 12549 # text = It is generally accepted that Bcl-2 exerts its antiapoptotic effects mainly by dimerizing with proapoptotic members of the Bcl-2 family such as Bax and Bad. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 generally generally ADV RB _ _ _ _ _ 4 accepted accept VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 exerts exert NOUN NNS Number=Plur _ _ _ _ 10 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 11 antiapoptotic antiapoptotic ADJ JJ Degree=Pos _ _ _ _ 12 effects effect NOUN NNS Number=Plur _ _ _ _ 13 mainly mainly ADV RB _ _ _ _ _ 14 by by SCONJ IN _ _ _ _ _ 15 dimerizing dimerize VERB VBG VerbForm=Ger _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 proapoptotic proapoptotic ADJ JJ Degree=Pos _ _ _ _ 18 members member NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ _ 24 family family NOUN NN Number=Sing _ _ _ _ 25 such such ADJ JJ Degree=Pos _ _ _ _ 26 as as ADP IN _ _ _ _ _ 27 Bax Bax PROPN NNP Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 Bad Bad PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 12550 # text = However, the mechanism of the antiapoptotic effects is unclear. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 antiapoptotic antiapoptotic ADJ JJ Degree=Pos _ _ _ _ 8 effects effect NOUN NNS Number=Plur _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 unclear unclear ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 12551 # text = Paclitaxel and other drugs that disturb microtubule dynamics kill cells in a Fas/Fas ligand (FasL)-dependent manner; antibody to FasL inhibits paclitaxel-induced apoptosis. 1 Paclitaxel Paclitaxel PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 other other ADJ JJ Degree=Pos _ _ _ _ 4 drugs drug NOUN NNS Number=Plur _ _ _ _ 5 that that PRON WDT PronType=Rel _ _ _ _ 6 disturb disturb VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 microtubule microtubule ADJ JJ Degree=Pos _ _ _ _ 8 dynamics dynamics NOUN NNS Number=Plur _ _ _ _ 9 kill kill VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 Fas Fas PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 / / PUNCT , _ _ _ _ SpaceAfter=No 15 Fas Fas PROPN NNP Number=Sing _ _ _ _ 16 ligand ligand NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 FasL FasL INTJ UH _ _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 22 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ; ; PUNCT , _ _ _ _ _ 24 antibody antibody PRON NN Number=Sing _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 FasL Fasl ADJ JJ Degree=Pos _ _ _ _ 27 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 28 paclitaxel paclitaxel NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 12552 # text = We have found that Bcl-2 overexpression leads to the prevention of chemotherapy (paclitaxel)-induced expression of FasL and blocks paclitaxel-induced apoptosis. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 overexpression overexpression NOUN NN Number=Sing _ _ _ _ 9 leads lead NOUN NNS Number=Plur _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 prevention prevention NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 chemotherapy chemotherapy NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 paclitaxel paclitaxel NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 FasL Fasl NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 blocks block NOUN NNS Number=Plur _ _ _ _ 25 paclitaxel paclitaxel NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 apoptosis apoptosis NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 12553 # text = The mechanism of this effect is that Bcl-2 prevents the nuclear translocation of NFAT (nuclear factor of activated T lymphocytes, a transcription factor activated by microtubule damage) by binding and sequestering calcineurin, a calcium-dependent phosphatase that must dephosphorylate NFAT to move to the nucleus. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 prevents prevent NOUN NNS Number=Plur _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 translocation translocation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 T t NOUN NN Number=Sing _ _ _ _ 23 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 transcription transcription NOUN NN Number=Sing _ _ _ _ 27 factor factor NOUN NN Number=Sing _ _ _ _ 28 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 microtubule microtubule ADJ JJ Degree=Pos _ _ _ _ 31 damage damage NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 by by SCONJ IN _ _ _ _ _ 34 binding bind VERB VBG VerbForm=Ger _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 sequestering sequester VERB VBG VerbForm=Ger _ _ _ _ 37 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 40 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 43 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 44 that that PRON WDT PronType=Rel _ _ _ _ 45 must must AUX MD VerbForm=Fin _ _ _ _ 46 dephosphorylate dephosphorylate VERB VB VerbForm=Inf _ _ _ _ 47 NFAT NFAT PROPN NNP Number=Sing _ _ _ _ 48 to to PART TO _ _ _ _ _ 49 move move VERB VB VerbForm=Inf _ _ _ _ 50 to to ADP IN _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 12554 # text = Without NFAT nuclear translocation, the FasL gene is not transcribed. 1 Without without ADP IN _ _ _ _ _ 2 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 3 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 4 translocation translocation NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 FasL Fasl ADJ JJ Degree=Pos _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 transcribed transcribe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 12555 # text = Thus, it appears that paclitaxel and other drugs that disturb microtubule function kill cells at least in part through the induction of FasL. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 4 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 paclitaxel paclitaxel NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 other other ADJ JJ Degree=Pos _ _ _ _ 9 drugs drug NOUN NNS Number=Plur _ _ _ _ 10 that that PRON WDT PronType=Rel _ _ _ _ 11 disturb disturb VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 microtubule microtubule ADJ JJ Degree=Pos _ _ _ _ 13 function function NOUN NN Number=Sing _ _ _ _ 14 kill kill NOUN NN Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 at at ADV RB _ _ _ _ _ 17 least least ADV RBS Degree=Sup _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 part part NOUN NN Number=Sing _ _ _ _ 20 through through ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 induction induction NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 FasL FasL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 12556 # text = Furthermore, Bcl-2 antagonizes drug-induced apoptosis by inhibiting calcineurin activation, blocking NFAT nuclear translocation, and preventing FasL expression. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 antagonizes antagonize NOUN NNS Number=Plur _ _ _ _ 7 drug drug NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 11 by by SCONJ IN _ _ _ _ _ 12 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 13 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 blocking block VERB VBG VerbForm=Ger _ _ _ _ 17 NFAT Nfat PRON WP PronType=Int _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 translocation translocation NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 preventing prevent VERB VBG VerbForm=Ger _ _ _ _ 23 FasL Fasl ADJ JJ Degree=Pos _ _ _ _ 24 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 12557 # text = The effects of Bcl-2 can be overcome, at least partially, through phosphorylation of Bcl-2. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 can can AUX MD VerbForm=Fin _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 overcome overcome VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 at at ADV RB _ _ _ _ _ 12 least least ADV RBS Degree=Sup _ _ _ _ 13 partially partially ADV RB _ _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 through through ADP IN _ _ _ _ _ 16 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 12558 # text = Phosphorylated Bcl-2 cannot bind calcineurin, and NFAT activation, FasL expression, and apoptosis can occur after Bcl-2 phosphorylation. 1 Phosphorylated Phosphorylate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 2 2 NUM CD NumType=Card _ _ _ _ 5 can can AUX MD VerbForm=Fin _ _ _ SpaceAfter=No 6 not not PART RB _ _ _ _ _ 7 bind bind VERB VB VerbForm=Inf _ _ _ _ 8 calcineurin calcineurin NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 FasL Fasl ADJ JJ Degree=Pos _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 19 can can AUX MD VerbForm=Fin _ _ _ _ 20 occur occur VERB VB VerbForm=Inf _ _ _ _ 21 after after ADP IN _ _ _ _ _ 22 Bcl Bcl PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 2 2 NUM CD NumType=Card _ _ _ _ 25 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12559 # text = Document 0030013033 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013033 0030013033 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12560 # text = NF-kappaB activation is a critical regulator of human granulocyte apoptosis in vitro. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 critical critical ADJ JJ Degree=Pos _ _ _ _ 8 regulator regulator NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 granulocyte granulocyte NOUN NN Number=Sing _ _ _ _ 12 apoptosis apoptosis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12561 # text = During beneficial inflammation, potentially tissue-damaging granulocytes undergo apoptosis before being cleared by phagocytes in a non-phlogistic manner. 1 During during ADP IN _ _ _ _ _ 2 beneficial beneficial ADJ JJ Degree=Pos _ _ _ _ 3 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 potentially potentially ADV RB _ _ _ _ _ 6 tissue tissue VERB VB Mood=Imp|VerbForm=Fin _ _ _ SpaceAfter=No 7 -damaging -damage VERB VBG VerbForm=Ger _ _ _ _ 8 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ _ 9 undergo undergo ADJ JJ Degree=Pos _ _ _ _ 10 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 11 before before SCONJ IN _ _ _ _ _ 12 being be AUX VBG VerbForm=Ger _ _ _ _ 13 cleared cleare VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 phagocytes phagocyte NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 non-phlogistic non-phlogistic ADJ JJ Degree=Pos _ _ _ _ 19 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 12562 # text = Here we show that the rate of constitutive apoptosis in human neutrophils and eosinophils is greatly accelerated in both a rapid and concentration-dependent manner by the fungal metabolite gliotoxin, but not by its inactive analog methylthiogliotoxin. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 rate rate NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 9 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 eosinophils eosinophil NOUN NNS Number=Plur _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 greatly greatly ADV RB _ _ _ _ _ 17 accelerated accelerate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 both both DET DT _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 rapid rapid NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 concentration concentration NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 26 manner manner NOUN NN Number=Sing _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 fungal fungal ADJ JJ Degree=Pos _ _ _ _ 30 metabolite metabolite NOUN NN Number=Sing _ _ _ _ 31 gliotoxin gliotoxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 but but CCONJ CC _ _ _ _ _ 34 not not ADV RB _ _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 37 inactive inactive ADJ JJ Degree=Pos _ _ _ _ 38 analog analog NOUN NN Number=Sing _ _ _ _ 39 methylthiogliotoxin methylthiogliotoxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 12563 # text = This induction of apoptosis was abolished by the caspase inhibitor zVAD-fmk, correlated with the inhibition of nuclear factor-kappa B (NF-kappaB), and was mimicked by a cell permeable inhibitory peptide of NF-kappaB, SN-50; other NF-kappaB inhibitors, curcumin and pyrrolidine dithiocarbamate; and the proteasome inhibitor, MG-132. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 abolished abolish VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 caspase caspase NOUN NN Number=Sing _ _ _ _ 10 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 11 zVAD zvad NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 fmk fmk NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 with with ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappa kappa NOUN NN Number=Sing _ _ _ _ 24 B b NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 , , PUNCT , _ _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 was be AUX VBD Mood=Ind|Number=Sing|Person=1|Tense=Past|VerbForm=Fin _ _ _ _ 33 mimicked mimick VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 34 by by ADP IN _ _ _ _ _ 35 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 cell cell NOUN NN Number=Sing _ _ _ _ 37 permeable permeable ADJ JJ Degree=Pos _ _ _ _ 38 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 39 peptide peptide NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 SN SN PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT , _ _ _ _ SpaceAfter=No 47 50 50 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 ; ; PUNCT , _ _ _ _ _ 49 other other ADJ JJ Degree=Pos _ _ _ _ 50 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 53 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 54 , , PUNCT , _ _ _ _ _ 55 curcumin curcumin NOUN NNS Number=Plur _ _ _ _ 56 and and CCONJ CC _ _ _ _ _ 57 pyrrolidine pyrrolidine NOUN NN Number=Sing _ _ _ _ 58 dithiocarbamate dithiocarbamate NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 ; ; PUNCT , _ _ _ _ _ 60 and and CCONJ CC _ _ _ _ _ 61 the the DET DT Definite=Def|PronType=Art _ _ _ _ 62 proteasome proteasome ADJ JJ Degree=Pos _ _ _ _ 63 inhibitor inhibitor NOUN NN Number=Sing _ _ _ SpaceAfter=No 64 , , PUNCT , _ _ _ _ _ 65 MG MG NOUN NN Number=Sing _ _ _ SpaceAfter=No 66 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 67 132 132 NUM CD NumType=Card _ _ _ SpaceAfter=No 68 . . PUNCT . _ _ _ _ _ # sent_id = 12564 # text = Gliotoxin also augmented dramatically the early (2-6 1 Gliotoxin Gliotoxin PROPN NNP Number=Sing _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 augmented augment VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 dramatically dramatically ADV RB _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 early early ADJ JJ Degree=Pos _ _ _ _ 7 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 - - SYM SYM _ _ _ _ SpaceAfter=No 10 6 6 NUM CD NumType=Card _ _ _ _ # sent_id = 12565 # text = h) pro-apoptotic effects of tumor necrosis factor-alpha (TNF-alpha) in neutrophils and unmasked the ability of TNF-alpha to induce eosinophil apoptosis. 1 h h INTJ UH _ _ _ _ SpaceAfter=No 2 ) ) PUNCT -RRB- _ _ _ _ _ 3 pro-apoptotic pro-apoptotic ADJ JJ Degree=Pos _ _ _ _ 4 effects effect NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 tumor tumor NOUN NN Number=Sing _ _ _ _ 7 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 TNF Tnf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 alpha alpha X FW Foreign=Yes _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 unmasked unmask VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 ability ability NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 alpha alpha NOUN NN Number=Sing _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 induce induce VERB VB VerbForm=Inf _ _ _ _ 28 eosinophil eosinophil ADP IN _ _ _ _ _ 29 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 12566 # text = In neutrophils, TNF-alpha caused a gliotoxin-inhibitable activation of an inducible form of NF-kappaB, a response that may underlie the ability of TNF-alpha to delay apoptosis at later times (12-24 h) and limit its early killing effect. 1 In in ADP IN _ _ _ _ _ 2 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 alpha alpha PROPN NNP Number=Sing _ _ _ _ 7 caused cause VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 gliotoxin gliotoxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 inhibitable inhibitable ADJ JJ Degree=Pos _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 16 form form NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 response response NOUN NN Number=Sing _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 may may AUX MD VerbForm=Fin _ _ _ _ 26 underlie underlie VERB VB VerbForm=Inf _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 ability ability NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 alpha alpha NOUN NN Number=Sing _ _ _ _ 33 to to PART TO _ _ _ _ _ 34 delay delay VERB VB VerbForm=Inf _ _ _ _ 35 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 36 at at ADP IN _ _ _ _ _ 37 later later ADJ JJR Degree=Cmp _ _ _ _ 38 times time NOUN NNS Number=Plur _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 - - SYM SYM _ _ _ _ SpaceAfter=No 42 24 24 NUM CD NumType=Card _ _ _ _ 43 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 ) ) PUNCT -RRB- _ _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 limit limit VERB VB VerbForm=Inf _ _ _ _ 47 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 48 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 49 early early ADV RB Degree=Pos _ _ _ _ 50 killing kill VERB VBG VerbForm=Ger _ _ _ _ 51 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 12567 # text = Furthermore, cycloheximide displayed a similar capacity to enhance TNF-alpha induced neutrophil apoptosis even at time points when cycloheximide alone had no pro-apoptotic effect, suggesting that NF-kappaB may regulate the production of protein(s) which protect neutrophils from the cytotoxic effects of TNF-alpha. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 cycloheximide cycloheximide NOUN NN Number=Sing _ _ _ _ 4 displayed display VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 similar similar ADJ JJ Degree=Pos _ _ _ _ 7 capacity capacity NOUN NN Number=Sing _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 enhance enhance VERB VB VerbForm=Inf _ _ _ _ 10 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 alpha alpha NOUN NN Number=Sing _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 15 apoptosis apoptosis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 even even ADV RB _ _ _ _ _ 17 at at ADP IN _ _ _ _ _ 18 time time NOUN NN Number=Sing _ _ _ _ 19 points point NOUN NNS Number=Plur _ _ _ _ 20 when when ADV WRB PronType=Int _ _ _ _ 21 cycloheximide cycloheximide ADJ JJ Degree=Pos _ _ _ _ 22 alone alone ADV RB _ _ _ _ _ 23 had have VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 24 no no DET DT _ _ _ _ _ 25 pro-apoptotic pro-apoptotic ADJ JJ Degree=Pos _ _ _ _ 26 effect effect NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 29 that that SCONJ IN _ _ _ _ _ 30 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 33 may may AUX MD VerbForm=Fin _ _ _ _ 34 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 production production NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 s s X AFX _ _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 which which PRON WDT PronType=Rel _ _ _ _ 43 protect protect VERB VB VerbForm=Inf _ _ _ _ 44 neutrophils neutrophil NOUN NNS Number=Plur _ _ _ _ 45 from from ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 cytotoxic cytotoxic ADJ JJ Degree=Pos _ _ _ _ 48 effects effect NOUN NNS Number=Plur _ _ _ _ 49 of of ADP IN _ _ _ _ _ 50 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 12568 # text = These data shed light on the biochemical and molecular mechanisms regulating human granulocyte apoptosis and, in particular, indicate that the transcription factor NF-kappaB plays a crucial role in regulating the physiological cell death pathway in granulocytes. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 shed sh VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 light light NOUN NN Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 10 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 11 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 granulocyte granulocyte NOUN NN Number=Sing _ _ _ _ 14 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 particular particular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 indicate indicate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 21 that that SCONJ IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 28 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 31 role role NOUN NN Number=Sing _ _ _ _ 32 in in SCONJ IN _ _ _ _ _ 33 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 physiological physiological ADJ JJ Degree=Pos _ _ _ _ 36 cell cell NOUN NN Number=Sing _ _ _ _ 37 death death NOUN NN Number=Sing _ _ _ _ 38 pathway pathway NOUN NN Number=Sing _ _ _ _ 39 in in ADP IN _ _ _ _ _ 40 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12569 # text = Document 0030013034 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013034 0030013034 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12570 # text = Tissue and cell-type specific expression of the tuberous sclerosis gene, TSC2, in human tissues. 1 Tissue Tissue NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 type type NOUN NN Number=Sing _ _ _ _ 6 specific specific ADJ JJ Degree=Pos _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 tuberous tuberous ADJ JJ Degree=Pos _ _ _ _ 11 sclerosis sclerosis NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 TSC2 TSC2 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12571 # text = TSC2 is a gene on chromosome 16p13.3 associated with the autosomal dominant neurocutaneous disorder, tuberous sclerosis complex (TSC). 1 TSC2 Tsc2 NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 chromosome chromosome DET DT _ _ _ _ _ 7 16p13.3 16p13.3 NOUN NN Number=Sing _ _ _ _ 8 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 autosomal autosomal ADJ JJ Degree=Pos _ _ _ _ 12 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 13 neurocutaneous neurocutaneous ADJ JJ Degree=Pos _ _ _ _ 14 disorder disorder NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 tuberous tuberous ADJ JJ Degree=Pos _ _ _ _ 17 sclerosis sclerosis NOUN NN Number=Sing _ _ _ _ 18 complex complex NOUN NN Number=Sing _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 TSC TSC NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 12572 # text = By using a partial nucleotide sequence from the cloned TSC2 and polymerase chain reaction methodology, we constructed a digoxigenin-labeled complementary DNA probe to examine TSC2 gene expression in autopsy- or biopsy-derived human tissues by in situ hybridization. 1 By by SCONJ IN _ _ _ _ _ 2 using use VERB VBG VerbForm=Ger _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 partial partial ADJ JJ Degree=Pos _ _ _ _ 5 nucleotide nucleotide NOUN NN Number=Sing _ _ _ _ 6 sequence sequence NOUN NN Number=Sing _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 cloned cloned VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 TSC2 Tsc2 NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 13 chain chain NOUN NN Number=Sing _ _ _ _ 14 reaction reaction NOUN NN Number=Sing _ _ _ _ 15 methodology methodology NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 18 constructed construct VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 digoxigenin digoxigenin NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 labeled labele VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 complementary complementary ADJ JJ Degree=Pos _ _ _ _ 24 DNA dna NOUN NN Number=Sing _ _ _ _ 25 probe probe NOUN NN Number=Sing _ _ _ _ 26 to to PART TO _ _ _ _ _ 27 examine examine VERB VB VerbForm=Inf _ _ _ _ 28 TSC2 TSC2 NUM CD NumType=Card _ _ _ _ 29 gene gene NOUN NN Number=Sing _ _ _ _ 30 expression expression NOUN NN Number=Sing _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 autopsy autopsy ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ _ 34 or or CCONJ CC _ _ _ _ _ 35 biopsy biopsy NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 38 human human ADJ JJ Degree=Pos _ _ _ _ 39 tissues tissue NOUN NNS Number=Plur _ _ _ _ 40 by by ADP IN _ _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 situ situ NOUN NN Number=Sing _ _ _ _ 43 hybridization hybridization NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 12573 # text = TSC2 messenger RNA was widely expressed in various cell types throughout the body, including epithelia, lymphocytes, and cells with endocrine functions, e.g., adrenal cortex and anterior pituitary. 1 TSC2 TSC2 NUM CD NumType=Card _ _ _ _ 2 messenger messenger NOUN NN Number=Sing _ _ _ _ 3 RNA RNA PROPN NNP Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 widely widely ADV RB _ _ _ _ _ 6 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 various various ADJ JJ Degree=Pos _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ _ 10 types type NOUN NNS Number=Plur _ _ _ _ 11 throughout throughout ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 body body NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 including include VERB VBG VerbForm=Ger _ _ _ _ 16 epithelia epithelion NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 endocrine endocrine NOUN NN Number=Sing _ _ _ _ 24 functions function NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 e.g. e.g. X FW _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 adrenal adrenal ADJ JJ Degree=Pos _ _ _ _ 29 cortex cortex NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 anterior anterior ADJ JJ Degree=Pos _ _ _ _ 32 pituitary pituitary NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 12574 # text = It was prominently and selectively (within the central nervous system) expressed in pyramidal cells of the cerebral cortex and other motor neurons, e.g., in spinal cord and brainstem nuclei. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 prominently prominently ADV RB _ _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 selectively selectively ADV RB _ _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 within within ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 central central ADJ JJ Degree=Pos _ _ _ _ 10 nervous nervous ADJ JJ Degree=Pos _ _ _ _ 11 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 pyramidal pyramidal ADJ JJ Degree=Pos _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 cerebral cerebral ADJ JJ Degree=Pos _ _ _ _ 20 cortex cortex NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 other other ADJ JJ Degree=Pos _ _ _ _ 23 motor motor NOUN NN Number=Sing _ _ _ _ 24 neurons neuron NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 e.g. e.g. X FW _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 spinal spinal ADJ JJ Degree=Pos _ _ _ _ 30 cord cord NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 brainstem brainstem NOUN NN Number=Sing _ _ _ _ 33 nuclei nuclei NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 12575 # text = Visceral TSC2 expression was comparable in autopsy tissues from patients with and without TSC; TSC2 messenger RNA expression was most prominent in cells with a rapid mitotic rate and turnover, e.g., epithelia and lymphocytes, with central nervous system pyramidal cells and other neurons being an obvious exception, and/or in cells with important secretory/transport functions. 1 Visceral Visceral ADJ JJ Degree=Pos _ _ _ _ 2 TSC2 Tsc2 NUM CD NumType=Card _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 comparable comparable ADJ JJ Degree=Pos _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 autopsy autopsy ADJ JJ Degree=Pos _ _ _ _ 8 tissues tissue NOUN NNS Number=Plur _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 patients patient NOUN NNS Number=Plur _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 without without ADP IN _ _ _ _ _ 14 TSC Tsc NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 ; ; PUNCT , _ _ _ _ _ 16 TSC2 TSC2 NUM CD NumType=Card _ _ _ _ 17 messenger messenger NOUN NN Number=Sing _ _ _ _ 18 RNA RNa SYM SYM _ _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 21 most most ADV RBS _ _ _ _ _ 22 prominent prominent ADJ JJ Degree=Pos _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 28 mitotic mitotic ADJ JJ Degree=Pos _ _ _ _ 29 rate rate NOUN NN Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 turnover turnover NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 e.g. e.g. X FW _ _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 epithelia epithelia NOUN NN Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 with with ADP IN _ _ _ _ _ 40 central central ADJ JJ Degree=Pos _ _ _ _ 41 nervous nervous ADJ JJ Degree=Pos _ _ _ _ 42 system system NOUN NN Number=Sing _ _ _ _ 43 pyramidal pyramidal ADJ JJ Degree=Pos _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 other other ADJ JJ Degree=Pos _ _ _ _ 47 neurons neuron NOUN NNS Number=Plur _ _ _ _ 48 being be AUX VBG VerbForm=Ger _ _ _ _ 49 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 50 obvious obvious ADJ JJ Degree=Pos _ _ _ _ 51 exception exception NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 and and CCONJ CC _ _ _ _ SpaceAfter=No 54 / / PUNCT , _ _ _ _ SpaceAfter=No 55 or or CCONJ CC _ _ _ _ _ 56 in in ADP IN _ _ _ _ _ 57 cells cell NOUN NNS Number=Plur _ _ _ _ 58 with with ADP IN _ _ _ _ _ 59 important important ADJ JJ Degree=Pos _ _ _ _ 60 secretory secretory NOUN NN Number=Sing _ _ _ SpaceAfter=No 61 / / PUNCT , _ _ _ _ SpaceAfter=No 62 transport transport NOUN NN Number=Sing _ _ _ _ 63 functions function NOUN NNS Number=Plur _ _ _ SpaceAfter=No 64 . . PUNCT . _ _ _ _ _ # sent_id = 12576 # text = This widespread expression of the TSC2 gene supports the view that it encodes a protein vital to cell growth and metabolism or one that functions as a tumor/growth suppressor. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 widespread widespread ADJ JJ Degree=Pos _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 TSC2 Tsc2 NOUN NN Number=Sing _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 supports support VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 view view NOUN NN Number=Sing _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 13 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 vital vital ADJ JJ Degree=Pos _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 cell cell VERB VB VerbForm=Inf _ _ _ _ 19 growth growth NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 metabolism metabolism NOUN NN Number=Sing _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 one one NUM CD NumType=Card _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 functions function VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 as as ADP IN _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 tumor tumor NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 / / PUNCT , _ _ _ _ SpaceAfter=No 30 growth growth NOUN NN Number=Sing _ _ _ _ 31 suppressor suppressor NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12577 # text = Document 0030013035 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013035 0030013035 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12578 # text = Retinoid X receptor and c-cerbA/thyroid hormone receptor regulate erythroid cell growth and differentiation. 1 Retinoid Retinoid VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 X x ADP IN _ _ _ _ _ 3 receptor receptor NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 c- c- SYM NFP _ _ _ _ SpaceAfter=No 6 cerbA cerba SYM SYM _ _ _ _ SpaceAfter=No 7 / / SYM SYM _ _ _ _ SpaceAfter=No 8 thyroid thyroid NOUN NN Number=Sing _ _ _ _ 9 hormone hormone NOUN NN Number=Sing _ _ _ _ 10 receptor receptor NOUN NN Number=Sing _ _ _ _ 11 regulate regulate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 12 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 growth growth NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12579 # text = Nuclear receptors are important regulators of erythroid cell development. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 receptors receptor NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 important important ADJ JJ Degree=Pos _ _ _ _ 5 regulators regulator NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 12580 # text = Here we investigated the impact of retinoid X receptor (RXR), retinoic acid receptor (RAR), and of the c-erbA/thyroid hormone (T3) receptor (c-erbA/TR) on growth and differentiation of erythroid cells using an in vitro culture system of stem cell factor-dependent erythroid progenitors. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 impact impact NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 retinoid retinoid ADJ JJ Degree=Pos _ _ _ _ 8 X x NOUN NN Number=Sing _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 RXR RXR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 15 acid acid ADJ JJ Degree=Pos _ _ _ _ 16 receptor receptor NOUN NN Number=Sing _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 RAR RAR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 c- c- SYM NFP _ _ _ _ SpaceAfter=No 25 erbA erbA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 / / PUNCT , _ _ _ _ SpaceAfter=No 27 thyroid thyroid NOUN NN Number=Sing _ _ _ _ 28 hormone hormone NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 T3 T3 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 receptor receptor NOUN NN Number=Sing _ _ _ _ 33 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 34 c- c- SYM NFP _ _ _ _ SpaceAfter=No 35 erbA erbA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 / / PUNCT , _ _ _ _ SpaceAfter=No 37 TR TR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ _ 39 on on ADP IN _ _ _ _ _ 40 growth growth NOUN NN Number=Sing _ _ _ _ 41 and and CCONJ CC _ _ _ _ _ 42 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 45 cells cell NOUN NNS Number=Plur _ _ _ _ 46 using use VERB VBG VerbForm=Ger _ _ _ _ 47 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 50 culture culture NOUN NN Number=Sing _ _ _ _ 51 system system NOUN NN Number=Sing _ _ _ _ 52 of of ADP IN _ _ _ _ _ 53 stem stem NOUN NN Number=Sing _ _ _ _ 54 cell cell NOUN NN Number=Sing _ _ _ _ 55 factor-dependent factor-dependent ADJ JJ Degree=Pos _ _ _ _ 56 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 57 progenitors progenitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 58 . . PUNCT . _ _ _ _ _ # sent_id = 12581 # text = RXR, RAR, and c-erbA/TR-specific ligands were found to induce erythroid-specific gene expression and to accelerate erythroid differentiation in culture, with T3 being most effective. 1 RXR RXR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 RAR RAR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 c- c- SYM NFP _ _ _ _ SpaceAfter=No 7 erbA/TR-specific erbA/TR-specific ADJ JJ Degree=Pos _ _ _ _ 8 ligands ligand NOUN NNS Number=Plur _ _ _ _ 9 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 induce induce VERB VB VerbForm=Inf _ _ _ _ 13 erythroid erythroid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 specific specific ADJ JJ Degree=Pos _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 to to PART TO _ _ _ _ _ 20 accelerate accelerate VERB VB VerbForm=Inf _ _ _ _ 21 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 22 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 culture culture NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 with with SCONJ IN _ _ _ _ _ 27 T3 T3 NOUN NN Number=Sing _ _ _ _ 28 being be AUX VBG VerbForm=Ger _ _ _ _ 29 most most ADV RBS _ _ _ _ _ 30 effective effective ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 12582 # text = Furthermore, while ligand-activated c-erbA/TR accelerated differentiation, unliganded c-erbA/TR effectively blocked differentiation and supported sustained progenitor growth in culture. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 while while SCONJ IN _ _ _ _ _ 4 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 c- c- SYM NFP _ _ _ _ SpaceAfter=No 8 erbA/TR erba/tr ADV RBR Degree=Cmp _ _ _ _ 9 accelerated accelerate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 unliganded unliganded ADJ JJ Degree=Pos _ _ _ _ 13 c- c- SYM NFP _ _ _ _ SpaceAfter=No 14 erbA/TR erbA/TR ADV RBR Degree=Cmp _ _ _ _ 15 effectively effectively ADV RB _ _ _ _ _ 16 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 supported support VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 sustained sustain ADJ JJ Degree=Pos _ _ _ _ 21 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 22 growth growth NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 culture culture NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 12583 # text = Thus, c-erbA/TR appears to act as a binary switch affecting erythroid cell fate: unliganded c-erbA/TR supports growth while ligand-activated c-erbA/TR induces differentiation. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 c- c- SYM NFP _ _ _ _ SpaceAfter=No 4 erbA/TR erbA/TR PROPN NNP Number=Sing _ _ _ _ 5 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 act act VERB VB VerbForm=Inf _ _ _ _ 8 as as ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 binary binary NOUN NN Number=Sing _ _ _ _ 11 switch switch NOUN NN Number=Sing _ _ _ _ 12 affecting affect VERB VBG VerbForm=Ger _ _ _ _ 13 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 fate fate NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 : : PUNCT : _ _ _ _ _ 17 unliganded unliganded ADJ JJ Degree=Pos _ _ _ _ 18 c-erbA/TR c-erba/tr NOUN NN Number=Sing _ _ _ _ 19 supports support NOUN NNS Number=Plur _ _ _ _ 20 growth growth NOUN NN Number=Sing _ _ _ _ 21 while while SCONJ IN _ _ _ _ _ 22 ligand ligand NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 c- c- SYM NFP _ _ _ _ SpaceAfter=No 26 erbA/TR erba/tr ADJ JJR Degree=Cmp _ _ _ _ 27 induces induce NOUN NNS Number=Plur _ _ _ _ 28 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 12584 # text = Additionally, to determine the impact of RXR for erythroid cell development, dominant interfering mutant RXRs, lacking the transcriptional activator functions AF-1 and AF-2, or AF-2 only, or the entire DNA-binding domain, were introduced into erythroid progenitor cells via recombinant retrovirus vectors and analyzed for RXR-specific effects. 1 Additionally additionally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 to to PART TO _ _ _ _ _ 4 determine determine VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 impact impact NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 RXR Rxr PROPN NNP Number=Sing _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 dominant dominant NOUN NN Number=Sing _ _ _ _ 15 interfering interfere VERB VBG VerbForm=Ger _ _ _ _ 16 mutant mutant ADJ JJ Degree=Pos _ _ _ _ 17 RXRs RXR NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 22 activator activator NOUN NN Number=Sing _ _ _ _ 23 functions function NOUN NNS Number=Plur _ _ _ _ 24 AF Af ADV RB _ _ _ _ SpaceAfter=No 25 - - SYM SYM _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 AF Af NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 or or CCONJ CC _ _ _ _ _ 33 AF Af PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 2 2 NUM CD NumType=Card _ _ _ _ 36 only only ADV RB _ _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 or or CCONJ CC _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 entire entire ADJ JJ Degree=Pos _ _ _ _ 41 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 binding binding VERB VBG VerbForm=Ger _ _ _ _ 44 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 47 introduced introduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 48 into into ADP IN _ _ _ _ _ 49 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 50 progenitor progenitor NOUN NN Number=Sing _ _ _ _ 51 cells cell NOUN NNS Number=Plur _ _ _ _ 52 via via ADP IN _ _ _ _ _ 53 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 54 retrovirus retrovirus NOUN NN Number=Sing _ _ _ _ 55 vectors vector NOUN NNS Number=Plur _ _ _ _ 56 and and CCONJ CC _ _ _ _ _ 57 analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 58 for for ADP IN _ _ _ _ _ 59 RXR- RXR- X AFX _ _ _ _ SpaceAfter=No 60 specific specific ADJ JJ Degree=Pos _ _ _ _ 61 effects effect NOUN NNS Number=Plur _ _ _ SpaceAfter=No 62 . . PUNCT . _ _ _ _ _ # sent_id = 12585 # text = It was found that expression of wild-type RXR and of the RXR mutants devoid of AF-1 and/or AF-2 supported a transient outgrowth of erythroid cells. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 wild wild ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 type type NOUN NN Number=Sing _ _ _ _ 10 RXR Rxr NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 RXR RXR PROPN NNP Number=Sing _ _ _ _ 15 mutants mutant NOUN NNS Number=Plur _ _ _ _ 16 devoid devoid VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 AF AF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ SpaceAfter=No 22 / / PUNCT , _ _ _ _ SpaceAfter=No 23 or or CCONJ CC _ _ _ _ _ 24 AF Af PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ _ 27 supported support VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 transient transient ADJ JJ Degree=Pos _ _ _ _ 30 outgrowth outgrowth NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 12586 # text = In marked contrast, expression of the dominant interfering deltaDNA-binding domain RXR, containing a deletion of the entire DNA-binding domain, was incompatible with erythroid cell growth in vitro, suggesting a pivotal role of RXR for erythroid cell development. 1 In in ADP IN _ _ _ _ _ 2 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 dominant dominant ADJ JJ Degree=Pos _ _ _ _ 9 interfering interfering NOUN NN Number=Sing _ _ _ _ 10 deltaDNA deltaDNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 domain domain NOUN NN Number=Sing _ _ _ _ 14 RXR Rxr NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 containing contain VERB VBG VerbForm=Ger _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 deletion deletion NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 entire entire ADJ JJ Degree=Pos _ _ _ _ 22 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 binding binding VERB VBG VerbForm=Ger _ _ _ _ 25 domain domain NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 28 incompatible incompatible ADJ JJ Degree=Pos _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 growth growth NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 suggesting suggest VERB VBG VerbForm=Ger _ _ _ _ 37 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 38 pivotal pivotal ADJ JJ Degree=Pos _ _ _ _ 39 role role NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 RXR RXR PROPN NNP Number=Sing _ _ _ _ 42 for for ADP IN _ _ _ _ _ 43 erythroid erythroid ADJ JJ Degree=Pos _ _ _ _ 44 cell cell NOUN NN Number=Sing _ _ _ _ 45 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12587 # text = Document 0030013037 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013037 0030013037 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12588 # text = Protease inhibitors block lipopolysaccharide induction of tissue factor gene expression in human monocytic cells by preventing activation of c-Rel/p65 heterodimers. 1 Protease Protease NOUN NN Number=Sing _ _ _ _ 2 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 3 block block VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 lipopolysaccharide lipopolysaccharide ADJ JJ Degree=Pos _ _ _ _ 5 induction induction NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 tissue tissue NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 by by SCONJ IN _ _ _ _ _ 16 preventing prevent VERB VBG VerbForm=Ger _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 / / PUNCT , _ _ _ _ SpaceAfter=No 23 p65 p65 NUM CD NumType=Card _ _ _ _ 24 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12589 # text = Tissue factor (TF) is expressed rapidly by human monocytes exposed to bacterial endotoxin (lipopolysaccharide, or LPS). 1 Tissue Tissue NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 TF TF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 rapidly rapidly ADV RB _ _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 12 exposed expose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 15 endotoxin endotoxin NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 LPS Lp NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 12590 # text = Transcriptional regulation is mediated by binding of c-Rel/p65 heterodimers to a kappa B-like site in the TF promoter. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by SCONJ IN _ _ _ _ _ 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 c- c- SYM NFP _ _ _ _ SpaceAfter=No 9 Rel Rel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 p65 p65 NUM CD NumType=Card _ _ _ _ 12 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 like like ADJ JJ Degree=Pos _ _ _ _ 19 site site NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 TF TF PROPN NNP Number=Sing _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 12591 # text = Nuclear translocation of cytosolic c-Rel/p65 heterodimers and other members of the NF-kappa B/Rel family requires dissociation and proteolytic degradation of the inhibitor protein, I kappa B alpha. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 translocation translocation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 cytosolic cytosolic NOUN NN Number=Sing _ _ _ _ 5 c- c- PUNCT : _ _ _ _ SpaceAfter=No 6 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 / / PUNCT , _ _ _ _ SpaceAfter=No 8 p65 p65 NUM CD NumType=Card _ _ _ _ 9 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 other other ADJ JJ Degree=Pos _ _ _ _ 12 members member NOUN NNS Number=Plur _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 / / PUNCT , _ _ _ _ SpaceAfter=No 20 Rel Rel PROPN NNP Number=Sing _ _ _ _ 21 family family NOUN NN Number=Sing _ _ _ _ 22 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 dissociation dissociation NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 proteolytic proteolytic ADJ JJ Degree=Pos _ _ _ _ 26 degradation degradation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 30 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 33 kappa kappa PROPN NNP Number=Sing _ _ _ _ 34 B b PROPN NNP Number=Sing _ _ _ _ 35 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 12592 # text = The protease inhibitors N alpha-tosylphenylalanyl chloromethyl ketone (TPCK) and N alpha-tosyl-L-lysine chloromethyl ketone (TLCK) block activation of NF-kappa B/Rel proteins by preventing degradation of I kappa B alpha. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 protease protease NOUN NN Number=Sing _ _ _ _ 3 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 4 N and CCONJ CC Abbr=Yes _ _ _ _ 5 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 tosylphenylalanyl tosylphenylalanyl NOUN NN Number=Sing _ _ _ _ 8 chloromethyl chloromethyl NOUN NN Number=Sing _ _ _ _ 9 ketone ketone NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 TPCK TPCK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 N N PROPN NNP Number=Sing _ _ _ _ 15 alpha- alpha- PUNCT : _ _ _ _ SpaceAfter=No 16 tosyl tosyl NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 L l NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 lysine lysine NOUN NN Number=Sing _ _ _ _ 21 chloromethyl chloromethyl NOUN NN Number=Sing _ _ _ _ 22 ketone ketone NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 TLCK TLCK NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 block block NOUN NN Number=Sing _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappa kappa PROPN NNP Number=Sing _ _ _ _ 32 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 / / PUNCT , _ _ _ _ SpaceAfter=No 34 Rel Rel PROPN NNP Number=Sing _ _ _ _ 35 proteins protein NOUN NNS Number=Plur _ _ _ _ 36 by by SCONJ IN _ _ _ _ _ 37 preventing prevent VERB VBG VerbForm=Ger _ _ _ _ 38 degradation degradation NOUN NN Number=Sing _ _ _ _ 39 of of ADP IN _ _ _ _ _ 40 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 41 kappa kappa PROPN NNP Number=Sing _ _ _ _ 42 B B PROPN NNP Number=Sing _ _ _ _ 43 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 12593 # text = To determine if TPCK and TLCK inhibited LPS induction of TF expression, freshly isolated human monocytes and monocytic THP-1 cells were pretreated with these inhibitors for 30 min before LPS stimulation. 1 To to PART TO _ _ _ _ _ 2 determine determine VERB VB VerbForm=Inf _ _ _ _ 3 if if SCONJ IN _ _ _ _ _ 4 TPCK TPCK PROPN NNP Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 TLCK TLCK PROPN NNP Number=Sing _ _ _ _ 7 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 LPS LPS PROPN NNP Number=Sing _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 TF TF NOUN NN Number=Sing _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 freshly freshly ADV RB _ _ _ _ _ 15 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 20 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 pretreated pretreate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 with with ADP IN _ _ _ _ _ 27 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 28 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 29 for for ADP IN _ _ _ _ _ 30 30 30 NUM CD NumType=Card _ _ _ _ 31 min min NOUN NNS Number=Plur _ _ _ _ 32 before before ADP IN _ _ _ _ _ 33 LPS Lps NOUN NN Number=Sing _ _ _ _ 34 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 12594 # text = Both TPCK and TLCK inhibited LPS induction of TF protein, TF mRNA and TF promoter activity in a dose-dependent manner. 1 Both both CCONJ CC _ _ _ _ _ 2 TPCK TPCK PROPN NNP Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 TLCK TLCK PROPN NNP Number=Sing _ _ _ _ 5 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 LPS LPS PROPN NNP Number=Sing _ _ _ _ 7 induction induction NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 TF TF NOUN NN Number=Sing _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 TF TF PROPN NNP Number=Sing _ _ _ _ 13 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 TF TF PROPN NNP Number=Sing _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 23 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 12595 # text = These inhibitors specifically prevented degradation of I kappa B alpha and nuclear translocation of c-Rel/p65 heterodimers. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 3 specifically specifically ADV RB _ _ _ _ _ 4 prevented prevent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 degradation degradation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B b PROPN NNP Number=Sing _ _ _ _ 10 alpha alpha PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 translocation translocation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 / / PUNCT , _ _ _ _ SpaceAfter=No 19 p65 p65 NUM CD NumType=Card _ _ _ _ 20 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 12596 # text = In contrast, TPCK and TLCK did not block induction of an immediate-early gene encoding the transcription factor, Egr-1. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 TPCK TPCK PROPN NNP Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 TLCK TLCK PROPN NNP Number=Sing _ _ _ _ 7 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 not not PART RB _ _ _ _ _ 9 block block VERB VB VerbForm=Inf _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 early early ADJ JJ Degree=Pos _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 Egr Egr PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 12597 # text = Taken together, these data indicated that inhibiting nuclear translocation of c-Rel/p65 heterodimers prevented LPS induction of TF gene transcription in monocytic cells. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 data data NOUN NN Number=Sing _ _ _ _ 6 indicated indicate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 9 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 10 translocation translocation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 Rel Rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 / / PUNCT , _ _ _ _ SpaceAfter=No 16 p65 p65 NUM CD NumType=Card _ _ _ _ 17 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ _ 18 prevented prevent VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 20 induction induction NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 TF TF PROPN NNP Number=Sing _ _ _ _ 23 gene gene PROPN NNP Number=Sing _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12598 # text = Document 0030013044 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013044 0030013044 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12599 # text = Increased interleukin 2 transcription in murine lymphocytes by ciprofloxacin. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 interleukin interleukin ADV RB _ _ _ _ _ 3 2 2 NUM CD NumType=Card _ _ _ _ 4 transcription transcription NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 murine murine ADJ JJ Degree=Pos _ _ _ _ 7 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 ciprofloxacin ciprofloxacin NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12600 # text = The fluoroquinolone antibiotic, ciprofloxacin (cipro), induces hyperproduction of interleukin 2 (IL-2) and interferon-gamma (IFN-gamma) in stimulated human peripheral blood lymphocytes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 fluoroquinolone fluoroquinolone NOUN NN Number=Sing _ _ _ _ 3 antibiotic antibiotic ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 ciprofloxacin ciprofloxacin NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 cipro cipro NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 hyperproduction hyperproduction NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 14 2 2 NUM CD NumType=Card _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 interferon interferon NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 gamma gamma NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 stimulated stimulate ADJ JJ Degree=Pos _ _ _ _ 31 human human ADJ JJ Degree=Pos _ _ _ _ 32 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 33 blood blood NOUN NN Number=Sing _ _ _ _ 34 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 12601 # text = In this investigation an enhanced and prolonged IL-2 and IL-2 mRNA response was also detected in both stimulated (T cell mitogens or alloantigens) murine splenocytes and in the stimulated murine T cell line EL-4 in the presence of ciprofloxacin (5-80 micrograms/ml) as compared to control cells without antibiotics. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 investigation investigation NOUN NN Number=Sing _ _ _ _ 4 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 prolonged prolonge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 2 2 NUM CD NumType=Card _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 16 response response NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 also also ADV RB _ _ _ _ _ 19 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 both both DET DT _ _ _ _ _ 22 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 T t NUM CD NumType=Card _ _ _ _ 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 mitogens mitogen NOUN NNS Number=Plur _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 alloantigens alloantigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 murine murine NOUN NN Number=Sing _ _ _ _ 31 splenocytes splenocyte NOUN NNS Number=Plur _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 murine murine NOUN NN Number=Sing _ _ _ _ 37 T t NUM CD NumType=Card _ _ _ _ 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 line line NOUN NN Number=Sing _ _ _ _ 40 EL El PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT , _ _ _ _ SpaceAfter=No 42 4 4 NUM CD NumType=Card _ _ _ _ 43 in in ADP IN _ _ _ _ _ 44 the the DET DT Definite=Def|PronType=Art _ _ _ _ 45 presence presence NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 ciprofloxacin ciprofloxacin NOUN NN Number=Sing _ _ _ _ 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 50 - - SYM SYM _ _ _ _ SpaceAfter=No 51 80 80 NUM CD NumType=Card _ _ _ _ 52 micrograms microgram NOUN NNS Number=Plur _ _ _ SpaceAfter=No 53 / / PUNCT , _ _ _ _ SpaceAfter=No 54 ml ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 ) ) PUNCT -RRB- _ _ _ _ _ 56 as as SCONJ IN _ _ _ _ _ 57 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 58 to to PART TO _ _ _ _ _ 59 control control VERB VB VerbForm=Inf _ _ _ _ 60 cells cell NOUN NNS Number=Plur _ _ _ _ 61 without without ADP IN _ _ _ _ _ 62 antibiotics antibiotic NOUN NNS Number=Plur _ _ _ SpaceAfter=No 63 . . PUNCT . _ _ _ _ _ # sent_id = 12602 # text = However, in contrast to human lymphocytes, IFN-gamma production was inhibited and IFN-gamma mRNA levels were unaffected at 24 h and only slightly upregulated at 48 and 72 h of culture in murine splenocytes incubated with cipro (20 micrograms/ml). 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 contrast contrast NOUN NN Number=Sing _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 gamma gamma NOUN NN Number=Sing _ _ _ _ 12 production production NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 IFN Ifn VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 gamma gamma NOUN NN Number=Sing _ _ _ _ 19 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 20 levels level NOUN NNS Number=Plur _ _ _ _ 21 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 unaffected unaffect ADJ JJ Degree=Pos _ _ _ _ 23 at at ADP IN _ _ _ _ _ 24 24 24 NUM CD NumType=Card _ _ _ _ 25 h h NOUN NN Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 only only ADV RB _ _ _ _ _ 28 slightly slightly ADV RB _ _ _ _ _ 29 upregulated upregulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 at at ADP IN _ _ _ _ _ 31 48 48 NUM CD NumType=Card _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 72 72 NUM CD NumType=Card _ _ _ _ 34 h h NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 culture culture NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 murine murine ADJ JJ Degree=Pos _ _ _ _ 39 splenocytes splenocyte NOUN NNS Number=Plur _ _ _ _ 40 incubated incubate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 with with ADP IN _ _ _ _ _ 42 cipro cipro NOUN NN Number=Sing _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 20 20 NUM CD NumType=Card _ _ _ _ 45 micrograms microgram NOUN NNS Number=Plur _ _ _ SpaceAfter=No 46 / / PUNCT , _ _ _ _ SpaceAfter=No 47 ml ml NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 12603 # text = EL-4 cells were transfected with a plasmid containing the IL-2 promoter and enhancer region linked to the chloramphenicol acetyltransferase (CAT) reporter gene. 1 EL EL INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 4 4 NUM CD NumType=Card _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 transfected transfect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 10 containing contain VERB VBG VerbForm=Ger _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 18 region region NOUN NN Number=Sing _ _ _ _ 19 linked link VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 23 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 CAT cat NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 reporter reporter NOUN NN Number=Sing _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 12604 # text = Analysis of CAT activity revealed that cipro enhanced IL-2 gene induction. 1 Analysis analysis NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 CAT Cat ADJ JJ Degree=Pos _ _ _ _ 4 activity activity NOUN NN Number=Sing _ _ _ _ 5 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 cipro cipro PROPN NNP Number=Sing _ _ _ _ 8 enhanced enhance VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 2 2 NUM CD NumType=Card _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 induction induction NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 12605 # text = In addition, EL-4 cells incubated with ciprofloxacin showed an early peak and more activated nuclear factor of activated T cells (NFAT-1) as compared to control cells without antibiotics. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 EL EL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 4 4 NUM CD NumType=Card _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 incubated incubate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 ciprofloxacin ciprofloxacin NOUN NN Number=Sing _ _ _ _ 11 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 early early ADJ JJ Degree=Pos _ _ _ _ 14 peak peak NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 more more ADV RBR _ _ _ _ _ 17 activated activated VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 X LS _ _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 as as SCONJ IN _ _ _ _ _ 30 compared compare VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 control control VERB VB VerbForm=Inf _ _ _ _ 33 cells cell NOUN NNS Number=Plur _ _ _ _ 34 without without ADP IN _ _ _ _ _ 35 antibiotics antibiotic NOUN NNS Number=Plur _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 12606 # text = Cipro did not affect the nuclear transcription factors AP-1 or NFIL-2A. 1 Cipro Cipro PROPN NNP Number=Sing _ _ _ _ 2 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 not not PART RB _ _ _ _ _ 4 affect affect VERB VB VerbForm=Inf _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 NFIL Nfil PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2A 2a PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 12607 # text = Taken together, cipro inhibited IFN-gamma synthesis, but enhanced IL-2 production in murine lymphocytes by means of influencing NFAT-1 and causing an increased IL-2 transcription. 1 Taken take PROPN NNP Number=Sing _ _ _ _ 2 together together ADV RB _ _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 cipro cipro VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 5 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 gamma gamma NOUN NN Number=Sing _ _ _ _ 9 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 production production NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 murine murine ADJ JJ Degree=Pos _ _ _ _ 19 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 means mean NOUN NNS Number=Plur _ _ _ _ 22 of of SCONJ IN _ _ _ _ _ 23 influencing influence VERB VBG VerbForm=Ger _ _ _ _ 24 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 causing cause VERB VBG VerbForm=Ger _ _ _ _ 29 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 2 2 NUM CD NumType=Card _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12608 # text = Document 0030013046 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013046 0030013046 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12609 # text = Interleukin-12 expression in B cells by transformation with Epstein-Barr virus. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 12 12 NUM CD NumType=Card _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 B b ADJ JJ Degree=Pos _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 transformation transformation NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 Barr Barr PROPN NNP Number=Sing _ _ _ _ 14 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12610 # text = Although interleukin (IL)-12 was originally purified from an Epstein-Barr (EBV)-transformed B cell line and the high correlation of EBV infection and IL-12 expression has been suggested, no study has reported whether EBV infection is directly linked to IL-12 expression. 1 Although although SCONJ IN _ _ _ _ _ 2 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 12 12 NUM CD NumType=Card _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 originally originally ADV RB _ _ _ _ _ 10 purified purify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 Epstein Epstein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 Barr Barr PROPN NNP Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 line line NOUN NN Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 high high ADJ JJ Degree=Pos _ _ _ _ 27 correlation correlation NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 EBV EBV PROPN NNP Number=Sing _ _ _ _ 30 infection infection NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 12 12 NUM CD NumType=Card _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ _ 36 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 38 suggested suggest VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 no no DET DT _ _ _ _ _ 41 study study NOUN NN Number=Sing _ _ _ _ 42 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 43 reported report VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 whether whether SCONJ IN _ _ _ _ _ 45 EBV EBV PROPN NNP Number=Sing _ _ _ _ 46 infection infection NOUN NN Number=Sing _ _ _ _ 47 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 48 directly directly ADV RB _ _ _ _ _ 49 linked link VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 50 to to ADP IN _ _ _ _ _ 51 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 52 - - PUNCT , _ _ _ _ SpaceAfter=No 53 12 12 NUM CD NumType=Card _ _ _ _ 54 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 12611 # text = To address this issue, we have investigated IL-12 expression in B cells during in vitro transformation with EBV. 1 To to PART TO _ _ _ _ _ 2 address address VERB VB VerbForm=Inf _ _ _ _ 3 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 4 issue issue NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 12 12 NUM CD NumType=Card _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 B b ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 during during ADP IN _ _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 vitro vitro NOUN NN Number=Sing _ _ _ _ 19 transformation transformation NOUN NN Number=Sing _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 12612 # text = Human peripheral B cells became capable of constitutively producing p40 by in vitro transformation with EBV, coincident with the expression of latent membrane protein 1 (LMP1) of EBV. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 3 B b ADJ JJ Degree=Pos _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 became become VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 capable capable ADJ JJ Degree=Pos _ _ _ _ 7 of of SCONJ IN _ _ _ _ _ 8 constitutively constitutively ADV RB _ _ _ _ _ 9 producing produce VERB VBG VerbForm=Ger _ _ _ _ 10 p40 p40 NUM CD NumType=Card _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 vitro vitro NUM CD NumType=Card _ _ _ _ 14 transformation transformation NOUN NN Number=Sing _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 coincident coincident NOUN NN Number=Sing _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 latent latent ADJ JJ Degree=Pos _ _ _ _ 24 membrane membrane NOUN NN Number=Sing _ _ _ _ 25 protein protein NOUN NN Number=Sing _ _ _ _ 26 1 1 NUM CD NumType=Card _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 LMP1 Lmp1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 EBV EBV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 12613 # text = These B cells expressed p40 and p35 mRNA, and phorbol myristate acetate (PMA) stimulation strongly enhanced p40 and p70 production. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 B b ADJ JJ Degree=Pos _ _ _ _ 3 cells cell NOUN NNS Number=Plur _ _ _ _ 4 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 p40 p40 NUM CD NumType=Card _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 p35 p35 NUM CD NumType=Card _ _ _ _ 8 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 phorbol phorbol ADJ JJ Degree=Pos _ _ _ _ 12 myristate myristate NOUN NN Number=Sing _ _ _ _ 13 acetate acetate NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ _ 17 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 18 strongly strongly ADV RB _ _ _ _ _ 19 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 p40 p40 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 p70 p70 NUM CD NumType=Card _ _ _ _ 23 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 12614 # text = Furthermore, transfection with LMP1 expression vector into a human B lymphoma cell line, Daudi, led to p40 production with nuclear factor (NF)-kappaB activation. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 transfection transfection NOUN NN Number=Sing _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 LMP1 LMP1 NUM CD NumType=Card _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 vector vector NOUN NN Number=Sing _ _ _ _ 8 into into ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 B b NOUN NN Number=Sing _ _ _ _ 12 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 Daudi Daudi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 led lead VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 p40 p40 NUM CD NumType=Card _ _ _ _ 21 production production NOUN NN Number=Sing _ _ _ _ 22 with with ADP IN _ _ _ _ _ 23 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 24 factor factor NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappaB kappab NOUN NN Number=Sing _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 12615 # text = These results suggest that transformation of primary B cells with EBV induces IL-12 expression potentially through LMP1 expression. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 transformation transformation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 primary primary ADJ JJ Degree=Pos _ _ _ _ 8 B b ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 EBV EBV PROPN NNP Number=Sing _ _ _ _ 12 induces induce NOUN NNS Number=Plur _ _ _ _ 13 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 12 12 NUM CD NumType=Card _ _ _ _ 16 expression expression NOUN NN Number=Sing _ _ _ _ 17 potentially potentially ADV RB _ _ _ _ _ 18 through through ADP IN _ _ _ _ _ 19 LMP1 LMP1 NUM CD NumType=Card _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 12616 # text = Copyright 1998 Academic Press. 1 Copyright copyright NOUN NN Number=Sing _ _ _ _ 2 1998 1998 NUM CD NumType=Card _ _ _ _ 3 Academic academic PROPN NNP Number=Sing _ _ _ _ 4 Press. Press. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12617 # text = Document 0030013051 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013051 0030013051 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12618 # text = Downstream activation of a TATA-less promoter by Oct-2, Bob1, and NF-kappaB directs expression of the homing receptor BLR1 to mature B cells. 1 Downstream downstream ADJ JJ Degree=Pos _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 TATA TATa NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 less less ADJ JJ Degree=Pos _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 -2 -2 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 Bob1 bob1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 19 directs direct VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 homing home VERB VBG VerbForm=Ger _ _ _ _ 24 receptor receptor NOUN NN Number=Sing _ _ _ _ 25 BLR1 BLR1 NOUN NN Number=Sing _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 mature mature ADJ JJ Degree=Pos _ _ _ _ 28 B b ADJ JJ Degree=Pos _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12619 # text = The chemokine receptor, BLR1, is a major regulator of the microenvironmental homing of B cells in lymphoid organs. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 chemokine chemokine NOUN NN Number=Sing _ _ _ _ 3 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 BLR1 BLR1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 major major ADJ JJ Degree=Pos _ _ _ _ 10 regulator regulator NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 microenvironmental microenvironmental ADJ JJ Degree=Pos _ _ _ _ 14 homing homing NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 B b ADJ JJ Degree=Pos _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 lymphoid lymphoid ADJ JJ Degree=Pos _ _ _ _ 20 organs organ NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 12620 # text = In vitro studies identify three essential elements of the TATA-less blr1 core promoter that confer cell type- and differentiation-specific expression in the B cells of both humans and mice, a functional promoter region (-36 with respect to the transcription start site), a NF-kappaB motif (+44), and a noncanonical octamer motif (+157). 1 In in ADP IN _ _ _ _ _ 2 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 identify identify VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 three three NUM CD NumType=Card _ _ _ _ 6 essential essential ADJ JJ Degree=Pos _ _ _ _ 7 elements element NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 TATA TATa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 less less ADV RBR Degree=Cmp _ _ _ _ 13 blr1 blr1 NUM CD NumType=Card _ _ _ _ 14 core core NOUN NN Number=Sing _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 confer confer VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 type type NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 specific specific ADJ JJ Degree=Pos _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 B b ADJ JJ Degree=Pos _ _ _ _ 29 cells cell NOUN NNS Number=Plur _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 both both DET DT _ _ _ _ _ 32 humans humans NOUN NNS Number=Plur _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 mice mouse NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 functional functional ADJ JJ Degree=Pos _ _ _ _ 38 promoter promoter NOUN NN Number=Sing _ _ _ _ 39 region region NOUN NN Number=Sing _ _ _ _ 40 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 41 - - SYM SYM _ _ _ _ SpaceAfter=No 42 36 36 NUM CD NumType=Card _ _ _ _ 43 with with ADP IN _ _ _ _ _ 44 respect respect NOUN NN Number=Sing _ _ _ _ 45 to to ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 transcription transcription NOUN NN Number=Sing _ _ _ _ 48 start start NOUN NN Number=Sing _ _ _ _ 49 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 51 , , PUNCT , _ _ _ _ _ 52 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 53 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 56 motif motif NOUN NN Number=Sing _ _ _ _ 57 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 58 +44 +44 NUM CD NumType=Card _ _ _ SpaceAfter=No 59 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 60 , , PUNCT , _ _ _ _ _ 61 and and CCONJ CC _ _ _ _ _ 62 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 63 noncanonical noncanonical ADJ JJ Degree=Pos _ _ _ _ 64 octamer octamer NOUN NN Number=Sing _ _ _ _ 65 motif motif NOUN NN Number=Sing _ _ _ _ 66 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 67 +157 +157 NUM CD NumType=Card _ _ _ SpaceAfter=No 68 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 69 . . PUNCT . _ _ _ _ _ # sent_id = 12621 # text = The importance of these sites was confirmed by in vivo studies in gene-targeted mice deficient of either Oct-2, Bob1, or both NF-kappaB subunits p50 and p52. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 importance importance NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 sites site NOUN NNS Number=Plur _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 confirmed confirm VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 vivo vivo NOUN NN Number=Sing _ _ _ _ 11 studies study NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 targeted target VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 mice mouse NOUN NNS Number=Plur _ _ _ _ 17 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 either either CCONJ CC _ _ _ _ _ 20 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 -2 -2 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 Bob1 bob1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 or or CCONJ CC _ _ _ _ _ 26 both both DET DT _ _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 30 subunits subunit NOUN NNS Number=Plur _ _ _ _ 31 p50 p50 NUM CD NumType=Card _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 p52 p52 NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 12622 # text = In all of these animals, the expression of BLR1 was reduced or absent. 1 In in ADP IN _ _ _ _ _ 2 all all DET DT _ _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 5 animals animal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 expression expression NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 BLR1 BLR1 PROPN NNP Number=Sing _ _ _ _ 11 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 12 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 absent absent VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 12623 # text = In mice deficient only of p52/NF-kappaB, BLR1 expression was unaffected. 1 In in ADP IN _ _ _ _ _ 2 mice mice NOUN NN Number=Sing _ _ _ _ 3 deficient deficient NOUN NN Number=Sing _ _ _ _ 4 only only ADV RB _ _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 p52/ p52ith ADP IN Abbr=Yes _ _ _ SpaceAfter=No 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 BLR1 BLR1 NUM CD NumType=Card _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 14 unaffected unaffected ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 12624 # text = Thus our data demonstrate that BLR1 is a target gene for Oct-2, Bob1, and members of the NF-kappaB/Rel family and provides a link to the impaired B cell functions in mice deficient for these factors. 1 Thus thus ADP IN _ _ _ _ _ 2 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 3 data data NOUN NN Number=Sing _ _ _ _ 4 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 BLR1 BLR1 PROPN NNP Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 target target NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 -2 -2 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 Bob1 bob1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 members member NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 25 Rel Rel PROPN NNP Number=Sing _ _ _ _ 26 family family NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 provides provide VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 30 link link NOUN NN Number=Sing _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 impaired impaire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 B b NOUN NN Number=Sing _ _ _ _ 35 cell cell NOUN NN Number=Sing _ _ _ _ 36 functions function NOUN NNS Number=Plur _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 mice mouse NOUN NNS Number=Plur _ _ _ _ 39 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 40 for for ADP IN _ _ _ _ _ 41 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 42 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12625 # text = Document 0030013059 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013059 0030013059 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12626 # text = Defective transcription of the IL-2 gene is associated with impaired expression of c-Fos, FosB, and JunB in anergic T helper 1 cells. 1 Defective defective ADJ JJ Degree=Pos _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 impaired impaire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 Fos Fo NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 FosB FosB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 JunB JunB PROPN NNP Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 anergic anergic PROPN NNP Number=Sing _ _ _ _ 25 T T PROPN NNP Number=Sing _ _ _ _ 26 helper helper NOUN NN Number=Sing _ _ _ _ 27 1 1 NUM CD NumType=Card _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12627 # text = Anergic CD4+ 1 Anergic Anergic PROPN NNP Number=Sing _ _ _ _ 2 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 + + SYM NFP _ _ _ _ _ # sent_id = 12628 # text = Th cells do not produce IL-2 when challenged with Ag-pulsed accessory cells because of a transcriptional defect. 1 Th th ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 not not PART RB _ _ _ _ _ 5 produce produce VERB VB VerbForm=Inf _ _ _ _ 6 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 when when ADV WRB PronType=Int _ _ _ _ 10 challenged challenge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 Ag- Ag- PUNCT : _ _ _ _ SpaceAfter=No 13 pulsed pulse VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 accessory accessory ADJ JJ Degree=Pos _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 because because ADP IN _ _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 20 defect defect NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 12629 # text = In this work, we report that these anergic T cells are defective in their ability to up-regulate protein binding and transactivation at two critical IL-2 DNA enhancer elements: NF-AT (nuclear factor of activated T cells; a sequence that binds a heterotrimeric NFATp, Fos, and Jun protein complex) and Activator Protein-1 (AP-1) (that binds Fos and Jun heterodimers). 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 work work NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 9 anergic anergic ADJ JJ Degree=Pos _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 defective defective ADJ JJ Degree=Pos _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 ability ability NOUN NN Number=Sing _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 up up ADV RB _ _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 regulate regulate ADJ JJ Degree=Pos _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ _ 22 binding binding VERB VBG VerbForm=Ger _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 25 at at ADP IN _ _ _ _ _ 26 two two NUM CD NumType=Card _ _ _ _ 27 critical critical ADJ JJ Degree=Pos _ _ _ _ 28 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 2 2 NUM CD NumType=Card _ _ _ _ 31 DNA dna NOUN NN Number=Sing _ _ _ _ 32 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 33 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 : : PUNCT : _ _ _ _ _ 35 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 AT AT PROPN NNP Number=Sing _ _ _ _ 38 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 39 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 40 factor factor NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 43 T t PROPN NNP Number=Sing _ _ _ _ 44 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 45 ; ; PUNCT , _ _ _ _ _ 46 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 47 sequence sequence NOUN NN Number=Sing _ _ _ _ 48 that that PRON WDT PronType=Rel _ _ _ _ 49 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 50 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 51 heterotrimeric heterotrimeric ADJ JJ Degree=Pos _ _ _ _ 52 NFATp NFATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 53 , , PUNCT , _ _ _ _ _ 54 Fos Fos PROPN NNP Number=Sing _ _ _ SpaceAfter=No 55 , , PUNCT , _ _ _ _ _ 56 and and CCONJ CC _ _ _ _ _ 57 Jun Jun PROPN NNP Number=Sing _ _ _ _ 58 protein protein NOUN NN Number=Sing _ _ _ _ 59 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 ) ) PUNCT -RRB- _ _ _ _ _ 61 and and CCONJ CC _ _ _ _ _ 62 Activator Activator PROPN NNP Number=Sing _ _ _ _ 63 Protein protein PROPN NNP Number=Sing _ _ _ SpaceAfter=No 64 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 65 1 1 NUM CD NumType=Card _ _ _ _ 66 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 67 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 68 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 69 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 70 ) ) PUNCT -RRB- _ _ _ _ _ 71 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 72 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 73 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 74 Fos Fos PROPN NNP Number=Sing _ _ _ _ 75 and and CCONJ CC _ _ _ _ _ 76 Jun Jun PROPN NNP Number=Sing _ _ _ _ 77 heterodimers heterodimer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 78 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 79 . . PUNCT . _ _ _ _ _ # sent_id = 12630 # text = Western blot analysis of nuclear extracts showed that the impaired DNA-protein interactions in anergic T cells were associated with poor expression of the inducible AP-1 family members c-Fos, FosB, and JunB. 1 Western western ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 6 extracts extract NOUN NNS Number=Plur _ _ _ _ 7 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 that that SCONJ IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 impaired impaire VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 interactions interaction NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 anergic anergic ADJ JJ Degree=Pos _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 poor poor ADJ JJ Degree=Pos _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 27 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT , _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 family family NOUN NN Number=Sing _ _ _ _ 31 members member NOUN NNS Number=Plur _ _ _ _ 32 c- c- PUNCT , _ _ _ _ SpaceAfter=No 33 Fos Fos PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 FosB FosB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 JunB JunB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 12631 # text = However, the reduced expression of these proteins was not the result of a global TCR/CD3-signaling defect because CD3 cross-linking induced an equivalent increase in intracellular-free calcium ions, as well as NFATp dephosphorylation, translocation to the nucleus, and DNA binding in both normal and anergic T cells. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 proteins protein NOUN NNS Number=Plur _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 not not PART RB _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 result result NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 global global ADJ JJ Degree=Pos _ _ _ _ 16 TCR/CD3 TCR/CD3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 -signaling -signal NOUN NN Number=Sing _ _ _ _ 18 defect defect NOUN NN Number=Sing _ _ _ _ 19 because because SCONJ IN _ _ _ _ _ 20 CD3 CD3 NUM CD NumType=Card _ _ _ _ 21 cross cross NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 -linking -link NOUN NN Number=Sing _ _ _ _ 23 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 equivalent equivalent ADJ JJ Degree=Pos _ _ _ _ 26 increase increase NOUN NN Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 intracellular intracellular ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 free free ADJ JJ Degree=Pos _ _ _ _ 31 calcium calcium NOUN NN Number=Sing _ _ _ _ 32 ions ion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 as as ADV RB _ _ _ _ _ 35 well well ADV RB Degree=Pos _ _ _ _ 36 as as ADP IN _ _ _ _ _ 37 NFATp NFATp PROPN NNP Number=Sing _ _ _ _ 38 dephosphorylation dephosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 translocation translocation NOUN NN Number=Sing _ _ _ _ 41 to to ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 , , PUNCT , _ _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 DNA dna NOUN NN Number=Sing _ _ _ _ 47 binding binding VERB VBG VerbForm=Ger _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 both both CCONJ CC _ _ _ _ _ 50 normal normal ADJ JJ Degree=Pos _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 anergic anergic ADJ JJ Degree=Pos _ _ _ _ 53 T t PROPN NNP Number=Sing _ _ _ _ 54 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 55 . . PUNCT . _ _ _ _ _ # sent_id = 12632 # text = Thus, defective IL-2 gene transcription appears to be due, at least in part, to a selective block in the expression of the AP-1 Fos and Jun family members in anergic T cells. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 defective defective ADJ JJ Degree=Pos _ _ _ _ 4 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 2 2 NUM CD NumType=Card _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 transcription transcription NOUN NN Number=Sing _ _ _ _ 9 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 be be AUX VB VerbForm=Inf _ _ _ _ 12 due due ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 at at ADV RB _ _ _ _ _ 15 least least ADV RBS Degree=Sup _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 part part ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 selective selective ADJ JJ Degree=Pos _ _ _ _ 22 block block NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 Fos Fo NOUN NNS Number=Plur _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 Jun Jun PROPN NNP Number=Sing _ _ _ _ 34 family family NOUN NN Number=Sing _ _ _ _ 35 members member NOUN NNS Number=Plur _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 anergic anergic ADJ JJ Degree=Pos _ _ _ _ 38 T t PROPN NNP Number=Sing _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12633 # text = Document 0030013060 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013060 0030013060 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12634 # text = Structure and expression of the human GATA3 gene. 1 Structure structure NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 GATA3 GATA3 NOUN NN Number=Sing _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12635 # text = GATA3, a member of the GATA family that is abundantly expressed in the T-lymphocyte lineage, is thought to participate in T-cell receptor gene activation through binding to enhancers. 1 GATA3 GATA3 NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 member member NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 GATA GATA PROPN NNP Number=Sing _ _ _ _ 8 family family NOUN NN Number=Sing _ _ _ _ 9 that that PRON WDT PronType=Rel _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 abundantly abundantly ADV RB _ _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 17 lineage lineage NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 participate participate VERB VB VerbForm=Inf _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 receptor receptor NOUN NN Number=Sing _ _ _ _ 27 gene gene NOUN NN Number=Sing _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 through through SCONJ IN _ _ _ _ _ 30 binding bind VERB VBG VerbForm=Ger _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 enhancers enhancer NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 12636 # text = To understand GATA3 gene regulation, we cloned the human gene and the 5' end of the mouse GATA3 gene. 1 To to PART TO _ _ _ _ _ 2 understand understand VERB VB VerbForm=Inf _ _ _ _ 3 GATA3 GATA3 NUM CD NumType=Card _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 8 cloned clon VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 ' ' PUNCT `` _ _ _ _ _ 16 end end NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 mouse mouse NOUN NN Number=Sing _ _ _ _ 20 GATA3 GATA3 NUM CD NumType=Card _ _ _ _ 21 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 12637 # text = We show that the human GATA3 gene contains six exons distributed over 17 kb of DNA. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 GATA3 GATA3 NOUN NN Number=Sing _ _ _ _ 7 gene gene NOUN NN Number=Sing _ _ _ _ 8 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 six six NUM CD NumType=Card _ _ _ _ 10 exons exon NOUN NNS Number=Plur _ _ _ _ 11 distributed distribute VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 over over ADP IN _ _ _ _ _ 13 17 17 NUM CD NumType=Card _ _ _ _ 14 kb kb NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 12638 # text = The two human GATA3 zinc fingers are encoded by two separate exons highly conserved with those of GATA1, but no other structural homologies between these two genes can be found. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 human human ADJ JJ Degree=Pos _ _ _ _ 4 GATA3 GATA3 NOUN NN Number=Sing _ _ _ _ 5 zinc zinc NOUN NN Number=Sing _ _ _ _ 6 fingers finger NOUN NNS Number=Plur _ _ _ _ 7 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 encoded encod VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 two two NUM CD NumType=Card _ _ _ _ 11 separate separate ADJ JJ Degree=Pos _ _ _ _ 12 exons exon NOUN NNS Number=Plur _ _ _ _ 13 highly highly ADV RB _ _ _ _ _ 14 conserved conserved ADJ JJ Degree=Pos _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 GATA1 GATA1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 no no DET DT _ _ _ _ _ 22 other other ADJ JJ Degree=Pos _ _ _ _ 23 structural structural ADJ JJ Degree=Pos _ _ _ _ 24 homologies homology NOUN NNS Number=Plur _ _ _ _ 25 between between ADP IN _ _ _ _ _ 26 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 27 two two NUM CD NumType=Card _ _ _ _ 28 genes gene NOUN NNS Number=Plur _ _ _ _ 29 can can AUX MD VerbForm=Fin _ _ _ _ 30 be be AUX VB VerbForm=Inf _ _ _ _ 31 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 12639 # text = The human and mouse GATA3 transcription units start at a major initiation site. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 mouse mouse NOUN NN Number=Sing _ _ _ _ 5 GATA3 GATA3 NOUN NN Number=Sing _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 units unit NOUN NNS Number=Plur _ _ _ _ 8 start start VERB VB VerbForm=Inf _ _ _ _ 9 at at ADP IN _ _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 major major ADJ JJ Degree=Pos _ _ _ _ 12 initiation initiation NOUN NN Number=Sing _ _ _ _ 13 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 12640 # text = The promoter sequence analysis of these two genes revealed that they are embedded within a CpG island and share structural features often found in the promoters of housekeeping genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 promoter promoter NOUN NN Number=Sing _ _ _ _ 3 sequence sequence NOUN NN Number=Sing _ _ _ _ 4 analysis analysis NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 two two NUM CD NumType=Card _ _ _ _ 8 genes gene NOUN NNS Number=Plur _ _ _ _ 9 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 10 that that SCONJ IN _ _ _ _ _ 11 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 embedded embedd VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 within within ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 CpG CpG PROPN NNP Number=Sing _ _ _ _ 17 island island NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 share share VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 structural structural ADJ JJ Degree=Pos _ _ _ _ 21 features feature NOUN NNS Number=Plur _ _ _ _ 22 often often ADV RB _ _ _ _ _ 23 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 promoters promoter NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 housekeeping housekeeping NOUN NN Number=Sing _ _ _ _ 29 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 12641 # text = Finally, we show that a DNA fragment containing the human GATA3 transcription unit, 3 kb upstream from the initiation site and 4 kb downstream from the polyadenylation site, displays T-cell specificity. 1 Finally finally ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 DNA dna NOUN NN Number=Sing _ _ _ _ 8 fragment fragment NOUN NN Number=Sing _ _ _ _ 9 containing contain VERB VBG VerbForm=Ger _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 GATA3 GATA3 NOUN NN Number=Sing _ _ _ _ 13 transcription transcription NOUN NN Number=Sing _ _ _ _ 14 unit unit NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 3 3 NUM CD NumType=Card _ _ _ _ 17 kb kb NOUN NN Number=Sing _ _ _ _ 18 upstream upstream NOUN NN Number=Sing _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 initiation initiation NOUN NN Number=Sing _ _ _ _ 22 site site NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 4 4 NUM CD NumType=Card _ _ _ _ 25 kb kb NOUN NN Number=Sing _ _ _ _ 26 downstream downstream NOUN NN Number=Sing _ _ _ _ 27 from from ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 polyadenylation polyadenylation NOUN NN Number=Sing _ _ _ _ 30 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 displays display NOUN NNS Number=Plur _ _ _ _ 33 T- T- PUNCT : _ _ _ _ SpaceAfter=No 34 cell cell NOUN NN Number=Sing _ _ _ _ 35 specificity specificity NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12642 # text = Document 0030013065 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013065 0030013065 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12643 # text = Agonistic activity of a CD40-specific single-chain Fv constructed from the variable regions of mAb G28-5. 1 Agonistic Agonistic ADJ JJ Degree=Pos _ _ _ _ 2 activity activity NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 single single ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 chain chain NOUN NN Number=Sing _ _ _ _ 11 Fv Fv AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 constructed construct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 from from ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 variable variable ADJ JJ Degree=Pos _ _ _ _ 16 regions region NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 mAb mAb PROPN NNP Number=Sing _ _ _ _ 19 G28 G28 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12644 # text = A single-chain Fv (sFv) was expressed from the variable regions of the CD40-specific mAb G28-5. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 single single ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 chain chain NOUN NN Number=Sing _ _ _ _ 5 Fv Fv PROPN NNP Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 sFv sFv PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 10 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 variable variable ADJ JJ Degree=Pos _ _ _ _ 14 regions region NOUN NNS Number=Plur _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 mAb mAb NOUN NN Number=Sing _ _ _ _ 21 G28 G28 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 -5 -5 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 12645 # text = The molecule bound CD40 with a high affinity (2.2 nM) and was a monomer in solution. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 molecule molecule NOUN NN Number=Sing _ _ _ _ 3 bound bound ADP IN _ _ _ _ _ 4 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 high high ADJ JJ Degree=Pos _ _ _ _ 8 affinity affinity NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 2.2 2.2 NUM CD NumType=Card _ _ _ _ 11 nM nm NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 monomer monomer NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 solution solution NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 12646 # text = Surprisingly, G28-5 sFv was a potent CD40 agonist that rapidly crosslinked CD40 on the cell surface but did not crosslink CD40-Ig in solution. 1 Surprisingly surprisingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 G28 G28 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 - - SYM SYM _ _ _ _ SpaceAfter=No 5 5 5 NUM CD NumType=Card _ _ _ _ 6 sFv sFv PROPN NNP Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 potent potent NOUN NN Number=Sing _ _ _ _ 10 CD40 CD40 NOUN NN Number=Sing _ _ _ _ 11 agonist agonist NOUN NN Number=Sing _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 rapidly rapidly ADV RB _ _ _ _ _ 14 crosslinked crosslink VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 CD40 CD40 NUM CD NumType=Card _ _ _ _ 16 on on ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 surface surface NOUN NN Number=Sing _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 crosslink crosslink VERB VB VerbForm=Inf _ _ _ _ 24 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 Ig ig PROPN NNP Number=Sing _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 solution solution NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 12647 # text = G28-5 sFv was a more potent agonist than G28-5 IgG and was able to stimulate CD40 responses by B cells and monocytes. 1 G28 G28 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 -5 -5 NUM CD NumType=Card _ _ _ _ 3 sFv sFv NOUN NN Number=Sing _ _ _ _ 4 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 more more ADV RBR _ _ _ _ _ 7 potent potent ADJ JJ Degree=Pos _ _ _ _ 8 agonist agonist NOUN NN Number=Sing _ _ _ _ 9 than than ADP IN _ _ _ _ _ 10 G28 G28 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 -5 -5 NUM CD NumType=Card _ _ _ _ 12 IgG Igg NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 able able ADJ JJ Degree=Pos _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 stimulate stimulate VERB VB VerbForm=Inf _ _ _ _ 18 CD40 CD40 NUM CD NumType=Card _ _ _ _ 19 responses response NOUN NNS Number=Plur _ _ _ _ 20 by by ADP IN _ _ _ _ _ 21 B b ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 monocytes. monocytes. NOUN NN Number=Sing _ _ _ _ # sent_id = 12648 # text = G28-5 1 G28 G28 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 -5 -5 NUM CD NumType=Card _ _ _ _ # sent_id = 12649 # text = IgG partially blocked, whereas G28-5 sFv augmented CD40 responses during stimulation with natural ligand (gp39-CD8 fusion protein). 1 IgG IgG ADV RB _ _ _ _ _ 2 partially partially ADV RB _ _ _ _ _ 3 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 whereas whereas SCONJ IN _ _ _ _ _ 6 G28 G28 NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 5 5 NUM CD NumType=Card _ _ _ _ 9 sFv sFv NOUN NN Number=Sing _ _ _ _ 10 augmented augment VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 CD40 CD40 NUM CD NumType=Card _ _ _ _ 12 responses response NOUN NNS Number=Plur _ _ _ _ 13 during during ADP IN _ _ _ _ _ 14 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 natural natural ADJ JJ Degree=Pos _ _ _ _ 17 ligand ligand NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 gp39 gp39 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 CD8 Cd8 NOUN NN Number=Sing _ _ _ _ 22 fusion fusion NOUN NN Number=Sing _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 12650 # text = These results indicate that the functional activity of ligands built from the binding site of G28-5 is highly dependent upon the size and physical properties of the molecule both in solution and on the cell surfaces. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 functional functional ADJ JJ Degree=Pos _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 ligands ligand NOUN NNS Number=Plur _ _ _ _ 10 built build VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 binding binding VERB VBG VerbForm=Ger _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 G28 G28 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 - - SYM SYM _ _ _ _ SpaceAfter=No 18 5 5 NUM CD NumType=Card _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 highly highly ADV RB _ _ _ _ _ 21 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 22 upon upon ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 size size NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 physical physical ADJ JJ Degree=Pos _ _ _ _ 27 properties property NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 molecule molecule NOUN NN Number=Sing _ _ _ _ 31 both both CCONJ CC _ _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 solution solution NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 on on ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 cell cell NOUN NN Number=Sing _ _ _ _ 38 surfaces surfaces NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12651 # text = Document 0030013069 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013069 0030013069 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12652 # text = Stimulation of a human T-cell clone with anti-CD3 or tumor necrosis factor induces NF-kappa B translocation but not human immunodeficiency virus 1 enhancer-dependent transcription. 1 Stimulation Stimulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 clone clone NOUN NN Number=Sing _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 10 or or CCONJ CC _ _ _ _ _ 11 tumor tumor NOUN NN Number=Sing _ _ _ _ 12 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 induces induce NOUN NNS Number=Plur _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 translocation translocation NOUN NN Number=Sing _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 not not PART RB _ _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 24 virus virus NOUN NN Number=Sing _ _ _ _ 25 1 1 NUM CD NumType=Card _ _ _ _ 26 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 -dependent -dependent ADJ JJ Degree=Pos _ _ _ _ 28 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12653 # text = The expression of transiently transfected expression vectors under the control of the long terminal repeat (LTR) of the human immunodeficiency virus (HIV) or its enhancer sequence and the translocation of the HIV enhancer-binding protein NF-kappa B were analyzed in two human T-cell clones stimulated through their T-cell receptor complex or by tumor necrosis factor or phorbol 12-myristate 13-acetate. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 transiently transiently ADV RB _ _ _ _ _ 5 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 vectors vector NOUN NNS Number=Plur _ _ _ _ 8 under under ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 control control NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 long long ADJ JJ Degree=Pos _ _ _ _ 14 terminal terminal NOUN NN Number=Sing _ _ _ _ 15 repeat repeat NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 23 virus virus NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 or or CCONJ CC _ _ _ _ _ 28 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 29 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 30 sequence sequence NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 translocation translocation NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 HIV HIV PROPN NNP Number=Sing _ _ _ _ 37 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 binding binding VERB VBG VerbForm=Ger _ _ _ _ 40 protein protein NOUN NN Number=Sing _ _ _ _ 41 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 kappa kappa NOUN NN Number=Sing _ _ _ _ 44 B b NOUN NN Number=Sing _ _ _ _ 45 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 46 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 two two NUM CD NumType=Card _ _ _ _ 49 human human ADJ JJ Degree=Pos _ _ _ _ 50 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 cell cell NOUN NN Number=Sing _ _ _ _ 52 clones clone NOUN NNS Number=Plur _ _ _ _ 53 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 54 through through ADP IN _ _ _ _ _ 55 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 56 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 cell cell NOUN NN Number=Sing _ _ _ _ 58 receptor receptor NOUN NN Number=Sing _ _ _ _ 59 complex complex NOUN NN Number=Sing _ _ _ _ 60 or or CCONJ CC _ _ _ _ _ 61 by by ADP IN _ _ _ _ _ 62 tumor tumor NOUN NN Number=Sing _ _ _ _ 63 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 64 factor factor NOUN NN Number=Sing _ _ _ _ 65 or or CCONJ CC _ _ _ _ _ 66 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 67 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 68 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 69 myristate myristate NOUN NN Number=Sing _ _ _ _ 70 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 71 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 72 acetate acetate NOUN NN Number=Sing _ _ _ SpaceAfter=No 73 . . PUNCT . _ _ _ _ _ # sent_id = 12654 # text = We found a dissociation of NF-kappa B translocation from transactivation of either the HIV LTR or the HIV enhancer. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 dissociation dissociation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 translocation translocation NOUN NN Number=Sing _ _ _ _ 11 from from ADP IN _ _ _ _ _ 12 transactivation transactivation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 either either CCONJ CC _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 HIV HIV PROPN NNP Number=Sing _ _ _ _ 17 LTR LTR PROPN NNP Number=Sing _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 HIV HIV PROPN NNP Number=Sing _ _ _ _ 21 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 12655 # text = Interleukin 2 induced proliferation but not NF-kappa B translocation or LTR transactivation. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ _ 2 2 2 NUM CD NumType=Card _ _ _ _ 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 5 but but CCONJ CC _ _ _ _ _ 6 not not ADV RB _ _ _ _ _ 7 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ _ 11 translocation translocation NOUN NN Number=Sing _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 LTR Ltr NOUN NN Number=Sing _ _ _ _ 14 transactivation transactivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 12656 # text = Phorbol ester or specific antigen recognition induced HIV LTR transactivation, whereas stimulation with tumor necrosis factor or antibody to CD3 did not. 1 Phorbol Phorbol NOUN NN Number=Sing _ _ _ _ 2 ester ester NOUN NN Number=Sing _ _ _ _ 3 or or CCONJ CC _ _ _ _ _ 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 6 recognition recognition NOUN NN Number=Sing _ _ _ _ 7 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 HIV HIV PROPN NNP Number=Sing _ _ _ _ 9 LTR LTR PROPN NNP Number=Sing _ _ _ _ 10 transactivation transactivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 whereas whereas SCONJ IN _ _ _ _ _ 13 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 tumor tumor NOUN NN Number=Sing _ _ _ _ 16 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 or or CCONJ CC _ _ _ _ _ 19 antibody antibody PRON NN Number=Sing _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 CD3 CD3 NUM CD NumType=Card _ _ _ _ 22 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 not not PART RB _ _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 12657 # text = The two latter signals were nevertheless able to induce NF-kappa B translocation with a pattern in the band-shift assay indistinguishable from that observed using phorbol ester. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 two two NUM CD NumType=Card _ _ _ _ 3 latter latter ADJ JJ Degree=Pos _ _ _ _ 4 signals signal NOUN NNS Number=Plur _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 nevertheless nevertheless ADV RB _ _ _ _ _ 7 able able ADJ JJ Degree=Pos _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 induce induce VERB VB VerbForm=Inf _ _ _ _ 10 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 translocation translocation NOUN NN Number=Sing _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 pattern pattern NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 band band NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 shift shift NOUN NN Number=Sing _ _ _ _ 23 assay assay NOUN NN Number=Sing _ _ _ _ 24 indistinguishable indistinguishable ADJ JJ Degree=Pos _ _ _ _ 25 from from ADP IN _ _ _ _ _ 26 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 27 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 28 using use VERB VBG VerbForm=Ger _ _ _ _ 29 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 30 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 12658 # text = Our finding that induction of NF-kappa B by tumor necrosis factor or antibody to CD3 is not sufficient to induce HIV enhancer-dependent transcription in cloned T cells contrasts with results obtained in most lymphoblastoid T-cell lines and indicates that normal T lymphocytes differ from tumoral T cells in terms of requirements for HIV LTR activation. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 finding find VERB VBG VerbForm=Ger _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 induction induction NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 by by ADP IN _ _ _ _ _ 11 tumor tumor NOUN NN Number=Sing _ _ _ _ 12 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 antibody antibody PRON NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 CD3 CD3 NOUN NN Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 not not PART RB _ _ _ _ _ 20 sufficient sufficient ADJ JJ Degree=Pos _ _ _ _ 21 to to PART TO _ _ _ _ _ 22 induce induce VERB VB VerbForm=Inf _ _ _ _ 23 HIV HIV PROPN NNP Number=Sing _ _ _ _ 24 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 cloned cloned ADJ JJ Degree=Pos _ _ _ _ 30 T t PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ _ 32 contrasts contrast VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 results result NOUN NNS Number=Plur _ _ _ _ 35 obtained obtaine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 in in ADV RB _ _ _ _ _ 37 most most ADV RBS _ _ _ _ _ 38 lymphoblastoid lymphoblastoid ADJ JJ Degree=Pos _ _ _ _ 39 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 lines line NOUN NNS Number=Plur _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 indicates indicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 44 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 45 normal normal ADJ JJ Degree=Pos _ _ _ _ 46 T t NOUN NN Number=Sing _ _ _ _ 47 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 48 differ differ VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 49 from from ADP IN _ _ _ _ _ 50 tumoral tumoral ADJ JJ Degree=Pos _ _ _ _ 51 T t PROPN NNP Number=Sing _ _ _ _ 52 cells cell NOUN NNS Number=Plur _ _ _ _ 53 in in ADP IN _ _ _ _ _ 54 terms term NOUN NNS Number=Plur _ _ _ _ 55 of of ADP IN _ _ _ _ _ 56 requirements requirement NOUN NNS Number=Plur _ _ _ _ 57 for for ADP IN _ _ _ _ _ 58 HIV HIV PROPN NNP Number=Sing _ _ _ _ 59 LTR LTR PROPN NNP Number=Sing _ _ _ _ 60 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ _ # sent_id = 12659 # text = Furthermore, our results suggest that events linked to T-cell activation, in addition to NF-kappa B translocation per se, induce functional interactions of the NF-kappa B complex with the HIV enhancer. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 results result NOUN NNS Number=Plur _ _ _ _ 5 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 events event NOUN NNS Number=Plur _ _ _ _ 8 linked link VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 addition addition NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 translocation translocation NOUN NN Number=Sing _ _ _ _ 22 per per ADP IN _ _ _ _ _ 23 se se NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 induce induce SCONJ IN _ _ _ _ _ 26 functional functional ADJ JJ Degree=Pos _ _ _ _ 27 interactions interaction NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 32 kappa kappa NOUN NN Number=Sing _ _ _ _ 33 B b NOUN NN Number=Sing _ _ _ _ 34 complex complex NOUN NN Number=Sing _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 HIV HIV NOUN NN Number=Sing _ _ _ _ 38 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12660 # text = Document 0030013073 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013073 0030013073 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12661 # text = Human T-cell leukemia virus type 1 tax protein abrogates interleukin-2 dependence in a mouse T-cell line. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 type type NOUN NN Number=Sing _ _ _ _ 7 1 1 NUM CD NumType=Card _ _ _ _ 8 tax tax NOUN NN Number=Sing _ _ _ _ 9 protein protein ADV WRB PronType=Rel _ _ _ _ 10 abrogates abrogate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 2 2 NUM CD NumType=Card _ _ _ _ 14 dependence dependence NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 mouse mouse NOUN NN Number=Sing _ _ _ _ 18 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12662 # text = Human T-cell leukemia virus type 1 (HTLV-1) is the etiologic agent of adult T-cell leukemia. 1 Human human ADJ JJ Degree=Pos _ _ _ _ 2 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 5 virus virus NOUN NN Number=Sing _ _ _ _ 6 type type NOUN NN Number=Sing _ _ _ _ 7 1 1 NUM CD NumType=Card _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 HTLV HTLV NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 X LS _ _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 etiologic etiologic ADJ JJ Degree=Pos _ _ _ _ 16 agent agent NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 adult adult NOUN NN Number=Sing _ _ _ _ 19 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 12663 # text = Tax, the viral protein, is thought to be crucial in the development of the disease, since it transforms healthy T cells in vitro and induces tumors in transgenic animals. 1 Tax tax PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 viral viral ADJ JJ Degree=Pos _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 thought think VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 be be AUX VB VerbForm=Inf _ _ _ _ 11 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 development development NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 since since SCONJ IN _ _ _ _ _ 20 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 21 transforms transform VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 healthy healthy ADJ JJ Degree=Pos _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 cells cell NOUN NNS Number=Plur _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 vitro vitro NOUN NN Number=Sing _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 induces induce NOUN NNS Number=Plur _ _ _ _ 29 tumors tumor NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 transgenic transgenic ADJ JJ Degree=Pos _ _ _ _ 32 animals animal NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 12664 # text = We examined the effect of Tax activity on the growth of the interleukin-2 (IL-2)-dependent T-cell line CTLL-2. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effect effect NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 Tax tax NOUN NN Number=Sing _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 growth growth NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 2 2 NUM CD NumType=Card _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 23 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 line line NOUN NN Number=Sing _ _ _ _ 26 CTLL Ctll NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 12665 # text = Stable expression of Tax in CTLL-2 transformed cell growth from being IL-2 dependent to IL-2 independent. 1 Stable stable ADJ JJ Degree=Pos _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Tax tax PROPN NNP Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 CTLL CTLL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 transformed transform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 growth growth NOUN NN Number=Sing _ _ _ _ 12 from from SCONJ IN _ _ _ _ _ 13 being be AUX VBG VerbForm=Ger _ _ _ _ 14 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 2 2 NUM CD NumType=Card _ _ _ _ 17 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 2 2 NUM CD NumType=Card _ _ _ _ 22 independent independent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 12666 # text = Tax stimulated transcription through NF-kappaB and the cyclic AMP-responsive element-like sequence in the HTLV-1 promoter. 1 Tax tax NOUN NN Number=Sing _ _ _ _ 2 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 through through ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 cyclic cyclic ADJ JJ Degree=Pos _ _ _ _ 11 AMP Amp NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 14 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 like like ADJ JJ Degree=Pos _ _ _ _ 17 sequence sequence NOUN NN Number=Sing _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 HTLV HTLV NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 12667 # text = The finding of Tax mutants segregating these two pathways suggested that the NF-kappaB pathway was essential for IL-2-independent growth of CTLL-2 cells while the CRE pathway was unnecessary. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 finding finding NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Tax tax NOUN NN Number=Sing _ _ _ _ 5 mutants mutant NOUN NNS Number=Plur _ _ _ _ 6 segregating segregat VERB VBG VerbForm=Ger _ _ _ _ 7 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 8 two two NUM CD NumType=Card _ _ _ _ 9 pathways pathway NOUN NNS Number=Plur _ _ _ _ 10 suggested suggest VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 that that SCONJ IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 16 pathway pathway NOUN NN Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 essential essential ADJ JJ Degree=Pos _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 independent independent ADJ JJ Degree=Pos _ _ _ _ 25 growth growth NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 CTLL CTLL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 2 2 NUM CD NumType=Card _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 while while SCONJ IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 CRE Cre PROPN NNP Number=Sing _ _ _ _ 34 pathway pathway NOUN NN Number=Sing _ _ _ _ 35 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 36 unnecessary unnecessary ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 12668 # text = However, both pathways were necessary for another transformation-related activity (colony formation in soft agar) of CTLL-2/Tax. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 both both DET DT _ _ _ _ _ 4 pathways pathway NOUN NNS Number=Plur _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 necessary necessary ADJ JJ Degree=Pos _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 another another DET DT _ _ _ _ _ 9 transformation transformation NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 related related ADJ JJ Degree=Pos _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 colony colony NOUN NN Number=Sing _ _ _ _ 15 formation formation NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 soft soft ADJ JJ Degree=Pos _ _ _ _ 18 agar agar NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 CTLL CTLL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 25 Tax tax NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 12669 # text = Our results show that Tax has at least two distinct activities on T cells, and suggest that Tax plays a crucial role in IL-2-independent 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 Tax tax PROPN NNP Number=Sing _ _ _ _ 6 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 at at ADV RB _ _ _ _ _ 8 least least ADV RBS Degree=Sup _ _ _ _ 9 two two NUM CD NumType=Card _ _ _ _ 10 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 11 activities activity NOUN NNS Number=Plur _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 19 Tax tax NOUN NN Number=Sing _ _ _ _ 20 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 crucial crucial ADJ JJ Degree=Pos _ _ _ _ 23 role role NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 independent independent ADJ JJ Degree=Pos _ _ _ _ # sent_id = 12670 # text = T-cell transformation induced by HTLV-1, in addition to its well-known IL-2-dependent cell transformation. 1 T- T- SYM NFP _ _ _ _ SpaceAfter=No 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 transformation transformation NOUN NN Number=Sing _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 addition addition NOUN NN Number=Sing _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 well well ADV RB Degree=Pos _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 transformation transformation NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12671 # text = Document 0030013074 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013074 0030013074 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12672 # text = Lipopolysaccharide-induced E-selectin expression requires continuous presence of LPS and is inhibited by bactericidal/permeability-increasing protein. 1 Lipopolysaccharide Lipopolysaccharide VERB VB Mood=Imp|VerbForm=Fin _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 selectin selectin NOUN NN Number=Sing _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 continuous continuous ADJ JJ Degree=Pos _ _ _ _ 9 presence presence NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 LPS Lp NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 bactericidal bactericidal ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 17 / / PUNCT HYPH _ _ _ _ SpaceAfter=No 18 permeability permeability NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 increasing increase VERB VBG VerbForm=Ger _ _ _ _ 21 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12673 # text = Endothelial cells stimulated by LPS express E-selectin, which plays an important role in mediating neutrophil adhesion during inflammation. 1 Endothelial Endothelial ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 LPS LPS PROPN NNP Number=Sing _ _ _ _ 6 express express ADJ JJ Degree=Pos _ _ _ _ 7 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 selectin selectin VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 which which PRON WDT PronType=Rel _ _ _ _ 11 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 important important ADJ JJ Degree=Pos _ _ _ _ 14 role role NOUN NN Number=Sing _ _ _ _ 15 in in SCONJ IN _ _ _ _ _ 16 mediating mediat VERB VBG VerbForm=Ger _ _ _ _ 17 neutrophil neutrophil NOUN NN Number=Sing _ _ _ _ 18 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 19 during during ADP IN _ _ _ _ _ 20 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 12674 # text = E-selectin is induced within 1-2 h, peaks at 4-6 h, and gradually returns to basal level by 24 h. 1 E- E- SYM NFP _ _ _ _ SpaceAfter=No 2 selectin selectin NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 within within ADP IN _ _ _ _ _ 6 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 2 2 NUM CD NumType=Card _ _ _ _ 9 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 peaks peak NOUN NNS Number=Plur _ _ _ _ 12 at at ADP IN _ _ _ _ _ 13 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - SYM SYM _ _ _ _ SpaceAfter=No 15 6 6 NUM CD NumType=Card _ _ _ _ 16 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 gradually gradually ADV RB _ _ _ _ _ 20 returns return VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 to to ADP IN _ _ _ _ _ 22 basal basal ADJ JJ Degree=Pos _ _ _ _ 23 level level NOUN NN Number=Sing _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 24 24 NUM CD NumType=Card _ _ _ _ 26 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 12675 # text = rBPI21, a recombinant N-terminal fragment of human bactericidal/permeability-increasing protein (BPI), inhibited LPS-induced E-selectin expression when added at the same time as, and up to 6 h after, LPS. 1 rBPI21 rbpi21 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 5 N- N- NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 terminal terminal NOUN NN Number=Sing _ _ _ _ 7 fragment fragment NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 bactericidal bactericidal NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 / / PUNCT , _ _ _ _ SpaceAfter=No 12 permeability permeability NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 increasing increasing NOUN NN Number=Sing _ _ _ _ 15 protein protein NOUN NN Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 BPI BPI PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 LPS LPS NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 E- e- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 selectin selectin NOUN NN Number=Sing _ _ _ _ 26 expression expression NOUN NN Number=Sing _ _ _ _ 27 when when ADV WRB PronType=Int _ _ _ _ 28 added add VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 at at ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 same same ADJ JJ Degree=Pos _ _ _ _ 32 time time NOUN NN Number=Sing _ _ _ _ 33 as as ADV RB _ _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 and and CCONJ CC _ _ _ _ _ 36 up up ADP IN _ _ _ _ _ 37 to to ADP IN _ _ _ _ _ 38 6 6 NUM CD NumType=Card _ _ _ _ 39 h h NOUN NN Number=Sing _ _ _ _ 40 after after ADP IN _ _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 LPS LPS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 12676 # text = Delayed administration of rBPI21 also affected LPS-mediated activation of the nuclear factor, NF-kappa B. 1 Delayed delayed ADJ JJ Degree=Pos _ _ _ _ 2 administration administration NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 rBPI21 rBPI21 PROPN NNP Number=Sing _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 LPS Lps NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ 19 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 12677 # text = Two to 4 h following LPS addition to endothelial cells, when NF-kappa B was already activated, addition of rBPI21 resulted in marked reduction of NF-kappa B detectable at 4 or 6 h. 1 Two two NUM CD NumType=Card _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 4 4 NUM CD NumType=Card _ _ _ _ 4 h h NOUN NN Number=Sing _ _ _ _ 5 following follow VERB VBG VerbForm=Ger _ _ _ _ 6 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 7 addition addition NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 when when ADV WRB PronType=Int _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B b PROPN NNP Number=Sing _ _ _ _ 17 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 18 already already ADV RB _ _ _ _ _ 19 activated activated VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 addition addition NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 rBPI21 rbpi21 NUM CD NumType=Card _ _ _ _ 24 resulted result VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 marked mark VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 reduction reduction NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 kappa kappa PROPN NNP Number=Sing _ _ _ _ 32 B b PROPN NNP Number=Sing _ _ _ _ 33 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 34 at at ADP IN _ _ _ _ _ 35 4 4 NUM CD NumType=Card _ _ _ _ 36 or or CCONJ CC _ _ _ _ _ 37 6 6 NUM CD NumType=Card _ _ _ _ 38 h h NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 12678 # text = These results indicate that endothelial activation requires continuous presence of LPS, and rBPI21 acts to reverse LPS-mediated endothelial activation by interrupting the on-going LPS signal. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 requires require VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 continuous continuous ADJ JJ Degree=Pos _ _ _ _ 9 presence presence NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 LPS Lp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 rBPI21 rBPI21 NUM CD NumType=Card _ _ _ _ 15 acts act NOUN NNS Number=Plur _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 reverse reverse VERB VB VerbForm=Inf _ _ _ _ 18 LPS Lps ADV RB _ _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 endothelial endothelial ADJ JJ Degree=Pos _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ _ 23 by by SCONJ IN _ _ _ _ _ 24 interrupting interrupt VERB VBG VerbForm=Ger _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 on on ADV RB _ _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 going go VERB VBG VerbForm=Ger _ _ _ _ 29 LPS Lps ADJ JJ Degree=Pos _ _ _ _ 30 signal signal NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12679 # text = Document 0030013080 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013080 0030013080 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12680 # text = Soluble tumor necrosis factor receptors inhibit phorbol myristate acetate and cytokine-induced HIV-1 expression chronically infected U1 cells. 1 Soluble Soluble ADJ JJ Degree=Pos _ _ _ _ 2 tumor tumor NOUN NN Number=Sing _ _ _ _ 3 necrosis necrosis DET DT Number=Sing|PronType=Dem _ _ _ _ 4 factor factor NOUN NN Number=Sing _ _ _ _ 5 receptors receptor VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 inhibit inhibit ADJ JJ Degree=Pos _ _ _ _ 7 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 8 myristate myristate NOUN NN Number=Sing _ _ _ _ 9 acetate acetate NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 expression expression NOUN NN Number=Sing _ _ _ _ 18 chronically chronically ADV RB _ _ _ _ _ 19 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 U1 U1 NUM CD NumType=Card _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12681 # text = Recombinant human tumor necrosis factor (TNF) binding protein-1 (r-h TBP-1) and recombinant human soluble dimeric TNF receptor (rhu TNFR:Fc) were used to determine the relative contributions of TNF to phorbol myristate acetate (PMA) and cytokine-induced human immunodeficiency virus type 1 (HIV-1) replication in chronically infected cell lines. 1 Recombinant Recombinant ADJ JJ Degree=Pos _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 tumor tumor NOUN NN Number=Sing _ _ _ _ 4 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 r r NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 h h NOUN NN Number=Sing _ _ _ _ 17 TBP Tbp NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 1 1 X LS _ _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 recombinant recombinant ADJ JJ Degree=Pos _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 25 dimeric dimeric ADJ JJ Degree=Pos _ _ _ _ 26 TNF Tnf NOUN NN Number=Sing _ _ _ _ 27 receptor receptor NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 rhu rhu NOUN NN Number=Sing _ _ _ _ 30 TNFR: TNFR: NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 Fc Fc PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 34 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 35 to to PART TO _ _ _ _ _ 36 determine determine VERB VB VerbForm=Inf _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 relative relative ADJ JJ Degree=Pos _ _ _ _ 39 contributions contribution NOUN NNS Number=Plur _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 TNF TNF PROPN NNP Number=Sing _ _ _ _ 42 to to PART TO _ _ _ _ _ 43 phorbol phorbol VERB VB VerbForm=Inf _ _ _ _ 44 myristate myristate NOUN NN Number=Sing _ _ _ _ 45 acetate acetate NOUN NN Number=Sing _ _ _ _ 46 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 47 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 ) ) PUNCT -RRB- _ _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 cytokine cytokine VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 51 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 52 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 53 human human ADJ JJ Degree=Pos _ _ _ _ 54 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 55 virus virus NOUN NN Number=Sing _ _ _ _ 56 type type NOUN NN Number=Sing _ _ _ _ 57 1 1 NUM CD NumType=Card _ _ _ _ 58 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 59 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 60 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 61 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 62 ) ) PUNCT -RRB- _ _ _ _ _ 63 replication replication NOUN NN Number=Sing _ _ _ _ 64 in in ADP IN _ _ _ _ _ 65 chronically chronically ADV RB _ _ _ _ _ 66 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 67 cell cell NOUN NN Number=Sing _ _ _ _ 68 lines line NOUN NNS Number=Plur _ _ _ SpaceAfter=No 69 . . PUNCT . _ _ _ _ _ # sent_id = 12682 # text = Treatment of HIV-1-infected promonocytic U1 cells with r-h-TBP-1 or rhu TNFR:Fc reduced PMA-induced HIV-1 p24 antigen production in a concentration-dependent manner, with a maximal inhibition of approximately 90%. 1 Treatment treatment NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 promonocytic promonocytic ADJ JJ Degree=Pos _ _ _ _ 9 U1 u1 NUM CD NumType=Card _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 r-h r-h NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 TBP Tbp NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 or or CCONJ CC _ _ _ _ _ 18 rhu rhu PROPN NNP Number=Sing _ _ _ _ 19 TNFR:Fc TNFR:Fc PROPN NNP Number=Sing _ _ _ _ 20 reduced reduce VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 1 1 NUM CD NumType=Card _ _ _ _ 27 p24 p24 NUM CD NumType=Card _ _ _ _ 28 antigen antigen NUM CD NumType=Card _ _ _ _ 29 production production NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 concentration concentration NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 35 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 , , PUNCT , _ _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 40 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 approximately approximately ADV RB _ _ _ _ _ 43 90% 90% SYM NN Number=Sing _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 12683 # text = Maximal inhibition of p24 antigen production in T-lymphocytic ACH-2 cells was 47% with r-hTBP-1 and 42% with rhu TNFR:Fc. 1 Maximal Maximal ADJ JJ Degree=Pos _ _ _ _ 2 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 p24 p24 NUM CD NumType=Card _ _ _ _ 5 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 6 production production NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 T- T- PUNCT : _ _ _ _ SpaceAfter=No 9 lymphocytic lymphocytic ADJ JJ Degree=Pos _ _ _ _ 10 ACH ACh NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 2 2 NUM CD NumType=Card _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 47 47 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 % % SYM NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 r-hTBP r-hTBP NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 42 42 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 % % SYM NN Number=Sing _ _ _ _ 24 with with ADP IN _ _ _ _ _ 25 rhu rhu NOUN NN Number=Sing _ _ _ _ 26 TNFR: TNFR: NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 Fc. Fc. PROPN NNP Number=Sing _ _ _ _ # sent_id = 12684 # text = r-hTBP-1 and rhu TNFR:Fc also decreased p24 antigen synthesized by U1 cells in response to other stimuli, including phytohemagglutinin (PHA)-induced supernatant, granulocyte-macrophage colony-stimulating factor, interleukin-6, and TNF. 1 r-hTBP r-hTBp SYM NFP _ _ _ _ SpaceAfter=No 2 - - SYM SYM _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 rhu rhu NOUN NN Number=Sing _ _ _ _ 6 TNFR Tnfr NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 : : PUNCT : _ _ _ _ SpaceAfter=No 8 Fc Fc PROPN NNP Number=Sing _ _ _ _ 9 also also ADV RB _ _ _ _ _ 10 decreased decrease VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 p24 p24 NUM CD NumType=Card _ _ _ _ 12 antigen antigen NOUN NNS Number=Plur _ _ _ _ 13 synthesized synthesize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 U1 U1 NUM CD NumType=Card _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 response response NOUN NN Number=Sing _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 other other ADJ JJ Degree=Pos _ _ _ _ 21 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 including include VERB VBG VerbForm=Ger _ _ _ _ 24 phytohemagglutinin phytohemagglutinin NOUN NN Number=Sing _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 PHA PHA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 supernatant supernatant NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 35 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 stimulating stimulating NOUN NN Number=Sing _ _ _ _ 38 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 43 , , PUNCT , _ _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 12685 # text = Addition of r-hTBP-1 to U1 cells during the last 4 h of a 24 h incubation with PMA still inhibited p24 antigen production by 15%. U1 cells stimulated with 10(-7) M PMA released approximately 1 ng/ml endogenous TBP-1 with an initial peak observed at 1 h and a second peak at 24 h after PMA stimulation. 1 Addition Addition PROPN NNP Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 r-hTBP r-hTBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 to to ADP IN _ _ _ _ _ 7 U1 U1 NUM CD NumType=Card _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 during during ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 last last ADJ JJ Degree=Pos _ _ _ _ 12 4 4 NUM CD NumType=Card _ _ _ _ 13 h h NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 24 24 NUM CD NumType=Card _ _ _ _ 17 h h NOUN NN Number=Sing _ _ _ _ 18 incubation incubation NOUN NN Number=Sing _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 PMA PMA PROPN NNP Number=Sing _ _ _ _ 21 still still ADV RB _ _ _ _ _ 22 inhibited inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 p24 p24 NUM CD NumType=Card _ _ _ _ 24 antigen antigen ADJ JJ Degree=Pos _ _ _ _ 25 production production NOUN NN Number=Sing _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 15% 15% SYM NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ 29 U1 U1 NUM CD NumType=Card _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 (- (- PUNCT . _ _ _ _ SpaceAfter=No 35 7 7 NUM CD NumType=Card _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ _ 37 M be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 38 PMA PMA PROPN NNP Number=Sing _ _ _ _ 39 released release VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 40 approximately approximately ADV RB _ _ _ _ _ 41 1 1 NUM CD NumType=Card _ _ _ _ 42 ng ng NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 / / PUNCT , _ _ _ _ SpaceAfter=No 44 ml ml ADJ JJ Degree=Pos _ _ _ _ 45 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 46 TBP Tbp NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 1 1 NUM CD NumType=Card _ _ _ _ 49 with with ADP IN _ _ _ _ _ 50 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 51 initial initial ADJ JJ Degree=Pos _ _ _ _ 52 peak peak NOUN NN Number=Sing _ _ _ _ 53 observed observe VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 54 at at ADP IN _ _ _ _ _ 55 1 1 NUM CD NumType=Card _ _ _ _ 56 h h NOUN NN Number=Sing _ _ _ _ 57 and and CCONJ CC _ _ _ _ _ 58 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 59 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 60 peak peak NOUN NN Number=Sing _ _ _ _ 61 at at ADP IN _ _ _ _ _ 62 24 24 NUM CD NumType=Card _ _ _ _ 63 h h NOUN NN Number=Sing _ _ _ _ 64 after after ADP IN _ _ _ _ _ 65 PMA PMA PROPN NNP Number=Sing _ _ _ _ 66 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 67 . . PUNCT . _ _ _ _ _ # sent_id = 12686 # text = r-hTBP-1 also partially reversed inhibition of U1 cellular proliferation caused by PMA. 1 r-hTBP r-hTBp SYM NFP _ _ _ _ SpaceAfter=No 2 - - SYM SYM _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 also also ADV RB _ _ _ _ _ 5 partially partially ADV RB _ _ _ _ _ 6 reversed reverse VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 U1 U1 NUM CD NumType=Card _ _ _ _ 10 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 11 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 12 caused cause VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 12687 # text = Both r-hTBP-1 and rhu TNFR:Fc blocked PMA induction of nuclear factor (NK)- kappa B DNA-binding activity in U1 cells in association with decreases in HIV-1 replication. 1 Both both DET DT _ _ _ _ _ 2 r-hTBP r-htbp NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 rhu rhu PROPN NNP Number=Sing _ _ _ _ 7 TNFR:Fc TNFR:Fc PROPN NNP Number=Sing _ _ _ _ 8 blocked block VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 PMA PMA DET DT Definite=Ind|PronType=Art _ _ _ _ 10 induction induction NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 factor factor NOUN NN Number=Sing _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 NK NK PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ _ 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ _ 20 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 binding bind VERB VBG VerbForm=Ger _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 U1 U1 NUM CD NumType=Card _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 association association NOUN NN Number=Sing _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 decreases decrease NOUN NNS Number=Plur _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT , _ _ _ _ SpaceAfter=No 34 1 1 NUM CD NumType=Card _ _ _ _ 35 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 12688 # text = We conclude that soluble TNF receptors can inhibit stimuli-induced HIV-1 expression and NK- kappa B DNA-binding activity in chronically infected U1 cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 conclude conclude VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 5 TNF Tnf NOUN NN Number=Sing _ _ _ _ 6 receptors receptor NOUN NNS Number=Plur _ _ _ _ 7 can can AUX MD VerbForm=Fin _ _ _ _ 8 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 9 stimuli-induced stimuli-induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 NK Nk PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ _ 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B b PROPN NNP Number=Sing _ _ _ _ 19 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 binding binding VERB VBG VerbForm=Ger _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 chronically chronically ADV RB _ _ _ _ _ 25 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 U1 U1 NUM CD NumType=Card _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12689 # text = Document 0030013083 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013083 0030013083 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12690 # text = Transcriptional basis for hyporesponsiveness of the human inducible nitric oxide synthase gene to lipopolysaccharide/interferon-gamma. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 basis basis NOUN NN Number=Sing _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 hyporesponsiveness hyporesponsiveness NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 9 nitric nitric ADJ JJ Degree=Pos _ _ _ _ 10 oxide oxide NOUN NN Number=Sing _ _ _ _ 11 synthase synthase NOUN NN Number=Sing _ _ _ _ 12 gene gene NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 lipopolysaccharide/interferon-gamma lipopolysaccharide/interferon-gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12691 # text = The work reported here resolves, at the level of gene regulation, the controversy as to whether or not human monocytes/macrophages can produce nitric oxide (NO) when stimulated with lipopolysaccharide (LPS), with or without co-stimulation by interferon-gamma (IFN-gamma). 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 work work NOUN NN Number=Sing _ _ _ _ 3 reported report VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 here here ADV RB PronType=Dem _ _ _ _ 5 resolves resolf NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 at at ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 level level NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 controversy controversy NOUN NN Number=Sing _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 to to SCONJ IN _ _ _ _ _ 18 whether whether SCONJ IN _ _ _ _ _ 19 or or CCONJ CC _ _ _ _ _ 20 not not ADV RB _ _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 / / PUNCT , _ _ _ _ SpaceAfter=No 24 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 25 can can AUX MD VerbForm=Fin _ _ _ _ 26 produce produce VERB VB VerbForm=Inf _ _ _ _ 27 nitric nitric ADJ JJ Degree=Pos _ _ _ _ 28 oxide oxide NOUN NN Number=Sing _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 NO no INTJ UH _ _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 when when ADV WRB PronType=Int _ _ _ _ 33 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 with with ADP IN _ _ _ _ _ 35 lipopolysaccharide lipopolysaccharide NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 LPS Lp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 with with ADP IN _ _ _ _ _ 41 or or CCONJ CC _ _ _ _ _ 42 without without ADP IN _ _ _ _ _ 43 co-stimulation co-stimulation NOUN NN Number=Sing _ _ _ _ 44 by by ADP IN _ _ _ _ _ 45 interferon interferon ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 gamma gamma NOUN NN Number=Sing _ _ _ _ 48 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 49 IFN Ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 51 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 53 . . PUNCT . _ _ _ _ _ # sent_id = 12692 # text = Studies included structural comparison of the promoters for human and mouse inducible NO synthase (iNOS) genes, transfection and assay of human and mouse iNOS promoter regions in response to LPS +/- IFN-gamma, and electrophoretic mobility shift assays of kappa B response elements. 1 Studies study NOUN NNS Number=Plur _ _ _ _ 2 included include VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 structural structural ADJ JJ Degree=Pos _ _ _ _ 4 comparison comparison NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 promoters promoter NOUN NNS Number=Plur _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 human human NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 mouse mouse NOUN NN Number=Sing _ _ _ _ 12 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 13 NO no DET DT _ _ _ _ _ 14 synthase synthase NOUN NN Number=Sing _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 iNOS inos NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 transfection transfection NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 assay assay NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 human human NOUN NN Number=Sing _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 mouse mouse NOUN NN Number=Sing _ _ _ _ 27 iNOS inos NOUN NN Number=Sing _ _ _ _ 28 promoter promoter NOUN NN Number=Sing _ _ _ _ 29 regions region NOUN NNS Number=Plur _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 response response NOUN NN Number=Sing _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 LPS LPS NOUN NNS Number=Plur _ _ _ _ 34 +/- +/- PUNCT : _ _ _ _ _ 35 IFN IFN NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 gamma gamma NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 41 mobility mobility NOUN NN Number=Sing _ _ _ _ 42 shift shift NOUN NN Number=Sing _ _ _ _ 43 assays assay NOUN NNS Number=Plur _ _ _ _ 44 of of ADP IN _ _ _ _ _ 45 kappa kappa NOUN NN Number=Sing _ _ _ _ 46 B b NOUN NN Number=Sing _ _ _ _ 47 response response NOUN NN Number=Sing _ _ _ _ 48 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 12693 # text = Two explanations for hyporesponsiveness of the human iNOS promoter to LPS +/- IFN-gamma were found: (1) multiple inactivating nucleotide substitutions in the human counterpart of the enhancer element that has been shown to regulate LPS/IFN-gamma induced expression of the mouse iNOS gene; and (2) and absence of one or more nuclear factors in human macrophages (e.g., an LPS-inducible nuclear factor-kappa 1 Two two NUM CD NumType=Card _ _ _ _ 2 explanations explanation NOUN NNS Number=Plur _ _ _ _ 3 for for ADP IN _ _ _ _ _ 4 hyporesponsiveness hyporesponsiveness NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 human human ADJ JJ Degree=Pos _ _ _ _ 8 iNOS inos NOUN NN Number=Sing _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 LPS LPS NOUN NNS Number=Plur _ _ _ _ 12 +/- +/- PUNCT : _ _ _ _ _ 13 IFN IFN NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 gamma gamma NOUN NN Number=Sing _ _ _ _ 16 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 18 : : PUNCT : _ _ _ _ _ 19 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 20 1 1 X LS _ _ _ _ SpaceAfter=No 21 ) ) PUNCT -RRB- _ _ _ _ _ 22 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 23 inactivating inactivat VERB VBG VerbForm=Ger _ _ _ _ 24 nucleotide nucleotide NOUN NN Number=Sing _ _ _ _ 25 substitutions substitution NOUN NNS Number=Plur _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 human human ADJ JJ Degree=Pos _ _ _ _ 29 counterpart counterpart NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 33 element element NOUN NN Number=Sing _ _ _ _ 34 that that PRON WDT PronType=Rel _ _ _ _ 35 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 37 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 to to PART TO _ _ _ _ _ 39 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 40 LPS/IFN Lps/ifn NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 gamma gamma NOUN NN Number=Sing _ _ _ _ 43 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 44 expression expression NOUN NN Number=Sing _ _ _ _ 45 of of ADP IN _ _ _ _ _ 46 the the DET DT Definite=Def|PronType=Art _ _ _ _ 47 mouse mouse NOUN NN Number=Sing _ _ _ _ 48 iNOS inos NOUN NN Number=Sing _ _ _ _ 49 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 50 ; ; PUNCT , _ _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 53 2 2 X LS _ _ _ _ SpaceAfter=No 54 ) ) PUNCT -RRB- _ _ _ _ _ 55 and and CCONJ CC _ _ _ _ _ 56 absence absence NOUN NN Number=Sing _ _ _ _ 57 of of ADP IN _ _ _ _ _ 58 one one NUM CD NumType=Card _ _ _ _ 59 or or CCONJ CC _ _ _ _ _ 60 more more ADJ JJR Degree=Cmp _ _ _ _ 61 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 62 factors factor NOUN NNS Number=Plur _ _ _ _ 63 in in ADP IN _ _ _ _ _ 64 human human ADJ JJ Degree=Pos _ _ _ _ 65 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 66 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 67 e.g. e.g. X FW _ _ _ _ SpaceAfter=No 68 , , PUNCT , _ _ _ _ _ 69 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 70 LPS LPS ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 71 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 72 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 73 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 74 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 75 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 76 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 12694 # text = B/Rel complex), that is (are) required for maximal expression of the gene. 1 B benefit ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 / / PUNCT , _ _ _ _ SpaceAfter=No 3 Rel Rel ADJ JJ Degree=Pos _ _ _ _ 4 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 12695 # text = The importance of resolution of this controversy is that future research in this area should be directed toward the understanding of alternative mechanisms that can result in the successful production of NO. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 importance importance NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 resolution resolution NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 7 controversy controversy NOUN NN Number=Sing _ _ _ _ 8 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 future future ADJ JJ Degree=Pos _ _ _ _ 11 research research NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 14 area area NOUN NN Number=Sing _ _ _ _ 15 should should AUX MD VerbForm=Fin _ _ _ _ 16 be be AUX VB VerbForm=Inf _ _ _ _ 17 directed direct VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 toward toward ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 understanding understanding NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 alternative alternative ADJ JJ Degree=Pos _ _ _ _ 23 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 can can AUX MD VerbForm=Fin _ _ _ _ 26 result result VERB VB VerbForm=Inf _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 successful successful ADJ JJ Degree=Pos _ _ _ _ 30 production production NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 NO no DET DT _ _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12696 # text = Document 0030013088 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013088 0030013088 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12697 # text = SRC-related proto-oncogenes and transcription factors in primary human T cells: modulation by cyclosporin A and FK506. 1 SRC Src NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 related related ADJ JJ Degree=Pos _ _ _ _ 4 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 -oncogenes -oncogene NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factors factor NOUN NNS Number=Plur _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 primary primary ADJ JJ Degree=Pos _ _ _ _ 11 human human ADJ JJ Degree=Pos _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 : : PUNCT : _ _ _ _ _ 15 modulation modulation NOUN NN Number=Sing _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 cyclosporin cyclosporin PROPN NNP Number=Sing _ _ _ _ 18 A a PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 FK506 FK506 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12698 # text = Activation of T lymphocytes induces transcription of genes encoding for lymphokines. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 lymphocytes lymphocyte VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 genes gene NOUN NNS Number=Plur _ _ _ _ 9 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 lymphokines lymphokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 12699 # text = Interleukin-2 (IL-2) gene expression is controlled transcriptionally by the cooperative activity of specific trans-activating factors that bind to the IL-2 enhancer. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 2 2 NUM CD NumType=Card _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 transcriptionally transcriptionally ADV RB _ _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 cooperative cooperative ADJ JJ Degree=Pos _ _ _ _ 17 activity activity NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 specific specific ADJ JJ Degree=Pos _ _ _ _ 20 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 - - PUNCT , _ _ _ _ SpaceAfter=No 22 activating activat VERB VBG VerbForm=Ger _ _ _ _ 23 factors factor NOUN NNS Number=Plur _ _ _ _ 24 that that PRON WDT PronType=Rel _ _ _ _ 25 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 26 to to ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 2 2 NUM CD NumType=Card _ _ _ _ 31 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 12700 # text = Cyclosporin A (CsA) and FK506 inhibit the production of IL-2 in T lymphocytes at the level of gene transcription. 1 Cyclosporin Cyclosporin PROPN NNP Number=Sing _ _ _ _ 2 A A PROPN NNP Number=Sing _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 CsA csa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 ) ) PUNCT -RRB- _ _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 FK506 FK506 PROPN NNP Number=Sing _ _ _ _ 8 inhibit inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 production production NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 2 2 NUM CD NumType=Card _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 18 at at ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 level level NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 gene gene NOUN NN Number=Sing _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 12701 # text = A member of the src gene family, the lymphocyte-specific protein tyrosine kinase, p56lck, has been implicated in IL-2 production. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 member member NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 src src ADJ JJ Degree=Pos _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 family family NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 specific specific ADJ JJ Degree=Pos _ _ _ _ 13 protein protein NOUN NN Number=Sing _ _ _ _ 14 tyrosine tyrosine NOUN NN Number=Sing _ _ _ _ 15 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 p56 p56 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 lck lck NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 22 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 2 2 NUM CD NumType=Card _ _ _ _ 27 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 12702 # text = CsA was found not to inhibit lck gene expression, nor the activity of the lck gene product. 1 CsA csa PROPN NNP Number=Sing _ _ _ _ 2 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 3 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 not not ADV RB _ _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 inhibit inhibit VERB VB VerbForm=Inf _ _ _ _ 7 lck lck NOUN NN Number=Sing _ _ _ _ 8 gene gene NOUN NN Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 nor nor CCONJ CC _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 lck lck NOUN NN Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 product product NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 12703 # text = However, CsA and FK506 inhibit the appearance of DNA binding activity of factors that bind to the NF-AT and AP-1 sites in the IL-2 enhancer. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 CsA csa PROPN NNP Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 FK506 FK506 PROPN NNP Number=Sing _ _ _ _ 6 inhibit inhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 appearance appearance NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ _ 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 factors factor NOUN NNS Number=Plur _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 bind bind VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 AT AT NOUN NN Number=Sing _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 sites site NOUN NNS Number=Plur _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 2 2 NUM CD NumType=Card _ _ _ _ 32 enhancer enhancer NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 12704 # text = Since the induction of NF-AT and AP-1 is induced by the same stimuli that stimulate IL-2 production, these results indicate that the immunosuppressant action of CsA and FK506 is exerted at the level of these trans-activating factors. 1 Since since SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 induction induction NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 AT AT PROPN NNP Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 AP Ap PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 same same ADJ JJ Degree=Pos _ _ _ _ 17 stimuli stimuli NOUN NNS Number=Plur _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 stimulate stimulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ _ 23 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 26 results result NOUN NNS Number=Plur _ _ _ _ 27 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 that that SCONJ IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 immunosuppressant immunosuppressant ADJ JJ Degree=Pos _ _ _ _ 31 action action NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 CsA csa PROPN NNP Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 FK506 FK506 PROPN NNP Number=Sing _ _ _ _ 36 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 37 exerted exert VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 38 at at ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 level level NOUN NN Number=Sing _ _ _ _ 41 of of ADP IN _ _ _ _ _ 42 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 43 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 - - PUNCT , _ _ _ _ SpaceAfter=No 45 activating activat VERB VBG VerbForm=Ger _ _ _ _ 46 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12705 # text = Document 0030013089 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013089 0030013089 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12706 # text = Transcriptional regulation during T-cell development: the alpha TCR gene as a molecular model. 1 Transcriptional Transcriptional ADJ JJ Degree=Pos _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 during during ADP IN _ _ _ _ _ 4 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 : : PUNCT : _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 alpha alpha NOUN NN Number=Sing _ _ _ _ 10 TCR Tcr NOUN NN Number=Sing _ _ _ _ 11 gene gene NOUN NN Number=Sing _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 15 model model NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12707 # text = The regulation of gene expression during lymphocyte differentiation is a complex process involving interactions between multiple positive and negative transcriptional regulatory elements. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 gene gene ADJ JJ Degree=Pos _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 during during ADP IN _ _ _ _ _ 7 lymphocyte lymphocyte NOUN NN Number=Sing _ _ _ _ 8 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 complex complex NOUN NN Number=Sing _ _ _ _ 12 process process NOUN NN Number=Sing _ _ _ _ 13 involving involve VERB VBG VerbForm=Ger _ _ _ _ 14 interactions interaction NOUN NNS Number=Plur _ _ _ _ 15 between between ADP IN _ _ _ _ _ 16 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 17 positive positive ADJ JJ Degree=Pos _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 negative negative ADJ JJ Degree=Pos _ _ _ _ 20 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 21 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 22 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 12708 # text = In this article, transcriptional regulation of the archetypal T-cell-specific gene, alpha TCR, is discussed. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 article article NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 6 regulation regulation NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 archetypal archetypal ADJ JJ Degree=Pos _ _ _ _ 10 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 alpha alpha ADP IN _ _ _ _ _ 17 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 discussed discuss VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 12709 # text = Major recent developments, including the identification of novel families of transcription factors that regulate multiple T-cell genes during thymocyte ontogeny and T-cell activation, are described. 1 Major major ADJ JJ Degree=Pos _ _ _ _ 2 recent recent ADJ JJ Degree=Pos _ _ _ _ 3 developments development NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 including include VERB VBG VerbForm=Ger _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 identification identification NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 novel novel NOUN NN Number=Sing _ _ _ _ 10 families family NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 factors factor NOUN NNS Number=Plur _ _ _ _ 14 that that PRON WDT PronType=Rel _ _ _ _ 15 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 16 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 17 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 cell cell NOUN NN Number=Sing _ _ _ _ 19 genes gene NOUN NNS Number=Plur _ _ _ _ 20 during during ADP IN _ _ _ _ _ 21 thymocyte thymocyte NOUN NN Number=Sing _ _ _ _ 22 ontogeny ontogeny NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 cell cell NOUN NN Number=Sing _ _ _ _ 26 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12710 # text = Document 0030013093 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013093 0030013093 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12711 # text = Regulation of GM-CSF gene transcription by core-binding factor. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 CSF CSF PROPN NNP Number=Sing _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 core core NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12712 # text = GM-CSF gene activation in T cells is known to involve the transcription factors nuclear factor-kappa B, AP-1, NFAT, and Sp1. 1 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 CSF CSF PROPN NNP Number=Sing _ _ _ _ 4 gene gene NOUN NN Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 T t PROPN NNP Number=Sing _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 involve involve VERB VB VerbForm=Inf _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factors factor NOUN NNS Number=Plur _ _ _ _ 16 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 NFAT NFAT NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 Sp1 Sp1 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 12713 # text = Here we demonstrate that the human GM-CSF promoter and enhancer also encompass binding sites for core-binding factor (CBF). 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 CSF CSF PROPN NNP Number=Sing _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 13 also also ADV RB _ _ _ _ _ 14 encompass encompass SCONJ IN _ _ _ _ _ 15 binding bind VERB VBG VerbForm=Ger _ _ _ _ 16 sites site NOUN NNS Number=Plur _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 core core NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 binding binding VERB VBG VerbForm=Ger _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 CBF CBF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 12714 # text = Significantly, the CBF sites are in each case contained within the minimum essential core regions required for inducible activation of transcription. 1 Significantly significantly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 CBF Cbf NOUN NN Number=Sing _ _ _ _ 5 sites site NOUN NNS Number=Plur _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 each each DET DT _ _ _ _ _ 9 case case NOUN NN Number=Sing _ _ _ _ 10 contained contain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 within within ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 minimum minimum ADJ JJ Degree=Pos _ _ _ _ 14 essential essential ADJ JJ Degree=Pos _ _ _ _ 15 core core NOUN NN Number=Sing _ _ _ _ 16 regions region NOUN NNS Number=Plur _ _ _ _ 17 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 for for ADP IN _ _ _ _ _ 19 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 12715 # text = Furthermore, these core regions of the enhancer and promoter each encompass closely linked binding sites for CBF, AP-1, and NFATp. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 core core ADJ JJ Degree=Pos _ _ _ _ 5 regions region NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 enhancer enhancer NOUN NN Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 promoter promoter VERB VB VerbForm=Inf _ _ _ _ 11 each each DET DT _ _ _ _ _ 12 encompass encompass NOUN NN Number=Sing _ _ _ _ 13 closely closely ADV RB _ _ _ _ _ 14 linked link VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 binding bind VERB VBG VerbForm=Ger _ _ _ _ 16 sites site NOUN NNS Number=Plur _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 CBF CBF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 AP Ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 NFATp NFATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 12716 # text = The GM-CSF promoter CBF site TGTGGTCA is located 51 bp upstream of the transcription start site and also overlaps a YY-1 binding site. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 CSF CSF PROPN NNP Number=Sing _ _ _ _ 5 promoter promoter VERB VB VerbForm=Inf _ _ _ _ 6 CBF CBF PROPN NNP Number=Sing _ _ _ _ 7 site site NOUN NN Number=Sing _ _ _ _ 8 TGTGGTCA TGTGGTCA NOUN NN Number=Sing _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 51 51 NUM CD NumType=Card _ _ _ _ 12 bp bp NOUN NN Number=Sing _ _ _ _ 13 upstream upstream NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 start start NOUN NN Number=Sing _ _ _ _ 18 site site NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 also also ADV RB _ _ _ _ _ 21 overlaps overlaps ADV RB _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 YY Yy NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 1 1 NUM CD NumType=Card _ _ _ _ 26 binding binding VERB VBG VerbForm=Ger _ _ _ _ 27 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 12717 # text = A 2-bp mutation within the CBF site resulted in a 2-3-fold decrease in the activities of both a 69-bp proximal promoter fragment and a 627-bp full-length promoter fragment. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 bp bp NOUN NN Number=Sing _ _ _ _ 5 mutation mutation NOUN NN Number=Sing _ _ _ _ 6 within within ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 CBF CBF PROPN NNP Number=Sing _ _ _ _ 9 site site NOUN NN Number=Sing _ _ _ _ 10 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 3 3 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 fold fold NOUN NN Number=Sing _ _ _ _ 18 decrease decrease NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 activities activity NOUN NNS Number=Plur _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 both both CCONJ CC _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 69 69 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 bp bp NOUN NN Number=Sing _ _ _ _ 28 proximal proximal NOUN NN Number=Sing _ _ _ _ 29 promoter promoter NOUN NN Number=Sing _ _ _ _ 30 fragment fragment NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 627 627 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 bp bp NOUN NN Number=Sing _ _ _ _ 36 full full ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 length length NOUN NN Number=Sing _ _ _ _ 39 promoter promoter NOUN NN Number=Sing _ _ _ _ 40 fragment fragment NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 12718 # text = Stepwise deletions into the proximal promoter also revealed that the CBF site, but not the YY-1 site, was required for efficient induction of transcriptional activation. 1 Stepwise Stepwise VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 2 deletions deletion NOUN NNS Number=Plur _ _ _ _ 3 into into ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 6 promoter promoter NOUN NN Number=Sing _ _ _ _ 7 also also ADV RB _ _ _ _ _ 8 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 CBF CBF PROPN NNP Number=Sing _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 but but CCONJ CC _ _ _ _ _ 15 not not ADV RB _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 YY Yy NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 efficient efficient ADJ JJ Degree=Pos _ _ _ _ 26 induction induction NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 12719 # text = The AML1 and CBF beta genes that encode CBF each have the ability to influence cell growth and differentiation and have been implicated as proto-oncogenes in acute myeloid leukemia. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 AML1 Aml1 PROPN NNP Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 CBF CBF PROPN NNP Number=Sing _ _ _ _ 5 beta beta NOUN NN Number=Sing _ _ _ _ 6 genes gene NOUN NNS Number=Plur _ _ _ _ 7 that that PRON WDT PronType=Rel _ _ _ _ 8 encode encode VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 CBF Cbf PRON PRP Case=Acc|Number=Sing|Person=1|PronType=Prs|Reflex=Yes _ _ _ _ 10 each each DET DT _ _ _ _ _ 11 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 ability ability NOUN NN Number=Sing _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 influence influence VERB VB VerbForm=Inf _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 growth growth NOUN NN Number=Sing _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 23 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 as as ADP IN _ _ _ _ _ 25 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 oncogenes oncogene NOUN NNS Number=Plur _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 acute acute ADJ JJ Degree=Pos _ _ _ _ 30 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 31 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 12720 # text = This study adds GM-CSF to a growing list of cytokines and receptors that are regulated by CBF and which control the growth, differentiation, and activation of hemopoietic cells. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 adds add VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 CSF CSF PROPN NNP Number=Sing _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 growing grow VERB VBG VerbForm=Ger _ _ _ _ 10 list list NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 receptors receptor NOUN NNS Number=Plur _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 CBF CBF PROPN NNP Number=Sing _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 which which PRON WDT PronType=Int _ _ _ _ 22 control control VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 growth growth NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 activation activation NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 hemopoietic hemopoietic ADJ JJ Degree=Pos _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 12721 # text = The GM-CSF locus may represent one of several target genes that are dysregulated in acute myeloid leukemia. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 GM GM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 CSF CSF PROPN NNP Number=Sing _ _ _ _ 5 locus locus PROPN NNP Number=Sing _ _ _ _ 6 may may AUX MD VerbForm=Fin _ _ _ _ 7 represent represent VERB VB VerbForm=Inf _ _ _ _ 8 one one NUM CD NumType=Card _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 several several ADJ JJ Degree=Pos _ _ _ _ 11 target target NOUN NN Number=Sing _ _ _ _ 12 genes gene NOUN NNS Number=Plur _ _ _ _ 13 that that PRON WDT PronType=Rel _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 dysregulated dysregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 acute acute ADJ JJ Degree=Pos _ _ _ _ 18 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 19 leukemia leukemia NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12722 # text = Document 0030013094 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013094 0030013094 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12723 # text = HIV-1 1 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -1 -1 NUM CD NumType=Card _ _ _ _ # sent_id = 12724 # text = Tat potentiates TNF-induced NF-kappa B activation and cytotoxicity by altering the cellular redox state. 1 Tat Tat PROPN NNP Number=Sing _ _ _ _ 2 potentiates potentiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 cytotoxicity cytotoxicity NOUN NN Number=Sing _ _ _ _ 13 by by SCONJ IN _ _ _ _ _ 14 altering alter VERB VBG VerbForm=Ger _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 17 redox redox NOUN NN Number=Sing _ _ _ _ 18 state state NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12725 # text = This study demonstrates that human immunodeficiency virus type 1 (HIV-1) 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 study study NOUN NN Number=Sing _ _ _ _ 3 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 human human ADJ JJ Degree=Pos _ _ _ _ 6 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 7 virus virus NOUN NN Number=Sing _ _ _ _ 8 type type NOUN NN Number=Sing _ _ _ _ 9 1 1 NUM CD NumType=Card _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ # sent_id = 12726 # text = Tat protein amplifies the activity of tumor necrosis factor (TNF), a cytokine that stimulates HIV-1 replication through activation of NF-kappa B. In HeLa cells stably transfected with the HIV-1 tat gene (HeLa-tat cells), expression of the Tat protein enhanced both TNF-induced activation of NF-kappa B and TNF-mediated cytotoxicity. 1 Tat Tat NOUN NN Number=Sing _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ 3 amplifies amplify VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 tumor tumor NOUN NN Number=Sing _ _ _ _ 8 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 9 factor factor NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 16 that that PRON WDT PronType=Rel _ _ _ _ 17 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 1 1 NUM CD NumType=Card _ _ _ _ 21 replication replication NOUN NN Number=Sing _ _ _ _ 22 through through ADP IN _ _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa PROPN NNP Number=Sing _ _ _ _ 28 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ 30 In in ADP IN _ _ _ _ _ 31 HeLa Hela PROPN NNP Number=Sing _ _ _ _ 32 cells cell NOUN NNS Number=Plur _ _ _ _ 33 stably stably ADV RB _ _ _ _ _ 34 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ _ 40 tat tat NOUN NN Number=Sing _ _ _ _ 41 gene gene NOUN NN Number=Sing _ _ _ _ 42 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 43 HeLa HeLa NOUN NN Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 tat tat NOUN NN Number=Sing _ _ _ _ 46 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 47 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 expression expression NOUN NN Number=Sing _ _ _ _ 50 of of ADP IN _ _ _ _ _ 51 the the DET DT Definite=Def|PronType=Art _ _ _ _ 52 Tat Tat PROPN NNP Number=Sing _ _ _ _ 53 protein protein NOUN NN Number=Sing _ _ _ _ 54 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 55 both both CCONJ CC _ _ _ _ _ 56 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 59 activation activation NOUN NN Number=Sing _ _ _ _ 60 of of ADP IN _ _ _ _ _ 61 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 62 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 63 kappa kappa PROPN NNP Number=Sing _ _ _ _ 64 B b PROPN NNP Number=Sing _ _ _ _ 65 and and CCONJ CC _ _ _ _ _ 66 TNF Tnf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 67 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 68 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 69 cytotoxicity cytotoxicity NOUN NN Number=Sing _ _ _ SpaceAfter=No 70 . . PUNCT . _ _ _ _ _ # sent_id = 12727 # text = A similar potentiation of TNF effects was observed in Jurkat T cells and HeLa cells treated with soluble Tat protein. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 similar similar ADJ JJ Degree=Pos _ _ _ _ 3 potentiation potentiation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 TNF Tnf NOUN NN Number=Sing _ _ _ _ 6 effects effect NOUN NNS Number=Plur _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 11 T T PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 HeLa Hela PROPN NNP Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 soluble soluble ADJ JJ Degree=Pos _ _ _ _ 19 Tat Tat PROPN NNP Number=Sing _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 12728 # text = TNF-mediated activation of NF-kappa B and cytotoxicity involves the intracellular formation of reactive oxygen intermediates. 1 TNF Tnf ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 cytotoxicity cytotoxicity NOUN NN Number=Sing _ _ _ _ 12 involves involf VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 15 formation formation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 reactive reactive ADJ JJ Degree=Pos _ _ _ _ 18 oxygen oxygen NOUN NN Number=Sing _ _ _ _ 19 intermediates intermediate NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 12729 # text = Therefore, Tat-mediated effects on the cellular redox state were analyzed. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Tat Tat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 effects effect NOUN NNS Number=Plur _ _ _ _ 7 on on ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 10 redox redox NOUN NN Number=Sing _ _ _ _ 11 state state NOUN NN Number=Sing _ _ _ _ 12 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 analyzed analyze VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 14 . . PUNCT . _ _ _ _ _ # sent_id = 12730 # text = In both T cells and HeLa cells HIV-1 1 In in ADP IN _ _ _ _ _ 2 both both DET DT _ _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 HeLa Hela NOUN NN Number=Sing _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 HIV HIV AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 9 -1 -1 NUM CD NumType=Card _ _ _ _ # sent_id = 12731 # text = Tat suppressed the expression of Mn-dependent superoxide dismutase (Mn-SOD), a mitochondrial enzyme that is part of the cellular defense system against oxidative stress. 1 Tat Tat PROPN NNP Number=Sing _ _ _ _ 2 suppressed suppress VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 Mn Mn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 9 superoxide superoxide NOUN NN Number=Sing _ _ _ _ 10 dismutase dismutase NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 Mn Mn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 SOD SOD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 mitochondrial mitochondrial ADJ JJ Degree=Pos _ _ _ _ 19 enzyme enzyme NOUN NN Number=Sing _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 part part NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 26 defense defense NOUN NN Number=Sing _ _ _ _ 27 system system NOUN NN Number=Sing _ _ _ _ 28 against against ADP IN _ _ _ _ _ 29 oxidative oxidative ADJ JJ Degree=Pos _ _ _ _ 30 stress stress NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 12732 # text = Thus, Mn-SOD RNA protein levels and activity were markedly reduced in the presence of Tat. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 Mn Mn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 SOD SOD PROPN NNP Number=Sing _ _ _ _ 6 RNA RNa PROPN NNP Number=Sing _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 markedly markedly ADV RB _ _ _ _ _ 13 reduced reduce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 presence presence NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 Tat Tat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 12733 # text = Decreased Mn-SOD expression was associated with decreased levels of glutathione and a lower ratio of reduced:oxidized glutathione. 1 Decreased Decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 Mn Mn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 SOD SOD PROPN NNP Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 levels level NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 glutathione glutathione NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 lower lower ADJ JJR Degree=Cmp _ _ _ _ 16 ratio ratio NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 19 : : PUNCT : _ _ _ _ SpaceAfter=No 20 oxidized oxidize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 glutathione glutathione NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 12734 # text = A truncated Tat protein (Tat1-72), known to transactivate the HIV-1 long terminal repeat (LTR), no longer affected Mn-SOD expression, the cellular redox state or TNF-mediated cytotoxicity. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 truncated truncated ADJ JJ Degree=Pos _ _ _ _ 3 Tat Tat NOUN NN Number=Sing _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 Tat Tat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 - - SYM SYM _ _ _ _ SpaceAfter=No 9 72 72 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 to to PART TO _ _ _ _ _ 14 transactivate transactivate VERB VB VerbForm=Inf _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 long long ADJ JJ Degree=Pos _ _ _ _ 20 terminal terminal NOUN NN Number=Sing _ _ _ _ 21 repeat repeat NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 no no ADV RB _ _ _ _ _ 27 longer longer ADV RBR Degree=Cmp _ _ _ _ 28 affected affect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 29 Mn Mn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 SOD SOD PROPN NNP Number=Sing _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 36 redox redox NOUN NN Number=Sing _ _ _ _ 37 state state NOUN NN Number=Sing _ _ _ _ 38 or or CCONJ CC _ _ _ _ _ 39 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 cytotoxicity cytotoxicity NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 12735 # text = Thus, our experiments demonstrate that the C-terminal region of HIV-1 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 experiments experiment NOUN NNS Number=Plur _ _ _ _ 5 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 C- c- NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 terminal terminal NOUN NN Number=Sing _ _ _ _ 10 region region NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 -1 -1 NUM CD NumType=Card _ _ _ _ # sent_id = 12736 # text = Tat is required to suppress Mn-SOD expression and to induce pro-oxidative conditions reflected by a drop in reduced glutathione (GSH) and the GSH:oxidized GSH (GSSG) ratio. 1 Tat Tat PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 suppress suppress VERB VB VerbForm=Inf _ _ _ _ 6 Mn Mn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 SOD SOD PROPN NNP Number=Sing _ _ _ _ 9 expression expression NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 induce induce VERB VB VerbForm=Inf _ _ _ _ 13 pro-oxidative pro-oxidative ADJ JJ Degree=Pos _ _ _ _ 14 conditions condition NOUN NNS Number=Plur _ _ _ _ 15 reflected reflect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 drop drop NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 glutathione glutathione NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 GSH GSH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 GSH GSh NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 : : PUNCT : _ _ _ _ SpaceAfter=No 29 oxidized oxidize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 GSH GSH PROPN NNP Number=Sing _ _ _ _ 31 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 32 GSSG GSSG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 ) ) PUNCT -RRB- _ _ _ _ _ 34 ratio ratio NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 12737 # text = (ABSTRACT TRUNCATED AT 250 WORDS) 1 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 2 ABSTRACT ABSTRACT X GW _ _ _ _ _ 3 TRUNCATED Truncate VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 AT at ADV RB _ _ _ _ _ 5 250 250 NUM CD NumType=Card _ _ _ _ 6 WORDS words NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12738 # text = Document 0030013096 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013096 0030013096 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12739 # text = E2F-1 and a cyclin-like DNA repair enzyme, uracil-DNA glycosylase, provide evidence for an autoregulatory mechanism for transcription. 1 E2F E2f NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 cyclin cyclin NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 like like ADJ JJ Degree=Pos _ _ _ _ 9 DNA dna NOUN NN Number=Sing _ _ _ _ 10 repair repair NOUN NN Number=Sing _ _ _ _ 11 enzyme enzyme NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 uracil uracil NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 DNA dna NOUN NN Number=Sing _ _ _ _ 16 glycosylase glycosylase NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 provide provide VERB VB VerbForm=Inf _ _ _ _ 19 evidence evidence NOUN NN Number=Sing _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 autoregulatory autoregulatory ADJ JJ Degree=Pos _ _ _ _ 23 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12740 # text = The cell cycle-dependent transcription factor, E2F-1, regulates the cyclin-like species of the DNA repair enzyme uracil-DNA glycosylase (UDG) gene in human osteosarcoma (Saos-2) cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 cell cell NOUN NN Number=Sing _ _ _ _ 3 cycle cycle NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 E2F E2F NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 cyclin cyclin NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 like like ADJ JJ Degree=Pos _ _ _ _ 18 species species NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 DNA dna NOUN NN Number=Sing _ _ _ _ 22 repair repair NOUN NN Number=Sing _ _ _ _ 23 enzyme enzyme NOUN NN Number=Sing _ _ _ _ 24 uracil uracil NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 DNA dna NOUN NN Number=Sing _ _ _ _ 27 glycosylase glycosylase NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 UDG UDG INTJ UH _ _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 gene gene PRON NN Number=Sing _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 human human ADJ JJ Degree=Pos _ _ _ _ 34 osteosarcoma osteosarcoma NOUN NN Number=Sing _ _ _ _ 35 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 36 Saos Saos PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 2 2 X LS _ _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 12741 # text = We demonstrate, through the deletion of the human UDG promoter sequences, that expression of E2F-1 activates the UDG promoter through several E2F sites. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 through through ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 deletion deletion NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 UDG Udg NOUN NN Number=Sing _ _ _ _ 11 promoter promoter NOUN NN Number=Sing _ _ _ _ 12 sequences sequence NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 15 expression expression NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 E2F E2F PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 1 1 NUM CD NumType=Card _ _ _ _ 20 activates activate NOUN NNS Number=Plur _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 UDG UDG PROPN NNP Number=Sing _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ _ 24 through through ADP IN _ _ _ _ _ 25 several several ADJ JJ Degree=Pos _ _ _ _ 26 E2F E2f NOUN NN Number=Sing _ _ _ _ 27 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 12742 # text = The major putative downstream site for E2F, located in the first exon, serves as a target for E2F-1/DP1 complex binding in vitro. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 major major ADJ JJ Degree=Pos _ _ _ _ 3 putative putative ADJ JJ Degree=Pos _ _ _ _ 4 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 5 site site NOUN NN Number=Sing _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 E2F E2F PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 13 exon exon NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 serves serve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 target target NOUN NN Number=Sing _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 E2F E2F PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 -1/DP1 -1/DP1 PROPN NNP Number=Sing _ _ _ _ 22 complex complex NOUN NN Number=Sing _ _ _ _ 23 binding bind VERB VBG VerbForm=Ger _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 12743 # text = We also provide evidence for the functional relationship between the cyclin-like UDG gene product and E2F. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 evidence evidence NOUN NN Number=Sing _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 functional functional ADJ JJ Degree=Pos _ _ _ _ 8 relationship relationship NOUN NN Number=Sing _ _ _ _ 9 between between ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 cyclin cyclin NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 like like ADJ JJ Degree=Pos _ _ _ _ 14 UDG Udg NOUN NN Number=Sing _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 product product NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 E2F E2f NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 12744 # text = High levels of UDG expression in a transient transfection assay result in the down-regulation of transcriptional activity through elements specific for E2F-mediated transcription. 1 High high ADJ JJ Degree=Pos _ _ _ _ 2 levels level NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 UDG UDG PROPN NNP Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 transient transient ADJ JJ Degree=Pos _ _ _ _ 9 transfection transfection NOUN NN Number=Sing _ _ _ _ 10 assay assay NOUN NN Number=Sing _ _ _ _ 11 result result NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 down down NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 regulation regulation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 19 activity activity NOUN NN Number=Sing _ _ _ _ 20 through through ADP IN _ _ _ _ _ 21 elements element NOUN NNS Number=Plur _ _ _ _ 22 specific specific ADJ JJ Degree=Pos _ _ _ _ 23 for for ADP IN _ _ _ _ _ 24 E2F E2F PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 12745 # text = Overexpression of UDG in Saos 2 cells was observed to delay growth late in G1 phase and transiently arrest these cells from progressing into the S phase. 1 Overexpression Overexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 UDG UDG PROPN NNP Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 Saos Saos PROPN NNP Number=Sing _ _ _ _ 6 2 2 NUM CD NumType=Card _ _ _ _ 7 cells cell NOUN NNS Number=Plur _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 delay delay VERB VB VerbForm=Inf _ _ _ _ 12 growth growth NOUN NN Number=Sing _ _ _ _ 13 late late ADV RB Degree=Pos _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 G1 G1 PROPN NNP Number=Sing _ _ _ _ 16 phase phase NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 transiently transiently ADV RB _ _ _ _ _ 19 arrest arrest ADV RBS Degree=Sup _ _ _ _ 20 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 from from SCONJ IN _ _ _ _ _ 23 progressing progress VERB VBG VerbForm=Ger _ _ _ _ 24 into into ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 S S PROPN NNP Number=Sing _ _ _ _ 27 phase phase NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 12746 # text = This hypothetical model integrates one mechanism of DNA repair with the cell cycle control of gene transcription, likely through E2F. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 hypothetical hypothetical ADJ JJ Degree=Pos _ _ _ _ 3 model model NOUN NN Number=Sing _ _ _ _ 4 integrates integrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 one one NUM CD NumType=Card _ _ _ _ 6 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 DNA dna NOUN NN Number=Sing _ _ _ _ 9 repair repair NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 cycle cycle NOUN NN Number=Sing _ _ _ _ 14 control control NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 gene gene NOUN NN Number=Sing _ _ _ _ 17 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 likely likely ADV RB _ _ _ _ _ 20 through through ADP IN _ _ _ _ _ 21 E2F E2F PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 12747 # text = This implicates E2F as a multifunctional target for proteins and enzymes, possibly, responsive to DNA damage through the negative effect of UDG on E2F-mediated transcriptional activity. 1 This this PRON DT Number=Sing|PronType=Dem _ _ _ _ 2 implicates implicate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 E2 E2 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 F F PROPN NNP Number=Sing _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 multifunctional multifunctional ADJ JJ Degree=Pos _ _ _ _ 8 target target NOUN NN Number=Sing _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 proteins protein NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 enzymes enzyme NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 possibly possibly ADV RB _ _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 responsive responsive ADJ JJ Degree=Pos _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 DNA dna NOUN NN Number=Sing _ _ _ _ 19 damage damage NOUN NN Number=Sing _ _ _ _ 20 through through ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 negative negative ADJ JJ Degree=Pos _ _ _ _ 23 effect effect NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 UDG UDG PROPN NNP Number=Sing _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 E2F E2F PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 31 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12748 # text = Document 0030013098 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013098 0030013098 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12749 # text = A novel T-cell trans-activator that recognizes a phorbol ester-inducible element of the interleukin-2 promoter. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 novel novel NOUN NN Number=Sing _ _ _ _ 3 T- T- PUNCT , _ _ _ _ SpaceAfter=No 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 - - PUNCT , _ _ _ _ SpaceAfter=No 7 activator activator NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 recognizes recognize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 11 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 12 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 15 element element NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 2 2 NUM CD NumType=Card _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12750 # text = The interleukin 2 (IL-2) gene promoter is recognized by several cell-type-specific and ubiquitous transcriptional regulators that integrate information transmitted by various signaling systems leading to IL-2 production and T-cell activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 3 2 2 NUM CD NumType=Card _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 promoter promoter NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 recognized recognize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 several several ADJ JJ Degree=Pos _ _ _ _ 15 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 type-specific type-specific ADJ JJ Degree=Pos _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 20 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 21 regulators regulator NOUN NNS Number=Plur _ _ _ _ 22 that that PRON WDT PronType=Rel _ _ _ _ 23 integrate integrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 24 information information NOUN NN Number=Sing _ _ _ _ 25 transmitted transmit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 various various ADJ JJ Degree=Pos _ _ _ _ 28 signaling signaling NOUN NN Number=Sing _ _ _ _ 29 systems system NOUN NNS Number=Plur _ _ _ _ 30 leading lead VERB VBG VerbForm=Ger _ _ _ _ 31 to to ADP IN _ _ _ _ _ 32 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 2 2 NUM CD NumType=Card _ _ _ _ 35 production production NOUN NN Number=Sing _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 cell cell NOUN NN Number=Sing _ _ _ _ 39 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 12751 # text = Using a combination of transfection, protein-DNA binding, and in vitro transcription methods, we have discovered the novel T-cell-specific transcriptional activator TCF-1 (for T-Cell Factor-1), which recognizes a T-cell-specific response element (TCE) located within the IL-2 promoter. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 combination combination NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 transfection transfection NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 DNA dna NOUN NN Number=Sing _ _ _ _ 10 binding binding VERB VBG VerbForm=Ger _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 methods method NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 19 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 discovered discover VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 novel novel NOUN NN Number=Sing _ _ _ _ 23 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 specific specific ADJ JJ Degree=Pos _ _ _ _ 27 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 28 activator activator NOUN NN Number=Sing _ _ _ _ 29 TCF TCF NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 for for ADP IN _ _ _ _ _ 34 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 Cell cell NOUN NN Number=Sing _ _ _ _ 36 Factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT , _ _ _ _ SpaceAfter=No 38 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 40 , , PUNCT , _ _ _ _ _ 41 which which PRON WDT PronType=Rel _ _ _ _ 42 recognizes recognize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 43 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 44 T-cell T-cell ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 specific specific ADJ JJ Degree=Pos _ _ _ _ 47 response response NOUN NN Number=Sing _ _ _ _ 48 element element NOUN NN Number=Sing _ _ _ _ 49 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 50 TCE TCE NOUN NN Number=Sing _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ _ 52 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 53 within within ADP IN _ _ _ _ _ 54 the the DET DT Definite=Def|PronType=Art _ _ _ _ 55 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 56 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 57 2 2 NUM CD NumType=Card _ _ _ _ 58 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 59 . . PUNCT . _ _ _ _ _ # sent_id = 12752 # text = Although the TCE is similar in sequence to a consensus NF kappa B site, several criteria indicate that TCF-1 is distinct from NF kappa B. 1 Although although SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 TCE Tce NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 similar similar ADJ JJ Degree=Pos _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 sequence sequence NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 consensus consensus NOUN NN Number=Sing _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ _ 12 kappa kappa PROPN NNP Number=Sing _ _ _ _ 13 B B PROPN NNP Number=Sing _ _ _ _ 14 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 several several ADJ JJ Degree=Pos _ _ _ _ 17 criteria criterion NOUN NNS Number=Plur _ _ _ _ 18 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 19 that that SCONJ IN _ _ _ _ _ 20 TCF TCF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - SYM SYM _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 25 from from ADP IN _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ _ 27 kappa kappa PROPN NNP Number=Sing _ _ _ _ 28 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 12753 # text = However, like NF kappa B, TCF-1 activity is induced by phorbol esters and other T-cell activators. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 like like ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ _ 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 TCF TCF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 activity activity NOUN NN Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 16 esters ester NOUN NNS Number=Plur _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 other other ADJ JJ Degree=Pos _ _ _ _ 19 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 activators activator NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12754 # text = Document 0030013109 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013109 0030013109 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12755 # text = Isolation of cDNA clones for 42 different Kruppel-related zinc finger proteins expressed in the human monoblast cell line U-937. 1 Isolation Isolation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 4 clones clone NOUN NNS Number=Plur _ _ _ _ 5 for for ADP IN _ _ _ _ _ 6 42 42 NUM CD NumType=Card _ _ _ _ 7 different different ADJ JJ Degree=Pos _ _ _ _ 8 Kruppel Kruppel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 related related ADJ JJ Degree=Pos _ _ _ _ 11 zinc zinc NOUN NN Number=Sing _ _ _ _ 12 finger finger NOUN NN Number=Sing _ _ _ _ 13 proteins protein NOUN NNS Number=Plur _ _ _ _ 14 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 monoblast monoblast NOUN NN Number=Sing _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ _ 20 line line NOUN NN Number=Sing _ _ _ _ 21 U- u- SYM SYM _ _ _ _ SpaceAfter=No 22 937 937 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12756 # text = To study the complexity and structural characteristics of zinc finger proteins expressed during human hematopoiesis and to isolate novel regulators of blood cell development, a degenerate oligonucleotide probe specific for a consensus zinc finger peptide domain was used to isolate 63 cDNA clones for Kruppel-related zinc finger genes from the human monoblast cell line U-937. 1 To to PART TO _ _ _ _ _ 2 study study VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 complexity complexity NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 structural structural ADJ JJ Degree=Pos _ _ _ _ 7 characteristics characteristic NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 zinc zinc NOUN NN Number=Sing _ _ _ _ 10 finger finger NOUN NN Number=Sing _ _ _ _ 11 proteins protein NOUN NNS Number=Plur _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 during during ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 hematopoiesis hematopoiesis NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 isolate isolate VERB VB VerbForm=Inf _ _ _ _ 19 novel novel NOUN NN Number=Sing _ _ _ _ 20 regulators regulator NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 blood blood NOUN NN Number=Sing _ _ _ _ 23 cell cell NOUN NN Number=Sing _ _ _ _ 24 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 degenerate degenerate NOUN NN Number=Sing _ _ _ _ 28 oligonucleotide oligonucleotide ADV RB _ _ _ _ _ 29 probe probe ADV RB _ _ _ _ _ 30 specific specific ADJ JJ Degree=Pos _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 33 consensus consensus NOUN NN Number=Sing _ _ _ _ 34 zinc zinc NOUN NN Number=Sing _ _ _ _ 35 finger finger NOUN NN Number=Sing _ _ _ _ 36 peptide peptide NOUN NN Number=Sing _ _ _ _ 37 domain domain NOUN NN Number=Sing _ _ _ _ 38 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 39 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 40 to to PART TO _ _ _ _ _ 41 isolate isolate VERB VB VerbForm=Inf _ _ _ _ 42 63 63 NUM CD NumType=Card _ _ _ _ 43 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 44 clones clone NOUN NNS Number=Plur _ _ _ _ 45 for for ADP IN _ _ _ _ _ 46 Kruppel Kruppel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 related related ADJ JJ Degree=Pos _ _ _ _ 49 zinc zinc NOUN NN Number=Sing _ _ _ _ 50 finger finger NOUN NN Number=Sing _ _ _ _ 51 genes gene NOUN NNS Number=Plur _ _ _ _ 52 from from ADP IN _ _ _ _ _ 53 the the DET DT Definite=Def|PronType=Art _ _ _ _ 54 human human ADJ JJ Degree=Pos _ _ _ _ 55 monoblast monoblast NOUN NN Number=Sing _ _ _ _ 56 cell cell NOUN NN Number=Sing _ _ _ _ 57 line line NOUN NN Number=Sing _ _ _ _ 58 U- u- SYM SYM _ _ _ _ SpaceAfter=No 59 937 937 NUM CD NumType=Card _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 12757 # text = By extensive nucleotide sequence and Northern blot analysis, these cDNA clones were found to originate from approximately 42 different genes (HZF 1-42) of which only 8 have previously been described. 1 By by ADP IN _ _ _ _ _ 2 extensive extensive ADJ JJ Degree=Pos _ _ _ _ 3 nucleotide nucleotide NOUN NN Number=Sing _ _ _ _ 4 sequence sequence NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 7 blot blot NOUN NN Number=Sing _ _ _ _ 8 analysis analysis NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 11 cDNA cDNa ADJ JJ Degree=Pos _ _ _ _ 12 clones clone NOUN NNS Number=Plur _ _ _ _ 13 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 originate originate VERB VB VerbForm=Inf _ _ _ _ 17 from from ADP IN _ _ _ _ _ 18 approximately approximately ADV RB _ _ _ _ _ 19 42 42 NUM CD NumType=Card _ _ _ _ 20 different different ADJ JJ Degree=Pos _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 HZF Hzf PROPN NNP Number=Sing _ _ _ _ 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 - - SYM SYM _ _ _ _ SpaceAfter=No 26 42 42 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 which which PRON WDT PronType=Rel _ _ _ _ 30 only only ADV RB _ _ _ _ _ 31 8 8 NUM CD NumType=Card _ _ _ _ 32 have have AUX VB VerbForm=Inf _ _ _ _ 33 previously previously ADV RB _ _ _ _ _ 34 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 35 described describe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ _ # sent_id = 12758 # text = Northern blot analysis showed that a majority of these genes were expressed at comparable levels in U-937 and HeLa cells. 1 Northern Northern ADJ JJ Degree=Pos _ _ _ _ 2 blot blot NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 majority majority NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 10 genes gene NOUN NNS Number=Plur _ _ _ _ 11 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 at at ADP IN _ _ _ _ _ 14 comparable comparable ADJ JJ Degree=Pos _ _ _ _ 15 levels level NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 937 937 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 HeLa Hela ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 12759 # text = The large number of individual genes represented among the 63 clones and their apparent non-cell-type-specific expression suggest that the majority of the Kruppel-related zinc finger genes are likely to be expressed in most human tissues. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 large large ADJ JJ Degree=Pos _ _ _ _ 3 number number NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 individual individual ADJ JJ Degree=Pos _ _ _ _ 6 genes gene NOUN NNS Number=Plur _ _ _ _ 7 represented represent VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 among among ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 63 63 NUM CD NumType=Card _ _ _ _ 11 clones clone NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 apparent apparent ADJ JJ Degree=Pos _ _ _ _ 15 non-cell non-cell ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 type-specific type-specific ADJ JJ Degree=Pos _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 suggest suggest VERB VB VerbForm=Inf _ _ _ _ 20 that that SCONJ IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 majority majority NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 Kruppel Kruppel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 related related ADJ JJ Degree=Pos _ _ _ _ 28 zinc zinc NOUN NN Number=Sing _ _ _ _ 29 finger finger NOUN NN Number=Sing _ _ _ _ 30 genes gene NOUN NNS Number=Plur _ _ _ _ 31 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 32 likely likely ADJ JJ Degree=Pos _ _ _ _ 33 to to PART TO _ _ _ _ _ 34 be be AUX VB VerbForm=Inf _ _ _ _ 35 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 most most ADJ JJS Degree=Sup _ _ _ _ 38 human human ADJ JJ Degree=Pos _ _ _ _ 39 tissues tissue NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 12760 # text = In contrast, some of the genes displayed a restricted expression pattern, indicating that they represent potential regulators of monocyte differentiation or proliferation. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 some some DET DT _ _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 genes gene NOUN NNS Number=Plur _ _ _ _ 8 displayed display VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 restricted restrict VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 pattern pattern NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 15 that that SCONJ IN _ _ _ _ _ 16 they they PRON PRP Case=Nom|Number=Plur|Person=3|PronType=Prs _ _ _ _ 17 represent represent VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 18 potential potential ADJ JJ Degree=Pos _ _ _ _ 19 regulators regulator NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 monocyte monocyte NOUN NN Number=Sing _ _ _ _ 22 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 12761 # text = Detailed structural analysis of the first 12 cDNAs (HZF 1-10) and a partial characterization of HZF 11-42 revealed that a common feature of human Kruppel-related zinc finger proteins is the presence of tandem arrays of zinc fingers ranging in number from 3 to over 20 that are preferentially located in the carboxy-terminal regions of the proteins. 1 Detailed detailed VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 structural structural ADJ JJ Degree=Pos _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 7 12 12 NUM CD NumType=Card _ _ _ _ 8 cDNAs cDNA NOUN NNS Number=Plur _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 HZF HZF PROPN NNP Number=Sing _ _ _ _ 11 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - SYM SYM _ _ _ _ SpaceAfter=No 13 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 partial partial ADJ JJ Degree=Pos _ _ _ _ 18 characterization characterization NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 HZF HZF PROPN NNP Number=Sing _ _ _ _ 21 11 11 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 - - SYM SYM _ _ _ _ SpaceAfter=No 23 42 42 NUM CD NumType=Card _ _ _ _ 24 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 that that SCONJ IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 common common ADJ JJ Degree=Pos _ _ _ _ 28 feature feature NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 Kruppel Kruppel PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 related related ADJ JJ Degree=Pos _ _ _ _ 34 zinc zinc NOUN NN Number=Sing _ _ _ _ 35 finger finger NOUN NN Number=Sing _ _ _ _ 36 proteins protein NOUN NNS Number=Plur _ _ _ _ 37 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 38 the the DET DT Definite=Def|PronType=Art _ _ _ _ 39 presence presence NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 tandem tandem NOUN NN Number=Sing _ _ _ _ 42 arrays array NOUN NNS Number=Plur _ _ _ _ 43 of of ADP IN _ _ _ _ _ 44 zinc zinc NOUN NN Number=Sing _ _ _ _ 45 fingers finger NOUN NNS Number=Plur _ _ _ _ 46 ranging rang VERB VBG VerbForm=Ger _ _ _ _ 47 in in ADP IN _ _ _ _ _ 48 number number NOUN NN Number=Sing _ _ _ _ 49 from from ADP IN _ _ _ _ _ 50 3 3 NUM CD NumType=Card _ _ _ _ 51 to to ADP IN _ _ _ _ _ 52 over over ADP IN _ _ _ _ _ 53 20 20 NUM CD NumType=Card _ _ _ _ 54 that that PRON WDT PronType=Rel _ _ _ _ 55 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 56 preferentially preferentially ADV RB _ _ _ _ _ 57 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 58 in in ADP IN _ _ _ _ _ 59 the the DET DT Definite=Def|PronType=Art _ _ _ _ 60 carboxy carboxy NOUN NN Number=Sing _ _ _ SpaceAfter=No 61 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 62 terminal terminal NOUN NN Number=Sing _ _ _ _ 63 regions region NOUN NNS Number=Plur _ _ _ _ 64 of of ADP IN _ _ _ _ _ 65 the the DET DT Definite=Def|PronType=Art _ _ _ _ 66 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 67 . . PUNCT . _ _ _ _ _ # sent_id = 12762 # text = In addition, several novel KRAB-containing zinc finger genes and a novel conserved sequence element were identified. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 several several ADJ JJ Degree=Pos _ _ _ _ 5 novel novel NOUN NN Number=Sing _ _ _ _ 6 KRAB krab NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 containing contain VERB VBG VerbForm=Ger _ _ _ _ 9 zinc zinc NOUN NN Number=Sing _ _ _ _ 10 finger finger NOUN NN Number=Sing _ _ _ _ 11 genes gene NOUN NNS Number=Plur _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 novel novel NOUN NN Number=Sing _ _ _ _ 15 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 sequence sequence NOUN NN Number=Sing _ _ _ _ 17 element element NOUN NN Number=Sing _ _ _ _ 18 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 identified identify VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12763 # text = Document 0030013110 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013110 0030013110 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12764 # text = Contribution of NF-kappa B and Sp1 binding motifs to the replicative capacity of human immunodeficiency virus type 1: distinct patterns of viral growth are determined by T-cell types. 1 Contribution contribution NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B b PROPN NNP Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 Sp1 sp1 PROPN NNP Number=Sing _ _ _ _ 9 binding bind VERB VBG VerbForm=Ger _ _ _ _ 10 motifs motif NOUN NNS Number=Plur _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 replicative replicative ADJ JJ Degree=Pos _ _ _ _ 14 capacity capacity NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 18 virus virus NOUN NN Number=Sing _ _ _ _ 19 type type NOUN NN Number=Sing _ _ _ _ 20 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 : : PUNCT : _ _ _ _ _ 22 distinct distinct ADJ JJ Degree=Pos _ _ _ _ 23 patterns pattern NOUN NNS Number=Plur _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 viral viral ADJ JJ Degree=Pos _ _ _ _ 26 growth growth NOUN NN Number=Sing _ _ _ _ 27 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 determined determine VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 by by ADP IN _ _ _ _ _ 30 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12765 # text = Starting with a replication-incompetent molecular clone of human immunodeficiency virus type 1, lacking all the NF-kappa B and Sp1 binding sites present in the native long terminal repeat (LTR), proviruses containing reconstructed LTRs with individual or combinations of NF-kappa B and Sp1 elements were generated and evaluated for their capacity to produce virus progeny following transfection-cocultivation. 1 Starting start VERB VBG VerbForm=Ger _ _ _ _ 2 with with ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 replication replication NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 incompetent incompetent NOUN NN Number=Sing _ _ _ _ 7 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 8 clone clone NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 human human ADJ JJ Degree=Pos _ _ _ _ 11 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 12 virus virus NOUN NN Number=Sing _ _ _ _ 13 type type NOUN NN Number=Sing _ _ _ _ 14 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 17 all all DET PDT _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 kappa kappa PROPN NNP Number=Sing _ _ _ _ 22 B b PROPN NNP Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 Sp1 sp1 PROPN NNP Number=Sing _ _ _ _ 25 binding bind VERB VBG VerbForm=Ger _ _ _ _ 26 sites site NOUN NNS Number=Plur _ _ _ _ 27 present present ADJ JJ Degree=Pos _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 native native ADJ JJ Degree=Pos _ _ _ _ 31 long long ADJ JJ Degree=Pos _ _ _ _ 32 terminal terminal NOUN NN Number=Sing _ _ _ _ 33 repeat repeat NOUN NN Number=Sing _ _ _ _ 34 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 35 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 proviruses proviruse NOUN NNS Number=Plur _ _ _ _ 39 containing contain VERB VBG VerbForm=Ger _ _ _ _ 40 reconstructed reconstruct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 41 LTRs LTR NOUN NNS Number=Plur _ _ _ _ 42 with with ADP IN _ _ _ _ _ 43 individual individual NOUN NN Number=Sing _ _ _ _ 44 or or CCONJ CC _ _ _ _ _ 45 combinations combination NOUN NNS Number=Plur _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 48 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 49 kappa kappa PROPN NNP Number=Sing _ _ _ _ 50 B b PROPN NNP Number=Sing _ _ _ _ 51 and and CCONJ CC _ _ _ _ _ 52 Sp1 sp1 NUM CD NumType=Card _ _ _ _ 53 elements element NOUN NNS Number=Plur _ _ _ _ 54 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 55 generated generate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 56 and and CCONJ CC _ _ _ _ _ 57 evaluated evaluate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 58 for for ADP IN _ _ _ _ _ 59 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 60 capacity capacity NOUN NN Number=Sing _ _ _ _ 61 to to PART TO _ _ _ _ _ 62 produce produce VERB VB VerbForm=Inf _ _ _ _ 63 virus virus NOUN NN Number=Sing _ _ _ _ 64 progeny progeny NOUN NN Number=Sing _ _ _ _ 65 following follow VERB VBG VerbForm=Ger _ _ _ _ 66 transfection transfection NOUN NN Number=Sing _ _ _ SpaceAfter=No 67 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 68 cocultivation cocultivation NOUN NN Number=Sing _ _ _ SpaceAfter=No 69 . . PUNCT . _ _ _ _ _ # sent_id = 12766 # text = Virus stocks obtained from these experiments exhibited a continuum of replicative capacities in different human T-cell types depending on which element(s) was present in the LTR. 1 Virus virus ADJ JJ Degree=Pos _ _ _ _ 2 stocks stock NOUN NNS Number=Plur _ _ _ _ 3 obtained obtain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 experiments experiment NOUN NNS Number=Plur _ _ _ _ 7 exhibited exhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 continuum continuum NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 replicative replicative ADJ JJ Degree=Pos _ _ _ _ 12 capacities capacitie NOUN NNS Number=Plur _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 different different ADJ JJ Degree=Pos _ _ _ _ 15 human human ADJ JJ Degree=Pos _ _ _ _ 16 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 types type NOUN NNS Number=Plur _ _ _ _ 19 depending depend VERB VBG VerbForm=Ger _ _ _ _ 20 on on ADP IN _ _ _ _ _ 21 which which DET WDT PronType=Int _ _ _ _ 22 element element NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 s s X AFX _ _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 27 present present ADJ JJ Degree=Pos _ _ _ _ 28 in in ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 LTR Ltr NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 12767 # text = For example, in experiments involving proviral clones with LTRs containing one or two NF-kappa B elements (and no Sp1 binding sites), a hierarchy of cellular permissivity to virus replication (peripheral blood lymphocytes = MT4 greater than H9 greater than CEM greater than Jurkat) was observed. 1 For for ADP IN _ _ _ _ _ 2 example example NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 experiments experiment NOUN NNS Number=Plur _ _ _ _ 6 involving involve VERB VBG VerbForm=Ger _ _ _ _ 7 proviral proviral ADJ JJ Degree=Pos _ _ _ _ 8 clones clone NOUN NNS Number=Plur _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 LTRs LTRs PROPN NNP Number=Sing _ _ _ _ 11 containing contain VERB VBG VerbForm=Ger _ _ _ _ 12 one one NUM CD NumType=Card _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 two two NUM CD NumType=Card _ _ _ _ 15 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa NOUN NN Number=Sing _ _ _ _ 18 B b NOUN NN Number=Sing _ _ _ _ 19 elements element NOUN NNS Number=Plur _ _ _ _ 20 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 21 and and CCONJ CC _ _ _ _ _ 22 no no DET DT _ _ _ _ _ 23 Sp1 sp1 NOUN NN Number=Sing _ _ _ _ 24 binding bind VERB VBG VerbForm=Ger _ _ _ _ 25 sites site NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 hierarchy hierarchy NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 32 permissivity permissivity NOUN NN Number=Sing _ _ _ _ 33 to to ADP IN _ _ _ _ _ 34 virus virus NOUN NN Number=Sing _ _ _ _ 35 replication replication NOUN NN Number=Sing _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 38 blood blood NOUN NN Number=Sing _ _ _ _ 39 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 40 = = PUNCT , _ _ _ _ _ 41 MT4 MT4 PROPN NNP Number=Sing _ _ _ _ 42 greater greater ADJ JJR Degree=Cmp _ _ _ _ 43 than than ADP IN _ _ _ _ _ 44 H9 H9 NUM CD NumType=Card _ _ _ _ 45 greater greater ADJ JJR Degree=Cmp _ _ _ _ 46 than than ADP IN _ _ _ _ _ 47 CEM CEM PROPN NNP Number=Sing _ _ _ _ 48 greater greater ADJ JJR Degree=Cmp _ _ _ _ 49 than than ADP IN _ _ _ _ _ 50 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ SpaceAfter=No 51 ) ) PUNCT -RRB- _ _ _ _ _ 52 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 53 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 54 . . PUNCT . _ _ _ _ _ # sent_id = 12768 # text = Of note was the associated emergence of second-site LTR revertants which involved an alteration of the TATA box. 1 Of of ADP IN _ _ _ _ _ 2 note note NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 associated associated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 emergence emergence NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 site site NOUN NN Number=Sing _ _ _ _ 11 LTR Ltr NOUN NN Number=Sing _ _ _ _ 12 revertants revertant NOUN NNS Number=Plur _ _ _ _ 13 which which PRON WDT PronType=Rel _ _ _ _ 14 involved involve VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 alteration alteration NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 TATA TATa NOUN NN Number=Sing _ _ _ _ 20 box box NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 12769 # text = These results suggest that the human immunodeficiency virus type 1 LTR possesses functional redundancy which ensures virus replication in different T-cell types and is capable of changing depending on the particular combination of transcriptional factors present. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 8 virus virus NOUN NN Number=Sing _ _ _ _ 9 type type NOUN NN Number=Sing _ _ _ _ 10 1 1 NUM CD NumType=Card _ _ _ _ 11 LTR Ltr NOUN NN Number=Sing _ _ _ _ 12 possesses possess NOUN NNS Number=Plur _ _ _ _ 13 functional functional ADJ JJ Degree=Pos _ _ _ _ 14 redundancy redundancy NOUN NN Number=Sing _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 ensures ensure VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 virus virus NOUN NN Number=Sing _ _ _ _ 18 replication replication NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 different different ADJ JJ Degree=Pos _ _ _ _ 21 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 types type NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 capable capable ADJ JJ Degree=Pos _ _ _ _ 27 of of SCONJ IN _ _ _ _ _ 28 changing change VERB VBG VerbForm=Ger _ _ _ _ 29 depending depend VERB VBG VerbForm=Ger _ _ _ _ 30 on on ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 particular particular ADJ JJ Degree=Pos _ _ _ _ 33 combination combination NOUN NN Number=Sing _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 36 factors factor NOUN NNS Number=Plur _ _ _ _ 37 present present ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12770 # text = Document 0030013115 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013115 0030013115 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12771 # text = Oxidant-regulation of gene expression in the chronically inflamed intestine. 1 Oxidant Oxidant ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 regulation regulation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 gene gene ADJ JJ Degree=Pos _ _ _ _ 6 expression expression NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 chronically chronically ADV RB _ _ _ _ _ 10 inflamed inflam VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 intestine intestine NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12772 # text = It is becoming increasingly apparent that the chronic gut inflammation observed in the idiopathic inflammatory bowel diseases (e.g. ulcerative colitis, Crohn's disease) is associated with enhanced production of leukocyte-derived oxidants. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 becoming become VERB VBG Tense=Pres|VerbForm=Part _ _ _ _ 4 increasingly increasingly ADV RB _ _ _ _ _ 5 apparent apparent ADJ JJ Degree=Pos _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 chronic chronic ADJ JJ Degree=Pos _ _ _ _ 9 gut gut NOUN NN Number=Sing _ _ _ _ 10 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 11 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 idiopathic idiopathic ADJ JJ Degree=Pos _ _ _ _ 15 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 16 bowel bowel NOUN NN Number=Sing _ _ _ _ 17 diseases disease NOUN NNS Number=Plur _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 e.g. e.g. X FW _ _ _ _ _ 20 ulcerative ulcerative ADJ JJ Degree=Pos _ _ _ _ 21 colitis colitis NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 , , PUNCT , _ _ _ _ _ 23 Crohn Crohn PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 's 's PART POS _ _ _ _ _ 25 disease disease NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 29 with with ADP IN _ _ _ _ _ 30 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 production production NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 leukocyte leukocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 oxidants oxidant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 12773 # text = Oxidants such as hydrogen peroxide are known to activate certain transcription factors such as nuclear transcription factor kappa beta. 1 Oxidants Oxidant NOUN NNS Number=Plur _ _ _ _ 2 such such ADJ JJ Degree=Pos _ _ _ _ 3 as as ADP IN _ _ _ _ _ 4 hydrogen hydrogen NUM CD NumType=Card _ _ _ _ 5 peroxide peroxide NOUN NN Number=Sing _ _ _ _ 6 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 activate activate VERB VB VerbForm=Inf _ _ _ _ 10 certain certain ADJ JJ Degree=Pos _ _ _ _ 11 transcription transcription NOUN NN Number=Sing _ _ _ _ 12 factors factor NOUN NNS Number=Plur _ _ _ _ 13 such such ADJ JJ Degree=Pos _ _ _ _ 14 as as ADP IN _ _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 factor factor NOUN NN Number=Sing _ _ _ _ 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 12774 # text = Nuclear transcription factor kB (NF-kappa B) is a ubiquitous transcription factor and pleiotropic regulator of numerous genes involved in the immune and inflammatory responses. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 kB kb PROPN NNP Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 ) ) PUNCT -RRB- _ _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 ubiquitous ubiquitous ADJ JJ Degree=Pos _ _ _ _ 14 transcription transcription NOUN NN Number=Sing _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 pleiotropic pleiotropic ADJ JJ Degree=Pos _ _ _ _ 18 regulator regulator NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 numerous numerous ADJ JJ Degree=Pos _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ _ 22 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 immune immune ADJ JJ Degree=Pos _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 28 responses response NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 12775 # text = This transcription factor is activated via the selective phosphorylation, ubiquination and degradation of its inhibitor protein I-kB thereby allowing translocation of NF-kappa B into the nucleus where it upregulates the transcription of a variety of adhesion molecules (e.g. ICAM-1, VCAM-1), cytokines (TNF, IL-1, IL-6) and enzymes (iNOS). 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 factor factor NOUN NN Number=Sing _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 via via ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 selective selective ADJ JJ Degree=Pos _ _ _ _ 9 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 ubiquination ubiquination NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 degradation degradation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 17 protein protein NOUN NN Number=Sing _ _ _ _ 18 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 kB kb PROPN NNP Number=Sing _ _ _ _ 21 thereby thereby ADV RB _ _ _ _ _ 22 allowing allow VERB VBG VerbForm=Ger _ _ _ _ 23 translocation translocation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa PROPN NNP Number=Sing _ _ _ _ 28 B b PROPN NNP Number=Sing _ _ _ _ 29 into into ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 32 where where ADV WRB PronType=Rel _ _ _ _ 33 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 34 upregulates upregulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 transcription transcription NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 39 variety variety NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 42 molecules molecule NOUN NNS Number=Plur _ _ _ _ 43 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 44 e.g. e.g. X FW _ _ _ _ _ 45 ICAM ICAm NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 VCAM VCAm NUM CD NumType=Card _ _ _ SpaceAfter=No 50 - - SYM SYM _ _ _ _ SpaceAfter=No 51 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 52 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 53 , , PUNCT , _ _ _ _ _ 54 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 55 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 56 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 57 , , PUNCT , _ _ _ _ _ 58 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 59 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 60 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 61 , , PUNCT , _ _ _ _ _ 62 IL IL ADV RB _ _ _ _ SpaceAfter=No 63 - - SYM SYM _ _ _ _ SpaceAfter=No 64 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 65 ) ) PUNCT -RRB- _ _ _ _ _ 66 and and CCONJ CC _ _ _ _ _ 67 enzymes enzyme NOUN NNS Number=Plur _ _ _ _ 68 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 69 iNOS ino NOUN NNS Number=Plur _ _ _ SpaceAfter=No 70 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 71 . . PUNCT . _ _ _ _ _ # sent_id = 12776 # text = The proteolytic degradation of the post-translationally modified I-kappa B is known to be mediated by the 26S proteasome complex. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 proteolytic proteolytic ADJ JJ Degree=Pos _ _ _ _ 3 degradation degradation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 post post X AFX _ _ _ _ SpaceAfter=No 7 -translationally -translationally ADV RB _ _ _ _ _ 8 modified modify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 to to PART TO _ _ _ _ _ 16 be be AUX VB VerbForm=Inf _ _ _ _ 17 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 by by ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 26 26 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 S s NOUN NN Number=Sing _ _ _ _ 22 proteasome proteasome DET DT _ _ _ _ _ 23 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 12777 # text = Based upon work from our laboratory, we propose that inhibition of NF-kappa B activation produces significant anti inflammatory activity which may be mediated by the inhibition of transcription of certain pro-inflammatory mediators and adhesion molecules. 1 Based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 upon upon ADP IN _ _ _ _ _ 3 work work NOUN NN Number=Sing _ _ _ _ 4 from from ADP IN _ _ _ _ _ 5 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 6 laboratory laboratory NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 9 propose propose VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 11 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 produces produce NOUN NNS Number=Plur _ _ _ _ 19 significant significant ADJ JJ Degree=Pos _ _ _ _ 20 anti anti X AFX _ _ _ _ _ 21 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 22 activity activity NOUN NN Number=Sing _ _ _ _ 23 which which PRON WDT PronType=Rel _ _ _ _ 24 may may AUX MD VerbForm=Fin _ _ _ _ 25 be be AUX VB VerbForm=Inf _ _ _ _ 26 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 by by ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 certain certain ADJ JJ Degree=Pos _ _ _ _ 34 pro-inflammatory pro-inflammatory ADJ JJ Degree=Pos _ _ _ _ 35 mediators mediator NOUN NNS Number=Plur _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 adhesion adhesion NOUN NN Number=Sing _ _ _ _ 38 molecules molecule NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12778 # text = Document 0030013119 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013119 0030013119 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12779 # text = Coexpression of the interleukin-13 and interleukin-4 genes correlates with their physical linkage in the cytokine gene cluster on human chromosome 5q23-31. 1 Coexpression Coexpression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 13 13 NUM CD NumType=Card _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 4 4 NUM CD NumType=Card _ _ _ _ 11 genes gene NOUN NNS Number=Plur _ _ _ _ 12 correlates correlate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 15 physical physical ADJ JJ Degree=Pos _ _ _ _ 16 linkage linkage NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 cluster cluster NOUN NN Number=Sing _ _ _ _ 22 on on ADP IN _ _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 25 5q23 5q23 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 - - SYM SYM _ _ _ _ SpaceAfter=No 27 31 31 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12780 # text = Interleukin-13 (IL-13) and IL-4 are cytokines produced by T cells that are encoded by the q23-31 region of human chromosome 5. 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -13 -13 NUM CD NumType=Card _ _ _ _ 3 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 4 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 13 13 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 4 4 NUM CD NumType=Card _ _ _ _ 12 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 13 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 14 produced produce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 that that PRON WDT PronType=Rel _ _ _ _ 19 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 encoded encod VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 q23 q23 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 -31 -31 NUM CD NumType=Card _ _ _ _ 25 region region NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 human human ADJ JJ Degree=Pos _ _ _ _ 28 chromosome chromosome NOUN NN Number=Sing _ _ _ _ 29 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 12781 # text = To investigate the regulation of IL-13 gene expression by T cells, we isolated and sequenced the human IL-13 gene, analyzed its 5'-flanking region for potential transcriptional activation elements, and examined its expression in nontransformed T-lineage cell populations. 1 To to PART TO _ _ _ _ _ 2 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 regulation regulation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 13 13 NUM CD NumType=Card _ _ _ _ 9 gene gene NOUN NN Number=Sing _ _ _ _ 10 expression expression NOUN NN Number=Sing _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 16 isolated isolate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 sequenced sequence VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 13 13 NUM CD NumType=Card _ _ _ _ 24 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 analyzed analyze VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ SpaceAfter=No 28 s be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 29 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 ' ' PUNCT '' _ _ _ _ SpaceAfter=No 31 - - PUNCT , _ _ _ _ SpaceAfter=No 32 flanking flank VERB VBG VerbForm=Ger _ _ _ _ 33 region region NOUN NN Number=Sing _ _ _ _ 34 for for ADP IN _ _ _ _ _ 35 potential potential ADJ JJ Degree=Pos _ _ _ _ 36 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 37 activation activation NOUN NN Number=Sing _ _ _ _ 38 elements element NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 and and CCONJ CC _ _ _ _ _ 41 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 42 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 43 expression expression NOUN NN Number=Sing _ _ _ _ 44 in in ADP IN _ _ _ _ _ 45 nontransformed nontransform ADJ JJ Degree=Pos _ _ _ _ 46 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 lineage lineage NOUN NN Number=Sing _ _ _ _ 48 cell cell NOUN NN Number=Sing _ _ _ _ 49 populations population NOUN NNS Number=Plur _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 12782 # text = The human IL-13 gene was located 12.5-kb upstream of the IL-4 gene and 2-kb downstream of a CpG island. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 human human ADJ JJ Degree=Pos _ _ _ _ 3 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 13 13 NUM CD NumType=Card _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 8 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 12.5 12.5 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kb kb NOUN NN Number=Sing _ _ _ _ 12 upstream upstream NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 4 4 NUM CD NumType=Card _ _ _ _ 18 gene gene NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 kb kb NOUN NN Number=Sing _ _ _ _ 23 downstream downstream NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 CpG CpG PROPN NNP Number=Sing _ _ _ _ 27 island island NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 12783 # text = The IL-13 gene 5' flank region included a segment with sequence homology to P elements of the IL-4 promoter involved in transcriptional activation in T cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 13 13 NUM CD NumType=Card _ _ _ _ 5 gene gene NOUN NN Number=Sing _ _ _ _ 6 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 ' ' PUNCT `` _ _ _ _ _ 8 flank flank NOUN NN Number=Sing _ _ _ _ 9 region region NOUN NN Number=Sing _ _ _ _ 10 included include VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 segment segment NOUN NN Number=Sing _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 sequence sequence NOUN NN Number=Sing _ _ _ _ 15 homology homology NOUN NN Number=Sing _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 P p NOUN NN Number=Sing _ _ _ _ 18 elements element NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 4 4 NUM CD NumType=Card _ _ _ _ 24 promoter promoter NOUN NN Number=Sing _ _ _ _ 25 involved involved ADJ JJ Degree=Pos _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 28 activation activation NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 T t PROPN NNP Number=Sing _ _ _ _ 31 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 12784 # text = Mutation of the IL-13 1 Mutation Mutation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 -13 -13 NUM CD NumType=Card _ _ _ _ # sent_id = 12785 # text = P element site significantly reduced IL-13 promoter activity in response to T-cell activation. 1 P p SYM NFP _ _ _ _ _ 2 element element NOUN NN Number=Sing _ _ _ _ 3 site site NOUN NN Number=Sing _ _ _ _ 4 significantly significantly ADV RB _ _ _ _ _ 5 reduced reduce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 13 13 NUM CD NumType=Card _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 response response NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 cell cell NOUN NN Number=Sing _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 12786 # text = Oligonucleotides containing the IL-13 or IL-4 P element sites specifically bound the transcriptional activator protein, nuclear factor-activated T cells, preformed (NF-ATp), when incubated with nuclear protein extracts from activated T cells. 1 Oligonucleotides Oligonucleotides SCONJ IN _ _ _ _ _ 2 containing contain VERB VBG VerbForm=Ger _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 13 13 NUM CD NumType=Card _ _ _ _ 7 or or CCONJ CC _ _ _ _ _ 8 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 4 4 NUM CD NumType=Card _ _ _ _ 11 P p NOUN NN Number=Sing _ _ _ _ 12 element element NOUN NN Number=Sing _ _ _ _ 13 sites site NOUN NNS Number=Plur _ _ _ _ 14 specifically specifically ADV RB _ _ _ _ _ 15 bound bound ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 activator activator NOUN NN Number=Sing _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 22 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 -activated -activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 T t PROPN NNP Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 preformed preform VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 ATp ATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 when when ADV WRB PronType=Int _ _ _ _ 35 incubated incubate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 36 with with ADP IN _ _ _ _ _ 37 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 38 protein protein NOUN NN Number=Sing _ _ _ _ 39 extracts extract NOUN NNS Number=Plur _ _ _ _ 40 from from ADP IN _ _ _ _ _ 41 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 42 T t PROPN NNP Number=Sing _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 44 . . PUNCT . _ _ _ _ _ # sent_id = 12787 # text = Similar to IL-4, IL-13 mRNA expression was highest in T-cell populations enriched for cells that had previously been primed in vivo or in vitro, indicating that priming increases the expression of the IL-13 and IL-4 genes in a coordinate manner. 1 Similar similar ADJ JJ Degree=Pos _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 13 13 NUM CD NumType=Card _ _ _ _ 10 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 highest highest ADJ JJS Degree=Sup _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 populations population NOUN NNS Number=Plur _ _ _ _ 18 enriched enrich VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 that that PRON WDT PronType=Rel _ _ _ _ 22 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 23 previously previously ADV RB _ _ _ _ _ 24 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 25 primed prim VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 vivo vivo NOUN NN Number=Sing _ _ _ _ 28 or or CCONJ CC _ _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 indicating indicate VERB VBG VerbForm=Ger _ _ _ _ 33 that that SCONJ IN _ _ _ _ _ 34 priming prim VERB VBG VerbForm=Ger _ _ _ _ 35 increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 expression expression NOUN NN Number=Sing _ _ _ _ 38 of of ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 13 13 NUM CD NumType=Card _ _ _ _ 43 and and CCONJ CC _ _ _ _ _ 44 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 46 4 4 NUM CD NumType=Card _ _ _ _ 47 genes gene NOUN NNS Number=Plur _ _ _ _ 48 in in ADP IN _ _ _ _ _ 49 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 50 coordinate coordinate ADJ JJ Degree=Pos _ _ _ _ 51 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 . . PUNCT . _ _ _ _ _ # sent_id = 12788 # text = Because the primed T cells contain higher levels of nuclear NF-ATp, capable of binding to P elements of the IL-4 and IL-13 promoters, than do freshly-isolated T cells, the NF-AT-binding P elements are attractive candidates to mediate the coordinate expression of these two cytokine genes. 1 Because because SCONJ IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 primed prim ADJ JJ Degree=Pos _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 contain contain VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 higher higher ADJ JJR Degree=Cmp _ _ _ _ 8 levels level NOUN NNS Number=Plur _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 ATp ATp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 capable capable ADJ JJ Degree=Pos _ _ _ _ 16 of of SCONJ IN _ _ _ _ _ 17 binding bind VERB VBG VerbForm=Ger _ _ _ _ 18 to to ADP IN _ _ _ _ _ 19 P p PROPN NNP Number=Sing _ _ _ _ 20 elements element NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - SYM SYM _ _ _ _ SpaceAfter=No 25 4 4 NUM CD NumType=Card _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 13 13 NUM CD NumType=Card _ _ _ _ 30 promoters promoter NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 than than SCONJ IN _ _ _ _ _ 33 do do AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 34 freshly freshly ADV RB _ _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 T t PROPN NNP Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 39 , , PUNCT , _ _ _ _ _ 40 the the DET DT Definite=Def|PronType=Art _ _ _ _ 41 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 AT AT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 binding binding VERB VBG VerbForm=Ger _ _ _ _ 46 P p NOUN NN Number=Sing _ _ _ _ 47 elements element NOUN NNS Number=Plur _ _ _ _ 48 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 49 attractive attractive ADJ JJ Degree=Pos _ _ _ _ 50 candidates candidate NOUN NNS Number=Plur _ _ _ _ 51 to to PART TO _ _ _ _ _ 52 mediate mediate VERB VB VerbForm=Inf _ _ _ _ 53 the the DET DT Definite=Def|PronType=Art _ _ _ _ 54 coordinate coordinate ADJ JJ Degree=Pos _ _ _ _ 55 expression expression NOUN NN Number=Sing _ _ _ _ 56 of of ADP IN _ _ _ _ _ 57 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 58 two two NUM CD NumType=Card _ _ _ _ 59 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 60 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 61 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12789 # text = Document 0030013122 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013122 0030013122 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12790 # text = Gene transcription through activation of G-protein-coupled chemoattractant receptors. 1 Gene gene PROPN NNP Number=Sing _ _ _ _ 2 transcription transcription NOUN NN Number=Sing _ _ _ _ 3 through through ADP IN _ _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 G- G- NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 protein- protein- PUNCT : _ _ _ _ SpaceAfter=No 8 coupled couple VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 chemoattractant chemoattractant ADJ JJ Degree=Pos _ _ _ _ 10 receptors receptor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12791 # text = Receptors for leukocyte chemoattractants, including chemokines, are traditionally considered to be responsible for the activation of special leukocyte functions such as chemotaxis, degranulation, and the release of superoxide anions. 1 Receptors Receptor NOUN NNS Number=Plur _ _ _ _ 2 for for ADP IN _ _ _ _ _ 3 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 4 chemoattractants chemoattractant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 including include VERB VBG VerbForm=Ger _ _ _ _ 7 chemokines chemokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 traditionally traditionally ADV RB _ _ _ _ _ 11 considered consider VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 to to PART TO _ _ _ _ _ 13 be be AUX VB VerbForm=Inf _ _ _ _ 14 responsible responsible ADJ JJ Degree=Pos _ _ _ _ 15 for for ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 special special ADJ JJ Degree=Pos _ _ _ _ 20 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 21 functions function NOUN NNS Number=Plur _ _ _ _ 22 such such ADJ JJ Degree=Pos _ _ _ _ 23 as as ADP IN _ _ _ _ _ 24 chemotaxis chemotaxis NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 degranulation degranulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 release release NOUN NN Number=Sing _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 superoxide superoxide ADJ JJ Degree=Pos _ _ _ _ 33 anions anion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 12792 # text = Recently, these G-protein-coupled serpentine receptors have been found to transduce signals leading to gene transcription and translation in leukocytes. 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 4 G-protein-coupled G-protein-coupled ADJ JJ Degree=Pos _ _ _ _ 5 serpentine serpentine NOUN NN Number=Sing _ _ _ _ 6 receptors receptor NOUN NNS Number=Plur _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 9 found find VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 transduce transduce VERB VB VerbForm=Inf _ _ _ _ 12 signals signal NOUN NNS Number=Plur _ _ _ _ 13 leading lead VERB VBG VerbForm=Ger _ _ _ _ 14 to to PART TO _ _ _ _ _ 15 gene gene VERB VB VerbForm=Inf _ _ _ _ 16 transcription transcription NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 translation translation NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 leukocytes leukocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 12793 # text = Transcription factors, such as NF kappa B and AP-1, are activated upon stimulation of the cells with several chemoattractants at physiologically relevant concentrations. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 such such ADJ JJ Degree=Pos _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ _ 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B B PROPN NNP Number=Sing _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 15 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 upon upon ADP IN _ _ _ _ _ 17 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 with with ADP IN _ _ _ _ _ 22 several several ADJ JJ Degree=Pos _ _ _ _ 23 chemoattractants chemoattractant NOUN NNS Number=Plur _ _ _ _ 24 at at ADP IN _ _ _ _ _ 25 physiologically physiologically ADV RB _ _ _ _ _ 26 relevant relevant ADJ JJ Degree=Pos _ _ _ _ 27 concentrations concentration NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 12794 # text = Activation of transcription factors through these receptors involves G-protein coupling and the activation of protein kinases. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 factors factor NOUN NNS Number=Plur _ _ _ _ 5 through through ADP IN _ _ _ _ _ 6 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 7 receptors receptor NOUN NNS Number=Plur _ _ _ _ 8 involves involf NOUN NNS Number=Plur _ _ _ _ 9 G- G- PUNCT : _ _ _ _ SpaceAfter=No 10 protein protein NOUN NN Number=Sing _ _ _ _ 11 coupling coupling NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 activation activation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 kinases kinase NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 12795 # text = The underlying signaling pathways appear to be different from those utilized by TNF-alpha, a better characterized cytokine that induces the transcription of immediate-early genes. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 underlying underlying ADJ JJ Degree=Pos _ _ _ _ 3 signaling signaling NOUN NN Number=Sing _ _ _ _ 4 pathways pathway NOUN NNS Number=Plur _ _ _ _ 5 appear appear VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 be be AUX VB VerbForm=Inf _ _ _ _ 8 different different ADJ JJ Degree=Pos _ _ _ _ 9 from from ADP IN _ _ _ _ _ 10 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 11 utilized utilize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 TNF TNF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 better better ADJ JJR Degree=Cmp _ _ _ _ 19 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 21 that that PRON WDT PronType=Rel _ _ _ _ 22 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 transcription transcription NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 immediate immediate ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 early early ADJ JJ Degree=Pos _ _ _ _ 29 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 12796 # text = Chemoattractants stimulate the expression of several inflammatory cytokines and chemokines, which in turn may activate their respective receptors and initiate an autocrine regulatory mechanism for persistent cytokine and chemokine gene expression. 1 Chemoattractants Chemoattractant NOUN NNS Number=Plur _ _ _ _ 2 stimulate stimulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 expression expression NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 several several ADJ JJ Degree=Pos _ _ _ _ 7 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 8 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 9 and and CCONJ CC _ _ _ _ _ 10 chemokines chemokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 which which PRON WDT PronType=Rel _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 turn turn NOUN NN Number=Sing _ _ _ _ 15 may may AUX MD VerbForm=Fin _ _ _ _ 16 activate activate VERB VB VerbForm=Inf _ _ _ _ 17 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 18 respective respective ADJ JJ Degree=Pos _ _ _ _ 19 receptors receptor NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 initiate initiate VERB VB VerbForm=Inf _ _ _ _ 22 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 autocrine autocrine ADJ JJ Degree=Pos _ _ _ _ 24 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 25 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 26 for for ADP IN _ _ _ _ _ 27 persistent persistent ADJ JJ Degree=Pos _ _ _ _ 28 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 chemokine chemokine NOUN NN Number=Sing _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12797 # text = Document 0030013123 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013123 0030013123 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12798 # text = AML and Ets proteins regulate the I alpha1 germ-line promoter. 1 AML AML PROPN NNP Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 Ets ets PROPN NNPS Number=Plur _ _ _ _ 4 proteins protein NOUN NNS Number=Plur _ _ _ _ 5 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 8 alpha1 alpha1 NUM CD NumType=Card _ _ _ _ 9 germ germ NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 line line NOUN NN Number=Sing _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12799 # text = The immunoglobulin heavy chain (IgH) class switch recombination of B lymphocytes preferentially targets unrearranged IgH genes that have already been rendered transcriptionally active. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 3 heavy heavy ADJ JJ Degree=Pos _ _ _ _ 4 chain chain NOUN NN Number=Sing _ _ _ _ 5 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 6 IgH IgH PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 ) ) PUNCT -RRB- _ _ _ _ _ 8 class class NOUN NN Number=Sing _ _ _ _ 9 switch switch NOUN NN Number=Sing _ _ _ _ 10 recombination recombination NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 B b ADJ JJ Degree=Pos _ _ _ _ 13 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 14 preferentially preferentially ADV RB _ _ _ _ _ 15 targets target VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 unrearranged unrearrang ADJ JJ Degree=Pos _ _ _ _ 17 IgH Igh ADJ JJ Degree=Pos _ _ _ _ 18 genes gene NOUN NNS Number=Plur _ _ _ _ 19 that that PRON WDT PronType=Rel _ _ _ _ 20 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 already already ADV RB _ _ _ _ _ 22 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 23 rendered render VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 transcriptionally transcriptionally ADV RB _ _ _ _ _ 25 active active ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 12800 # text = Transcription of the germ-line IgH genes is controlled by intervening (I) regions upstream of their switch regions. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 germ germ NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 line line NOUN NN Number=Sing _ _ _ _ 7 IgH Igh NOUN NN Number=Sing _ _ _ _ 8 genes gene NOUN NNS Number=Plur _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by SCONJ IN _ _ _ _ _ 12 intervening intervene VERB VBG VerbForm=Ger _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ _ 16 regions region NOUN NNS Number=Plur _ _ _ _ 17 upstream upstream ADJ JJ Degree=Pos _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 20 switch switch NOUN NN Number=Sing _ _ _ _ 21 regions region NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 12801 # text = The I alpha1 promoter activates transcription of the human germ-line C alpha1 gene for IgA1 and mediates the transforming growth factor (TGF)-beta1 responsiveness of this locus. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 3 alpha1 alpha1 X GW _ _ _ _ _ 4 promoter promoter X GW _ _ _ _ _ 5 activates activate X GW _ _ _ _ _ 6 transcription transcription NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 germ germ NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 line line NOUN NN Number=Sing _ _ _ _ 13 C c NOUN NN Number=Sing _ _ _ _ 14 alpha1 alpha1 NUM CD NumType=Card _ _ _ _ 15 gene gene NOUN NN Number=Sing _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 IgA1 IgA1 NUM CD NumType=Card _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 mediates mediate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 transforming transform VERB VBG VerbForm=Ger _ _ _ _ 22 growth growth NOUN NN Number=Sing _ _ _ _ 23 factor factor NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 TGF TGF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 27 - - SYM SYM _ _ _ _ SpaceAfter=No 28 beta1 beta1 NUM CD NumType=Card _ _ _ _ 29 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 32 locus locus NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 12802 # text = Here we show that the I alpha1 promoter contains several binding sites for the AML/PEBP2/CBF family of transcription factors and that AML and Ets proteins are major regulators of the basal and TGF-beta-inducible promoter activity. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 alpha1 alpha1 NUM CD NumType=Card _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 several several ADJ JJ Degree=Pos _ _ _ _ 11 binding binding VERB VBG VerbForm=Ger _ _ _ _ 12 sites site NOUN NNS Number=Plur _ _ _ _ 13 for for ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 AML/PEBP2/ Aml/pebp2/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 CBF CBF NOUN NN Number=Sing _ _ _ _ 17 family family NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 transcription transcription NOUN NN Number=Sing _ _ _ _ 20 factors factor NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 that that SCONJ IN _ _ _ _ _ 23 AML aml PROPN NNP Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 Ets et PROPN NNP Number=Sing _ _ _ _ 26 proteins protein NOUN NNS Number=Plur _ _ _ _ 27 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 28 major major ADJ JJ Degree=Pos _ _ _ _ 29 regulators regulator NOUN NNS Number=Plur _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 basal basal NOUN NN Number=Sing _ _ _ _ 33 and and CCONJ CC _ _ _ _ _ 34 TGF-beta TGF-beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 37 promoter promoter NOUN NN Number=Sing _ _ _ _ 38 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 12803 # text = Our data constitute a starting point for studies to elucidate the molecular mechanism by which TGF-beta regulates IgA production. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 constitute constitute VERB VB VerbForm=Inf _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 starting starting VERB VBG VerbForm=Ger _ _ _ _ 6 point point NOUN NN Number=Sing _ _ _ _ 7 for for ADP IN _ _ _ _ _ 8 studies study NOUN NNS Number=Plur _ _ _ _ 9 to to PART TO _ _ _ _ _ 10 elucidate elucidate VERB VB VerbForm=Inf _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 13 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 which which PRON WDT PronType=Rel _ _ _ _ 16 TGF Tgf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 beta beta NOUN NN Number=Sing _ _ _ _ 19 regulates regulate NOUN NNS Number=Plur _ _ _ _ 20 IgA Iga ADP IN _ _ _ _ _ 21 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12804 # text = Document 0030013130 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013130 0030013130 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12805 # text = CD30 is a CD40-inducible molecule that negatively regulates CD40-mediated immunoglobulin class switching in non-antigen-selected human B cells. 1 CD30 CD30 PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 CD40 CD40 NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 7 molecule molecule NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 negatively negatively ADV RB _ _ _ _ _ 10 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 -mediated -mediated VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 14 class class NOUN NN Number=Sing _ _ _ _ 15 switching switch VERB VBG VerbForm=Ger _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 non-antigen non-antigen ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 18 -selected -select VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12806 # text = We used our monoclonal model of germinal center maturation, CL-01 B cells, to investigate the role of CD30 in human B cell differentiation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 4 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 5 model model NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 germinal germinal ADJ JJ Degree=Pos _ _ _ _ 8 center center NOUN NN Number=Sing _ _ _ _ 9 maturation maturation NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 CL CL NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 01 01 NUM CD NumType=Card _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 investigate investigate VERB VB VerbForm=Inf _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 role role NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 CD30 CD30 PROPN NNP Number=Sing _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 B b NOUN NN Number=Sing _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 12807 # text = CL-01 cells are IgM+ IgD+ 1 CL Cl INTJ UH _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 01 01 NUM CD NumType=Card _ _ _ _ 4 cells cell NOUN NNS Number=Plur _ _ _ _ 5 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 IgM IgM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 + + SYM SYM _ _ _ _ _ 8 IgD IgD PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 + + SYM NFP _ _ _ _ _ # sent_id = 12808 # text = CD30+ and switch to IgG, IgA, and IgE when exposed to CD40L and IL-4. 1 CD30 CD30 NUM CD NumType=Card _ _ _ SpaceAfter=No 2 + + SYM SYM _ _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 switch switch NOUN NN Number=Sing _ _ _ _ 5 to to ADP IN _ _ _ _ _ 6 IgG IgG PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 IgA IgA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 IgE IgE PROPN NNP Number=Sing _ _ _ _ 12 when when ADV WRB PronType=Int _ _ _ _ 13 exposed expose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 CD40L CD40L PROPN NNP Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - SYM SYM _ _ _ _ SpaceAfter=No 19 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 12809 # text = Switching is hampered by CD30 coengagement, possibly through interference with the CD40-mediated NF-kappaB-dependent transcriptional activation of downstream C(H) genes. 1 Switching switching NOUN NN Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 hampered hamper VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 CD30 CD30 NUM CD NumType=Card _ _ _ _ 6 coengagement coengagement NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 possibly possibly ADV RB _ _ _ _ _ 9 through through ADP IN _ _ _ _ _ 10 interference interference NOUN NN Number=Sing _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 CD40 CD40 NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 21 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 22 activation activation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 25 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 H H PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 12810 # text = The physiological relevance of this phenomenon is emphasized by similar CD30-mediated effects in naive B cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 physiological physiological ADJ JJ Degree=Pos _ _ _ _ 3 relevance relevance NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 6 phenomenon phenomenon NOUN NN Number=Sing _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 emphasized emphasize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 similar similar ADJ JJ Degree=Pos _ _ _ _ 11 CD30 CD30 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 effects effect NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 naive naive ADJ JJ Degree=Pos _ _ _ _ 17 B b ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 12811 # text = Expression of CD30 by these cells is induced by CD40L but is inhibited by B cell receptor coengagement and/or exposure to IL-6 and IL-12. 1 Expression expression NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 CD30 CD30 NUM CD NumType=Card _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 CD40L CD40L NOUN NN Number=Sing _ _ _ _ 11 but but CCONJ CC _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ _ 18 coengagement coengagement NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 or or CCONJ CC _ _ _ _ _ 22 exposure exposure NOUN NN Number=Sing _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 6 6 NUM CD NumType=Card _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 IL il NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 12812 # text = Our data suggest that CD30 critically regulates the CD40-mediated differentiation of non-antigen-selected human B cells. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 CD30 CD30 PROPN NNP Number=Sing _ _ _ _ 6 critically critically ADV RB _ _ _ _ _ 7 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 CD40 CD40 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 non-antigen non-antigen ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 -selected -select VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 human human ADJ JJ Degree=Pos _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12813 # text = Document 0030013134 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013134 0030013134 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12814 # text = Regulation of NF-kappa B activity by I kappa B alpha and I kappa B beta stability. 1 Regulation regulation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B b ADJ JJ Degree=Pos _ _ _ _ 7 activity activity NOUN NN Number=Sing _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 kappa kappa PROPN NNP Number=Sing _ _ _ _ 11 B B PROPN NNP Number=Sing _ _ _ _ 12 alpha alpha PROPN NNP Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 15 kappa kappa X FW Foreign=Yes _ _ _ _ 16 B b ADJ JJ Degree=Pos _ _ _ _ 17 beta beta NOUN NN Number=Sing _ _ _ _ 18 stability stability NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12815 # text = Transcription factor NF-kappa B must be released from cytoplasmic inhibitory molecules (I kappa 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ _ 3 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 must must AUX MD VerbForm=Fin _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 released release VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 cytoplasmic cytoplasmic ADJ JJ Degree=Pos _ _ _ _ 12 inhibitory inhibitory NOUN NN Number=Sing _ _ _ _ 13 molecules molecule NOUN NNS Number=Plur _ _ _ _ 14 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 kappa kappa NOUN NN Number=Sing _ _ _ _ # sent_id = 12816 # text = Bs) in order to move to the nucleus and to activate its target genes. 1 Bs bs NOUN NNS Number=Plur _ _ _ SpaceAfter=No 2 ) ) PUNCT -RRB- _ _ _ _ _ 3 in in ADP IN _ _ _ _ _ 4 order order NOUN NN Number=Sing _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 move move VERB VB VerbForm=Inf _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 activate activate VERB VB VerbForm=Inf _ _ _ _ 13 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 14 target target NOUN NN Number=Sing _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 12817 # text = Little is known about the mechanisms regulating the maintenance of constitutive nuclear NF-kappa B in some cell-types and of sustained nuclear NF-kappa B activity after stimulation. 1 Little little PROPN NNP Number=Sing _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 known know VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 4 about about ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 mechanisms mechanism NOUN NNS Number=Plur _ _ _ _ 7 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 maintenance maintenance NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 12 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 13 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 some some DET DT _ _ _ _ _ 19 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 types type NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 sustained sustain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 26 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 activity activity NOUN NN Number=Sing _ _ _ _ 31 after after ADP IN _ _ _ _ _ 32 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 12818 # text = Increased turnover has been implicated in the regulation of constitutive NF-kappa B activity in mature B cells. 1 Increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 turnover turnover NOUN NN Number=Sing _ _ _ _ 3 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 5 implicated implicate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 regulation regulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 11 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 mature mature ADJ JJ Degree=Pos _ _ _ _ 18 B b ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 12819 # text = We therefore compared the turnover of I kappa B alpha and I kappa B beta in mature B cells and HeLa cells. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 therefore therefore ADV RB _ _ _ _ _ 3 compared compare VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 turnover turnover NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B B PROPN NNP Number=Sing _ _ _ _ 10 alpha alpha PROPN NNP Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 13 kappa kappa X FW Foreign=Yes _ _ _ _ 14 B b ADJ JJ Degree=Pos _ _ _ _ 15 beta beta NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 mature mature ADJ JJ Degree=Pos _ _ _ _ 18 B b ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 HeLa Hela ADJ JJ Degree=Pos _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 12820 # text = Both proteins display a high turnover in B cells although I kappa B beta is considerably more stable than I kappa B alpha. 1 Both both DET DT _ _ _ _ _ 2 proteins protein NOUN NNS Number=Plur _ _ _ _ 3 display display VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 high high ADJ JJ Degree=Pos _ _ _ _ 6 turnover turnover NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 B b ADJ JJ Degree=Pos _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 although although SCONJ IN _ _ _ _ _ 11 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 12 kappa kappa PROPN NNP Number=Sing _ _ _ _ 13 B b PROPN NNP Number=Sing _ _ _ _ 14 beta beta PROPN NNP Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 considerably considerably ADV RB _ _ _ _ _ 17 more more ADV RBR _ _ _ _ _ 18 stable stable ADJ JJ Degree=Pos _ _ _ _ 19 than than SCONJ IN _ _ _ _ _ 20 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 21 kappa kappa PROPN NNP Number=Sing _ _ _ _ 22 B b PROPN NNP Number=Sing _ _ _ _ 23 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 12821 # text = The half-life of both inhibitors is increased in HeLa cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 half half NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 life life NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 both both DET DT _ _ _ _ _ 7 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 increased increase VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 HeLa Hela PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 . . PUNCT . _ _ _ _ _ # sent_id = 12822 # text = In contrast, all other NF-kappa B/I kappa 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 all all DET DT _ _ _ _ _ 5 other other ADJ JJ Degree=Pos _ _ _ _ 6 NF NF NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B/ B/ PUNCT HYPH _ _ _ _ SpaceAfter=No 10 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 11 kappa kappa PROPN NNP Number=Sing _ _ _ _ # sent_id = 12823 # text = B molecules tested are relatively stable in both cell-types. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 molecules molecule NOUN NNS Number=Plur _ _ _ _ 3 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 relatively relatively ADV RB _ _ _ _ _ 6 stable stable ADJ JJ Degree=Pos _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 both both DET DT _ _ _ _ _ 9 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 types type NOUN NNS Number=Plur _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 12824 # text = The elevated turnover of endogenous I kappa B alpha in Namalwa cells is inhibited by a proteasome inhibitor and thus seems to be driven by the same degradation machinery as the slower turnover in non-B cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 elevated elevate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 turnover turnover NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B b PROPN NNP Number=Sing _ _ _ _ 9 alpha alpha PROPN NNP Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 Namalwa Namalwa PROPN NNP Number=Sing _ _ _ _ 12 cells cell NOUN NNS Number=Plur _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 proteasome proteasome ADJ JJ Degree=Pos _ _ _ _ 18 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 thus thus ADV RB _ _ _ _ _ 21 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 to to PART TO _ _ _ _ _ 23 be be AUX VB VerbForm=Inf _ _ _ _ 24 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 same same ADJ JJ Degree=Pos _ _ _ _ 28 degradation degradation NOUN NN Number=Sing _ _ _ _ 29 machinery machinery NOUN NN Number=Sing _ _ _ _ 30 as as ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 slower slower NOUN NN Number=Sing _ _ _ _ 33 turnover turnover NOUN NN Number=Sing _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 non non X AFX _ _ _ _ SpaceAfter=No 36 -B -b ADJ JJ Degree=Pos _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 12825 # text = Furthermore, we investigated the processes involved in persistent activation of NF-kappa B. TNF-alpha signaling leads to a rapid depletion of cellular 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 investigated investigate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 processes processe NOUN NNS Number=Plur _ _ _ _ 7 involved involved ADJ JJ Degree=Pos _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 persistent persistent ADJ JJ Degree=Pos _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kappa kappa NOUN NN Number=Sing _ _ _ _ 15 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ 17 TNF Tnf NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 alpha alpha NOUN NN Number=Sing _ _ _ _ 20 signaling signale NOUN NN Number=Sing _ _ _ _ 21 leads lead NOUN NNS Number=Plur _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 24 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 25 depletion depletion NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 cellular cellular NOUN NN Number=Sing _ _ _ _ # sent_id = 12826 # text = I kappa B beta pools. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa X FW Foreign=Yes _ _ _ _ 3 B b ADJ JJ Degree=Pos _ _ _ _ 4 beta beta NOUN NN Number=Sing _ _ _ _ 5 pools pool NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 . . PUNCT . _ _ _ _ _ # sent_id = 12827 # text = I kappa B alpha is efficiently resynthesized whereas I kappa B beta levels stay low for a prolonged time. 1 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 2 kappa kappa X FW Foreign=Yes _ _ _ _ 3 B b ADJ JJ Degree=Pos _ _ _ _ 4 alpha alpha NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 efficiently efficiently ADV RB _ _ _ _ _ 7 resynthesized resynthesize VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 whereas whereas SCONJ IN _ _ _ _ _ 9 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 10 kappa kappa X FW Foreign=Yes _ _ _ _ 11 B b ADJ JJ Degree=Pos _ _ _ _ 12 beta beta NOUN NN Number=Sing _ _ _ _ 13 levels level NOUN NNS Number=Plur _ _ _ _ 14 stay stay VERB VB VerbForm=Inf _ _ _ _ 15 low low ADV RB Degree=Pos _ _ _ _ 16 for for ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 prolonged prolonge VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 time time NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 12828 # text = NF-kappa B binding activity can be detected for several hours after stimulation. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 binding binding VERB VBG VerbForm=Ger _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 can can AUX MD VerbForm=Fin _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 detected detect VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 several several ADJ JJ Degree=Pos _ _ _ _ 12 hours hour NOUN NNS Number=Plur _ _ _ _ 13 after after ADP IN _ _ _ _ _ 14 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 12829 # text = We found that removal of the TNF-alpha containing medium causes a rapid decrease in nuclear NF-kappa B. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 found find VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 4 removal removal NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 TNF TNF NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 alpha alpha NOUN NN Number=Sing _ _ _ _ 10 containing contain VERB VBG VerbForm=Ger _ _ _ _ 11 medium medium ADJ JJ Degree=Pos _ _ _ _ 12 causes cause NOUN NNS Number=Plur _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 rapid rapid ADJ JJ Degree=Pos _ _ _ _ 15 decrease decrease NOUN NN Number=Sing _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa PROPN NNP Number=Sing _ _ _ _ 21 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 12830 # text = A phosphoform of newly synthesized I kappa B alpha is visible when degradation by the proteasome is inhibited and new I kappa B alpha displays the same properties regarding phosphorylation and degradation in response to a second inducer. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 phosphoform phosphoform NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 newly newly ADV RB _ _ _ _ _ 5 synthesized synthesize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B b PROPN NNP Number=Sing _ _ _ _ 9 alpha alpha PROPN NNP Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 visible visible ADJ JJ Degree=Pos _ _ _ _ 12 when when ADV WRB PronType=Int _ _ _ _ 13 degradation degradation NOUN NN Number=Sing _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 proteasome proteasome NOUN NN Number=Sing _ _ _ _ 17 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 inhibited inhibit ADJ JJ Degree=Pos _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 new new ADJ JJ Degree=Pos _ _ _ _ 21 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 22 kappa kappa PROPN NNP Number=Sing _ _ _ _ 23 B b PROPN NNP Number=Sing _ _ _ _ 24 alpha alpha PROPN NNP Number=Sing _ _ _ _ 25 displays display VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 same same ADJ JJ Degree=Pos _ _ _ _ 28 properties property NOUN NNS Number=Plur _ _ _ _ 29 regarding regard VERB VBG VerbForm=Ger _ _ _ _ 30 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ _ 31 and and CCONJ CC _ _ _ _ _ 32 degradation degradation NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 response response NOUN NN Number=Sing _ _ _ _ 35 to to ADP IN _ _ _ _ _ 36 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 37 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 38 inducer inducer NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 12831 # text = There is no significant difference in the turnover of pre- and post-inductive I kappa B alpha. 1 There there PRON EX _ _ _ _ _ 2 is be VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 no no DET DT _ _ _ _ _ 4 significant significant ADJ JJ Degree=Pos _ _ _ _ 5 difference difference NOUN NN Number=Sing _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 turnover turnover NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 pre pre X AFX _ _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 post post X AFX _ _ _ _ SpaceAfter=No 14 -inductive -inductive ADJ JJ Degree=Pos _ _ _ _ 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 kappa kappa PROPN NNP Number=Sing _ _ _ _ 17 B b PROPN NNP Number=Sing _ _ _ _ 18 alpha alpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 12832 # text = These observations suggest that resynthesis of I kappa B alpha and removal of the stimulus are obligatory steps for the inactivation of nuclear NF kappa B. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 resynthesis resynthesis NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ _ 10 alpha alpha NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 removal removal NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 stimulus stimulus NOUN NN Number=Sing _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 obligatory obligatory ADJ JJ Degree=Pos _ _ _ _ 18 steps step NOUN NNS Number=Plur _ _ _ _ 19 for for ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 inactivation inactivation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ _ 25 kappa kappa PROPN NNP Number=Sing _ _ _ _ 26 B. B. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12833 # text = Document 0030013136 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013136 0030013136 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12834 # text = HIV-1 1 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 -1 -1 NUM CD NumType=Card _ _ _ _ # sent_id = 12835 # text = Vpr suppresses immune activation and apoptosis through regulation of nuclear factor kappa B [see comments] 1 Vpr Vpr PROPN NNP Number=Sing _ _ _ _ 2 suppresses suppress VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 immune immune ADJ JJ Degree=Pos _ _ _ _ 4 activation activation NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 apoptosis apoptosis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 through through ADP IN _ _ _ _ _ 8 regulation regulation NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 factor factor NOUN NN Number=Sing _ _ _ _ 12 kappa kappa NOUN NN Number=Sing _ _ _ _ 13 B b NOUN NN Number=Sing _ _ _ _ 14 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 15 see see VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 16 comments comment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 12836 # text = The HIV-1 accessory gene product 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 accessory accessory NOUN NN Number=Sing _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 product product NOUN NN Number=Sing _ _ _ _ # sent_id = 12837 # text = Vpr can influence viral pathogenesis by affecting viral replication as well as host cell transcription and proliferation. 1 Vpr Vpr NOUN NN Number=Sing _ _ _ _ 2 can can AUX MD VerbForm=Fin _ _ _ _ 3 influence influence VERB VB VerbForm=Inf _ _ _ _ 4 viral viral ADJ JJ Degree=Pos _ _ _ _ 5 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 6 by by SCONJ IN _ _ _ _ _ 7 affecting affect VERB VBG VerbForm=Ger _ _ _ _ 8 viral viral ADJ JJ Degree=Pos _ _ _ _ 9 replication replication NOUN NN Number=Sing _ _ _ _ 10 as as ADV RB _ _ _ _ _ 11 well well ADV RB Degree=Pos _ _ _ _ 12 as as ADP IN _ _ _ _ _ 13 host host NOUN NN Number=Sing _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 12838 # text = We have investigated the effects of Vpr on host cell activation and confirm that it influences cellular proliferation. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 investigated investigate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 Vpr Vpr PROPN NNP Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 host host NOUN NN Number=Sing _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 confirm confirm VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 16 influences influence VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 18 proliferation proliferation NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 12839 # text = However, we have also found that Vpr modulates T-cell receptor (TCR)-triggered apoptosis in a manner similar to that of glucocorticoids. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 also also ADV RB _ _ _ _ _ 6 found find VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 Vpr Vpr ADJ JJ Degree=Pos _ _ _ _ 9 modulates modulate NOUN NNS Number=Plur _ _ _ _ 10 T- T- SYM NFP _ _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 receptor receptor NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 triggered trigger VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 manner manner NOUN NN Number=Sing _ _ _ _ 22 similar similar ADJ JJ Degree=Pos _ _ _ _ 23 to to ADP IN _ _ _ _ _ 24 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 12840 # text = In the absence of TCR-mediated activation, Vpr induces apoptosis whereas in its presence, Vpr interrupts the expected induction of apoptosis. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 absence absence NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 TCR TCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 Vpr Vpr PROPN NNP Number=Sing _ _ _ _ 11 induces induces VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 apoptosis apoptosis VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 whereas wherea NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 presence presence NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 Vpr Vpr PROPN NNP Number=Sing _ _ _ _ 19 interrupts interrupt VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 expected expect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 induction induction NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 12841 # text = This regulation of apoptosis is linked to Vpr suppression of NF-kappa B activity via the induction of I kappa B, an inhibitor of NF-kappa B. Further, Vpr suppresses expression of IL-2, IL-10, IL-12, TNF alpha and IL-4, all of which are NF-kappa B-dependent. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 regulation regulation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 linked link VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 Vpr Vpr VERB VB VerbForm=Inf _ _ _ _ 9 suppression suppression NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 activity activity NOUN NN Number=Sing _ _ _ _ 16 via via ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 induction induction NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 21 kappa kappa PROPN NNP Number=Sing _ _ _ _ 22 B B PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ 32 Further further ADV RB _ _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 Vpr Vpr PROPN NNP Number=Sing _ _ _ _ 35 suppresses suppress VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 expression expression NOUN NN Number=Sing _ _ _ _ 37 of of ADP IN _ _ _ _ _ 38 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 , , PUNCT , _ _ _ _ _ 42 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 , , PUNCT , _ _ _ _ _ 46 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 48 12 12 NUM CD NumType=Card _ _ _ SpaceAfter=No 49 , , PUNCT , _ _ _ _ _ 50 TNF TNF NOUN NN Number=Sing _ _ _ _ 51 alpha alpha NOUN NN Number=Sing _ _ _ _ 52 and and CCONJ CC _ _ _ _ _ 53 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 4 4 NUM CD NumType=Card _ _ _ SpaceAfter=No 56 , , PUNCT , _ _ _ _ _ 57 all all DET DT _ _ _ _ _ 58 of of ADP IN _ _ _ _ _ 59 which which PRON WDT PronType=Rel _ _ _ _ 60 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 61 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 62 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 63 kappa kappa NOUN NN Number=Sing _ _ _ _ 64 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 65 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 66 dependent dependent ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 67 . . PUNCT . _ _ _ _ _ # sent_id = 12842 # text = The effects of Vpr could be reversed by RU486. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 Vpr Vpr PROPN NNP Number=Sing _ _ _ _ 5 could could AUX MD VerbForm=Fin _ _ _ _ 6 be be AUX VB VerbForm=Inf _ _ _ _ 7 reversed reverse VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 RU486 RU486 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 12843 # text = Our finding that Vpr can regulate NF-kappa B supports the hypothesis that some aspects of viral pathogenesis are the consequence of cell dysregulation by Vpr. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 finding find VERB VBG VerbForm=Ger _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 Vpr Vpr PROPN NNP Number=Sing _ _ _ _ 5 can can AUX MD VerbForm=Fin _ _ _ _ 6 regulate regulate VERB VB VerbForm=Inf _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa PROPN NNP Number=Sing _ _ _ _ 10 B b PROPN NNP Number=Sing _ _ _ _ 11 supports support VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 hypothesis hypothesis NOUN NN Number=Sing _ _ _ _ 14 that that SCONJ IN _ _ _ _ _ 15 some some DET DT _ _ _ _ _ 16 aspects aspect NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 viral viral ADJ JJ Degree=Pos _ _ _ _ 19 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 20 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 consequence consequence NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 cell cell NOUN NN Number=Sing _ _ _ _ 25 dysregulation dysregulation NOUN NN Number=Sing _ _ _ _ 26 by by ADP IN _ _ _ _ _ 27 Vpr. Vpr. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12844 # text = Document 0030013138 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013138 0030013138 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12845 # text = Differential interaction of nuclear factors with the leukocyte-specific pp52 promoter in B and T cells. 1 Differential differential ADJ JJ Degree=Pos _ _ _ _ 2 interaction interaction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factors factor NOUN NNS Number=Plur _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 leukocyte leukocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 specific specific ADJ JJ Degree=Pos _ _ _ _ 11 pp52 pp52 NOUN NN Number=Sing _ _ _ _ 12 promoter promoter NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 B B PROPN NNP Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12846 # text = The leukocyte-specific, cytoskeleton-binding pp52 (LSP-1, WP-34) protein is widely expressed in multiple leukocyte lineages, including B and T lymphocytes, granulocytes, and macrophages. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 leukocyte leukocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 specific specific ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 cytoskeleton cytoskeleton NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 binding binding VERB VBG VerbForm=Ger _ _ _ _ 9 pp52 pp52 NOUN NN Number=Sing _ _ _ _ 10 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 11 LSP Lsp NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 WP WP SYM NFP _ _ _ _ SpaceAfter=No 16 - - SYM SYM _ _ _ _ SpaceAfter=No 17 34 34 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 ) ) PUNCT -RRB- _ _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 21 widely widely ADV RB _ _ _ _ _ 22 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 multiple multiple ADJ JJ Degree=Pos _ _ _ _ 25 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 26 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 , , PUNCT , _ _ _ _ _ 28 including include VERB VBG VerbForm=Ger _ _ _ _ 29 B b PROPN NNP Number=Sing _ _ _ _ 30 and and CCONJ CC _ _ _ _ _ 31 T t PROPN NNP Number=Sing _ _ _ _ 32 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 granulocytes granulocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 12847 # text = We previously detected a tissue-specific promoter preceding the exon encoding the N terminus of the pp52 leukocyte protein. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 previously previously ADV RB _ _ _ _ _ 3 detected detect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 tissue tissue NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 specific specific ADJ JJ Degree=Pos _ _ _ _ 8 promoter promoter NOUN NN Number=Sing _ _ _ _ 9 preceding precede VERB VBG VerbForm=Ger _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 exon exon NOUN NN Number=Sing _ _ _ _ 12 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 N N PROPN NNP Number=Sing _ _ _ _ 15 terminus terminus NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 pp52 pp52 NOUN NN Number=Sing _ _ _ _ 19 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 20 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 12848 # text = Here we describe the functional characterization of this promoter and identification of the factors in B and T cells that regulate its activity. 1 Here here ADV RB PronType=Dem _ _ _ _ 2 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 3 describe describe VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 functional functional ADJ JJ Degree=Pos _ _ _ _ 6 characterization characterization NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 identification identification NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 factors factor NOUN NNS Number=Plur _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 B b PROPN NNP Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 that that PRON WDT PronType=Rel _ _ _ _ 21 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 23 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 12849 # text = The pp52 promoter contains an initiator specifying the unique 5' terminus of pp52 mRNA, tandem pairs of Ets and SP1 motifs, and a lone C/EBP motif. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 pp52 pp52 NOUN NN Number=Sing _ _ _ _ 3 promoter promoter NOUN NN Number=Sing _ _ _ _ 4 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 initiator initiator NOUN NN Number=Sing _ _ _ _ 7 specifying specify VERB VBG VerbForm=Ger _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 unique unique ADJ JJ Degree=Pos _ _ _ _ 10 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 ' ' PUNCT '' _ _ _ _ _ 12 terminus terminus NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 pp52 pp52 NUM CD NumType=Card _ _ _ _ 15 mRNA mRNa NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 tandem tandem NOUN NN Number=Sing _ _ _ _ 18 pairs pair NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 Ets et NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 SP1 Sp1 NOUN NN Number=Sing _ _ _ _ 23 motifs motif NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 lone lone ADJ JJ Degree=Pos _ _ _ _ 28 C/ c/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 EBP EBP NOUN NN Number=Sing _ _ _ _ 30 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 12850 # text = All these motifs are essential and collectively control transcriptional activity. 1 All all DET PDT _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 motifs motif NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 essential essential ADJ JJ Degree=Pos _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 collectively collectively ADV RB _ _ _ _ _ 8 control control VERB VB VerbForm=Inf _ _ _ _ 9 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 10 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ _ # sent_id = 12851 # text = DNA binding studies and Ab supershift assays revealed that different combinations of factors interact with these motifs in B cells vs T cells. 1 DNA dna NOUN NN Number=Sing _ _ _ _ 2 binding bind VERB VBG VerbForm=Ger _ _ _ _ 3 studies study NOUN NNS Number=Plur _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 Ab Ab X GW _ _ _ _ _ 6 supershift supershift ADJ JJ Degree=Pos _ _ _ _ 7 assays assays NOUN NNS Number=Plur _ _ _ _ 8 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that SCONJ IN _ _ _ _ _ 10 different different ADJ JJ Degree=Pos _ _ _ _ 11 combinations combination NOUN NNS Number=Plur _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 factors factor NOUN NNS Number=Plur _ _ _ _ 14 interact interact NOUN NN Number=Sing _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 17 motifs motif NOUN NNS Number=Plur _ _ _ _ 18 in in ADP IN _ _ _ _ _ 19 B b ADJ JJ Degree=Pos _ _ _ _ 20 cells cell NOUN NNS Number=Plur _ _ _ _ 21 vs versus ADP IN Abbr=Yes _ _ _ _ 22 T t PROPN NNP Number=Sing _ _ _ _ 23 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 12852 # text = The Ets motifs are preferentially bound by PU-1 in B cell extracts from all stages of development, whereas a different Ets family member reacts with these motifs in T cell extracts. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 Ets ets NOUN NNS Number=Plur _ _ _ _ 3 motifs motif NOUN NNS Number=Plur _ _ _ _ 4 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 preferentially preferentially ADV RB _ _ _ _ _ 6 bound bound ADJ JJ Degree=Pos _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 PU PU PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 B b ADJ JJ Degree=Pos _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 extracts extract NOUN NNS Number=Plur _ _ _ _ 15 from from ADP IN _ _ _ _ _ 16 all all DET DT _ _ _ _ _ 17 stages stage NOUN NNS Number=Plur _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 development development NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 whereas whereas SCONJ IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 different different ADJ JJ Degree=Pos _ _ _ _ 24 Ets Ets PROPN NNP Number=Sing _ _ _ _ 25 family family NOUN NN Number=Sing _ _ _ _ 26 member member NOUN NN Number=Sing _ _ _ _ 27 reacts react VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 30 motifs motif NOUN NNS Number=Plur _ _ _ _ 31 in in ADP IN _ _ _ _ _ 32 T t PROPN NNP Number=Sing _ _ _ _ 33 cell cell NOUN NN Number=Sing _ _ _ _ 34 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 12853 # text = The C/EBP motif is bound by Ig/EBP-1 in pre-B cell and T cell extracts, but is replaced by nuclear factor-IL-6beta or a nuclear factor-IL-6beta-Ig/EBP-1 heterodimer in plasmacytoma cell extracts. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 C/ c/ NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 EBP Ebp NOUN NN Number=Sing _ _ _ _ 4 motif motif NOUN NN Number=Sing _ _ _ _ 5 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 bound bound ADJ JJ Degree=Pos _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 Ig/EBP Ig/EBP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 pre pre X AFX _ _ _ _ SpaceAfter=No 13 -B -b ADJ JJ Degree=Pos _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 T t NUM CD NumType=Card _ _ _ _ 17 cell cell NOUN NN Number=Sing _ _ _ _ 18 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 but but CCONJ CC _ _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 replaced replace VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 by by ADP IN _ _ _ _ _ 24 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 -IL -il NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 beta beta NOUN NN Number=Sing _ _ _ _ 30 or or CCONJ CC _ _ _ _ _ 31 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 33 factor-IL-6beta-Ig/EBP factor-il-6beta-ig/ebp NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 35 1 1 NUM CD NumType=Card _ _ _ _ 36 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 37 in in ADP IN _ _ _ _ _ 38 plasmacytoma plasmacytoma NOUN NN Number=Sing _ _ _ _ 39 cell cell NOUN NN Number=Sing _ _ _ _ 40 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 12854 # text = Despite its reported role as a negative regulator of transcription, Ig/EBP-1 appears to exert a stimulatory effect on this promoter. 1 Despite despite ADP IN _ _ _ _ _ 2 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 3 reported report VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 role role NOUN NN Number=Sing _ _ _ _ 5 as as ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 negative negative ADJ JJ Degree=Pos _ _ _ _ 8 regulator regulator NOUN NN Number=Sing _ _ _ _ 9 of of ADP IN _ _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 Ig/EBP Ig/EBP NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 to to PART TO _ _ _ _ _ 17 exert exert VERB VB VerbForm=Inf _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 stimulatory stimulatory ADJ JJ Degree=Pos _ _ _ _ 20 effect effect NOUN NN Number=Sing _ _ _ _ 21 on on ADP IN _ _ _ _ _ 22 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 23 promoter promoter NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 12855 # text = These findings reveal the features controlling the pp52 promoter in B and T cells and provide the foundation for determining the regulation of this promoter in other leukocyte lineages. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 reveal reveal VERB VB VerbForm=Inf _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 features feature NOUN NNS Number=Plur _ _ _ _ 6 controlling control VERB VBG VerbForm=Ger _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 pp52 pp52 NOUN NN Number=Sing _ _ _ _ 9 promoter promoter NOUN NN Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 B b PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 provide provide VERB VB VerbForm=Inf _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 foundation foundation NOUN NN Number=Sing _ _ _ _ 19 for for SCONJ IN _ _ _ _ _ 20 determining determine VERB VBG VerbForm=Ger _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 regulation regulation NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 25 promoter promoter NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 other other ADJ JJ Degree=Pos _ _ _ _ 28 leukocyte leukocyte NOUN NN Number=Sing _ _ _ _ 29 lineages lineage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12856 # text = Document 0030013140 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013140 0030013140 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12857 # text = Isolation of a rel-related human cDNA that potentially encodes the 65-kD subunit of NF-kappa B [published erratum appears in Science 1991 Oct 4;254(5028):11] 1 Isolation Isolation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 rel- rel- SYM SYM _ _ _ _ SpaceAfter=No 5 related related ADJ JJ Degree=Pos _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 cDNA cDNa NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 potentially potentially ADV RB _ _ _ _ _ 10 encodes encode VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 65 65 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 kD k NOUN NN Number=Sing _ _ _ _ 15 subunit subunit NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa PROPN NNP Number=Sing _ _ _ _ 20 B B PROPN NNP Number=Sing _ _ _ _ 21 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 published publish VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 23 erratum erratum NOUN NN Number=Sing _ _ _ _ 24 appears appear VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 Science Science PROPN NNP Number=Sing _ _ _ _ 27 1991 1991 NUM CD NumType=Card _ _ _ _ 28 Oct Oct PROPN NNP Number=Sing _ _ _ _ 29 4;254 4;254 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 5028 5028 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 33 :11 :11 NUM CD NumType=Card _ _ _ SpaceAfter=No 34 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 12858 # text = A DNA probe that spanned a domain conserved among the proto-oncogene c-rel, the Drosophila morphogen dorsal, and the p50 DNA binding subunit of NF-kappa B was generated from Jurkat T cell complementary DNA with the polymerase chain reaction (PCR) and degenerate oligonucleotides. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 DNA dna NOUN NN Number=Sing _ _ _ _ 3 probe probe NOUN NN Number=Sing _ _ _ _ 4 that that PRON WDT PronType=Rel _ _ _ _ 5 spanned span VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 domain domain NOUN NN Number=Sing _ _ _ _ 8 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 among among ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 proto proto NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 -oncogene -oncogene NOUN NN Number=Sing _ _ _ _ 13 c- c- PUNCT , _ _ _ _ SpaceAfter=No 14 rel rel NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 Drosophila Drosophila PROPN NNP Number=Sing _ _ _ _ 18 morphogen morphogen NOUN NN Number=Sing _ _ _ _ 19 dorsal dorsal NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 p50 p50 NOUN NN Number=Sing _ _ _ _ 24 DNA dna NOUN NN Number=Sing _ _ _ _ 25 binding binde VERB VBG VerbForm=Ger _ _ _ _ 26 subunit subunit NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappa kappa PROPN NNP Number=Sing _ _ _ _ 31 B b PROPN NNP Number=Sing _ _ _ _ 32 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 33 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 from from ADP IN _ _ _ _ _ 35 Jurkat Jurkat PROPN NNP Number=Sing _ _ _ _ 36 T T PROPN NNP Number=Sing _ _ _ _ 37 cell cell PROPN NNP Number=Sing _ _ _ _ 38 complementary complementary ADJ JJ Degree=Pos _ _ _ _ 39 DNA dna NOUN NN Number=Sing _ _ _ _ 40 with with ADP IN _ _ _ _ _ 41 the the DET DT Definite=Def|PronType=Art _ _ _ _ 42 polymerase polymerase NOUN NN Number=Sing _ _ _ _ 43 chain chain NOUN NN Number=Sing _ _ _ _ 44 reaction reaction NOUN NN Number=Sing _ _ _ _ 45 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 46 PCR PCR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 47 ) ) PUNCT -RRB- _ _ _ _ _ 48 and and CCONJ CC _ _ _ _ _ 49 degenerate degenerate ADJ JJ Degree=Pos _ _ _ _ 50 oligonucleotides oligonucleotide NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 12859 # text = This probe was used to identify a rel-related complementary DNA that hybridized to a 2.6-kilobase messenger RNA present in human T and B lymphocytes. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 probe probe NOUN NN Number=Sing _ _ _ _ 3 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 4 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 to to PART TO _ _ _ _ _ 6 identify identify VERB VB VerbForm=Inf _ _ _ _ 7 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 rel-related rel-relate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 complementary complementary ADJ JJ Degree=Pos _ _ _ _ 10 DNA dna NOUN NN Number=Sing _ _ _ _ 11 that that PRON WDT PronType=Rel _ _ _ _ 12 hybridized hybridize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 15 2.6 2.6 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kilobase kilobase NOUN NN Number=Sing _ _ _ _ 18 messenger messenger NOUN NN Number=Sing _ _ _ _ 19 RNA RNA PROPN NNP Number=Sing _ _ _ _ 20 present present VERB VB VerbForm=Inf _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 human human ADJ JJ Degree=Pos _ _ _ _ 23 T t PROPN NNP Number=Sing _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 B b ADJ JJ Degree=Pos _ _ _ _ 26 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 12860 # text = In vitro transcription and translation of the complementary DNA resulted in the synthesis of a protein with an apparent molecular size of 65 kilodaltons (kD). 1 In in ADP IN _ _ _ _ _ 2 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 3 transcription transcription NOUN NN Number=Sing _ _ _ _ 4 and and CCONJ CC _ _ _ _ _ 5 translation translation NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 complementary complementary ADJ JJ Degree=Pos _ _ _ _ 9 DNA dna NOUN NN Number=Sing _ _ _ _ 10 resulted result VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 with with ADP IN _ _ _ _ _ 18 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 apparent apparent ADJ JJ Degree=Pos _ _ _ _ 20 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 21 size size NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 65 65 NUM CD NumType=Card _ _ _ _ 24 kilodaltons kilodalton NOUN NNS Number=Plur _ _ _ _ 25 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 26 kD kD NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 12861 # text = The translated protein showed weak DNA binding with a specificity for the kappa B binding motif. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 translated translate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 weak weak ADJ JJ Degree=Pos _ _ _ _ 6 DNA dna NOUN NN Number=Sing _ _ _ _ 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 with with ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 specificity specificity NOUN NN Number=Sing _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 binding binde VERB VBG VerbForm=Ger _ _ _ _ 16 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 12862 # text = This protein-DNA complex comigrated with the complex obtained with the purified human p65 NF-kappa 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 DNA dna NOUN NN Number=Sing _ _ _ _ 5 complex complex NOUN NN Number=Sing _ _ _ _ 6 comigrated comigrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 complex complex NOUN NN Number=Sing _ _ _ _ 10 obtained obtaine VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 purified purify VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 p65 p65 NOUN NN Number=Sing _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa PROPN NNP Number=Sing _ _ _ _ # sent_id = 12863 # text = B subunit and binding was inhibited by I kappa B-alpha and -beta proteins. 1 B b ADJ JJ Degree=Pos _ _ _ _ 2 subunit subunit NOUN NN Number=Sing _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 binding binding VERB VBG VerbForm=Ger _ _ _ _ 5 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 6 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B- B- PUNCT , _ _ _ _ SpaceAfter=No 11 alpha alpha NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 beta beta NOUN NN Number=Sing _ _ _ _ 15 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 12864 # text = In addition, the 65-kD protein associated with the p50 subunit of NF-kappa B and the kappa B probe to form a complex with the same electrophoretic mobility as the NF-kappa B-DNA complex. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 65 65 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kD k NOUN NN Number=Sing _ _ _ _ 8 protein protein NOUN NN Number=Sing _ _ _ _ 9 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 p50 p50 NOUN NN Number=Sing _ _ _ _ 13 subunit subunit NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappa kappa PROPN NNP Number=Sing _ _ _ _ 18 B b PROPN NNP Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 kappa kappa NOUN NN Number=Sing _ _ _ _ 22 B b NOUN NN Number=Sing _ _ _ _ 23 probe probe NOUN NN Number=Sing _ _ _ _ 24 to to PART TO _ _ _ _ _ 25 form form VERB VB VerbForm=Inf _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 complex complex NOUN NN Number=Sing _ _ _ _ 28 with with ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 same same ADJ JJ Degree=Pos _ _ _ _ 31 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 32 mobility mobility NOUN NN Number=Sing _ _ _ _ 33 as as ADP IN _ _ _ _ _ 34 the the DET DT Definite=Def|PronType=Art _ _ _ _ 35 NF Nf PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 kappa kappa PROPN NNP Number=Sing _ _ _ _ 38 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 39 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 40 DNA dna NOUN NN Number=Sing _ _ _ _ 41 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 12865 # text = Therefore the rel-related 65-kD protein may represent the p65 subunit of the active NF-kappa B transcription factor complex. 1 Therefore therefore ADV RB _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 rel-related rel-related ADJ JJ Degree=Pos _ _ _ _ 4 65 65 NUM CD NumType=Card _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kD kd NOUN NN Number=Sing _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 may may AUX MD VerbForm=Fin _ _ _ _ 9 represent represent VERB VB VerbForm=Inf _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 p65 p65 NOUN NN Number=Sing _ _ _ _ 12 subunit subunit NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 active active ADJ JJ Degree=Pos _ _ _ _ 16 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappa kappa NOUN NN Number=Sing _ _ _ _ 19 B b NOUN NN Number=Sing _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 factor factor NOUN NN Number=Sing _ _ _ _ 22 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12866 # text = Document 0030013143 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013143 0030013143 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12867 # text = Inhibition of phorbol ester-induced monocytic differentiation by dexamethasone is associated with down-regulation of c-fos and c-jun (AP-1). 1 Inhibition Inhibition NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 4 ester ester NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT : _ _ _ _ SpaceAfter=No 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 8 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 9 by by ADP IN _ _ _ _ _ 10 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 11 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 down down ADV RB _ _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 regulation regulation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 fos fo NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 c- c- SYM NFP _ _ _ _ SpaceAfter=No 23 jun jun NOUN NN Number=Sing _ _ _ _ 24 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 25 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12868 # text = Previous studies have shown that treatment of human myeloid leukemia cells with 12-O-tetradecanoylphorbol-13-acetate (TPA) is associated with induction of monocytic differentiation and expression of the c-jun and c-fos early response genes. 1 Previous previous ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 shown show VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 treatment treatment NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 human human ADJ JJ Degree=Pos _ _ _ _ 9 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 10 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 with with ADP IN _ _ _ _ _ 13 12- 12- SYM NFP _ _ _ _ SpaceAfter=No 14 O of ADP IN Abbr=Yes _ _ _ SpaceAfter=No 15 -tetradecanoylphorbol -tetradecanoylphorbol ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 16 -13 -13 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 -acetate -acetate NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 with with ADP IN _ _ _ _ _ 24 induction induction NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 27 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 expression expression NOUN NN Number=Sing _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 the the DET DT Definite=Def|PronType=Art _ _ _ _ 32 c- c- SYM SYM _ _ _ _ SpaceAfter=No 33 jun jun NOUN NN Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 37 fos fo NOUN NNS Number=Plur _ _ _ _ 38 early early ADJ JJ Degree=Pos _ _ _ _ 39 response response NOUN NN Number=Sing _ _ _ _ 40 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 12869 # text = The present work demonstrates that the glucocorticoid dexamethasone inhibits TPA-induced increases in c-jun and c-fos mRNA levels in U-937 leukemia cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 present present ADJ JJ Degree=Pos _ _ _ _ 3 work work NOUN NN Number=Sing _ _ _ _ 4 demonstrates demonstrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 8 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 9 inhibits inhibit NOUN NNS Number=Plur _ _ _ _ 10 TPA TPa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 increases increase NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 c- c- SYM NFP _ _ _ _ SpaceAfter=No 16 jun jun NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 fos fo NOUN NNS Number=Plur _ _ _ _ 21 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 22 levels level NOUN NNS Number=Plur _ _ _ _ 23 in in ADP IN _ _ _ _ _ 24 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT , _ _ _ _ SpaceAfter=No 26 937 937 NUM CD NumType=Card _ _ _ _ 27 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 28 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 12870 # text = These findings were associated with a block in appearance of the monocytic phenotype, including inhibition of TPA-induced increases in lamin A, lamin C, and vimentin transcripts. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 block block NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 appearance appearance NOUN NN Number=Sing _ _ _ _ 10 of of ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 13 phenotype phenotype NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 including include VERB VBG VerbForm=Ger _ _ _ _ 16 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 increases increase NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 lamin lamin NOUN NN Number=Sing _ _ _ _ 24 A A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 , , PUNCT , _ _ _ _ _ 26 lamin lamin PROPN NNP Number=Sing _ _ _ _ 27 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 vimentin vimentin ADJ JJ Degree=Pos _ _ _ _ 31 transcripts transcript NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 12871 # text = Other studies have demonstrated that TPA-induced monocytic differentiation and expression of the c-jun and c-fos genes in myeloid leukemia cells are regulated by protein kinase C (PKC). 1 Other other ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 demonstrated demonstrate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 6 TPA TPa NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 10 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 expression expression NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 c- c- SYM NFP _ _ _ _ SpaceAfter=No 16 jun jun NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 fos fo NOUN NNS Number=Plur _ _ _ _ 21 genes gene NOUN NNS Number=Plur _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 myeloid myeloid ADJ JJ Degree=Pos _ _ _ _ 24 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 25 cells cell NOUN NNS Number=Plur _ _ _ _ 26 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 by by ADP IN _ _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ _ 30 kinase kinase NOUN NN Number=Sing _ _ _ _ 31 C C PROPN NNP Number=Sing _ _ _ _ 32 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 33 PKC PKC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ _ # sent_id = 12872 # text = The finding that dexamethasone has no effect on TPA-induced activation of PKC suggests that this glucocorticoid inhibits signals downstream or parallel to this enzyme. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 finding finding NOUN NN Number=Sing _ _ _ _ 3 that that PRON WDT PronType=Rel _ _ _ _ 4 dexamethasone dexamethasone VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 no no DET DT _ _ _ _ _ 7 effect effect NOUN NN Number=Sing _ _ _ _ 8 on on ADP IN _ _ _ _ _ 9 TPA TPa PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 induced induced VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 PKC PKC PROPN NNP Number=Sing _ _ _ _ 15 suggests suggest VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 that that SCONJ IN _ _ _ _ _ 17 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 18 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ _ 19 inhibits inhibit VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 signals signal NOUN NNS Number=Plur _ _ _ _ 21 downstream downstream ADJ JJ Degree=Pos _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 parallel parallel ADJ JJ Degree=Pos _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 26 enzyme enzyme NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 12873 # text = Nuclear run-on assays demonstrate that: (1) induction of c-jun and c-fos expression by TPA is regulated by transcriptional mechanisms, (2) TPA-induced expression of c-jun and c-fos does not require protein synthesis, and (3) TPA-induced expression of both genes is inhibited at the transcriptional level by dexamethasone. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 run run VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 on on ADP IN _ _ _ _ _ 5 assays assay NOUN NNS Number=Plur _ _ _ _ 6 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ SpaceAfter=No 8 : : PUNCT : _ _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 1 1 X LS _ _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 induction induction NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 c- c- SYM NFP _ _ _ _ SpaceAfter=No 15 jun jun NOUN NN Number=Sing _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 fos fos NOUN NN Number=Sing _ _ _ _ 20 expression expression NOUN NN Number=Sing _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 TPA TPA PROPN NNP Number=Sing _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 27 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 30 2 2 X LS _ _ _ _ SpaceAfter=No 31 ) ) PUNCT -RRB- _ _ _ _ _ 32 TPA TPa NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 35 expression expression NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 c- c- SYM NFP _ _ _ _ SpaceAfter=No 38 jun jun NOUN NN Number=Sing _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 c c NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 42 fos fo NOUN NNS Number=Plur _ _ _ _ 43 does do AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 44 not not PART RB _ _ _ _ _ 45 require require VERB VB VerbForm=Inf _ _ _ _ 46 protein protein NOUN NN Number=Sing _ _ _ _ 47 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 , , PUNCT , _ _ _ _ _ 49 and and CCONJ CC _ _ _ _ _ 50 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 51 3 3 X LS _ _ _ _ SpaceAfter=No 52 ) ) PUNCT -RRB- _ _ _ _ _ 53 TPA TPa NOUN NN Number=Sing _ _ _ SpaceAfter=No 54 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 55 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 56 expression expression NOUN NN Number=Sing _ _ _ _ 57 of of ADP IN _ _ _ _ _ 58 both both DET DT _ _ _ _ _ 59 genes gene NOUN NNS Number=Plur _ _ _ _ 60 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 61 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 62 at at ADP IN _ _ _ _ _ 63 the the DET DT Definite=Def|PronType=Art _ _ _ _ 64 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 65 level level NOUN NN Number=Sing _ _ _ _ 66 by by ADP IN _ _ _ _ _ 67 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ SpaceAfter=No 68 . . PUNCT . _ _ _ _ _ # sent_id = 12874 # text = To further define the effects of dexamethasone at the molecular level, we prepared a series of deleted c-jun promoter fragments linked to the chloramphenicol acetyltransferase (CAT) gene. 1 To to PART TO _ _ _ _ _ 2 further further ADV RB _ _ _ _ _ 3 define define VERB VB VerbForm=Inf _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 effects effect NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 dexamethasone dexamethasone NOUN NN Number=Sing _ _ _ _ 8 at at ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 molecular molecular ADJ JJ Degree=Pos _ _ _ _ 11 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 14 prepared prepare VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 series series NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 deleted delete VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 c- c- SYM SYM _ _ _ _ SpaceAfter=No 20 jun jun ADJ JJ Degree=Pos _ _ _ _ 21 promoter promoter NOUN NN Number=Sing _ _ _ _ 22 fragments fragment NOUN NNS Number=Plur _ _ _ _ 23 linked link VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 27 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 28 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 29 CAT cat NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 12875 # text = Increases in CAT activity during transient expression of these constructs in TPA-treated U-937 cells could be assigned to the region (-97 to -20) of the promoter that contains the AP-1 binding site. 1 Increases increase VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 2 in in ADP IN _ _ _ _ _ 3 CAT cat ADJ JJ Degree=Pos _ _ _ _ 4 activity activity NOUN NN Number=Sing _ _ _ _ 5 during during ADP IN _ _ _ _ _ 6 transient transient ADJ JJ Degree=Pos _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 10 constructs construct NOUN NNS Number=Plur _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 TPA TPA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 U U PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - SYM SYM _ _ _ _ SpaceAfter=No 17 937 937 NUM CD NumType=Card _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 could could AUX MD VerbForm=Fin _ _ _ _ 20 be be AUX VB VerbForm=Inf _ _ _ _ 21 assigned assign VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 to to ADP IN _ _ _ _ _ 23 the the DET DT Definite=Def|PronType=Art _ _ _ _ 24 region region NOUN NN Number=Sing _ _ _ _ 25 (- (- PUNCT . _ _ _ _ SpaceAfter=No 26 97 97 NUM CD NumType=Card _ _ _ _ 27 to to ADP IN _ _ _ _ _ 28 - - SYM SYM _ _ _ _ SpaceAfter=No 29 20 20 NUM CD NumType=Card _ _ _ SpaceAfter=No 30 ) ) PUNCT -RRB- _ _ _ _ _ 31 of of ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 promoter promoter NOUN NN Number=Sing _ _ _ _ 34 that that PRON WDT PronType=Rel _ _ _ _ 35 contains contain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ _ 40 binding binding NOUN NN Number=Sing _ _ _ _ 41 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 12876 # text = This induction of CAT activity was sensitive to dexamethasone. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 induction induction NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 CAT Cat ADJ JJ Degree=Pos _ _ _ _ 5 activity activity NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 sensitive sensitive ADJ JJ Degree=Pos _ _ _ _ 8 to to PART TO _ _ _ _ _ 9 dexamethasone dexamethasone VERB VB VerbForm=Inf _ _ _ SpaceAfter=No 10 . . PUNCT . _ _ _ _ _ # sent_id = 12877 # text = These findings suggest that dexamethasone down-regulates TPA-induced transcription of the c-jun gene during monocytic differentiation by inhibiting activation of the AP-1 site. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 dexamethasone dexamethasone PRON NN Number=Sing _ _ _ _ 6 down down ADV RB _ _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 regulates regulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 TPA TPa NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 transcription transcription NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 c- c- SYM SYM _ _ _ _ SpaceAfter=No 16 jun jun NOUN NN Number=Sing _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 during during ADP IN _ _ _ _ _ 19 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 20 differentiation differentiation NOUN NN Number=Sing _ _ _ _ 21 by by SCONJ IN _ _ _ _ _ 22 inhibiting inhibit VERB VBG VerbForm=Ger _ _ _ _ 23 activation activation NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ _ 29 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12878 # text = Document 0030013146 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013146 0030013146 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12879 # text = Induction of interleukin-12 p40 transcript by CD40 ligation via activation of nuclear factor-kappaB. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 interleukin interleukin ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 4 -12 -12 NUM CD NumType=Card _ _ _ _ 5 p40 p40 NUM CD NumType=Card _ _ _ _ 6 transcript transcript NOUN NN Number=Sing _ _ _ _ 7 by by ADP IN _ _ _ _ _ 8 CD40 CD40 NUM CD NumType=Card _ _ _ _ 9 ligation ligation NOUN NN Number=Sing _ _ _ _ 10 via via ADP IN _ _ _ _ _ 11 activation activation NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB NOUN NN Number=Sing _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12880 # text = Interleukin-12 is produced in response to infection with bacteria or parasites or to bacterial constituents such as LPS in monocytes/macrophages and dendritic cells, and also generated by the interaction between activated T cells and antigen-presenting cells via CD40-CD40 ligand (CD40L). 1 Interleukin Interleukin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 12 12 NUM CD NumType=Card _ _ _ _ 4 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 produced produce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 6 in in ADP IN _ _ _ _ _ 7 response response NOUN NN Number=Sing _ _ _ _ 8 to to ADP IN _ _ _ _ _ 9 infection infection NOUN NN Number=Sing _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 bacteria bacteria NOUN NN Number=Sing _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 parasites parasite NOUN NNS Number=Plur _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 17 constituents constituent NOUN NNS Number=Plur _ _ _ _ 18 such such ADJ JJ Degree=Pos _ _ _ _ 19 as as ADP IN _ _ _ _ _ 20 LPS Lp NOUN NNS Number=Plur _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 / / PUNCT , _ _ _ _ SpaceAfter=No 24 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 25 and and CCONJ CC _ _ _ _ _ 26 dendritic dendritic ADJ JJ Degree=Pos _ _ _ _ 27 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 also also ADV RB _ _ _ _ _ 31 generated generate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 by by ADP IN _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 interaction interaction NOUN NN Number=Sing _ _ _ _ 35 between between ADP IN _ _ _ _ _ 36 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 T T PROPN NNP Number=Sing _ _ _ _ 38 cells cell NOUN NNS Number=Plur _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 antigen antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 41 - - PUNCT , _ _ _ _ SpaceAfter=No 42 presenting present VERB VBG VerbForm=Ger _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ _ 44 via via ADP IN _ _ _ _ _ 45 CD40-CD40 CD40-CD40 NUM CD NumType=Card _ _ _ _ 46 ligand ligand NOUN NN Number=Sing _ _ _ _ 47 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 48 CD40L CD40L NOUN NN Number=Sing _ _ _ SpaceAfter=No 49 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 50 . . PUNCT . _ _ _ _ _ # sent_id = 12881 # text = So far, transcriptional analyses of p40 have been carried out only using bacterial constituents such as LPS as stimuli. 1 So so ADV RB _ _ _ _ _ 2 far far ADV RB Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 5 analyses analysis NOUN NNS Number=Plur _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 p40 p40 NOUN NN Number=Sing _ _ _ _ 8 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 9 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 10 carried carry VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 out out ADP RP _ _ _ _ _ 12 only only ADV RB _ _ _ _ _ 13 using use VERB VBG VerbForm=Ger _ _ _ _ 14 bacterial bacterial ADJ JJ Degree=Pos _ _ _ _ 15 constituents constituent NOUN NNS Number=Plur _ _ _ _ 16 such such ADJ JJ Degree=Pos _ _ _ _ 17 as as ADP IN _ _ _ _ _ 18 LPS LPS NOUN NNS Number=Plur _ _ _ _ 19 as as ADP IN _ _ _ _ _ 20 stimuli stimuli NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ _ # sent_id = 12882 # text = In the present study, we have characterized the transcriptional induction of p40 by CD40 ligation in a human B lymphoblastoid cell line, Daudi, and a human acute monocytic leukemia cell line, THP-1. 1 In in ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 present present ADJ JJ Degree=Pos _ _ _ _ 4 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 7 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 8 characterized characterize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 11 induction induction NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 p40 p40 NUM CD NumType=Card _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 CD40 CD40 NUM CD NumType=Card _ _ _ _ 16 ligation ligation NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 19 human human ADJ JJ Degree=Pos _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 lymphoblastoid lymphoblastoid NOUN NN Number=Sing _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 Daudi Daudi PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 and and CCONJ CC _ _ _ _ _ 28 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 acute acute NOUN NN Number=Sing _ _ _ _ 31 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 32 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 33 cell cell NOUN NN Number=Sing _ _ _ _ 34 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 , , PUNCT , _ _ _ _ _ 36 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 39 . . PUNCT . _ _ _ _ _ # sent_id = 12883 # text = These cells, stimulated by an agonistic monoclonal antibody against CD40 or by transfection with a CD40L expression vector, secreted p40 and showed enhanced p40 mRNA expression. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 agonistic agonistic ADJ JJ Degree=Pos _ _ _ _ 8 monoclonal monoclonal ADJ JJ Degree=Pos _ _ _ _ 9 antibody antibody NOUN NN Number=Sing _ _ _ _ 10 against against ADP IN _ _ _ _ _ 11 CD40 CD40 PROPN NNP Number=Sing _ _ _ _ 12 or or CCONJ CC _ _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 transfection transfection NOUN NN Number=Sing _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 CD40L Cd40l NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 vector vector NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 secreted secret VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 22 p40 p40 NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 26 p40 p40 NUM CD NumType=Card _ _ _ _ 27 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 12884 # text = Sequence analysis of the p40 promoter region identified two potential nuclear factor (NF)-kappaB binding sites conserved between mouse and human. 1 Sequence sequence NOUN NN Number=Sing _ _ _ _ 2 analysis analysis NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 p40 p40 NUM CD NumType=Card _ _ _ _ 6 promoter promoter NOUN NN Number=Sing _ _ _ _ 7 region region NOUN NN Number=Sing _ _ _ _ 8 identified identify VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 two two NUM CD NumType=Card _ _ _ _ 10 potential potential ADJ JJ Degree=Pos _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 16 - - PUNCT , _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 sites site NOUN NNS Number=Plur _ _ _ _ 20 conserved conserve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 between between ADP IN _ _ _ _ _ 22 mouse mouse NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 12885 # text = Electrophoretic mobility shift assay revealed that the potential NF-kappaB binding sequence which is located around 120 bp upstream of the transcription initiation site in murine and human p40 genes formed an NF-kappaB complex with nuclear extract from Daudi cells stimulated by CD40 ligation. 1 Electrophoretic Electrophoretic ADJ JJ Degree=Pos _ _ _ _ 2 mobility mobility NOUN NN Number=Sing _ _ _ _ 3 shift shift NOUN NN Number=Sing _ _ _ _ 4 assay assay NOUN NN Number=Sing _ _ _ _ 5 revealed reveal VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 that that SCONJ IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 potential potential ADJ JJ Degree=Pos _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 12 binding binding VERB VBG VerbForm=Ger _ _ _ _ 13 sequence sequence NOUN NN Number=Sing _ _ _ _ 14 which which PRON WDT PronType=Rel _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 located locate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 17 around around ADP IN _ _ _ _ _ 18 120 120 NUM CD NumType=Card _ _ _ _ 19 bp bp NOUN NN Number=Sing _ _ _ _ 20 upstream upstream NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 transcription transcription NOUN NN Number=Sing _ _ _ _ 24 initiation initiation NOUN NN Number=Sing _ _ _ _ 25 site site NOUN NN Number=Sing _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 murine murine NOUN NN Number=Sing _ _ _ _ 28 and and CCONJ CC _ _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 p40 p40 NUM CD NumType=Card _ _ _ _ 31 genes gene NOUN NNS Number=Plur _ _ _ _ 32 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 34 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 37 complex complex NOUN NN Number=Sing _ _ _ _ 38 with with ADP IN _ _ _ _ _ 39 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 40 extract extract NOUN NN Number=Sing _ _ _ _ 41 from from ADP IN _ _ _ _ _ 42 Daudi Daudi PROPN NNP Number=Sing _ _ _ _ 43 cells cell NOUN NNS Number=Plur _ _ _ _ 44 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 45 by by ADP IN _ _ _ _ _ 46 CD40 CD40 NUM CD NumType=Card _ _ _ _ 47 ligation ligation NOUN NN Number=Sing _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 12886 # text = Moreover, transfection of Daudi cells with the polymerized NF-kappaB binding sequence ligated to a thymidine kinase/chloramphenicol acetyltransferase (CAT) reporter plasmid greatly induced CAT activity, but transfection with the polymerized mutated NF-kappaB binding sequence did not. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 transfection transfection NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Daudi Daudi ADJ JJ Degree=Pos _ _ _ _ 6 cells cell NOUN NNS Number=Plur _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 polymerized polymerize VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 13 binding binding VERB VBG VerbForm=Ger _ _ _ _ 14 sequence sequence NOUN NN Number=Sing _ _ _ _ 15 ligated ligate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 thymidine thymidine NOUN NN Number=Sing _ _ _ _ 19 kinase kinase NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 / / PUNCT , _ _ _ _ SpaceAfter=No 21 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 22 acetyltransferase acetyltransferase NOUN NN Number=Sing _ _ _ _ 23 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 24 CAT cat NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 reporter reporter NOUN NN Number=Sing _ _ _ _ 27 plasmid plasmid NOUN NN Number=Sing _ _ _ _ 28 greatly greatly ADV RB _ _ _ _ _ 29 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 30 CAT cat NOUN NN Number=Sing _ _ _ _ 31 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 but but CCONJ CC _ _ _ _ _ 34 transfection transfection NOUN NN Number=Sing _ _ _ _ 35 with with ADP IN _ _ _ _ _ 36 the the DET DT Definite=Def|PronType=Art _ _ _ _ 37 polymerized polymerize NOUN NN Number=Sing _ _ _ _ 38 mutated mutate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 41 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 42 binding binding VERB VBG VerbForm=Ger _ _ _ _ 43 sequence sequence NOUN NN Number=Sing _ _ _ _ 44 did do VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 45 not not PART RB _ _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 12887 # text = These results suggest that the NF-kappaB binding site located around 120 bp upstream of the transcription initiation site in murine and human p40 promoter regions could be important for the p40 induction by CD40 ligation via activation of NF-kappaB. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 9 binding binding VERB VBG VerbForm=Ger _ _ _ _ 10 site site NOUN NN Number=Sing _ _ _ _ 11 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 around around ADV RB _ _ _ _ _ 13 120 120 NUM CD NumType=Card _ _ _ _ 14 bp bp NOUN NN Number=Sing _ _ _ _ 15 upstream upstream NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 transcription transcription NOUN NN Number=Sing _ _ _ _ 19 initiation initiation NOUN NN Number=Sing _ _ _ _ 20 site site NOUN NN Number=Sing _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 murine murine NOUN NN Number=Sing _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 human human ADJ JJ Degree=Pos _ _ _ _ 25 p40 p40 NOUN NN Number=Sing _ _ _ _ 26 promoter promoter NOUN NN Number=Sing _ _ _ _ 27 regions region NOUN NNS Number=Plur _ _ _ _ 28 could could AUX MD VerbForm=Fin _ _ _ _ 29 be be AUX VB VerbForm=Inf _ _ _ _ 30 important important ADJ JJ Degree=Pos _ _ _ _ 31 for for ADP IN _ _ _ _ _ 32 the the DET DT Definite=Def|PronType=Art _ _ _ _ 33 p40 p40 NOUN NN Number=Sing _ _ _ _ 34 induction induction NOUN NN Number=Sing _ _ _ _ 35 by by ADP IN _ _ _ _ _ 36 CD40 CD40 NUM CD NumType=Card _ _ _ _ 37 ligation ligation NOUN NN Number=Sing _ _ _ _ 38 via via ADP IN _ _ _ _ _ 39 activation activation NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 kappaB. kappaB. PROPN NNP Number=Sing _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12888 # text = Document 0030013151 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013151 0030013151 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12889 # text = Surfactant protein 1 Surfactant Surfactant ADJ JJ Degree=Pos _ _ _ _ 2 protein protein NOUN NN Number=Sing _ _ _ _ # sent_id = 12890 # text = A activates NF-kappa B in the THP-1 monocytic cell line. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 1 1 NUM CD NumType=Card _ _ _ _ 12 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12891 # text = The expression of many genes for which products are involved in inflammation is controlled by the transcriptional regulator nuclear factor (NF)-kappa B. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 expression expression NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 many many ADJ JJ Degree=Pos _ _ _ _ 5 genes gene NOUN NNS Number=Plur _ _ _ _ 6 for for ADP IN _ _ _ _ _ 7 which which PRON WDT PronType=Int _ _ _ _ 8 products product NOUN NNS Number=Plur _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 involved involve ADJ JJ Degree=Pos _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 controlled controll VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 by by ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 regulator regulator NOUN NN Number=Sing _ _ _ _ 19 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 12892 # text = Because surfactant protein (SP) A is involved in local host defense in the lung and alters immune cell function by modulating the expression of proinflammatory cytokines as well as surface proteins involved in inflammation, we hypothesized that SP-A exerts its action, at least in part, via activation of NF-kappa B. 1 Because because SCONJ IN _ _ _ _ _ 2 surfactant surfactant ADJ JJ Degree=Pos _ _ _ _ 3 protein protein NOUN NN Number=Sing _ _ _ _ 4 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 5 SP sp NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 ) ) PUNCT -RRB- _ _ _ _ _ 7 A a NOUN NN Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 involved involved ADJ JJ Degree=Pos _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 local local ADJ JJ Degree=Pos _ _ _ _ 12 host host NOUN NN Number=Sing _ _ _ _ 13 defense defense NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 lung lung NOUN NN Number=Sing _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 alters alter X GW _ _ _ _ _ 19 immune immune ADJ JJ Degree=Pos _ _ _ _ 20 cell cell NOUN NN Number=Sing _ _ _ _ 21 function function NOUN NN Number=Sing _ _ _ _ 22 by by SCONJ IN _ _ _ _ _ 23 modulating modulat VERB VBG VerbForm=Ger _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 expression expression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 proinflammatory proinflammatory ADJ JJ Degree=Pos _ _ _ _ 28 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 29 as as ADV RB _ _ _ _ _ 30 well well ADV RB Degree=Pos _ _ _ _ 31 as as ADP IN _ _ _ _ _ 32 surface surface NOUN NN Number=Sing _ _ _ _ 33 proteins protein NOUN NNS Number=Plur _ _ _ _ 34 involved involved ADJ JJ Degree=Pos _ _ _ _ 35 in in ADP IN _ _ _ _ _ 36 inflammation inflammation NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 39 hypothesized hypothesize VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 40 that that SCONJ IN _ _ _ _ _ 41 SP sp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 44 exerts exert NOUN NNS Number=Plur _ _ _ _ 45 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 46 action action NOUN NN Number=Sing _ _ _ SpaceAfter=No 47 , , PUNCT , _ _ _ _ _ 48 at at ADV RB _ _ _ _ _ 49 least least ADV RBS Degree=Sup _ _ _ _ 50 in in ADP IN _ _ _ _ _ 51 part part NOUN NN Number=Sing _ _ _ SpaceAfter=No 52 , , PUNCT , _ _ _ _ _ 53 via via ADP IN _ _ _ _ _ 54 activation activation NOUN NN Number=Sing _ _ _ _ 55 of of ADP IN _ _ _ _ _ 56 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 57 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 58 kappa kappa PROPN NNP Number=Sing _ _ _ _ 59 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 60 . . PUNCT . _ _ _ _ _ # sent_id = 12893 # text = We used gel shift assays to determine whether SP-A activated NF-kappa B in the THP-1 cell line, a human monocytic cell line. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 used use VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 gel gel NOUN NN Number=Sing _ _ _ _ 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assays assays VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 6 to to PART TO _ _ _ _ _ 7 determine determine VERB VB VerbForm=Inf _ _ _ _ 8 whether whether SCONJ IN _ _ _ _ _ 9 SP sp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa NOUN NN Number=Sing _ _ _ _ 16 B b NOUN NN Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 1 1 NUM CD NumType=Card _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 26 human human ADJ JJ Degree=Pos _ _ _ _ 27 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 28 cell cell NOUN NN Number=Sing _ _ _ _ 29 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 12894 # text = Activation of NF-kappa B in THP-1 cells by SP-A doses as low as 1 microgram/ml occurred within 30 min of SP-A treatment, peaked at 60 min, and then declined. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa PROPN NNP Number=Sing _ _ _ _ 6 B b PROPN NNP Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 THP THP PROPN NNP Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT , _ _ _ _ SpaceAfter=No 10 1 1 NUM CD NumType=Card _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 SP sp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT , _ _ _ _ SpaceAfter=No 15 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 doses dos NOUN NNS Number=Plur _ _ _ _ 17 as as ADV RB _ _ _ _ _ 18 low low ADJ JJ Degree=Pos _ _ _ _ 19 as as ADP IN _ _ _ _ _ 20 1 1 NUM CD NumType=Card _ _ _ _ 21 microgram microgram NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 / / PUNCT , _ _ _ _ SpaceAfter=No 23 ml ml NOUN NN Number=Sing _ _ _ _ 24 occurred occur VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 within within ADP IN _ _ _ _ _ 26 30 30 NUM CD NumType=Card _ _ _ _ 27 min min NOUN NNS Number=Plur _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 SP sp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT , _ _ _ _ SpaceAfter=No 31 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 32 treatment treatment NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 , , PUNCT , _ _ _ _ _ 34 peaked peake VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 35 at at ADP IN _ _ _ _ _ 36 60 60 NUM CD NumType=Card _ _ _ _ 37 min min NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 and and CCONJ CC _ _ _ _ _ 40 then then ADV RB PronType=Dem _ _ _ _ 41 declined decline VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 42 . . PUNCT . _ _ _ _ _ # sent_id = 12895 # text = This activation is inhibited by known inhibitors of NF-kappa B or by simultaneous treatment of the cells with surfactant lipids. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 4 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 by by ADP IN _ _ _ _ _ 6 known know VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa PROPN NNP Number=Sing _ _ _ _ 12 B b PROPN NNP Number=Sing _ _ _ _ 13 or or CCONJ CC _ _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 simultaneous simultaneous ADJ JJ Degree=Pos _ _ _ _ 16 treatment treatment NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 surfactant surfactant ADJ JJ Degree=Pos _ _ _ _ 22 lipids lipid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ _ # sent_id = 12896 # text = Moreover, the NF-kappa B inhibitors blocked SP-A-dependent increases in tumor necrosis factor-alpha mRNA levels. 1 Moreover moreover ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 9 blocked block VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 SP sp NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 A a NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 15 increases increase NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 tumor tumor NOUN NN Number=Sing _ _ _ _ 18 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 alpha alpha NOUN NN Number=Sing _ _ _ _ 22 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 23 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 12897 # text = These observations suggest a mechanism by which SP-A plays a role in the pathogenesis of some lung conditions and point to potential therapeutic measures that could be used to prevent SP-A induced inflammation in the lung. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 observations observation NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 5 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 6 by by ADP IN _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 SP sp NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 A a NOUN NN Number=Sing _ _ _ _ 11 plays play VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 role role NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 some some DET DT _ _ _ _ _ 19 lung lung NOUN NN Number=Sing _ _ _ _ 20 conditions condition NOUN NNS Number=Plur _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 point point NOUN NN Number=Sing _ _ _ _ 23 to to PART TO _ _ _ _ _ 24 potential potential VERB VB VerbForm=Inf _ _ _ _ 25 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 26 measures measure NOUN NNS Number=Plur _ _ _ _ 27 that that PRON WDT PronType=Rel _ _ _ _ 28 could could AUX MD VerbForm=Fin _ _ _ _ 29 be be AUX VB VerbForm=Inf _ _ _ _ 30 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 31 to to PART TO _ _ _ _ _ 32 prevent prevent VERB VB VerbForm=Inf _ _ _ _ 33 SP sp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 - - PUNCT , _ _ _ _ SpaceAfter=No 35 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 36 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 37 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 38 in in ADP IN _ _ _ _ _ 39 the the DET DT Definite=Def|PronType=Art _ _ _ _ 40 lung lung NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12898 # text = Document 0030013152 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013152 0030013152 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12899 # text = Inactivation of IkappaBbeta by the tax protein of human T-cell leukemia virus type 1: a potential mechanism for constitutive induction of NF-kappaB. 1 Inactivation Inactivation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 IkappaBbeta IkappaBbeta PROPN NNP Number=Sing _ _ _ _ 4 by by ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 tax tax NOUN NN Number=Sing _ _ _ _ 7 protein protein NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 13 virus virus NOUN NN Number=Sing _ _ _ _ 14 type type NOUN NN Number=Sing _ _ _ _ 15 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 16 : : PUNCT : _ _ _ _ _ 17 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 18 potential potential ADJ JJ Degree=Pos _ _ _ _ 19 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 20 for for ADP IN _ _ _ _ _ 21 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 22 induction induction NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12900 # text = In resting T lymphocytes, the transcription factor NF-kappaB is sequestered in the cytoplasm via interactions with members of the I kappa B family of inhibitors, including IkappaBalpha and IkappaBbeta. 1 In in SCONJ IN _ _ _ _ _ 2 resting rest VERB VBG VerbForm=Ger _ _ _ _ 3 T t PROPN NNP Number=Sing _ _ _ _ 4 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 5 , , PUNCT , _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 transcription transcription NOUN NN Number=Sing _ _ _ _ 8 factor factor NOUN NN Number=Sing _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT , _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 sequestered sequester VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 17 via via ADP IN _ _ _ _ _ 18 interactions interaction NOUN NNS Number=Plur _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 members member NOUN NNS Number=Plur _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 I I PROPN NNP Number=Sing _ _ _ _ 24 kappa kappa PROPN NNP Number=Sing _ _ _ _ 25 B b ADJ JJ Degree=Pos _ _ _ _ 26 family family NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 including include VERB VBG VerbForm=Ger _ _ _ _ 31 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 IkappaBbeta IkappaBbeta PROPN NNP Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 12901 # text = During normal T-cell activation, IkappaBalpha is rapidly phosphorylated, ubiquitinated, and degraded by the 26S proteasome, thus permitting the release of functional NF-kappaB. 1 During during ADP IN _ _ _ _ _ 2 normal normal ADJ JJ Degree=Pos _ _ _ _ 3 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 cell cell NOUN NN Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 8 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 rapidly rapidly ADV RB _ _ _ _ _ 10 phosphorylated phosphorylate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 ubiquitinated ubiquitinate VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 degraded degrad VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 26 26 NUM CD NumType=Card _ _ _ SpaceAfter=No 19 S be NOUN NN Number=Sing _ _ _ _ 20 proteasome proteasome NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 thus thus ADV RB _ _ _ _ _ 23 permitting permitt VERB VBG VerbForm=Ger _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 release release NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 functional functional ADJ JJ Degree=Pos _ _ _ _ 28 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 12902 # text = In contrast to its transient pattern of nuclear induction during an immune response, NF-kappaB is constitutively activated in cells expressing the Tax transforming protein of human T-cell leukemia virus type I (HTLV-1). 1 In in ADP IN _ _ _ _ _ 2 contrast contrast NOUN NN Number=Sing _ _ _ _ 3 to to ADP IN _ _ _ _ _ 4 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 5 transient transient ADJ JJ Degree=Pos _ _ _ _ 6 pattern pattern NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 9 induction induction NOUN NN Number=Sing _ _ _ _ 10 during during ADP IN _ _ _ _ _ 11 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 immune immune ADJ JJ Degree=Pos _ _ _ _ 13 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 , , PUNCT , _ _ _ _ _ 15 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 18 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 19 constitutively constitutively ADV RB _ _ _ _ _ 20 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 cells cell NOUN NNS Number=Plur _ _ _ _ 23 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 Tax tax NOUN NN Number=Sing _ _ _ _ 26 transforming transform VERB VBG VerbForm=Ger _ _ _ _ 27 protein protein NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 human human ADJ JJ Degree=Pos _ _ _ _ 30 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 cell cell NOUN NN Number=Sing _ _ _ _ 32 leukemia leukemia NOUN NN Number=Sing _ _ _ _ 33 virus virus NOUN NN Number=Sing _ _ _ _ 34 type type NOUN NN Number=Sing _ _ _ _ 35 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 36 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 37 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - SYM SYM _ _ _ _ SpaceAfter=No 39 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 12903 # text = Recent studies indicate that HTLV-1 Tax targets IkappaBalpha to the ubiquitin-proteasome pathway. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 Tax tax NOUN NN Number=Sing _ _ _ _ 9 targets target NOUN NNS Number=Plur _ _ _ _ 10 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 11 to to ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 ubiquitin- ubiquitin- SYM SYM _ _ _ _ SpaceAfter=No 14 proteasome proteasome ADJ JJ Degree=Pos _ _ _ _ 15 pathway pathway NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 12904 # text = However, it remains unclear how this viral protein induces a persistent rather than transient NF-kappaB response. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 4 remains remain VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 unclear unclear ADJ JJ Degree=Pos _ _ _ _ 6 how how ADV WRB PronType=Int _ _ _ _ 7 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 8 viral viral ADJ JJ Degree=Pos _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 induces induce VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 persistent persistent NOUN NN Number=Sing _ _ _ _ 13 rather rather ADV RB _ _ _ _ _ 14 than than ADP IN _ _ _ _ _ 15 transient transient ADJ JJ Degree=Pos _ _ _ _ 16 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 19 response response NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 12905 # text = In this report, we provide evidence that in addition to acting on IkappaBalpha, Tax stimulates the turnover Of IkappaBbeta via a related targeting mechanism. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 provide provide VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 evidence evidence NOUN NN Number=Sing _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 addition addition NOUN NN Number=Sing _ _ _ _ 11 to to SCONJ IN _ _ _ _ _ 12 acting act VERB VBG VerbForm=Ger _ _ _ _ 13 on on ADP IN _ _ _ _ _ 14 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 Tax Tax PROPN NNP Number=Sing _ _ _ _ 17 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 turnover turnover NOUN NN Number=Sing _ _ _ _ 20 Of of ADP IN _ _ _ _ _ 21 IkappaBbet IkappaBbet PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 via via ADP IN _ _ _ _ _ 24 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 25 related related ADJ JJ Degree=Pos _ _ _ _ 26 targeting targeting NOUN NN Number=Sing _ _ _ _ 27 mechanism mechanism NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 12906 # text = Like IkappaBalpha, Tax-mediated breakdown of IkappaBbeta in transfected T lymphocytes is blocked either by cell-permeable proteasome inhibitors or by mutation Of IkappaBbeta at two serine residues present within its N-terminal region. 1 Like like ADP IN _ _ _ _ _ 2 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 Tax tax PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT , _ _ _ _ SpaceAfter=No 6 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 breakdown breakdown ADP IN _ _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 IkappaBbeta IkappaBbeta PROPN NNP Number=Sing _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 T t PROPN NNP Number=Sing _ _ _ _ 13 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 14 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 15 blocked block VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 either either CCONJ CC _ _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 permeable permeable ADJ JJ Degree=Pos _ _ _ _ 21 proteasome proteasome ADJ JJ Degree=Pos _ _ _ _ 22 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 23 or or CCONJ CC _ _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 mutation mutation NOUN NN Number=Sing _ _ _ _ 26 Of of ADP IN _ _ _ _ _ 27 IkappaBbeta IkappaBbeta PROPN NNP Number=Sing _ _ _ _ 28 at at ADP IN _ _ _ _ _ 29 two two NUM CD NumType=Card _ _ _ _ 30 serine serine NOUN NN Number=Sing _ _ _ _ 31 residues residue NOUN NNS Number=Plur _ _ _ _ 32 present present ADJ JJ Degree=Pos _ _ _ _ 33 within within ADP IN _ _ _ _ _ 34 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 35 N- n- PUNCT : _ _ _ _ SpaceAfter=No 36 terminal terminal ADJ JJ Degree=Pos _ _ _ _ 37 region region NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 12907 # text = Despite the dual specificity of HTLV-1 Tax for IkappaBalpha and IkappaBbeta at the protein level, Tax selectively stimulates NF-kappaB-directed transcription of the IkappaBalpha gene. 1 Despite despite ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 dual dual ADJ JJ Degree=Pos _ _ _ _ 4 specificity specificity NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 1 1 NUM CD NumType=Card _ _ _ _ 9 Tax tax NOUN NN Number=Sing _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 IkappaBbeta IkappaBbeta PROPN NNP Number=Sing _ _ _ _ 14 at at ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 protein protein NOUN NN Number=Sing _ _ _ _ 17 level level NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 Tax tax PROPN NNP Number=Sing _ _ _ _ 20 selectively selectively ADV RB _ _ _ _ _ 21 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 26 directed direct VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 transcription transcription NOUN NN Number=Sing _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 IkappaBalpha IkappaBalpha PROPN NNP Number=Sing _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 12908 # text = Consequently, IkappaBbeta protein expression is chronically downregulated in HTLV-1-infected T lymphocytes. 1 Consequently consequently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 IkappaBbeta IkappaBbeta PROPN NNP Number=Sing _ _ _ _ 4 protein protein NOUN NN Number=Sing _ _ _ _ 5 expression expression NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 chronically chronically ADV RB _ _ _ _ _ 8 downregulated downregulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 HTLV HTLV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ _ # sent_id = 12909 # text = These findings with IkappaBbeta provide a potential mechanism for the constitutive activation of NF-kappaB in Tax-expressing cells. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 findings finding NOUN NNS Number=Plur _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 IkappaBbeta IkappaBbeta PROPN NNP Number=Sing _ _ _ _ 5 provide provide VERB VB VerbForm=Inf _ _ _ _ 6 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 7 potential potential ADJ JJ Degree=Pos _ _ _ _ 8 mechanism mechanism NOUN NN Number=Sing _ _ _ _ 9 for for ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 12 activation activation NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 Tax tax PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT , _ _ _ _ SpaceAfter=No 20 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12910 # text = Document 0030013156 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013156 0030013156 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12911 # text = The role of nuclear factor-kappa B in cytokine gene regulation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 role role NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 -kappa -kappa NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 10 gene gene NOUN NN Number=Sing _ _ _ _ 11 regulation regulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12912 # text = Transcription factors are DNA-binding proteins that regulate gene expression. 1 Transcription Transcription NOUN NN Number=Sing _ _ _ _ 2 factors factor NOUN NNS Number=Plur _ _ _ _ 3 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 proteins protein NOUN NNS Number=Plur _ _ _ _ 8 that that PRON WDT PronType=Rel _ _ _ _ 9 regulate regulate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 gene gene ADJ JJ Degree=Pos _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 . . PUNCT . _ _ _ _ _ # sent_id = 12913 # text = Nuclear factor-kappa B (NF-kappa B) is a critical transcription factor for maximal expression of many cytokines that are involved in the pathogenesis of inflammatory diseases, such as adult respiratory distress syndrome (ARDS) and sepsis syndrome. 1 Nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 2 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 kappa kappa NOUN NN Number=Sing _ _ _ _ 10 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 critical critical ADJ JJ Degree=Pos _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 maximal maximal ADJ JJ Degree=Pos _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 many many ADJ JJ Degree=Pos _ _ _ _ 22 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 23 that that PRON WDT PronType=Rel _ _ _ _ 24 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 25 involved involved ADJ JJ Degree=Pos _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 pathogenesis pathogenesis NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 31 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 such such ADJ JJ Degree=Pos _ _ _ _ 34 as as ADP IN _ _ _ _ _ 35 adult adult ADJ JJ Degree=Pos _ _ _ _ 36 respiratory respiratory NOUN NN Number=Sing _ _ _ _ 37 distress distress NOUN NN Number=Sing _ _ _ _ 38 syndrome syndrome NOUN NN Number=Sing _ _ _ _ 39 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 40 ARDS ARDS PROPN NNP Number=Sing _ _ _ SpaceAfter=No 41 ) ) PUNCT -RRB- _ _ _ _ _ 42 and and CCONJ CC _ _ _ _ _ 43 sepsis sepsis DET DT Number=Sing|PronType=Dem _ _ _ _ 44 syndrome syndrome NOUN NN Number=Sing _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 12914 # text = Activation and regulation of NF-kappa B are tightly controlled by a group of inhibitory proteins (I kappa B) that sequester NF-kappa B in the cytoplasm of immune/inflammatory effector cells. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 and and CCONJ CC _ _ _ _ _ 3 regulation regulation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa NOUN NN Number=Sing _ _ _ _ 8 B b NOUN NN Number=Sing _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 tightly tightly ADV RB _ _ _ _ _ 11 controlled control VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 group group NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 inhibitory inhibitory ADJ JJ Degree=Pos _ _ _ _ 17 proteins protein NOUN NNS Number=Plur _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 20 kappa kappa PROPN NNP Number=Sing _ _ _ _ 21 B b PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 24 sequester sequester NOUN NN Number=Sing _ _ _ _ 25 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 cytoplasm cytoplasm NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 immune immune ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 34 / / PUNCT , _ _ _ _ SpaceAfter=No 35 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 36 effector effector NOUN NN Number=Sing _ _ _ _ 37 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 12915 # text = NF-kappa B activation involves signaled phosphorylation, ubiquitination, and proteolysis of I kappa B. 1 NF Nf ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B b NOUN NN Number=Sing _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 involves involf VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 signaled signale VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 phosphorylation phosphorylation NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 , , PUNCT , _ _ _ _ _ 10 ubiquitination ubiquitination NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 proteolysis proteolysis NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 I I PRON PRP Case=Nom|Number=Sing|Person=1|PronType=Prs _ _ _ _ 16 kappa kappa PROPN NNP Number=Sing _ _ _ _ 17 B. B. PROPN NNP Number=Sing _ _ _ _ # sent_id = 12916 # text = Liberated NF-kappa B migrates to the nucleus, where it binds to specific promoter sites and activates gene transcription. 1 Liberated Liberate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 2 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 migrates migrate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 to to ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 nucleus nucleus NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 where where ADV WRB PronType=Rel _ _ _ _ 12 it it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 13 binds bind VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 specific specific ADJ JJ Degree=Pos _ _ _ _ 16 promoter promoter NOUN NN Number=Sing _ _ _ _ 17 sites site NOUN NNS Number=Plur _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 20 gene gene ADJ JJ Degree=Pos _ _ _ _ 21 transcription transcription NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 12917 # text = The activation of NF-kappa B initiates both extracellular and intracellular regulatory events that result in autoregulation of the inflammatory cascade through modulation of NF-kappa B activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 activation activation NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 kappa kappa PROPN NNP Number=Sing _ _ _ _ 7 B b PROPN NNP Number=Sing _ _ _ _ 8 initiates initiate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 both both CCONJ CC _ _ _ _ _ 10 extracellular extracellular ADJ JJ Degree=Pos _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 intracellular intracellular ADJ JJ Degree=Pos _ _ _ _ 13 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 14 events event NOUN NNS Number=Plur _ _ _ _ 15 that that PRON WDT PronType=Rel _ _ _ _ 16 result result VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 autoregulation autoregulation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 22 cascade cascade NOUN NN Number=Sing _ _ _ _ 23 through through ADP IN _ _ _ _ _ 24 modulation modulation NOUN NN Number=Sing _ _ _ _ 25 of of ADP IN _ _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa NOUN NN Number=Sing _ _ _ _ 29 B b NOUN NN Number=Sing _ _ _ _ 30 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 12918 # text = Recently, activation of NF-kappa B has been linked to ARDS and has been shown to be a critical proximal step in the initiation of neutrophilic inflammation in animal models. 1 Recently recently ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 activation activation NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 kappa kappa PROPN NNP Number=Sing _ _ _ _ 8 B B PROPN NNP Number=Sing _ _ _ _ 9 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 11 linked link VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 12 to to ADP IN _ _ _ _ _ 13 ARDS ARDS PROPN NNP Number=Sing _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 17 shown show VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 be be AUX VB VerbForm=Inf _ _ _ _ 20 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 21 critical critical ADJ JJ Degree=Pos _ _ _ _ 22 proximal proximal ADJ JJ Degree=Pos _ _ _ _ 23 step step NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 initiation initiation NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 neutrophilic neutrophilic ADJ JJ Degree=Pos _ _ _ _ 29 inflammation inflammation NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 animal animal NOUN NN Number=Sing _ _ _ _ 32 models model NOUN NNS Number=Plur _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 12919 # text = Activation of NF-kappa B can be inhibited in vivo by treatment with antioxidants, corticosteroids, and the induction of endotoxin tolerance. 1 Activation Activation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B b NOUN NN Number=Sing _ _ _ _ 7 can can AUX MD VerbForm=Fin _ _ _ _ 8 be be AUX VB VerbForm=Inf _ _ _ _ 9 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 vivo vivo NOUN NN Number=Sing _ _ _ _ 12 by by ADP IN _ _ _ _ _ 13 treatment treatment NOUN NN Number=Sing _ _ _ _ 14 with with ADP IN _ _ _ _ _ 15 antioxidants antioxidant NOUN NNS Number=Plur _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 corticosteroids corticosteroid NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 induction induction NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 endotoxin endotoxin NOUN NN Number=Sing _ _ _ _ 24 tolerance tolerance NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 12920 # text = Identification of more specific and efficacious inhibitors of NF-kappa B activation might prove beneficial for the treatment of cytokine-mediated inflammatory diseases. 1 Identification identification NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 more more ADJ JJR Degree=Cmp _ _ _ _ 4 specific specific ADJ JJ Degree=Pos _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 efficacious efficacious ADJ JJ Degree=Pos _ _ _ _ 7 inhibitors inhibitor NOUN NNS Number=Plur _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 activation activation NOUN NN Number=Sing _ _ _ _ 14 might might AUX MD VerbForm=Fin _ _ _ _ 15 prove prove VERB VB VerbForm=Inf _ _ _ _ 16 beneficial beneficial ADJ JJ Degree=Pos _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 treatment treatment NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 cytokine cytokine NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 24 inflammatory inflammatory ADJ JJ Degree=Pos _ _ _ _ 25 diseases diseasis NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12921 # text = Document 0030013159 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013159 0030013159 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12922 # text = Superantigens activate HIV-1 gene expression in monocytic cells. 1 Superantigens Superantigens NOUN NNS Number=Plur _ _ _ _ 2 activate activate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 gene gene NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12923 # text = Binding of superantigens to MHC class II molecules results in transduction of biochemical signals leading to cellular activation and gene expression. 1 Binding binding NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 superantigens superantigen NOUN NNS Number=Plur _ _ _ _ 4 to to ADP IN _ _ _ _ _ 5 MHC MHC PROPN NNP Number=Sing _ _ _ _ 6 class class NOUN NN Number=Sing _ _ _ _ 7 II ii NUM CD NumType=Card _ _ _ _ 8 molecules molecule NOUN NNS Number=Plur _ _ _ _ 9 results result NOUN NNS Number=Plur _ _ _ _ 10 in in ADP IN _ _ _ _ _ 11 transduction transduction NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 14 signals signal NOUN NNS Number=Plur _ _ _ _ 15 leading lead VERB VBG VerbForm=Ger _ _ _ _ 16 to to ADP IN _ _ _ _ _ 17 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 18 activation activation NOUN NN Number=Sing _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 gene gene NOUN NN Number=Sing _ _ _ _ 21 expression expression NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 12924 # text = We demonstrate that the staphylococcal superantigens toxic shock syndrome toxin-1 (TSST-1) and staphylococcal enterotoxin A (SEA) activate HIV-1-LTR-driven transcription of chloramphenicol acetyl transferase in the human monocytic cell line THP-1. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 staphylococcal staphylococcal NOUN NN Number=Sing _ _ _ _ 6 superantigens superantigen VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 toxic toxic ADJ JJ Degree=Pos _ _ _ _ 8 shock shock NOUN NN Number=Sing _ _ _ _ 9 syndrome syndrome NOUN NN Number=Sing _ _ _ _ 10 toxin toxin NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 1 1 NUM CD NumType=Card _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 TSST Tsst NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 X LS _ _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 staphylococcal staphylococcal ADJ JJ Degree=Pos _ _ _ _ 20 enterotoxin enterotoxin NOUN NN Number=Sing _ _ _ _ 21 A a NOUN NN Number=Sing _ _ _ _ 22 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 23 SEA Sea NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 ) ) PUNCT -RRB- _ _ _ _ _ 25 activate activate ADJ JJ Degree=Pos _ _ _ _ 26 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 -LTR- -LTR- PUNCT : _ _ _ _ SpaceAfter=No 30 driven driven VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 31 transcription transcription NOUN NN Number=Sing _ _ _ _ 32 of of ADP IN _ _ _ _ _ 33 chloramphenicol chloramphenicol NOUN NN Number=Sing _ _ _ _ 34 acetyl acetyl NOUN NN Number=Sing _ _ _ _ 35 transferase transferase NOUN NN Number=Sing _ _ _ _ 36 in in ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 human human ADJ JJ Degree=Pos _ _ _ _ 39 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 40 cell cell NOUN NN Number=Sing _ _ _ _ 41 line line NOUN NN Number=Sing _ _ _ _ 42 THP Thp NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 45 . . PUNCT . _ _ _ _ _ # sent_id = 12925 # text = Induction of HIV-1-LTR-driven transcription in THP-1 cells by superantigens was associated with the induction of nuclear factor-kappa B DNA-binding activity. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 LTR Ltr NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 transcription transcription NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 THP THP NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT , _ _ _ _ SpaceAfter=No 14 1 1 NUM CD NumType=Card _ _ _ _ 15 cells cell NOUN NNS Number=Plur _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 superantigens superantigen NOUN NNS Number=Plur _ _ _ _ 18 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 19 associated associate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 20 with with ADP IN _ _ _ _ _ 21 the the DET DT Definite=Def|PronType=Art _ _ _ _ 22 induction induction NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 25 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ _ 29 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 binding binding VERB VBG VerbForm=Ger _ _ _ _ 32 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 12926 # text = Superantigens also increased viral protein secretion from the granulocyte-macrophage colony-stimulating factor-pretreated chronically infected human monocytic cell line U1. Induction of HIV-1 gene expression in monocytic cells by superantigens occurred via tumor necrosis factor-alpha-dependent and -independent mechanisms. 1 Superantigens Superantigens PROPN NNP Number=Sing _ _ _ _ 2 also also ADV RB _ _ _ _ _ 3 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 viral viral ADJ JJ Degree=Pos _ _ _ _ 5 protein protein NOUN NN Number=Sing _ _ _ _ 6 secretion secretion NOUN NN Number=Sing _ _ _ _ 7 from from ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 12 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 stimulating stimulating VERB VBG VerbForm=Ger _ _ _ _ 15 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 pretreated pretreate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 chronically chronically ADV RB _ _ _ _ _ 19 infected infect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 22 cell cell NOUN NN Number=Sing _ _ _ _ 23 line line NOUN NN Number=Sing _ _ _ _ 24 U1 u1 NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ 26 Induction Induction NOUN NN Number=Sing _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 29 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 30 1 1 NUM CD NumType=Card _ _ _ _ 31 gene gene NOUN NN Number=Sing _ _ _ _ 32 expression expression NOUN NN Number=Sing _ _ _ _ 33 in in ADP IN _ _ _ _ _ 34 monocytic monocytic ADJ JJ Degree=Pos _ _ _ _ 35 cells cell NOUN NNS Number=Plur _ _ _ _ 36 by by ADP IN _ _ _ _ _ 37 superantigens superantigen NOUN NNS Number=Plur _ _ _ _ 38 occurred occur VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 via via ADP IN _ _ _ _ _ 40 tumor tumor NOUN NN Number=Sing _ _ _ _ 41 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 42 factor-alpha factor-alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 44 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 45 and and CCONJ CC _ _ _ _ _ 46 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 47 independent independent ADJ JJ Degree=Pos _ _ _ _ 48 mechanisms mechanism NOUN NNS Number=Plur _ _ _ SpaceAfter=No 49 . . PUNCT . _ _ _ _ _ # sent_id = 12927 # text = Our results suggest that superantigens and other MHC class II ligands may activate HIV-1 gene expression in monocytes/macrophages. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 superantigens superantigen NOUN NNS Number=Plur _ _ _ _ 6 and and CCONJ CC _ _ _ _ _ 7 other other ADJ JJ Degree=Pos _ _ _ _ 8 MHC MHC PROPN NNP Number=Sing _ _ _ _ 9 class class NOUN NN Number=Sing _ _ _ _ 10 II ii NUM CD NumType=Card _ _ _ _ 11 ligands ligand NOUN NNS Number=Plur _ _ _ _ 12 may may AUX MD VerbForm=Fin _ _ _ _ 13 activate activate VERB VB VerbForm=Inf _ _ _ _ 14 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 1 1 NUM CD NumType=Card _ _ _ _ 17 gene gene NOUN NN Number=Sing _ _ _ _ 18 expression expression NOUN NN Number=Sing _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 monocytes monocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 21 / / PUNCT , _ _ _ _ SpaceAfter=No 22 macrophages macrophage NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12928 # text = Document 0030013160 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013160 0030013160 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12929 # text = Glucocorticoid-induced apoptosis of human leukemic cells is caused by the repressive function of the glucocorticoid receptor. 1 Glucocorticoid Glucocorticoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 leukemic leukemic ADJ JJ Degree=Pos _ _ _ _ 8 cells cell NOUN NNS Number=Plur _ _ _ _ 9 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 10 caused cause VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 repressive repressive ADJ JJ Degree=Pos _ _ _ _ 14 function function NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 18 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12930 # text = Induction of apoptosis in lymphocytes, which may account for the therapeutic effects of glucocorticoids in various diseases including leukemia, depends on the glucocorticoid receptor. 1 Induction Induction NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 which which PRON WDT PronType=Rel _ _ _ _ 8 may may AUX MD VerbForm=Fin _ _ _ _ 9 account account VERB VB VerbForm=Inf _ _ _ _ 10 for for ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 13 effects effect NOUN NNS Number=Plur _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 glucocorticoids glucocorticoid NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 various various ADJ JJ Degree=Pos _ _ _ _ 18 diseases diseasis NOUN NNS Number=Plur _ _ _ _ 19 including include VERB VBG VerbForm=Ger _ _ _ _ 20 leukemia leukemion NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 depends depend VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 23 on on ADP IN _ _ _ _ _ 24 the the DET DT Definite=Def|PronType=Art _ _ _ _ 25 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 26 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 12931 # text = However, the events leading from the activated receptor to cell lysis are not understood. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 events event NOUN NNS Number=Plur _ _ _ _ 5 leading lead VERB VBG VerbForm=Ger _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 receptor receptor NOUN NN Number=Sing _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 cell cell VERB VB VerbForm=Inf _ _ _ _ 12 lysis lysis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 13 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 14 not not PART RB _ _ _ _ _ 15 understood understand VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 16 . . PUNCT . _ _ _ _ _ # sent_id = 12932 # text = A prevailing hypothesis postulates induction of so-called 'lysis genes' by the activated receptor. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 prevailing prevailing NOUN NN Number=Sing _ _ _ _ 3 hypothesis hypothesis PRON PRP$ Gender=Masc|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 4 postulates postulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 induction induction NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 so so ADV RB _ _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 called call VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 ' ' PUNCT `` _ _ _ _ SpaceAfter=No 11 lysis lysis NOUN NN Number=Sing _ _ _ _ 12 genes gene NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 ' ' PUNCT '' _ _ _ _ _ 14 by by ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 . . PUNCT . _ _ _ _ _ # sent_id = 12933 # text = In this study, we show that an activation-deficient glucocorticoid receptor mutant is as effective as the wild-type receptor in repression of AP-1 activity, inhibition of interleukin-2 production, inhibition of c-myc expression and induction of apoptosis. 1 In in ADP IN _ _ _ _ _ 2 this this DET DT Number=Sing|PronType=Dem _ _ _ _ 3 study study NOUN NN Number=Sing _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 6 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 deficient deficient ADJ JJ Degree=Pos _ _ _ _ 12 glucocorticoid glucocorticoid NOUN NN Number=Sing _ _ _ _ 13 receptor receptor NOUN NN Number=Sing _ _ _ _ 14 mutant mutant NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 as as ADV RB _ _ _ _ _ 17 effective effective ADJ JJ Degree=Pos _ _ _ _ 18 as as ADP IN _ _ _ _ _ 19 the the DET DT Definite=Def|PronType=Art _ _ _ _ 20 wild wild NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 type type NOUN NN Number=Sing _ _ _ _ 23 receptor receptor NOUN NN Number=Sing _ _ _ _ 24 in in ADP IN _ _ _ _ _ 25 repression repression NOUN NN Number=Sing _ _ _ _ 26 of of ADP IN _ _ _ _ _ 27 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 31 , , PUNCT , _ _ _ _ _ 32 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 33 of of ADP IN _ _ _ _ _ 34 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 36 2 2 NUM CD NumType=Card _ _ _ _ 37 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 , , PUNCT , _ _ _ _ _ 39 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 40 of of ADP IN _ _ _ _ _ 41 c- c- SYM NFP _ _ _ _ SpaceAfter=No 42 myc myc NOUN NN Number=Sing _ _ _ _ 43 expression expression NOUN NN Number=Sing _ _ _ _ 44 and and CCONJ CC _ _ _ _ _ 45 induction induction NOUN NN Number=Sing _ _ _ _ 46 of of ADP IN _ _ _ _ _ 47 apoptosis apoptosis PRON DT Number=Sing|PronType=Dem _ _ _ SpaceAfter=No 48 . . PUNCT . _ _ _ _ _ # sent_id = 12934 # text = Furthermore, we show that retinoic acid can also induce apoptosis in these cells through the retinoic acid receptor, whose repressive functions but not target site specificity, are similar to those of the glucocorticoid receptor. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 4 show show VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 5 that that SCONJ IN _ _ _ _ _ 6 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 7 acid acid NOUN NN Number=Sing _ _ _ _ 8 can can AUX MD VerbForm=Fin _ _ _ _ 9 also also ADV RB _ _ _ _ _ 10 induce induce VERB VB VerbForm=Inf _ _ _ _ 11 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 14 cells cell NOUN NNS Number=Plur _ _ _ _ 15 through through ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 retinoic retinoic ADJ JJ Degree=Pos _ _ _ _ 18 acid acid ADJ JJ Degree=Pos _ _ _ _ 19 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 , , PUNCT , _ _ _ _ _ 21 whose whose PRON WP$ Poss=Yes|PronType=Int _ _ _ _ 22 repressive repressive ADJ JJ Degree=Pos _ _ _ _ 23 functions function NOUN NNS Number=Plur _ _ _ _ 24 but but CCONJ CC _ _ _ _ _ 25 not not PART RB _ _ _ _ _ 26 target target VERB VB VerbForm=Inf _ _ _ _ 27 site site NOUN NN Number=Sing _ _ _ _ 28 specificity specificity NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 , , PUNCT , _ _ _ _ _ 30 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 31 similar similar ADJ JJ Degree=Pos _ _ _ _ 32 to to ADP IN _ _ _ _ _ 33 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 34 of of ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ _ 37 receptor receptor NOUN NN Number=Sing _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 12935 # text = Therefore, the primary effect of the receptor in glucocorticoid-mediated apoptosis correlates with transcriptional repression rather than activation and could be mediated by interference with other transcription factors required for cell survival. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 primary primary ADJ JJ Degree=Pos _ _ _ _ 5 effect effect NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 receptor receptor NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 glucocorticoid glucocorticoid ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 11 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 12 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 14 correlates correlate NOUN NNS Number=Plur _ _ _ _ 15 with with ADP IN _ _ _ _ _ 16 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 17 repression repression NOUN NN Number=Sing _ _ _ _ 18 rather rather ADV RB _ _ _ _ _ 19 than than ADP IN _ _ _ _ _ 20 activation activation NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 could could AUX MD VerbForm=Fin _ _ _ _ 23 be be AUX VB VerbForm=Inf _ _ _ _ 24 mediated mediate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 by by ADP IN _ _ _ _ _ 26 interference interference NOUN NN Number=Sing _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 other other ADJ JJ Degree=Pos _ _ _ _ 29 transcription transcription NOUN NN Number=Sing _ _ _ _ 30 factors factor NOUN NNS Number=Plur _ _ _ _ 31 required require VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 for for ADP IN _ _ _ _ _ 33 cell cell NOUN NN Number=Sing _ _ _ _ 34 survival survival NOUN NN Number=Sing _ _ _ SpaceAfter=No 35 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12936 # text = Document 0030013172 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013172 0030013172 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12937 # text = OBF-1, a novel B cell-specific coactivator that stimulates immunoglobulin promoter activity through association with octamer-binding proteins. 1 OBF Obf ADV RB _ _ _ _ SpaceAfter=No 2 - - PUNCT , _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 4 , , PUNCT , _ _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 novel novel NOUN NN Number=Sing _ _ _ _ 7 B b NOUN NN Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT : _ _ _ _ SpaceAfter=No 10 specific specific ADJ JJ Degree=Pos _ _ _ _ 11 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 12 that that PRON WDT PronType=Rel _ _ _ _ 13 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 15 promoter promoter NOUN NN Number=Sing _ _ _ _ 16 activity activity NOUN NN Number=Sing _ _ _ _ 17 through through ADP IN _ _ _ _ _ 18 association association NOUN NN Number=Sing _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 binding binding VERB VBG VerbForm=Ger _ _ _ _ 23 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12938 # text = Recent biochemical and genetic studies indicate that in addition to the octamer-binding proteins Oct-1 and Oct-2, other B cell components are required for lymphoid-restricted, octamer site-mediated immunoglobulin gene promoter activity. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 3 and and CCONJ CC _ _ _ _ _ 4 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 5 studies study NOUN NNS Number=Plur _ _ _ _ 6 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 7 that that SCONJ IN _ _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 addition addition NOUN NN Number=Sing _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 octamer octamer NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 binding binding VERB VBG VerbForm=Ger _ _ _ _ 15 proteins protein NOUN NNS Number=Plur _ _ _ _ 16 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 18 1 1 NUM CD NumType=Card _ _ _ _ 19 and and CCONJ CC _ _ _ _ _ 20 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 other other ADJ JJ Degree=Pos _ _ _ _ 25 B b ADJ JJ Degree=Pos _ _ _ _ 26 cell cell NOUN NN Number=Sing _ _ _ _ 27 components component NOUN NNS Number=Plur _ _ _ _ 28 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 required require VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 30 for for ADP IN _ _ _ _ _ 31 lymphoid lymphoid VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 restricted restricted VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 34 , , PUNCT , _ _ _ _ _ 35 octamer octamer NOUN NN Number=Sing _ _ _ _ 36 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 38 mediated mediate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 39 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 40 gene gene NOUN NN Number=Sing _ _ _ _ 41 promoter promoter NOUN NN Number=Sing _ _ _ _ 42 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 43 . . PUNCT . _ _ _ _ _ # sent_id = 12939 # text = Using a genetic screen in yeast, we have isolated B cell-derived cDNAs encoding Oct-binding factor 1 (OBF-1), a novel protein that specifically associates with Oct-1 and Oct-2. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 4 screen screen NOUN NN Number=Sing _ _ _ _ 5 in in ADP IN _ _ _ _ _ 6 yeast yeast PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 9 have have AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 isolated isolate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 B b ADJ JJ Degree=Pos _ _ _ _ 12 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 14 derived derive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 cDNAs cDNA NOUN NNS Number=Plur _ _ _ _ 16 encoding encod VERB VBG VerbForm=Ger _ _ _ _ 17 Oct- Oct- PUNCT , _ _ _ _ SpaceAfter=No 18 binding bind VERB VBG VerbForm=Ger _ _ _ _ 19 factor factor NOUN NN Number=Sing _ _ _ _ 20 1 1 NUM CD NumType=Card _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 OBF Obf NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 28 novel novel NOUN NN Number=Sing _ _ _ _ 29 protein protein NOUN NN Number=Sing _ _ _ _ 30 that that PRON WDT PronType=Rel _ _ _ _ 31 specifically specifically ADV RB _ _ _ _ _ 32 associates associate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 33 with with ADP IN _ _ _ _ _ 34 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 35 -1 -1 NUM CD NumType=Card _ _ _ _ 36 and and CCONJ CC _ _ _ _ _ 37 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 38 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 39 2 2 NUM CD NumType=Card _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 12940 # text = Biochemical studies demonstrate that OBF-1 has no intrinsic DNA-binding activity and recognizes the POU domains of Oct-1 and Oct-2, but not those of Oct-4 and Oct-6. 1 Biochemical biochemical ADJ JJ Degree=Pos _ _ _ _ 2 studies study NOUN NNS Number=Plur _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 OBF OBF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - SYM SYM _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 9 no no DET DT _ _ _ _ _ 10 intrinsic intrinsic ADJ JJ Degree=Pos _ _ _ _ 11 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 binding binding NOUN NN Number=Sing _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 recognizes recognize VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 POU pou NOUN NN Number=Sing _ _ _ _ 19 domains domain NOUN NNS Number=Plur _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 -1 -1 NUM CD NumType=Card _ _ _ _ 23 and and CCONJ CC _ _ _ _ _ 24 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 -2 -2 NUM CD NumType=Card _ _ _ SpaceAfter=No 26 , , PUNCT , _ _ _ _ _ 27 but but CCONJ CC _ _ _ _ _ 28 not not ADV RB _ _ _ _ _ 29 those those PRON DT Number=Plur|PronType=Dem _ _ _ _ 30 of of ADP IN _ _ _ _ _ 31 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 32 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 33 4 4 NUM CD NumType=Card _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 Oct Oct PROPN NNP Number=Sing _ _ _ SpaceAfter=No 36 - - SYM SYM _ _ _ _ SpaceAfter=No 37 6 6 NUM CD NumType=Card _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 12941 # text = The OBF-1 mRNA is expressed in a highly cell-specific manner, being most abundant in B cells and essentially absent in most of the other cells or tissues tested. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 OBF Obf NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 1 1 NUM CD NumType=Card _ _ _ _ 5 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 expressed express VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 highly highly ADV RB _ _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 being be AUX VBG VerbForm=Ger _ _ _ _ 17 most most ADV RBS _ _ _ _ _ 18 abundant abundant ADJ JJ Degree=Pos _ _ _ _ 19 in in ADP IN _ _ _ _ _ 20 B b ADJ JJ Degree=Pos _ _ _ _ 21 cells cell NOUN NNS Number=Plur _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 essentially essentially ADV RB _ _ _ _ _ 24 absent absend VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 most most ADJ JJS Degree=Sup _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 other other ADJ JJ Degree=Pos _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 or or CCONJ CC _ _ _ _ _ 32 tissues tissue NOUN NNS Number=Plur _ _ _ _ 33 tested test VERB VBN Tense=Past|VerbForm=Part _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 12942 # text = Furthermore, expression of OBF-1 in HeLa cells selectively stimulates the activity of a natural immunoglobulin promoter in an octamer site-dependent manner. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 expression expression NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 OBF OBF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 1 1 NUM CD NumType=Card _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 HeLa HeLa PROPN NNP Number=Sing _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 selectively selectively ADV RB _ _ _ _ _ 12 stimulates stimulate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 17 natural natural ADJ JJ Degree=Pos _ _ _ _ 18 immunoglobulin immunoglobulin ADJ JJ Degree=Pos _ _ _ _ 19 promoter promoter NOUN NN Number=Sing _ _ _ _ 20 in in ADP IN _ _ _ _ _ 21 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 octamer octamer ADJ JJ Degree=Pos _ _ _ _ 23 site site NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 26 manner manner NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 12943 # text = Thus, OBF-1 has all the properties expected for a B cell-specific transcriptional coactivator protein. 1 Thus thus ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 OBF OBF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT , _ _ _ _ SpaceAfter=No 5 1 1 NUM CD NumType=Card _ _ _ _ 6 has have VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 all all DET PDT _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 properties property NOUN NNS Number=Plur _ _ _ _ 10 expected expect VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 for for ADP IN _ _ _ _ _ 12 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 13 B b PROPN NNP Number=Sing _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 transcriptional transcriptional ADJ JJ Degree=Pos _ _ _ _ 18 coactivator coactivator NOUN NN Number=Sing _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12944 # text = Document 0030013173 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013173 0030013173 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12945 # text = T cells from renal cell carcinoma patients exhibit an abnormal pattern of kappa B-specific DNA-binding activity: a preliminary report. 1 T t ADJ JJ Degree=Pos _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 from from ADP IN _ _ _ _ _ 4 renal renal ADJ JJ Degree=Pos _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 carcinoma carcinoma NOUN NN Number=Sing _ _ _ _ 7 patients patient NOUN NN Number=Sing _ _ _ _ 8 exhibit exhibit VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 abnormal abnormal ADJ JJ Degree=Pos _ _ _ _ 11 pattern pattern NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 specific specific ADJ JJ Degree=Pos _ _ _ _ 17 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 binding binding VERB VBG VerbForm=Ger _ _ _ _ 20 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 : : PUNCT : _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 preliminary preliminary ADJ JJ Degree=Pos _ _ _ _ 24 report report NOUN NN Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12946 # text = Recent data suggest that the poor induction of a T-cell response to human renal cell carcinoma (RCC) may be related to alterations in signal transduction pathways. 1 Recent recent ADJ JJ Degree=Pos _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 poor poor ADJ JJ Degree=Pos _ _ _ _ 7 induction induction NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 response response NOUN NN Number=Sing _ _ _ _ 13 to to ADP IN _ _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 renal renal ADJ JJ Degree=Pos _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 carcinoma carcinoma NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 RCC RCC PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 may may AUX MD VerbForm=Fin _ _ _ _ 22 be be AUX VB VerbForm=Inf _ _ _ _ 23 related related ADJ JJ Degree=Pos _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 alterations alteration NOUN NNS Number=Plur _ _ _ _ 26 in in ADP IN _ _ _ _ _ 27 signal signal ADJ JJ Degree=Pos _ _ _ _ 28 transduction transduction NOUN NN Number=Sing _ _ _ _ 29 pathways pathway NOUN NNS Number=Plur _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 12947 # text = We report that T cells from RCC patients have two alterations in kappa B motif-specific DNA-binding activity. 1 We we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 2 report report VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 3 that that SCONJ IN _ _ _ _ _ 4 T t PROPN NNP Number=Sing _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 from from ADP IN _ _ _ _ _ 7 RCC RCC PROPN NNP Number=Sing _ _ _ _ 8 patients patient NOUN NNS Number=Plur _ _ _ _ 9 have have VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 two two NUM CD NumType=Card _ _ _ _ 11 alterations alteration NOUN NNS Number=Plur _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 kappa kappa NOUN NN Number=Sing _ _ _ _ 14 B b NOUN NN Number=Sing _ _ _ _ 15 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 17 specific specific ADJ JJ Degree=Pos _ _ _ _ 18 DNA dna NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 binding binding VERB VBG VerbForm=Ger _ _ _ _ 21 activity activity NOUN NN Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 12948 # text = The first alteration involves the constitutive expression of substantial kappa B-binding activity in nuclear extracts, which was observed in the electrophoretic mobility shift assay. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 first first ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 alteration alteration NOUN NN Number=Sing _ _ _ _ 4 involves involve VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 constitutive constitutive ADJ JJ Degree=Pos _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 substantial substantial ADJ JJ Degree=Pos _ _ _ _ 10 kappa kappa NOUN NN Number=Sing _ _ _ _ 11 B- B- SYM SYM _ _ _ _ SpaceAfter=No 12 binding bind VERB VBG VerbForm=Ger _ _ _ _ 13 activity activity NOUN NN Number=Sing _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 16 extracts extract NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 , , PUNCT , _ _ _ _ _ 18 which which PRON WDT PronType=Rel _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 electrophoretic electrophoretic ADJ JJ Degree=Pos _ _ _ _ 24 mobility mobility NOUN NN Number=Sing _ _ _ _ 25 shift shift NOUN NN Number=Sing _ _ _ _ 26 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 12949 # text = The magnitude of kappa B activity in unstimulated patient T cells was similar to that observed in T cells from normal individuals that had been activated in vitro. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 magnitude magnitude NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 kappa kappa NOUN NN Number=Sing _ _ _ _ 5 B b NOUN NN Number=Sing _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 9 patient patient ADJ JJ Degree=Pos _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 similar similar ADJ JJ Degree=Pos _ _ _ _ 14 to to ADP IN _ _ _ _ _ 15 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 16 observed observe VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 from from ADP IN _ _ _ _ _ 21 normal normal ADJ JJ Degree=Pos _ _ _ _ 22 individuals individual NOUN NNS Number=Plur _ _ _ _ 23 that that PRON WDT PronType=Rel _ _ _ _ 24 had have AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 25 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 26 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 27 in in ADP IN _ _ _ _ _ 28 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 12950 # text = On the basis of Western blotting experiments using antibodies to kappa 1 On on ADP IN _ _ _ _ _ 2 the the DET DT Definite=Def|PronType=Art _ _ _ _ 3 basis basis NOUN NN Number=Sing _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 Western western ADJ JJ Degree=Pos _ _ _ _ 6 blotting blotting NOUN NN Number=Sing _ _ _ _ 7 experiments experiment NOUN NNS Number=Plur _ _ _ _ 8 using use VERB VBG VerbForm=Ger _ _ _ _ 9 antibodies antibody NOUN NNS Number=Plur _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 kappa kappa PROPN NNP Number=Sing _ _ _ _ # sent_id = 12951 # text = B/Rel family proteins, the kappa B-binding activity constitutively expressed in T cells from RCC patients is composed mostly of the NF-kappa B1 (p50) subunit. 1 B benefit ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 2 / / PUNCT , _ _ _ _ SpaceAfter=No 3 Rel Rel ADJ JJ Degree=Pos _ _ _ _ 4 family family NOUN NN Number=Sing _ _ _ _ 5 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 the the DET DT Definite=Def|PronType=Art _ _ _ _ 8 kappa kappa NOUN NN Number=Sing _ _ _ _ 9 B b NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 binding bind VERB VBG VerbForm=Ger _ _ _ _ 12 activity activity NOUN NN Number=Sing _ _ _ _ 13 constitutively constitutively ADV RB _ _ _ _ _ 14 expressed express VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 T t PROPN NNP Number=Sing _ _ _ _ 17 cells cell NOUN NNS Number=Plur _ _ _ _ 18 from from ADP IN _ _ _ _ _ 19 RCC RCC PROPN NNP Number=Sing _ _ _ _ 20 patients patient NOUN NNS Number=Plur _ _ _ _ 21 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 22 composed compose VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 23 mostly mostly ADV RB _ _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 27 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 28 kappa kappa PROPN NNP Number=Sing _ _ _ _ 29 B1 B1 PROPN NNP Number=Sing _ _ _ _ 30 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 31 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 32 ) ) PUNCT -RRB- _ _ _ _ _ 33 subunit subunit NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 12952 # text = The second abnormality in kappa B-binding activity in T cells from these patients is that RelA, a member of the Rel homology family which is part of the normal NF-kappa B complex, was not induced in the nucleus following activation. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 second second ADJ JJ Degree=Pos|NumType=Ord _ _ _ _ 3 abnormality abnormality NOUN NN Number=Sing _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 kappa kappa NOUN NN Number=Sing _ _ _ _ 6 B- B- PUNCT , _ _ _ _ SpaceAfter=No 7 binding bind VERB VBG VerbForm=Ger _ _ _ _ 8 activity activity NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cells cell NOUN NNS Number=Plur _ _ _ _ 12 from from ADP IN _ _ _ _ _ 13 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 14 patients patient NOUN NN Number=Sing _ _ _ _ 15 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 16 that that ADP IN Typo=Yes _ _ _ _ 17 RelA RelA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 20 member member NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 Rel Rel PROPN NNP Number=Sing _ _ _ _ 24 homology homology NOUN NN Number=Sing _ _ _ _ 25 family family NOUN NN Number=Sing _ _ _ _ 26 which which PRON WDT PronType=Rel _ _ _ _ 27 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 28 part part NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 normal normal ADJ JJ Degree=Pos _ _ _ _ 32 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 kappa kappa NOUN NN Number=Sing _ _ _ _ 35 B b NOUN NN Number=Sing _ _ _ _ 36 complex complex NOUN NN Number=Sing _ _ _ SpaceAfter=No 37 , , PUNCT , _ _ _ _ _ 38 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 39 not not PART RB _ _ _ _ _ 40 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 41 in in ADP IN _ _ _ _ _ 42 the the DET DT Definite=Def|PronType=Art _ _ _ _ 43 nucleus nucleus NOUN NN Number=Sing _ _ _ _ 44 following follow VERB VBG VerbForm=Ger _ _ _ _ 45 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 46 . . PUNCT . _ _ _ _ _ # sent_id = 12953 # text = Western blotting analysis did not detect any RelA in nuclear extracts either before or after stimulation of T cells. 1 Western western ADJ JJ Degree=Pos _ _ _ _ 2 blotting blotting NOUN NN Number=Sing _ _ _ _ 3 analysis analysis NOUN NN Number=Sing _ _ _ _ 4 did do AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 5 not not PART RB _ _ _ _ _ 6 detect detect VERB VB VerbForm=Inf _ _ _ _ 7 any any DET DT _ _ _ _ _ 8 RelA Rela NOUN NN Number=Sing _ _ _ _ 9 in in ADP IN _ _ _ _ _ 10 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 11 extracts extract NOUN NNS Number=Plur _ _ _ _ 12 either either CCONJ CC _ _ _ _ _ 13 before before ADV RB _ _ _ _ _ 14 or or CCONJ CC _ _ _ _ _ 15 after after ADP IN _ _ _ _ _ 16 stimulation stimulation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 T t PROPN NNP Number=Sing _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 12954 # text = The altered kappa B-binding activity in T cells from RCC patients may impair their capacity to respond normally to various stimuli. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 altered alter VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 3 kappa kappa NOUN NN Number=Sing _ _ _ _ 4 B- B- PUNCT , _ _ _ _ SpaceAfter=No 5 binding bind VERB VBG VerbForm=Ger _ _ _ _ 6 activity activity NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 T t PROPN NNP Number=Sing _ _ _ _ 9 cells cell NOUN NNS Number=Plur _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 RCC RCC PROPN NNP Number=Sing _ _ _ _ 12 patients patient NOUN NNS Number=Plur _ _ _ _ 13 may may AUX MD VerbForm=Fin _ _ _ _ 14 impair impair VERB VB VerbForm=Inf _ _ _ _ 15 their they PRON PRP$ Number=Plur|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 16 capacity capacity NOUN NN Number=Sing _ _ _ _ 17 to to PART TO _ _ _ _ _ 18 respond respond VERB VB VerbForm=Inf _ _ _ _ 19 normally normally ADV RB _ _ _ _ _ 20 to to ADP IN _ _ _ _ _ 21 various various ADJ JJ Degree=Pos _ _ _ _ 22 stimuli stimuli NOUN NNS Number=Plur _ _ _ SpaceAfter=No 23 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12955 # text = Document 0030013180 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013180 0030013180 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12956 # text = Resistance to tumor necrosis factor induced apoptosis in vitro correlates with high metastatic capacity of cells in vivo. 1 Resistance resistance NOUN NN Number=Sing _ _ _ _ 2 to to ADP IN _ _ _ _ _ 3 tumor tumor NOUN NN Number=Sing _ _ _ _ 4 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ _ 6 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 10 correlates correlate NOUN NNS Number=Plur _ _ _ _ 11 with with ADP IN _ _ _ _ _ 12 high high ADJ JJ Degree=Pos _ _ _ _ 13 metastatic metastatic ADJ JJ Degree=Pos _ _ _ _ 14 capacity capacity NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 in in ADP IN _ _ _ _ _ 18 vivo vivo NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12957 # text = TNF is one of the cytokines secreted by the cells of the immune system. 1 TNF TNF PRON PRP Case=Acc|Number=Sing|Person=1|PronType=Prs|Reflex=Yes _ _ _ _ 2 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 one one NUM CD NumType=Card _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 7 secreted secret VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 cells cell NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 immune immune ADJ JJ Degree=Pos _ _ _ _ 14 system system NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 12958 # text = Our data demonstrate that those cell lines lacking capability to form metastatic tumors in vivo are susceptible to TNF induced apoptosis in vitro. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 demonstrate demonstrate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 those those DET DT Number=Plur|PronType=Dem _ _ _ _ 6 cell cell NOUN NN Number=Sing _ _ _ _ 7 lines line NOUN NNS Number=Plur _ _ _ _ 8 lacking lack VERB VBG VerbForm=Ger _ _ _ _ 9 capability capability NOUN NN Number=Sing _ _ _ _ 10 to to PART TO _ _ _ _ _ 11 form form VERB VB VerbForm=Inf _ _ _ _ 12 metastatic metastatic ADJ JJ Degree=Pos _ _ _ _ 13 tumors tumor NOUN NNS Number=Plur _ _ _ _ 14 in in ADP IN _ _ _ _ _ 15 vivo vivo NOUN NN Number=Sing _ _ _ _ 16 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 17 susceptible susceptible ADJ JJ Degree=Pos _ _ _ _ 18 to to PART TO _ _ _ _ _ 19 TNF TNF AUX VB VerbForm=Inf _ _ _ _ 20 induced induce VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 apoptosis apoptosis NOUN NN Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ _ # sent_id = 12959 # text = However, cell lines with high metastatic potential are resistant to TNF in vitro. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 cell cell VERB VB Mood=Imp|VerbForm=Fin _ _ _ _ 4 lines line NOUN NNS Number=Plur _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 high high ADJ JJ Degree=Pos _ _ _ _ 7 metastatic metastatic ADJ JJ Degree=Pos _ _ _ _ 8 potential potential NOUN NN Number=Sing _ _ _ _ 9 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 10 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 11 to to PART TO _ _ _ _ _ 12 TNF TNF VERB VB VerbForm=Inf _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 vitro vitro NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 12960 # text = Furthermore, the same cell lines were resistant to cytolytic action of other cytotoxic proteins secreted by LAK cells. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 same same ADJ JJ Degree=Pos _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 lines line NOUN NNS Number=Plur _ _ _ _ 7 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 resistant resistant ADJ JJ Degree=Pos _ _ _ _ 9 to to ADP IN _ _ _ _ _ 10 cytolytic cytolytic ADJ JJ Degree=Pos _ _ _ _ 11 action action NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 other other ADJ JJ Degree=Pos _ _ _ _ 14 cytotoxic cytotoxic ADJ JJ Degree=Pos _ _ _ _ 15 proteins protein NOUN NNS Number=Plur _ _ _ _ 16 secreted secret VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 by by ADP IN _ _ _ _ _ 18 LAK Lak ADJ JJ Degree=Pos _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 12961 # text = Our data showed that TNF resistance in vitro correlates with the increased level of transcription factor NF-kappaB. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 data data NOUN NN Number=Sing _ _ _ _ 3 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 TNF TNF PROPN NNP Number=Sing _ _ _ _ 6 resistance resistance NOUN NN Number=Sing _ _ _ _ 7 in in ADP IN _ _ _ _ _ 8 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 9 correlates correlate NOUN NNS Number=Plur _ _ _ _ 10 with with ADP IN _ _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 increased increase VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 level level NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 transcription transcription NOUN NN Number=Sing _ _ _ _ 16 factor factor NOUN NN Number=Sing _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 12962 # text = This finding may provide a tool to improve current protocols of immunotherapy and insights to how tumor cells are or are not killed by LAK cells. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 finding finding NOUN NN Number=Sing _ _ _ _ 3 may may AUX MD VerbForm=Fin _ _ _ _ 4 provide provide VERB VB VerbForm=Inf _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 tool tool NOUN NN Number=Sing _ _ _ _ 7 to to PART TO _ _ _ _ _ 8 improve improve VERB VB VerbForm=Inf _ _ _ _ 9 current current ADJ JJ Degree=Pos _ _ _ _ 10 protocols protocol NOUN NNS Number=Plur _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 immunotherapy immunotherapy NOUN NN Number=Sing _ _ _ _ 13 and and CCONJ CC _ _ _ _ _ 14 insights insight NOUN NNS Number=Plur _ _ _ _ 15 to to ADP IN _ _ _ _ _ 16 how how ADV WRB PronType=Int _ _ _ _ 17 tumor tumor ADJ JJ Degree=Pos _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ _ 19 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 20 or or CCONJ CC _ _ _ _ _ 21 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 22 not not PART RB _ _ _ _ _ 23 killed kill VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 24 by by ADP IN _ _ _ _ _ 25 LAK Lak ADJ JJ Degree=Pos _ _ _ _ 26 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12963 # text = Document 0030013182 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013182 0030013182 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12964 # text = Evidence for a trans-acting activator function regulating the expression of the human CD5 antigen. 1 Evidence evidence NOUN NN Number=Sing _ _ _ _ 2 for for ADP IN _ _ _ _ _ 3 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 4 trans trans NOUN NN Number=Sing _ _ _ SpaceAfter=No 5 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 6 acting act VERB VBG VerbForm=Ger _ _ _ _ 7 activator activator NOUN NN Number=Sing _ _ _ _ 8 function function NOUN NN Number=Sing _ _ _ _ 9 regulating regulate VERB VBG VerbForm=Ger _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 human human ADJ JJ Degree=Pos _ _ _ _ 15 CD5 Cd5 NOUN NN Number=Sing _ _ _ _ 16 antigen antigen NOUN NNS Number=Plur _ _ _ SpaceAfter=No 17 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12965 # text = Interspecies somatic cell hybrids were generated by fusing the mouse T-lymphoma cell line, BW5147, with normal human T lymphocytes at different stages of differentiation. 1 Interspecies Interspecy NOUN NNS Number=Plur _ _ _ _ 2 somatic somatic ADJ JJ Degree=Pos _ _ _ _ 3 cell cell NOUN NN Number=Sing _ _ _ _ 4 hybrids hybrid NOUN NNS Number=Plur _ _ _ _ 5 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 6 generated generate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 7 by by SCONJ IN _ _ _ _ _ 8 fusing fuse VERB VBG VerbForm=Ger _ _ _ _ 9 the the DET DT Definite=Def|PronType=Art _ _ _ _ 10 mouse mouse NOUN NN Number=Sing _ _ _ _ 11 T- T- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 lymphoma lymphoma NOUN NN Number=Sing _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 line line NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 BW BW PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 5147 5147 NUM CD NumType=Card _ _ _ SpaceAfter=No 18 , , PUNCT , _ _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 normal normal ADJ JJ Degree=Pos _ _ _ _ 21 human human ADJ JJ Degree=Pos _ _ _ _ 22 T t NOUN NN Number=Sing _ _ _ _ 23 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 24 at at ADP IN _ _ _ _ _ 25 different different ADJ JJ Degree=Pos _ _ _ _ 26 stages stage NOUN NNS Number=Plur _ _ _ _ 27 of of ADP IN _ _ _ _ _ 28 differentiation differentiation NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 . . PUNCT . _ _ _ _ _ # sent_id = 12966 # text = Thymocytes, activated peripheral T lymphocytes, or an activated T-cell clone were used as human partners, respectively, in three independent fusions. 1 Thymocytes Thymocytes INTJ UH _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 activated activate VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 5 T t NOUN NN Number=Sing _ _ _ _ 6 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 activated activated VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 11 T- t- NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 cell cell NOUN NN Number=Sing _ _ _ _ 13 clone clone NOUN NN Number=Sing _ _ _ _ 14 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 15 used use VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 16 as as ADP IN _ _ _ _ _ 17 human human ADJ JJ Degree=Pos _ _ _ _ 18 partners partner NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 respectively respectively ADV RB _ _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 three three NUM CD NumType=Card _ _ _ _ 24 independent independent ADJ JJ Degree=Pos _ _ _ _ 25 fusions fusion NOUN NNS Number=Plur _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 12967 # text = Irrespective of the human cell partner used for fusion, a certain number of hybrids lost CD5 surface expression over a period of time in culture. 1 Irrespective irrespective ADJ JJ Degree=Pos _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 human human ADJ JJ Degree=Pos _ _ _ _ 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 partner partner NOUN NN Number=Sing _ _ _ _ 7 used use VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 8 for for ADP IN _ _ _ _ _ 9 fusion fusion NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 certain certain ADJ JJ Degree=Pos _ _ _ _ 13 number number NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 hybrids hybrid NOUN NNS Number=Plur _ _ _ _ 16 lost lose VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 CD5 CD5 NUM CD NumType=Card _ _ _ _ 18 surface surface NOUN NN Number=Sing _ _ _ _ 19 expression expression NOUN NN Number=Sing _ _ _ _ 20 over over ADP IN _ _ _ _ _ 21 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 22 period period NOUN NN Number=Sing _ _ _ _ 23 of of ADP IN _ _ _ _ _ 24 time time NOUN NN Number=Sing _ _ _ _ 25 in in ADP IN _ _ _ _ _ 26 culture culture NOUN NN Number=Sing _ _ _ SpaceAfter=No 27 . . PUNCT . _ _ _ _ _ # sent_id = 12968 # text = Analysis at the phenotype and genetic level showed that lack of CD5 expression was due neither to segregation of human autosome 11, on which the CD5 gene has been mapped, nor to deletion of the CD5 structural gene. 1 Analysis Analysis NOUN NN Number=Sing _ _ _ _ 2 at at ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 phenotype phenotype NOUN NN Number=Sing _ _ _ _ 5 and and CCONJ CC _ _ _ _ _ 6 genetic genetic ADJ JJ Degree=Pos _ _ _ _ 7 level level NOUN NN Number=Sing _ _ _ _ 8 showed show VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 9 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 10 lack lack NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 CD5 CD5 NUM CD NumType=Card _ _ _ _ 13 expression expression NOUN NN Number=Sing _ _ _ _ 14 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 15 due due ADP IN _ _ _ _ _ 16 neither neither CCONJ CC _ _ _ _ _ 17 to to ADP IN _ _ _ _ _ 18 segregation segregation NOUN NN Number=Sing _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 human human ADJ JJ Degree=Pos _ _ _ _ 21 autosome autosome NOUN NN Number=Sing _ _ _ _ 22 11 11 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 , , PUNCT , _ _ _ _ _ 24 on on ADP IN _ _ _ _ _ 25 which which PRON WDT PronType=Rel _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 CD5 Cd5 NOUN NN Number=Sing _ _ _ _ 28 gene gene NOUN NN Number=Sing _ _ _ _ 29 has have AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 30 been be AUX VBN Tense=Past|VerbForm=Part _ _ _ _ 31 mapped map VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 32 , , PUNCT , _ _ _ _ _ 33 nor nor CCONJ CC _ _ _ _ _ 34 to to ADP IN _ _ _ _ _ 35 deletion deletion NOUN NN Number=Sing _ _ _ _ 36 of of ADP IN _ _ _ _ _ 37 the the DET DT Definite=Def|PronType=Art _ _ _ _ 38 CD5 CD5 PROPN NNP Number=Sing _ _ _ _ 39 structural structural ADJ JJ Degree=Pos _ _ _ _ 40 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 12969 # text = Furthermore, loss of CD5 surface expression correlated with the absence of specific mRNA. 1 Furthermore furthermore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 loss loss ADP IN _ _ _ _ _ 4 of of ADP IN _ _ _ _ _ 5 CD5 CD5 NUM CD NumType=Card _ _ _ _ 6 surface surface NOUN NN Number=Sing _ _ _ _ 7 expression expression NOUN NN Number=Sing _ _ _ _ 8 correlated correlate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 with with ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 absence absence NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 specific specific ADJ JJ Degree=Pos _ _ _ _ 14 mRNA mRNA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 12970 # text = Since these hybrids preferentially segregate human chromosomes, these results indicate the existence of a non-syntenic trans-active locus, or loci, positively controlling the expression of the human CD5 gene. 1 Since since SCONJ IN _ _ _ _ _ 2 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 3 hybrids hybrid NOUN NNS Number=Plur _ _ _ _ 4 preferentially preferentially ADV RB _ _ _ _ _ 5 segregate segregate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 6 human human ADJ JJ Degree=Pos _ _ _ _ 7 chromosomes chromosome NOUN NNS Number=Plur _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 these these DET DT Number=Plur|PronType=Dem _ _ _ _ 10 results result NOUN NNS Number=Plur _ _ _ _ 11 indicate indicate VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 existence existence NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 16 non-syntenic non-syntenic ADJ JJ Degree=Pos _ _ _ _ 17 trans tran NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 - - PUNCT , _ _ _ _ SpaceAfter=No 19 active active ADJ JJ Degree=Pos _ _ _ _ 20 locus locus NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 , , PUNCT , _ _ _ _ _ 22 or or CCONJ CC _ _ _ _ _ 23 loci loci NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 positively positively ADV RB _ _ _ _ _ 26 controlling control VERB VBG VerbForm=Ger _ _ _ _ 27 the the DET DT Definite=Def|PronType=Art _ _ _ _ 28 expression expression NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 the the DET DT Definite=Def|PronType=Art _ _ _ _ 31 human human ADJ JJ Degree=Pos _ _ _ _ 32 CD5 Cd5 NOUN NN Number=Sing _ _ _ _ 33 gene gene NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12971 # text = Document 0030013186 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013186 0030013186 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12972 # text = Suppression by azelastine hydrochloride of NF-kappa B activation involved in generation of cytokines and nitric oxide. 1 Suppression Suppression NOUN NN Number=Sing _ _ _ _ 2 by by ADP IN _ _ _ _ _ 3 azelastine azelastine ADJ JJ Degree=Pos _ _ _ _ 4 hydrochloride hydrochloride NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 8 kappa kappa PROPN NNP Number=Sing _ _ _ _ 9 B b PROPN NNP Number=Sing _ _ _ _ 10 activation activation NOUN NN Number=Sing _ _ _ _ 11 involved involve VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 12 in in ADP IN _ _ _ _ _ 13 generation generation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 nitric nitric ADJ JJ Degree=Pos _ _ _ _ 18 oxide oxide NOUN NN Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12973 # text = The influence of the anti-allergy agent azelastine hydrochloride (Azeptin) on NF-kappa B activation associated with the generation of cytokines and nitric oxide (NO) was investigated in various kinds of human and mouse cells. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 influence influence NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 anti-allergy anti-allergy ADJ JJ Degree=Pos _ _ _ _ 6 agent agent NOUN NN Number=Sing _ _ _ _ 7 azelastine azelastine NOUN NN Number=Sing _ _ _ _ 8 hydrochloride hydrochloride NOUN NN Number=Sing _ _ _ _ 9 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 10 Azeptin Azeptin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 11 ) ) PUNCT -RRB- _ _ _ _ _ 12 on on ADP IN _ _ _ _ _ 13 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 kappa kappa PROPN NNP Number=Sing _ _ _ _ 16 B b PROPN NNP Number=Sing _ _ _ _ 17 activation activation NOUN NN Number=Sing _ _ _ _ 18 associated associate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 19 with with ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 generation generation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 nitric nitric ADJ JJ Degree=Pos _ _ _ _ 26 oxide oxide NOUN NN Number=Sing _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 NO no INTJ UH _ _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 31 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 32 in in ADP IN _ _ _ _ _ 33 various various ADJ JJ Degree=Pos _ _ _ _ 34 kinds kind NOUN NNS Number=Plur _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 human human NOUN NN Number=Sing _ _ _ _ 37 and and CCONJ CC _ _ _ _ _ 38 mouse mouse NOUN NN Number=Sing _ _ _ _ 39 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 40 . . PUNCT . _ _ _ _ _ # sent_id = 12974 # text = Azeptin dose-dependently suppressed both DNA and protein synthesis in human gingival fibroblasts (HF) and also suppressed blastogenesis of human peripheral blood lymphocytes (PBL). 1 Azeptin Azeptin PROPN NNP Number=Sing _ _ _ _ 2 dose dose NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 - - PUNCT , _ _ _ _ SpaceAfter=No 4 dependently dependently ADV RB _ _ _ _ _ 5 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 both both CCONJ CC _ _ _ _ _ 7 DNA dna NOUN NN Number=Sing _ _ _ _ 8 and and CCONJ CC _ _ _ _ _ 9 protein protein NOUN NN Number=Sing _ _ _ _ 10 synthesis synthesis NOUN NN Number=Sing _ _ _ _ 11 in in ADP IN _ _ _ _ _ 12 human human ADJ JJ Degree=Pos _ _ _ _ 13 gingival gingival NOUN NN Number=Sing _ _ _ _ 14 fibroblasts fibroblast NOUN NNS Number=Plur _ _ _ _ 15 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 HF HF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 and and CCONJ CC _ _ _ _ _ 19 also also ADV RB _ _ _ _ _ 20 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 21 blastogenesis blastogenesis NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 human human ADJ JJ Degree=Pos _ _ _ _ 24 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 25 blood blood NOUN NN Number=Sing _ _ _ _ 26 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 27 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 28 PBL PBL NOUN NN Number=Sing _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 12975 # text = Generation of tumor necrosis factor-alpha, interleukin 1-beta, granulocyte-macrophage colony-stimulating factor and interleukin-6 from 10(-5) M Azeptin-treated PBL and human monocytes (HM) was decreased to approximately 1/3 to 2/3 of the control levels. 1 Generation generation NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 tumor tumor NOUN NN Number=Sing _ _ _ _ 4 necrosis necrosis NOUN NN Number=Sing _ _ _ _ 5 factor factor NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 7 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 interleukin interleukin NOUN NN Number=Sing _ _ _ _ 10 1 1 NUM CD NumType=Card _ _ _ SpaceAfter=No 11 - - PUNCT : _ _ _ _ SpaceAfter=No 12 beta beta NOUN NN Number=Sing _ _ _ SpaceAfter=No 13 , , PUNCT , _ _ _ _ _ 14 granulocyte granulocyte NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 macrophage macrophage NOUN NN Number=Sing _ _ _ _ 17 colony colony NOUN NN Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 stimulating stimulate VERB VBG VerbForm=Ger _ _ _ _ 20 factor factor NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 interleukin interleukin NOUN NN Number=Sing _ _ _ SpaceAfter=No 23 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 24 6 6 NUM CD NumType=Card _ _ _ _ 25 from from ADP IN _ _ _ _ _ 26 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 27 (- (- PUNCT . _ _ _ _ SpaceAfter=No 28 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 29 ) ) PUNCT -RRB- _ _ _ _ _ 30 M m NOUN NN Number=Sing _ _ _ _ 31 Azeptin- Azeptin- PUNCT : _ _ _ _ SpaceAfter=No 32 treated treat VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 PBL pBl PROPN NNP Number=Sing _ _ _ _ 34 and and CCONJ CC _ _ _ _ _ 35 human human ADJ JJ Degree=Pos _ _ _ _ 36 monocytes monocyte NOUN NNS Number=Plur _ _ _ _ 37 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 38 HM HM PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 ) ) PUNCT -RRB- _ _ _ _ _ 40 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 41 decreased decrease VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 42 to to ADP IN _ _ _ _ _ 43 approximately approximately ADV RB _ _ _ _ _ 44 1/3 1/3 NUM CD NumType=Card _ _ _ _ 45 to to ADP IN _ _ _ _ _ 46 2/3 2/3 NUM CD NumType=Card _ _ _ _ 47 of of ADP IN _ _ _ _ _ 48 the the DET DT Definite=Def|PronType=Art _ _ _ _ 49 control control NOUN NN Number=Sing _ _ _ _ 50 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 51 . . PUNCT . _ _ _ _ _ # sent_id = 12976 # text = In parallel with the decreased cytokine generation, each cytokine mRNA was less expressed in the presence of 10(-5) M Azeptin. 1 In in ADP IN _ _ _ _ _ 2 parallel parallel NOUN NN Number=Sing _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 the the DET DT Definite=Def|PronType=Art _ _ _ _ 5 decreased decrease VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 6 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 7 generation generation NOUN NN Number=Sing _ _ _ SpaceAfter=No 8 , , PUNCT , _ _ _ _ _ 9 each each DET DT _ _ _ _ _ 10 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 11 mRNA mRNA PROPN NNP Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 less less ADV RBR Degree=Cmp _ _ _ _ 14 expressed expressed ADJ JJ Degree=Pos _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 presence presence NOUN NN Number=Sing _ _ _ _ 18 of of ADP IN _ _ _ _ _ 19 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 (- (- PUNCT . _ _ _ _ SpaceAfter=No 21 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 M be NOUN NN Number=Sing _ _ _ _ 24 Azeptin Azeptin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 25 . . PUNCT . _ _ _ _ _ # sent_id = 12977 # text = In addition, both inducible nitric oxide synthase-mRNA level and NO generation in mouse peritoneal macrophages were suppressed by 10(-5) M Azeptin. 1 In in ADP IN _ _ _ _ _ 2 addition addition NOUN NN Number=Sing _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 both both CCONJ CC _ _ _ _ _ 5 inducible inducible ADJ JJ Degree=Pos _ _ _ _ 6 nitric nitric ADJ JJ Degree=Pos _ _ _ _ 7 oxide oxide NOUN NN Number=Sing _ _ _ _ 8 synthase synthase NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 mRNA mRNa NOUN NN Number=Sing _ _ _ _ 11 level level NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 NO no DET DT _ _ _ _ _ 14 generation generation NOUN NN Number=Sing _ _ _ _ 15 in in ADP IN _ _ _ _ _ 16 mouse mouse NOUN NN Number=Sing _ _ _ _ 17 peritoneal peritoneal ADJ JJ Degree=Pos _ _ _ _ 18 macrophages macrophage NOUN NNS Number=Plur _ _ _ _ 19 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 20 suppressed suppress VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 by by ADP IN _ _ _ _ _ 22 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 (- (- PUNCT . _ _ _ _ SpaceAfter=No 24 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 M be NOUN NN Number=Sing _ _ _ _ 27 Azeptin Azeptin PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 12978 # text = Being compatible with those results, Azeptin (10(-5) M) suppressed activation of NF-kappa B in PBL, HM and HF. 1 Being be AUX VBG VerbForm=Ger _ _ _ _ 2 compatible compatible ADJ JJ Degree=Pos _ _ _ _ 3 with with ADP IN _ _ _ _ _ 4 those those DET DT Number=Plur|PronType=Dem _ _ _ _ 5 results result NOUN NNS Number=Plur _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 Azeptin Azeptin PROPN NNP Number=Sing _ _ _ _ 8 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 9 10 10 NUM CD NumType=Card _ _ _ SpaceAfter=No 10 (- (- PUNCT . _ _ _ _ SpaceAfter=No 11 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 12 ) ) PUNCT -RRB- _ _ _ _ _ 13 M m NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 ) ) PUNCT -RRB- _ _ _ _ _ 15 suppressed suppress VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 activation activation NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa PROPN NNP Number=Sing _ _ _ _ 21 B b PROPN NNP Number=Sing _ _ _ _ 22 in in ADP IN _ _ _ _ _ 23 PBL PBL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 HM HM PROPN NNP Number=Sing _ _ _ _ 26 and and CCONJ CC _ _ _ _ _ 27 HF HF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 12979 # text = These results appear to indicate that suppression of cytokine and NO generation by Azeptin results at least partially from the inhibition of NF-kappa B activation. 1 These these DET DT Number=Plur|PronType=Dem _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 appear appear VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 to to PART TO _ _ _ _ _ 5 indicate indicate VERB VB VerbForm=Inf _ _ _ _ 6 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 7 suppression suppression NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 10 and and CCONJ CC _ _ _ _ _ 11 NO no DET DT _ _ _ _ _ 12 generation generation NOUN NN Number=Sing _ _ _ _ 13 by by ADP IN _ _ _ _ _ 14 Azeptin Azeptin PROPN NNP Number=Sing _ _ _ _ 15 results result NOUN NNS Number=Plur _ _ _ _ 16 at at ADV RB _ _ _ _ _ 17 least least ADV RBS Degree=Sup _ _ _ _ 18 partially partially ADV RB _ _ _ _ _ 19 from from ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 kappa kappa NOUN NN Number=Sing _ _ _ _ 26 B b NOUN NN Number=Sing _ _ _ _ 27 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12980 # text = Document 0030013190 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013190 0030013190 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12981 # text = Affinity-driven peptide selection of an NFAT inhibitor more selective than cyclosporin A [see comments] 1 Affinity affinity NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 driven drive VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 peptide peptide NOUN NN Number=Sing _ _ _ _ 5 selection selection NOUN NN Number=Sing _ _ _ _ 6 of of ADP IN _ _ _ _ _ 7 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 8 NFAT Nfat PROPN NNP Number=Sing _ _ _ _ 9 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 10 more more ADV RBR _ _ _ _ _ 11 selective selective ADJ JJ Degree=Pos _ _ _ _ 12 than than ADP IN _ _ _ _ _ 13 cyclosporin cyclosporin NOUN NN Number=Sing _ _ _ _ 14 A a PROPN NNP Number=Sing _ _ _ _ 15 [ [ PUNCT -LRB- _ _ _ _ SpaceAfter=No 16 see see VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 17 comments comment NOUN NNS Number=Plur _ _ _ SpaceAfter=No 18 ] ] PUNCT -RRB- _ _ _ _ SpacesAfter=\s\n # sent_id = 12982 # text = The flow of information from calcium-mobilizing receptors to nuclear factor of activated T cells (NFAT)-dependent genes is critically dependent on interaction between the phosphatase calcineurin and the transcription factor NFAT. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 flow flow NOUN NN Number=Sing _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 information information NOUN NN Number=Sing _ _ _ _ 5 from from ADP IN _ _ _ _ _ 6 calcium calcium NOUN NN Number=Sing _ _ _ SpaceAfter=No 7 - - PUNCT , _ _ _ _ SpaceAfter=No 8 mobilizing mobilize VERB VBG VerbForm=Ger _ _ _ _ 9 receptors receptor NOUN NNS Number=Plur _ _ _ _ 10 to to ADP IN _ _ _ _ _ 11 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 12 factor factor NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 activated activate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 T t PROPN NNP Number=Sing _ _ _ _ 16 cells cell NOUN NNS Number=Plur _ _ _ _ 17 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 18 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 22 genes gene NOUN NNS Number=Plur _ _ _ _ 23 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 24 critically critically ADV RB _ _ _ _ _ 25 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 26 on on ADP IN _ _ _ _ _ 27 interaction interaction NOUN NN Number=Sing _ _ _ _ 28 between between ADP IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 31 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 32 and and CCONJ CC _ _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 transcription transcription NOUN NN Number=Sing _ _ _ _ 35 factor factor NOUN NN Number=Sing _ _ _ _ 36 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 12983 # text = A high-affinity calcineurin-binding peptide was selected from combinatorial peptide libraries based on the calcineurin docking motif of NFAT. 1 A a DET DT Definite=Ind|PronType=Art _ _ _ _ 2 high high ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 4 affinity affinity NOUN NN Number=Sing _ _ _ _ 5 calcineurin- calcineurin- PUNCT : _ _ _ _ SpaceAfter=No 6 binding bind VERB VBG VerbForm=Ger _ _ _ _ 7 peptide peptide NOUN NN Number=Sing _ _ _ _ 8 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 9 selected select VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 10 from from ADP IN _ _ _ _ _ 11 combinatorial combinatorial ADJ JJ Degree=Pos _ _ _ _ 12 peptide peptide NOUN NN Number=Sing _ _ _ _ 13 libraries library NOUN NNS Number=Plur _ _ _ _ 14 based base VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 15 on on ADP IN _ _ _ _ _ 16 the the DET DT Definite=Def|PronType=Art _ _ _ _ 17 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 18 docking docke VERB VBG VerbForm=Ger _ _ _ _ 19 motif motif NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 . . PUNCT . _ _ _ _ _ # sent_id = 12984 # text = This peptide potently inhibited NFAT activation and NFAT-dependent expression of endogenous cytokine genes in T cells, without affecting the expression of other cytokines that require calcineurin but not NFAT. 1 This this DET DT Number=Sing|PronType=Dem _ _ _ _ 2 peptide peptide NOUN NN Number=Sing _ _ _ _ 3 potently potently ADV RB _ _ _ _ _ 4 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 5 NFAT NFAT ADJ JJ Degree=Pos _ _ _ _ 6 activation activation NOUN NN Number=Sing _ _ _ _ 7 and and CCONJ CC _ _ _ _ _ 8 NFAT Nfat NOUN NN Number=Sing _ _ _ SpaceAfter=No 9 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 10 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 11 expression expression NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 endogenous endogenous ADJ JJ Degree=Pos _ _ _ _ 14 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 15 genes gene NOUN NNS Number=Plur _ _ _ _ 16 in in ADP IN _ _ _ _ _ 17 T t PROPN NNP Number=Sing _ _ _ _ 18 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 , , PUNCT , _ _ _ _ _ 20 without without SCONJ IN _ _ _ _ _ 21 affecting affecte VERB VBG VerbForm=Ger _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 expression expression NOUN NN Number=Sing _ _ _ _ 24 of of ADP IN _ _ _ _ _ 25 other other ADJ JJ Degree=Pos _ _ _ _ 26 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 27 that that PRON WDT PronType=Rel _ _ _ _ 28 require require VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 29 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 30 but but CCONJ CC _ _ _ _ _ 31 not not ADV RB _ _ _ _ _ 32 NFAT Nfat ADV RB _ _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 12985 # text = Substitution of the optimized peptide sequence into the natural calcineurin docking site increased the calcineurin responsiveness of NFAT. 1 Substitution Substitution NOUN NN Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 optimized optimize ADJ JJ Degree=Pos _ _ _ _ 5 peptide peptide NOUN NN Number=Sing _ _ _ _ 6 sequence sequence NOUN NN Number=Sing _ _ _ _ 7 into into ADP IN _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 natural natural ADJ JJ Degree=Pos _ _ _ _ 10 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 11 docking docke NOUN NN Number=Sing _ _ _ _ 12 site site NOUN NN Number=Sing _ _ _ _ 13 increased increase VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 16 responsiveness responsiveness NOUN NN Number=Sing _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 NFAT NFAT PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 12986 # text = Compounds that interfere selectively with the calcineurin-NFAT interaction without affecting calcineurin phosphatase activity may be useful as therapeutic agents that are less toxic than current drugs. 1 Compounds compound NOUN NNS Number=Plur _ _ _ _ 2 that that PRON WDT PronType=Rel _ _ _ _ 3 interfere interfere VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 selectively selectively ADV RB _ _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 calcineurin- calcineurin- SYM NFP _ _ _ _ SpaceAfter=No 8 NFAT Nfat ADJ JJ Degree=Pos _ _ _ _ 9 interaction interaction NOUN NN Number=Sing _ _ _ _ 10 without without SCONJ IN _ _ _ _ _ 11 affecting affect VERB VBG VerbForm=Ger _ _ _ _ 12 calcineurin calcineurin NOUN NN Number=Sing _ _ _ _ 13 phosphatase phosphatase NOUN NN Number=Sing _ _ _ _ 14 activity activity NOUN NN Number=Sing _ _ _ _ 15 may may AUX MD VerbForm=Fin _ _ _ _ 16 be be AUX VB VerbForm=Inf _ _ _ _ 17 useful useful ADJ JJ Degree=Pos _ _ _ _ 18 as as SCONJ IN _ _ _ _ _ 19 therapeutic therapeutic ADJ JJ Degree=Pos _ _ _ _ 20 agents agent NOUN NNS Number=Plur _ _ _ _ 21 that that PRON WDT PronType=Rel _ _ _ _ 22 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 23 less less ADV RBR Degree=Cmp _ _ _ _ 24 toxic toxic ADJ JJ Degree=Pos _ _ _ _ 25 than than ADP IN _ _ _ _ _ 26 current current ADJ JJ Degree=Pos _ _ _ _ 27 drugs drug NOUN NNS Number=Plur _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 12987 # text = Document 0030013195 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013195 0030013195 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 12988 # text = Effects of prostaglandin E2 on Th0-type human T cell clones: modulation of functions of nuclear proteins involved in cytokine production. 1 Effects Effects NOUN NNS Number=Plur _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 prostaglandin prostaglandin NOUN NN Number=Sing _ _ _ _ 4 E2 E2 NUM CD NumType=Card _ _ _ _ 5 on on ADP IN _ _ _ _ _ 6 Th0 Th0 NUM CD NumType=Card _ _ _ SpaceAfter=No 7 - - PUNCT : _ _ _ _ SpaceAfter=No 8 type type NOUN NN Number=Sing _ _ _ _ 9 human human ADJ JJ Degree=Pos _ _ _ _ 10 T t PROPN NNP Number=Sing _ _ _ _ 11 cell cell NOUN NN Number=Sing _ _ _ _ 12 clones clone NOUN NNS Number=Plur _ _ _ SpaceAfter=No 13 : : PUNCT : _ _ _ _ _ 14 modulation modulation NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 functions function NOUN NNS Number=Plur _ _ _ _ 17 of of ADP IN _ _ _ _ _ 18 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 19 proteins protein NOUN NNS Number=Plur _ _ _ _ 20 involved involve ADJ JJ Degree=Pos _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 cytokine cytokine ADJ JJ Degree=Pos _ _ _ _ 23 production production NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 12989 # text = The effects of prostaglandin E2 (PGE2) on cytokine production and proliferation of the CD4+ human helper T cell clone SP-B21 were investigated. 1 The the DET DT Definite=Def|PronType=Art _ _ _ _ 2 effects effect NOUN NNS Number=Plur _ _ _ _ 3 of of ADP IN _ _ _ _ _ 4 prostaglandin prostaglandin NOUN NN Number=Sing _ _ _ _ 5 E2 E2 NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 PGE2 PGE2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 cytokine cytokine NOUN NN Number=Sing _ _ _ _ 11 production production NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 14 of of ADP IN _ _ _ _ _ 15 the the DET DT Definite=Def|PronType=Art _ _ _ _ 16 CD4 CD4 PROPN NNP Number=Sing _ _ _ SpaceAfter=No 17 + + SYM SYM _ _ _ _ _ 18 human human ADJ JJ Degree=Pos _ _ _ _ 19 helper helper NOUN NN Number=Sing _ _ _ _ 20 T t NOUN NN Number=Sing _ _ _ _ 21 cell cell NOUN NN Number=Sing _ _ _ _ 22 clone clone NOUN NN Number=Sing _ _ _ _ 23 SP sp NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 25 B21 b21 NOUN NN Number=Sing _ _ _ _ 26 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 27 investigated investigate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 28 . . PUNCT . _ _ _ _ _ # sent_id = 12990 # text = In cells stimulated with anti-CD3 mAb, PGE2 inhibited cell proliferation and the production of all the cytokines examined. 1 In in ADP IN _ _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 4 with with ADP IN _ _ _ _ _ 5 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 6 mAb mAb PROPN NNP Number=Sing _ _ _ SpaceAfter=No 7 , , PUNCT , _ _ _ _ _ 8 PGE2 PGE2 PART TO Abbr=Yes _ _ _ _ 9 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 10 cell cell NOUN NN Number=Sing _ _ _ _ 11 proliferation proliferation NOUN NN Number=Sing _ _ _ _ 12 and and CCONJ CC _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 production production NOUN NN Number=Sing _ _ _ _ 15 of of ADP IN _ _ _ _ _ 16 all all DET PDT _ _ _ _ _ 17 the the DET DT Definite=Def|PronType=Art _ _ _ _ 18 cytokines cytokine NOUN NNS Number=Plur _ _ _ _ 19 examined examin VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ SpaceAfter=No 20 . . PUNCT . _ _ _ _ _ # sent_id = 12991 # text = Addition of rIL-2 fully restored the proliferative response and partially restored the production of IL-4 and IL-5, but not that of other cytokines. 1 Addition Addition PROPN NNP Number=Sing _ _ _ _ 2 of of ADP IN _ _ _ _ _ 3 rIL rIL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 2 2 NUM CD NumType=Card _ _ _ _ 6 fully fully ADV RB _ _ _ _ _ 7 restored restore VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 proliferative proliferative ADJ JJ Degree=Pos _ _ _ _ 10 response response NOUN NN Number=Sing _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 partially partially ADV RB _ _ _ _ _ 13 restored restore VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 production production NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 4 4 NUM CD NumType=Card _ _ _ _ 20 and and CCONJ CC _ _ _ _ _ 21 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT , _ _ _ _ SpaceAfter=No 23 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 but but CCONJ CC _ _ _ _ _ 26 not not ADV RB _ _ _ _ _ 27 that that PRON DT Number=Sing|PronType=Dem _ _ _ _ 28 of of ADP IN _ _ _ _ _ 29 other other ADJ JJ Degree=Pos _ _ _ _ 30 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 31 . . PUNCT . _ _ _ _ _ # sent_id = 12992 # text = In contrast, in cells stimulated with phorbol myristate acetate (PMA)/A23187, PGE2 enhanced the production of IL-4 and IL-5, and only partially inhibited the production of other cytokines. 1 In in ADP IN _ _ _ _ _ 2 contrast contrast ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 3 , , PUNCT , _ _ _ _ _ 4 in in ADP IN _ _ _ _ _ 5 cells cell NOUN NNS Number=Plur _ _ _ _ 6 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 7 with with ADP IN _ _ _ _ _ 8 phorbol phorbol NOUN NN Number=Sing _ _ _ _ 9 myristate myristate NOUN NN Number=Sing _ _ _ _ 10 acetate acetate NOUN NN Number=Sing _ _ _ _ 11 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 12 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 13 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 14 /A23187 /A23187 NOUN NN Number=Sing _ _ _ SpaceAfter=No 15 , , PUNCT , _ _ _ _ _ 16 PGE2 PGE2 NUM CD NumType=Card _ _ _ _ 17 enhanced enhance VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 production production NOUN NN Number=Sing _ _ _ _ 20 of of ADP IN _ _ _ _ _ 21 IL IL PROPN NNP Number=Sing _ _ _ SpaceAfter=No 22 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 23 4 4 NUM CD NumType=Card _ _ _ _ 24 and and CCONJ CC _ _ _ _ _ 25 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 5 5 NUM CD NumType=Card _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 and and CCONJ CC _ _ _ _ _ 30 only only ADV RB _ _ _ _ _ 31 partially partially ADV RB _ _ _ _ _ 32 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 33 the the DET DT Definite=Def|PronType=Art _ _ _ _ 34 production production NOUN NN Number=Sing _ _ _ _ 35 of of ADP IN _ _ _ _ _ 36 other other ADJ JJ Degree=Pos _ _ _ _ 37 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 38 . . PUNCT . _ _ _ _ _ # sent_id = 12993 # text = Therefore, the effects of PGE2 vary depending on the mode of T cell activation, and the IL-4 and IL-5 are regulated differently from other cytokines. 1 Therefore therefore ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 effects effect NOUN NNS Number=Plur _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 PGE2 PGE2 NOUN NN Number=Sing _ _ _ _ 7 vary vary NOUN NN Number=Sing _ _ _ _ 8 depending depend VERB VBG VerbForm=Ger _ _ _ _ 9 on on ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 mode mode NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 T t PROPN NNP Number=Sing _ _ _ _ 14 cell cell NOUN NN Number=Sing _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ SpaceAfter=No 16 , , PUNCT , _ _ _ _ _ 17 and and CCONJ CC _ _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 IL Il NOUN NN Number=Sing _ _ _ SpaceAfter=No 20 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 21 4 4 NUM CD NumType=Card _ _ _ _ 22 and and CCONJ CC _ _ _ _ _ 23 IL Il PROPN NNP Number=Sing _ _ _ SpaceAfter=No 24 - - PUNCT , _ _ _ _ SpaceAfter=No 25 5 5 NUM CD NumType=Card _ _ _ _ 26 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 27 regulated regulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 28 differently differently ADV RB _ _ _ _ _ 29 from from ADP IN _ _ _ _ _ 30 other other ADJ JJ Degree=Pos _ _ _ _ 31 cytokines cytokine NOUN NNS Number=Plur _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 12994 # text = In a mobility shift assay, only the NF-kappa B (p50/p50) homodimer was observed in a complex formed with the kappa B sequence in unstimulated SP-B21 cells. 1 In in ADP IN _ _ _ _ _ 2 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 3 mobility mobility NOUN NN Number=Sing _ _ _ _ 4 shift shift NOUN NN Number=Sing _ _ _ _ 5 assay assay NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 only only ADV RB _ _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 NF Nf NOUN NN Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappa kappa NOUN NN Number=Sing _ _ _ _ 12 B b NOUN NN Number=Sing _ _ _ _ 13 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 14 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 15 / / SYM SYM _ _ _ _ SpaceAfter=No 16 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 17 ) ) PUNCT -RRB- _ _ _ _ _ 18 homodimer homodimer NOUN NN Number=Sing _ _ _ _ 19 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 20 observed observe VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 21 in in ADP IN _ _ _ _ _ 22 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 23 complex complex NOUN NN Number=Sing _ _ _ _ 24 formed form VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 the the DET DT Definite=Def|PronType=Art _ _ _ _ 27 kappa kappa NOUN NN Number=Sing _ _ _ _ 28 B b NOUN NN Number=Sing _ _ _ _ 29 sequence sequence NOUN NN Number=Sing _ _ _ _ 30 in in ADP IN _ _ _ _ _ 31 unstimulated unstimulated ADJ JJ Degree=Pos _ _ _ _ 32 SP sp PROPN NNP Number=Sing _ _ _ SpaceAfter=No 33 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 34 B b ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 35 21 21 NUM CD NumType=Card _ _ _ _ 36 cells cell NOUN NNS Number=Plur _ _ _ SpaceAfter=No 37 . . PUNCT . _ _ _ _ _ # sent_id = 12995 # text = When cells were stimulated with anti-CD3 mAb or PMA/A23187, a complex formation of NF-kappa B (p50/p65) heterodimer with the kappa B sequence was induced. 1 When when ADV WRB PronType=Int _ _ _ _ 2 cells cell NOUN NNS Number=Plur _ _ _ _ 3 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 4 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 5 with with ADP IN _ _ _ _ _ 6 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 7 mAb mAb PROPN NNP Number=Sing _ _ _ _ 8 or or CCONJ CC _ _ _ _ _ 9 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 / / PUNCT , _ _ _ _ SpaceAfter=No 11 A23187 A23187 NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 , , PUNCT , _ _ _ _ _ 13 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 14 complex complex ADJ JJ Degree=Pos _ _ _ _ 15 formation formation NOUN NN Number=Sing _ _ _ _ 16 of of ADP IN _ _ _ _ _ 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappa kappa NOUN NN Number=Sing _ _ _ _ 20 B b NOUN NN Number=Sing _ _ _ _ 21 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 22 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 23 / / SYM SYM _ _ _ _ SpaceAfter=No 24 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 25 ) ) PUNCT -RRB- _ _ _ _ _ 26 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 27 with with ADP IN _ _ _ _ _ 28 the the DET DT Definite=Def|PronType=Art _ _ _ _ 29 kappa kappa NOUN NN Number=Sing _ _ _ _ 30 B b NOUN NN Number=Sing _ _ _ _ 31 sequence sequence NOUN NN Number=Sing _ _ _ _ 32 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 33 induced induce VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 12996 # text = Interestingly, PGE2 or di-butyryl (Bt2)cAMP abolished the binding of NF-kappa B (p50/p65) heterodimer to the kappa B sequence in cells stimulated with anti-CD3 mAb but not with PMA/A23187. 1 Interestingly Interestingly ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 PGE2 PGE2 NUM CD NumType=Card _ _ _ _ 4 or or CCONJ CC _ _ _ _ _ 5 di-butyryl di-butyryl NOUN NN Number=Sing _ _ _ _ 6 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 7 Bt2 Bt2 NUM CD NumType=Card _ _ _ SpaceAfter=No 8 ) ) PUNCT -RRB- _ _ _ _ SpaceAfter=No 9 cAMP camp NOUN NN Number=Sing _ _ _ _ 10 abolished abolish VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 11 the the DET DT Definite=Def|PronType=Art _ _ _ _ 12 binding binding NOUN NN Number=Sing _ _ _ _ 13 of of ADP IN _ _ _ _ _ 14 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 15 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 16 kappa kappa NOUN NN Number=Sing _ _ _ _ 17 B b NOUN NN Number=Sing _ _ _ _ 18 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 19 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 20 / / SYM SYM _ _ _ _ SpaceAfter=No 21 p65 p65 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 ) ) PUNCT -RRB- _ _ _ _ _ 23 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 24 to to ADP IN _ _ _ _ _ 25 the the DET DT Definite=Def|PronType=Art _ _ _ _ 26 kappa kappa NOUN NN Number=Sing _ _ _ _ 27 B b NOUN NN Number=Sing _ _ _ _ 28 sequence sequence NOUN NN Number=Sing _ _ _ _ 29 in in ADP IN _ _ _ _ _ 30 cells cell NOUN NNS Number=Plur _ _ _ _ 31 stimulated stimulate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 32 with with ADP IN _ _ _ _ _ 33 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 34 mAb mAb NOUN NN Number=Sing _ _ _ _ 35 but but CCONJ CC _ _ _ _ _ 36 not not PART RB _ _ _ _ _ 37 with with ADP IN _ _ _ _ _ 38 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 39 /A /A PROPN NNP Number=Sing _ _ _ SpaceAfter=No 40 23187 23187 NUM CD NumType=Card _ _ _ SpaceAfter=No 41 . . PUNCT . _ _ _ _ _ # sent_id = 12997 # text = Our results suggest that the target of PGE2 action is a component in the signal transduction pathway leading to the activation of protein kinase C. 1 Our we PRON PRP$ Number=Plur|Person=1|Poss=Yes|PronType=Prs _ _ _ _ 2 results result NOUN NNS Number=Plur _ _ _ _ 3 suggest suggest VERB VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 4 that that SCONJ IN _ _ _ _ _ 5 the the DET DT Definite=Def|PronType=Art _ _ _ _ 6 target target NOUN NN Number=Sing _ _ _ _ 7 of of ADP IN _ _ _ _ _ 8 PGE2 PGE2 NUM CD NumType=Card _ _ _ _ 9 action action NOUN NN Number=Sing _ _ _ _ 10 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 11 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 12 component component NOUN NN Number=Sing _ _ _ _ 13 in in ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 signal signal NOUN NN Number=Sing _ _ _ _ 16 transduction transduction NOUN NN Number=Sing _ _ _ _ 17 pathway pathway NOUN NN Number=Sing _ _ _ _ 18 leading lead VERB VBG VerbForm=Ger _ _ _ _ 19 to to ADP IN _ _ _ _ _ 20 the the DET DT Definite=Def|PronType=Art _ _ _ _ 21 activation activation NOUN NN Number=Sing _ _ _ _ 22 of of ADP IN _ _ _ _ _ 23 protein protein NOUN NN Number=Sing _ _ _ _ 24 kinase kinase NOUN NN Number=Sing _ _ _ _ 25 C C PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 . . PUNCT . _ _ _ _ _ # sent_id = 12998 # text = However, the inhibition of the T cell activation signals by PGE2 is selective. 1 However however ADV RB _ _ _ _ SpaceAfter=No 2 , , PUNCT , _ _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 inhibition inhibition NOUN NN Number=Sing _ _ _ _ 5 of of ADP IN _ _ _ _ _ 6 the the DET DT Definite=Def|PronType=Art _ _ _ _ 7 T T PROPN NNP Number=Sing _ _ _ _ 8 cell cell NOUN NN Number=Sing _ _ _ _ 9 activation activation NOUN NN Number=Sing _ _ _ _ 10 signals signal NOUN NNS Number=Plur _ _ _ _ 11 by by ADP IN _ _ _ _ _ 12 PGE2 Pge2 NOUN NN Number=Sing _ _ _ _ 13 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 14 selective selective ADJ JJ Degree=Pos _ _ _ SpaceAfter=No 15 . . PUNCT . _ _ _ _ _ # sent_id = 12999 # text = PGE2 enhanced the complex formation with NF-AT, AP-1 and CLE0 sequences when the cells were activated by either anti-CD3 mAb or PMA/A23187 stimulation. 1 PGE2 PGE2 X LS _ _ _ _ _ 2 enhanced enhance VERB VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 3 the the DET DT Definite=Def|PronType=Art _ _ _ _ 4 complex complex ADJ JJ Degree=Pos _ _ _ _ 5 formation formation NOUN NN Number=Sing _ _ _ _ 6 with with ADP IN _ _ _ _ _ 7 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 8 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 9 AT at PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 , , PUNCT , _ _ _ _ _ 11 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 12 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 13 1 1 NUM CD NumType=Card _ _ _ _ 14 and and CCONJ CC _ _ _ _ _ 15 CLE0 CLE0 NUM CD NumType=Card _ _ _ _ 16 sequences sequence NOUN NNS Number=Plur _ _ _ _ 17 when when ADV WRB PronType=Int _ _ _ _ 18 the the DET DT Definite=Def|PronType=Art _ _ _ _ 19 cells cell NOUN NNS Number=Plur _ _ _ _ 20 were be AUX VBD Mood=Ind|Tense=Past|VerbForm=Fin _ _ _ _ 21 activated activate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 22 by by ADP IN _ _ _ _ _ 23 either either CCONJ CC _ _ _ _ _ 24 anti-CD3 anti-CD3 NUM CD NumType=Card _ _ _ _ 25 mAb mAb PROPN NNP Number=Sing _ _ _ _ 26 or or CCONJ CC _ _ _ _ _ 27 PMA PMA PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 /A23187 /A23187 NUM CD NumType=Card _ _ _ _ 29 stimulation stimulation NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 . . PUNCT . _ _ _ _ _ # sent_id = 13000 # text = It seems therefore that PGE2, by elevating cAMP levels, interferes with the activation pathway for NF-kappa B but not for NF-AT, AP-1 or CLE0 binding protein. 1 It it PRON PRP Case=Nom|Gender=Neut|Number=Sing|Person=3|PronType=Prs _ _ _ _ 2 seems seem VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 3 therefore therefore ADV RB _ _ _ _ _ 4 that that DET DT Number=Sing|PronType=Dem _ _ _ _ 5 PGE2 Pge2 NOUN NN Number=Sing _ _ _ SpaceAfter=No 6 , , PUNCT , _ _ _ _ _ 7 by by SCONJ IN _ _ _ _ _ 8 elevating elevat VERB VBG VerbForm=Ger _ _ _ _ 9 cAMP camp NOUN NN Number=Sing _ _ _ _ 10 levels level NOUN NNS Number=Plur _ _ _ SpaceAfter=No 11 , , PUNCT , _ _ _ _ _ 12 interferes interfere VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 13 with with ADP IN _ _ _ _ _ 14 the the DET DT Definite=Def|PronType=Art _ _ _ _ 15 activation activation NOUN NN Number=Sing _ _ _ _ 16 pathway pathway NOUN NN Number=Sing _ _ _ _ 17 for for ADP IN _ _ _ _ _ 18 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 19 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 20 kappa kappa NOUN NN Number=Sing _ _ _ _ 21 B b NOUN NN Number=Sing _ _ _ _ 22 but but CCONJ CC _ _ _ _ _ 23 not not ADV RB _ _ _ _ _ 24 for for ADP IN _ _ _ _ _ 25 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 26 - - PUNCT , _ _ _ _ SpaceAfter=No 27 AT AT NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 , , PUNCT , _ _ _ _ _ 29 AP ap NOUN NN Number=Sing _ _ _ SpaceAfter=No 30 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 31 1 1 NUM CD NumType=Card _ _ _ _ 32 or or CCONJ CC _ _ _ _ _ 33 CLE0 CLE0 NUM CD NumType=Card _ _ _ _ 34 binding bind VERB VBG VerbForm=Ger _ _ _ _ 35 protein protein NOUN NN Number=Sing _ _ _ SpaceAfter=No 36 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 13001 # text = Document 0030013198 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013198 0030013198 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n # newpar # sent_id = 13002 # text = Cell-to-cell contact activates the long terminal repeat of human immunodeficiency virus 1 through its kappaB motif. 1 Cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 to to ADP IN _ _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 contact contact NOUN NN Number=Sing _ _ _ _ 7 activates activate VERB VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 8 the the DET DT Definite=Def|PronType=Art _ _ _ _ 9 long long ADJ JJ Degree=Pos _ _ _ _ 10 terminal terminal NOUN NN Number=Sing _ _ _ _ 11 repeat repeat NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 15 virus virus NOUN NN Number=Sing _ _ _ _ 16 1 1 NUM CD NumType=Card _ _ _ _ 17 through through ADP IN _ _ _ _ _ 18 its its PRON PRP$ Gender=Neut|Number=Sing|Person=3|Poss=Yes|PronType=Prs _ _ _ _ 19 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 20 motif motif NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n # sent_id = 13003 # text = Cell-to-cell contact between peripheral blood lymphocytes and transfected human colonic carcinoma cell line HT29 activates transcription of the long terminal repeats (LTR) of human immunodeficiency virus. 1 Cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 to to ADP IN _ _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 contact contact NOUN NN Number=Sing _ _ _ _ 7 between between ADP IN _ _ _ _ _ 8 peripheral peripheral ADJ JJ Degree=Pos _ _ _ _ 9 blood blood NOUN NN Number=Sing _ _ _ _ 10 lymphocytes lymphocyte NOUN NNS Number=Plur _ _ _ _ 11 and and CCONJ CC _ _ _ _ _ 12 transfected transfect VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 13 human human ADJ JJ Degree=Pos _ _ _ _ 14 colonic colonic NOUN NN Number=Sing _ _ _ _ 15 carcinoma carcinoma NOUN NN Number=Sing _ _ _ _ 16 cell cell NOUN NN Number=Sing _ _ _ _ 17 line line NOUN NN Number=Sing _ _ _ _ 18 HT29 HT29 NUM CD NumType=Card _ _ _ _ 19 activates activate NOUN NNS Number=Plur _ _ _ _ 20 transcription transcription NOUN NN Number=Sing _ _ _ _ 21 of of ADP IN _ _ _ _ _ 22 the the DET DT Definite=Def|PronType=Art _ _ _ _ 23 long long ADJ JJ Degree=Pos _ _ _ _ 24 terminal terminal NOUN NN Number=Sing _ _ _ _ 25 repeats repeat NOUN NNS Number=Plur _ _ _ _ 26 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 27 LTR LTR PROPN NNP Number=Sing _ _ _ SpaceAfter=No 28 ) ) PUNCT -RRB- _ _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 human human ADJ JJ Degree=Pos _ _ _ _ 31 immunodeficiency immunodeficiency NOUN NN Number=Sing _ _ _ _ 32 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 33 . . PUNCT . _ _ _ _ _ # sent_id = 13004 # text = HIV-1 LTR transcription is controlled by a complex array of virus-encoded and cellular proteins. 1 HIV Hiv NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT : _ _ _ _ SpaceAfter=No 3 1 1 NUM CD NumType=Card _ _ _ _ 4 LTR Ltr NOUN NN Number=Sing _ _ _ _ 5 transcription transcription NOUN NN Number=Sing _ _ _ _ 6 is be AUX VBZ Mood=Ind|Number=Sing|Person=3|Tense=Pres|VerbForm=Fin _ _ _ _ 7 controlled controll VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 8 by by ADP IN _ _ _ _ _ 9 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 10 complex complex ADJ JJ Degree=Pos _ _ _ _ 11 array array NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 virus virus NOUN NN Number=Sing _ _ _ SpaceAfter=No 14 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 15 encoded encod ADJ JJ Degree=Pos _ _ _ _ 16 and and CCONJ CC _ _ _ _ _ 17 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 18 proteins protein NOUN NNS Number=Plur _ _ _ SpaceAfter=No 19 . . PUNCT . _ _ _ _ _ # sent_id = 13005 # text = Using various constructs expressing a lacZ reporter gene under the control of the intact or three deleted forms of HIV-1 LTR, we obtained evidence that the kappaB regulatory elements located in the U3 region are involved in cell-to-cell activation of HIV-1 LTR. 1 Using use VERB VBG VerbForm=Ger _ _ _ _ 2 various various ADJ JJ Degree=Pos _ _ _ _ 3 constructs construct NOUN NNS Number=Plur _ _ _ _ 4 expressing expresse VERB VBG VerbForm=Ger _ _ _ _ 5 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 6 lacZ lacZ PROPN NNP Number=Sing _ _ _ _ 7 reporter reporter NOUN NN Number=Sing _ _ _ _ 8 gene gene VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 9 under under ADP IN _ _ _ _ _ 10 the the DET DT Definite=Def|PronType=Art _ _ _ _ 11 control control NOUN NN Number=Sing _ _ _ _ 12 of of ADP IN _ _ _ _ _ 13 the the DET DT Definite=Def|PronType=Art _ _ _ _ 14 intact intact NOUN NN Number=Sing _ _ _ _ 15 or or CCONJ CC _ _ _ _ _ 16 three three NUM CD NumType=Card _ _ _ _ 17 deleted delet ADJ JJ Degree=Pos _ _ _ _ 18 forms form NOUN NNS Number=Plur _ _ _ _ 19 of of ADP IN _ _ _ _ _ 20 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 21 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 22 1 1 NUM CD NumType=Card _ _ _ _ 23 LTR Ltr NOUN NN Number=Sing _ _ _ SpaceAfter=No 24 , , PUNCT , _ _ _ _ _ 25 we we PRON PRP Case=Nom|Number=Plur|Person=1|PronType=Prs _ _ _ _ 26 obtained obtain VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 27 evidence evidence NOUN NN Number=Sing _ _ _ _ 28 that that SCONJ IN _ _ _ _ _ 29 the the DET DT Definite=Def|PronType=Art _ _ _ _ 30 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 31 regulatory regulatory ADJ JJ Degree=Pos _ _ _ _ 32 elements element NOUN NNS Number=Plur _ _ _ _ 33 located locate VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 34 in in ADP IN _ _ _ _ _ 35 the the DET DT Definite=Def|PronType=Art _ _ _ _ 36 U3 U3 NOUN NN Number=Sing _ _ _ _ 37 region region NOUN NN Number=Sing _ _ _ _ 38 are be AUX VBP Mood=Ind|Tense=Pres|VerbForm=Fin _ _ _ _ 39 involved involved ADJ JJ Degree=Pos _ _ _ _ 40 in in ADP IN _ _ _ _ _ 41 cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 42 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 43 to to ADP IN _ _ _ _ SpaceAfter=No 44 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 45 cell cell NOUN NN Number=Sing _ _ _ _ 46 activation activation NOUN NN Number=Sing _ _ _ _ 47 of of ADP IN _ _ _ _ _ 48 HIV HIV PROPN NNP Number=Sing _ _ _ SpaceAfter=No 49 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 50 1 1 NUM CD NumType=Card _ _ _ _ 51 LTR. LTR. NOUN NN Number=Sing _ _ _ _ # sent_id = 13006 # text = Cell-to-cell contact activates in vitro binding of the nuclear factor kappaB (NF-kappaB) p50/p65 heterodimer to an HIV-1 kappaB oligonucleotide. 1 Cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 to to ADP IN _ _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 contact contact NOUN NN Number=Sing _ _ _ _ 7 activates activate NOUN NNS Number=Plur _ _ _ _ 8 in in ADP IN _ _ _ _ _ 9 vitro vitro ADJ JJ Degree=Pos _ _ _ _ 10 binding binding NOUN NN Number=Sing _ _ _ _ 11 of of ADP IN _ _ _ _ _ 12 the the DET DT Definite=Def|PronType=Art _ _ _ _ 13 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 14 factor factor NOUN NN Number=Sing _ _ _ _ 15 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 16 ( ( PUNCT -LRB- _ _ _ _ SpaceAfter=No 17 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 18 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 19 kappaB kappaB PROPN NNP Number=Sing _ _ _ SpaceAfter=No 20 ) ) PUNCT -RRB- _ _ _ _ _ 21 p50 p50 NUM CD NumType=Card _ _ _ SpaceAfter=No 22 / / SYM SYM _ _ _ _ SpaceAfter=No 23 p65 p65 NUM CD NumType=Card _ _ _ _ 24 heterodimer heterodimer NOUN NN Number=Sing _ _ _ _ 25 to to ADP IN _ _ _ _ _ 26 an a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 HIV HIV NOUN NN Number=Sing _ _ _ SpaceAfter=No 28 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 29 1 1 NUM CD NumType=Card _ _ _ _ 30 kappaB kappab NOUN NN Number=Sing _ _ _ _ 31 oligonucleotide oligonucleotide NOUN NN Number=Sing _ _ _ SpaceAfter=No 32 . . PUNCT . _ _ _ _ _ # sent_id = 13007 # text = Cell-to-cell contact activation of NF-kappaB was only partially inhibited by 100 microM pyrrolidine dithiocarbamate and was not correlated with a significant decrease of cellular inhibitor kappaB alpha. 1 Cell cell NOUN NN Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 to to ADP IN _ _ _ _ SpaceAfter=No 4 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 5 cell cell NOUN NN Number=Sing _ _ _ _ 6 contact contact NOUN NN Number=Sing _ _ _ _ 7 activation activation NOUN NN Number=Sing _ _ _ _ 8 of of ADP IN _ _ _ _ _ 9 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 10 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 11 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 12 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 13 only only ADV RB _ _ _ _ _ 14 partially partially ADV RB _ _ _ _ _ 15 inhibited inhibit VERB VBN Tense=Past|VerbForm=Part _ _ _ _ 16 by by ADP IN _ _ _ _ _ 17 100 100 NUM CD NumType=Card _ _ _ _ 18 microM microm NUM CD NumType=Card _ _ _ _ 19 pyrrolidine pyrrolidine NOUN NN Number=Sing _ _ _ _ 20 dithiocarbamate dithiocarbamate NOUN NN Number=Sing _ _ _ _ 21 and and CCONJ CC _ _ _ _ _ 22 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 23 not not PART RB _ _ _ _ _ 24 correlated correlate VERB VBN Tense=Past|VerbForm=Part|Voice=Pass _ _ _ _ 25 with with ADP IN _ _ _ _ _ 26 a a DET DT Definite=Ind|PronType=Art _ _ _ _ 27 significant significant ADJ JJ Degree=Pos _ _ _ _ 28 decrease decrease NOUN NN Number=Sing _ _ _ _ 29 of of ADP IN _ _ _ _ _ 30 cellular cellular ADJ JJ Degree=Pos _ _ _ _ 31 inhibitor inhibitor NOUN NN Number=Sing _ _ _ _ 32 kappaB kappaB NOUN NN Number=Sing _ _ _ _ 33 alpha alpha NOUN NN Number=Sing _ _ _ SpaceAfter=No 34 . . PUNCT . _ _ _ _ _ # sent_id = 13008 # text = NF-kappaB nuclear activation was not detectable before 1 h after cell contact and was dependent on protein synthesis. 1 NF NF PROPN NNP Number=Sing _ _ _ SpaceAfter=No 2 - - PUNCT HYPH _ _ _ _ SpaceAfter=No 3 kappaB kappaB PROPN NNP Number=Sing _ _ _ _ 4 nuclear nuclear ADJ JJ Degree=Pos _ _ _ _ 5 activation activation NOUN NN Number=Sing _ _ _ _ 6 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 7 not not PART RB _ _ _ _ _ 8 detectable detectable ADJ JJ Degree=Pos _ _ _ _ 9 before before ADP IN _ _ _ _ _ 10 1 1 NUM CD NumType=Card _ _ _ _ 11 h h NOUN NN Number=Sing _ _ _ _ 12 after after ADP IN _ _ _ _ _ 13 cell cell NOUN NN Number=Sing _ _ _ _ 14 contact contact NOUN NN Number=Sing _ _ _ _ 15 and and CCONJ CC _ _ _ _ _ 16 was be AUX VBD Mood=Ind|Number=Sing|Person=3|Tense=Past|VerbForm=Fin _ _ _ _ 17 dependent dependent ADJ JJ Degree=Pos _ _ _ _ 18 on on ADP IN _ _ _ _ _ 19 protein protein NOUN NN Number=Sing _ _ _ _ 20 synthesis synthesis NOUN NN Number=Sing _ _ _ SpaceAfter=No 21 . . PUNCT . _ _ _ _ SpacesAfter=\s\n\n\n # newpar # sent_id = 13009 # text = Document 0030013199 ends. 1 Document document NOUN NN Number=Sing _ _ _ _ 2 0030013199 0030013199 NUM CD NumType=Card _ _ _ _ 3 ends end NOUN NNS Number=Plur _ _ _ SpaceAfter=No 4 . . PUNCT . _ _ _ _ SpacesAfter=\n\n\n